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Sample records for geometric deformable models

  1. A geometric deformable model for echocardiographic image segmentation

    NASA Technical Reports Server (NTRS)

    Hang, X.; Greenberg, N. L.; Thomas, J. D.

    2002-01-01

    Gradient vector flow (GVF), an elegant external force for parametric deformable models, can capture object boundaries from both sides. A new geometric deformable model is proposed that combines GVF and the geodesic active contour model. The level set method is used as the numerical method of this model. The model is applied for echocardiographic image segmentation.

  2. Deformations of Geometric Structures in Topological Sigma Models

    SciTech Connect

    Bytsenko, A. A.

    2010-11-25

    We study a Lie algebra of formal vector fields W{sub n} with it application to the perturbative deformed holomorphic symplectic structure in the A-model, and a Calabi-Yau manifold with boundaries in the B-model. We show that equivalent classes of deformations are described by a Hochschild cohomology of the DG-algebra A = (A,Q), Q = {partial_derivative}-bar+{partial_derivative}{sub deform,} which is defined to be the cohomology of (-1){sup n}Q+d{sub Hoch}. Here {partial_derivative}-bar is the initial non-deformed BRST operator while {partial_derivative}{sub deform} is the deformed part whose algebra is a Lie algebra of linear vector fields gl{sub n}.

  3. 3D geometrical modelling of post-foliation deformations in metamorphic terrains (Syros, Cyclades, Greece)

    NASA Astrophysics Data System (ADS)

    Philippon, Mélody; Le Carlier de Veslud, Christian; Gueydan, Frédéric; Brun, Jean-Pierre; Caumon, Guillaume

    2015-09-01

    Superposed to ductile syn-metamorphic deformations, post-foliation deformations affect metamorphic units during their exhumation. Understanding the role of such deformations in the structuration of metamorphic units is key for understanding the tectonic evolution of convergence zones. We characterize post-foliations deformations using 3D modelling which is a first-order tool to describe complex geological structures, but a challenging task where based only on surface data. We propose a modelling procedure that combines fast draft models (interpolation of orientation data), with more complex ones where the structural context is better understood (implicit modelling), allowing us to build a 3D geometrical model of Syros Island blueschists (Cyclades), based on field data. With our approach, the 3D model is able to capture the complex present-day geometry of the island, mainly controlled by the superposition of three types of post-metamorphic deformations affecting the original metamorphic pile: i) a top-to-South ramp-flat extensional system that dominates the overall island structure, ii) large-scale folding of the metamorphic units associated with ramp-flat extensional system, and iii) steeply-dipping normal faults trending dominantly NNW-SSE and EW. The 3D surfaces produced by this method match outcrop data, are geologically consistent, and provide reasonable estimates of geological structures in poorly constrained areas.

  4. Forward dynamics simulation of human figures on assistive devices using geometric skin deformation model.

    PubMed

    Yoshiyasu, Yusuke; Ayusawa, Ko; Yoshida, Eiichi; Matsumoto, Yoshio; Endo, Yui

    2015-01-01

    We present a forward dynamics (FD) simulation technique for human figures when they are supported by assistive devices. By incorporating a geometric skin deformation model, called linear blend skinning (skinning), into rigid-body skeleton dynamics, we can model a time-varying geometry of body surface plausibly and efficiently. Based on the skinning model, we also derive a Jacobian (a linear mapping) that maps contact forces exerted on the skin to joint torques, which is the main technical contribution of this paper. This algorithm allows us to efficiently simulate dynamics of human body that interacts with assistive devices. Experimental results showed that the proposed approach can generate plausible motions and can estimate pressure distribution that is roughly comparable to the tactile sensor data.

  5. Deformation Prediction and Geometrical Modeling of Head and Neck Cancer Tumor: A Data Mining Approach

    NASA Astrophysics Data System (ADS)

    Azimi, Maryam

    Radiation therapy has been used in the treatment of cancer tumors for several years and many cancer patients receive radiotherapy. It may be used as primary therapy or with a combination of surgery or other kinds of therapy such as chemotherapy, hormone therapy or some mixture of the three. The treatment objective is to destroy cancer cells or shrink the tumor by planning an adequate radiation dose to the desired target without damaging the normal tissues. By using the pre-treatment Computer Tomography (CT) images, most of the radiotherapy planning systems design the target and assume that the size of the tumor will not change throughout the treatment course, which takes 5 to 7 weeks. Based on this assumption, the total amount of radiation is planned and fractionated for the daily dose required to be delivered to the patient's body. However, this assumption is flawed because the patients receiving radiotherapy have marked changes in tumor geometry during the treatment period. Therefore, there is a critical need to understand the changes of the tumor shape and size over time during the course of radiotherapy in order to prevent significant effects of inaccuracy in the planning. In this research, a methodology is proposed in order to monitor and predict daily (fraction day) tumor volume and surface changes of head and neck cancer tumors during the entire treatment period. In the proposed method, geometrical modeling and data mining techniques will be used rather than repetitive CT scans data to predict the tumor deformation for radiation planning. Clinical patient data were obtained from the University of Texas-MD Anderson Cancer Center (MDACC). In the first step, by using CT scan data, the tumor's progressive geometric changes during the treatment period are quantified. The next step relates to using regression analysis in order to develop predictive models for tumor geometry based on the geometric analysis results and the patients' selected attributes (age, weight

  6. Segmentation of interest region in medical volume images using geometric deformable model.

    PubMed

    Lee, Myungeun; Cho, Wanhyun; Kim, Sunworl; Park, Soonyoung; Kim, Jong Hyo

    2012-05-01

    In this paper, we present a new segmentation method using the level set framework for medical volume images. The method was implemented using the surface evolution principle based on the geometric deformable model and the level set theory. And, the speed function in the level set approach consists of a hybrid combination of three integral measures derived from the calculus of variation principle. The terms are defined as robust alignment, active region, and smoothing. These terms can help to obtain the precise surface of the target object and prevent the boundary leakage problem. The proposed method has been tested on synthetic and various medical volume images with normal tissue and tumor regions in order to evaluate its performance on visual and quantitative data. The quantitative validation of the proposed segmentation is shown with higher Jaccard's measure score (72.52%-94.17%) and lower Hausdorff distance (1.2654 mm-3.1527 mm) than the other methods such as mean speed (67.67%-93.36% and 1.3361mm-3.4463 mm), mean-variance speed (63.44%-94.72% and 1.3361 mm-3.4616 mm), and edge-based speed (0.76%-42.44% and 3.8010 mm-6.5389 mm). The experimental results confirm that the effectiveness and performance of our method is excellent compared with traditional approaches. PMID:22402196

  7. The minimal geometric deformation approach extended

    NASA Astrophysics Data System (ADS)

    Casadio, R.; Ovalle, J.; da Rocha, Roldão

    2015-11-01

    The minimal geometric deformation approach was introduced in order to study the exterior spacetime around spherically symmetric self-gravitating systems, such as stars or similar astrophysical objects, in the Randall-Sundrum brane-world framework. A consistent extension of this approach is developed here, which contains modifications of both the time component and the radial component of a spherically symmetric metric. A modified Schwarzschild geometry is obtained as an example of its simplest application, and a new solution that is potentially useful to describe stars in the brane-world is also presented.

  8. Nonlinear estimation of geometric parameters in FEMs of volcano deformation: Integrating tomography models and geodetic data for Okmok volcano, Alaska

    NASA Astrophysics Data System (ADS)

    Masterlark, Timothy; Feigl, Kurt L.; Haney, Matthew; Stone, Jonathan; Thurber, Clifford; Ronchin, Erika

    2012-02-01

    The internal structure, loading processes, and effective boundary conditions of a volcano control the deformation observed at the Earth's surface. Using finite element models (FEMs), we simulate the response due to a pressurized magma chamber embedded in a domain having a distribution of elastic material properties. We present the Pinned Mesh Perturbation method (PMP) to automate the mesh generation process in response to perturbations of the position of a simulated magma chamber within an FEM domain. Using InSAR-observed deformation for the 1997 eruption of Okmok volcano, Alaska, as an example, we combine PMP with nested Monte Carlo methods to estimate a set of linear and nonlinear parameters that characterize the depressurization and location of the magma chamber beneath Okmok's caldera. The three-dimensional FEMs used in the PMP method simulate the distribution of material properties of tomography models and account for the irregular geometry of the topography and bathymetry. The estimated depth of an assumed spherical magma chamber is 3527-54+55 m below sea level and is sensitive to the distribution of material properties. This depth is consistent with lithostatic pressure constraints and very long period tremor observations. The fit of this FEM to the InSAR data is a significant improvement, at the 95% confidence level, compared to the fit of a corresponding FEM having homogeneous material properties. The methods presented here allow us to construct deformation models that integrate tomography models with geodetic observations, in an effort to achieve a deeper understanding of active volcanoes.

  9. Significance of geometrical relationships between low-temperature intracrystalline deformation microstructures in naturally deformed quartz

    NASA Astrophysics Data System (ADS)

    Derez, T.; Pennock, G.; Drury, M. R.; Sintubin, M.

    2013-12-01

    Although quartz is one of the most studied minerals in the Earth's crust when it comes to its rheology, the interpretation of intracrystalline deformation microstructures with respect to deformation conditions and mechanisms, remains highly contentious. Moreover, inconsistent use of terminology for both deformation microstructures and mechanisms makes a correct assessment of observations and interpretations in published material very difficult. With respect to low-temperature intracrystalline deformation microstructures in quartz, different conflicting genetic models have been proposed. Most probably, the lack of consensus means that there is no unique interpretation for these microstructures, primarily because their initiation and development depend on many ambient conditions. We extensively studied these intracrystalline deformation microstructures by means of optical microscopy, Hot-Cathodoluminescence, SEM-Cathodoluminescence and Electron Backscatter Diffraction Orientation Imaging, in vein quartz of the High-Ardenne slate belt (Belgium, France, Luxemburg, Germany), (de)formed in a low-temperature regime. Firstly, we propose a new, purely descriptive terminology for the low-temperature intracrystalline deformation microstructures in naturally deformed quartz: fine extinction bands (FEB), wide extinction bands (WEB) and strings. The strings can be further subdivided into blocky (BS), straight (SS) and recrystallised (RS) morphological types. FEBs have consistently been called deformation lamellae in quartz and planar slip bands in metals. WEBs have been called deformation bands, prismatic kink bands or type II kink bands. Strings have formerly been called shear bands, deformation bands or type I kink bands. No distinction between blocky and straight morphological string types had ever been made. Secondly, a survey of the pre-recrystallisation stages in the history of the intracrystalline deformation microstructures reveals that the different types of low

  10. Descriptive Geometry and Geometric Modeling.

    ERIC Educational Resources Information Center

    Adams, J. Alan

    1988-01-01

    Describes experiences for engineering students to develop spatial awareness and reasoning capability. Describes geometric modeling, basic geometric concepts, operations, surface modeling, and conclusions. (YP)

  11. The effect of electron beam geometric deformation errors on the small-signal characteristic of ECRM

    NASA Astrophysics Data System (ADS)

    Yongjian, Yu

    1993-08-01

    In this paper is studied the effect of electron beam geometric deformation errors on the small — signal characteristics of the TE{mn/o} mode Electron Cyclotron Resonance Maser (ECRM), based on the elliptically cross—sectional e—beam deformation model. As an example, the effect of small geometric deformation errors on the TE{01/o} mode fundamental ECRM coupling coefficient is quantitatively shown.

  12. Pragmatic geometric model evaluation

    NASA Astrophysics Data System (ADS)

    Pamer, Robert

    2015-04-01

    Quantification of subsurface model reliability is mathematically and technically demanding as there are many different sources of uncertainty and some of the factors can be assessed merely in a subjective way. For many practical applications in industry or risk assessment (e. g. geothermal drilling) a quantitative estimation of possible geometric variations in depth unit is preferred over relative numbers because of cost calculations for different scenarios. The talk gives an overview of several factors that affect the geometry of structural subsurface models that are based upon typical geological survey organization (GSO) data like geological maps, borehole data and conceptually driven construction of subsurface elements (e. g. fault network). Within the context of the trans-European project "GeoMol" uncertainty analysis has to be very pragmatic also because of different data rights, data policies and modelling software between the project partners. In a case study a two-step evaluation methodology for geometric subsurface model uncertainty is being developed. In a first step several models of the same volume of interest have been calculated by omitting successively more and more input data types (seismic constraints, fault network, outcrop data). The positions of the various horizon surfaces are then compared. The procedure is equivalent to comparing data of various levels of detail and therefore structural complexity. This gives a measure of the structural significance of each data set in space and as a consequence areas of geometric complexity are identified. These areas are usually very data sensitive hence geometric variability in between individual data points in these areas is higher than in areas of low structural complexity. Instead of calculating a multitude of different models by varying some input data or parameters as it is done by Monte-Carlo-simulations, the aim of the second step of the evaluation procedure (which is part of the ongoing work) is to

  13. Nonlinear estimation of geometric parameters in finite element models of volcano deformation: Application to the 1997 eruption of Okmok volcano, Alaska.

    NASA Astrophysics Data System (ADS)

    Masterlark, T.; Feigl, K.; Haney, M. M.; Stone, J.; Thurber, C. H.; Ronchin, E.

    2011-12-01

    The internal structure, loading processes, and effective boundary conditions of a volcano control the deformation observed at the Earth's surface. Using finite element models, we simulate the response due to a pressurized magma chamber embedded in a domain having an arbitrary geometry and distribution of elastic material properties. The ability to impose perturbations of the source position and automatically generate an acceptable mesh has been an obstacle to implementing nonlinear inverse analyses of geodetic data to estimate the position of a magma chamber within the mesh of a finite element model. We use the Pinned Mesh Perturbation method (PMP) to automatically generate the mesh following perturbations to geometric parameters such as the depth of the source. For example, we analyze the 1997 eruption of Okmok volcano, Alaska. To describe the co-eruptive deformation field observed by synthetic aperture radar interferometry (InSAR), we solve a nonlinear inverse problem by combining PMP with nested Monte Carlo methods. The solution yields estimates and uncertainties for parameters that characterize the depressurization and location of the magma chamber beneath Okmok's caldera. The three-dimensional finite element models used in the PMP method simulate the heterogeneous distribution of material properties derived from seismic tomography and account for the irregular geometry of the topography and bathymetry. The fit of this heterogeneous configuration to the InSAR data is a significant improvement, at the 95% confidence level, compared to the fit of a corresponding finite element model having homogeneous material properties. The estimated depth of an assumed spherical magma chamber, embedded in a domain having a heterogeneous distribution of material properties, is 3530 +/- 30 m with respect to mean sea level. This estimated depth is consistent with constraints from rock mechanics and very-long-period tremor. The methods presented here allow us to construct

  14. Iris-based medical analysis by geometric deformation features.

    PubMed

    Ma, Lin; Zhang, D; Li, Naimin; Cai, Yan; Zuo, Wangmeng; Wang, Kuanguan

    2013-01-01

    Iris analysis studies the relationship between human health and changes in the anatomy of the iris. Apart from the fact that iris recognition focuses on modeling the overall structure of the iris, iris diagnosis emphasizes the detecting and analyzing of local variations in the characteristics of irises. This paper focuses on studying the geometrical structure changes in irises that are caused by gastrointestinal diseases, and on measuring the observable deformations in the geometrical structures of irises that are related to roundness, diameter and other geometric forms of the pupil and the collarette. Pupil and collarette based features are defined and extracted. A series of experiments are implemented on our experimental pathological iris database, including manual clustering of both normal and pathological iris images, manual classification by non-specialists, manual classification by individuals with a medical background, classification ability verification for the proposed features, and disease recognition by applying the proposed features. The results prove the effectiveness and clinical diagnostic significance of the proposed features and a reliable recognition performance for automatic disease diagnosis. Our research results offer a novel systematic perspective for iridology studies and promote the progress of both theoretical and practical work in iris diagnosis. PMID:23144041

  15. Geometric correction of deformed chromosomes for automatic Karyotyping.

    PubMed

    Khan, Shadab; DSouza, Alisha; Sanches, João; Ventura, Rodrigo

    2012-01-01

    Automatic Karyotyping is the process of classifying chromosomes from an unordered karyogram into their respective classes to create an ordered karyogram. Automatic karyotyping algorithms typically perform geometrical correction of deformed chromosomes for feature extraction; these features are used by classifier algorithms for classifying the chromosomes. Karyograms of bone marrow cells are known to have poor image quality. An example of such karyograms is the Lisbon-K(1) (LK(1)) dataset that is used in our work. Thus, to correct the geometrical deformation of chromosomes from LK(1), a robust method to obtain the medial axis of the chromosome was necessary. To address this problem, we developed an algorithm that uses the seed points to make a primary prediction. Subsequently, the algorithm computes the distance of boundary from the predicted point, and the gradients at algorithm-specified points on the boundary to compute two auxiliary predictions. Primary prediction is then corrected using auxiliary predictions, and a final prediction is obtained to be included in the seed region. A medial axis is obtained this way, which is further used for geometrical correction of the chromosomes. This algorithm was found capable of correcting geometrical deformations in even highly distorted chromosomes with forked ends.

  16. Extending the geometric deformation: New black hole solutions

    NASA Astrophysics Data System (ADS)

    Ovalle, Jorge

    2016-03-01

    By using the extension of the Minimal Geometric Deformation approach, recently developed to investigate the exterior spacetime of a self-gravitating system in the Braneworld, we identified a master solution for the deformation undergone by the radial metric component when time deformations are produced by bulk gravitons. A specific form for the temporal deformation is used to generate a new exterior solution with a tidal charge Q. The main feature of this solution is the presence of higher-order terms in the tidal charge, thus generalizing the well known tidally charged solution. The horizon of the black hole lies inside the Schwarzschild radius, h < rs = 2ℳ, indicating that extra-dimensional effects weaken the gravitational field.

  17. Geometrical modelling of textile reinforcements

    NASA Technical Reports Server (NTRS)

    Pastore, Christopher M.; Birger, Alexander B.; Clyburn, Eugene

    1995-01-01

    The mechanical properties of textile composites are dictated by the arrangement of yarns contained with the material. Thus to develop a comprehensive understanding of the performance of these materials, it is necessary to develop a geometrical model of the fabric structure. This task is quite complex, as the fabric is made form highly flexible yarn systems which experience a certain degree of compressability. Furthermore there are tremendous forces acting on the fabric during densification typically resulting in yarn displacement and misorientation. The objective of this work is to develop a methodology for characterizing the geometry of yarns within a fabric structure including experimental techniques for evaluating these models. Furthermore, some applications of these geometric results to mechanical prediction models are demonstrated. Although more costly than its predecessors, the present analysis is based on the detailed architecture developed by one of the authors and his colleagues and accounts for many of the geometric complexities that other analyses ignore.

  18. Geometric Electron Models.

    ERIC Educational Resources Information Center

    Nika, G. Gerald; Parameswaran, R.

    1997-01-01

    Describes a visual approach for explaining the filling of electrons in the shells, subshells, and orbitals of the chemical elements. Enables students to apply the principles of atomic electron configuration while using manipulatives to model the building up of electron configurations as the atomic numbers of elements increase on the periodic…

  19. Geometrical modelling of textile reinforcements

    NASA Technical Reports Server (NTRS)

    Pastore, Christopher M.; Birger, Alexander B.; Clyburn, Eugene

    1995-01-01

    The mechanical properties of textile composites are dictated by the arrangement of yarns contained within the material. Thus, to develop a comprehensive understanding of the performance of these materials, it is necessary to develop a geometrical model of the fabric structure. This task is quite complex, as the fabric is made from highly flexible yarn systems which experience a certain degree of compressibility. Furthermore there are tremendous forces acting on the fabric during densification typically resulting in yarn displacement and misorientation. The objective of this work is to develop a methodology for characterizing the geometry of yarns within a fabric structure including experimental techniques for evaluating these models. Furthermore, some applications of these geometric results to mechanical property predictions models are demonstrated.

  20. Geometrical and transport properties of Bentheimer sandstone under deformation

    NASA Astrophysics Data System (ADS)

    Jasinski, Lukasz; Thovert, Jean Francois; Mourzenko, Valeri; Gland, Nicolas; Youssef, Souhail; Vizika, Olga; Adler, Pierre

    2010-05-01

    During industrial, geoscientific or environmental drilling campaigns, rock samples are often extracted few km below surface under large pressures p and their in situ properties may significantly differ from the ones measured in the lab close to atmospheric pressure p_a. Our first objective is to derive from measurements made at pa the geometric and transport properties at p. In petroleum industry, during production, the vertical effective stress in the reservoir increases as the pore pressure decreases from few hundreds to few tens bar; in average the horizontal effective stress increases as well, but at a lower rate along an oedometric path, favoring shear stress and reservoir depletion; a complex geology induces locally a variety of stress paths between the two extreme hydrostatic and uniaxial paths. For storage, CO2 might be injected into deep geological formations; such a re-injection will decrease the effective stress. Therefore, our second objective is to test numerically the sensitivity of transport properties to stress path. The methodology can be summarized as follows. First, the rock geometry on the pore scale is obtained by microtomography. The major geometric characteristics are derived by extracting the pore skeleton. Second, the sample is submitted to hydrostatic, oedometric or uniaxial deformations. Then, the permeability K is derived by routines based on finite volume discretization operating on cubic or on unstructured tetrahedral elements. This methodology is applied to a real Bentheimer sandstone of porosity E close to 0.23-0.24. It is binarized with 5003 and 10003 voxels equal to 6 and 3 microns. E, the correlation function, the specific area, the hydraulic radius, the skeleton and the percolation properties of the pore space are calculated. The influence of various boundary conditions on K in the uncompressed sample is studied; K is slightly anisotropic. Then, the sample is submitted to the overall deformations and the influence of the loading

  1. Geometrical and transport properties of Bentheimer sandstone under deformation

    NASA Astrophysics Data System (ADS)

    Jasinski, L.; Mourzenko, V.; Thovert, J.; Gland, N.; Youssef, S.; Vizika, O.; Adler, P. M.

    2009-12-01

    During industrial, geoscientific or environmental drilling campaigns, rock samples are often extracted few km below surface under large pressures p and their in situ properties may significantly differ from the ones measured in the lab close to atmospheric pressure p_a. Our first objective is to derive from measurements made at p_a the geometric and transport properties at p. In petroleum industry, during production, the vertical effective stress in the reservoir increases as the pore pressure decreases from few hundreds to few tens bar; in average the horizontal effective stress increases as well, but at a lower rate along an oedometric path, favoring shear stress and reservoir depletion; a complex geology induces locally a variety of stress paths between the two extreme hydrostatic and uniaxial paths. For storage, CO2 might be injected into deep geological formations; such a re-injection will decrease the effective stress. Therefore, our second objective is to test numerically the sensitivity of transport properties to stress path. The methodology can be summarized as follows. First, the rock geometry on the pore scale is obtained by microtomography. The major geometric characteristics are derived by extracting the pore skeleton. Second, the sample is submitted to hydrostatic, oedometric or uniaxial deformations. Then, the permeability K is derived by routines based on finite volume discretization operating on cubic or on unstructured tetrahedral elements. This methodology is applied to a real Bentheimer sandstone of porosity E close to 0.23-0.24. It is binarized with 500^3 and 1000^3 voxels equal to 6 and 3 microns. E, the correlation function, the specific area, the hydraulic radius, the skeleton and the percolation properties of the pore space are calculated. The influence of various boundary conditions on K in the uncompressed sample is studied; K is slightly anisotropic. Then, the sample is submitted to the overall deformations and the influence of the

  2. 4-D facial expression recognition by learning geometric deformations.

    PubMed

    Ben Amor, Boulbaba; Drira, Hassen; Berretti, Stefano; Daoudi, Mohamed; Srivastava, Anuj

    2014-12-01

    In this paper, we present an automatic approach for facial expression recognition from 3-D video sequences. In the proposed solution, the 3-D faces are represented by collections of radial curves and a Riemannian shape analysis is applied to effectively quantify the deformations induced by the facial expressions in a given subsequence of 3-D frames. This is obtained from the dense scalar field, which denotes the shooting directions of the geodesic paths constructed between pairs of corresponding radial curves of two faces. As the resulting dense scalar fields show a high dimensionality, Linear Discriminant Analysis (LDA) transformation is applied to the dense feature space. Two methods are then used for classification: 1) 3-D motion extraction with temporal Hidden Markov model (HMM) and 2) mean deformation capturing with random forest. While a dynamic HMM on the features is trained in the first approach, the second one computes mean deformations under a window and applies multiclass random forest. Both of the proposed classification schemes on the scalar fields showed comparable results and outperformed earlier studies on facial expression recognition from 3-D video sequences.

  3. Postbuckling analysis of shear deformable composite flat panels taking into account geometrical imperfections

    NASA Technical Reports Server (NTRS)

    Librescu, L.; Stein, M.

    1990-01-01

    The effects of initial geometrical imperfections on the postbuckling response of flat laminated composite panels to uniaxial and biaxial compressive loading are investigated analytically. The derivation of the mathematical model on the basis of first-order transverse shear deformation theory is outlined, and numerical results for perfect and imperfect, single-layer and three-layer square plates with free-free, clamped-clamped, or free-clamped edges are presented in graphs and briefly characterized. The present approach is shown to be more accurate than analyses based on the classical Kirchhoff plate model.

  4. Tensor3D: A computer graphics program to simulate 3D real-time deformation and visualization of geometric bodies

    NASA Astrophysics Data System (ADS)

    Pallozzi Lavorante, Luca; Dirk Ebert, Hans

    2008-07-01

    Tensor3D is a geometric modeling program with the capacity to simulate and visualize in real-time the deformation, specified through a tensor matrix and applied to triangulated models representing geological bodies. 3D visualization allows the study of deformational processes that are traditionally conducted in 2D, such as simple and pure shears. Besides geometric objects that are immediately available in the program window, the program can read other models from disk, thus being able to import objects created with different open-source or proprietary programs. A strain ellipsoid and a bounding box are simultaneously shown and instantly deformed with the main object. The principal axes of strain are visualized as well to provide graphical information about the orientation of the tensor's normal components. The deformed models can also be saved, retrieved later and deformed again, in order to study different steps of progressive strain, or to make this data available to other programs. The shape of stress ellipsoids and the corresponding Mohr circles defined by any stress tensor can also be represented. The application was written using the Visualization ToolKit, a powerful scientific visualization library in the public domain. This development choice, allied to the use of the Tcl/Tk programming language, which is independent on the host computational platform, makes the program a useful tool for the study of geometric deformations directly in three dimensions in teaching as well as research activities.

  5. Elastic scattering in geometrical model

    NASA Astrophysics Data System (ADS)

    Plebaniak, Zbigniew; Wibig, Tadeusz

    2016-10-01

    The experimental data on proton-proton elastic and inelastic scattering emerging from the measurements at the Large Hadron Collider, calls for an efficient model to fit the data. We have examined the optical, geometrical picture and we have found the simplest, linear dependence of this model parameters on the logarithm of the interaction energy with the significant change of the respective slopes at one point corresponding to the energy of about 300 GeV. The logarithmic dependence observed at high energies allows one to extrapolate the proton-proton elastic, total (and inelastic) cross sections to ultra high energies seen in cosmic rays events which makes a solid justification of the extrapolation to very high energy domain of cosmic rays and could help us to interpret the data from an astrophysical and a high energy physics point of view.

  6. Phenomenological modeling of geometric metasurfaces.

    PubMed

    Ye, Weimin; Guo, Qinghua; Xiang, Yuanjiang; Fan, Dianyuan; Zhang, Shuang

    2016-04-01

    Metasurfaces, with their superior capability in manipulating the optical wavefront at the subwavelength scale and low manufacturing complexity, have shown great potential for planar photonics and novel optical devices. However, vector field simulation of metasurfaces is so far limited to periodic-structured metasurfaces containing a small number of meta-atoms in the unit cell by using full-wave numerical methods. Here, focusing on achiral meta-atoms only with electric polarizability and thickness far less than the wavelength of light, and ignoring the coupling between meta-atoms, we propose a general phenomenological method to analytically model the metasurfaces based on the assumption that the meta-atoms possess localized resonances with Lorentz-Drude forms, whose exact form can be retrieved from the full wave simulation of a single element. Applied to phase modulated geometric metasurfaces constituted by identical meta-atoms with different orientations, our analytical results show good agreement with full-wave numerical simulations. The proposed theory provides an efficient method to model and design optical devices based on metasurfaces.

  7. Phenomenological modeling of geometric metasurfaces.

    PubMed

    Ye, Weimin; Guo, Qinghua; Xiang, Yuanjiang; Fan, Dianyuan; Zhang, Shuang

    2016-04-01

    Metasurfaces, with their superior capability in manipulating the optical wavefront at the subwavelength scale and low manufacturing complexity, have shown great potential for planar photonics and novel optical devices. However, vector field simulation of metasurfaces is so far limited to periodic-structured metasurfaces containing a small number of meta-atoms in the unit cell by using full-wave numerical methods. Here, focusing on achiral meta-atoms only with electric polarizability and thickness far less than the wavelength of light, and ignoring the coupling between meta-atoms, we propose a general phenomenological method to analytically model the metasurfaces based on the assumption that the meta-atoms possess localized resonances with Lorentz-Drude forms, whose exact form can be retrieved from the full wave simulation of a single element. Applied to phase modulated geometric metasurfaces constituted by identical meta-atoms with different orientations, our analytical results show good agreement with full-wave numerical simulations. The proposed theory provides an efficient method to model and design optical devices based on metasurfaces. PMID:27137005

  8. Geometric effects in the electronic transport of deformed nanotubes

    NASA Astrophysics Data System (ADS)

    Santos, Fernando; Fumeron, Sébastien; Berche, Bertrand; Moraes, Fernando

    2016-04-01

    Quasi-two-dimensional systems may exibit curvature, which adds three-dimensional influence to their internal properties. As shown by da Costa (1981 Phys. Rev. A 23 1982-7), charged particles moving on a curved surface experience a curvature-dependent potential which greatly influence their dynamics. In this paper, we study the electronic ballistic transport in deformed nanotubes. The one-electron Schrödinger equation with open boundary conditions is solved numerically with a flexible MAPLE code made available as supplementary data. We find that the curvature of the deformations indeed has strong effects on the electron dynamics, suggesting its use in the design of nanotube-based electronic devices.

  9. Geometrical analysis of deformation band lozenges and their scaling relationships to fault lenses

    NASA Astrophysics Data System (ADS)

    Awdal, Abdullah; Healy, David; Alsop, G. Ian

    2014-09-01

    Deformation bands can influence fluid flow in sandstone hydrocarbon reservoirs and therefore, understanding the geometrical attributes of individual bands and their patterns is a critical step in quantifying their connectivity. We present a geometrical study of deformation band lozenges, which are rock volumes contained between deformation bands, and fault lenses, which are rock volumes bounded by slip surfaces in fault cores. We investigate the statistical trends among data sets for deformation band lozenges and fault lenses in sandstones from the Moray Firth (Scotland) and southeastern Utah (USA), and explore their potential correlation to other attributes of the fracture pattern and petrophysical properties. The aspect ratio of lozenges, that represents the ratio of length or height to the maximum thickness of a lozenge, displays an oblate-shaped geometry in relation to fault-zone orientation. The length-thickness scaling relationships of lozenges are statistically similar to lenses. The scaling relationships show a slope break between lozenges bounded by deformation bands and lenses bounded by slip surfaces in the fault core. This break is inferred to mark the boundary between the lozenge domain and lens domain, and is likely due to a deformation transition from distributed strain for deformation bands to localised strain for slip surfaces. Furthermore, the integration of geometrical analysis with an understanding of scaling properties can help to make better predictions of fractures and fault properties in subsurface reservoirs.

  10. Connexions for the nuclear geometrical collective model

    NASA Astrophysics Data System (ADS)

    Rosensteel, G.; Sparks, N.

    2015-11-01

    The Bohr-Mottelson-Frankfurt model of nuclear rotations and quadrupole vibrations is a foundational model in nuclear structure physics. The model, also called the geometrical collective model or simply GCM(3), has two hidden mathematical structures, one group theoretic and the other differential geometric. Although the group structure has been understood for some time, the geometric structure is a new feature that this paper investigates in some detail. Using the de Rham Laplacian \\triangle =\\star d \\star d for the kinetic energy extends significantly the physical scope of the GCM(3) model. This Laplacian contains a ‘magnetic’ term due to the connexion between base manifold rotational and fibre vortex degrees of freedom. When the connexion specializes to irrotational flow, the Laplacian reduces to the Bohr-Mottelson kinetic energy operator.

  11. A novel scheme for automatic nonrigid image registration using deformation invariant feature and geometric constraint

    NASA Astrophysics Data System (ADS)

    Deng, Zhipeng; Lei, Lin; Zhou, Shilin

    2015-10-01

    Automatic image registration is a vital yet challenging task, particularly for non-rigid deformation images which are more complicated and common in remote sensing images, such as distorted UAV (unmanned aerial vehicle) images or scanning imaging images caused by flutter. Traditional non-rigid image registration methods are based on the correctly matched corresponding landmarks, which usually needs artificial markers. It is a rather challenging task to locate the accurate position of the points and get accurate homonymy point sets. In this paper, we proposed an automatic non-rigid image registration algorithm which mainly consists of three steps: To begin with, we introduce an automatic feature point extraction method based on non-linear scale space and uniform distribution strategy to extract the points which are uniform distributed along the edge of the image. Next, we propose a hybrid point matching algorithm using DaLI (Deformation and Light Invariant) descriptor and local affine invariant geometric constraint based on triangulation which is constructed by K-nearest neighbor algorithm. Based on the accurate homonymy point sets, the two images are registrated by the model of TPS (Thin Plate Spline). Our method is demonstrated by three deliberately designed experiments. The first two experiments are designed to evaluate the distribution of point set and the correctly matching rate on synthetic data and real data respectively. The last experiment is designed on the non-rigid deformation remote sensing images and the three experimental results demonstrate the accuracy, robustness, and efficiency of the proposed algorithm compared with other traditional methods.

  12. Geometric Models for Collaborative Search and Filtering

    ERIC Educational Resources Information Center

    Bitton, Ephrat

    2011-01-01

    This dissertation explores the use of geometric and graphical models for a variety of information search and filtering applications. These models serve to provide an intuitive understanding of the problem domains and as well as computational efficiencies to our solution approaches. We begin by considering a search and rescue scenario where both…

  13. Uncertainty estimation in reconstructed deformable models

    SciTech Connect

    Hanson, K.M.; Cunningham, G.S.; McKee, R.

    1996-12-31

    One of the hallmarks of the Bayesian approach to modeling is the posterior probability, which summarizes all uncertainties regarding the analysis. Using a Markov Chain Monte Carlo (MCMC) technique, it is possible to generate a sequence of objects that represent random samples drawn from the posterior distribution. We demonstrate this technique for reconstructions of two-dimensional objects from noisy projections taken from two directions. The reconstructed object is modeled in terms of a deformable geometrically-defined boundary with a constant interior density yielding a nonlinear reconstruction problem. We show how an MCMC sequence can be used to estimate uncertainties in the location of the edge of the reconstructed object.

  14. Effect of geometric parameters on deformation behavior of simple shear extrusion

    NASA Astrophysics Data System (ADS)

    Bagherpour, E.; Qods, F.; Ebrahimi, R.

    2014-08-01

    In the present study, the effect of geometric parameters on the simple shear extrusion (SSE) process as one of the most recent severe plastic deformation methods is investigated. Three deferent curvatures for deformation channel based on linear, quadratic and sine equations are introduced. Simulation of the process is carried out by means of the commercial finite element code ABAQUS/Explicit. Effect of die profile as well as backpressure on the strain, strain rate and load of deformation is studied. Results show that the shape of die profile does not have any significant effect on the required backpressure and the load of the process. The most homogeneous distribution of strain is obtained by linear die profile. Among all die profiles, only the linear profile can provide a constant strain rate. It is shown that linear profile is also the best candidate for deformation channel in SSE process due to its feasibility and homogeneity in the distribution of stain and constant strain rate.

  15. Geometric simplification of analysis models

    SciTech Connect

    Watterberg, P.A.

    1999-12-01

    Analysis programs have been having to deal with more and more complex objects as the capability to model fine detail increases. This can make them unacceptably slow. This project attempts to find heuristics for removing features from models in an automatic fashion in order to reduce polygon count. The approach is not one of theoretical completeness but rather one of trying to achieve useful results with scattered practical ideas. By removing a few simple things such as screw holes, slots, chambers, and fillets, large gains can be realized. Results varied but a reduction in the number of polygons by a factor of 10 is not unusual.

  16. Geometric phase analysis based on the windowed Fourier transform for the deformation field measurement

    NASA Astrophysics Data System (ADS)

    Dai, Xianglu; Xie, Huimin; Wang, Qinghua

    2014-06-01

    The geometric phase analysis (GPA), an important image-based deformation measurement method, has been used at both micro- and nano-scale. However, when a deformed image has apparent distortion, non-ignorable error in the obtained deformation field could occur by using this method. In this paper, the geometric phase analysis based on the windowed Fourier transform (WFT) is proposed to solve the above-mentioned issue, defined as the WFT-GPA method. In WFT-GPA, instead of the Fourier transform (FT), the WFT is utilized to extract the phase field block by block, and therefore more accurate local phase information can be acquired. The simulation tests, which include detailed discussion of influence factors for measurement accuracy such as window size and image noise, are conducted with digital deformed grids. The results verify that the WFT-GPA method not only keeps all advantages of traditional GPA method, but also owns a better accuracy for deformation measurement. Finally, the WFT-GPA method is applied to measure the machining distortion incurred in soft ultraviolet nanoimprint lithography (UV-NIL) process. The successful measurement shows the feasibility of this method and offers a full-field way for characterizing the replication quality of UV-NIL process.

  17. Yang-Mills generalization of the geometrical collective model

    NASA Astrophysics Data System (ADS)

    Rosensteel, George; Sparks, Nick

    2015-04-01

    The geometrical or Bohr-Mottelson model is generalized and recast as a Yang-Mills theory. The gauge symmetry determines conservation of Kelvin circulation. The circulation commutes with the Hamiltonian when it is the sum of the kinetic energy and a potential that depends only on deformation. The conventional Bohr-Mottelson model is the special case of circulation zero, and wave functions are complex-valued. In the generalization, any quantized value of the circulation is allowed, and the wave functions are vector-valued. The Yang-Mills formulation introduces a new coupling between the geometrical and intrinsic degrees of freedom. The coupling appears in the covariant derivative term of the collective kinetic energy. This kind of coupling is sometimes called ``magnetic'' because of the analogy with electrodynamics.

  18. Videogrammetric Model Deformation Measurement Technique

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Liu, Tian-Shu

    2001-01-01

    The theory, methods, and applications of the videogrammetric model deformation (VMD) measurement technique used at NASA for wind tunnel testing are presented. The VMD technique, based on non-topographic photogrammetry, can determine static and dynamic aeroelastic deformation and attitude of a wind-tunnel model. Hardware of the system includes a video-rate CCD camera, a computer with an image acquisition frame grabber board, illumination lights, and retroreflective or painted targets on a wind tunnel model. Custom software includes routines for image acquisition, target-tracking/identification, target centroid calculation, camera calibration, and deformation calculations. Applications of the VMD technique at five large NASA wind tunnels are discussed.

  19. Symmetries and deformations in the spherical shell model

    NASA Astrophysics Data System (ADS)

    Van Isacker, P.; Pittel, S.

    2016-02-01

    We discuss symmetries of the spherical shell model that make contact with the geometric collective model of Bohr and Mottelson. The most celebrated symmetry of this kind is SU(3), which is the basis of Elliott’s model of rotation. It corresponds to a deformed mean field induced by a quadrupole interaction in a single major oscillator shell N and can be generalized to include several major shells. As such, Elliott’s SU(3) model establishes the link between the spherical shell model and the (quadrupole component of the) geometric collective model. We introduce the analogue symmetry induced by an octupole interaction in two major oscillator shells N-1 and N, leading to an octupole-deformed solution of the spherical shell model. We show that in the limit of large oscillator shells, N\\to ∞ , the algebraic octupole interaction tends to that of the geometric collective model.

  20. Strong deflection limit lensing effects in the minimal geometric deformation and Casadio–Fabbri–Mazzacurati solutions

    NASA Astrophysics Data System (ADS)

    Cavalcanti, R. T.; Goncalves da Silva, A.; da Rocha, Roldão

    2016-11-01

    In this paper we apply the strong deflection limit approach to investigate the gravitational lensing phenomena beyond general relativity. This is accomplished by considering the lensing effects related to black hole solutions that emerge out of the domain of Einstein gravity, namely, the ones acquired from the method of geometric deformation and the Casadio–Fabbri–Mazzacurati (CFM) brane-world black holes. The lensing observables, for those brane-world black hole metrics, are compared with the standard ones for the Schwarzschild case. We prove that brane-world black holes could have significantly different observational signatures, compared to the Schwarzschild black hole, with terms containing the post-Newtonian parameter, for the case of the CFM, and terms with variable brane-world tension, for the method of geometric deformation.

  1. Brane-world stars from minimal geometric deformation, and black holes

    NASA Astrophysics Data System (ADS)

    Casadio, Roberto; Ovalle, Jorge

    2014-02-01

    Using the effective four-dimensional Einstein field equations, we build analytical models of spherically symmetric stars in the brane-world, in which the external space-time contains both an ADM mass and a tidal charge. In order to determine the interior geometry, we apply the principle of minimal geometric deformation, which allows one to map general relativistic solutions to solutions of the effective four-dimensional brane-world equations. We further restrict our analysis to stars with a radius linearly related to the total general relativistic mass, and obtain a general relation between the latter, the brane-world ADM mass and the tidal charge. In these models, the value of the star's radius can then be taken to zero smoothly, thus obtaining brane-world black hole metrics with a tidal charge solely determined by the mass of the source and the brane tension. We find configurations which entail a partial screening of the gravitational mass, and general conclusions regarding the minimum mass for semiclassical black holes are also drawn.

  2. Model-based vision using geometric hashing

    NASA Astrophysics Data System (ADS)

    Akerman, Alexander, III; Patton, Ronald

    1991-04-01

    The Geometric Hashing technique developed by the NYU Courant Institute has been applied to various automatic target recognition applications. In particular, I-MATH has extended the hashing algorithm to perform automatic target recognition ofsynthetic aperture radar (SAR) imagery. For this application, the hashing is performed upon the geometric locations of dominant scatterers. In addition to being a robust model-based matching algorithm -- invariant under translation, scale, and 3D rotations of the target -- hashing is of particular utility because it can still perform effective matching when the target is partially obscured. Moreover, hashing is very amenable to a SIMD parallel processing architecture, and thus potentially realtime implementable.

  3. Picard-Fuchs uniformization and geometric isomonodromic deformations: Modularity and variation of the mirror map

    NASA Astrophysics Data System (ADS)

    Doran, Charles Francis, Jr.

    1999-12-01

    In the first half of this thesis we determine geometric criteria for when the Picard-Fuchs equations of certain families of elliptic curves and K3 surfaces orbifold uniformize their base spaces. This problem is motivated by the Mirror-Moonshine Conjecture of Lian and Yau, which asserts that for a particular class of K3 surface families the local inverse to the period mapping (the ``mirror map'') is a McKay-Thompson series. We completely answer the related question, ``When is the mirror map a modular function?'', for families of elliptic curves with a section and certain lattice polarized families of K3 surfaces, in terms of the functional and generalized functional invariants. In the second half of the thesis we define, via the Gauss-Manin connection, a new class of algebraic solutions to isomonodromic deformation equations. Given a suitable family of varieties fibered over P1, with positions of the singular fibers varying, the associated family of Picard-Fuchs equations is monodromy preserving. Any family of monodromy preserving differential equations defines a solution to an auxiliary completely integrable Hamiltonian system-the isomonodromic deformation equation. We call the solutions coming from deformations of Picard-Fuchs equations, through Picard-Fuchs equations, ``geometric isomonodromic deformations''. These describe the variation of the mirror map in families.

  4. Geometric modeling for computer aided design

    NASA Technical Reports Server (NTRS)

    Schwing, James L.

    1993-01-01

    Over the past several years, it has been the primary goal of this grant to design and implement software to be used in the conceptual design of aerospace vehicles. The work carried out under this grant was performed jointly with members of the Vehicle Analysis Branch (VAB) of NASA LaRC, Computer Sciences Corp., and Vigyan Corp. This has resulted in the development of several packages and design studies. Primary among these are the interactive geometric modeling tool, the Solid Modeling Aerospace Research Tool (smart), and the integration and execution tools provided by the Environment for Application Software Integration and Execution (EASIE). In addition, it is the purpose of the personnel of this grant to provide consultation in the areas of structural design, algorithm development, and software development and implementation, particularly in the areas of computer aided design, geometric surface representation, and parallel algorithms.

  5. a Modular Geometric Model for Underwater Photogrammetry

    NASA Astrophysics Data System (ADS)

    Maas, H.-G.

    2015-04-01

    Underwater applications of photogrammetric measurement techniques usually need to deal with multimedia photogrammetry aspects, which are characterized by the necessity of handling optical rays that are broken at interfaces between optical media with different refrative indices according to Snell's Law. This so-called multimedia geometry has to be incorporated into geometric models in order to achieve correct measurement results. The paper shows a flexible yet strict geometric model for the handling of refraction effects on the optical path, which can be implemented as a module into photogrammetric standard tools such as spatial resection, spatial intersection, bundle adjustment or epipolar line computation. The module is especially well suited for applications, where an object in water is observed by cameras in air through one or more plane parallel glass interfaces, as it allows for some simplifications here.

  6. Geometrical branching model: Correlations and jets

    NASA Astrophysics Data System (ADS)

    Hwa, Rudolph C.

    1988-04-01

    A geometrical model for multiparticle production at low as well as high pT is discussed. Below the threshold of substantial production of jets, the model has geometrical scaling and Koba-Nielsen-Olesen scaling, the latter being a result of Furry branching in multiplicity distribution at each impact parameter. Above the threshold the production of jets is explicitly taken into account by use of perturbative QCD. The separation into soft and hard components is done in the eikonal formalism consistent with unitarity. Geometrical scaling defines the soft component of the eikonal function. The hard component is related to the jet-production cross section; the pT cutoff is not chosen arbitrarily, but is to be determined by σel and σtot. Forward-backward multiplicity correlation can be calculated separately for the cases of no jets and with jets. The emphasis in this paper is on the formalism of the model. The procedure to determine the multiplicity distribution at all s is discussed.

  7. Non-geometric fluxes, quasi-Hopf twist deformations, and nonassociative quantum mechanics

    SciTech Connect

    Mylonas, Dionysios Szabo, Richard J.; Schupp, Peter

    2014-12-15

    We analyse the symmetries underlying nonassociative deformations of geometry in non-geometric R-flux compactifications which arise via T-duality from closed strings with constant geometric fluxes. Starting from the non-abelian Lie algebra of translations and Bopp shifts in phase space, together with a suitable cochain twist, we construct the quasi-Hopf algebra of symmetries that deforms the algebra of functions and the exterior differential calculus in the phase space description of nonassociative R-space. In this setting, nonassociativity is characterised by the associator 3-cocycle which controls non-coassociativity of the quasi-Hopf algebra. We use abelian 2-cocycle twists to construct maps between the dynamical nonassociative star product and a family of associative star products parametrized by constant momentum surfaces in phase space. We define a suitable integration on these nonassociative spaces and find that the usual cyclicity of associative noncommutative deformations is replaced by weaker notions of 2-cyclicity and 3-cyclicity. Using this star product quantization on phase space together with 3-cyclicity, we formulate a consistent version of nonassociative quantum mechanics, in which we calculate the expectation values of area and volume operators, and find coarse-graining of the string background due to the R-flux.

  8. Non-geometric fluxes, quasi-Hopf twist deformations, and nonassociative quantum mechanics

    NASA Astrophysics Data System (ADS)

    Mylonas, Dionysios; Schupp, Peter; Szabo, Richard J.

    2014-12-01

    We analyse the symmetries underlying nonassociative deformations of geometry in non-geometric R-flux compactifications which arise via T-duality from closed strings with constant geometric fluxes. Starting from the non-abelian Lie algebra of translations and Bopp shifts in phase space, together with a suitable cochain twist, we construct the quasi-Hopf algebra of symmetries that deforms the algebra of functions and the exterior differential calculus in the phase space description of nonassociative R-space. In this setting, nonassociativity is characterised by the associator 3-cocycle which controls non-coassociativity of the quasi-Hopf algebra. We use abelian 2-cocycle twists to construct maps between the dynamical nonassociative star product and a family of associative star products parametrized by constant momentum surfaces in phase space. We define a suitable integration on these nonassociative spaces and find that the usual cyclicity of associative noncommutative deformations is replaced by weaker notions of 2-cyclicity and 3-cyclicity. Using this star product quantization on phase space together with 3-cyclicity, we formulate a consistent version of nonassociative quantum mechanics, in which we calculate the expectation values of area and volume operators, and find coarse-graining of the string background due to the R-flux.

  9. Geometric aeolian dune crest migration model

    NASA Astrophysics Data System (ADS)

    Swanson, T.; Mohrig, D. C.; Kocurek, G.; Pedersen, A.

    2012-12-01

    We present a geometric aeolian dune crest model that provides a predictive linkage between local lee face sediment deposition and wholesale landform change. The model is driven using an initial condition of 3D dune crest data obtained from a time series of airborne LIDAR surveys of White Sands, NM, and wind observations from nearby Holloman AFB. Transient dune migration is modeled by volume filling of a simple theoretical dune geometry with sediment flux derived using shear velocity dependent transport (Bagnold, 1941) modified by a new incidence angle dependent lee face sediment deposition function styled after Rubin and Hunter (1985). Model calibration is achieved using an azimuthal wind direction correction and threshold values for shear velocity dependent sediment transport. Agreement between observations and model results are presented using a l2 norm representing a global error estimate.

  10. Effect of the geometric deformations on the Brillouin scattering in the standard single-mode optical fiber

    NASA Astrophysics Data System (ADS)

    Fajkus, Marcel; Nedoma, Jan; Kepak, Stanislav; Jaros, Jakub; Cubik, Jakub; Zboril, Ondrej; Novak, Martin; Vasinek, Vladimir

    2016-04-01

    Distributed optical fiber sensors monitor the measured variables over the entire fiber length. Distributed strain and temperature system (DSTS) scans the frequency change of Brillouin scattering which depends on the measured temperature and mechanical stress of the fiber. This paper deals with the effect of fiber geometric deformations on the Brillouin scattering. The points of maximum and minimum deformations were searched using the Brillouin frequency change. The optical fiber was installed into base geometric shapes and deformed by mechanical stress. Standard single-mode fiber G.652.D was used. The aim of this study was to verify if the standard optical fiber originally designed for telecommunication transmissions are suitable for sensor applications with DSTS. It turned out that these fibers are applicable for the deformation measurement and geometrical arrangement has great influence on the measurement sensitivity too.

  11. Geometrical basis for the Standard Model

    SciTech Connect

    Potter, F. )

    1994-02-01

    The robust character of the Standard Model is confirmed. Examination of its geometrical basis in three equivalent internal symmetry spaces - the unitary plane C[sup 2], the quaternion space Q, and the real space R[sup 4] - as well as the real space R[sup 3] uncovers mathematical properties that predict the physical properties of leptons and quarks. The finite rotational subgroups of the gauge group SU(2)[sub L] [times] U(1)[sub Y] generate exactly three lepton families and four quark families and reveal how quarks and leptons are related. Among the physical properties explained are the mass ratios of the six leptons and eight quarks, the origin of the left-handed preference by the weak interaction, the geometrical source of color symmetry, and the zero neutrino masses. The (u,d) and (c,s) quark families team together to satisfy the triangle anomaly cancellation with the electron family, while the other families pair one-to-one for cancellation. The spontaneously broken symmetry is discrete and needs no Higgs mechanism. Predictions include all massless neutrinos, the top quark at 160 GeV/c[sup 2], the b[prime] quark at 80 GeV/c[sup 2], and the t[prime] quark at 2600 GeV/c[sup 2].

  12. Geometrical model of the Baltic artesian basin

    NASA Astrophysics Data System (ADS)

    Sennikovs, J.; Virbulis, J.; Bethers, U.

    2012-04-01

    Baltic artesian basin (BAB) is a multi-layer sedimentary basin spanning around 480'000 km2. BAB is located in the territory of Latvia, Lithuania and Estonia, parts of Poland, Russia, Belarus and large area of the Baltic Sea, including island of Gotland. The thickness of sedimentary cover is about 5000 m in the south-western part. Crystalline bedding reaches the surface in the northern and north-western parts. The aim of the present work is development of the model of geometric structure and three dimensional finite element mesh for the hydrogeological model of the whole BAB. The information that is used to build the geometrical structure includes: (1) Stratigraphic information from boreholes in Latvia and Estonia (2) Maps of height isolines of geological layers for Latvia and Lithuania (3) Maps of sub-quaternary deposits in Latvia and Lithuania (4) Maps of fault lines on the crystalline basement surface in Latvia, Lithuania and Estonia (5) Buried valley data from Latvia and Estonia (6) Earth topography data (7) Baltic sea depth data (8) Data from published geological cross-sections, information from books and other sources. Unification of the heterogeneous information from different sources, which are employed for building of the geometrical structure of the model are performed. Special algorithms are developed for this purpose considering the priority, importance and plausibility of each of the data sources. Pre-processing of the borehole information to screen out the outlying borehole data has been performed. Model of geological structure contains 42 layers. It includes aquifers and aquitards from Cambrian up to the Quaternary deposits. Fault displacements are incorporated into the model taking into account data from the published structural maps. Four reconstructed regional erosion surfaces (upper Ordovician, Devonian, Permian and Quaternary) are included into the model Three dimensional mesh of the geological structure is constructed layer-wise. The triangular

  13. Nuclear deformability and telomere dynamics are regulated by cell geometric constraints

    PubMed Central

    Makhija, Ekta; Jokhun, D. S.; Shivashankar, G. V.

    2016-01-01

    Forces generated by the cytoskeleton can be transmitted to the nucleus and chromatin via physical links on the nuclear envelope and the lamin meshwork. Although the role of these active forces in modulating prestressed nuclear morphology has been well studied, the effect on nuclear and chromatin dynamics remains to be explored. To understand the regulation of nuclear deformability by these active forces, we created different cytoskeletal states in mouse fibroblasts using micropatterned substrates. We observed that constrained and isotropic cells, which lack long actin stress fibers, have more deformable nuclei than elongated and polarized cells. This nuclear deformability altered in response to actin, myosin, formin perturbations, or a transcriptional down-regulation of lamin A/C levels in the constrained and isotropic geometry. Furthermore, to probe the effect of active cytoskeletal forces on chromatin dynamics, we tracked the spatiotemporal dynamics of heterochromatin foci and telomeres. We observed increased dynamics and decreased correlation of the heterochromatin foci and telomere trajectories in constrained and isotropic cell geometry. The observed enhanced dynamics upon treatment with actin depolymerizing reagents in elongated and polarized geometry were regained once the reagent was washed off, suggesting an inherent structural memory in chromatin organization. We conclude that active forces from the cytoskeleton and rigidity from lamin A/C nucleoskeleton can together regulate nuclear and chromatin dynamics. Because chromatin remodeling is a necessary step in transcription control and its memory, genome integrity, and cellular deformability during migration, our results highlight the importance of cell geometric constraints as critical regulators in cell behavior. PMID:26699462

  14. Geometric investigations of a vorticity model equation

    NASA Astrophysics Data System (ADS)

    Bauer, Martin; Kolev, Boris; Preston, Stephen C.

    2016-01-01

    This article consists of a detailed geometric study of the one-dimensional vorticity model equation which is a particular case of the generalized Constantin-Lax-Majda equation. Wunsch showed that this equation is the Euler-Arnold equation on Diff (S1) when the latter is endowed with the right-invariant homogeneous H ˙ 1 / 2-metric. In this article we prove that the exponential map of this Riemannian metric is not Fredholm and that the sectional curvature is locally unbounded. Furthermore, we prove a Beale-Kato-Majda-type blow-up criterion, which we then use to demonstrate a link to our non-Fredholmness result. Finally, we extend a blow-up result of Castro-Córdoba to the periodic case and to a much wider class of initial conditions, using a new generalization of an inequality for Hilbert transforms due to Córdoba-Córdoba.

  15. Transformation of a Foucault shadowgram into the geometrical model of a shear interferogram by means of isophotometry

    NASA Astrophysics Data System (ADS)

    Zhevlakov, A. P.; Zatsepina, M. E.; Kirillovskii, V. K.

    2014-06-01

    The principles of transformation of a Foucault shadowgram into a quantitative map of wave-front deformation based on creation of a system of isophotes are unveiled. The presented studies and their results prove that there is a high degree of correspondence between a Foucault shadowgram and the geometrical model of a shear interferogram with respect to displaying wave-front deformations.

  16. Geometrically engineering the standard model: Locally unfolding three families out of E{sub 8}

    SciTech Connect

    Bourjaily, Jacob L.

    2007-08-15

    This paper extends and builds upon the results of [J. L. Bourjaily, arXiv:0704.0444.], in which we described how to use the tools of geometrical engineering to deform geometrically engineered grand unified models into ones with lower symmetry. This top-down unfolding has the advantage that the relative positions of singularities giving rise to the many 'low-energy' matter fields are related by only a few parameters which deform the geometry of the unified model. And because the relative positions of singularities are necessary to compute the superpotential, for example, this is a framework in which the arbitrariness of geometrically engineered models can be greatly reduced. In [J. L. Bourjaily, arXiv:0704.0444.], this picture was made concrete for the case of deforming the representations of an SU{sub 5} model into their standard model content. In this paper we continue that discussion to show how a geometrically engineered 16 of SO{sub 10} can be unfolded into the standard model, and how the three families of the standard model uniquely emerge from the unfolding of a single, isolated E{sub 8} singularity.

  17. Geometric Modeling of Inclusions as Ellipsoids

    NASA Technical Reports Server (NTRS)

    Bonacuse, Peter J.

    2008-01-01

    Nonmetallic inclusions in gas turbine disk alloys can have a significant detrimental impact on fatigue life. Because large inclusions that lead to anomalously low lives occur infrequently, probabilistic approaches can be utilized to avoid the excessively conservative assumption of lifing to a large inclusion in a high stress location. A prerequisite to modeling the impact of inclusions on the fatigue life distribution is a characterization of the inclusion occurrence rate and size distribution. To help facilitate this process, a geometric simulation of the inclusions was devised. To make the simulation problem tractable, the irregularly sized and shaped inclusions were modeled as arbitrarily oriented, three independent dimensioned, ellipsoids. Random orientation of the ellipsoid is accomplished through a series of three orthogonal rotations of axes. In this report, a set of mathematical models for the following parameters are described: the intercepted area of a randomly sectioned ellipsoid, the dimensions and orientation of the intercepted ellipse, the area of a randomly oriented sectioned ellipse, the depth and width of a randomly oriented sectioned ellipse, and the projected area of a randomly oriented ellipsoid. These parameters are necessary to determine an inclusion s potential to develop a propagating fatigue crack. Without these mathematical models, computationally expensive search algorithms would be required to compute these parameters.

  18. Deformable human body model development

    SciTech Connect

    Wray, W.O.; Aida, T.

    1998-11-01

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). A Deformable Human Body Model (DHBM) capable of simulating a wide variety of deformation interactions between man and his environment has been developed. The model was intended to have applications in automobile safety analysis, soldier survivability studies and assistive technology development for the disabled. To date, we have demonstrated the utility of the DHBM in automobile safety analysis and are currently engaged in discussions with the U.S. military involving two additional applications. More specifically, the DHBM has been incorporated into a Virtual Safety Lab (VSL) for automobile design under contract to General Motors Corporation. Furthermore, we have won $1.8M in funding from the U.S. Army Medical Research and Material Command for development of a noninvasive intracranial pressure measurement system. The proposed research makes use of the detailed head model that is a component of the DHBM; the project duration is three years. In addition, we have been contacted by the Air Force Armstrong Aerospace Medical Research Laboratory concerning possible use of the DHBM in analyzing the loads and injury potential to pilots upon ejection from military aircraft. Current discussions with Armstrong involve possible LANL participation in a comparison between DHBM and the Air Force Articulated Total Body (ATB) model that is the current military standard.

  19. A geometric model of defensive peripersonal space.

    PubMed

    Bufacchi, R J; Liang, M; Griffin, L D; Iannetti, G D

    2016-01-01

    Potentially harmful stimuli occurring within the defensive peripersonal space (DPPS), a protective area surrounding the body, elicit stronger defensive reactions. The spatial features of the DPPS are poorly defined and limited to descriptive estimates of its extent along a single dimension. Here we postulated a family of geometric models of the DPPS, to address two important questions with respect to its spatial features: What is its fine-grained topography? How does the nervous system represent the body area to be defended? As a measure of the DPPS, we used the strength of the defensive blink reflex elicited by electrical stimulation of the hand (hand-blink reflex, HBR), which is reliably modulated by the position of the stimulated hand in egocentric coordinates. We tested the goodness of fit of the postulated models to HBR data from six experiments in which we systematically explored the HBR modulation by hand position in both head-centered and body-centered coordinates. The best-fitting model indicated that 1) the nervous system's representation of the body area defended by the HBR can be approximated by a half-ellipsoid centered on the face and 2) the DPPS extending from this area has the shape of a bubble elongated along the vertical axis. Finally, the empirical observation that the HBR is modulated by hand position in head-centered coordinates indicates that the DPPS is anchored to the face. The modeling approach described in this article can be generalized to describe the spatial modulation of any defensive response. PMID:26510762

  20. Geometric modeling for computer aided design

    NASA Technical Reports Server (NTRS)

    Schwing, James L.; Olariu, Stephen

    1995-01-01

    The primary goal of this grant has been the design and implementation of software to be used in the conceptual design of aerospace vehicles particularly focused on the elements of geometric design, graphical user interfaces, and the interaction of the multitude of software typically used in this engineering environment. This has resulted in the development of several analysis packages and design studies. These include two major software systems currently used in the conceptual level design of aerospace vehicles. These tools are SMART, the Solid Modeling Aerospace Research Tool, and EASIE, the Environment for Software Integration and Execution. Additional software tools were designed and implemented to address the needs of the engineer working in the conceptual design environment. SMART provides conceptual designers with a rapid prototyping capability and several engineering analysis capabilities. In addition, SMART has a carefully engineered user interface that makes it easy to learn and use. Finally, a number of specialty characteristics have been built into SMART which allow it to be used efficiently as a front end geometry processor for other analysis packages. EASIE provides a set of interactive utilities that simplify the task of building and executing computer aided design systems consisting of diverse, stand-alone, analysis codes. Resulting in a streamlining of the exchange of data between programs reducing errors and improving the efficiency. EASIE provides both a methodology and a collection of software tools to ease the task of coordinating engineering design and analysis codes.

  1. On the geometric relationship between deformation microstructures in zircon and the kinematic framework of the shear zone

    NASA Astrophysics Data System (ADS)

    Kovaleva, Elizaveta; Klötzli, Urs; Habler, Gerlinde

    2016-10-01

    We present novel microstructural analyses of zircon from a variety of strained rocks. For the first time, multiple plastically deformed zircon crystals were analyzed in a kinematic context of the respective host shear zones. Our aim was to derive how the orientation of zircon grains in a shear zone affects their deformation, based on careful in situ observations. For sampling, we selected zircon-bearing rocks that were deformed by simple shear. Samples covered a range of P-T conditions and lithologies, including various meta-igneous and meta-sedimentary gneisses. Microstructural analyses of zircon crystals in situ with scanning electron backscatter diffraction mapping show strong geometrical relationships between orientations of: (i) the long axes of plastically deformed zircon crystals, (ii) the crystallographic orientation of misorientation axes in plastically deformed zircon crystals and (iii) the foliation and lineation directions of the respective samples. We assume that zircon crystals did not experience post-deformation rigid body rotation, and thus the true geometric link can be observed. The relationships are the following: (a) plastically deformed zircon crystals usually have long axes parallel to the mylonitic foliation plane; (b) crystals with < c > axes oriented at an angle > 15° to the foliation plane are undeformed or fractured. Zircon crystals that have < c > axes aligned parallel or normal to the stretching lineation within the foliation plane develop misorientation and rotation axes parallel to the [001] crystallographic direction. Zircon grains with the < c > axis aligned at 30-60° to the lineation within the foliation plane often develop either two low Miller indices misorientation axes or one high Miller indices misorientation axis. Host phases have a significant influence on deformation mechanisms. In a relatively soft matrix, zircon is more likely to develop low Miller indices misorientation axes than in a relatively strong matrix. These

  2. Deformable image registration for geometrical evaluation of DIBH radiotherapy treatment of lung cancer patients

    NASA Astrophysics Data System (ADS)

    Ottosson, W.; Lykkegaard Andersen, J. A.; Borrisova, S.; Mellemgaard, A.; Behrens, C. F.

    2014-03-01

    Respiration and anatomical variation during radiotherapy (RT) of lung cancer yield dosimetric uncertainties of the delivered dose, possibly affecting the clinical outcome if not corrected for. Adaptive radiotherapy (ART), based on deformable image registration (DIR) and Deep-Inspiration-Breath-Hold (DIBH) gating can potentially improve the accuracy of RT. Purpose: The objective was to investigate the performance of contour propagation on repeated CT and Cone Beam CT (CBCT) images in DIBH compared to images acquired in free breathing (FB), using a recently released DIR software. Method: Three locally advanced non-small cell lung cancer patients were included, each with a planning-, midterm- and final CT (pCT, mCT, fCT) and 7 CBCTs acquired weekly and on the same day as the mCT and fCT. All imaging were performed in both FB and DIBH, using Varian RPM system for respiratory tracking. Delineations of anatomical structures were performed on each image set. The CT images were retrospective rigidly and deformable registered to all obtained images using the Varian Smart Adapt v. 11.0. The registered images were analysed for volume change and Dice Similarity Coefficient (DSC). Result: Geometrical similarities were found between propagated and manually delineated structures, with a slightly favour of FB imaging. Special notice should be taken to registrations where image artefacts or low tissue contrast are present. Conclusion: This study does not support the hypothesis that DIBH images perform better image registration than FB images. However DIR is a feasible tool for ART of lung cancer.

  3. Geometric deviation modeling by kinematic matrix based on Lagrangian coordinate

    NASA Astrophysics Data System (ADS)

    Liu, Weidong; Hu, Yueming; Liu, Yu; Dai, Wanyi

    2015-09-01

    Typical representation of dimension and geometric accuracy is limited to the self-representation of dimension and geometric deviation based on geometry variation thinking, yet the interactivity affection of geometric variation and gesture variation of multi-rigid body is not included. In this paper, a kinematic matrix model based on Lagrangian coordinate is introduced, with the purpose of unified model for geometric variation and gesture variation and their interactive and integrated analysis. Kinematic model with joint, local base and movable base is built. The ideal feature of functional geometry is treated as the base body; the fitting feature of functional geometry is treated as the adjacent movable body; the local base of the kinematic model is fixed onto the ideal geometry, and the movable base of the kinematic model is fixed onto the fitting geometry. Furthermore, the geometric deviation is treated as relative location or rotation variation between the movable base and the local base, and it's expressed by the Lagrangian coordinate. Moreover, kinematic matrix based on Lagrangian coordinate for different types of geometry tolerance zones is constructed, and total freedom for each kinematic model is discussed. Finally, the Lagrangian coordinate library, kinematic matrix library for geometric deviation modeling is illustrated, and an example of block and piston fits is introduced. Dimension and geometric tolerances of the shaft and hole fitting feature are constructed by kinematic matrix and Lagrangian coordinate, and the results indicate that the proposed kinematic matrix is capable and robust in dimension and geometric tolerances modeling.

  4. Uncertainties in tomographic reconstructions based on deformable models

    NASA Astrophysics Data System (ADS)

    Hanson, Kenneth M.; Cunningham, Gregory S.; McKee, Robert J.

    1997-04-01

    Deformable geometric models fit very naturally into the context of Bayesian analysis. The prior probability of boundary shapes is taken to proportional to the negative exponential of the deformation energy used to control the boundary. This probabilistic interpretation is demonstrated using a Markov-Chain Monte-Carlo (MCMC) technique, which permits one to generate configurations that populate the prior. One of may uses for deformable models is to solve ill-posed tomographic reconstruction problems, which we demonstrate by reconstructing a two-dimensional object from two orthogonal noisy projections. We show how MCMC samples drawn from the posterior can be used to estimate uncertainties in the location of the edge of the reconstructed object.

  5. Geometrizing the Quantum - A Toy Model

    SciTech Connect

    Koch, Benjamin

    2009-12-15

    It is shown that the equations of relativistic Bohmian mechanics for multiple bosonic particles have a dual description in terms of a classical theory of conformally 'curved' space-time. This shows that it is possible to formulate quantum mechanics as a purely classical geometrical theory. The results are further generalized to interactions with an external electromagnetic field.

  6. The Minimized Power Geometric model: An analytical mixing model for calculating polyphase rock viscosities consistent with experimental data

    NASA Astrophysics Data System (ADS)

    Huet, B.; Yamato, P.; Grasemann, B.

    2014-04-01

    Here we introduce the Minimized Power Geometric (MPG) model which predicts the viscosity of any polyphase rocks deformed during ductile flow. The volumetric fractions and power law parameters of the constituting phases are the only model inputs required. The model is based on a minimization of the mechanical power dissipated in the rock during deformation. In contrast to existing mixing models based on minimization, we use the Lagrange multipliers method and constraints of strain rate and stress geometric averaging. This allows us to determine analytical expressions for the polyphase rock viscosity, its power law parameters, and the partitioning of strain rate and stress between the phases. The power law bulk behavior is a consequence of our model and not an assumption. Comparison of model results with 15 published experimental data sets on two-phase aggregates shows that the MPG model reproduces accurately both experimental viscosities and creep parameters, even where large viscosity contrasts are present. In detail, the ratio between experimental and MPG-predicted viscosities averages 1.6. Deviations from the experimental values are likely to be due to microstructural processes (strain localization and coeval other deformation mechanisms) that are neglected by the model. Existing models that are not based on geometric averaging show a poorer fit with the experimental data. As long as the limitations of the mixing models are kept in mind, the MPG model offers great potential for applications in structural geology and numerical modeling.

  7. Geometric aspects of shear jamming induced by deformation of frictionless sphere packings

    NASA Astrophysics Data System (ADS)

    Vinutha, H. A.; Sastry, Srikanth

    2016-09-01

    It has recently been demonstrated that shear deformation of frictionless sphere packings leads to structures that will undergo jamming in the presence of friction, at densities well below the isotropic jamming point {φj}≈ 0.64 , and at high enough strains. Here, we show that the geometric features induced by strain are robust with respect to finite size effects, and include the feature of hyperuniformity, previously studied in the context of jamming, and more recently in driven systems. We study the approach to jamming as strain is increased, by evolving frictionless sheared configurations through frictional dynamics, and thereby identify a critical, or jamming, strain for each density, for a chosen value of the coefficient of friction. In the presence of friction above a certain strain value the sheared frictionless packings begin to develop finite stresses, which marks the onset of shear jamming. At a higher strain value, the shear stress reaches a saturation value after rising rapidly above the onset of shear jamming, which permits identification of the shear jamming transition. The onset of shear jamming and shear jamming are found to occur when the coordination number Z reaches values of Z  =  3 and Z  =  4 respectively. By considering percolation probabilities for the contact network, clusters of four coordinated and six coordinated spheres, we show that the percolation of four coordinated spheres corresponds to the onset of shear jamming behaviour, whereas the percolation of six coordinated spheres corresponds to shear jamming, for the chosen friction coefficients. At the onset of shear jamming, the force distribution begins to develop a peak at finite value and the force network is anisotropic and heterogeneous. And at the shear jamming transition, the force distribution has a well defined peak close to < f> and the force network is less anisotropic and homogeneous. We briefly discuss mechanical aspects of the jamming behaviour by

  8. Modal Substructuring of Geometrically Nonlinear Finite-Element Models

    DOE PAGESBeta

    Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

    2016-02-01

    The efficiency of a modal substructuring method depends on the component modes used to reduce each subcomponent model. Methods such as Craig–Bampton have been used extensively to reduce linear finite-element models with thousands or even millions of degrees of freedom down orders of magnitude while maintaining acceptable accuracy. A novel reduction method is proposed here for geometrically nonlinear finite-element models using the fixed-interface and constraint modes of the linearized system to reduce each subcomponent model. The geometric nonlinearity requires an additional cubic and quadratic polynomial function in the modal equations, and the nonlinear stiffness coefficients are determined by applying amore » series of static loads and using the finite-element code to compute the response. The geometrically nonlinear, reduced modal equations for each subcomponent are then coupled by satisfying compatibility and force equilibrium. This modal substructuring approach is an extension of the Craig–Bampton method and is readily applied to geometrically nonlinear models built directly within commercial finite-element packages. The efficiency of this new approach is demonstrated on two example problems: one that couples two geometrically nonlinear beams at a shared rotational degree of freedom, and another that couples an axial spring element to the axial degree of freedom of a geometrically nonlinear beam. The nonlinear normal modes of the assembled models are compared with those of a truth model to assess the accuracy of the novel modal substructuring approach.« less

  9. Integration of geometric modeling and advanced finite element preprocessing

    NASA Technical Reports Server (NTRS)

    Shephard, Mark S.; Finnigan, Peter M.

    1987-01-01

    The structure to a geometry based finite element preprocessing system is presented. The key features of the system are the use of geometric operators to support all geometric calculations required for analysis model generation, and the use of a hierarchic boundary based data structure for the major data sets within the system. The approach presented can support the finite element modeling procedures used today as well as the fully automated procedures under development.

  10. Modeling of spray droplets deformation and breakup

    NASA Technical Reports Server (NTRS)

    Ibrahim, E. A.; Yang, H. Q.; Przekwas, A. J.

    1993-01-01

    A droplet deformation and breakup (DDB) model is proposed to study shear-type mechanism of spray droplets in pure extentional flows. A numerical solution of the DDB model equation is obtained using a fourth-order Runge-Kutta initial-value solver. The predictions of the DDB model as well as semianalytical and the Taylor analogy models are compared with the experimental data (Krzeczkowski, 1980) for shear breakup, which depict the dimensionless deformation of the drop vs dimensionless time.

  11. Sigma models for genuinely non-geometric backgrounds

    NASA Astrophysics Data System (ADS)

    Chatzistavrakidis, Athanasios; Jonke, Larisa; Lechtenfeld, Olaf

    2015-11-01

    The existence of genuinely non-geometric backgrounds, i.e. ones without geometric dual, is an important question in string theory. In this paper we examine this question from a sigma model perspective. First we construct a particular class of Courant algebroids as protobialgebroids with all types of geometric and non-geometric fluxes. For such structures we apply the mathematical result that any Courant algebroid gives rise to a 3D topological sigma model of the AKSZ type and we discuss the corresponding 2D field theories. It is found that these models are always geometric, even when both 2-form and 2-vector fields are neither vanishing nor inverse of one another. Taking a further step, we suggest an extended class of 3D sigma models, whose world volume is embedded in phase space, which allow for genuinely non-geometric backgrounds. Adopting the doubled formalism such models can be related to double field theory, albeit from a world sheet perspective.

  12. Analytical volcano deformation source models

    USGS Publications Warehouse

    Lisowski, Michael; Dzurisin, Daniel

    2007-01-01

    Primary volcanic landforms are created by the ascent and eruption of magma. The ascending magma displaces and interacts with surrounding rock and fluids as it creates new pathways, flows through cracks or conduits, vesiculates, and accumulates in underground reservoirs. The formation of new pathways and pressure changes within existing conduits and reservoirs stress and deform the surrounding rock. Eruption products load the crust. The pattern and rate of surface deformation around volcanoes reflect the tectonic and volcanic processes transmitted to the surface through the mechanical properties of the crust.

  13. Multiscale geometric modeling of macromolecules II: Lagrangian representation

    PubMed Central

    Feng, Xin; Xia, Kelin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei

    2013-01-01

    Geometric modeling of biomolecules plays an essential role in the conceptualization of biolmolecular structure, function, dynamics and transport. Qualitatively, geometric modeling offers a basis for molecular visualization, which is crucial for the understanding of molecular structure and interactions. Quantitatively, geometric modeling bridges the gap between molecular information, such as that from X-ray, NMR and cryo-EM, and theoretical/mathematical models, such as molecular dynamics, the Poisson-Boltzmann equation and the Nernst-Planck equation. In this work, we present a family of variational multiscale geometric models for macromolecular systems. Our models are able to combine multiresolution geometric modeling with multiscale electrostatic modeling in a unified variational framework. We discuss a suite of techniques for molecular surface generation, molecular surface meshing, molecular volumetric meshing, and the estimation of Hadwiger’s functionals. Emphasis is given to the multiresolution representations of biomolecules and the associated multiscale electrostatic analyses as well as multiresolution curvature characterizations. The resulting fine resolution representations of a biomolecular system enable the detailed analysis of solvent-solute interaction, and ion channel dynamics, while our coarse resolution representations highlight the compatibility of protein-ligand bindings and possibility of protein-protein interactions. PMID:23813599

  14. Models of the Dynamic Deformations of Polymers

    NASA Astrophysics Data System (ADS)

    Merzhievsky, Lev; Voronin, Mihail; Korchagina, Anna

    2013-06-01

    In the process of deformation under the influence of external loading polymeric mediums show the complicated behavior connected with features of their structure. For amorphous polymers distinguish three physical conditions - glasslike, highlyelastic and viscoplastic. To each of the listed conditions there corresponds to mikro - meso- and macrostructural mechanisms of irreversible deformation. In the report the review of results of construction of models for the description of dynamic and shock-wave deformation of the polymers which are based on developed authors representations about mechanisms of irreversible deformation is made. Models include the formulation of the equations of conservation laws, considering effect of a relaxation of shear stresses in the process of deformation. For closing of models the equations of states with nonspherical tensor of deformations and relation for time of a relaxation of shear stresses are constructed. With using of the formulated models a number of problems of dynamic and shock wave deformations has been solved. The results are compared with corresponding experimental date. Development of the used approach are in summary discussed. To taking into account memory and fractal properties of real polymers is supposed of derivatives and integrals of a fractional order to use. Examples of constitutive equations with derivatives of a fractional order are presented. This work is supported by the Integration project of the Siberian Branch of the Russian Academy of Science 64 and grant RFBR 12-01-00726.

  15. MOEMS Modeling Using the Geometrical Matrix Toolbox

    NASA Technical Reports Server (NTRS)

    Wilson, William C.; Atkinson, Gary M.

    2005-01-01

    New technologies such as MicroOptoElectro-Mechanical Systems (MOEMS) require new modeling tools. These tools must simultaneously model the optical, electrical, and mechanical domains and the interactions between these domains. To facilitate rapid prototyping of these new technologies an optical toolbox has been developed for modeling MOEMS devices. The toolbox models are constructed using MATLAB's dynamical simulator, Simulink. Modeling toolboxes will allow users to focus their efforts on system design and analysis as opposed to developing component models. This toolbox was developed to facilitate rapid modeling and design of a MOEMS based laser ultrasonic receiver system.

  16. Geometric modeling of subcellular structures, organelles, and multiprotein complexes

    PubMed Central

    Feng, Xin; Xia, Kelin; Tong, Yiying; Wei, Guo-Wei

    2013-01-01

    SUMMARY Recently, the structure, function, stability, and dynamics of subcellular structures, organelles, and multi-protein complexes have emerged as a leading interest in structural biology. Geometric modeling not only provides visualizations of shapes for large biomolecular complexes but also fills the gap between structural information and theoretical modeling, and enables the understanding of function, stability, and dynamics. This paper introduces a suite of computational tools for volumetric data processing, information extraction, surface mesh rendering, geometric measurement, and curvature estimation of biomolecular complexes. Particular emphasis is given to the modeling of cryo-electron microscopy data. Lagrangian-triangle meshes are employed for the surface presentation. On the basis of this representation, algorithms are developed for surface area and surface-enclosed volume calculation, and curvature estimation. Methods for volumetric meshing have also been presented. Because the technological development in computer science and mathematics has led to multiple choices at each stage of the geometric modeling, we discuss the rationales in the design and selection of various algorithms. Analytical models are designed to test the computational accuracy and convergence of proposed algorithms. Finally, we select a set of six cryo-electron microscopy data representing typical subcellular complexes to demonstrate the efficacy of the proposed algorithms in handling biomolecular surfaces and explore their capability of geometric characterization of binding targets. This paper offers a comprehensive protocol for the geometric modeling of subcellular structures, organelles, and multiprotein complexes. PMID:23212797

  17. Geometric modeling of subcellular structures, organelles, and multiprotein complexes.

    PubMed

    Feng, Xin; Xia, Kelin; Tong, Yiying; Wei, Guo-Wei

    2012-12-01

    Recently, the structure, function, stability, and dynamics of subcellular structures, organelles, and multiprotein complexes have emerged as a leading interest in structural biology. Geometric modeling not only provides visualizations of shapes for large biomolecular complexes but also fills the gap between structural information and theoretical modeling, and enables the understanding of function, stability, and dynamics. This paper introduces a suite of computational tools for volumetric data processing, information extraction, surface mesh rendering, geometric measurement, and curvature estimation of biomolecular complexes. Particular emphasis is given to the modeling of cryo-electron microscopy data. Lagrangian-triangle meshes are employed for the surface presentation. On the basis of this representation, algorithms are developed for surface area and surface-enclosed volume calculation, and curvature estimation. Methods for volumetric meshing have also been presented. Because the technological development in computer science and mathematics has led to multiple choices at each stage of the geometric modeling, we discuss the rationales in the design and selection of various algorithms. Analytical models are designed to test the computational accuracy and convergence of proposed algorithms. Finally, we select a set of six cryo-electron microscopy data representing typical subcellular complexes to demonstrate the efficacy of the proposed algorithms in handling biomolecular surfaces and explore their capability of geometric characterization of binding targets. This paper offers a comprehensive protocol for the geometric modeling of subcellular structures, organelles, and multiprotein complexes.

  18. Post-buckling of geometrically imperfect shear-deformable flat panels under combined thermal and compressive edge loadings

    NASA Technical Reports Server (NTRS)

    Librescu, L.; Souza, M. A.

    1993-01-01

    The static post-buckling of simply-supported flat panels exposed to a stationary nonuniform temperature field and subjected to a system of subcritical in-plane compressive edge loads is investigated. The study is performed within a refined theory of composite laminated plates incorporating the effect of transverse shear and the geometric nonlinearities. The influence played by a number of effects, among them transverse shear deformation, initial geometric imperfections, the character of the in-plane boundary conditions and thickness ratio are studied and a series of conclusions are outlined. The influence played by the complete temperature field (i.e., the uniform through thickness and thickness-wise gradient) as compared to the one induced by only the uniform one, is discussed and the peculiarities of the resulting post-buckling behaviors are enlightened.

  19. Geometrical and physical properties of the 1982-84 deformation source at Campi Flegrei - Italy

    NASA Astrophysics Data System (ADS)

    Bonafede, Maurizio; Trasatti, Elisa; Giunchi, Carlo; Berrino, Giovanna

    2010-05-01

    Deformation of the ground surface in volcanic areas is generally recognized as a reliable indicator of unrest, possibly resulting from the intrusion of fresh magma within the shallow rock layers. The intrusion process is usually represented by a deformation source such as an ellipsoidal pressurized cavity, embedded within a homogeneous and elastic half-space. Similar source models allow inferring the depth, the location and the (incremental) volume of the intrusion, which are very important parameters for volcanic risk implications. However, assuming a homogeneous and elastic rheology and, assigning a priori the shape and the mechanism of the source (within a very restricted 'library' of available solutions) may bias considerably the inference of source parameters. In complete generality, any point source deformation, including overpressure sources, may be described in terms of a suitable moment tensor, while the assumption of an overpressure source strongly restricts the variety of allowable moment tensors. In particular, by assuming a pressurized cavity, we rule out the possibility that either shear failure may precede magma emplacement (seismically induced intrusion) or may accompany it (mixed tensile and shear mode fracture). Another possibility is that a pre-existent weakness plane may be chosen by the ascending magma (fracture toughness heterogeneity). We perform joint inversion of levelling and EDM data (part of latter are unpublished), collected during the 1982-84 unrest at Campi Flegrei caldera: a 43% misfit reduction is obtained for a general moment source if the elastic heterogeneities computed from seismic tomography are accouted for. The inferred source is at 5.2 km depth but cannot be interpreted as a simple pressurized cavity. Moreover, if mass conservation is accounted for, magma emplaced within a shallow source must come from a (generally deeper) reservoir, which is usually assumed to be deep enough to be simply neglected. At Campi Flegrei, seismic

  20. 3-D Geometric Modeling for the 21st Century.

    ERIC Educational Resources Information Center

    Ault, Holly K.

    1999-01-01

    Describes new geometric computer models used in contemporary computer-aided design (CAD) software including wire frame, surface, solid, and parametric models. Reviews their use in engineering design and discusses the impact of these new technologies on the engineering design graphics curriculum. (Author/CCM)

  1. Extended model of geometrical surface splitting in Monte Carlo

    SciTech Connect

    Dubi, A.; Dudziak, D.J.

    1983-04-01

    An analytic expression was derived for the second moment and average time of a model of geometrical splitting. Two limitations (among others) of the analyzed model were that particles were allowed to split only once on each surface and no Russian Roulette was applied on particles crossing a surface ''backward.'' Those serious limitations are removed.

  2. Geometric and electrostatic modeling using molecular rigidity functions

    DOE PAGESBeta

    Mu, Lin; Xia, Kelin; Wei, Guowei

    2017-03-01

    Geometric and electrostatic modeling is an essential component in computational biophysics and molecular biology. Commonly used geometric representations admit geometric singularities such as cusps, tips and self-intersecting facets that lead to computational instabilities in the molecular modeling. Our present work explores the use of flexibility and rigidity index (FRI), which has a proved superiority in protein B-factor prediction, for biomolecular geometric representation and associated electrostatic analysis. FRI rigidity surfaces are free of geometric singularities. We propose a rigidity based Poisson–Boltzmann equation for biomolecular electrostatic analysis. These approaches to surface and electrostatic modeling are validated by a set of 21 proteins.more » Our results are compared with those of established methods. Finally, being smooth and analytically differentiable, FRI rigidity functions offer excellent curvature analysis, which characterizes concave and convex regions on protein surfaces. Polarized curvatures constructed by using the product of minimum curvature and electrostatic potential is shown to predict potential protein–ligand binding sites.« less

  3. Cosmological models in Weyl geometrical scalar-tensor theory

    NASA Astrophysics Data System (ADS)

    Pucheu, M. L.; Alves Junior, F. A. P.; Barreto, A. B.; Romero, C.

    2016-09-01

    We investigate cosmological models in a recently proposed geometrical theory of gravity, in which the scalar field appears as part of the spacetime geometry. We extend the previous theory to include a scalar potential in the action. We solve the vacuum field equations for different choices of the scalar potential and give a detailed analysis of the solutions. We show that, in some cases, a cosmological scenario is found that seems to suggest the appearance of a geometric phase transition. We build a toy model, in which the accelerated expansion of the early Universe is driven by pure geometry.

  4. Decoherence of spin-deformed bosonic model

    SciTech Connect

    Dehdashti, Sh.; Mahdifar, A.; Bagheri Harouni, M.; Roknizadeh, R.

    2013-07-15

    The decoherence rate and some parameters affecting it are investigated for the generalized spin-boson model. We consider the spin-bosonic model when the bosonic environment is modeled by the deformed harmonic oscillators. We show that the state of the environment approaches a non-linear coherent state. Then, we obtain the decoherence rate of a two-level system which is in contact with a deformed bosonic environment which is either in thermal equilibrium or in the ground state. By using some recent realization of f-deformed oscillators, we show that some physical parameters strongly affect the decoherence rate of a two-level system. -- Highlights: •Decoherence of the generalized spin-boson model is considered. •In this model the environment consists of f-oscillators. •Via the interaction, the state of the environment approaches non-linear coherent states. •Effective parameters on decoherence are considered.

  5. Chewing simulation with a physically accurate deformable model.

    PubMed

    Pascale, Andra Maria; Ruge, Sebastian; Hauth, Steffen; Kordaß, Bernd; Linsen, Lars

    2015-01-01

    Nowadays, CAD/CAM software is being used to compute the optimal shape and position of a new tooth model meant for a patient. With this possible future application in mind, we present in this article an independent and stand-alone interactive application that simulates the human chewing process and the deformation it produces in the food substrate. Chewing motion sensors are used to produce an accurate representation of the jaw movement. The substrate is represented by a deformable elastic model based on the finite linear elements method, which preserves physical accuracy. Collision detection based on spatial partitioning is used to calculate the forces that are acting on the deformable model. Based on the calculated information, geometry elements are added to the scene to enhance the information available for the user. The goal of the simulation is to present a complete scene to the dentist, highlighting the points where the teeth came into contact with the substrate and giving information about how much force acted at these points, which therefore makes it possible to indicate whether the tooth is being used incorrectly in the mastication process. Real-time interactivity is desired and achieved within limits, depending on the complexity of the employed geometric models. The presented simulation is a first step towards the overall project goal of interactively optimizing tooth position and shape under the investigation of a virtual chewing process using real patient data (Fig 1). PMID:26389135

  6. Digital deformation model for fisheye image rectification.

    PubMed

    Hou, Wenguang; Ding, Mingyue; Qin, Nannan; Lai, Xudong

    2012-09-24

    Fisheye lens can provide a wide view over 180°. It then has prominence advantages in three dimensional reconstruction and machine vision applications. However, the serious deformation in the image limits fisheye lens's usage. To overcome this obstacle, a new rectification method named DDM (Digital Deformation Model) is developed based on two dimensional perspective transformation. DDM is a type of digital grid representation of the deformation of each pixel on CCD chip which is built by interpolating the difference between the actual image coordinate and pseudo-ideal coordinate of each mark on a control panel. This method obtains the pseudo-ideal coordinate according to two dimensional perspective transformation by setting four mark's deformations on image. The main advantages are that this method does not rely on the optical principle of fisheye lens and has relatively less computation. In applications, equivalent pinhole images can be obtained after correcting fisheye lens images using DDM.

  7. Digital deformation model for fisheye image rectification.

    PubMed

    Hou, Wenguang; Ding, Mingyue; Qin, Nannan; Lai, Xudong

    2012-09-24

    Fisheye lens can provide a wide view over 180°. It then has prominence advantages in three dimensional reconstruction and machine vision applications. However, the serious deformation in the image limits fisheye lens's usage. To overcome this obstacle, a new rectification method named DDM (Digital Deformation Model) is developed based on two dimensional perspective transformation. DDM is a type of digital grid representation of the deformation of each pixel on CCD chip which is built by interpolating the difference between the actual image coordinate and pseudo-ideal coordinate of each mark on a control panel. This method obtains the pseudo-ideal coordinate according to two dimensional perspective transformation by setting four mark's deformations on image. The main advantages are that this method does not rely on the optical principle of fisheye lens and has relatively less computation. In applications, equivalent pinhole images can be obtained after correcting fisheye lens images using DDM. PMID:23037373

  8. Geometric Modeling, Radiation Simulation, Rendering, Analysis Package

    1995-01-17

    RADIANCE is intended to aid lighting designers and architects by predicting the light levels and appearance of a space prior to construction. The package includes programs for modeling and translating scene geometry, luminaire data and material properties, all of which are needed as input to the simulation. The lighting simulation itself uses ray tracing techniques to compute radiance values (ie. the quantity of light passing through a specific point in a specific direction), which aremore » typically arranged to form a photographic quality image. The resulting image may be analyzed, displayed and manipulated within the package, and converted to other popular image file formats for export to other packages, facilitating the production of hard copy output.« less

  9. Geometric modeling for computer aided design

    NASA Technical Reports Server (NTRS)

    Schwing, James L.

    1992-01-01

    The goal was the design and implementation of software to be used in the conceptual design of aerospace vehicles. Several packages and design studies were completed, including two software tools currently used in the conceptual level design of aerospace vehicles. These tools are the Solid Modeling Aerospace Research Tool (SMART) and the Environment for Software Integration and Execution (EASIE). SMART provides conceptual designers with a rapid prototyping capability and additionally provides initial mass property analysis. EASIE provides a set of interactive utilities that simplify the task of building and executing computer aided design systems consisting of diverse, stand alone analysis codes that result in the streamlining of the exchange of data between programs, reducing errors and improving efficiency.

  10. Multiscale geometric modeling of macromolecules I: Cartesian representation

    PubMed Central

    Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo Wei

    2013-01-01

    This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the

  11. Multiscale geometric modeling of macromolecules I: Cartesian representation

    SciTech Connect

    Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei

    2014-01-15

    This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace–Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the

  12. Multiscale geometric modeling of macromolecules I: Cartesian representation

    NASA Astrophysics Data System (ADS)

    Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei

    2014-01-01

    This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the

  13. Geometric Aspects of Force Controllability for a Swimming Model

    SciTech Connect

    Khapalov, A. Y.

    2008-02-15

    We study controllability properties (swimming capabilities) of a mathematical model of an abstract object which 'swims' in the 2-D Stokes fluid. Our goal is to investigate how the geometric shape of this object affects the forces acting upon it. Such problems are of interest in biology and engineering applications dealing with propulsion systems in fluids.

  14. From Prototypes to Caricatures: Geometrical Models for Concept Typicality

    ERIC Educational Resources Information Center

    Ameel, Eef; Storms, Gert

    2006-01-01

    In three studies, we investigated to what extent a geometrical representation in a psychological space succeeds in predicting typicality in animal, natural food and artifact concepts and whether contrast categories contribute to the prediction. In Study 1, we compared the predictive value of a family resemblance-based prototype model with a…

  15. Geometric model from microscopic theory for nuclear absorption

    NASA Technical Reports Server (NTRS)

    John, Sarah; Townsend, Lawrence W.; Wilson, John W.; Tripathi, Ram K.

    1993-01-01

    A parameter-free geometric model for nuclear absorption is derived herein from microscopic theory. The expression for the absorption cross section in the eikonal approximation, taken in integral form, is separated into a geometric contribution that is described by an energy-dependent effective radius and two surface terms that cancel in an asymptotic series expansion. For collisions of light nuclei, an expression for the effective radius is derived from harmonic oscillator nuclear density functions. A direct extension to heavy nuclei with Woods-Saxon densities is made by identifying the equivalent half-density radius for the harmonic oscillator functions. Coulomb corrections are incorporated, and a simplified geometric form of the Bradt-Peters type is obtained. Results spanning the energy range from 1 MeV/nucleon to 1 GeV/nucleon are presented. Good agreement with experimental results is obtained.

  16. Model the Deformation and Failure of Solids

    2001-10-19

    EMU models the deformation and failure of solids based on a reformulated theory of continuum mechanics known as the Peridynamic model. This approach allows dynamic fracture and other failure mechanisms to be simulated with a minimum of mesh effeces and without a need for supplementary kinetic relations for crack growth. Penetration by a rigid projectile is also included in the code.

  17. Modelling deformation and fracture in confectionery wafers

    NASA Astrophysics Data System (ADS)

    Mohammed, Idris K.; Charalambides, Maria N.; Williams, J. Gordon; Rasburn, John

    2015-01-01

    The aim of this research is to model the deformation and fracture behaviour of brittle wafers often used in chocolate confectionary products. Three point bending and compression experiments were performed on beam and circular disc samples respectively to determine the 'apparent' stress-strain curves in bending and compression. The deformation of the wafer for both these testing types was observed in-situ within an SEM. The wafer is modeled analytically and numerically as a composite material with a core which is more porous than the skins. X-ray tomography was used to generate a three dimensional volume of the wafer microstructure which was then meshed and used for quantitative analysis. A linear elastic material model, with a damage function and element deletion, was used and the XMT generated architecture was loaded in compression. The output from the FE simulations correlates closely to the load-deflection deformation observed experimentally.

  18. Modelling deformation and fracture in confectionery wafers

    SciTech Connect

    Mohammed, Idris K.; Charalambides, Maria N.; Williams, J. Gordon; Rasburn, John

    2015-01-22

    The aim of this research is to model the deformation and fracture behaviour of brittle wafers often used in chocolate confectionary products. Three point bending and compression experiments were performed on beam and circular disc samples respectively to determine the 'apparent' stress-strain curves in bending and compression. The deformation of the wafer for both these testing types was observed in-situ within an SEM. The wafer is modeled analytically and numerically as a composite material with a core which is more porous than the skins. X-ray tomography was used to generate a three dimensional volume of the wafer microstructure which was then meshed and used for quantitative analysis. A linear elastic material model, with a damage function and element deletion, was used and the XMT generated architecture was loaded in compression. The output from the FE simulations correlates closely to the load-deflection deformation observed experimentally.

  19. Comparison and Analysis of Geometric Correction Models of Spaceborne SAR.

    PubMed

    Jiang, Weihao; Yu, Anxi; Dong, Zhen; Wang, Qingsong

    2016-01-01

    Following the development of synthetic aperture radar (SAR), SAR images have become increasingly common. Many researchers have conducted large studies on geolocation models, but little work has been conducted on the available models for the geometric correction of SAR images of different terrain. To address the terrain issue, four different models were compared and are described in this paper: a rigorous range-doppler (RD) model, a rational polynomial coefficients (RPC) model, a revised polynomial (PM) model and an elevation derivation (EDM) model. The results of comparisons of the geolocation capabilities of the models show that a proper model for a SAR image of a specific terrain can be determined. A solution table was obtained to recommend a suitable model for users. Three TerraSAR-X images, two ALOS-PALSAR images and one Envisat-ASAR image were used for the experiment, including flat terrain and mountain terrain SAR images as well as two large area images. Geolocation accuracies of the models for different terrain SAR images were computed and analyzed. The comparisons of the models show that the RD model was accurate but was the least efficient; therefore, it is not the ideal model for real-time implementations. The RPC model is sufficiently accurate and efficient for the geometric correction of SAR images of flat terrain, whose precision is below 0.001 pixels. The EDM model is suitable for the geolocation of SAR images of mountainous terrain, and its precision can reach 0.007 pixels. Although the PM model does not produce results as precise as the other models, its efficiency is excellent and its potential should not be underestimated. With respect to the geometric correction of SAR images over large areas, the EDM model has higher accuracy under one pixel, whereas the RPC model consumes one third of the time of the EDM model. PMID:27347973

  20. Comparison and Analysis of Geometric Correction Models of Spaceborne SAR

    PubMed Central

    Jiang, Weihao; Yu, Anxi; Dong, Zhen; Wang, Qingsong

    2016-01-01

    Following the development of synthetic aperture radar (SAR), SAR images have become increasingly common. Many researchers have conducted large studies on geolocation models, but little work has been conducted on the available models for the geometric correction of SAR images of different terrain. To address the terrain issue, four different models were compared and are described in this paper: a rigorous range-doppler (RD) model, a rational polynomial coefficients (RPC) model, a revised polynomial (PM) model and an elevation derivation (EDM) model. The results of comparisons of the geolocation capabilities of the models show that a proper model for a SAR image of a specific terrain can be determined. A solution table was obtained to recommend a suitable model for users. Three TerraSAR-X images, two ALOS-PALSAR images and one Envisat-ASAR image were used for the experiment, including flat terrain and mountain terrain SAR images as well as two large area images. Geolocation accuracies of the models for different terrain SAR images were computed and analyzed. The comparisons of the models show that the RD model was accurate but was the least efficient; therefore, it is not the ideal model for real-time implementations. The RPC model is sufficiently accurate and efficient for the geometric correction of SAR images of flat terrain, whose precision is below 0.001 pixels. The EDM model is suitable for the geolocation of SAR images of mountainous terrain, and its precision can reach 0.007 pixels. Although the PM model does not produce results as precise as the other models, its efficiency is excellent and its potential should not be underestimated. With respect to the geometric correction of SAR images over large areas, the EDM model has higher accuracy under one pixel, whereas the RPC model consumes one third of the time of the EDM model. PMID:27347973

  1. Comparison and Analysis of Geometric Correction Models of Spaceborne SAR.

    PubMed

    Jiang, Weihao; Yu, Anxi; Dong, Zhen; Wang, Qingsong

    2016-06-25

    Following the development of synthetic aperture radar (SAR), SAR images have become increasingly common. Many researchers have conducted large studies on geolocation models, but little work has been conducted on the available models for the geometric correction of SAR images of different terrain. To address the terrain issue, four different models were compared and are described in this paper: a rigorous range-doppler (RD) model, a rational polynomial coefficients (RPC) model, a revised polynomial (PM) model and an elevation derivation (EDM) model. The results of comparisons of the geolocation capabilities of the models show that a proper model for a SAR image of a specific terrain can be determined. A solution table was obtained to recommend a suitable model for users. Three TerraSAR-X images, two ALOS-PALSAR images and one Envisat-ASAR image were used for the experiment, including flat terrain and mountain terrain SAR images as well as two large area images. Geolocation accuracies of the models for different terrain SAR images were computed and analyzed. The comparisons of the models show that the RD model was accurate but was the least efficient; therefore, it is not the ideal model for real-time implementations. The RPC model is sufficiently accurate and efficient for the geometric correction of SAR images of flat terrain, whose precision is below 0.001 pixels. The EDM model is suitable for the geolocation of SAR images of mountainous terrain, and its precision can reach 0.007 pixels. Although the PM model does not produce results as precise as the other models, its efficiency is excellent and its potential should not be underestimated. With respect to the geometric correction of SAR images over large areas, the EDM model has higher accuracy under one pixel, whereas the RPC model consumes one third of the time of the EDM model.

  2. Influence of geometrical deformation and electric field on transport characteristics through carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Mouri, Masaaki; Ogawa, Matsuto; Souma, Satofumi

    2012-12-01

    We study computationally the electronic transport properties through mechanically squashed zigzag carbon nanotubes (CNTs) under the uniform electric field perpendicular to the tube axis, based on the tight-binding molecular dynamics method for the structural analysis and the Landauer-Büttiker's formalism for the transport analysis. Our simulations show that the band gaps of the zigzag carbon nanotubes exhibit nonlinear decrease as increasing the deformation ratio in the presence of the external perpendicular electric field, in contrast to the case of zero electric field, where the band gap decreases linearly as increasing the deformation ratio. Such properties allow us to tune the sensitivity of the electromechanical response in CNT devices by applying the external electric field.

  3. Mathematical modeling of deformation during hot rolling

    SciTech Connect

    Jin, D.; Stachowiak, R.G.; Samarasekera, I.V.; Brimacombe, J.K.

    1994-12-31

    The deformation that occurs in the roll bite during the hot rolling of steel, particularly the strain-rate and strain distribution, has been mathematically modeled using finite-element analysis. In this paper three different finite-element models are compared with one another and with industrial measurements. The first model is an Eulerian analysis based on the flow formulation method, while the second utilizes an Updated Lagrangian approach. The third model is based on a commercially available program DEFORM which also utilizes a Lagrangian reference frame. Model predictions of strain and strain-rate distribution, particularly near the surface of the slab, are strongly influenced by the treatment of friction at the boundary and the magnitude of the friction coefficient or shear factor. Roll forces predicted by the model have been compared with industrial rolling loads from a seven-stand hot-strip mill.

  4. Geometric-optical Modeling of a Conifer Forest Canopy

    NASA Technical Reports Server (NTRS)

    Strahler, A. H. (Principal Investigator)

    1985-01-01

    The objective of this research is to explore how the geometry of trees in forest stands influences the reflectance of the forest as imaged from space. Most plant canopy modeling has viewed the canopy as an assemblage of plane-parallel layers on top of a soil surface. For these models, leaf angle distribution, leaf area index, and the angular transmittance and reflectance of leaves are the primary optical and geometric parameters. Such models are now sufficiently well developed to explain most of the variance in angular reflectance measurements observed from homogeneous plant canopies. However, forest canopies as imaged by airborne and spaceborne scanners exhibit considerable variance at quite a different scale. Brightness values vary strongly from one pixel to the next primarily as a function of the number of trees they contain. At this scale, the forest canopy is nonuniform and discontinuous. This research focuses on a discrete-element, geometric-optical view of the forest canopy.

  5. Geometric comparison of popular mixture-model distances.

    SciTech Connect

    Mitchell, Scott A.

    2010-09-01

    Statistical Latent Dirichlet Analysis produces mixture model data that are geometrically equivalent to points lying on a regular simplex in moderate to high dimensions. Numerous other statistical models and techniques also produce data in this geometric category, even though the meaning of the axes and coordinate values differs significantly. A distance function is used to further analyze these points, for example to cluster them. Several different distance functions are popular amongst statisticians; which distance function is chosen is usually driven by the historical preference of the application domain, information-theoretic considerations, or by the desirability of the clustering results. Relatively little consideration is usually given to how distance functions geometrically transform data, or the distances algebraic properties. Here we take a look at these issues, in the hope of providing complementary insight and inspiring further geometric thought. Several popular distances, {chi}{sup 2}, Jensen - Shannon divergence, and the square of the Hellinger distance, are shown to be nearly equivalent; in terms of functional forms after transformations, factorizations, and series expansions; and in terms of the shape and proximity of constant-value contours. This is somewhat surprising given that their original functional forms look quite different. Cosine similarity is the square of the Euclidean distance, and a similar geometric relationship is shown with Hellinger and another cosine. We suggest a geodesic variation of Hellinger. The square-root projection that arises in Hellinger distance is briefly compared to standard normalization for Euclidean distance. We include detailed derivations of some ratio and difference bounds for illustrative purposes. We provide some constructions that nearly achieve the worst-case ratios, relevant for contours.

  6. Automatic segmentation of phase-correlated CT scans through nonrigid image registration using geometrically regularized free-form deformation

    SciTech Connect

    Shekhar, Raj; Lei, Peng; Castro-Pareja, Carlos R.; Plishker, William L.; D'Souza, Warren D.

    2007-07-15

    Conventional radiotherapy is planned using free-breathing computed tomography (CT), ignoring the motion and deformation of the anatomy from respiration. New breath-hold-synchronized, gated, and four-dimensional (4D) CT acquisition strategies are enabling radiotherapy planning utilizing a set of CT scans belonging to different phases of the breathing cycle. Such 4D treatment planning relies on the availability of tumor and organ contours in all phases. The current practice of manual segmentation is impractical for 4D CT, because it is time consuming and tedious. A viable solution is registration-based segmentation, through which contours provided by an expert for a particular phase are propagated to all other phases while accounting for phase-to-phase motion and anatomical deformation. Deformable image registration is central to this task, and a free-form deformation-based nonrigid image registration algorithm will be presented. Compared with the original algorithm, this version uses novel, computationally simpler geometric constraints to preserve the topology of the dense control-point grid used to represent free-form deformation and prevent tissue fold-over. Using mean squared difference as an image similarity criterion, the inhale phase is registered to the exhale phase of lung CT scans of five patients and of characteristically low-contrast abdominal CT scans of four patients. In addition, using expert contours for the inhale phase, the corresponding contours were automatically generated for the exhale phase. The accuracy of the segmentation (and hence deformable image registration) was judged by comparing automatically segmented contours with expert contours traced directly in the exhale phase scan using three metrics: volume overlap index, root mean square distance, and Hausdorff distance. The accuracy of the segmentation (in terms of radial distance mismatch) was approximately 2 mm in the thorax and 3 mm in the abdomen, which compares favorably to the

  7. Workshop on the Integration of Finite Element Modeling with Geometric Modeling

    NASA Technical Reports Server (NTRS)

    Wozny, Michael J.

    1987-01-01

    The workshop on the Integration of Finite Element Modeling with Geometric Modeling was held on 12 May 1987. It was held to discuss the geometric modeling requirements of the finite element modeling process and to better understand the technical aspects of the integration of these two areas. The 11 papers are presented except for one for which only the abstract is given.

  8. Characterization and modeling of heterogeneous deformation in commercial purity titanium

    SciTech Connect

    Yang, Y; Wang, Leyun; Zambaldi, Dr C; Eisenlohr, P; Barabash, Rozaliya; Liu, W.; Stoudt, Dr M R; Crimp, Prof M A; Bieler, Prof T R

    2011-01-01

    Heterogeneous deformation, including local dislocation shear activity and lattice rotation, was analyzed in microstructure patches of polycrystalline commercial purity titanium specimens using three different experimental methods. The measurements were compared with crystal plasticity finite element (CPFE) simulations for the same region that incorporate a local phenomenological hardening constitutive model. The dislocation activity was measured using techniques associated with atomic force microscopy (AFM), confocal microscopy, three-dimensional-X-ray diffraction (3D-XRD), and nano-indentation. These measurements allow assessment and guidance for strategic improvement of the accuracy of CPFE model development. The CPFE model successfully predicted most types of active dislocation systems within grains at the correct magnitudes, but the simulation of spatial distribution of strain was not always similar to experimental observations. To obtain an accurate CPFE model, the critical resolved shear stresses for major deformation systems in -titanium were assessed using an optimization strategy with CPFE predictions of the measured pile-up topography surrounding axisymmetric nano-indentation. Only modest improvements were noted over the simulations done without such optimized parameters. This indicates that a major challenge for model development is to effectively predict conditions where slip transfer occurs, and where geometrically necessary dislocations (GND) accumulate.

  9. Liquid Ropes: A Geometrical Model for Thin Viscous Jet Instabilities

    NASA Astrophysics Data System (ADS)

    Brun, P.-T.; Audoly, Basile; Ribe, Neil M.; Eaves, T. S.; Lister, John R.

    2015-05-01

    Thin, viscous fluid threads falling onto a moving belt behave in a way reminiscent of a sewing machine, generating a rich variety of periodic stitchlike patterns including meanders, W patterns, alternating loops, and translated coiling. These patterns form to accommodate the difference between the belt speed and the terminal velocity at which the falling thread strikes the belt. Using direct numerical simulations, we show that inertia is not required to produce the aforementioned patterns. We introduce a quasistatic geometrical model which captures the patterns, consisting of three coupled ordinary differential equations for the radial deflection, the orientation, and the curvature of the path of the thread's contact point with the belt. The geometrical model reproduces well the observed patterns and the order in which they appear as a function of the belt speed.

  10. Geometric assortative growth model for small-world networks.

    PubMed

    Shang, Yilun

    2014-01-01

    It has been shown that both humanly constructed and natural networks are often characterized by small-world phenomenon and assortative mixing. In this paper, we propose a geometrically growing model for small-world networks. The model displays both tunable small-world phenomenon and tunable assortativity. We obtain analytical solutions of relevant topological properties such as order, size, degree distribution, degree correlation, clustering, transitivity, and diameter. It is also worth noting that the model can be viewed as a generalization for an iterative construction of Farey graphs. PMID:24578661

  11. Geometric Assortative Growth Model for Small-World Networks

    PubMed Central

    2014-01-01

    It has been shown that both humanly constructed and natural networks are often characterized by small-world phenomenon and assortative mixing. In this paper, we propose a geometrically growing model for small-world networks. The model displays both tunable small-world phenomenon and tunable assortativity. We obtain analytical solutions of relevant topological properties such as order, size, degree distribution, degree correlation, clustering, transitivity, and diameter. It is also worth noting that the model can be viewed as a generalization for an iterative construction of Farey graphs. PMID:24578661

  12. Geometric assortative growth model for small-world networks.

    PubMed

    Shang, Yilun

    2014-01-01

    It has been shown that both humanly constructed and natural networks are often characterized by small-world phenomenon and assortative mixing. In this paper, we propose a geometrically growing model for small-world networks. The model displays both tunable small-world phenomenon and tunable assortativity. We obtain analytical solutions of relevant topological properties such as order, size, degree distribution, degree correlation, clustering, transitivity, and diameter. It is also worth noting that the model can be viewed as a generalization for an iterative construction of Farey graphs.

  13. Geometrical measurement of cardiac wavelength in reaction-diffusion models

    NASA Astrophysics Data System (ADS)

    Dupraz, Marie; Jacquemet, Vincent

    2014-09-01

    The dynamics of reentrant arrhythmias often consists in multiple wavelets propagating throughout an excitable medium. An arrhythmia can be sustained only if these reentrant waves have a sufficiently short wavelength defined as the distance traveled by the excitation wave during its refractory period. In a uniform medium, wavelength may be estimated as the product of propagation velocity and refractory period (electrophysiological wavelength). In order to accurately measure wavelength in more general substrates relevant to atrial arrhythmias (heterogeneous and anisotropic), we developed a mathematical framework to define geometrical wavelength at each time instant based on the length of streamlines following the propagation velocity field within refractory regions. Two computational methods were implemented: a Lagrangian approach in which a set of streamlines were integrated, and an Eulerian approach in which wavelength was the solution of a partial differential equation. These methods were compared in 1D/2D tissues and in a model of the left atrium. An advantage of geometrical definition of wavelength is that the wavelength of a wavelet can be tracked over time with high temporal resolution and smaller temporal variability in an anisotropic and heterogeneous medium. The results showed that the average electrophysiological wavelength was consistent with geometrical measurements of wavelength. Wavelets were however often shorter than the electrophysiological wavelength due to interactions with boundaries and other wavelets. These tools may help to assess more accurately the relation between substrate properties and wavelet dynamics in computer models.

  14. Reversible intermolecular E-H oxidative addition to a geometrically deformed and structurally dynamic phosphorous triamide.

    PubMed

    Zhao, Wei; McCarthy, Sean M; Lai, Ting Yi; Yennawar, Hemant P; Radosevich, Alexander T

    2014-12-17

    The synthesis and reactivity of geometrically constrained tricoordinate phosphorus (σ(3)-P) compounds supported by tridentate triamide chelates (N[o-NR-C6H4]2(3-); R = Me or (i)Pr) are reported. Studies indicate that 2 (P{N[o-NMe-C6H4]2}) adopts a Cs-symmetric structure in the solid state. Variable-temperature NMR studies demonstrate a low-energy inversion at phosphorus in solution (ΔG(‡)(exptl)(298) = 10.7(5) kcal/mol), for which DFT calculations implicate an edge-inversion mechanism via a metastable C2-symmetric intermediate. In terms of reactivity, compound 2 exhibits poor nucleophilicity, but undergoes oxidative addition at ambient temperature of diverse O-H- and N-H-containing compounds (including alcohols, phenols, carboxylic acids, amines, and anilines). The resulting pentacoordinate adducts 2·[H][OR] and 2·[H][NHR] are characterized by multinuclear NMR spectroscopy and X-ray crystallography, and their structures (which span the pseudorotation coordinate between trigonal bipyramidal and square planar) are evaluated in terms of negative hyperconjugation. At elevated temperatures, the oxidative addition is shown to be reversible for volatile alcohols and amines.

  15. A digital video model deformation system

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Snow, W. L.; Goad, W. K.; Childers, B. A.

    1987-01-01

    The use of solid-state array cameras and a PC-controlled image acquisition system to measure model deformation in a wind tunnel is discussed. This digital system improves an earlier video model deformation system that used high-resolution tube cameras and required the manual measurement of targets on video hardcopy images. The new system eliminates both the vibration-induced distortion associated with tube cameras and the manual readup of video images necessary in the earlier version. Camera calibration and data reduction procedures necessary to convert pixel image plane data from two cameras into wing deflections are presented. Laboratory tests to establish the uncertainty of the system with the geometry to be used are described.

  16. Geometric Aspects of Ground Augmentation of Satellite Networks for the Needs of Deformation Monitoring

    NASA Astrophysics Data System (ADS)

    Protaziuk, Elżbieta

    2016-06-01

    Satellite measurements become competitive in many tasks of engineering surveys, however, in many requiring applications possibilities to apply such solutions are still limited. The possibility to widely apply satellite technologies for displacements measurements is related with new challenges; the most important of them relate to increasing requirements concerning the accuracy, reliability and continuity of results of position determination. One of the solutions is a ground augmentation of satellite network, which intention is to improve precision of positioning, ensure comparable accuracy of coordinates and reduce precision fluctuations over time. The need for augmentation of GNSS is particularly significant in situations: where the visibility of satellites is poor because of terrain obstacles, when the determined position is not precise enough or a satellites constellation does not allow for reliable positioning. Ground based source/sources of satellite signal placed at a ground, called pseudosatellites, or pseudolites were intensively investigated during the last two decades and finally were developed into groundbased, time-synchronized transceivers, that can transmit and receive a proprietary positioning signal. The paper presents geometric aspects of the ground based augmentation of the satellite networks using various quality measures of positioning geometry, which depends on access to the constellation of satellites and the conditions of the observation environment. The issue of minimizing these measures is the key problem that allows to obtain the position with high accuracy. For this purpose, the use of an error ellipsoid is proposed and compared with an error ellipse. The paper also describes the results of preliminary accuracy analysis obtained at test area and a comparison of various measures of the quality of positioning geometry.

  17. Subjective surfaces: a geometric model for boundary completion

    SciTech Connect

    Sarti, Alessandro; Malladi, Ravi; Sethian, J.A.

    2000-06-01

    We present a geometric model and a computational method for segmentation of images with missing boundaries. In many situations, the human visual system fills in missing gaps in edges and boundaries, building and completing information that is not present. Boundary completion presents a considerable challenge in computer vision, since most algorithms attempt to exploit existing data. A large body of work concerns completion models, which postulate how to construct missing data; these models are often trained and specific to particular images. In this paper, we take the following, alternative perspective: we consider a reference point within an image as given, and then develop an algorithm which tries to build missing information on the basis of the given point of view and the available information as boundary data to the algorithm. Starting from this point of view, a surface is constructed. It is then evolved with the mean curvature flow in the metric induced by the image until a piecewise constant solution is reached. We test the computational model on modal completion, amodal completion, texture, photo and medical images. We extend the geometric model and the algorithm to 3D in order to extract shapes from low signal/noise ratio medical volumes. Results in 3D echocardiography and 3D fetal echography are presented.

  18. Numerical treatment of a geometrically nonlinear planar Cosserat shell model

    NASA Astrophysics Data System (ADS)

    Sander, Oliver; Neff, Patrizio; Bîrsan, Mircea

    2016-05-01

    We present a new way to discretize a geometrically nonlinear elastic planar Cosserat shell. The kinematical model is similar to the general six-parameter resultant shell model with drilling rotations. The discretization uses geodesic finite elements (GFEs), which leads to an objective discrete model which naturally allows arbitrarily large rotations. GFEs of any approximation order can be constructed. The resulting algebraic problem is a minimization problem posed on a nonlinear finite-dimensional Riemannian manifold. We solve this problem using a Riemannian trust-region method, which is a generalization of Newton's method that converges globally without intermediate loading steps. We present the continuous model and the discretization, discuss the properties of the discrete model, and show several numerical examples, including wrinkling of thin elastic sheets in shear.

  19. Geometrical clusters of Darcy's reservoir model and Ising universality class

    NASA Astrophysics Data System (ADS)

    Najafi, M. N.; Ghaedi, M.

    2015-06-01

    In this paper the geometrical features of the fluid propagation in two-dimensional petroleum reservoir described by Darcy equations are studied. The porous media are considered to be tuned by the occupancy parameter p being the probability that a pore is occupied. We analyze the statistical geometrical observables of the Darcy model. To this end we let the water to be injected into random sites of the porous media and solve numerically the Darcy equations to describe the flow motion pattern, using the control volume finite difference (CVFD) method. The fractal dimension of the frontier of the avalanches (defined as the set of the sites through which the fluid passed) and the distribution functions of gyration radius, loop length and cluster mass are numerically obtained revealing that at p =pc (the critical occupancy parameter above which there is definitely a spanning cluster in the system) this model lies within a universality class compatible with the Ising model. We observe that for p >pc, although the model shows critical behaviors, this duality is broken. The mentioned exponents are reported in this paper.

  20. High-fidelity geometric modeling for biomedical applications

    SciTech Connect

    Yu, Zeyun; Holst, Michael J.; Andrew McCammon, J.

    2008-05-19

    In this paper, we describe a combination of algorithms for high-fidelity geometric modeling and mesh generation. Although our methods and implementations are application-neutral, our primary target application is multiscale biomedical models that range in scales across the molecular, cellular, and organ levels. Our software toolchain implementing these algorithms is general in the sense that it can take as input a molecule in PDB/PQR forms, a 3D scalar volume, or a user-defined triangular surface mesh that may have very low quality. The main goal of our work presented is to generate high quality and smooth surface triangulations from the aforementioned inputs, and to reduce the mesh sizes by mesh coarsening. Tetrahedral meshes are also generated for finite element analysis in biomedical applications. Experiments on a number of bio-structures are demonstrated, showing that our approach possesses several desirable properties: feature-preservation, local adaptivity, high quality, and smoothness (for surface meshes). Finally, the availability of this software toolchain will give researchers in computational biomedicine and other modeling areas access to higher-fidelity geometric models.

  1. Modelling highly deformable metal extrusion using SPH

    NASA Astrophysics Data System (ADS)

    Prakash, Mahesh; Cleary, Paul W.

    2015-05-01

    Computational modelling is often used to reduce trial extrusions through accurate defect prediction. Traditionally, metal extrusion is modelled using mesh based finite element methods. However, large plastic deformations can lead to heavy re-meshing and numerical diffusion. Here we use the mesh-less smoothed particle hydrodynamics method since it allows simulation of large deformations without re-meshing and the tracking of history dependent properties such as plastic strain making it suitable for defect prediction. The variation in plastic strain and deformation for aluminium alloy in a cylindrical 3D geometry with extrusion ratio and die angle is evaluated. The extrusion process is found to have three distinct phases consisting of an initial sharp rise in extrusion force, a steady phase requiring constant force and terminating in a sharp decline in force as metal is completely extruded. Deformation and plastic strain increased significantly with extrusion ratio but only moderately with die angle. Extrusion force increased by 150 % as the extrusion ratio increased from 2:1 to 4:1 but had only a marginal change with die angle. A low strain zone in the centre of the extruded product was found to be a function of extrusion ratio but was persistent and did not vary with die angle. Simulation of a complex 3D building industry component showed large variations in plastic strain along the length of the product at two scales. These were due to change in metal behaviour as extrusion progressed from phase 1 to phase 2. A stagnation zone at the back of the die was predicted that could lead to the "funnel" or "pipe" defect.

  2. Geometric modeling of inflatable structures for lunar base.

    PubMed

    Nowak, P S; Sadeh, W Z; Morroni, L A

    1992-07-01

    A modular inflatable structure consisting of thin, composite membranes is presented for use in a lunar base. Results from a linear elastic analysis of the structure indicate that it is feasible in the lunar environment. Further analysis requires solving nonlinear equations and accurately specifying the geometries of the structural members. A computerized geometric modeling technique, using bicubic Bezier surfaces to generate the geometries of the inflatable structure, was conducted. Simulated results are used to create three-dimensional wire frames and solid renderings of the individual components of the inflatable structure. The component geometries are connected into modules, which are then assembled based upon the desired architecture of the structure. PMID:11537646

  3. Mask roughness induced LER: geometric model at long correlation lengths

    SciTech Connect

    McClinton, Brittany M.; Naulleau, Patrick P.

    2011-02-11

    Collective understanding of how both the resist and line-edge roughness (LER) on the mask affect the final printed LER has made significant advances. What is poorly understood, however, is the extent to which mask surface roughness couples to image plane LER as a function of illumination conditions, NA, and defocus. Recently, progress has been made in formulating a simplified solution for mask roughness induced LER. Here, we investigate the LER behavior at long correlation lengths of surface roughness on the mask. We find that for correlation lengths greater than 3/NA in wafer dimensions and CDs greater than approximately 0.75/NA, the previously described simplified model, which remains based on physical optics, converges to a 'geometric regime' which is based on ray optics and is independent of partial coherence. In this 'geometric regime', the LER is proportional to the mask slope error as it propagates through focus, and provides a faster alternative to calculating LER in contrast to either full 2D aerial image simulation modeling or the newly proposed physical optics model. Data is presented for both an NA = 0.32 and an NA = 0.5 imaging system for CDs of 22-nm and 50-nm horizontal-line-dense structures.

  4. A tumor growth model with deformable ECM

    PubMed Central

    Sciumè, G; Santagiuliana, R; Ferrari, M; Decuzzi, P; Schrefler, B A

    2015-01-01

    Existing tumor growth models based on fluid analogy for the cells do not generally include the extracellular matrix (ECM), or if present, take it as rigid. The three-fluid model originally proposed by the authors and comprising tumor cells (TC), host cells (HC), interstitial fluid (IF) and an ECM, considered up to now only a rigid ECM in the applications. This limitation is here relaxed and the deformability of the ECM is investigated in detail. The ECM is modeled as a porous solid matrix with Green-elastic and elasto-visco-plastic material behavior within a large strain approach. Jauman and Truesdell objective stress measures are adopted together with the deformation rate tensor. Numerical results are first compared with those of a reference experiment of a multicellular tumor spheroid (MTS) growing in vitro, then three different tumor cases are studied: growth of an MTS in a decellularized ECM, growth of a spheroid in the presence of host cells and growth of a melanoma. The influence of the stiffness of the ECM is evidenced and comparison with the case of a rigid ECM is made. The processes in a deformable ECM are more rapid than in a rigid ECM and the obtained growth pattern differs. The reasons for this are due to the changes in porosity induced by the tumor growth. These changes are inhibited in a rigid ECM. This enhanced computational model emphasizes the importance of properly characterizing the biomechanical behavior of the malignant mass in all its components to correctly predict its temporal and spatial pattern evolution. PMID:25427284

  5. A population-based model to describe geometrical uncertainties in radiotherapy: applied to prostate cases

    NASA Astrophysics Data System (ADS)

    Budiarto, E.; Keijzer, M.; Storchi, P. R.; Hoogeman, M. S.; Bondar, L.; Mutanga, T. F.; de Boer, H. C. J.; Heemink, A. W.

    2011-02-01

    Local motions and deformations of organs between treatment fractions introduce geometrical uncertainties into radiotherapy. These uncertainties are generally taken into account in the treatment planning by enlarging the radiation target by a margin around the clinical target volume. However, a practical method to fully include these uncertainties is still lacking. This paper proposes a model based on the principal component analysis to describe the patient-specific local probability distributions of voxel motions so that the average values and variances of the dose distribution can be calculated and fully used later in inverse treatment planning. As usually only a very limited number of data for new patients is available; in this paper the analysis is extended to use population data. A basic assumption (which is justified retrospectively in this paper) is that general movements and deformations of a specific organ are similar despite variations in the shapes of the organ over the population. A proof of principle of the method for deformations of the prostate and the seminal vesicles is presented.

  6. SU-E-J-94: Geometric and Dosimetric Evaluation of Deformation Image Registration Algorithms Using Virtual Phantoms Generated From Patients with Lung Cancer

    SciTech Connect

    Shen, Z; Greskovich, J; Xia, P; Bzdusek, K

    2015-06-15

    Purpose: To generate virtual phantoms with clinically relevant deformation and use them to objectively evaluate geometric and dosimetric uncertainties of deformable image registration (DIR) algorithms. Methods: Ten lung cancer patients undergoing adaptive 3DCRT planning were selected. For each patient, a pair of planning CT (pCT) and replanning CT (rCT) were used as the basis for virtual phantom generation. Manually adjusted meshes were created for selected ROIs (e.g. PTV, lungs, spinal cord, esophagus, and heart) on pCT and rCT. The mesh vertices were input into a thin-plate spline algorithm to generate a reference displacement vector field (DVF). The reference DVF was used to deform pCT to generate a simulated replanning CT (srCT) that was closely matched to rCT. Three DIR algorithms (Demons, B-Spline, and intensity-based) were applied to these ten virtual phantoms. The images, ROIs, and doses were mapped from pCT to srCT using the DVFs computed by these three DIRs and compared to those mapped using the reference DVF. Results: The average Dice coefficients for selected ROIs were from 0.85 to 0.96 for Demons, from 0.86 to 0.97 for intensity-based, and from 0.76 to 0.95 for B-Spline. The average Hausdorff distances for selected ROIs were from 2.2 to 5.4 mm for Demons, from 2.3 to 6.8 mm for intensity-based, and from 2.4 to 11.4 mm for B-Spline. The average absolute dose errors for selected ROIs were from 0.2 to 0.6 Gy for Demons, from 0.1 to 0.5 Gy for intensity-based, and from 0.5 to 1.5 Gy for B-Spline. Conclusion: Virtual phantoms were modeled after patients with lung cancer and were clinically relevant for adaptive radiotherapy treatment replanning. Virtual phantoms with known DVFs serve as references and can provide a fair comparison when evaluating different DIRs. Demons and intensity-based DIRs were shown to have smaller geometric and dosimetric uncertainties than B-Spline. Z Shen: None; K Bzdusek: an employee of Philips Healthcare; J Greskovich: None; P Xia

  7. The geometric phase analysis method based on the local high resolution discrete Fourier transform for deformation measurement

    NASA Astrophysics Data System (ADS)

    Dai, Xianglu; Xie, Huimin; Wang, Huaixi; Li, Chuanwei; Liu, Zhanwei; Wu, Lifu

    2014-02-01

    The geometric phase analysis (GPA) method based on the local high resolution discrete Fourier transform (LHR-DFT) for deformation measurement, defined as LHR-DFT GPA, is proposed to improve the measurement accuracy. In the general GPA method, the fundamental frequency of the image plays a crucial role. However, the fast Fourier transform, which is generally employed in the general GPA method, could make it difficult to locate the fundamental frequency accurately when the fundamental frequency is not located at an integer pixel position in the Fourier spectrum. This study focuses on this issue and presents a LHR-DFT algorithm that can locate the fundamental frequency with sub-pixel precision in a specific frequency region for the GPA method. An error analysis is offered and simulation is conducted to verify the effectiveness of the proposed method; both results show that the LHR-DFT algorithm can accurately locate the fundamental frequency and improve the measurement accuracy of the GPA method. Furthermore, typical tensile and bending tests are carried out and the experimental results verify the effectiveness of the proposed method.

  8. Modeling Connectionist Networks: Categorical, Geometric Aspects (Towards ``Homomorphic Learning'')

    NASA Astrophysics Data System (ADS)

    Pfalzgraf, Jochen

    2004-08-01

    Work in interdisciplinary fields is very interesting and always a great challenge. We present work on applications of mathematical methods to modeling problems arising in the area of artificial neural networks (ANN). We concentrate on modeling network structures that are motivated and based on knowledge about net structures coming from neurophysiology. In past years such insights have been exploited already in computer based ANN-simulations which are well suited for industrial applications. In the analysis of network structures, considering assemblies of cells (neurons) in biological nets, from a geometric point of view one can indentify and interpret, locally, what is called a geometric configuration. Following notions from algebraic topology, we are speaking about simplicial configurations (e.g. triangular, tetrahedral configurations, etc.). It turns out that category theory, geometry, algebra (group theory), graph theory (more general, net theory) come together, in a natural interdisciplinary way. Simplices are of basic importance.The interpretation of a learning step as a morphism in categorical terms suggests the opening of a systematic theory of learning (we call it "Homomorphic Learning").

  9. Discrete element modelling of subglacial sediment deformation

    NASA Astrophysics Data System (ADS)

    Christensen, A. D.; Egholm, D. L.; Piotrowski, J. A.; Tulaczyk, S.

    2012-04-01

    Soft, deformable sediments are often present under glaciers. Subglacial sediments deform under the differential load of the ice, and this causes the overlying glacier to accelerate its motion. Understanding the rheology of subglacial sediment is therefore important for models of glacial dynamics. Previous studies of the mechanical behaviour of subglacial sediments have primarily relied on analytical considerations and laboratory shearing experiments. As a novel approach, the Discrete Element Method (DEM) is used to explore the highly nonlinear dynamics of a granular bed that is exposed to stress conditions comparable to subglacial environments. The numerical approach allows close monitoring of the mechanical and rheological behaviour under a range of conditions. Of special interest is bed shear strength, strain distribution and -localization, mode of deformation, and role of effective normal pressure during shearing. As a calibration benchmark, results from laboratory ring-shear experiments on granular material are compared to similar numerical experiments. The continuously recorded stress dynamics in the laboratory shear experiments are compared to DEM experiments, and the micro-mechanical parameters in the contact model of the DEM code are calibrated to match the macroscopic Mohr-Coulomb failure criteria parameters, constrained from successive laboratory shear tests under a range of normal pressures. The data-parallel nature of the basic DEM formulation makes the problem ideal for utilizing the high arithmetic potential of modern general-purpose GPUs. Using the Nvidia Cuda C toolkit, the algorithm is formulated for spherical particles in three dimensions with a soft-body contact model. Scene rendering is performed using a custom Cuda ray-tracing algorithm. Efforts on optimization of the particle algorithm are discussed, and future plans of expansion are presented.

  10. Finite element modelling of squirrel, guinea pig and rat skulls: using geometric morphometrics to assess sensitivity.

    PubMed

    Cox, P G; Fagan, M J; Rayfield, E J; Jeffery, N

    2011-12-01

    Rodents are defined by a uniquely specialized dentition and a highly complex arrangement of jaw-closing muscles. Finite element analysis (FEA) is an ideal technique to investigate the biomechanical implications of these specializations, but it is essential to understand fully the degree of influence of the different input parameters of the FE model to have confidence in the model's predictions. This study evaluates the sensitivity of FE models of rodent crania to elastic properties of the materials, loading direction, and the location and orientation of the models' constraints. Three FE models were constructed of squirrel, guinea pig and rat skulls. Each was loaded to simulate biting on the incisors, and the first and the third molars, with the angle of the incisal bite varied over a range of 45°. The Young's moduli of the bone and teeth components were varied between limits defined by findings from our own and previously published tests of material properties. Geometric morphometrics (GMM) was used to analyse the resulting skull deformations. Bone stiffness was found to have the strongest influence on the results in all three rodents, followed by bite position, and then bite angle and muscle orientation. Tooth material properties were shown to have little effect on the deformation of the skull. The effect of bite position varied between species, with the mesiodistal position of the biting tooth being most important in squirrels and guinea pigs, whereas bilateral vs. unilateral biting had the greatest influence in rats. A GMM analysis of isolated incisor deformations showed that, for all rodents, bite angle is the most important parameter, followed by elastic properties of the tooth. The results here elucidate which input parameters are most important when defining the FE models, but also provide interesting glimpses of the biomechanical differences between the three skulls, which will be fully explored in future publications. PMID:21974720

  11. Classifying geometric variability by dominant eigenmodes of deformation in regressing tumours during active breath-hold lung cancer radiotherapy.

    PubMed

    Badawi, Ahmed M; Weiss, Elisabeth; Sleeman, William C; Hugo, Geoffrey D

    2012-01-21

    The purpose of this study is to develop and evaluate a lung tumour interfraction geometric variability classification scheme as a means to guide adaptive radiotherapy and improve measurement of treatment response. Principal component analysis (PCA) was used to generate statistical shape models of the gross tumour volume (GTV) for 12 patients with weekly breath hold CT scans. Each eigenmode of the PCA model was classified as 'trending' or 'non-trending' depending on whether its contribution to the overall GTV variability included a time trend over the treatment course. Trending eigenmodes were used to reconstruct the original semi-automatically delineated GTVs into a reduced model containing only time trends. Reduced models were compared to the original GTVs by analyzing the reconstruction error in the GTV and position. Both retrospective (all weekly images) and prospective (only the first four weekly images) were evaluated. The average volume difference from the original GTV was 4.3% ± 2.4% for the trending model. The positional variability of the GTV over the treatment course, as measured by the standard deviation of the GTV centroid, was 1.9 ± 1.4 mm for the original GTVs, which was reduced to 1.2 ± 0.6 mm for the trending-only model. In 3/13 cases, the dominant eigenmode changed class between the prospective and retrospective models. The trending-only model preserved GTV and shape relative to the original GTVs, while reducing spurious positional variability. The classification scheme appears feasible for separating types of geometric variability by time trend.

  12. Classifying geometric variability by dominant eigenmodes of deformation in regressing tumours during active breath-hold lung cancer radiotherapy

    NASA Astrophysics Data System (ADS)

    Badawi, Ahmed M.; Weiss, Elisabeth; Sleeman, William C., IV; Hugo, Geoffrey D.

    2012-01-01

    The purpose of this study is to develop and evaluate a lung tumour interfraction geometric variability classification scheme as a means to guide adaptive radiotherapy and improve measurement of treatment response. Principal component analysis (PCA) was used to generate statistical shape models of the gross tumour volume (GTV) for 12 patients with weekly breath hold CT scans. Each eigenmode of the PCA model was classified as ‘trending’ or ‘non-trending’ depending on whether its contribution to the overall GTV variability included a time trend over the treatment course. Trending eigenmodes were used to reconstruct the original semi-automatically delineated GTVs into a reduced model containing only time trends. Reduced models were compared to the original GTVs by analyzing the reconstruction error in the GTV and position. Both retrospective (all weekly images) and prospective (only the first four weekly images) were evaluated. The average volume difference from the original GTV was 4.3% ± 2.4% for the trending model. The positional variability of the GTV over the treatment course, as measured by the standard deviation of the GTV centroid, was 1.9 ± 1.4 mm for the original GTVs, which was reduced to 1.2 ± 0.6 mm for the trending-only model. In 3/13 cases, the dominant eigenmode changed class between the prospective and retrospective models. The trending-only model preserved GTV and shape relative to the original GTVs, while reducing spurious positional variability. The classification scheme appears feasible for separating types of geometric variability by time trend.

  13. Classifying geometric variability by dominant eigenmodes of deformation in regressing tumours during active breath hold lung cancer radiotherapy

    PubMed Central

    Badawi, Ahmed M.; Weiss, Elisabeth; Sleeman, William C.

    2012-01-01

    The purpose of this study is to develop and evaluate a lung tumour interfraction geometric variability classification scheme as a means to guide adaptive radiotherapy and improve measurement of treatment response. Principal component analysis (PCA) was used to generate statistical shape models of the gross tumour volume (GTV) for 12 patients with weekly breath hold CT scans. Each eigenmode of the PCA model was classified as ‘trending’ or ‘non-trending’ depending on whether its contribution to the overall GTV variability included a time trend over the treatment course. Trending eigenmodes were used to reconstruct the original semi-automatically delineated GTVs into a reduced model containing only time trends. Reduced models were compared to the original GTVs by analyzing reconstruction error in the GTV volume and position. Both retrospective (all weekly images) and prospective (only the first four weekly images) were evaluated. Average volume difference from the original GTV was 4.3% ± 2.4% for the trending model. The positional variability of the GTV over the treatment course, as measured by the standard deviation of the GTV centroid, was 1.9 ± 1.4 mm for the original GTVs, which was reduced to 1.2 ± 0.6 mm for the trending only model. In 3/13 cases the dominant eigenmode changed class between the prospective and retrospective models. The trending only model preserved GTV volume and shape relative to the original GTVs, while reducing spurious positional variability. The classification scheme appears feasible for separating types of geometric variability by time trend. PMID:22172998

  14. A quantitative geometric mechanics lens model: insights into the mechanisms of accommodation and presbyopia.

    PubMed

    Reilly, Matthew A

    2014-10-01

    This study expands on a geometric model of ocular accommodation (Reilly and Ravi, Vision Res. 50:330-336; 2010) by relaxing assumptions regarding lens symmetry about the equator. A method for predicting stretching force was derived. Two models were then developed: Model 1 held the equatorial geometry constant at all stages of accommodation, while Model 2 allowed localized deformation at the equator. Both models were compared to recent data for axial thickness, anterior and posterior radii of curvature, surface area, cross-sectional area, volume, and stretching force for the 29-year-old lens. Age-related changes in accommodation were also simulated. Model 1 gave predictions which agreed with the Helmholtz theory of accommodation, while Model 2's predictions agreed with the Schachar mechanism of accommodation. Trends predicted by Model 1 agreed with all available experimental data, while Model 2 disagreed with recent surface area measurements. Further analysis indicated that Model 1 was fundamentally more efficient in that it required less force per diopter change in optical power than Model 2. Model 1 more accurately predicted age-related changes in accommodation amplitude. This implies that the zero-force (fully accommodated) state geometry changes with age due to a shifting balance in residual stresses between the lens and capsule.

  15. Finite element modelling of squirrel, guinea pig and rat skulls: using geometric morphometrics to assess sensitivity

    PubMed Central

    Cox, P G; Fagan, M J; Rayfield, E J; Jeffery, N

    2011-01-01

    Rodents are defined by a uniquely specialized dentition and a highly complex arrangement of jaw-closing muscles. Finite element analysis (FEA) is an ideal technique to investigate the biomechanical implications of these specializations, but it is essential to understand fully the degree of influence of the different input parameters of the FE model to have confidence in the model's predictions. This study evaluates the sensitivity of FE models of rodent crania to elastic properties of the materials, loading direction, and the location and orientation of the models’ constraints. Three FE models were constructed of squirrel, guinea pig and rat skulls. Each was loaded to simulate biting on the incisors, and the first and the third molars, with the angle of the incisal bite varied over a range of 45°. The Young's moduli of the bone and teeth components were varied between limits defined by findings from our own and previously published tests of material properties. Geometric morphometrics (GMM) was used to analyse the resulting skull deformations. Bone stiffness was found to have the strongest influence on the results in all three rodents, followed by bite position, and then bite angle and muscle orientation. Tooth material properties were shown to have little effect on the deformation of the skull. The effect of bite position varied between species, with the mesiodistal position of the biting tooth being most important in squirrels and guinea pigs, whereas bilateral vs. unilateral biting had the greatest influence in rats. A GMM analysis of isolated incisor deformations showed that, for all rodents, bite angle is the most important parameter, followed by elastic properties of the tooth. The results here elucidate which input parameters are most important when defining the FE models, but also provide interesting glimpses of the biomechanical differences between the three skulls, which will be fully explored in future publications. PMID:21974720

  16. Modelling Polymer Deformation during 3D Printing

    NASA Astrophysics Data System (ADS)

    McIlroy, Claire; Olmsted, Peter

    Three-dimensional printing has the potential to transform manufacturing processes, yet improving the strength of printed parts, to equal that of traditionally-manufactured parts, remains an underlying issue. The fused deposition modelling technique involves melting a thermoplastic, followed by layer-by-layer extrusion to fabricate an object. The key to ensuring strength at the weld between layers is successful inter-diffusion. However, prior to welding, both the extrusion process and the cooling temperature profile can significantly deform the polymer micro-structure and, consequently, how well the polymers are able to ``re-entangle'' across the weld. In particular, polymer alignment in the flow can cause de-bonding of the layers and create defects. We have developed a simple model of the non-isothermal extrusion process to explore the effects that typical printing conditions and material rheology have on the conformation of a polymer melt. In particular, we incorporate both stretch and orientation using the Rolie-Poly constitutive equation to examine the melt structure as it flows through the nozzle, the subsequent alignment with the build plate and the resulting deformation due to the fixed nozzle height, which is typically less than the nozzle radius.

  17. Geometric algorithms for electromagnetic modeling of large scale structures

    NASA Astrophysics Data System (ADS)

    Pingenot, James

    With the rapid increase in the speed and complexity of integrated circuit designs, 3D full wave and time domain simulation of chip, package, and board systems becomes more and more important for the engineering of modern designs. Much effort has been applied to the problem of electromagnetic (EM) simulation of such systems in recent years. Major advances in boundary element EM simulations have led to O(n log n) simulations using iterative methods and advanced Fast. Fourier Transform (FFT), Multi-Level Fast Multi-pole Methods (MLFMM), and low-rank matrix compression techniques. These advances have been augmented with an explosion of multi-core and distributed computing technologies, however, realization of the full scale of these capabilities has been hindered by cumbersome and inefficient geometric processing. Anecdotal evidence from industry suggests that users may spend around 80% of turn-around time manipulating the geometric model and mesh. This dissertation addresses this problem by developing fast and efficient data structures and algorithms for 3D modeling of chips, packages, and boards. The methods proposed here harness the regular, layered 2D nature of the models (often referred to as "2.5D") to optimize these systems for large geometries. First, an architecture is developed for efficient storage and manipulation of 2.5D models. The architecture gives special attention to native representation of structures across various input models and special issues particular to 3D modeling. The 2.5D structure is then used to optimize the mesh systems First, circuit/EM co-simulation techniques are extended to provide electrical connectivity between objects. This concept is used to connect independently meshed layers, allowing simple and efficient 2D mesh algorithms to be used in creating a 3D mesh. Here, adaptive meshing is used to ensure that the mesh accurately models the physical unknowns (current and charge). Utilizing the regularized nature of 2.5D objects and

  18. Geometrical model for DBMS: an experimental DBMS using IBM solid modeling

    SciTech Connect

    Ali, D.E.D.L.

    1985-01-01

    This research presents a new model for data base management systems (DBMS). The new model, Geometrical DBMS, is based on using solid modelling technology in designing and implementing DBMS. The Geometrical DBMS is implemented using the IBM solid modelling Geometric Design Processor (GDP). Built basically on computer-graphics concepts, Geometrical DBMS is indeed a unique model. Traditionally, researchers start with one of the existent DBMS models and then put a graphical front end on it. In Geometrical DBMS, the graphical aspect of the model is not an alien concept tailored to the model but is, as a matter of fact, the atom around which the model is designed. The main idea in Geometrical DBMS is to allow the user and the system to refer to and manipulate data items as a solid object in 3D space, and representing a record as a group of logically related solid objects. In Geometical DBMS, hierarchical structure is used to present the data relations and the user sees the data as a group of arrays; yet, for the user and the system together, the data structure is a multidimensional tree.

  19. Methods for Geometric Data Validation of 3d City Models

    NASA Astrophysics Data System (ADS)

    Wagner, D.; Alam, N.; Wewetzer, M.; Pries, M.; Coors, V.

    2015-12-01

    Geometric quality of 3D city models is crucial for data analysis and simulation tasks, which are part of modern applications of the data (e.g. potential heating energy consumption of city quarters, solar potential, etc.). Geometric quality in these contexts is however a different concept as it is for 2D maps. In the latter case, aspects such as positional or temporal accuracy and correctness represent typical quality metrics of the data. They are defined in ISO 19157 and should be mentioned as part of the metadata. 3D data has a far wider range of aspects which influence their quality, plus the idea of quality itself is application dependent. Thus, concepts for definition of quality are needed, including methods to validate these definitions. Quality on this sense means internal validation and detection of inconsistent or wrong geometry according to a predefined set of rules. A useful starting point would be to have correct geometry in accordance with ISO 19107. A valid solid should consist of planar faces which touch their neighbours exclusively in defined corner points and edges. No gaps between them are allowed, and the whole feature must be 2-manifold. In this paper, we present methods to validate common geometric requirements for building geometry. Different checks based on several algorithms have been implemented to validate a set of rules derived from the solid definition mentioned above (e.g. water tightness of the solid or planarity of its polygons), as they were developed for the software tool CityDoctor. The method of each check is specified, with a special focus on the discussion of tolerance values where they are necessary. The checks include polygon level checks to validate the correctness of each polygon, i.e. closeness of the bounding linear ring and planarity. On the solid level, which is only validated if the polygons have passed validation, correct polygon orientation is checked, after self-intersections outside of defined corner points and edges

  20. A geometric model of anorexia and its treatment.

    PubMed

    Callahan, J

    1982-04-01

    Anorexia is a severe psychological disorder in which a person's dieting turns into compulsive fasting. Some victims develop, after a time, a bulimic phase; their fasting is interrupted at intervals by bouts of indiscriminate gorging. One successful treatment makes use of a naturally occurring trance state, in which the anorexic's obsession with food recedes temporarily, to offer reassurance and rebuild a personality free of the obsession. The proposed model is catastrophe-theoretic. It assumes (a) that the bifurcation of eating attitudes typical of anorexia can be modeled by a cusp whose controls are hunger and eating regimen; and (b) that the normal cycle of falling asleep and waking up can be modeled by a hysteresis loop controlled by alertness. Catastrophe theory predicts two additional controls, and a larger model organized by the E6 singularity. The new controls are identified with loss of self-control and insecurity, and anorexia is correlated with high insecurity. The model makes the following predictions. First, under moderate levels of self-control and eating regimen, an anorexic has access to balanced, nonobsessive attitudes toward food at a reduced level of wakefulness. This is the trance state. Second, a healthy individual has two distinct sleep modes, dominated by cerebral and somatic elements, respectively. Third, with increasing insecurity the distinct modes fuse together, so that an anorexic's sleep patterns are abnormal. The model is geometric because the connection between behavior and controlling factors is made by graphs of certain standard form. PMID:7092772

  1. Nonlinear geometrically adaptive finite element model of the coilbox

    SciTech Connect

    Troyani, N.

    1996-12-01

    Hot bar heat loss in the transfer table, the rolling stage between rougher stands and finishing stands in a hot mill, is of major concern for reasons for energy consumption, metallurgical uniformity, and rollability. A mathematical model, as well as the corresponding numerical solution, is presented for the evolution of temperature in a coiling and uncoiling bar in hot mills in the form of a parabolic partial differential equation for a shape-changing domain. The space discretization is achieved via a computationally efficient geometrically adaptive finite element scheme that accommodates the change in shape of the domain, using a computationally novel treatment of the resulting thermal contact problem due to coiling. Time is discretized according to a Crank-Nicolson scheme. Finally, some numerical results are presented.

  2. Rapid world modeling: Fitting range data to geometric primitives

    SciTech Connect

    Feddema, J.; Little, C.

    1996-12-31

    For the past seven years, Sandia National Laboratories has been active in the development of robotic systems to help remediate DOE`s waste sites and decommissioned facilities. Some of these facilities have high levels of radioactivity which prevent manual clean-up. Tele-operated and autonomous robotic systems have been envisioned as the only suitable means of removing the radioactive elements. World modeling is defined as the process of creating a numerical geometric model of a real world environment or workspace. This model is often used in robotics to plan robot motions which perform a task while avoiding obstacles. In many applications where the world model does not exist ahead of time, structured lighting, laser range finders, and even acoustical sensors have been used to create three dimensional maps of the environment. These maps consist of thousands of range points which are difficult to handle and interpret. This paper presents a least squares technique for fitting range data to planar and quadric surfaces, including cylinders and ellipsoids. Once fit to these primitive surfaces, the amount of data associated with a surface is greatly reduced up to three orders of magnitude, thus allowing for more rapid handling and analysis of world data.

  3. Aeroelastic simulation of multi-MW wind turbines using a free vortex model coupled to a geometrically exact beam model

    NASA Astrophysics Data System (ADS)

    Saverin, Joseph; Peukert, Juliane; Marten, David; Pechlivanoglou, George; Paschereit, Christian Oliver; Greenblatt, David

    2016-09-01

    The current paper investigates the aeroelastic modelling of large, flexible multi- MW wind turbine blades. Most current performance prediction tools make use of the Blade Element Momentum (BEM) model, based upon a number of simplifying assumptions that hold only under steady conditions. This is why a lifting line free vortex wake (LLFVW) algorithm is used here to accurately resolve unsteady wind turbine aerodynamics. A coupling to the structural analysis tool BeamDyn, based on geometrically exact beam theory, allows for time-resolved aeroelastic simulations with highly deflected blades including bend-twist, coupling. Predictions of blade loading and deformation for rigid and flexible blades are analysed with reference to different aerodynamic and structural approaches. The emergency shutdown procedure is chosen as an examplary design load case causing large deflections to place emphasis on the influence of structural coupling and demonstrate the necessity of high fidelity structural models.

  4. Dosimetric and geometric evaluation of the use of deformable image registration in adaptive intensity-modulated radiotherapy for head-and-neck cancer

    PubMed Central

    Eiland, R.B.; Maare, C.; Sjöström, D.; Samsøe, E.; Behrens, C.F.

    2014-01-01

    The aim of this study was to carry out geometric and dosimetric evaluation of the usefulness of a deformable image registration algorithm utilized for adaptive head-and-neck intensity-modulated radiotherapy. Data consisted of seven patients, each with a planning CT (pCT), a rescanning CT (ReCT) and a cone beam CT (CBCT). The CBCT was acquired on the same day (±1 d) as the ReCT (i.e. at Fraction 17, 18, 23, 24 or 29). The ReCT served as ground truth. A deformed CT (dCT) with structures was created by deforming the pCT to the CBCT. The geometrical comparison was based on the volumes of the deformed, and the manually delineated structures on the ReCT. Likewise, the center of mass shift (CMS) and the Dice similarity coefficient were determined. The dosimetric comparison was performed by recalculating the initial treatment plan on the dCT and the ReCT. Dose–volume histogram (DVH) points and a range of conformity measures were used for the evaluation. We found a significant difference in the median volume of the dCT relative to that of the ReCT. Median CMS values were ∼2–5 mm, except for the spinal cord, where the median CMS was 8 mm. Dosimetric evaluation of target structures revealed small differences, while larger differences were observed for organs at risk. The deformed structures cannot fully replace manually delineated structures. Based on both geometrical and dosimetrical measures, there is a tendency for the dCT to overestimate the need for replanning, compared with the ReCT. PMID:24907340

  5. Videogrammetric Model Deformation Measurement System User's Manual

    NASA Technical Reports Server (NTRS)

    Dismond, Harriett R.

    2002-01-01

    The purpose of this manual is to provide the user of the NASA VMD system, running the MDef software, Version 1.10, all information required to operate the system. The NASA Videogrammetric Model Deformation system consists of an automated videogrammetric technique used to measure the change in wing twist and bending under aerodynamic load in a wind tunnel. The basic instrumentation consists of a single CCD video camera and a frame grabber interfaced to a computer. The technique is based upon a single view photogrammetric determination of two-dimensional coordinates of wing targets with fixed (and known) third dimensional coordinate, namely the span-wise location. The major consideration in the development of the measurement system was that productivity must not be appreciably reduced.

  6. Nonlinear modeling and estimation of slew induced structural deformations

    NASA Technical Reports Server (NTRS)

    Dwyer, T. A. W., III; Karray, F.

    1988-01-01

    A model of the nonlinear dynamics of a deformable maneuvering multibody system is described, whereby elastic deformation are modeled by restoring forces and dissipative forces at point mass appendages. This model is brought into bilinear form. Estimation of deformations occasioned by rapid slewing maneuvers is carried out by a filter based on a globally equivalent linear model of the bilinear dynamics, and is shown to be an improvement over the extended Kalman filter. To further alleviate the computational burden, the estimated deformation state is propagated between observations by a low dimensional operator spline interpolator of bilinear system Volterra series, which is easily implemented.

  7. The Importance of Geometric Effects in Coronal Loop Models

    NASA Astrophysics Data System (ADS)

    Mikić, Zoran; Lionello, Roberto; Mok, Yung; Linker, Jon A.; Winebarger, Amy R.

    2013-08-01

    We systematically investigate the effects of geometrical assumptions in one-dimensional (1D) models of coronal loops. Many investigations of coronal loops have been based on restrictive assumptions, including symmetry in the loop shape and heating profile, and a uniform cross-sectional area. Starting with a solution for a symmetric uniform-area loop with uniform heating, we gradually relax these restrictive assumptions to consider the effects of nonuniform area, nonuniform heating, a nonsymmetric loop shape, and nonsymmetric heating, to show that the character of the solutions can change in important ways. We find that loops with nonuniform cross-sectional area are more likely to experience thermal nonequilibrium, and that they produce significantly enhanced coronal emission, compared with their uniform-area counterparts. We identify a process of incomplete condensation in loops experiencing thermal nonequilibrium during which the coronal parts of loops never fully cool to chromospheric temperatures. These solutions are characterized by persistent siphon flows. Their properties agree with observations (Lionello et al.) and may not suffer from the drawbacks that led Klimchuk et al. to conclude that thermal nonequilibrium is not consistent with observations. We show that our 1D results are qualitatively similar to those seen in a three-dimensional model of an active region. Our results suggest that thermal nonequilibrium may play an important role in the behavior of coronal loops, and that its dismissal by Klimchuk et al., whose model suffered from some of the restrictive assumptions we described, may have been premature.

  8. THE IMPORTANCE OF GEOMETRIC EFFECTS IN CORONAL LOOP MODELS

    SciTech Connect

    Mikic, Zoran; Lionello, Roberto; Linker, Jon A.; Mok, Yung; Winebarger, Amy R.

    2013-08-20

    We systematically investigate the effects of geometrical assumptions in one-dimensional (1D) models of coronal loops. Many investigations of coronal loops have been based on restrictive assumptions, including symmetry in the loop shape and heating profile, and a uniform cross-sectional area. Starting with a solution for a symmetric uniform-area loop with uniform heating, we gradually relax these restrictive assumptions to consider the effects of nonuniform area, nonuniform heating, a nonsymmetric loop shape, and nonsymmetric heating, to show that the character of the solutions can change in important ways. We find that loops with nonuniform cross-sectional area are more likely to experience thermal nonequilibrium, and that they produce significantly enhanced coronal emission, compared with their uniform-area counterparts. We identify a process of incomplete condensation in loops experiencing thermal nonequilibrium during which the coronal parts of loops never fully cool to chromospheric temperatures. These solutions are characterized by persistent siphon flows. Their properties agree with observations (Lionello et al.) and may not suffer from the drawbacks that led Klimchuk et al. to conclude that thermal nonequilibrium is not consistent with observations. We show that our 1D results are qualitatively similar to those seen in a three-dimensional model of an active region. Our results suggest that thermal nonequilibrium may play an important role in the behavior of coronal loops, and that its dismissal by Klimchuk et al., whose model suffered from some of the restrictive assumptions we described, may have been premature.

  9. Examining the geometrical model with inverted mass hierarchy for neutrinos

    SciTech Connect

    Honda, Mizue; Tanimoto, Morimitsu

    2007-05-01

    The comprehensive analyses are presented in the model with the inverted mass hierarchy for neutrinos, which follows from a geometrical structure of a (1+5) dimensional space-time where two extra dimensions are compactified on the T{sup 2}/Z{sub 3} orbifold. The model gives two large lepton flavor mixings due to the S{sub 3} structure in the (1+5) dimensional space-time. It also predicts the lightest neutrino mass as m{sub 3}=(1-50)x10{sup -5} eV and the effective neutrino mass responsible for neutrinoless double beta decays as {sub ee}{approx_equal}50 meV. The low energy CP violation, J{sub CP} could be 0.02. On the other hand, the observed baryon asymmetry in the present universe is produced by the nonthermal leptogenesis, which works even at the reheating temperature T{sub R}=10{sup 4}-10{sup 6} GeV. The correlation between the baryon asymmetry and the low energy CP violation is examined in this model.

  10. Geometrical model for malaria parasite migration in structured environments

    NASA Astrophysics Data System (ADS)

    Battista, Anna; Frischknecht, Friedrich; Schwarz, Ulrich S.

    2014-10-01

    Malaria is transmitted to vertebrates via a mosquito bite, during which rodlike and crescent-shaped parasites, called sporozoites, are injected into the skin of the host. Searching for a blood capillary to penetrate, sporozoites move quickly in locally helical trajectories, that are frequently perturbed by interactions with the extracellular environment. Here we present a theoretical analysis of the active motility of sporozoites in a structured environment. The sporozoite is modelled as a self-propelled rod with spontaneous curvature and bending rigidity. It interacts with hard obstacles through collision rules inferred from experimental observation of two-dimensional sporozoite movement in pillar arrays. Our model shows that complex motion patterns arise from the geometrical shape of the parasite and that its mechanical flexibility is crucial for stable migration patterns. Extending the model to three dimensions reveals that a bent and twisted rod can associate to cylindrical obstacles in a manner reminiscent of the association of sporozoites to blood capillaries, supporting the notion of a prominent role of cell shape during malaria transmission.

  11. Augmenting 3d City Model Components by Geodata Joins to Facilitate Ad-Hoc Geometric-Topologically Sound Integration

    NASA Astrophysics Data System (ADS)

    Kaden, R.; Kolbe, T. H.

    2012-07-01

    Virtual 3D city models are integrated complex compositions of spatial data of different themes, origin, quality, scale, and dimensions. Within this paper, we address the problem of spatial compatibility of geodata aiming to provide support for ad-hoc integration of virtual 3D city models including geodata of different sources and themes like buildings, terrain, and city furniture. In contrast to related work which is dealing with the integration of redundant geodata structured according to different data models and ontologies, we focus on the integration of complex 3D models of the same representation (here: CityGML) but regarding to the geometric-topological consistent matching of non-homologous objects, e.g. a building is connected to a road, and their geometric homogenisation. Therefore, we present an approach including a data model for a Geodata Join and the general concept of an integration procedure using the join information. The Geodata Join aims to bridge the lack of information between fragmented geodata by describing the relationship between adjacent objects from different datasets. The join information includes the geometrical representation of those parts of an object, which have a specific/known topological or geometrical relationship to another object. This part is referred to as a Connector and is either described by points, lines, or surfaces of the existing object geometry or by additional join geometry. In addition, the join information includes the specification of the connected object in the other dataset and the description of the topological and geometrical relationship between both objects, which is used to aid the matching process. Furthermore, the Geodata Join contains object-related information like accuracy values and restrictions of movement and deformation which are used to optimize the integration process. Based on these parameters, a functional model including a matching algorithm, transformation methods, and conditioned adjustment

  12. Towards the geometric optimization of potential field models - A new spatial operator tool and applications

    NASA Astrophysics Data System (ADS)

    Haase, Claudia; Götze, Hans-Jürgen

    2014-05-01

    We present a new method for automated geometric modifications of potential field models. Computational developments and the increasing amount of available potential field data, especially gradient data from the satellite missions, lead to increasingly complex models and integrated modelling tools. Editing of these models becomes more difficult. Our approach presents an optimization tool that is designed to modify vertex-based model geometries (e.g. polygons, polyhedrons, triangulated surfaces) by applying spatial operators to the model that use an adaptive, on-the-fly model discretization. These operators deform the existing model via vertex-dragging, aiming at a minimized misfit between measured and modelled potential field anomaly. The parameters that define the operators are subject to an optimization process. This kind of parametrization provides a means for the reduction of unknowns (dimensionality of the search space), allows a variety of possible modifications and ensures that geometries are not destroyed by crossing polygon lines or punctured planes. We implemented a particle swarm optimization as a global searcher with restart option for the task of finding optimal operator parameters. This approach provides us with an ensemble of model solutions that allows a selection and geologically reasonable interpretations. The applicability of the tool is demonstrated in two 2D case studies that provide models of different extent and with different objectives. The first model is a synthetic salt structure in a horizontally layered background model. Expected geometry modifications are considerably small and localized and the initial models contain rather little information on the intended salt structure. A large scale example is given in the second study. Here, the optimization is applied to a sedimentary basin model that is based on seismic interpretation. With the aim to evaluate the seismically derived model, large scale operators are applied that mainly cause

  13. The Effects of Nonlinear Damping on Post-flutter Behavior Using Geometrically Nonlinear Reduced Order Modeling

    NASA Astrophysics Data System (ADS)

    Song, Pengchao

    Recent studies of the occurrence of post-flutter limit cycle oscillations (LCO) of the F-16 have provided good support to the long-standing hypothesis that this phenomenon involves a nonlinear structural damping. A potential mechanism for the appearance of nonlinearity in the damping are the nonlinear geometric effects that arise when the deformations become large enough to exceed the linear regime. In this light, the focus of this investigation is first on extending nonlinear reduced order modeling (ROM) methods to include viscoelasticity which is introduced here through a linear Kelvin-Voigt model in the undeformed configuration. Proceeding with a Galerkin approach, the ROM governing equations of motion are obtained and are found to be of a generalized van der Pol-Duffing form with parameters depending on the structure and the chosen basis functions. An identification approach of the nonlinear damping parameters is next proposed which is applicable to structures modeled within commercial finite element software. The effects of this nonlinear damping mechanism on the post-flutter response is next analyzed on the Goland wing through time-marching of the aeroelastic equations comprising a rational fraction approximation of the linear aerodynamic forces. It is indeed found that the nonlinearity in the damping can stabilize the unstable aerodynamics and lead to finite amplitude limit cycle oscillations even when the stiffness related nonlinear geometric effects are neglected. The incorporation of these latter effects in the model is found to further decrease the amplitude of LCO even though the dominant bending motions do not seem to stiffen as the level of displacements is increased in static analyses.

  14. Free-form geometric modeling by integrating parametric and implicit PDEs.

    PubMed

    Du, Haixia; Qin, Hong

    2007-01-01

    Parametric PDE techniques, which use partial differential equations (PDEs) defined over a 2D or 3D parametric domain to model graphical objects and processes, can unify geometric attributes and functional constraints of the models. PDEs can also model implicit shapes defined by level sets of scalar intensity fields. In this paper, we present an approach that integrates parametric and implicit trivariate PDEs to define geometric solid models containing both geometric information and intensity distribution subject to flexible boundary conditions. The integrated formulation of second-order or fourth-order elliptic PDEs permits designers to manipulate PDE objects of complex geometry and/or arbitrary topology through direct sculpting and free-form modeling. We developed a PDE-based geometric modeling system for shape design and manipulation of PDE objects. The integration of implicit PDEs with parametric geometry offers more general and arbitrary shape blending and free-form modeling for objects with intensity attributes than pure geometric models.

  15. Single-View Food Portion Estimation Based on Geometric Models

    PubMed Central

    Fang, Shaobo; Liu, Chang; Zhu, Fengqing; Delp, Edward J.; Boushey, Carol J.

    2016-01-01

    In this paper we present a food portion estimation technique based on a single-view food image used for the estimation of the amount of energy (in kilocalories) consumed at a meal. Unlike previous methods we have developed, the new technique is capable of estimating food portion without manual tuning of parameters. Although single-view 3D scene reconstruction is in general an ill-posed problem, the use of geometric models such as the shape of a container can help to partially recover 3D parameters of food items in the scene. Based on the estimated 3D parameters of each food item and a reference object in the scene, the volume of each food item in the image can be determined. The weight of each food can then be estimated using the density of the food item. We were able to achieve an error of less than 6% for energy estimation of an image of a meal assuming accurate segmentation and food classification. PMID:27672682

  16. Propagation of finite amplitude sound through turbulence: modeling with geometrical acoustics and the parabolic approximation.

    PubMed

    Blanc-Benon, Philippe; Lipkens, Bart; Dallois, Laurent; Hamilton, Mark F; Blackstock, David T

    2002-01-01

    Sonic boom propagation can be affected by atmospheric turbulence. It has been shown that turbulence affects the perceived loudness of sonic booms, mainly by changing its peak pressure and rise time. The models reported here describe the nonlinear propagation of sound through turbulence. Turbulence is modeled as a set of individual realizations of a random temperature or velocity field. In the first model, linear geometrical acoustics is used to trace rays through each realization of the turbulent field. A nonlinear transport equation is then derived along each eigenray connecting the source and receiver. The transport equation is solved by a Pestorius algorithm. In the second model, the KZK equation is modified to account for the effect of a random temperature field and it is then solved numerically. Results from numerical experiments that simulate the propagation of spark-produced N waves through turbulence are presented. It is observed that turbulence decreases, on average, the peak pressure of the N waves and increases the rise time. Nonlinear distortion is less when turbulence is present than without it. The effects of random vector fields are stronger than those of random temperature fields. The location of the caustics and the deformation of the wave front are also presented. These observations confirm the results from the model experiment in which spark-produced N waves are used to simulate sonic boom propagation through a turbulent atmosphere. PMID:11837954

  17. dMODELS: A software package for modeling volcanic deformation

    NASA Astrophysics Data System (ADS)

    Battaglia, M.

    2013-12-01

    dMODELS is software package including the most common source models used to interpret deformation measurements near active volcanic centers. The emphasis is on estimating the parameters of analytical models of deformation by inverting data from the Global Positioning System (GPS), InSAR, tiltmeters and strainmeters. Source models include: (a) pressurized spherical, ellipsoidal and sill-like magma chambers in an elastic, homogeneous, flat half-space; and (b) pressurized spherical magma chamber with correction for the effect of topography (i.e., Williams and Wadge, 1998). All the expressions have been extended to include deformation and strain within the Earth's crust (as opposed to only the Earth's surface) and verified against finite element models. The software has been developed using Matlab but compiled versions that can be run using the free Matlab Compiler Runtime (MCR) are available for Linux, and Windows 7 (32bit and 64bit). The MATLAB scripts and compiled files are open source and intended for teaching and research. The software can be downloaded from the USGS web site pubs.usgs.gov/tm/13/b1/. Please e-mail the author at mbattaglia@usgs.gov if you would like to be included in the dMODELS mail list to get information about the release of software updates.

  18. Modeling bidirectional reflectance of forests and woodlands using Boolean models and geometric optics

    NASA Technical Reports Server (NTRS)

    Strahler, Alan H.; Jupp, David L. B.

    1990-01-01

    Geometric-optical discrete-element mathematical models for forest canopies have been developed using the Boolean logic and models of Serra. The geometric-optical approach is considered to be particularly well suited to describing the bidirectional reflectance of forest woodland canopies, where the concentration of leaf material within crowns and the resulting between-tree gaps make plane-parallel, radiative-transfer models inappropriate. The approach leads to invertible formulations, in which the spatial and directional variance provides the means for remote estimation of tree crown size, shape, and total cover from remotedly sensed imagery.

  19. A deformable model for hippocampus segmentation: Improvements and extension to 3D

    SciTech Connect

    Ghanei, A.; Soltanian-Zadeh, H. |; Windham, J.P.

    1996-12-31

    In this work, the application of a deformable model to the segmentation of hippocampus in brain MRI has been investigated. Common problems of the model in this case and similar cases have been discussed and solved. A new method for extracting discontinuous boundaries of an object with multiple unwanted edges has been developed. This method is based on detecting and following the edge by external forces. For improving the contour stability, its movement has been limited. Also, adaptive values for internal force weights have been used. In the next step, the model has been extended to 3D which is a Deformable Surface Model. A geometric structure used for this purpose. This helps in definition of normal vectors and internal forces. Finally, a method for generating the initial volume from individual initial polygons has been developed.

  20. Jordanian deformation of the open sℓ(2) Gaudin model

    NASA Astrophysics Data System (ADS)

    António, N. Cirilo; Manojlović, N.; Nagy, Z.

    2014-04-01

    We derive a deformed sℓ( 2) Gaudin model with integrable boundaries. Starting from the Jordanian deformation of the SL( 2)-invariant Yang R-matrix and generic solutions of the associated reflection equation and the dual reflection equation, we obtain the corresponding inhomogeneous spin- 1/2 XXX chain. The semiclassical expansion of the transfer matrix yields the deformed sℓ( 2) Gaudin Hamiltonians with boundary terms.

  1. Deformation modeling and constitutive modeling for anisotropic superalloys

    NASA Technical Reports Server (NTRS)

    Milligan, Walter W.; Antolovich, Stephen D.

    1989-01-01

    A study of deformation mechanisms in the single crystal superalloy PWA 1480 was conducted. Monotonic and cyclic tests were conducted from 20 to 1093 C. Both (001) and near-(123) crystals were tested, at strain rates of 0.5 and 50 percent/minute. The deformation behavior could be grouped into two temperature regimes: low temperatures, below 760 C; and high temperatures, above 820 to 950 C depending on the strain rate. At low temperatures, the mechanical behavior was very anisotropic. An orientation dependent CRSS, a tension-compression asymmetry, and anisotropic strain hardening were all observed. The material was deformed by planar octahedral slip. The anisotropic properties were correlated with the ease of cube cross-slip, as well as the number of active slip systems. At high temperatures, the material was isotropic, and deformed by homogeneous gamma by-pass. It was found that the temperature dependence of the formation of superlattice-intrinsic stacking faults was responsible for the local minimum in the CRSS of this alloy at 400 C. It was proposed that the cube cross-slip process must be reversible. This was used to explain the reversible tension-compression asymmetry, and was used to study models of cross-slip. As a result, the cross-slip model proposed by Paidar, Pope and Vitek was found to be consistent with the proposed slip reversibility. The results were related to anisotropic viscoplastic constitutive models. The model proposed by Walter and Jordan was found to be capable of modeling all aspects of the material anisotropy. Temperature and strain rate boundaries for the model were proposed, and guidelines for numerical experiments were proposed.

  2. Micromechanical Model for Deformation in Solids with Universal Predictions for Stress-Strain Curves and Slip Avalanches

    SciTech Connect

    Dahmen, Karin A.; Ben-Zion, Yehuda; Uhl, Jonathan T.

    2009-05-01

    A basic micromechanical model for deformation of solids with only one tuning parameter (weakening {epsilon}) is introduced. The model can reproduce observed stress-strain curves, acoustic emissions and related power spectra, event statistics, and geometrical properties of slip, with a continuous phase transition from brittle to ductile behavior. Exact universal predictions are extracted using mean field theory and renormalization group tools. The results agree with recent experimental observations and simulations of related models for dislocation dynamics, material damage, and earthquake statistics.

  3. Geometric modeling and analysis of large latticed surfaces

    NASA Technical Reports Server (NTRS)

    Nayfeh, A. H.; Hefzy, M. S.

    1980-01-01

    The application of geometrical schemes, similar to geodesic domes, to large spherical antenna reflectors was investigated. The shape and size of flat segmented latticed surfaces which approximate general shells of revolution, and in particular spherical and paraboloidal reflective surfaces, were determined. The extensive mathematical and computational geometric analyses of the reflector resulted in the development of a general purpose computer program capable of generating the complete design parameters of the dish. The program also includes a graphical self contained subroutine for graphic display of the required design.

  4. Preliminary deformation model for National Seismic Hazard map of Indonesia

    NASA Astrophysics Data System (ADS)

    Meilano, Irwan; Susilo, Gunawan, Endra; Sarsito, Dina; Prijatna, Kosasih; Abidin, Hasanuddin Z.; Efendi, Joni

    2015-04-01

    Preliminary deformation model for the Indonesia's National Seismic Hazard (NSH) map is constructed as the block rotation and strain accumulation function at the elastic half-space. Deformation due to rigid body motion is estimated by rotating six tectonic blocks in Indonesia. The interseismic deformation due to subduction is estimated by assuming coupling on subduction interface while deformation at active fault is calculated by assuming each of the fault`s segment slips beneath a locking depth or in combination with creeping in a shallower part. This research shows that rigid body motion dominates the deformation pattern with magnitude more than 15 mm/year, except in the narrow area near subduction zones and active faults where significant deformation reach to 25 mm/year.

  5. Preliminary deformation model for National Seismic Hazard map of Indonesia

    SciTech Connect

    Meilano, Irwan; Gunawan, Endra; Sarsito, Dina; Prijatna, Kosasih; Abidin, Hasanuddin Z.; Susilo,; Efendi, Joni

    2015-04-24

    Preliminary deformation model for the Indonesia’s National Seismic Hazard (NSH) map is constructed as the block rotation and strain accumulation function at the elastic half-space. Deformation due to rigid body motion is estimated by rotating six tectonic blocks in Indonesia. The interseismic deformation due to subduction is estimated by assuming coupling on subduction interface while deformation at active fault is calculated by assuming each of the fault‘s segment slips beneath a locking depth or in combination with creeping in a shallower part. This research shows that rigid body motion dominates the deformation pattern with magnitude more than 15 mm/year, except in the narrow area near subduction zones and active faults where significant deformation reach to 25 mm/year.

  6. A hybrid deformable model for real-time surgical simulation.

    PubMed

    Zhu, Bo; Gu, Lixu

    2012-07-01

    Modeling organ deformation in real remains a challenge in virtual minimally invasive (MIS) surgery simulation. In this paper, we propose a new hybrid deformable model to simulate deformable organs in the real-time surgical training system. Our hybrid model uses boundary element method (BEM) to compute global deformation based on a coarse surface mesh and uses a mass-spring model to simulate the dynamic behaviors of soft tissue interacting with surgical instruments. The simulation result is coupled with a high-resolution rendering mesh through a particle surface interpolation algorithm. Accurate visual and haptic feedbacks are provided in real time and temporal behaviors of biological soft tissues including viscosity and creeping are modeled as well. We prove our model to be suitable to work in complex virtual surgical environment by integrating it into a MIS training system. The hybrid model is evaluated with respect to efficiency, accuracy and robustness by a series of experiments. PMID:22483053

  7. Parameter estimation in deformable models using Markov chain Monte Carlo

    NASA Astrophysics Data System (ADS)

    Chalana, Vikram; Haynor, David R.; Sampson, Paul D.; Kim, Yongmin

    1997-04-01

    Deformable models have gained much popularity recently for many applications in medical imaging, such as image segmentation, image reconstruction, and image registration. Such models are very powerful because various kinds of information can be integrated together in an elegant statistical framework. Each such piece of information is typically associated with a user-defined parameter. The values of these parameters can have a significant effect on the results generated using these models. Despite the popularity of deformable models for various applications, not much attention has been paid to the estimation of these parameters. In this paper we describe systematic methods for the automatic estimation of these deformable model parameters. These methods are derived by posing the deformable models as a Bayesian inference problem. Our parameter estimation methods use Markov chain Monte Carlo methods for generating samples from highly complex probability distributions.

  8. Geometric models of folding at Loch Monar, Scotland, using computer simulation

    NASA Astrophysics Data System (ADS)

    Watkinson, A. J.; Thiessen, R. L.

    1988-06-01

    Small-scale hand specimens were collected at Loch Monar, Scotland, one of the classic areas of fold interference patterns. From the analysis of these, the geometries of the F 1 and F 2 folds were derived. By computer simulation, the complex three-dimensional form of the fold interference shapes can then be reproduced very closely. F 2 fold shapes and motion directions derived from the small-scale structures, along with those derived from field observations of F 1 lineations deformed about F 2 folds, were then applied to an extrapolated pre-F 2 shape of the Loch Monar synform. This generated a map pattern strikingly similar to that mapped by Ramsay (1958). The geometric models provide useful information for mechanical hypotheses of the folding observed at Loch Monar. The simulation reveals an interesting problem that whereas many small-scale interference patterns reflect the map pattern of the major structure, there are exposures of interference patterns that do not. These are dome and basin (type 1) patterns found in an area where a major F 2 fold hinge crosses an F 1 fold hinge zone. By examining the deformed L 1 lineation patterns found in this area, along with the computed D 2 strain orientations and the field observations of F 2 fold geometries, we suggest that those patterns formed due to local variations in the displacement directions during the F 2 folding, perhaps due to the mechanical influence of relatively competent pegmatite veins on the small-scale F 2 folds. The very high D 2 strain has then amplified the dome and basin elements to very elongate cone and cylinder forms. This creates local type 1 patterns within a regional type 2 interference pattern structure.

  9. Contact Modelling of Large Radius Air Bending with Geometrically Exact Contact Algorithm

    NASA Astrophysics Data System (ADS)

    Vorkov, V.; Konyukhov, A.; Vandepitte, D.; Duflou, J. R.

    2016-08-01

    Usage of high-strength steels in conventional air bending is restricted due to limited bendability of these metals. Large-radius punches provide a typical approach for decreasing deformations during the bending process. However, as deflection progresses the loading scheme changes gradually. Therefore, modelling of the contact interaction is essential for an accurate description of the loading scheme. In the current contribution, the authors implemented a plane frictional contact element based on the penalty method. The geometrically exact contact algorithm is used for the penetration determination. The implementation is done using the OOFEM - open source finite element solver. In order to verify the simulation results, experiments have been conducted on a bending press brake for 4 mm Weldox 1300 with a punch radius of 30 mm and a die opening of 80 mm. The maximum error for the springback calculation is 0.87° for the bending angle of 144°. The contact interaction is a crucial part of large radius bending simulation and the implementation leads to a reliable solution for the springback angle.

  10. Morpho-structural criteria for the identification of volcano deformation processes from analogue modeling

    NASA Astrophysics Data System (ADS)

    Rincon, Marta; Marquez, Alvaro; van Wyk de Vries, Benjamin; Herrera, Raquel; Granja Bruña, Jose Luis; Llanes, Pilar

    2014-05-01

    The morphology of volcanoes provides important information about edifice evolution. Volcanoes can deform by gravitational instability and intrusions. This deformation can compromise volcano structural stability, promoting flank collapse even at dormant edifices. Identification of past/active deformation processes is therefore important not only for the understanding of volcano evolution but also for volcanic hazards. Both deformation due to the flank spreading of a volcano over its weak core and due to the intrusion of a cryptodome in the volcano edifice can produce faulting and changes in the morphology of volcano flanks. These morpho-structural changes in the volcano open the possibility to identify potential deformed and unstable volcanoes using remote sensing techniques and DEMs. We have used analogue models of flank spreading and intrusion processes to make progress in the morpho-structural identification of deformation features which can provide criteria for distinguishing processes. We have geometrically and mechanically scaled two different sets of experiments using a sand-plaster mixture for volcano materials, silicone putty for weak core rocks and Golden Syrup for magma intrusions. For monitoring changes in the volcano morphology we have used a Kinect sensor (Microsoft), which provides us vertical displacements of volcano flanks several times per second with a 1 mm precision. We have synchronized the Kinect sensor with a digital camera for monitoring the spatio-temporal evolution of tectonic structures together with morphology. All experiments produce asymmetrical changes in volcano morphology, developing convex-concave geometries in the deformed flank. However, the spatial relationships of structures with changes in volcano flank curvature are different for the two processes, as noted by previous authors. The morphometric tools developed for analyzing volcano topography allow us to identify intrusion processes due to volcano volume increase. We have

  11. Inelastic deformation and phenomenological modeling of aluminum including transient effect

    SciTech Connect

    Cho, C.W.

    1980-01-01

    A review was made of several phenomenological theories which have recently been proposed to describe the inelastic deformation of crystalline solids. Hart's deformation theory has many advantages, but there are disagreements with experimental deformation at stress levels below yield. A new inelastic deformation theory was proposed, introducing the concept of microplasticity. The new model consists of five deformation elements: a friction element representing a deformation element controlled by dislocation glide, a nonrecoverable plastic element representing the dislocation leakage rate over the strong dislocation barriers, a microplastic element representing the dislocation leakage rate over the weak barriers, a short range anelastic spring element representing the recoverable anelastic strain stored by piled-up dislocations against the weak barriers, and a long range anelastic spring element representing the recoverable strain stored by piled-up dislocations against the strong barriers. Load relaxation and tensile testing in the plastic range were used to determine the material parameters for the plastic friction elements. The short range and long range anelastic moduli and the material parameters for the kinetics of microplasticity were determined by the measurement of anelastic loops and by performing load relaxation tests in the microplastic region. Experimental results were compared with a computer simulation of the transient deformation behavior of commercial purity aluminum. An attempt was made to correlate the material parameters and the microstructure from TEM. Stability of material parameters during inelastic deformation was discussed and effect of metallurgical variables was examined experimentally. 71 figures, 5 tables.

  12. Droplet Deformation Prediction With the Droplet Deformation and Breakup Model (DDB)

    NASA Technical Reports Server (NTRS)

    Vargas, Mario

    2012-01-01

    The Droplet Deformation and Breakup Model was used to predict deformation of droplets approaching the leading edge stagnation line of an airfoil. The quasi-steady model was solved for each position along the droplet path. A program was developed to solve the non-linear, second order, ordinary differential equation that governs the model. A fourth order Runge-Kutta method was used to solve the equation. Experimental slip velocities from droplet breakup studies were used as input to the model which required slip velocity along the particle path. The center of mass displacement predictions were compared to the experimental measurements from the droplet breakup studies for droplets with radii in the range of 200 to 700 mm approaching the airfoil at 50 and 90 m/sec. The model predictions were good for the displacement of the center of mass for small and medium sized droplets. For larger droplets the model predictions did not agree with the experimental results.

  13. Modelling continental deformation within global plate tectonic reconstructions

    NASA Astrophysics Data System (ADS)

    Williams, S.; Whittaker, J.; Heine, C.; Müller, P.

    2010-12-01

    A limitation of regional and global plate tectonic models is the way continental deformation is represented. Continental blocks are typically represented as rigid polygons - overlaps or gaps between adjacent continental blocks represent extension or compression respectively. Full-fit reconstructions of major ocean basins result in large overlaps between the conjugate continental plates, on the basis that the continental margins are highly extended compared to their pre-rift state. A fundamental challenge in generating more robust global-scale plate reconstructions is the incorporation of a more quantitative description of the kinematics within extended passive margins, based on observations. We have used the conjugate Southern Australia and Wilkes Land, Antarctica margins as a case study, and as part of this work have generated revised sediment thickness maps for these margins. These datasets are used to test different approaches for generating full-fit reconstructions in order to create a framework of methodologies that is globally applicable. One approach is to restore two conjugate continent-ocean boundaries (COBs) to their pre-rift configuration and then use the geometric fitting method of Hellinger (1981) and Royer and Chang (1991), used to generate fits of seafloor isochrons, to generate a “full-fit” Euler pole. To quantitatively restore the COBs to their palinspastic pre-rift configuration we integrate estimates of crustal thickness along small circle paths, defined by an initial estimate of the Euler stage pole describing plate motions during continental rifting. We then use the conjugate sets of restored COB’s as inputs to the geometric fitting method, treating them as isochrons, and so generate poles of rotation for the plate configuration prior to rifting. Two potential shortcomings of this methodology are that (1) the conjugate margins are treated independently, whereas in reality they were actually one continuous continental basin during rifting

  14. A geometric level set model for ultrasounds analysis

    SciTech Connect

    Sarti, A.; Malladi, R.

    1999-10-01

    We propose a partial differential equation (PDE) for filtering and segmentation of echocardiographic images based on a geometric-driven scheme. The method allows edge-preserving image smoothing and a semi-automatic segmentation of the heart chambers, that regularizes the shapes and improves edge fidelity especially in presence of distinct gaps in the edge map as is common in ultrasound imagery. A numerical scheme for solving the proposed PDE is borrowed from level set methods. Results on human in vivo acquired 2D, 2D+time,3D, 3D+time echocardiographic images are shown.

  15. Distortion of DNA cholesteric liquid crystal quenched at low temperature : geometrical analysis and models

    NASA Astrophysics Data System (ADS)

    Leforestier, A.; Livolant, F.

    1992-10-01

    Freeze-fracture electron microscopy allows an ultrastructural analysis of deformations of a DNA cholesteric liquid crystalline sample subjected to a compressive stress applied parallel to the layers, when quickly frozen by projection onto a copper block cooled down to about 10K. A geometrical model of these deformations is proposed. After a brief recall of the usual representation of the cholesteric structure as a succession of equidistant pseudoplanes, we show that these planes are distorted into sinusoidal surfaces whose wavelength is much smaller than the cholesteric pitch and its amplitude modulated with the average molecular orientation relative to the compressive force. The consequences of these deformations regarding double twist occurrence within the structure are analysed. When the DNA concentration in the cholesteric mesophase is low, a complex helicoidal structure is observed. A relationship between these two phenomena is considered and discussed. La microscopie électronique associée à la technique de cryofracture permet une analyse ultrastructurale des déformations de l'organisation cristalline liquide cholestérique d'un échantillon d'ADN en solution : lors de la congélation par projection contre un bloc de cuivre refroidi à environ 10K par de l'hélium liquide, l'échantillon est soumis à des forces de compression parallèles à la stratification cholostérique. Nous présentons une modélisation géométrique de ces déformations. Après un bref rappel de la représentation schématique de la structure cholestérique par une série de plans fictifs, nous montrons que ces plans sont alors transformés en surfaces sinusoïdales dont la période est très inférieure au pas cholostérique et l'amplitude modulée en fonction de l'orientation relative des molécules et de la force de compression. Les conséquences de telles déformations sur l'émergence de double twist dans la structure sont examinées. Pour les plus faibles valeurs de

  16. Deformable models with sparsity constraints for cardiac motion analysis.

    PubMed

    Yu, Yang; Zhang, Shaoting; Li, Kang; Metaxas, Dimitris; Axel, Leon

    2014-08-01

    Deformable models integrate bottom-up information derived from image appearance cues and top-down priori knowledge of the shape. They have been widely used with success in medical image analysis. One limitation of traditional deformable models is that the information extracted from the image data may contain gross errors, which adversely affect the deformation accuracy. To alleviate this issue, we introduce a new family of deformable models that are inspired from the compressed sensing, a technique for accurate signal reconstruction by harnessing some sparseness priors. In this paper, we employ sparsity constraints to handle the outliers or gross errors, and integrate them seamlessly with deformable models. The proposed new formulation is applied to the analysis of cardiac motion using tagged magnetic resonance imaging (tMRI), where the automated tagging line tracking results are very noisy due to the poor image quality. Our new deformable models track the heart motion robustly, and the resulting strains are consistent with those calculated from manual labels. PMID:24721617

  17. Creeping motion and deformation of liquid drops in flow through 2D model porous media

    SciTech Connect

    Fong, I. )

    1988-01-01

    The motion, deformation and breakup of immiscible drops suspended in low Reynolds number flow through cylinder arrays has been studied experimentally to assess the applicability of the 2D model as a prototype for 2-phase flow through porous media. Both Newtonian and non-Newtonian fluid systems are considered. The relationship between key flow and geometric parameters and the critical condition for breakup, the resulting drop site distribution and the drop mobility is investigated. It is observed that the headon impact of a drop with a cylinder is an effective precursor to severe drop deformation and even breakup. The sequence of flow leading to impact is also important in determining the effectiveness of impact to result in breakup. When many drops fragments are present, the interaction between nearby drops strongly influences the final disposition of the fragments. Fluid elasticity appears to enhance the elongation of drops to form strands, but also to stabilize the strand against breakup.

  18. Modeling crustal deformation near active faults and volcanic centers: a catalog of deformation models and modeling approaches

    USGS Publications Warehouse

    Battaglia, Maurizio; ,; Peter, F.; Murray, Jessica R.

    2013-01-01

    This manual provides the physical and mathematical concepts for selected models used to interpret deformation measurements near active faults and volcanic centers. The emphasis is on analytical models of deformation that can be compared with data from the Global Positioning System (GPS) receivers, Interferometric synthetic aperture radar (InSAR), leveling surveys, tiltmeters and strainmeters. Source models include pressurized spherical, ellipsoidal, and horizontal penny-shaped geometries in an elastic, homogeneous, flat half-space. Vertical dikes and faults are described following the mathematical notation for rectangular dislocations in an elastic, homogeneous, flat half-space. All the analytical expressions were verified against numerical models developed by use of COMSOL Multyphics, a Finite Element Analysis software (http://www.comsol.com). In this way, typographical errors present were identified and corrected. Matlab scripts are also provided to facilitate the application of these models.

  19. Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles.

    PubMed

    Kononova, Olga; Snijder, Joost; Kholodov, Yaroslav; Marx, Kenneth A; Wuite, Gijs J L; Roos, Wouter H; Barsegov, Valeri

    2016-01-01

    The mechanical properties of virus capsids correlate with local conformational dynamics in the capsid structure. They also reflect the required stability needed to withstand high internal pressures generated upon genome loading and contribute to the success of important events in viral infectivity, such as capsid maturation, genome uncoating and receptor binding. The mechanical properties of biological nanoparticles are often determined from monitoring their dynamic deformations in Atomic Force Microscopy nanoindentation experiments; but a comprehensive theory describing the full range of observed deformation behaviors has not previously been described. We present a new theory for modeling dynamic deformations of biological nanoparticles, which considers the non-linear Hertzian deformation, resulting from an indenter-particle physical contact, and the bending of curved elements (beams) modeling the particle structure. The beams' deformation beyond the critical point triggers a dynamic transition of the particle to the collapsed state. This extreme event is accompanied by a catastrophic force drop as observed in the experimental or simulated force (F)-deformation (X) spectra. The theory interprets fine features of the spectra, including the nonlinear components of the FX-curves, in terms of the Young's moduli for Hertzian and bending deformations, and the structural damage dependent beams' survival probability, in terms of the maximum strength and the cooperativity parameter. The theory is exemplified by successfully describing the deformation dynamics of natural nanoparticles through comparing theoretical curves with experimental force-deformation spectra for several virus particles. This approach provides a comprehensive description of the dynamic structural transitions in biological and artificial nanoparticles, which is essential for their optimal use in nanotechnology and nanomedicine applications. PMID:26821264

  20. Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles.

    PubMed

    Kononova, Olga; Snijder, Joost; Kholodov, Yaroslav; Marx, Kenneth A; Wuite, Gijs J L; Roos, Wouter H; Barsegov, Valeri

    2016-01-01

    The mechanical properties of virus capsids correlate with local conformational dynamics in the capsid structure. They also reflect the required stability needed to withstand high internal pressures generated upon genome loading and contribute to the success of important events in viral infectivity, such as capsid maturation, genome uncoating and receptor binding. The mechanical properties of biological nanoparticles are often determined from monitoring their dynamic deformations in Atomic Force Microscopy nanoindentation experiments; but a comprehensive theory describing the full range of observed deformation behaviors has not previously been described. We present a new theory for modeling dynamic deformations of biological nanoparticles, which considers the non-linear Hertzian deformation, resulting from an indenter-particle physical contact, and the bending of curved elements (beams) modeling the particle structure. The beams' deformation beyond the critical point triggers a dynamic transition of the particle to the collapsed state. This extreme event is accompanied by a catastrophic force drop as observed in the experimental or simulated force (F)-deformation (X) spectra. The theory interprets fine features of the spectra, including the nonlinear components of the FX-curves, in terms of the Young's moduli for Hertzian and bending deformations, and the structural damage dependent beams' survival probability, in terms of the maximum strength and the cooperativity parameter. The theory is exemplified by successfully describing the deformation dynamics of natural nanoparticles through comparing theoretical curves with experimental force-deformation spectra for several virus particles. This approach provides a comprehensive description of the dynamic structural transitions in biological and artificial nanoparticles, which is essential for their optimal use in nanotechnology and nanomedicine applications.

  1. Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles

    PubMed Central

    Kononova, Olga; Snijder, Joost; Kholodov, Yaroslav; Marx, Kenneth A.; Wuite, Gijs J. L.; Roos, Wouter H.; Barsegov, Valeri

    2016-01-01

    The mechanical properties of virus capsids correlate with local conformational dynamics in the capsid structure. They also reflect the required stability needed to withstand high internal pressures generated upon genome loading and contribute to the success of important events in viral infectivity, such as capsid maturation, genome uncoating and receptor binding. The mechanical properties of biological nanoparticles are often determined from monitoring their dynamic deformations in Atomic Force Microscopy nanoindentation experiments; but a comprehensive theory describing the full range of observed deformation behaviors has not previously been described. We present a new theory for modeling dynamic deformations of biological nanoparticles, which considers the non-linear Hertzian deformation, resulting from an indenter-particle physical contact, and the bending of curved elements (beams) modeling the particle structure. The beams’ deformation beyond the critical point triggers a dynamic transition of the particle to the collapsed state. This extreme event is accompanied by a catastrophic force drop as observed in the experimental or simulated force (F)-deformation (X) spectra. The theory interprets fine features of the spectra, including the nonlinear components of the FX-curves, in terms of the Young’s moduli for Hertzian and bending deformations, and the structural damage dependent beams’ survival probability, in terms of the maximum strength and the cooperativity parameter. The theory is exemplified by successfully describing the deformation dynamics of natural nanoparticles through comparing theoretical curves with experimental force-deformation spectra for several virus particles. This approach provides a comprehensive description of the dynamic structural transitions in biological and artificial nanoparticles, which is essential for their optimal use in nanotechnology and nanomedicine applications. PMID:26821264

  2. Effect of Shear Deformation and Continuity on Delamination Modelling with Plate Elements

    NASA Technical Reports Server (NTRS)

    Glaessgen, E. H.; Riddell, W. T.; Raju, I. S.

    1998-01-01

    The effects of several critical assumptions and parameters on the computation of strain energy release rates for delamination and debond configurations modeled with plate elements have been quantified. The method of calculation is based on the virtual crack closure technique (VCCT), and models that model the upper and lower surface of the delamination or debond with two-dimensional (2D) plate elements rather than three-dimensional (3D) solid elements. The major advantages of the plate element modeling technique are a smaller model size and simpler geometric modeling. Specific issues that are discussed include: constraint of translational degrees of freedom, rotational degrees of freedom or both in the neighborhood of the crack tip; element order and assumed shear deformation; and continuity of material properties and section stiffness in the vicinity of the debond front, Where appropriate, the plate element analyses are compared with corresponding two-dimensional plane strain analyses.

  3. Performance Analysis of Tandem-L Mission for Modeling Volcanic and Seismic Deformation Sources

    NASA Astrophysics Data System (ADS)

    Ansari, Homa; Goel, Kanika; Parizzi, Alessandro; Sudhaus, Henriette; Adam, Nico; Eineder, Michael

    2015-04-01

    Although a great number of publications have focused on the application of InSAR in deformation source modeling as well as the development of different algorithms in this regard, little investigation has been dedicated to the sensitivity analysis of the InSAR in deformation source modeling. Our purpose is to address this issue by analyzing the reliability of InSAR in modeling the deformation sources due to landslides, seismic and volcanic activities, with special focus on the L band SAR measurements. The sensitivity analysis is considered for three commonly used geophysical models in case of subsidence, seismic and volcanic activities; namely, the Gaussian subsidence bowl, Okada and Mogi point source, respectively. In each of the cases, the InSAR sensitivity is analytically formulated and its performance is investigated using simulated SAR data. The investigations are carried out using stochastic error propagation approaches to infer the precision of the models' parameters as well as their mutual covariance. The limiting factors in SAR interferometry are categorized in two groups and investigated separately in sensitivity analysis; with the first dealing with the geometrical limits imposed by the side looking geometry of the SAR measurements and the second focusing on the InSAR stochastic characteristics in the L band.

  4. Distinct element modeling of deformation bands in sandstone

    NASA Astrophysics Data System (ADS)

    Antonellini, Marco A.; Pollard, David D.

    1995-08-01

    We have conducted numerical experiments with the distinct element method to study factors that control the development of deformation bands in sandstone. These experiments show how sorting and initial porosity of the host rock control the development and the mode of deformation in the area of strain localization. The results of the numerical experiments are in qualitative agreement with field and microstructural observations of deformation bands at Arches National Park (Utah). In our numerical experiments sand grains are modeled as cylindrical elements that move in response to externally applied boundary conditions. Systems of elements that have a large variability in radius and/or loose packing deform at lower applied stresses than systems of elements that have a uniform radius and/or tight packing. The mode of deformation in the first kind of aggregate is particulate flow, where elements of different sizes move easily with respect to each other due to a low degree of interlocking. The mode of deformation in the second kind of aggregates is localized failure on small deformation bands. Shear bands in our numerical experiments nucleate as a zone of dilatancy and propagate via organization of dilatant zones into discrete faults. The presence of a flaw in the form of a 'weak' grain promotes the nucleation and propagation of shear bands.

  5. Collaborative multi organ segmentation by integrating deformable and graphical models.

    PubMed

    Uzunbaş, Mustafa Gökhan; Chen, Chao; Zhang, Shaoting; Poh, Kilian M; Li, Kang; Metaxas, Dimitris

    2013-01-01

    Organ segmentation is a challenging problem on which significant progress has been made. Deformable models (DM) and graphical models (GM) are two important categories of optimization based image segmentation methods. Efforts have been made on integrating two types of models into one framework. However, previous methods are not designed for segmenting multiple organs simultaneously and accurately. In this paper, we propose a hybrid multi organ segmentation approach by integrating DM and GM in a coupled optimization framework. Specifically, we show that region-based deformable models can be integrated with Markov Random Fields (MRF), such that multiple models' evolutions are driven by a maximum a posteriori (MAP) inference. It brings global and local deformation constraints into a unified framework for simultaneous segmentation of multiple objects in an image. We validate this proposed method on two challenging problems of multi organ segmentation, and the results are promising. PMID:24579136

  6. Modeling hemodynamic forces in carotid artery based on local geometric features.

    PubMed

    Chen, Yimin; Canton, Gador; Kerwin, William S; Chiu, Bernard

    2016-09-01

    Hemodynamic wall shear stress (WSS) plays an important role in the initiation and progression of carotid atherosclerosis. This study aims at developing a technique to model WSS distribution based on point-wise geometric features that can be efficiently computed. Computational fluid dynamic analysis was performed for ten subjects. Surface curvatures, vascular radius, rate of change of radius along the longitudinal direction and standardized longitudinal/circumferential coordinates were computed on a point-wise basis for the arteries. Each of these point-wise geometric parameters was transformed to maximize the adjusted correlation coefficient. The transformed geometric parameters subsequently served as input variables of a multiple regression model. Multiple regression analysis revealed a significant relationship ([Formula: see text]) between WSS and three geometric parameters in internal and external carotid arteries (ICA and ECA). These three geometric parameters include vascular radius (ICA: [Formula: see text], ECA: [Formula: see text]), standardized longitudinal/circumference coordinates (ICA: [Formula: see text], ECA: [Formula: see text]) and Gaussian curvature (ICA: [Formula: see text], ECA: [Formula: see text]). The results suggest that the proposed geometric parameters can serve as risk indicator in large-scale clinical studies aiming at elucidating the roles of local geometric risk of atherosclerosis. PMID:26578532

  7. SU-C-BRF-05: Design and Geometric Validation of An Externally and Internally Deformable, Programmable Lung Motion Phantom

    SciTech Connect

    Cheung, Y; Sawant, A

    2014-06-15

    Purpose: Most clinically-deployed strategies for respiratory motion management in lung radiotherapy (e.g., gating, tracking) use external markers that serve as surrogates for tumor motion. However, typical lung phantoms used to validate these strategies are rigid-exterior+rigid-interior or rigid-exterior+deformable-interior. Neither class adequately represents the human anatomy, which is deformable internally as well as externally. We describe the construction and experimental validation of a more realistic, externally- and internally-deformable, programmable lung phantom. Methods: The outer shell of a commercially-available lung phantom (RS- 1500, RSD Inc.) was used. The shell consists of a chest cavity with a flexible anterior surface, and embedded vertebrae, rib-cage and sternum. A 3-axis platform was programmed with sinusoidal and six patient-recorded lung tumor trajectories. The platform was used to drive a rigid foam ‘diaphragm’ that compressed/decompressed the phantom interior. Experimental characterization comprised of mapping the superior-inferior (SI) and anterior-posterior (AP) trajectories of external and internal radioopaque markers with kV x-ray fluoroscopy and correlating these with optical surface monitoring using the in-room VisionRT system. Results: The phantom correctly reproduced the programmed motion as well as realistic effects such as hysteresis. The reproducibility of marker trajectories over multiple runs for sinusoidal as well as patient traces, as characterized by fluoroscopy, was within 0.4 mm RMS error for internal as well as external markers. The motion trajectories of internal and external markers as measured by fluoroscopy were found to be highly correlated (R=0.97). Furthermore, motion trajectories of arbitrary points on the deforming phantom surface, as recorded by the VisionRT system also showed a high correlation with respect to the fluoroscopically-measured trajectories of internal markers (R=0.92). Conclusion: We have

  8. Modeling Anisotropic Plasticity: 3D Eulerian Hydrocode Simulations of High Strain Rate Deformation Processes

    NASA Astrophysics Data System (ADS)

    Burkett, Michael; Clancy, Sean; Maudlin, Paul; Holian, Kathleen

    2001-06-01

    : Previously developed constitutive models and solution algorithms for anisotropic elastoplastic material strength has been implemented in the three-dimensional CONEJO hydrodynamics code. CONEJO is an explicit, Eulerian continuum mechanics code that is utilized to predict formation processes associated with material deformation at elevated strain-rates and is a code development project under the Accelerated Strategic Computing Initiative (ASCI) program. Some special features of CONEJO include a high-order advection algorithm, a material interface tracking scheme, and van Leer monotonic advection-limiting. The anisotropic constitutive modeling is posed in an unrotated material frame using the theorem of polar decomposition to describe rigid body rotation. An Euler-Rodrigues description is used to quantify the rigid body rotations. Continuous quadratic yield functions fitted from polycrystal simulations for a metallic hexagonal-close-packed structure were utilized. Associative flow formulations incorporating these yield functions were solved using a geometric normal return method. Simple rectangular shear problems, "R-value" problems, and Taylor cylinder impact test data were utilized to verify and validate the implementation of the anisotropic model. A "stretching rod" problem (involving large strain and strain-rate deformation) was selected to investigate the effects of material anisotropy for this deformation process. The rod necking rate and topology was compared for CONEJO simulations using several isotropic and anisotropic descriptions that utilized the Mechanical Threshold Stress (MTS) model.

  9. Sparse deformable models with application to cardiac motion analysis.

    PubMed

    Yu, Yang; Zhang, Shaoting; Huang, Junzhou; Metaxas, Dimitris; Axel, Leon

    2013-01-01

    Deformable models have been widely used with success in medical image analysis. They combine bottom-up information derived from image appearance cues, with top-down shape-based constraints within a physics-based formulation. However, in many real world problems the observations extracted from the image data often contain gross errors, which adversely affect the deformation accuracy. To alleviate this issue, we introduce a new family of deformable models that are inspired from compressed sensing, a technique for efficiently reconstructing a signal based on its sparseness in some domain. In this problem, we employ sparsity to represent the outliers or gross errors, and combine it seamlessly with deformable models. The proposed new formulation is applied to the analysis of cardiac motion, using tagged magnetic resonance imaging (tMRI), where the automated tagging line tracking results are very noisy due to the poor image quality. Our new deformable models track the heart motion robustly, and the resulting strains are consistent with those calculated from manual labels. PMID:24683970

  10. Quantitative coronary angiography with deformable spline models.

    PubMed

    Klein, A K; Lee, F; Amini, A A

    1997-10-01

    Although current edge-following schemes can be very efficient in determining coronary boundaries, they may fail when the feature to be followed is disconnected (and the scheme is unable to bridge the discontinuity) or branch points exist where the best path to follow is indeterminate. In this paper, we present new deformable spline algorithms for determining vessel boundaries, and enhancing their centerline features. A bank of even and odd S-Gabor filter pairs of different orientations are convolved with vascular images in order to create an external snake energy field. Each filter pair will give maximum response to the segment of vessel having the same orientation as the filters. The resulting responses across filters of different orientations are combined to create an external energy field for snake optimization. Vessels are represented by B-Spline snakes, and are optimized on filter outputs with dynamic programming. The points of minimal constriction and the percent-diameter stenosis are determined from a computed vessel centerline. The system has been statistically validated using fixed stenosis and flexible-tube phantoms. It has also been validated on 20 coronary lesions with two independent operators, and has been tested for interoperator and intraoperator variability and reproducibility. The system has been found to be specially robust in complex images involving vessel branchings and incomplete contrast filling.

  11. Modeling AFM Induced Mechanical Deformation of Living Cells

    SciTech Connect

    Rudd, R E; McElfresh, M; Balhorn, R; Allen, M J; Belak, J

    2002-11-15

    Finite element modeling has been applied to study deformation of living cells in Atomic Force Microscopy (AFM) and particularly Recognition Force Microscopy (RFM). The abstract mechanical problem of interest is the response to RFM point loads of an incompressible medium enclosed in a fluid membrane. Cells are soft systems, susceptible to large deformations in the course of an RFM measurement. Often the local properties such as receptor anchoring forces, the reason for the measurement, are obscured by the response of the cell as a whole. Modeling can deconvolute these effects. This facilitates experimental efforts to have reproducible measurements of mechanical and chemical properties at specific kinds of receptor sites on the membrane of a living cell. In this article we briefly review the RFM technique for cells and the problems it poses, and then report on recent progress in modeling the deformation of cells by a point load.

  12. Role of anelastic rheology in volcanic deformation modelling

    NASA Astrophysics Data System (ADS)

    Trasatti, E.; Giunchi, C.; Bonafede, M.

    2003-04-01

    Analogical models of ground deformation in volcanic areas often show better agreement with observations than mathematical models assuming a perfectly elastic behaviour of the medium. In particular, extensive sand-box experiments show that, following an inflation episode at depth, strain localization takes place above the source, along fault-like structures, which play a fundamental role in governing the cumulative long term deformation of the medium. Owing to the low lithostatic pressure, to the widespread presence of fluids and to the low cohesion of volcanic material, shallow layers in a volcanic region are better described in terms of the modified Mohr-Coulomb constitutive relation. Deep layers, on the other side, are better described in terms of viscoelastic constitutive relations, owing to the high temperatures close to magma reservoirs. Taking into account the inelastic properties of the medium, it is possible to lower considerably the overpressure estimates inferred from elastic models and to reconcile inferred overpressure values with petrologic constraints. In this study, we develop finite element models of ground deformation in volcanic areas, employing elastic and inelastic constitutive laws. The aim of the analysis is to elucidate how a heterogeneous structure of the medium (variations in rheologic parameters and pore pressure) affect the stress and strain distribution. The huge ground deformation (more than 1.5 m) observed at Campi Flegrei caldera (Italy) during 1982-84 is modelled in terms of an inelastic behaviour of the medium. The caldera is characterized by different mechanical (elastic and inelastic) properties with respect to the host rocks, due to the different formation and evolution. Axi-symmetric finite element models are developed, involving an overpressure source located at depth greater than the deepest limit of hypocenter distribution. Models take into account gravity and the initial isotropic (lithostatic) stress state is perturbed by

  13. Modeling of Intellite 3 Layer Deformable Mirror

    SciTech Connect

    Papavasiliou, A

    2002-04-15

    This is a report on modeling of the Intellite three layer membrane mirror design. The goal of this project was to provide Intellite with a model that will allow them to design a mirror with confidence.

  14. Interpretation of postseismic deformation with a viscoelastic relaxation model

    NASA Technical Reports Server (NTRS)

    Wahr, J.; Wyss, M.

    1980-01-01

    A viscoelastic relaxation model is used to interpret postseismic surface deformation for the large-magnitude Aleutian earthquakes of 1957 and 1965. The lithosphere and asthenosphere are modeled as elastic solids with an anomalous viscoelastic inclusion below the island arc volcanoes. It is found that the observed postseismic surface deformation is a corollary of the known island arc structure. A satisfactory fit to the uplift following the 1957 earthquake is found for a viscoelastic volume with 80-km width extending from a depth of 50 to 200 km.

  15. Fluid-structure interaction modeling of clusters of spacecraft parachutes with modified geometric porosity

    NASA Astrophysics Data System (ADS)

    Takizawa, Kenji; Tezduyar, Tayfun E.; Boben, Joseph; Kostov, Nikolay; Boswell, Cody; Buscher, Austin

    2013-12-01

    To increase aerodynamic performance, the geometric porosity of a ringsail spacecraft parachute canopy is sometimes increased, beyond the "rings" and "sails" with hundreds of "ring gaps" and "sail slits." This creates extra computational challenges for fluid-structure interaction (FSI) modeling of clusters of such parachutes, beyond those created by the lightness of the canopy structure, geometric complexities of hundreds of gaps and slits, and the contact between the parachutes of the cluster. In FSI computation of parachutes with such "modified geometric porosity," the flow through the "windows" created by the removal of the panels and the wider gaps created by the removal of the sails cannot be accurately modeled with the Homogenized Modeling of Geometric Porosity (HMGP), which was introduced to deal with the hundreds of gaps and slits. The flow needs to be actually resolved. All these computational challenges need to be addressed simultaneously in FSI modeling of clusters of spacecraft parachutes with modified geometric porosity. The core numerical technology is the Stabilized Space-Time FSI (SSTFSI) technique, and the contact between the parachutes is handled with the Surface-Edge-Node Contact Tracking (SENCT) technique. In the computations reported here, in addition to the SSTFSI and SENCT techniques and HMGP, we use the special techniques we have developed for removing the numerical spinning component of the parachute motion and for restoring the mesh integrity without a remesh. We present results for 2- and 3-parachute clusters with two different payload models.

  16. Experimental characterization and crystal plasticity modeling of heterogeneous deformation in polycrystalline -Ti

    SciTech Connect

    Wang, Leyun; Barabash, Rozaliya; Yang, Y; Bieler, Prof T R; Crimp, Prof M A; Eisenlohr, P; Liu, W.; Ice, Gene E

    2011-01-01

    Grain-level heterogeneous deformation was studied in a polycrystalline {alpha}-Ti specimen deformed by four-point bending. Dislocation slip activity in the microstructure was investigated by surface slip trace analysis. Three-dimensional-X-ray diffraction (3D-XRD) was used to investigate subsurface lattice rotations and to identify geometrically necessary dislocations (GNDs). The slip systems of local GNDs were analyzed by studying the streaking directions of reflections in corresponding Laue patterns. The analysis performed in one grain indicated that the subsurface GNDs were from the same slip system identified using slip trace analysis in backscattered electron images. A crystal plasticity finite element (CPFE) model was used to simulate deformation of the same microstructural region. The predictions of dislocation slip activity match the general aspects of the experimental observations, including the ability to simulate the activation of different slip systems in grains where multiple slip systems were activated. Prediction of local crystal rotations, however, was the least accurate aspect of the CPFE model.

  17. Experimental characterization and crystal plasticity modeling of heterogeneous deformation in polycrystalline {alpha}-Ti.

    SciTech Connect

    Wang, L.; Barabash, R. I.; Yang, Y.; Bieler, T. R.; Crimp, M. A.; Eisenlohr, P.; Liu, W.; Ice, G. E.

    2011-03-01

    Grain-level heterogeneous deformation was studied in a polycrystalline {alpha}-Ti specimen deformed by four-point bending. Dislocation slip activity in the microstructure was investigated by surface slip trace analysis. Three-dimensional-X-ray diffraction (3D-XRD) was used to investigate subsurface lattice rotations and to identify geometrically necessary dislocations (GNDs). The slip systems of local GNDs were analyzed by studying the streaking directions of reflections in corresponding Laue patterns. The analysis performed in one grain indicated that the subsurface GNDs were from the same slip system identified using slip trace analysis in backscattered electron images. A crystal plasticity finite element (CPFE) model was used to simulate deformation of the same microstructural region. The predictions of dislocation slip activity match the general aspects of the experimental observations, including the ability to simulate the activation of different slip systems in grains where multiple slip systems were activated. Prediction of local crystal rotations, however, was the least accurate aspect of the CPFE model.

  18. Matrix model description of baryonic deformations

    SciTech Connect

    Bena, Iosif; Murayama, Hitoshi; Roiban, Radu; Tatar, Radu

    2003-03-13

    We investigate supersymmetric QCD with N{sub c} + 1 flavors using an extension of the recently proposed relation between gauge theories and matrix models.The impressive agreement between the two sides provides a beautiful confirmation of the extension of the gauge theory-matrix model relation to this case.

  19. Numerical analysis of road pavement thermal deformability, based on Biot viscoelastic model of porous medium

    NASA Astrophysics Data System (ADS)

    Bartlewska-Urban, Monika; Zombroń, Marek; Strzelecki, Tomasz

    2016-03-01

    The following study presents numerical calculations for establishing the impact of temperature changes on the process of distortion of bi-phase medium represented using Biot consolidation equations with Kelvin-Voigt rheological skeleton presented, on the example of thermo-consolidation of a pavement of expressway S17. We analyzed the behavior of the expressway under the action of its own weight, dynamic load caused by traffic and temperature gradient. This paper presents the application of the Biot consolidation model with the Kelvin-Voigt skeleton rheological characteristics and the influence of temperature on the deformation process is taken into account. A three-dimensional model of the medium was created describing the thermal consolidation of a porous medium. The 3D geometrical model of the area under investigation was based on data obtained from the land surveying and soil investigation of a 200 m long section of the expressway and its shoulders.

  20. Methods for Geometric Modeling of Electronic Inspection Data

    SciTech Connect

    Taylor, J.R.

    1999-06-28

    The Oak Ridge Y-12 plant has implemented a methodology for characterizing parts and assemblies based on their as-measured condition. Complete solid models of each part in an assembly are created to represent these measurements. The models produced can be analyzed for mass properties, relative shape variations, interference checking, and optimal mating between components. This report describes the methodology used to take a relatively sparse set of measured inspection points and generate a representative fully analytical solid model.

  1. Modeling deformation behavior of the baseball.

    PubMed

    Nicholls, Rochelle Llewelyn; Miller, Karol; Elliott, Bruce C

    2005-02-01

    Regulating ball response to impact is one way to control ball exit velocity in baseball. This is necessary to reduce injuries to defensive players and maintain the balance between offense and defense in the game. This paper presents a model for baseball velocity-dependent behavior. Force-displacement data were obtained using quasi-static compression tests to 50% of ball diameter (n = 70 baseballs). The force-displacement curves for a very stiff baseball (Model B) and a softer type (Model C) were characterized by a Mooney-Rivlin model using implicit finite element analysis (ANSYS software, version 6.1). Agreement between experimental and numerical results was excellent for both Model B (C(10) = 0, C(01) = 3.7e(6) Pa) and Model C (C(10) = 0, C(01) = 2.6e(6) Pa). However, this material model was not available in the ANSYS/LSDYNA explicit dynamic software (version 6.1) used to quantify the transient behavior of the ball. Therefore the modeling process was begun again using a linear viscoelastic material. G(infinity), the long-term shear modulus of the material, was determined by the same implicit FEA procedure. Explicit FEA was used to quantify the time-dependent response of each ball in terms of instantaneous shear modulus (G0) and a decay term (beta). The results were evaluated with respect to published experimental data for the ball coefficient of restitution at five velocities (13.4-40.2 ms(-1)) and were in agreement with the experimental values. The model forms the basis for future research on baseball response to impact with the bat. PMID:16131702

  2. Modeling deformation behavior of the baseball.

    PubMed

    Nicholls, Rochelle Llewelyn; Miller, Karol; Elliott, Bruce C

    2005-02-01

    Regulating ball response to impact is one way to control ball exit velocity in baseball. This is necessary to reduce injuries to defensive players and maintain the balance between offense and defense in the game. This paper presents a model for baseball velocity-dependent behavior. Force-displacement data were obtained using quasi-static compression tests to 50% of ball diameter (n = 70 baseballs). The force-displacement curves for a very stiff baseball (Model B) and a softer type (Model C) were characterized by a Mooney-Rivlin model using implicit finite element analysis (ANSYS software, version 6.1). Agreement between experimental and numerical results was excellent for both Model B (C(10) = 0, C(01) = 3.7e(6) Pa) and Model C (C(10) = 0, C(01) = 2.6e(6) Pa). However, this material model was not available in the ANSYS/LSDYNA explicit dynamic software (version 6.1) used to quantify the transient behavior of the ball. Therefore the modeling process was begun again using a linear viscoelastic material. G(infinity), the long-term shear modulus of the material, was determined by the same implicit FEA procedure. Explicit FEA was used to quantify the time-dependent response of each ball in terms of instantaneous shear modulus (G0) and a decay term (beta). The results were evaluated with respect to published experimental data for the ball coefficient of restitution at five velocities (13.4-40.2 ms(-1)) and were in agreement with the experimental values. The model forms the basis for future research on baseball response to impact with the bat.

  3. Modeling electrostrictive deformable mirrors in adaptive optics systems

    NASA Astrophysics Data System (ADS)

    Hom, Craig L.; Dean, Peter D.; Winzer, Stephen R.

    2000-06-01

    Adaptive optics correct light wavefront distortion caused by atmospheric turbulence or internal heating of optical components. This distortion often limits performance in ground-based astronomy, space-based earth observation and high energy laser applications. The heart of the adaptive optics system is the deformable mirror. In this study, an electromechanical model of a deformable mirror was developed as a design tool. The model consisted of a continuous, mirrored face sheet driven with multilayered, electrostrictive actuators. A fully coupled constitutive law simulated the nonlinear, electromechanical behavior of the actuators, while finite element computations determined the mirror's mechanical stiffness observed by the array. Static analysis of the mirror/actuator system related different electrical inputs to the array with the deformation of the mirrored surface. The model also examined the nonlinear influence of internal stresses on the active array's electromechanical performance and quantified crosstalk between neighboring elements. The numerical predictions of the static version of the model agreed well with experimental measurements made on an actual mirror system. The model was also used to simulate the systems level performance of a deformable mirror correcting a thermally bloomed laser beam. The nonlinear analysis determined the commanded actuator voltages required for the phase compensation and the resulting wavefront error.

  4. Geometrical Standard Model Enhancements to the Standard Model of Particle Physics

    NASA Astrophysics Data System (ADS)

    Strickland, Ken; Duvernois, Michael

    2011-10-01

    The Standard Model (SM) is the triumph of our age. As experimentation at the LHC tracks particles for the Higgs phenomena, theoreticians and experimentalist struggle to close in on a cohesive theory. Both suffer greatly as expectation waivers those who seek to move beyond the SM and those who cannot do without. When it seems like there are no more good ideas enter Rate Change Graph Technology (RCGT). From the science of the rate change graph, a Geometrical Standard Model (GSM) is available for comprehensive modeling, giving rich new sources of data and pathways to those ultimate answers we punish ourselves to achieve. As a new addition to science, GSM is a tool that provides a structured discovery and analysis environment. By eliminating value and size, RCGT operates with the rules of RCGT mechanics creating solutions derived from geometry. The GSM rate change graph could be the ultimate validation of the Standard Model yet. In its own right, GSM is created from geometrical intersections and comes with RCGT mechanics, yet parallels the SM to offer critical enhancements. The Higgs Objects along with a host of new objects are introduced to the SM and their positions revealed in this proposed modification to the SM.

  5. Target Recognition Using Neural Networks for Model Deformation Measurements

    NASA Technical Reports Server (NTRS)

    Ross, Richard W.; Hibler, David L.

    1999-01-01

    Optical measurements provide a non-invasive method for measuring deformation of wind tunnel models. Model deformation systems use targets mounted or painted on the surface of the model to identify known positions, and photogrammetric methods are used to calculate 3-D positions of the targets on the model from digital 2-D images. Under ideal conditions, the reflective targets are placed against a dark background and provide high-contrast images, aiding in target recognition. However, glints of light reflecting from the model surface, or reduced contrast caused by light source or model smoothness constraints, can compromise accurate target determination using current algorithmic methods. This paper describes a technique using a neural network and image processing technologies which increases the reliability of target recognition systems. Unlike algorithmic methods, the neural network can be trained to identify the characteristic patterns that distinguish targets from other objects of similar size and appearance and can adapt to changes in lighting and environmental conditions.

  6. Human supervisory approach to modeling industrial scenes using geometric primitives

    SciTech Connect

    Luck, J.P.; Little, C.Q.; Roberts, R.S.

    1997-11-19

    A three-dimensional world model is crucial for many robotic tasks. Modeling techniques tend to be either fully manual or autonomous. Manual methods are extremely time consuming but also highly accurate and flexible. Autonomous techniques are fast but inflexible and, with real-world data, often inaccurate. The method presented in this paper combines the two, yielding a highly efficient, flexible, and accurate mapping tool. The segmentation and modeling algorithms that compose the method are specifically designed for industrial environments, and are described in detail. A mapping system based on these algorithms has been designed. It enables a human supervisor to quickly construct a fully defined world model from unfiltered and unsegmented real-world range imagery. Examples of how industrial scenes are modeled with the mapping system are provided.

  7. Plate tectonic models for Indian Ocean ``intraplate'' deformation

    NASA Astrophysics Data System (ADS)

    Wiens, Douglas A.; Stein, Seth; Demets, Charles; Gordon, Richard G.; Stein, Carol

    1986-12-01

    The equatorial region of the conventionally defined Indo-Australian plate has long been recognized as containing a type example of intense "intraplate" deformation. We trace the development of tectonic models for the area to illustrate techniques for the analysis of such deformation. The identification of anomalous seismicity near the Ninetyeast and Chagos-Laccadive Ridges demonstrated the existence of the deformation. Focal mechanisms from recent and historic earthquakes showed strike-slip motion occurring along the Ninetyeast Ridge; seismic moment data allowed the rate to be estimated. Similar studies showed north-south tension in the Chagos Bank region and north-south compression in the region between the Ninetyeast and Chagos ridges. Global plate motion studies indicated non-closure of the Indian Ocean triple junction, suggesting the conventional plate geometry was inadequate for a rigid plate description of the area. Gravity and marine geophysical data indicated intense north-south compressional deformation south of the Bay of Bengal. These observations are reconciled by a plate motion model in which Australia and India lie on distinct plates divided by a boundary that intersects the Central Indian Ridge near the equator. In this model Arabia, usually considered a separate plate, has negligible motion relative to India. The resulting Euler vector for Australia relative to Indo-Arabia lies just east of the Central Indian Ridge, and predicts approximately 0.5-1.5 cm/yr compression in the Central Indian Basin and 1.5-2 cm/yr strike-slip motion along the northern Ninetyeast Ridge, consistent with the seismological and geophysical data. In contrast to conventional oceanic plate boundaries, the boundary deformation is distributed over a wide zone. This diffuse nature may reflect either the boundary's recent inception or slow rate of motion. Analysis of seismicity and deformation in the boundary zone should offer insights into the mechanics of its development and its

  8. Acquisition of detailed laryngeal flow measurements in geometrically realistic models

    PubMed Central

    Farley, Jayrin; Thomson, Scott L.

    2011-01-01

    Characterization of laryngeal flow velocity fields is important to understanding vocal fold vibration and voice production. One common method for acquiring flow field data is particle image velocimetry (PIV). However, because using PIV with models that have curved surfaces is problematic due to optical distortion, experimental investigations of laryngeal airflow are typically performed using models with idealized geometries. In this paper a method for acquiring PIV data using models with realistic geometries is presented. Sample subglottal, intraglottal, and supraglottal PIV data are shown. Capabilities and limitations are discussed, and suggestions for future implementation are provided. PMID:21877775

  9. Models for determining the geometrical properties of halo coronal mass ejections

    NASA Astrophysics Data System (ADS)

    Zhao, X.; Liu, Y.

    2005-12-01

    To this day, the prediction of space weather effects near the Earth suffer from a fundamental problem: the necessary condition for determining whether or not and when a part of the huge interplanetary counterpart (ICME) of frontside halo coronal mass ejections (CMEs) is able to hit the Earth and generate goemagnetic storms, i.e., the real angular width, the propagation direction and speed of the CMEs, cannot be measured directly because of the unfavorable geometry. To inverse these geometrical and kinematical properties we have recently developed a few geometrical models, such as the cone model, the ice cream cone model, and the spherical cone model. The inversing solution of the cone model for the 12 may 1997 halo CME has been used as an input to the ENLIL model (a 3D MHD solar wind code) and successfully predicted the ICME near the Earth (Zhao, Plukett & Liu, 2002; Odstrcil, Riley & Zhao, 2004). After briefly describing the geometrical models this presentation will discuss: 1. What kind of halo CMEs can be inversed? 2. How to select the geometrical models given a specific halo CME? 3. Whether or not the inversing solution is unique?

  10. Videogrammetric Model Deformation Measurement Technique for Wind Tunnel Applications

    NASA Technical Reports Server (NTRS)

    Barrows, Danny A.

    2006-01-01

    Videogrammetric measurement technique developments at NASA Langley were driven largely by the need to quantify model deformation at the National Transonic Facility (NTF). This paper summarizes recent wind tunnel applications and issues at the NTF and other NASA Langley facilities including the Transonic Dynamics Tunnel, 31-Inch Mach 10 Tunnel, 8-Ft high Temperature Tunnel, and the 20-Ft Vertical Spin Tunnel. In addition, several adaptations of wind tunnel techniques to non-wind tunnel applications are summarized. These applications include wing deformation measurements on vehicles in flight, determining aerodynamic loads based on optical elastic deformation measurements, measurements on ultra-lightweight and inflatable space structures, and the use of an object-to-image plane scaling technique to support NASA s Space Exploration program.

  11. Viscoelastic models with consistent hypoelasticity for fluids undergoing finite deformations

    NASA Astrophysics Data System (ADS)

    Altmeyer, Guillaume; Rouhaud, Emmanuelle; Panicaud, Benoit; Roos, Arjen; Kerner, Richard; Wang, Mingchuan

    2015-08-01

    Constitutive models of viscoelastic fluids are written with rate-form equations when considering finite deformations. Trying to extend the approach used to model these effects from an infinitesimal deformation to a finite transformation framework, one has to ensure that the tensors and their rates are indifferent with respect to the change of observer and to the superposition with rigid body motions. Frame-indifference problems can be solved with the use of an objective stress transport, but the choice of such an operator is not obvious and the use of certain transports usually leads to physically inconsistent formulation of hypoelasticity. The aim of this paper is to present a consistent formulation of hypoelasticity and to combine it with a viscosity model to construct a consistent viscoelastic model. In particular, the hypoelastic model is reversible.

  12. Sensitivity analysis of geometric errors in additive manufacturing medical models.

    PubMed

    Pinto, Jose Miguel; Arrieta, Cristobal; Andia, Marcelo E; Uribe, Sergio; Ramos-Grez, Jorge; Vargas, Alex; Irarrazaval, Pablo; Tejos, Cristian

    2015-03-01

    Additive manufacturing (AM) models are used in medical applications for surgical planning, prosthesis design and teaching. For these applications, the accuracy of the AM models is essential. Unfortunately, this accuracy is compromised due to errors introduced by each of the building steps: image acquisition, segmentation, triangulation, printing and infiltration. However, the contribution of each step to the final error remains unclear. We performed a sensitivity analysis comparing errors obtained from a reference with those obtained modifying parameters of each building step. Our analysis considered global indexes to evaluate the overall error, and local indexes to show how this error is distributed along the surface of the AM models. Our results show that the standard building process tends to overestimate the AM models, i.e. models are larger than the original structures. They also show that the triangulation resolution and the segmentation threshold are critical factors, and that the errors are concentrated at regions with high curvatures. Errors could be reduced choosing better triangulation and printing resolutions, but there is an important need for modifying some of the standard building processes, particularly the segmentation algorithms.

  13. Evolution of Geometric Sensitivity Derivatives from Computer Aided Design Models

    NASA Technical Reports Server (NTRS)

    Jones, William T.; Lazzara, David; Haimes, Robert

    2010-01-01

    The generation of design parameter sensitivity derivatives is required for gradient-based optimization. Such sensitivity derivatives are elusive at best when working with geometry defined within the solid modeling context of Computer-Aided Design (CAD) systems. Solid modeling CAD systems are often proprietary and always complex, thereby necessitating ad hoc procedures to infer parameter sensitivity. A new perspective is presented that makes direct use of the hierarchical associativity of CAD features to trace their evolution and thereby track design parameter sensitivity. In contrast to ad hoc methods, this method provides a more concise procedure following the model design intent and determining the sensitivity of CAD geometry directly to its respective defining parameters.

  14. A New Model for Episodic Caldera Deformation at Yellowstone

    NASA Astrophysics Data System (ADS)

    Cervelli, P. F.; Gervais, S. M.; Lowenstern, J. B.; Wicks, C. W.

    2012-12-01

    For nearly 90 years, geodetic measurements at Yellowstone have shown recurring episodes of uplift and subsidence confined mostly to the caldera but also extending into the Norris Geyser Basin. The most recent such episode began in late 2004 with the onset of caldera-wide uplift that continued for about 5 years before switching to subsidence in late 2009. The physical mechanism driving the deformation is unknown, though several researchers have proposed kinematic models that can reproduce the observed data. The "Lake" earthquake swarm, which occurred in the northern part of Yellowstone Lake from December 2008 through January 2009, provides a new constraint on caldera deformation models. The timing of the swarm correlates with an abrupt change in local deformation, which preceded the gradual transition from uplift to subsidence in late 2009. Thus, caldera deformation, at least in the vicinity of Yellowstone Lake, consists of two (or more) distinct parts, implying the existence of two (or more) distinct deformation sources. This fresh information leads us to propose a new kinematic model for deformation at Yellowstone, which we develop from the last 15 years of continuous GPS and InSAR data. Our new model consists of three deformation sources: (1) a cauldron block source that is subject to a constant displacement at its base while its surrounding ring fault remains locked; (2) a pressurizing (or depressurizing) spherical cavity near the Norris Geyser Basin, which is known to deform separately from the caldera; and (3) a pressurizing (or depressurizing) spherical cavity at the Sour Creek Dome, which we infer from the abrupt change in deformation rate after the Lake Swarm. We use the GPS and InSAR data from the period of strongest signal, summer 2005 through summer 2007, to optimize the geometry of the three sources: the locations and depths of the spherical cavity, and the perimeter of the cauldron block. We then, while holding their geometry fixed, estimate the

  15. Microscale modeling of fluid flow-geomechanics-seismicity: Relationship between permeability and seismic source response in deformed rock joints

    NASA Astrophysics Data System (ADS)

    Raziperchikolaee, S.; Alvarado, V.; Yin, S.

    2014-09-01

    Studying rock joint deformation including both slippage and opening mechanisms provides an opportunity to investigate the connection between the permeability and seismic source mechanisms. A microscale fluid flow-geomechanics-seismicity model was built to evaluate the transport response and failure mechanism of microcracks developed along a joint in Berea sandstone samples during deformation. The modeling method considers comprehensive grain-cement interactions. Fluid flow behavior is obtained through a realistic network model of the pore space in the compacted assembly. The geometric description of the complex pore structure is characterized to predict permeability of the rock sample as a function of rock deformation by using a dynamic pore network model. As a result of microcracks development, forces and displacements in grains involved in bond breakage are measured to determine seismic moment tensor. Shear and nonshear displacements are applied to the joint samples to investigate their effects on permeability evolution and failure mechanism of microcracks during joint deformation. In addition, the effect of joint roughness is analyzed by performing numerical compression tests. We also investigate how confining pressure affects volumetric deformation leading to opening or closure of developed microcracks and permeability changes of samples with joints.

  16. Geometric phases and quantum correlations dynamics in spin-boson model

    SciTech Connect

    Wu, Wei; Xu, Jing-Bo

    2014-01-28

    We explore the dynamics of spin-boson model for the Ohmic bath by employing the master equation approach and obtain an explicit expression of reduced density matrix. We also calculate the geometric phases of the spin-boson model by making use of the analytical results and discuss how the dissipative bosonic environment affects geometric phases. Furthermore, we investigate the dynamics of quantum discord and entanglement of two qubits each locally interacting with its own independent bosonic environments. It is found that the decay properties of quantum discord and entanglement are sensitive to the choice of initial state's parameter and coupling strength between system and bath.

  17. In-room breathing motion estimation from limited projection views using a sliding deformation model

    NASA Astrophysics Data System (ADS)

    Delmon, V.; Vandemeulebroucke, J.; Pinho, R.; Vila Oliva, M.; Sarrut, D.; Rit, S.

    2014-03-01

    Purpose: To estimate in-room breathing motion from a limited number of 2D cone-beam (CB) projection images by registering them to a phase of the 4D planning CT. Methods: Breathing motion was modelled using a piecewise continuous B-spline representation [1], allowing to preserve the sliding along the thoracic wall while limiting the degrees of freedom. The deformed target 3D image was subsequently used to generate Digitally Reconstructed Radiographs (DRR). The Normalized Correlation Coefficient (NCC) between the measured projection images and the DRR was computed in the 2D projection space. However, the partial derivatives of the NCC relative to the transform parameters were backprojected into the 3D space, avoiding the projection of the transform Jacobian matrix which is computationally intractable [2]. Results: The method was quantitatively evaluated on 16 lung cancer patients. 40 CB projection images were simulated using the end-exhale phase of the 4D planning CT and the geometric parameters of a clinical CB protocol. The end-inhale phase was deformed to match these simulated projections. The Target Registration Error (TRE) decreased from 8.8 mm to 2.0 mm while the TRE obtained from the 3D/3D registration of the reconstructed CBCT was significantly worse (2.6 mm), due to view aliasing artefacts. We also provide the motion compensated image reconstructed from a real CB acquisition showing the quality improvement brought by the in-room deformation model compared to the planning motion model. Conclusions: We have developed a 2D/3D deformable registration algorithm that enables in-room breathing motion estimation from cone-beam projection images.

  18. [Research of Feedback Algorithm and Deformable Model Based on Improved Spring-mass Model].

    PubMed

    Chen, Weidong; Chen, Panpan; Zhu, Qiguang

    2015-10-01

    A new diamond-based variable spring-mass model has been proposed in this study. It can realize the deformation simulation for different organs by changing the length of the springs, spring coefficient and initial angle. The virtual spring joined in the model is used to provide constraint and to avoid hyperelastic phenomenon when excessive force appears. It is also used for the calculation of force feedback in the deformation process. With the deformation force feedback algorithm, we calculated the deformation area of each layer through screening effective particles, and contacted the deformation area with the force. This simplified the force feedback algorithm of traditional spring-particle model. The deformation simulation was realized by the PHANTOM haptic interaction devices based on this model. The experimental results showed that the model had the advantage of simple structure and of being easy to implement. The deformation force feedback algorithm reduces the number of the deformation calculation, improves the real-time deformation and has a more realistic deformation effect.

  19. Quasicontinuum Models of Interfacial Structure and Deformation

    SciTech Connect

    Shenoy, V.B.; Miller, R.; Phillips, R.; Tadmor, E.B.; Ortiz, M.

    1998-01-01

    Microscopic models of the interaction between grain boundaries (GBs) and both dislocations and cracks are of importance in understanding the role of microstructure in altering the mechanical properties of a material. A recently developed mixed atomistic and continuum method is reformulated to allow for the examination of the interactions between GBs, dislocations, and cracks. These calculations elucidate plausible microscopic mechanisms for these defect interactions and allow for the quantitative evaluation of critical parameters such as the force needed to induce GB migration. {copyright} {ital 1998} {ital The American Physical Society}

  20. Thickness Reconstruction of Layers by 3D Geometrical Model to Characterize Caledonian Tectonic Complex and Data in Latvia

    NASA Astrophysics Data System (ADS)

    Ukass, J.; Saks, T.; Popovs, K.

    2012-04-01

    In present study we attempt to verify the 3D geological model, which has been built on a variety of heterogeneous data sources for the Baltic Basin (BB). Data describing the displacement along the faults and associated thickness changes of the syntectonic strata is sparse and reflects only regional relevance (Brangulis & Konsins 2002). Borehole logs provide most reliable and comprehensive data source for reconstructing the structural geology of the Latvia sedimentary cover as sufficient quality seismic data is available only for the local scale structures. Based on the thickness analysis of the boreholes rough resolution 3D geological tectonic block model was developed to deconstruct the geological structure of the Latvia Caledonian sedimentary sequence. MOSYS modeling system was used for the geological structure modeling, developed within the PUMA project (Sennikovs et al, 2011). Algorithmic genetic approach was applied to interpolate data of well logs as strata volume and sequentially to reconstruct the post-deformation situation. This approach allows modifying model construction in any step and all processes are fully documented and are repeatable. Geometrical model consists of 33 tectonic blocks bordered by the faults which were distributed by interpreting displacement amount of the blocks along the faults providing an opportunity to characterize common tectonic evolution. The study results indicate insignificant thickness change of the Ordovician and Silurian strata along the faults suggesting that major slip event along the faults occurred during the late Silurian and early Devonian, and some secondary fault reactivation during the middle Devonian Narva time. Uplift of the territory during this time is confirmed by the presence of the regional unconformity. Constructed rough resolution 3D geometrical model suggests shortening along the horizontal axis approximately 10 - 20% but most of the shortening has occurred in the central-west part of Latvia where it

  1. Modeling RNA loops using sequence homology and geometric constraints

    PubMed Central

    Schudoma, Christian; May, Patrick; Walther, Dirk

    2010-01-01

    Summary: RNA loop regions are essential structural elements of RNA molecules influencing both their structural and functional properties. We developed RLooM, a web application for homology-based modeling of RNA loops utilizing template structures extracted from the PDB. RLooM allows the insertion and replacement of loop structures of a desired sequence into an existing RNA structure. Furthermore, a comprehensive database of loops in RNA structures can be accessed through the web interface. Availability and Implementation: The application was implemented in Python, MySQL and Apache. A web interface to the database and loop modeling application is freely available at http://rloom.mpimp-golm.mpg.de Contact: schudoma@mpimp-golm.mpg.de; may@mpimp-golm.mpg.de; walther@mpimp-golm.mpg.de PMID:20427516

  2. Volumetric Intraoperative Brain Deformation Compensation: Model Development and Phantom Validation

    PubMed Central

    DeLorenzo, Christine; Papademetris, Xenophon; Staib, Lawrence H.; Vives, Kenneth P.; Spencer, Dennis D.; Duncan, James S.

    2012-01-01

    During neurosurgery, nonrigid brain deformation may affect the reliability of tissue localization based on preoperative images. To provide accurate surgical guidance in these cases, preoperative images must be updated to reflect the intraoperative brain. This can be accomplished by warping these preoperative images using a biomechanical model. Due to the possible complexity of this deformation, intraoperative information is often required to guide the model solution. In this paper, a linear elastic model of the brain is developed to infer volumetric brain deformation associated with measured intraoperative cortical surface displacement. The developed model relies on known material properties of brain tissue, and does not require further knowledge about intraoperative conditions. To provide an initial estimation of volumetric model accuracy, as well as determine the model’s sensitivity to the specified material parameters and surface displacements, a realistic brain phantom was developed. Phantom results indicate that the linear elastic model significantly reduced localization error due to brain shift, from >16 mm to under 5 mm, on average. In addition, though in vivo quantitative validation is necessary, preliminary application of this approach to images acquired during neocortical epilepsy cases confirms the feasibility of applying the developed model to in vivo data. PMID:22562728

  3. Reappraisal of a model for deformed special relativity

    NASA Astrophysics Data System (ADS)

    Gubitosi, Giulia; Magueijo, João

    2016-06-01

    We revisit one of the earliest proposals for deformed dispersion relations in the light of recent results on dynamical dimensional reduction and production of cosmological fluctuations. Depending on the specification of the measure of integration and the addition rule in momentum space the model may be completed so as to merely deform Lorentz invariance, or so as to introduce a preferred frame. Models which violate Lorentz invariance have a negative UV asymptotic dimension and a very red spectrum of quantum vacuum fluctuations. Instead, models which preserve frame independence can exhibit running to a UV dimension of two, and a scale-invariant spectrum of fluctuations. The bispectrum of the fluctuations is another point of divergence between the two casings proposed here for the original model.

  4. Country neighborhood network on territory and its geometrical model

    NASA Astrophysics Data System (ADS)

    Xuan, Qi; Wu, Tie-Jun

    2009-04-01

    The country neighborhood network, where nodes represent countries and two nodes are considered linked if the corresponding countries are neighbors on territory, is created and its giant component, the Asia, Europe, and Africa (AEA) cluster, is carefully studied in this paper. It is found that, as common, the degree distribution and the clustering function of the AEA cluster are both compatible with scale-free property, besides, the AEA cluster presents a little disassortativity, and its near power-law country area-degree relationship with the exponent close to 1.7 may imply a fractal dimension close to 1.2 of country borderlines in the AEA continent. It is also revealed that the average difference of population density between two countries obeys an approximately increasing function of the shortest path length between them, which may suggest a gradual consensus of population density in the AEA cluster. A simple unity rule is then adopted to model the AEA cluster and such model explains the AEA cluster very well in most aspects, e.g., power-law domain area distribution and fractal domain borderlines, etc., except that the network derived by the model has stronger disassortativity, which may be explained by the fact that, in the evolution history of countries, unbalanced neighbors are more likely to be united as one than balanced neighbors. Additionally, the network evolving process can be divided into three periods, defined as formation period, growth period, and combination period, and there are indications that the AEA cluster is in its third period.

  5. Segmentation of pelvic structures for planning CT using a geometrical shape model tuned by a multi-scale edge detector

    NASA Astrophysics Data System (ADS)

    Martínez, Fabio; Romero, Eduardo; Dréan, Gaël; Simon, Antoine; Haigron, Pascal; de Crevoisier, Renaud; Acosta, Oscar

    2014-03-01

    Accurate segmentation of the prostate and organs at risk in computed tomography (CT) images is a crucial step for radiotherapy planning. Manual segmentation, as performed nowadays, is a time consuming process and prone to errors due to the a high intra- and inter-expert variability. This paper introduces a new automatic method for prostate, rectum and bladder segmentation in planning CT using a geometrical shape model under a Bayesian framework. A set of prior organ shapes are first built by applying principal component analysis to a population of manually delineated CT images. Then, for a given individual, the most similar shape is obtained by mapping a set of multi-scale edge observations to the space of organs with a customized likelihood function. Finally, the selected shape is locally deformed to adjust the edges of each organ. Experiments were performed with real data from a population of 116 patients treated for prostate cancer. The data set was split in training and test groups, with 30 and 86 patients, respectively. Results show that the method produces competitive segmentations w.r.t standard methods (averaged dice = 0.91 for prostate, 0.94 for bladder, 0.89 for rectum) and outperforms the majority-vote multi-atlas approaches (using rigid registration, free-form deformation and the demons algorithm).

  6. Segmentation of pelvic structures for planning CT using a geometrical shape model tuned by a multi-scale edge detector.

    PubMed

    Martínez, Fabio; Romero, Eduardo; Dréan, Gaël; Simon, Antoine; Haigron, Pascal; de Crevoisier, Renaud; Acosta, Oscar

    2014-03-21

    Accurate segmentation of the prostate and organs at risk in computed tomography (CT) images is a crucial step for radiotherapy planning. Manual segmentation, as performed nowadays, is a time consuming process and prone to errors due to the a high intra- and inter-expert variability. This paper introduces a new automatic method for prostate, rectum and bladder segmentation in planning CT using a geometrical shape model under a Bayesian framework. A set of prior organ shapes are first built by applying principal component analysis to a population of manually delineated CT images. Then, for a given individual, the most similar shape is obtained by mapping a set of multi-scale edge observations to the space of organs with a customized likelihood function. Finally, the selected shape is locally deformed to adjust the edges of each organ. Experiments were performed with real data from a population of 116 patients treated for prostate cancer. The data set was split in training and test groups, with 30 and 86 patients, respectively. Results show that the method produces competitive segmentations w.r.t standard methods (averaged dice = 0.91 for prostate, 0.94 for bladder, 0.89 for rectum) and outperforms the majority-vote multi-atlas approaches (using rigid registration, free-form deformation and the demons algorithm).

  7. A geometric model for initial orientation errors in pigeon navigation.

    PubMed

    Postlethwaite, Claire M; Walker, Michael M

    2011-01-21

    All mobile animals respond to gradients in signals in their environment, such as light, sound, odours and magnetic and electric fields, but it remains controversial how they might use these signals to navigate over long distances. The Earth's surface is essentially two-dimensional, so two stimuli are needed to act as coordinates for navigation. However, no environmental fields are known to be simple enough to act as perpendicular coordinates on a two-dimensional grid. Here, we propose a model for navigation in which we assume that an animal has a simplified 'cognitive map' in which environmental stimuli act as perpendicular coordinates. We then investigate how systematic deviation of the contour lines of the environmental signals from a simple orthogonal arrangement can cause errors in position determination and lead to systematic patterns of directional errors in initial homing directions taken by pigeons. The model reproduces patterns of initial orientation errors seen in previously collected data from homing pigeons, predicts that errors should increase with distance from the loft, and provides a basis for efforts to identify further sources of orientation errors made by homing pigeons.

  8. Polarity-Driven Geometrical Cluster Growth Model of Budding Yeast

    NASA Astrophysics Data System (ADS)

    Cabral, Reniel B.; Lim, May T.

    We present a polarity-driven activator-inhibitor model of budding yeast in a two-dimensional medium wherein impeding metabolites secretion (or growth inhibitors) and growth directionality are determined by the local nutrient level. We found that colony size and morphological features varied with nutrient concentration. A branched-type morphology is associated with high impeding metabolite concentration together with a high fraction of distal budding, while opposite conditions (low impeding metabolite concentration, high fraction of proximal budding) promote Eden-type patterns. Increasing the anisotropy factor (or polarity) produced other spatial patterns akin to the electrical breakdown under varying electric field. Rapid changes in the colony morphology, which we conjecture to be equivalent to a transition from an inactive quiescent state to an active budding state, appeared when nutrients were limited.

  9. A coupled model for solid deformation and gas leak flow

    NASA Astrophysics Data System (ADS)

    Sun, Peide; Wan, Huagen

    2004-09-01

    From the viewpoint of interaction mechanics of solid and gas, a coupled mathematical model is presented for solid coal/rock-mass deformation and gas leak flow in parallel deformable coal seams. Numerical solutions using the strong implicit procedure (SIP) method to the coupled mathematical model for double parallel coal seams are also developed in detail. Numerical simulations for the prediction of safety range using protection layer mining are performed with experimental data from a mine with potential danger of coal/gas outbursts. Analyses show that the numerical simulation results are consistent with the measured data on the spot. The coupled model shows a positive future for applications in a wide range of gas-leak-flow-related problems in mining engineering, gas drainage engineering and mining safety engineering. Copyright

  10. Dynamic deformable models for 3D MRI heart segmentation

    NASA Astrophysics Data System (ADS)

    Zhukov, Leonid; Bao, Zhaosheng; Gusikov, Igor; Wood, John; Breen, David E.

    2002-05-01

    Automated or semiautomated segmentation of medical images decreases interstudy variation, observer bias, and postprocessing time as well as providing clincally-relevant quantitative data. In this paper we present a new dynamic deformable modeling approach to 3D segmentation. It utilizes recently developed dynamic remeshing techniques and curvature estimation methods to produce high-quality meshes. The approach has been implemented in an interactive environment that allows a user to specify an initial model and identify key features in the data. These features act as hard constraints that the model must not pass through as it deforms. We have employed the method to perform semi-automatic segmentation of heart structures from cine MRI data.

  11. Phenomenological model for transient deformation based on state variables

    SciTech Connect

    Jackson, M S; Cho, C W; Alexopoulos, P; Mughrabi, H; Li, C Y

    1980-01-01

    The state variable theory of Hart, while providing a unified description of plasticity-dominated deformation, exhibits deficiencies when it is applied to transient deformation phenomena at stresses below yield. It appears that the description of stored anelastic strain is oversimplified. Consideration of a simple physical picture based on continuum dislocation pileups suggests that the neglect of weak barriers to dislocation motion is the source of these inadequacies. An appropriately modified description incorporating such barriers then allows the construction of a macroscopic model including transient effects. Although the flow relations for the microplastic element required in the new theory are not known, tentative assignments may be made for such functions. The model then exhibits qualitatively correct behavior when tensile, loading-unloading, reverse loading, and load relaxation tests are simulated. Experimental procedures are described for determining the unknown parameters and functions in the new model.

  12. Computational Flow Dynamics in a Geometric Model of Intussusceptive Angiogenesis

    PubMed Central

    Filipovic, Nenad; Tsuda, Akira; Lee, Grace S.; Miele, Lino F.; Lin, Miao; Konerding, Moritz A.; Mentzer, Steven J.

    2009-01-01

    Intussusceptive angiogenesis is a process that forms new blood vessels by the intraluminal division of a single blood vessel into two lumens. Referred to as nonsprouting or intussusceptive angiogenesis, this angiogenic process has been described in morphogenesis and chronic inflammation. Mechanical forces are relevant to the structural changes associated with intussusceptive angiogenesis because of the growing evidence that physiologic forces influence gene transcription. To provide a detailed analysis of the spatial distribution of physiologic shear stresses, we developed a 3D finite element model of the intraluminal intussusceptive pillar. Based on geometries observed in adult intussusceptive angiogenesis, physiologic shear stress distribution was studied at pillar sizes ranging from 1μm to 10μm. The wall shear stress calculations demonstrated a marked spatial dependence with discrete regions of high shear stress on the intraluminal pillar and lateral vessel wall. Further, the intussusceptive pillar created a “dead zone” of low wall shear stress between the pillar and vessel bifurcation apex. We conclude that the intraluminal flow fields demonstrate sufficient spatial resolution and dynamic range to participate in the regulation of intussusceptive angiogenesis by intraluminal flow fields. PMID:19715707

  13. Geometric mechanics for modelling bioinspired robots locomotion: from rigid to continuous (soft) systems

    NASA Astrophysics Data System (ADS)

    Boyer, Frederic; Porez, Mathieu; Renda, Federico

    This talk presents recent geometric tools developed to model the locomotion dynamics of bio-inspired robots. Starting from the model of discrete rigid multibody systems we will rapidly shift to the case of continuous systems inspired from snakes and fish. To that end, we will build on the model of Cosserat media. This extended picture of geometric locomotion dynamics (inspired from fields' theory) will allow us to introduce models of swimming recently used in biorobotics. We will show how modeling a fish as a one-dimensional Cosserat medium allows to recover and extend the Large Amplitude Elongated Body theory of J. Lighthill and to apply it to an eel-like robot. In the same vein, modeling the mantle of cephalopods as a two dimensional Cosserat medium will build a basis for studying the jet propelling of a soft octopus like robot.

  14. Some aspects of the geometrization of classical electrodynamics based on the supercontinuum model

    SciTech Connect

    Noskov, V.I.

    1995-11-01

    The main ideas of the geometrization of classical electrodynamics based on the model of a supercontinuum (SC) are described in detail and the geodesic equation is derived. A relativistic Lagrangian equation is found for a free point particle in the SC. The affiliation of possible SC metric geometries to the class of Finsler geometries is analyzed. It is shown that they are not Finsler geometries, and Finsler geometries are unsuitable for the geometrization problem. Some physical consequences of the simplest metric version of SC geometry are discussed.

  15. Geometric versus finite element modeling current and future trends at Northrop

    NASA Technical Reports Server (NTRS)

    Bajaj, Shiv K.

    1987-01-01

    Engineering Automation at Northrop encompasses the various design and analytical phases of air vehicle development. Design systems addresses automation of engineering/tooling design and computer aided manufacturing processes. The analysis systems automate aeroelastic modeling and postprocessing analysis results. These systems interface with aircraft loft and geometric entities thru localized transfer techniques. However, total integration effort based on a geometric database nucleus with peripheral design, analytical and manufacturing systems is well underway. An outline of the present and future trends is presented to help channel the RPI effort in this direction.

  16. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach.

    PubMed

    Arrieta, Jorge; Cartwright, Julyan H E; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan

    2015-01-01

    Mixing fluid in a container at low Reynolds number--in an inertialess environment--is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the "belly phase," peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing. PMID:26154384

  17. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach

    PubMed Central

    Arrieta, Jorge; Cartwright, Julyan H. E.; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan

    2015-01-01

    Mixing fluid in a container at low Reynolds number— in an inertialess environment—is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the “belly phase,” peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing. PMID:26154384

  18. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach.

    PubMed

    Arrieta, Jorge; Cartwright, Julyan H E; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan

    2015-01-01

    Mixing fluid in a container at low Reynolds number--in an inertialess environment--is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the "belly phase," peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing.

  19. On the geometrical interpretation of scale-invariant models of inflation

    NASA Astrophysics Data System (ADS)

    Karananas, Georgios K.; Rubio, Javier

    2016-10-01

    We study the geometrical properties of scale-invariant two-field models of inflation. In particular, we show that when the field-derivative space in the Einstein frame is maximally symmetric during inflation, the inflationary predictions can be universal and independent of the details of the theory.

  20. Nonlinear Geometric Effects in Mechanical Bistable Morphing Structures

    NASA Astrophysics Data System (ADS)

    Chen, Zi; Guo, Qiaohang; Majidi, Carmel; Chen, Wenzhe; Srolovitz, David J.; Haataja, Mikko P.

    2012-09-01

    Bistable structures associated with nonlinear deformation behavior, exemplified by the Venus flytrap and slap bracelet, can switch between different functional shapes upon actuation. Despite numerous efforts in modeling such large deformation behavior of shells, the roles of mechanical and nonlinear geometric effects on bistability remain elusive. We demonstrate, through both theoretical analysis and tabletop experiments, that two dimensionless parameters control bistability. Our work classifies the conditions for bistability, and extends the large deformation theory of plates and shells.

  1. Modeling photosynthesis of discontinuous plant canopies by linking Geometric Optical Radiative Transfer model with biochemical processes

    NASA Astrophysics Data System (ADS)

    Xin, Q.; Gong, P.; Li, W.

    2015-02-01

    Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT) model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP) for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily time scales. We also demonstrate that the ambient CO2 concentration influences daytime vegetation photosynthesis, which needs to be considered in state-of-the-art biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.

  2. Modeling of friction-induced deformation and microstructures.

    SciTech Connect

    Michael, Joseph Richard; Prasad, Somuri V.; Jungk, John Michael; Cordill, Megan J.; Bammann, Douglas J.; Battaile, Corbett Chandler; Moody, Neville Reid; Majumdar, Bhaskar Sinha (New Mexico Institure of Mining and Technology)

    2006-12-01

    Frictional contact results in surface and subsurface damage that could influence the performance, aging, and reliability of moving mechanical assemblies. Changes in surface roughness, hardness, grain size and texture often occur during the initial run-in period, resulting in the evolution of subsurface layers with characteristic microstructural features that are different from those of the bulk. The objective of this LDRD funded research was to model friction-induced microstructures. In order to accomplish this objective, novel experimental techniques were developed to make friction measurements on single crystal surfaces along specific crystallographic surfaces. Focused ion beam techniques were used to prepare cross-sections of wear scars, and electron backscattered diffraction (EBSD) and TEM to understand the deformation, orientation changes, and recrystallization that are associated with sliding wear. The extent of subsurface deformation and the coefficient of friction were strongly dependent on the crystal orientation. These experimental observations and insights were used to develop and validate phenomenological models. A phenomenological model was developed to elucidate the relationships between deformation, microstructure formation, and friction during wear. The contact mechanics problem was described by well-known mathematical solutions for the stresses during sliding friction. Crystal plasticity theory was used to describe the evolution of dislocation content in the worn material, which in turn provided an estimate of the characteristic microstructural feature size as a function of the imposed strain. An analysis of grain boundary sliding in ultra-fine-grained material provided a mechanism for lubrication, and model predictions of the contribution of grain boundary sliding (relative to plastic deformation) to lubrication were in good qualitative agreement with experimental evidence. A nanomechanics-based approach has been developed for characterizing the

  3. Statistical modeling of interfractional tissue deformation and its application in radiation therapy planning

    NASA Astrophysics Data System (ADS)

    Vile, Douglas J.

    In radiation therapy, interfraction organ motion introduces a level of geometric uncertainty into the planning process. Plans, which are typically based upon a single instance of anatomy, must be robust against daily anatomical variations. For this problem, a model of the magnitude, direction, and likelihood of deformation is useful. In this thesis, principal component analysis (PCA) is used to statistically model the 3D organ motion for 19 prostate cancer patients, each with 8-13 fractional computed tomography (CT) images. Deformable image registration and the resultant displacement vector fields (DVFs) are used to quantify the interfraction systematic and random motion. By applying the PCA technique to the random DVFs, principal modes of random tissue deformation were determined for each patient, and a method for sampling synthetic random DVFs was developed. The PCA model was then extended to describe the principal modes of systematic and random organ motion for the population of patients. A leave-one-out study tested both the systematic and random motion model's ability to represent PCA training set DVFs. The random and systematic DVF PCA models allowed the reconstruction of these data with absolute mean errors between 0.5-0.9 mm and 1-2 mm, respectively. To the best of the author's knowledge, this study is the first successful effort to build a fully 3D statistical PCA model of systematic tissue deformation in a population of patients. By sampling synthetic systematic and random errors, organ occupancy maps were created for bony and prostate-centroid patient setup processes. By thresholding these maps, PCA-based planning target volume (PTV) was created and tested against conventional margin recipes (van Herk for bony alignment and 5 mm fixed [3 mm posterior] margin for centroid alignment) in a virtual clinical trial for low-risk prostate cancer. Deformably accumulated delivered dose served as a surrogate for clinical outcome. For the bony landmark setup

  4. Resurgence in η-deformed Principal Chiral Models

    NASA Astrophysics Data System (ADS)

    Demulder, Saskia; Dorigoni, Daniele; Thompson, Daniel C.

    2016-07-01

    We study the SU(2) Principal Chiral Model (PCM) in the presence of an integrable η-deformation. We put the theory on {R}× {S}^1 with twisted boundary conditions and then reduce the circle to obtain an effective quantum mechanics associated with the Whittaker-Hill equation. Using resurgent analysis we study the large order behaviour of perturbation theory and recover the fracton events responsible for IR renormalons. The fractons are modified from the standard PCM due to the presence of this η-deformation but they are still the constituents of uniton-like solutions in the deformed quantum field theory. We also find novel SL(2,{C}) saddles, thus strengthening the conjecture that the semi-classical expansion of the path integral gives rise to a resurgent transseries once written as a sum over Lefschetz thimbles living in a complexification of the field space. We conclude by connecting our quantum mechanics to a massive deformation of the {N} = 2 4-d gauge theory with gauge group SU(2) and N f = 2.

  5. Experimental modelling of ground deformation associated with shallow magma intrusions

    NASA Astrophysics Data System (ADS)

    Galland, O.

    2012-04-01

    Active volcanoes experience ground deformation as a response to the dynamics of underground magmatic systems. The analysis of ground deformation patterns may provide important constraints on the dynamics and shape of the underlying volcanic plumbing systems. Nevertheless, these analyses usually take into account simplistic shapes (sphere, dykes, sills) and the results cannot be verified as the modelled systems are buried. In this contribution, I will present new results from experimental models of magma intrusion, in which both the evolution of ground deformation during intrusion and the shape of the underlying intrusion are monitored in 3D. The models consisted of a molten vegetable oil, simulating low viscosity magma, injected into cohesive fine-grained silica flour, simulating the brittle upper crust; oil injection resulted is sheet intrusions (dykes, sills and cone sheets). The initial topography in the models was flat. While the oil was intruding, the surface of the models slightly lifted up to form a smooth relief, which was mapped through time. After an initial symmetrical development, the uplifted area developed asymmetrically; at the end of the experiments, the oil always erupted at the steepest edge of the uplifted area. After the experiment, the oil solidified, the intrusion was excavated and the shape of its top surface mapped. The comparison between the uplifted zone and the underlying intrusions showed that (1) the complex shapes of the uplifted areas reflected the complex shapes of the underlying intrusions, (2) the time evolution of the uplifted zone was correlated with the evolution of the underlying intrusion, and (3) the early asymmetrical evolution of the uplifted areas can be used to predict the location of the eruption of the oil. The experimental results also suggest that complex intrusion shapes (inclined sheet, cone sheet, complex sill) may have to be considered more systematically in analyses of ground deformation patterns on volcanoes.

  6. Experimental modelling of ground deformation associated with shallow magma intrusions

    NASA Astrophysics Data System (ADS)

    Galland, Olivier

    2012-02-01

    Active volcanoes experience ground deformation as a response to the dynamics of underground magmatic systems. The analysis of ground deformation patterns may provide important constraints on the dynamics and shape of the underlying volcanic plumbing systems. Nevertheless, these analyses usually take into account simplistic shapes (sphere, dykes, sills) and the results cannot be verified as the modelled systems are buried. In this paper, I present new results from experimental models of magma intrusion, in which both the evolution of ground deformation during intrusion and the shape of the underlying intrusion are monitored. The models consisted of a molten vegetable oil, simulating low viscosity magma, injected into cohesive fine-grained silica flour, simulating the brittle upper crust; oil injection resulted is sheet intrusions (dykes, sills and cone sheets). The initial topography in the models was flat. While the oil was intruding, the surface of the models slightly lifted up to form a smooth relief, which was mapped through time. After an initial symmetrical development, the uplifted area developed asymmetrically; at the end of the experiments, the oil always erupted at the steepest edge of the uplifted area. After the experiment, the oil solidified, the intrusion was excavated and the shape of its top surface mapped. The comparison between the uplifted zone and the underlying intrusions showed that (1) the complex shapes of the uplifted areas reflected the complex shapes of the underlying intrusions, (2) the time evolution of the uplifted zone was correlated with the evolution of the underlying intrusion, and (3) the early asymmetrical evolution of the uplifted areas can be used to predict the location of the eruption of the oil. The experimental results also suggest that complex intrusion shapes (inclined sheet, cone sheet, complex sill) may have to be considered more systematically in the analyses of ground deformation patterns on volcanoes.

  7. Dislocation models of interseismic deformation in the western United States

    USGS Publications Warehouse

    Pollitz, F.F.; McCrory, P.; Svarc, J.; Murray, J.

    2008-01-01

    The GPS-derived crustal velocity field of the western United States is used to construct dislocation models in a viscoelastic medium of interseismic crustal deformation. The interseismic velocity field is constrained by 1052 GPS velocity vectors spanning the ???2500-km-long plate boundary zone adjacent to the San Andreas fault and Cascadia subduction zone and extending ???1000 km into the plate interior. The GPS data set is compiled from U.S. Geological Survey campaign data, Plate Boundary Observatory data, and the Western U.S. Cordillera velocity field of Bennett et al. (1999). In the context of viscoelastic cycle models of postearthquake deformation, the interseismic velocity field is modeled with a combination of earthquake sources on ???100 known faults plus broadly distributed sources. Models that best explain the observed interseismic velocity field include the contributions of viscoelastic relaxation from faulting near the major plate margins, viscoelastic relaxation from distributed faulting in the plate interior, as well as lateral variations in depth-averaged rigidity in the elastic lithosphere. Resulting rigidity variations are consistent with reduced effective elastic plate thickness in a zone a few tens of kilometers wide surrounding the San Andreas fault (SAF) system. Primary deformation characteristics are captured along the entire SAF system, Eastern California Shear Zone, Walker Lane, the Mendocino triple junction, the Cascadia margin, and the plate interior up to ???1000 km from the major plate boundaries.

  8. Extension of non-linear beam models with deformable cross sections

    NASA Astrophysics Data System (ADS)

    Sokolov, I.; Krylov, S.; Harari, I.

    2015-12-01

    Geometrically exact beam theory is extended to allow distortion of the cross section. We present an appropriate set of cross-section basis functions and provide physical insight to the cross-sectional distortion from linear elastostatics. The beam formulation in terms of material (back-rotated) beam internal force resultants and work-conjugate kinematic quantities emerges naturally from the material description of virtual work of constrained finite elasticity. The inclusion of cross-sectional deformation allows straightforward application of three-dimensional constitutive laws in the beam formulation. Beam counterparts of applied loads are expressed in terms of the original three-dimensional data. Special attention is paid to the treatment of the applied stress, keeping in mind applications such as hydrogel actuators under environmental stimuli or devices made of electroactive polymers. Numerical comparisons show the ability of the beam model to reproduce finite elasticity results with good efficiency.

  9. Active deformation in Western Turkey: new GPS observations and models

    NASA Astrophysics Data System (ADS)

    Nocquet, J.; Aktug, B.; Parsons, B.; Cingoz, A.; England, P.; Erkan, Y.; Soyer, N.; Akdeniz, H.; Kilicoglu, A.

    2007-12-01

    How the continents deform remains a matter of debate. One view postulates that continental deforming zones are comprised of a limited numbers of rigid (elastic) microplates. If true, the surface motion can then be described by the relative rotation of blocks, and strain should be localized along the major faults separating the blocks. An alternative view is that the deformation at depth is distributed over wide areas, can be modelled by a viscous flow responding to boundary conditions applied on it and gravitational potential energy gradients related to variations in topography, and the surface strain simply reflects this deformation. Western Turkey is a region of crustal extension, part of the Nubia/Eurasia plate boundary. Its kinematics is often modelled by the relative motion of a small number of rigid blocks (Nyst & Thatcher, 2005, Reilinger et al., 2006). However, until now, the limited number of GPS velocity vectors available has prevented a detailed examination of which is the more appropriate description. We present a new geodetic velocity field including ~100 sites from the longitude the Central Anatolian plateau to the Aegean coast, derived from a combination of campaigns carried out between 1997 and 2006, and continuous GPS operating since 2003, which we use to test the different models. While the kinematics of the area can be correctly modelled by a block model, a good fit to the velocity field requires blocks with sizes smaller than 100 km and still fails to adequately predict the strain rate observed within blocks . Alternatively, we test an approach where the lithosphere is modelled as a thin viscous sheet, responding to the gravitational potentiel energy contrast between the high plateau of eastern Turkey to the east and the subduction along the Hellenic trench in the southwest. The simplistic model has only one free parameter (the force applied by the subducting oceanic lithosphere on the Aegean ), but provides a good agreement with the observed

  10. A geometric graph model for citation networks of exponentially growing scientific papers

    NASA Astrophysics Data System (ADS)

    Xie, Zheng; Ouyang, Zhenzheng; Liu, Qi; Li, Jianping

    2016-08-01

    In citation networks, the content relativity of papers is a precondition of engendering citations, which is hard to model by a topological graph. A geometric graph is proposed to predict some features of the citation networks with exponentially growing papers, which addresses the precondition by using coordinates of nodes to model the research contents of papers, and geometric distances between nodes to diversities of research contents between papers. Citations between modeled papers are drawn according to a geometric rule, which addresses the precondition as well as some other factors engendering citations, namely academic influences of papers, aging of those influences, and incomplete copying of references. Instead of cumulative advantage of degree, the model illustrates that the scale-free property of modeled networks arises from the inhomogeneous academic influences of modeled papers. The model can also reproduce some other statistical features of citation networks, e.g. in- and out-assortativities, which show the model provides a suitable tool to understand some aspects of citation networks by geometry.

  11. Efficient 3D modeling of buildings using a priori geometric object information

    NASA Astrophysics Data System (ADS)

    Van den Heuvel, Frank A.; Vosselman, George

    1997-07-01

    The subject of this paper is the research that aims at efficiency improvement of acquisition of 3D building models from digital images for Computer Aided Architectural Design (CAAD). The results do not only apply to CAAD, but to all applications where polyhedral objects are involved. The research is concentrated on the integration of a priori geometric object information in the modeling process. Parallelism and perpendicularity are examples of the a priori information to be used. This information leads to geometric constraints in the mathematical model. This model can be formulated using condition equations with observations only. The advantage is that the adjustment does not include object parameters and the geometric constraints can be incorporated in the model sequentially. As with the use of observation equations statistical testing can be applied to verify the constraints. For the initial values of orientation parameters of the images we use a direct solution based on a priori object information as well. For this method only two sets of (coplanar) parallel lines in object space are required. The paper concentrates on the mathematical model with image lines as the main type of observations. Advantages as well as disadvantages of a mathematical model with only condition equations are discussed. The parametrization of the object model plays a major role in this discussion.

  12. Integrable higher order deformations of Heisenberg supermagnetic model

    SciTech Connect

    Guo Jiafeng; Yan Zhaowen; Wang Shikun; Wu Ke; Zhao Weizhong

    2009-11-15

    The Heisenberg supermagnet model is an integrable supersymmetric system and has a close relationship with the strong electron correlated Hubbard model. In this paper, we investigate the integrable higher order deformations of Heisenberg supermagnet models with two different constraints: (i) S{sup 2}=3S-2I for S is an element of USPL(2/1)/S(U(2)xU(1)) and (ii) S{sup 2}=S for S is an element of USPL(2/1)/S(L(1/1)xU(1)). In terms of the gauge transformation, their corresponding gauge equivalent counterparts are derived.

  13. Modeling Permanent Deformations of Superelastic and Shape Memory Materials.

    PubMed

    Urbano, Marco Fabrizio; Auricchio, Ferdinando

    2015-06-11

    In this paper we propose a modification of the polycrystalline shape memory alloy constitutive model originally proposed by Souza. By introducing a transformation strain energy with two different hardening coefficients, we are able to take into account the effect of the martensitic transformation of unfavorably oriented grains occurring after the main plateau. By choosing a proper second hardening coefficient, it is possible to reproduce the correct stress strain behavior of the material after the plateau without the need of introducing a much smaller Young modulus for martensite. The proposed modification is introduced in the model comprising permanent deformation effects. Model results for uniaxial stress tests are compared to experimental results showing good agreement.

  14. Random interactions in the geometric collective model and the E(5) potential

    SciTech Connect

    Zhang, Jing-Ye; Zamfir, N. V.; Casten, R. F.; Caprio, M. A.

    2001-07-01

    In a study parallel to one recently carried out for the interacting boson model, the behavior of the geometric collective model (GCM) with (partially restricted) random interactions is studied. In particular, we study the frequency distribution of E(4{sub 1}{sup +})/E(2{sub 1}{sup +}) ratios. In addition, we characterize those GCM potentials giving E(5) spectra and distinguish them from others giving R{sub 4/2}{approx}2.3 but non-E(5) spectra.

  15. Surrogate Modeling of Deformable Joint Contact using Artificial Neural Networks

    PubMed Central

    Eskinazi, Ilan; Fregly, Benjamin J.

    2016-01-01

    Deformable joint contact models can be used to estimate loading conditions for cartilage-cartilage, implant-implant, human-orthotic, and foot-ground interactions. However, contact evaluations are often so expensive computationally that they can be prohibitive for simulations or optimizations requiring thousands or even millions of contact evaluations. To overcome this limitation, we developed a novel surrogate contact modeling method based on artificial neural networks (ANNs). The method uses special sampling techniques to gather input-output data points from an original (slow) contact model in multiple domains of input space, where each domain represents a different physical situation likely to be encountered. For each contact force and torque output by the original contact model, a multi-layer feed-forward ANN is defined, trained, and incorporated into a surrogate contact model. As an evaluation problem, we created an ANN-based surrogate contact model of an artificial tibiofemoral joint using over 75,000 evaluations of a fine-grid elastic foundation (EF) contact model. The surrogate contact model computed contact forces and torques about 1000 times faster than a less accurate coarse grid EF contact model. Furthermore, the surrogate contact model was seven times more accurate than the coarse grid EF contact model within the input domain of a walking motion. For larger input domains, the surrogate contact model showed the expected trend of increasing error with increasing domain size. In addition, the surrogate contact model was able to identify out-of-contact situations with high accuracy. Computational contact models created using our proposed ANN approach may remove an important computational bottleneck from musculoskeletal simulations or optimizations incorporating deformable joint contact models. PMID:26220591

  16. Uses and limitations of statistical and geometrical modeling of nonexponential decay curves in performance spaces

    NASA Astrophysics Data System (ADS)

    Summers, Jason E.; Torres, Rendell R.; Shimizu, Yasushi; Jaffe, J. Christopher

    2002-05-01

    The conditions under which the high-frequency, diffuse-field model of coupled rooms is a valid approximation to geometrical acoustics have been examined by comparison with ray-tracing predictions of decay curves in two and three room systems. Results particular to coupled rooms were noted. Because nonexponential decay shape is sensitive to both decay rates and relative energy densities, corrections to these parameters meaningfully improved the diffuse-field model. Variations in the free-path distribution of each subroom, introduced by coupling, complicated the use of improved decay models. Also, the expected decrease in energy density with distance from the source was found to result in spatial dependence of decay shape for certain coupling geometries. Insights from this study were used in the construction of diffuse-field and geometrical computer models of Bass Hall, a 2056 seat multipurpose auditorium with an acoustically coupled stage house. Preliminary results indicate that high-frequency decay curves in each of the subrooms predicted by geometrical acoustics are well matched to the predictions of diffuse-field models. The use of both models as prediction and design tools is assessed by comparison at high frequencies with measurements made during occupied and unoccupied conditions. [Research supported by the Bass Foundation.

  17. SU-E-J-119: Head-And-Neck Digital Phantoms for Geometric and Dosimetric Uncertainty Evaluation of CT-CBCT Deformable Image Registration

    SciTech Connect

    Shen, Z; Koyfman, S; Xia, P; Bzdusek, K

    2015-06-15

    Purpose: To evaluate geometric and dosimetric uncertainties of CT-CBCT deformable image registration (DIR) algorithms using digital phantoms generated from real patients. Methods: We selected ten H&N cancer patients with adaptive IMRT. For each patient, a planning CT (CT1), a replanning CT (CT2), and a pretreatment CBCT (CBCT1) were used as the basis for digital phantom creation. Manually adjusted meshes were created for selected ROIs (e.g. PTVs, brainstem, spinal cord, mandible, and parotids) on CT1 and CT2. The mesh vertices were input into a thin-plate spline algorithm to generate a reference displacement vector field (DVF). The reference DVF was applied to CBCT1 to create a simulated mid-treatment CBCT (CBCT2). The CT-CBCT digital phantom consisted of CT1 and CBCT2, which were linked by the reference DVF. Three DIR algorithms (Demons, B-Spline, and intensity-based) were applied to these ten digital phantoms. The images, ROIs, and volumetric doses were mapped from CT1 to CBCT2 using the DVFs computed by these three DIRs and compared to those mapped using the reference DVF. Results: The average Dice coefficients for selected ROIs were from 0.83 to 0.94 for Demons, from 0.82 to 0.95 for B-Spline, and from 0.67 to 0.89 for intensity-based DIR. The average Hausdorff distances for selected ROIs were from 2.4 to 6.2 mm for Demons, from 1.8 to 5.9 mm for B-Spline, and from 2.8 to 11.2 mm for intensity-based DIR. The average absolute dose errors for selected ROIs were from 0.7 to 2.1 Gy for Demons, from 0.7 to 2.9 Gy for B- Spline, and from 1.3 to 4.5 Gy for intensity-based DIR. Conclusion: Using clinically realistic CT-CBCT digital phantoms, Demons and B-Spline were shown to have similar geometric and dosimetric uncertainties while intensity-based DIR had the worst uncertainties. CT-CBCT DIR has the potential to provide accurate CBCT-based dose verification for H&N adaptive radiotherapy. Z Shen: None; K Bzdusek: an employee of Philips Healthcare; S Koyfman: None; P Xia

  18. Bond-deformation model for rocksalt-structure compounds

    NASA Astrophysics Data System (ADS)

    Dragoo, A. L.

    1984-03-01

    The bond-deformation model is developed for compounds having the rocksalt structure-namely, the alkali halides and the alkaline-earth oxides. The full set of nearest-neighbor bond-deformation parameters is presented, and the parameters are related to the Lagrangian and internal strains and to the atomic displacements. The next-nearest-neighbor bond-stretching parameters are shown to be reducible to the nearest-neighbor parameters. A variety of central-force and non-central-force interactions is identified in the expansion of the short-range portion of the strain energy. By a transformation of variables the short-range contributions to the dynamical matrix are obtained. Expressions are derived for the elastic constants and for the force constant associated with the homogeneous polarization of the lattice.

  19. Oscillatory athermal quasistatic deformation of a model glass

    NASA Astrophysics Data System (ADS)

    Fiocco, Davide; Foffi, Giuseppe; Sastry, Srikanth

    2013-08-01

    We report computer simulations of oscillatory athermal quasistatic shear deformation of dense amorphous samples of a three-dimensional model glass former. A dynamical transition is observed as the amplitude of the deformation is varied: For large values of the amplitude the system exhibits diffusive behavior and loss of memory of the initial conditions, whereas localization is observed for small amplitudes. Our results suggest that the same kind of transition found in driven colloidal systems is present in the case of amorphous solids (e.g., metallic glasses). The onset of the transition is shown to be related to the onset of energy dissipation. Shear banding is observed for large system sizes, without, however, affecting qualitative aspects of the transition.

  20. Improved techniques for thermomechanical testing in support of deformation modeling

    NASA Technical Reports Server (NTRS)

    Castelli, Michael G.; Ellis, John R.

    1992-01-01

    The feasibility of generating precise thermomechanical deformation data to support constitutive model development was investigated. Here, the requirement is for experimental data that is free from anomalies caused by less than ideal equipment and procedures. A series of exploratory tests conducted on Hastelloy X showed that generally accepted techniques for strain controlled tests were lacking in at least three areas. Specifically, problems were encountered with specimen stability, thermal strain compensation, and temperature/mechanical strain phasing. The source of these difficulties was identified and improved thermomechanical testing techniques to correct them were developed. These goals were achieved by developing improved procedures for measuring and controlling thermal gradients and by designing a specimen specifically for thermomechanical testing. In addition, innovative control strategies were developed to correctly proportion and phase the thermal and mechanical components of strain. Subsequently, the improved techniques were used to generate deformation data for Hastelloy X over the temperature range, 200 to 1000 C.

  1. Region-based geometric modelling of human airways and arterial vessels.

    PubMed

    Ding, Songlin; Ye, Yong; Tu, Jiyuan; Subic, Aleksandar

    2010-03-01

    Anatomically precise geometric models of human airways and arterial vessels play a critical role in the analysis of air and blood flows in human bodies. The established geometric modelling methods become invalid when the model consists of bronchioles or small vessels. This paper presents a new method for reconstructing the entire airway tree and carotid vessels from point clouds obtained from CT or MR images. A novel layer-by-layer searching algorithm has been developed to recognize branches of the airway tree and arterial vessels from the point clouds. Instead of applying uniform accuracy to all branches regardless of the number of available points, the surface patches on each branch are constructed adaptively based on the number of available elemental points, which leads to the elimination of distortions occurring at small bronchi and vessels.

  2. An independent-atom-model description of ion-molecule collisions including geometric screening corrections

    NASA Astrophysics Data System (ADS)

    Lüdde, Hans Jürgen; Achenbach, Alexander; Kalkbrenner, Thilo; Jankowiak, Hans-Christian; Kirchner, Tom

    2016-04-01

    A new model to account for geometric screening corrections in an independent-atom-model description of ion-molecule collisions is introduced. The ion-molecule cross sections for net capture and net ionization are represented as weighted sums of atomic cross sections with weight factors that are determined from a geometric model of overlapping cross section areas. Results are presented for proton collisions with targets ranging from diatomic to complex polyatomic molecules. Significant improvement compared to simple additivity rule results and in general good agreement with experimental data are found. The flexibility of the approach opens up the possibility to study more detailed observables such as orientation-dependent and charge-state-correlated cross sections for a large class of complex targets ranging from biomolecules to atomic clusters.

  3. Geant4.10 simulation of geometric model for metaphase chromosome

    NASA Astrophysics Data System (ADS)

    Rafat-Motavalli, L.; Miri-Hakimabad, H.; Bakhtiyari, E.

    2016-04-01

    In this paper, a geometric model of metaphase chromosome is explained. The model is constructed according to the packing ratio and dimension of the structure from nucleosome up to chromosome. A B-DNA base pair is used to construct 200 base pairs of nucleosomes. Each chromatin fiber loop, which is the unit of repeat, has 49,200 bp. This geometry is entered in Geant4.10 Monte Carlo simulation toolkit and can be extended to the whole metaphase chromosomes and any application in which a DNA geometrical model is needed. The chromosome base pairs, chromosome length, and relative length of chromosomes are calculated. The calculated relative length is compared to the relative length of human chromosomes.

  4. Quasiequilibrium models for triaxially deformed rotating compact stars

    SciTech Connect

    Huang Xing; Markakis, Charalampos; Sugiyama, Noriyuki; Uryu, Koji

    2008-12-15

    Quasiequilibrium models of rapidly rotating triaxially deformed stars are computed in general relativistic gravity, assuming a conformally flat spatial geometry (Isenberg-Wilson-Mathews formulation) and a polytropic equation of state. Highly deformed solutions are calculated on the initial slice covered by spherical coordinate grids, centered at the source, in all angular directions up to a large truncation radius. Constant rest mass sequences are calculated from nearly axisymmetric to maximally deformed triaxial configurations. Selected parameters are to model (proto-) neutron stars; the compactness is M/R=0.001, 0.1, 0.14, and 0.2 for polytropic index n=0.3 and M/R=0.001, 0.1, 0.12, and 0.14 for n=0.5, where M/R refers to that of a nonrotating spherical star having the same rest mass. We confirmed that the triaxial solutions exist for these parameters as in the case of Newtonian polytropes. However, it is also found that the triaxial sequences become shorter for higher compactness, and those disappear at a certain large compactness for the n=0.5 case. In the scenario of the contraction of proto-neutron stars being subject to strong viscosity and rapid cooling, it is plausible that, once the viscosity driven secular instability sets in during the contraction, the proto-neutron stars are always maximally deformed triaxial configurations, as long as the compactness and the equation of state parameters allow such triaxial sequences. Detection of gravitational waves from such sources may be used as another probe for the nuclear equation of state.

  5. Evaluation of Geometrically Nonlinear Reduced Order Models with Nonlinear Normal Modes

    DOE PAGESBeta

    Kuether, Robert J.; Deaner, Brandon J.; Hollkamp, Joseph J.; Allen, Matthew S.

    2015-09-15

    Several reduced-order modeling strategies have been developed to create low-order models of geometrically nonlinear structures from detailed finite element models, allowing one to compute the dynamic response of the structure at a dramatically reduced cost. But, the parameters of these reduced-order models are estimated by applying a series of static loads to the finite element model, and the quality of the reduced-order model can be highly sensitive to the amplitudes of the static load cases used and to the type/number of modes used in the basis. Our paper proposes to combine reduced-order modeling and numerical continuation to estimate the nonlinearmore » normal modes of geometrically nonlinear finite element models. Not only does this make it possible to compute the nonlinear normal modes far more quickly than existing approaches, but the nonlinear normal modes are also shown to be an excellent metric by which the quality of the reduced-order model can be assessed. Hence, the second contribution of this work is to demonstrate how nonlinear normal modes can be used as a metric by which nonlinear reduced-order models can be compared. Moreover, various reduced-order models with hardening nonlinearities are compared for two different structures to demonstrate these concepts: a clamped–clamped beam model, and a more complicated finite element model of an exhaust panel cover.« less

  6. Evaluation of Geometrically Nonlinear Reduced Order Models with Nonlinear Normal Modes

    SciTech Connect

    Kuether, Robert J.; Deaner, Brandon J.; Hollkamp, Joseph J.; Allen, Matthew S.

    2015-09-15

    Several reduced-order modeling strategies have been developed to create low-order models of geometrically nonlinear structures from detailed finite element models, allowing one to compute the dynamic response of the structure at a dramatically reduced cost. But, the parameters of these reduced-order models are estimated by applying a series of static loads to the finite element model, and the quality of the reduced-order model can be highly sensitive to the amplitudes of the static load cases used and to the type/number of modes used in the basis. Our paper proposes to combine reduced-order modeling and numerical continuation to estimate the nonlinear normal modes of geometrically nonlinear finite element models. Not only does this make it possible to compute the nonlinear normal modes far more quickly than existing approaches, but the nonlinear normal modes are also shown to be an excellent metric by which the quality of the reduced-order model can be assessed. Hence, the second contribution of this work is to demonstrate how nonlinear normal modes can be used as a metric by which nonlinear reduced-order models can be compared. Moreover, various reduced-order models with hardening nonlinearities are compared for two different structures to demonstrate these concepts: a clamped–clamped beam model, and a more complicated finite element model of an exhaust panel cover.

  7. Definition of a geometric model for landslide numerical modeling from the integration of multi-source geophysical data.

    NASA Astrophysics Data System (ADS)

    Gance, Julien; Bernardie, Séverine; Grandjean, Gilles; Malet, Jean-Philippe

    2014-05-01

    Landslide hazard can be assessed through numerical hydro-mechanical models. These methods require different input data such as a geometric model, rheological constitutive laws and associated hydro-mechanical parameters, and boundary conditions. The objective of this study is to fill the gap existing between geophysical and engineering communities. This gap prevents the engineering community to use the full information available in geophysical imagery. A landslide geometrical model contains information on the geometry and extent of the different geotechnical units of the landslide, and describes the layering and the discontinuities. It is generally drawn from punctual geotechnical tests, using interpolation, or better, from the combined use of a geotechnical test and the iso-value of geophysical tomographies. In this context, we propose to use a multi-source geophysical data fusion strategy as an aid for the construction of landslide geometric models. Based on a fuzzy logic data fusion method, we propose to use different geophysical tomographies and their associated uncertainty and sensitivity tomograms to design a "probable" geometric model. This strategy is tested on a profile of the Super-Sauze landslide using P-wave velocity, P-wave attenuation and electrical resistivity tomography. We construct a probable model and a true model for numerical modeling. Using basic elastic constitutive laws, we show that the model geometry is sufficiently detailed to simulate the complex surface displacements pattern.

  8. Tangential differential calculus and the finite element modeling of a large deformation elastic membrane problem

    NASA Astrophysics Data System (ADS)

    Hansbo, Peter; Larson, Mats G.; Larsson, Fredrik

    2015-07-01

    We develop a finite element method for a large deformation membrane elasticity problem on meshed curved surfaces using a tangential differential calculus approach that avoids the use of classical differential geometric methods. The method is also applied to form finding problems.

  9. A surface misfit inversion method for brain deformation modeling

    NASA Astrophysics Data System (ADS)

    Liu, Fenghong; Paulsen, Keith D.; Hartov, Alexander; Roberts, David W.

    2007-03-01

    Biomechanical models of brain deformation are useful tools for estimating the shift that occurs during neurosurgical interventions. Incorporation of intra-operative data into the biomechanical model improves the accuracy of the registration between the patient and the image volume. The representer method to solve the adjoint equations (AEM) for data assimilation has been developed. In order to improve the computational efficiency and to process more intraoperative data, we modified the adjoint equation method by changing the way in which intraoperative data is applied. The current formulation is developed around a point-based data-model misfit. Surface based data-model misfit could be a more robust and computationally efficient technique. Our approach is to express the surface misfit as the volume between the measured surface and model predicted surface. An iterative method is used to solve the adjoint equations. The surface misfit criterion is tested in a cortical distension clinical case and compared to the results generated with the prior point-based methodology solved either iteratively or with the representer algorithm. The results show that solving the adjoint equations with an iterative method improves computational efficiency dramatically over the representer approach and that reformulating the minimization criterion in terms of a surface description is even more efficient. Applying intra-operative data in the form of a surface misfit is computationally very efficient and appears promising with respect to its accuracy in estimating brain deformation.

  10. A human supervisory approach to rapid world modeling through the use of geometric primitives

    SciTech Connect

    Luck, J.; Roberts, R.

    1997-08-11

    A three-dimensional world model is crucial for many robot-oriented tasks. The most efficient mapping configuration use geometric primitives to model environments, and are easy to store and process. In the past, modeling techniques have been either fully manual or autonomous. Manual methods are extremely time consuming but also highly accurate and flexible. On the other hand autonomous techniques are fast but inflexible and often inaccurate. The method presented in this paper combines the two thereby yielding a highly efficient, flexible, and accurate tool. Our methods enable a human supervisor to quickly construct a fully defined world model from unfiltered and unsegmented real-world range data.

  11. Fluid-structure interaction modeling of ringsail parachutes with disreefing and modified geometric porosity

    NASA Astrophysics Data System (ADS)

    Takizawa, Kenji; Fritze, Matthew; Montes, Darren; Spielman, Timothy; Tezduyar, Tayfun E.

    2012-12-01

    Fluid-structure interaction (FSI) modeling of parachutes poses a number of computational challenges. These include the lightness of the parachute canopy compared to the air masses involved in the parachute dynamics, in the case of ringsail parachutes the geometric porosity created by the construction of the canopy from "rings" and "sails" with hundreds of "ring gaps" and "sail slits," in the case of parachute clusters the contact between the parachutes, and "disreefing" from one stage to another when the parachute is used in multiple stages. The Team for Advanced Flow Simulation and Modeling (T⋆AFSM) has been successfully addressing these computational challenges with the Stabilized Space-Time FSI (SSTFSI) technique, which was developed and improved over the years by the T⋆AFSM and serves as the core numerical technology, and a number of special techniques developed in conjunction with the SSTFSI technique. The quasi-direct and direct coupling techniques developed by the T⋆AFSM, which are applicable to cases with nonmatching fluid and structure meshes at the interface, yield more robust algorithms for FSI computations where the structure is light. The special technique used in dealing with the geometric complexities of the rings and sails is the homogenized modeling of geometric porosity (HMGP), which was developed and improved in recent years by the T⋆AFSM. The surface-edge-node contact tracking (SENCT) technique was introduced by the T⋆AFSM as a contact algorithm where the objective is to prevent the structural surfaces from coming closer than a minimum distance in an FSI computation. The recently-introduced conservative version of the SENCT technique is more robust and is now an essential technology in the parachute cluster computations carried out by the T⋆AFSM. As an additional computational challenge, the parachute canopy might, by design, have some of its panels and sails removed. In FSI computation of parachutes with such "modified geometric

  12. Hubble space telescope observations and geometric models of compact multipolar planetary nebulae

    SciTech Connect

    Hsia, Chih-Hao; Chau, Wayne; Zhang, Yong; Kwok, Sun E-mail: wwlljj1314@gmail.com E-mail: sunkwok@hku.hk

    2014-05-20

    We report high angular resolution Hubble Space Telescope observations of 10 compact planetary nebulae (PNs). Many interesting internal structures, including multipolar lobes, arcs, two-dimensional rings, tori, and halos, are revealed for the first time. These results suggest that multipolar structures are common among PNs, and these structures develop early in their evolution. From three-dimensional geometric models, we have determined the intrinsic dimensions of the lobes. Assuming the lobes are the result of interactions between later-developed fast winds and previously ejected asymptotic giant branch winds, the geometric structures of these PNs suggest that there are multiple phases of fast winds separated by temporal variations and/or directional changes. A scenario of evolution from lobe-dominated to cavity-dominated stages is presented. The results reported here will provide serious constraints on any dynamical models of PNs.

  13. Hubble Space Telescope Observations and Geometric Models of Compact Multipolar Planetary Nebulae

    NASA Astrophysics Data System (ADS)

    Hsia, Chih-Hao; Chau, Wayne; Zhang, Yong; Kwok, Sun

    2014-05-01

    We report high angular resolution Hubble Space Telescope observations of 10 compact planetary nebulae (PNs). Many interesting internal structures, including multipolar lobes, arcs, two-dimensional rings, tori, and halos, are revealed for the first time. These results suggest that multipolar structures are common among PNs, and these structures develop early in their evolution. From three-dimensional geometric models, we have determined the intrinsic dimensions of the lobes. Assuming the lobes are the result of interactions between later-developed fast winds and previously ejected asymptotic giant branch winds, the geometric structures of these PNs suggest that there are multiple phases of fast winds separated by temporal variations and/or directional changes. A scenario of evolution from lobe-dominated to cavity-dominated stages is presented. The results reported here will provide serious constraints on any dynamical models of PNs.

  14. Simplified versus geometrically accurate models of forefoot anatomy to predict plantar pressures: A finite element study.

    PubMed

    Telfer, Scott; Erdemir, Ahmet; Woodburn, James; Cavanagh, Peter R

    2016-01-25

    Integration of patient-specific biomechanical measurements into the design of therapeutic footwear has been shown to improve clinical outcomes in patients with diabetic foot disease. The addition of numerical simulations intended to optimise intervention design may help to build on these advances, however at present the time and labour required to generate and run personalised models of foot anatomy restrict their routine clinical utility. In this study we developed second-generation personalised simple finite element (FE) models of the forefoot with varying geometric fidelities. Plantar pressure predictions from barefoot, shod, and shod with insole simulations using simplified models were compared to those obtained from CT-based FE models incorporating more detailed representations of bone and tissue geometry. A simplified model including representations of metatarsals based on simple geometric shapes, embedded within a contoured soft tissue block with outer geometry acquired from a 3D surface scan was found to provide pressure predictions closest to the more complex model, with mean differences of 13.3kPa (SD 13.4), 12.52kPa (SD 11.9) and 9.6kPa (SD 9.3) for barefoot, shod, and insole conditions respectively. The simplified model design could be produced in <1h compared to >3h in the case of the more detailed model, and solved on average 24% faster. FE models of the forefoot based on simplified geometric representations of the metatarsal bones and soft tissue surface geometry from 3D surface scans may potentially provide a simulation approach with improved clinical utility, however further validity testing around a range of therapeutic footwear types is required.

  15. Modeling crystal and molecular deformation in regenerated cellulose fibers.

    PubMed

    Eichhorn, Stephen J; Young, Robert J; Davies, Geoffrey R

    2005-01-01

    Experimental deformation micromechanics of regenerated cellulose fibers using Raman spectroscopy have been widely reported. Here we report on computer modeling simulations of Raman band shifts in modes close to the experimentally observed 1095 cm(-1) band, which has previously been shown to shift toward a lower wavenumber upon application of external fiber deformation. A molecular mechanics approach is employed using a previously published model structure of cellulose II. Changing the equilibrium c-spacing of this structure and then performing a minimization routine mimics tensile deformation. Normal-mode analysis is then performed on the minimized structure to predict the Raman-intensive vibrations. By using a dot-product analysis on the predicted eigenvectors it is shown that some Raman active modes close to the 1095 cm(-1) band interchange at certain strain levels. Nevertheless, when this is taken into account it is shown that it is possible to find reasonable agreement between theory and experiment. The effect of the experimentally observed broadening of the Raman bands is discussed in terms of crystalline and amorphous regions of cellulose, and this is compared to the lack of X-ray broadening to explain why discrepancies between theory and experiment are present. A hybrid model structure with a series-parallel arrangement of amorphous and misaligned amorphous-crystalline domains is proposed which is shown to agree with what is observed experimentally. Finally, the theoretical crystal modulus for cellulose II is reported as 98 GPa, which is shown to be in agreement with other studies and with an experimental measurement using synchrotron X-ray diffraction.

  16. Geometric and Hydrodynamic Characteristics of Three-dimensional Saturated Prefractal Porous Media Determined with Lattice Boltzmann Modeling

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fractal and prefractal geometric models have substantial potential of contributing to the analysis of flow and transport in porous media such as soils and reservoir rocks. In this study, geometric and hydrodynamic parameters of saturated 3D mass and pore-solid prefractal porous media were characteri...

  17. Comparison of Three Optical Methods for Measuring Model Deformation

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Fleming, G. A.; Hoppe, J. C.

    2000-01-01

    The objective of this paper is to compare the current state-of-the-art of the following three optical techniques under study by NASA for measuring model deformation in wind tunnels: (1) video photogrammetry, (2) projection moire interferometry, and (3) the commercially available Optotrak system. An objective comparison of these three techniques should enable the selection of the best technique for a particular test undertaken at various NASA facilities. As might be expected, no one technique is best for all applications. The techniques are also not necessarily mutually exclusive and in some cases can be complementary to one another.

  18. A mathematical model for voigt poro-visco-plastic deformation

    NASA Astrophysics Data System (ADS)

    Yang, Xin-She

    2002-03-01

    A mathematical model for poro-visco-plastic compaction and pressure solution in porous sediments has been formulated using the Voigt-type rheological constitutive relation as derived from experimental data. The governing equations reduce to a nonlinear hyperbolic heat conduction equation in the case of slow deformation where permeability is relatively high and the pore fluid pressure is nearly hydrostatic, while travelling wave exists in the opposite limit where overpressuring occurs and the pore fluid pressure is almost quasi-lithostatic. Full numerical simulation using a finite element method agree well with the approximate analytical solutions.

  19. Algebraic approach to the projected deformed oscillator model

    NASA Astrophysics Data System (ADS)

    Asherova, R. M.; Smirnov, Yu. F.; Tolstoy, V. N.; Shustov, A. P.

    1981-03-01

    A new method of calculation in terms of the projected deformed oscillator model is proposed. The method involves expansion of its wave functions in terms of the wave functions of an isotropic oscillator potential. Only overlap integrals between projected wave functions and reduced probabilities B(E2) of E2 transitions are examined. B(E2) values are expressed as a series containing the corresponding values of the Elliott SU(3) scheme. The convergence of these expansions is shown to be fairly good. The expectation values of operators ( QQ) and ( QQQ), which characterize the effective internal non-sphericity and non-axiality of the nucleus, are also calculated and discussed.

  20. Multi-view and 3D deformable part models.

    PubMed

    Pepik, Bojan; Stark, Michael; Gehler, Peter; Schiele, Bernt

    2015-11-01

    As objects are inherently 3D, they have been modeled in 3D in the early days of computer vision. Due to the ambiguities arising from mapping 2D features to 3D models, 3D object representations have been neglected and 2D feature-based models are the predominant paradigm in object detection nowadays. While such models have achieved outstanding bounding box detection performance, they come with limited expressiveness, as they are clearly limited in their capability of reasoning about 3D shape or viewpoints. In this work, we bring the worlds of 3D and 2D object representations closer, by building an object detector which leverages the expressive power of 3D object representations while at the same time can be robustly matched to image evidence. To that end, we gradually extend the successful deformable part model [1] to include viewpoint information and part-level 3D geometry information, resulting in several different models with different level of expressiveness. We end up with a 3D object model, consisting of multiple object parts represented in 3D and a continuous appearance model. We experimentally verify that our models, while providing richer object hypotheses than the 2D object models, provide consistently better joint object localization and viewpoint estimation than the state-of-the-art multi-view and 3D object detectors on various benchmarks (KITTI [2] , 3D object classes [3] , Pascal3D+ [4] , Pascal VOC 2007 [5] , EPFL multi-view cars[6] ). PMID:26440264

  1. Statistical Modeling of CTV Motion and Deformation for IMRT of Early-Stage Rectal Cancer

    SciTech Connect

    Bondar, Luiza; Intven, Martijn; Burbach, J.P. Maarten; Budiarto, Eka; Kleijnen, Jean-Paul; Philippens, Marielle; Asselen, Bram van; Seravalli, Enrica; Reerink, Onne; Raaymakers, Bas

    2014-11-01

    Purpose: To derive and validate a statistical model of motion and deformation for the clinical target volume (CTV) of early-stage rectal cancer patients. Methods and Materials: For 16 patients, 4 to 5 magnetic resonance images (MRI) were acquired before each fraction was administered. The CTV was delineated on each MRI. Using a leave-one-out methodology, we constructed a population-based principal component analysis (PCA) model of the CTV motion and deformation of 15 patients, and we tested the model on the left-out patient. The modeling error was calculated as the amount of the CTV motion-deformation of the left-out-patient that could not be explained by the PCA model. Next, the PCA model was used to construct a PCA target volume (PCA-TV) by accumulating motion-deformations simulated by the model. A PCA planning target volume (PTV) was generated by expanding the PCA-TV by uniform margins. The PCA-PTV was compared with uniform and nonuniform CTV-to-PTV margins. To allow comparison, geometric margins were determined to ensure adequate coverage, and the volume difference between the PTV and the daily CTV (CTV-to-PTV volume) was calculated. Results: The modeling error ranged from 0.9 ± 0.5 to 2.9 ± 2.1 mm, corresponding to a reduction of the CTV motion-deformation between 6% and 60% (average, 23% ± 11%). The reduction correlated with the magnitude of the CTV motion-deformation (P<.001, R=0.66). The PCA-TV and the CTV required 2-mm and 7-mm uniform margins, respectively. The nonuniform CTV-to-PTV margins were 4 mm in the left, right, inferior, superior, and posterior directions and 8 mm in the anterior direction. Compared to uniform and nonuniform CTV-to-PTV margins, the PCA-based PTV significantly decreased (P<.001) the average CTV-to-PTV volume by 128 ± 20 mL (49% ± 4%) and by 35 ± 6 mL (20% ± 3.5%), respectively. Conclusions: The CTV motion-deformation of a new patient can be explained by a population-based PCA model. A PCA model

  2. Modeling of microelectromechanical systems deformable mirror diffraction grating

    NASA Astrophysics Data System (ADS)

    Sirbu, Dan; Pluzhnik, Eugene; Belikov, Ruslan

    2016-07-01

    Model-based wavefront control methods such as electric field conjugation require accurate optical propagation models to create high-contrast regions in the focal plane using deformable mirrors (DMs). Recently, it has been shown that it is possible to exceed the controllable outer-working angle imposed by the Nyquist limit based on the number of actuators by utilizing a diffraction grating. The print-through pattern on MEMS-based DMs formed during the fabrication process creates both an amplitude and a phase diffraction grating that can be used to enable Super-Nyquist wavefront control. Using interferometric measurements of a DM-actuator, we develop a DM-diffraction grating model. We compare the total energy enclosed in the first diffraction order due to the phase, amplitude, and combined phase-amplitude gratings with laboratory measurements.

  3. Modeling Permanent Deformations of Superelastic and Shape Memory Materials

    PubMed Central

    Urbano, Marco Fabrizio; Auricchio, Ferdinando

    2015-01-01

    In this paper we propose a modification of the polycrystalline shape memory alloy constitutive model originally proposed by Souza. By introducing a transformation strain energy with two different hardening coefficients, we are able to take into account the effect of the martensitic transformation of unfavorably oriented grains occurring after the main plateau. By choosing a proper second hardening coefficient, it is possible to reproduce the correct stress strain behavior of the material after the plateau without the need of introducing a much smaller Young modulus for martensite. The proposed modification is introduced in the model comprising permanent deformation effects. Model results for uniaxial stress tests are compared to experimental results showing good agreement. PMID:26110494

  4. A dislocation-based, strain–gradient–plasticity strengthening model for deformation processed metal–metal composites

    SciTech Connect

    Tian, Liang; Russell, Alan; Anderson, Iver

    2014-01-03

    Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. A dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with our experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts the strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.

  5. A dislocation-based, strain–gradient–plasticity strengthening model for deformation processed metal–metal composites

    DOE PAGESBeta

    Tian, Liang; Russell, Alan; Anderson, Iver

    2014-01-03

    Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. A dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with our experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts themore » strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.« less

  6. A dislocation-based, strain–gradient–plasticity strengthening model for deformation processed metal-metal composites

    SciTech Connect

    Tian, Liang; Russell, Alan; Anderson, Iver

    2014-01-03

    Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. In this article, a dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with the experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts the strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.

  7. Multiple unfoldings of orbifold singularities: Engineering geometric analogies to unification

    SciTech Connect

    Bourjaily, Jacob L.

    2009-02-15

    Katz and Vafa [Nucl. Phys. B497, 146 (1997)] showed how charged matter can arise geometrically by the deformation of ADE-type orbifold singularities in type IIa, M-theory, and F-theory compactifications. In this paper we use those same basic ingredients, used there to geometrically engineer specific matter representations, here to deform the compactification manifold itself in a way which naturally compliments many features of unified model building. We realize this idea explicitly by deforming a manifold engineered to give rise to an SU{sub 5} grand unified model into a one giving rise to the standard model. In this framework, the relative local positions of the singularities giving rise to standard model fields are specified in terms of the values of a small number of complex structure moduli which deform the original manifold, greatly reducing the arbitrariness of their relative positions.

  8. Comparison of external damping models in a large deformation problem

    NASA Astrophysics Data System (ADS)

    Lee, Jae Wook; Kim, Hyun Woo; Ku, Hi Chun; Yoo, Wan Suk

    2009-09-01

    In many applications of flexible multibody dynamics, the magnitudes of damping forces are very small in comparison with the elastic and inertial forces. However, these small forces may have a very significant influence on responses near resonant frequencies. The role of damping is to remove the energy of a system by dissipation, and dissipative forces in structures can be the result of either internal or external damping. External damping includes aerodynamic and hydrodynamic drag and dissipation in the supports of structures, and internal damping is usually related to energy dissipation in materials. In large deformation problems, because of the flexibility of very thin structures, external damping is more important. Two types of damping models, proportional damping and quadratic damping, have been widely applied to flexible multibody dynamics. The advantages and weaknesses of the two damping models are considered in this study. To make up for the common drawbacks in these two models, a frequency-dependent generic damping model based on experimental modal analysis is proposed. The proposed damping model leads to a accurate correlation with experimental results because it directly uses the modal parameters of each mode obtained by experiment, and can represent exact high frequency behaviors simultaneously. To define and formulate a large deformation problem, the absolute nodal coordinate formulation (ANCF) was used, and computer simulations with the ANCF were compared to experimental results. Using the proposed experimental method, modal parameters and damping behaviors are extracted until 5th mode, which has a frequency of 89 Hz. It is shown that the common drawbacks of proportional and quadratic damping are complemented by the proposed generic damping model.

  9. Phase field modeling of partially saturated deformable porous media

    NASA Astrophysics Data System (ADS)

    Sciarra, Giulio

    2016-09-01

    A poromechanical model of partially saturated deformable porous media is proposed based on a phase field approach at modeling the behavior of the mixture of liquid water and wet air, which saturates the pore space, the phase field being the saturation (ratio). While the standard retention curve is expected still^ to provide the intrinsic retention properties of the porous skeleton, depending on the porous texture, an enhanced description of surface tension between the wetting (liquid water) and the non-wetting (wet air) fluid, occupying the pore space, is stated considering a regularization of the phase field model based on an additional contribution to the overall free energy depending on the saturation gradient. The aim is to provide a more refined description of surface tension interactions. An enhanced constitutive relation for the capillary pressure is established together with a suitable generalization of Darcy's law, in which the gradient of the capillary pressure is replaced by the gradient of the so-called generalized chemical potential, which also accounts for the "force", associated to the local free energy of the phase field model. A micro-scale heuristic interpretation of the novel constitutive law of capillary pressure is proposed, in order to compare the envisaged model with that one endowed with the concept of average interfacial area. The considered poromechanical model is formulated within the framework of strain gradient theory in order to account for possible effects, at laboratory scale, of the micro-scale hydro-mechanical couplings between highly localized flows (fingering) and localized deformations of the skeleton (fracturing).

  10. Automated 3D Motion Tracking using Gabor Filter Bank, Robust Point Matching, and Deformable Models

    PubMed Central

    Wang, Xiaoxu; Chung, Sohae; Metaxas, Dimitris; Axel, Leon

    2013-01-01

    Tagged Magnetic Resonance Imaging (tagged MRI or tMRI) provides a means of directly and noninvasively displaying the internal motion of the myocardium. Reconstruction of the motion field is needed to quantify important clinical information, e.g., the myocardial strain, and detect regional heart functional loss. In this paper, we present a three-step method for this task. First, we use a Gabor filter bank to detect and locate tag intersections in the image frames, based on local phase analysis. Next, we use an improved version of the Robust Point Matching (RPM) method to sparsely track the motion of the myocardium, by establishing a transformation function and a one-to-one correspondence between grid tag intersections in different image frames. In particular, the RPM helps to minimize the impact on the motion tracking result of: 1) through-plane motion, and 2) relatively large deformation and/or relatively small tag spacing. In the final step, a meshless deformable model is initialized using the transformation function computed by RPM. The model refines the motion tracking and generates a dense displacement map, by deforming under the influence of image information, and is constrained by the displacement magnitude to retain its geometric structure. The 2D displacement maps in short and long axis image planes can be combined to drive a 3D deformable model, using the Moving Least Square method, constrained by the minimization of the residual error at tag intersections. The method has been tested on a numerical phantom, as well as on in vivo heart data from normal volunteers and heart disease patients. The experimental results show that the new method has a good performance on both synthetic and real data. Furthermore, the method has been used in an initial clinical study to assess the differences in myocardial strain distributions between heart disease (left ventricular hypertrophy) patients and the normal control group. The final results show that the proposed method

  11. Analysis of deformable image registration accuracy using computational modeling

    SciTech Connect

    Zhong Hualiang; Kim, Jinkoo; Chetty, Indrin J.

    2010-03-15

    Computer aided modeling of anatomic deformation, allowing various techniques and protocols in radiation therapy to be systematically verified and studied, has become increasingly attractive. In this study the potential issues in deformable image registration (DIR) were analyzed based on two numerical phantoms: One, a synthesized, low intensity gradient prostate image, and the other a lung patient's CT image data set. Each phantom was modeled with region-specific material parameters with its deformation solved using a finite element method. The resultant displacements were used to construct a benchmark to quantify the displacement errors of the Demons and B-Spline-based registrations. The results show that the accuracy of these registration algorithms depends on the chosen parameters, the selection of which is closely associated with the intensity gradients of the underlying images. For the Demons algorithm, both single resolution (SR) and multiresolution (MR) registrations required approximately 300 iterations to reach an accuracy of 1.4 mm mean error in the lung patient's CT image (and 0.7 mm mean error averaged in the lung only). For the low gradient prostate phantom, these algorithms (both SR and MR) required at least 1600 iterations to reduce their mean errors to 2 mm. For the B-Spline algorithms, best performance (mean errors of 1.9 mm for SR and 1.6 mm for MR, respectively) on the low gradient prostate was achieved using five grid nodes in each direction. Adding more grid nodes resulted in larger errors. For the lung patient's CT data set, the B-Spline registrations required ten grid nodes in each direction for highest accuracy (1.4 mm for SR and 1.5 mm for MR). The numbers of iterations or grid nodes required for optimal registrations depended on the intensity gradients of the underlying images. In summary, the performance of the Demons and B-Spline registrations have been quantitatively evaluated using numerical phantoms. The results show that parameter

  12. Linking numerical models of lithospheric deformation and magnetotelluric images

    NASA Astrophysics Data System (ADS)

    Sobolev, S. V.

    2012-12-01

    Efficient modeling of geodynamic processes requires constraints from different fields of geosciences. Frequently used are data on crustal structure and composition and their evolution constrained by seismic, gravity and petrological/geochemical studies. However, links between geodynamic modeling and rapidly developing field of magnetotelluric (MT) studies are still insufficient. I'll consider two recent examples of MT observations and geodynamic modeling demonstrating that joint analyses of thermomechanical models of lithospheric deformation and MT images may be useful to understand geodynamic processes. One set of observations is MT data for San Andreas Fault (SAF) in the region close to the SAFOD Site (Becken et al., 2011) that shows high conductivity anomalies in the mantle, that are interpreted as fluid flow feeding creeping part of SAF south of the SAFOD Site. Interestingly, zones of high conductivity do not coincide with the expected zones of the recent active deformation (SAF), but are located to the west of it. Based on thermomechanical model of the evolution of the SAFS in Central and Northern California during the last 20 Mln. years (Popov et al., 2012), I'll demonstrate that high conductivity anomalies precisely coincide with the expected zones of the highest accumulated shear strain. Possible interpretation of this coincidence is that strong preferred orientation of olivine crystals in the highly deformed mantle shear zone causes high permeability of fluids. Another set of observations is MT data showing high conductivity anomalies in the crust of Tibet (Unsworh et al., 2005, Bai et al., 2010) and Pamirs (Sass et al., 2011) that are often interpreted as an evidence for the widely spread partially molten crust. Using 2D thermomechanical models of the collision between India and Eurasia, I'll demonstrate that such structures in the crust cannot appear without delamination of the mantle lithosphere during tectonic shortening. Internal heating of the

  13. Analytical and numerical modeling of an axisymmetrical electrostatic transducer with interior geometrical discontinuity.

    PubMed

    Honzík, Petr; Podkovskiy, Alexey; Durand, Stéphane; Joly, Nicolas; Bruneau, Michel

    2013-11-01

    The main purpose of the paper is to contribute at presenting an analytical and a numerical modeling which would be relevant for interpreting the couplings between a circular membrane, a peripheral cavity having the same external radius as the membrane, and a thin air gap (with a geometrical discontinuity between them), and then to characterize small scale electrostatic receivers and to propose procedures that could be suitable for fitting adjustable parameters to achieve optimal behavior in terms of sensitivity and bandwidth expected. Therefore, comparison between these theoretical methods and characterization of several shapes is dealt with, which show that the models would be appropriate to address the design of such transducers.

  14. Modelling couplings between reaction, fluid flow and deformation: Kinetics

    NASA Astrophysics Data System (ADS)

    Malvoisin, Benjamin; Podladchikov, Yury Y.; Connolly, James A. D.

    2016-04-01

    Mineral assemblages out of equilibrium are commonly found in metamorphic rocks testifying of the critical role of kinetics for metamorphic reactions. As experimentally determined reaction rates in fluid-saturated systems generally indicate complete reaction in less than several years, i.e. several orders of magnitude faster than field-based estimates, metamorphic reaction kinetics are generally thought to be controlled by transport rather than by processes at the mineral surface. However, some geological processes like earthquakes or slow-slip events have shorter characteristic timescales, and transport processes can be intimately related to mineral surface processes. Therefore, it is important to take into account the kinetics of mineral surface processes for modelling fluid/rock interactions. Here, a model coupling reaction, fluid flow and deformation was improved by introducing a delay in the achievement of equilibrium. The classical formalism for dissolution/precipitation reactions was used to consider the influence of the distance from equilibrium and of temperature on the reaction rate, and a dependence on porosity was introduced to model evolution of reacting surface area during reaction. The fitting of experimental data for three reactions typically occurring in metamorphic systems (serpentine dehydration, muscovite dehydration and calcite decarbonation) indicates a systematic faster kinetics close from equilibrium on the dehydration side than on the hydration side. This effect is amplified through the porosity term in the reaction rate since porosity is formed during dehydration. Numerical modelling indicates that this difference in reaction rate close from equilibrium plays a key role in microtextures formation. The developed model can be used in a wide variety of geological systems where couplings between reaction, deformation and fluid flow have to be considered.

  15. Crystal chemistry of natural and synthetic trioctahedral micas: Exploring the limits of geometric crystal chemical models

    NASA Astrophysics Data System (ADS)

    Mercier, Patrick H. J.

    Seventy-five synthetic powder trioctahedral mica samples (between Mg, Co, Ni, and Fe end members, with different degrees of oxidation, vacancy and Al/Si contents, and including an OH/F substitution series) were studied by room-temperature powder X-ray diffraction. The iron-bearing samples were studied by 57Fe Mossbauer spectroscopy. Subsets of the samples were also characterized by scanning electron microscopy combined with energy dispersive spectroscopy, optical microscopy, X-ray fluorescence spectroscopy, and gas chromatography. Lattice parameters (refined under the 1M stacking polytype, space group C2/m) were determined for all powder samples and iron site populations ([4]Fe 3+, [6]Fe2+, and [6]Fe 2+) were obtained from Mossbauer spectroscopy. The relation (c/a)cosbeta* = 113 was found to hold exactly (within experimental error) for all synthetic powders whereas it does not hold in general for synthetic and natural 1M single-crystals. The above relation is predicted to hold for geometric home-octahedral sheets (having equal M1 and M2 site bond lengths) and not to hold for geometric meso-octahedral sheets (having unequal M1 and M2 site bond lengths). The counter-rotation of the M2 site of 1M single-crystals exactly (within experimental error) follows the geometric meso-octahedral sheet model, which, assuming a uniform octahedral sheet height and site-specific M1 and M2 bond lengths, predicts site-specific flattening angles and a counter-rotation angle for the M2 site which is uniquely determined by the bond length difference between the M1 and M2 sites. A geometric meso-octahedral 2:1 layer silicate was shown to require corrugated tetrahedral sheets composed of bond-distorted tetrahedra. Key geometric meso-octahedral distortions in 1M single-crystals were identified and elucidated: (i) intra-layer top-bottom displacements within a TOT layer; and (ii) a tetrahedral bending angle between the apical bond and the pyramidal base formed by the three basal bonds. Plots

  16. Variable-intercept panel model for deformation zoning of a super-high arch dam.

    PubMed

    Shi, Zhongwen; Gu, Chongshi; Qin, Dong

    2016-01-01

    This study determines dam deformation similarity indexes based on an analysis of deformation zoning features and panel data clustering theory, with comprehensive consideration to the actual deformation law of super-high arch dams and the spatial-temporal features of dam deformation. Measurement methods of these indexes are studied. Based on the established deformation similarity criteria, the principle used to determine the number of dam deformation zones is constructed through entropy weight method. This study proposes the deformation zoning method for super-high arch dams and the implementation steps, analyzes the effect of special influencing factors of different dam zones on the deformation, introduces dummy variables that represent the special effect of dam deformation, and establishes a variable-intercept panel model for deformation zoning of super-high arch dams. Based on different patterns of the special effect in the variable-intercept panel model, two panel analysis models were established to monitor fixed and random effects of dam deformation. Hausman test method of model selection and model effectiveness assessment method are discussed. Finally, the effectiveness of established models is verified through a case study. PMID:27386345

  17. Modeling level structures of odd-odd deformed nuclei

    SciTech Connect

    Hoff, R.W.; Kern, J.; Piepenbring, R.; Boisson, J.P.

    1985-01-15

    A technique for modeling quasiparticle excitation energies and rotational parameters in odd-odd deformed nuclei has been applied to actinide species where new experimental data have been obtained by use of neutron-capture gamma-ray spectroscopy. The input parameters required for the calculation were derived from empirical data on single-particle excitations in neighboring odd-mass nuclei. Calculated configuration-specific values for the Gallagher-Moszkowski splittings were used. Calculated and experimental level structures for /sup 238/Np, /sup 244/Am, and /sup 250/Bk are compared, as well as those for several nuclei in the rare-earch region. The agreement for the actinide species is excellent, with bandhead energies deviating 22 keV and rotational parameters 5%, on the average. Corresponding average deviations for five rare-earth nuclei are 47 keV and 7%. Several applications of this modeling technique are discussed.

  18. Modeling level structures of odd-odd deformed nuclei

    SciTech Connect

    Hoff, R.W.; Kern, J.; Piepenbring, R.; Boisson, J.P.

    1984-09-07

    A technique for modeling quasiparticle excitation energies and rotational parameters in odd-odd deformed nuclei has been applied to actinide species where new experimental data have been obtained by use of neutron-capture gamma-ray spectroscopy. The input parameters required for the calculation were derived from empirical data on single-particle excitations in neighboring odd-mass nuclei. Calculated configuration-specific values for the Gallagher-Moszkowski splittings were used. Calculated and experimental level structures for /sup 238/Np, /sup 244/Am, and /sup 250/Bk are compared, as well as those for several nuclei in the rare-earth region. The agreement for the actinide species is excellent, with bandhead energies deviating 22 keV and rotational parameters 5%, on the average. Corresponding average deviations for five rare-earth nuclei are 47 keV and 7%. Several applications of this modeling technique are discussed. 18 refs., 5 figs., 4 tabs.

  19. A micromechanical model for the deformation behavior of titanium polycrystals

    NASA Astrophysics Data System (ADS)

    Romanova, V.; Balokhonov, R.; Shakhidjanov, V.; Zinovieva, O.

    2015-10-01

    A microstructure-based constitutive model for a polycrystalline titanium alloy is constructed on the basis of anisotropic elasticity and crystal plasticity theory, with allowance made for the prismatic and basal slip systems. A three-dimensional polycrystalline structure consisting of 1600 grains is designed by a step-by-step packing method and introduced explicitly into finite-element calculations. Numerical modeling of uniaxial tension is performed using Abaqus/Explicit. Grains unfavorably oriented to the loading axis are shown to remain elastic, while slip occurs in the neighboring grains. As this takes place, rotational modes of deformation are activated in addition to shear strain (translational) modes, and surface grains with a low ability to yield demonstrate a tendency towards extrusion.

  20. Deformational models of rifting and folding on Venus

    NASA Astrophysics Data System (ADS)

    Banerdt, W. B.; Golombek, M. P.

    1988-05-01

    Features of presumed tectonic origin on Venus are reviewed, and lithospheric strength envelopes are derived based on laboratory measurements of the deformational properties of crustal and subcrustal rocks, extrapolated to conditions appropriate to Venus. Models for rifting and folding are developed that use this lithospheric structure and take into account both brittle and ductile yielding as well as finite elastic strength. For both rifting and folding, structures with characteristic widths and spacings are predicted whose size depends on the thickness of the lithosphere, density contrast, and elastic properties of the layer. Finally, the model predictions are compared with the widths and spacings of observed tectonic features, and it is concluded that they are consistent with a relatively strong mantle layer separated from a thin brittle surface layer by a ductile lower crust. These results allow constraints to be placed on the crustal thickness and thermal gradient on Venus.

  1. A reinforcement learning approach to model interactions between landmarks and geometric cues during spatial learning.

    PubMed

    Sheynikhovich, Denis; Arleo, Angelo

    2010-12-13

    In contrast to predictions derived from the associative learning theory, a number of behavioral studies suggested the absence of competition between geometric cues and landmarks in some experimental paradigms. In parallel to these studies, neurobiological experiments suggested the existence of separate independent memory systems which may not always interact according to classic associative principles. In this paper we attempt to combine these two lines of research by proposing a model of spatial learning that is based on the theory of multiple memory systems. In our model, a place-based locale strategy uses activities of modeled hippocampal place cells to drive navigation to a hidden goal, while a stimulus-response taxon strategy, presumably mediated by the dorso-lateral striatum, learns landmark-approaching behavior. A strategy selection network, proposed to reside in the prefrontal cortex, implements a simple reinforcement learning rule to switch behavioral strategies. The model is used to reproduce the results of a behavioral experiment in which an interaction between a landmark and geometric cues was studied. We show that this model, built on the basis of neurobiological data, can explain the lack of competition between the landmark and geometry, potentiation of geometry learning by the landmark, and blocking. Namely, we propose that the geometry potentiation is a consequence of cooperation between memory systems during learning, while blocking is due to competition between the memory systems during action selection.

  2. Midpoint attractors and species richness: Modelling the interaction between environmental drivers and geometric constraints.

    PubMed

    Colwell, Robert K; Gotelli, Nicholas J; Ashton, Louise A; Beck, Jan; Brehm, Gunnar; Fayle, Tom M; Fiedler, Konrad; Forister, Matthew L; Kessler, Michael; Kitching, Roger L; Klimes, Petr; Kluge, Jürgen; Longino, John T; Maunsell, Sarah C; McCain, Christy M; Moses, Jimmy; Noben, Sarah; Sam, Katerina; Sam, Legi; Shapiro, Arthur M; Wang, Xiangping; Novotny, Vojtech

    2016-09-01

    We introduce a novel framework for conceptualising, quantifying and unifying discordant patterns of species richness along geographical gradients. While not itself explicitly mechanistic, this approach offers a path towards understanding mechanisms. In this study, we focused on the diverse patterns of species richness on mountainsides. We conjectured that elevational range midpoints of species may be drawn towards a single midpoint attractor - a unimodal gradient of environmental favourability. The midpoint attractor interacts with geometric constraints imposed by sea level and the mountaintop to produce taxon-specific patterns of species richness. We developed a Bayesian simulation model to estimate the location and strength of the midpoint attractor from species occurrence data sampled along mountainsides. We also constructed midpoint predictor models to test whether environmental variables could directly account for the observed patterns of species range midpoints. We challenged these models with 16 elevational data sets, comprising 4500 species of insects, vertebrates and plants. The midpoint predictor models generally failed to predict the pattern of species midpoints. In contrast, the midpoint attractor model closely reproduced empirical spatial patterns of species richness and range midpoints. Gradients of environmental favourability, subject to geometric constraints, may parsimoniously account for elevational and other patterns of species richness.

  3. Midpoint attractors and species richness: Modelling the interaction between environmental drivers and geometric constraints.

    PubMed

    Colwell, Robert K; Gotelli, Nicholas J; Ashton, Louise A; Beck, Jan; Brehm, Gunnar; Fayle, Tom M; Fiedler, Konrad; Forister, Matthew L; Kessler, Michael; Kitching, Roger L; Klimes, Petr; Kluge, Jürgen; Longino, John T; Maunsell, Sarah C; McCain, Christy M; Moses, Jimmy; Noben, Sarah; Sam, Katerina; Sam, Legi; Shapiro, Arthur M; Wang, Xiangping; Novotny, Vojtech

    2016-09-01

    We introduce a novel framework for conceptualising, quantifying and unifying discordant patterns of species richness along geographical gradients. While not itself explicitly mechanistic, this approach offers a path towards understanding mechanisms. In this study, we focused on the diverse patterns of species richness on mountainsides. We conjectured that elevational range midpoints of species may be drawn towards a single midpoint attractor - a unimodal gradient of environmental favourability. The midpoint attractor interacts with geometric constraints imposed by sea level and the mountaintop to produce taxon-specific patterns of species richness. We developed a Bayesian simulation model to estimate the location and strength of the midpoint attractor from species occurrence data sampled along mountainsides. We also constructed midpoint predictor models to test whether environmental variables could directly account for the observed patterns of species range midpoints. We challenged these models with 16 elevational data sets, comprising 4500 species of insects, vertebrates and plants. The midpoint predictor models generally failed to predict the pattern of species midpoints. In contrast, the midpoint attractor model closely reproduced empirical spatial patterns of species richness and range midpoints. Gradients of environmental favourability, subject to geometric constraints, may parsimoniously account for elevational and other patterns of species richness. PMID:27358193

  4. Patient-specific Deformation Modelling via Elastography: Application to Image-guided Prostate Interventions.

    PubMed

    Wang, Yi; Ni, Dong; Qin, Jing; Xu, Ming; Xie, Xiaoyan; Heng, Pheng-Ann

    2016-01-01

    Image-guided prostate interventions often require the registration of preoperative magnetic resonance (MR) images to real-time transrectal ultrasound (TRUS) images to provide high-quality guidance. One of the main challenges for registering MR images to TRUS images is how to estimate the TRUS-probe-induced prostate deformation that occurs during TRUS imaging. The combined statistical and biomechanical modeling approach shows promise for the adequate estimation of prostate deformation. However, the right setting of the biomechanical parameters is very crucial for realistic deformation modeling. We propose a patient-specific deformation model equipped with personalized biomechanical parameters obtained from shear wave elastography to reliably predict the prostate deformation during image-guided interventions. Using data acquired from a prostate phantom and twelve patients with suspected prostate cancer, we compared the prostate deformation model with and without patient-specific biomechanical parameters in terms of deformation estimation accuracy. The results show that the patient-specific deformation model possesses favorable model ability, and outperforms the model without patient-specific biomechanical parameters. The employment of the patient-specific biomechanical parameters obtained from elastography for deformation modeling shows promise for providing more precise deformation estimation in applications that use computer-assisted image-guided intervention systems. PMID:27272239

  5. Patient-specific Deformation Modelling via Elastography: Application to Image-guided Prostate Interventions

    PubMed Central

    Wang, Yi; Ni, Dong; Qin, Jing; Xu, Ming; Xie, Xiaoyan; Heng, Pheng-Ann

    2016-01-01

    Image-guided prostate interventions often require the registration of preoperative magnetic resonance (MR) images to real-time transrectal ultrasound (TRUS) images to provide high-quality guidance. One of the main challenges for registering MR images to TRUS images is how to estimate the TRUS-probe-induced prostate deformation that occurs during TRUS imaging. The combined statistical and biomechanical modeling approach shows promise for the adequate estimation of prostate deformation. However, the right setting of the biomechanical parameters is very crucial for realistic deformation modeling. We propose a patient-specific deformation model equipped with personalized biomechanical parameters obtained from shear wave elastography to reliably predict the prostate deformation during image-guided interventions. Using data acquired from a prostate phantom and twelve patients with suspected prostate cancer, we compared the prostate deformation model with and without patient-specific biomechanical parameters in terms of deformation estimation accuracy. The results show that the patient-specific deformation model possesses favorable model ability, and outperforms the model without patient-specific biomechanical parameters. The employment of the patient-specific biomechanical parameters obtained from elastography for deformation modeling shows promise for providing more precise deformation estimation in applications that use computer-assisted image-guided intervention systems. PMID:27272239

  6. A solution to the surface intersection problem. [Boolean functions in geometric modeling

    NASA Technical Reports Server (NTRS)

    Timer, H. G.

    1977-01-01

    An application-independent geometric model within a data base framework should support the use of Boolean operators which allow the user to construct a complex model by appropriately combining a series of simple models. The use of these operators leads to the concept of implicitly and explicitly defined surfaces. With an explicitly defined model, the surface area may be computed by simply summing the surface areas of the bounding surfaces. For an implicitly defined model, the surface area computation must deal with active and inactive regions. Because the surface intersection problem involves four unknowns and its solution is a space curve, the parametric coordinates of each surface must be determined as a function of the arc length. Various subproblems involved in the general intersection problem are discussed, and the mathematical basis for their solution is presented along with a program written in FORTRAN IV for implementation on the IBM 370 TSO system.

  7. Calculating the bidirectional reflectance of natural vegetation covers using Boolean models and geometric optics

    NASA Technical Reports Server (NTRS)

    Strahler, Alan H.; Li, Xiao-Wen; Jupp, David L. B.

    1991-01-01

    The bidirectional radiance or reflectance of a forest or woodland can be modeled using principles of geometric optics and Boolean models for random sets in a three dimensional space. This model may be defined at two levels, the scene includes four components; sunlight and shadowed canopy, and sunlit and shadowed background. The reflectance of the scene is modeled as the sum of the reflectances of the individual components as weighted by their areal proportions in the field of view. At the leaf level, the canopy envelope is an assemblage of leaves, and thus the reflectance is a function of the areal proportions of sunlit and shadowed leaf, and sunlit and shadowed background. Because the proportions of scene components are dependent upon the directions of irradiance and exitance, the model accounts for the hotspot that is well known in leaf and tree canopies.

  8. Model Deformation Measurements of Sonic Boom Models in the NASA Ames 9- by 7-Ft Supersonic Wind Tunnel

    NASA Technical Reports Server (NTRS)

    Schairer, Edward T.; Kushner, Laura K.; Garbeff, Theodore J.; Heineck, James T.

    2015-01-01

    The deformations of two sonic-boom models were measured by stereo photogrammetry during tests in the 9- by 7-Ft Supersonic Wind Tunnel at NASA Ames Research Center. The models were geometrically similar but one was 2.75 times as large as the other. Deformation measurements were made by simultaneously imaging the upper surfaces of the models from two directions by calibrated cameras that were mounted behind windows of the test section. Bending and twist were measured at discrete points using conventional circular targets that had been marked along the leading and trailing edges of the wings and tails. In addition, continuous distributions of bending and twist were measured from ink speckles that had been applied to the upper surfaces of the model. Measurements were made at wind-on (M = 1.6) and wind-off conditions over a range of angles of attack between 2.5 deg. and 5.0 deg. At each condition, model deformation was determined by comparing the wind-off and wind-on coordinates of each measurement point after transforming the coordinates to reference coordinates tied to the model. The necessary transformations were determined by measuring the positions of a set of targets on the rigid center-body of the models whose model-axes coordinates were known. Smoothly varying bending and twist measurements were obtained at all conditions. Bending displacements increased in proportion to the square of the distance to the centerline. Maximum deflection of the wingtip of the larger model was about 5 mm (2% of the semispan) and that of the smaller model was 0.9 mm (1% of the semispan). The change in wing twist due to bending increased in direct proportion to distance from the centerline and reached a (absolute) maximum of about -1? at the highest angle of attack for both models. The measurements easily resolved bending displacements as small as 0.05 mm and bending-induced changes in twist as small as 0.05 deg.

  9. 3D Face modeling using the multi-deformable method.

    PubMed

    Hwang, Jinkyu; Yu, Sunjin; Kim, Joongrock; Lee, Sangyoun

    2012-01-01

    In this paper, we focus on the problem of the accuracy performance of 3D face modeling techniques using corresponding features in multiple views, which is quite sensitive to feature extraction errors. To solve the problem, we adopt a statistical model-based 3D face modeling approach in a mirror system consisting of two mirrors and a camera. The overall procedure of our 3D facial modeling method has two primary steps: 3D facial shape estimation using a multiple 3D face deformable model and texture mapping using seamless cloning that is a type of gradient-domain blending. To evaluate our method's performance, we generate 3D faces of 30 individuals and then carry out two tests: accuracy test and robustness test. Our method shows not only highly accurate 3D face shape results when compared with the ground truth, but also robustness to feature extraction errors. Moreover, 3D face rendering results intuitively show that our method is more robust to feature extraction errors than other 3D face modeling methods. An additional contribution of our method is that a wide range of face textures can be acquired by the mirror system. By using this texture map, we generate realistic 3D face for individuals at the end of the paper. PMID:23201976

  10. 3D Face Modeling Using the Multi-Deformable Method

    PubMed Central

    Hwang, Jinkyu; Yu, Sunjin; Kim, Joongrock; Lee, Sangyoun

    2012-01-01

    In this paper, we focus on the problem of the accuracy performance of 3D face modeling techniques using corresponding features in multiple views, which is quite sensitive to feature extraction errors. To solve the problem, we adopt a statistical model-based 3D face modeling approach in a mirror system consisting of two mirrors and a camera. The overall procedure of our 3D facial modeling method has two primary steps: 3D facial shape estimation using a multiple 3D face deformable model and texture mapping using seamless cloning that is a type of gradient-domain blending. To evaluate our method's performance, we generate 3D faces of 30 individuals and then carry out two tests: accuracy test and robustness test. Our method shows not only highly accurate 3D face shape results when compared with the ground truth, but also robustness to feature extraction errors. Moreover, 3D face rendering results intuitively show that our method is more robust to feature extraction errors than other 3D face modeling methods. An additional contribution of our method is that a wide range of face textures can be acquired by the mirror system. By using this texture map, we generate realistic 3D face for individuals at the end of the paper. PMID:23201976

  11. Poroelastic model for adsorption-induced deformation of biopolymers obtained from molecular simulations.

    PubMed

    Kulasinski, Karol; Guyer, Robert; Derome, Dominique; Carmeliet, Jan

    2015-08-01

    Molecular simulation of adsorption of water molecules in nanoporous amorphous biopolymers, e.g., cellulose, reveals nonlinear swelling and nonlinear mechanical response with the increase in fluid content. These nonlinearities result from hydrogen bond breakage by water molecules. Classical poroelastic models, employing porosity and pore pressure as basic variables for describing the "pore fluid," are not adequate for the description of these systems. There is neither a static geometric structure to which porosity can sensibly be assigned nor arrangements of water molecules that are adequately described by giving them a pressure. We employ molar concentration of water and chemical potential to describe the state of the "pore fluid" and stress-strain as mechanical variables. A thermodynamic description is developed using a model energy function having mechanical, fluid, and fluid-mechanical coupling contributions. The parameters in this model energy are fixed by the output of the initial simulation and validated with the results of further simulation. The poroelastic properties, e.g., swelling and mechanical response, are found to be functions both of the molar concentration of water and the stress. The basic fluid-mechanical coupling coefficient, the swelling coefficient, depends on the molar concentration of water and stress and is interpreted in terms of porosity change and solid matrix deformation. The difference between drained and undrained bulk stiffness is explained as is the dependence of these moduli on concentration and stress.

  12. Geometric Context and Orientation Map Combination for Indoor Corridor Modeling Using a Single Image

    NASA Astrophysics Data System (ADS)

    Baligh Jahromi, Ali; Sohn, Gunho

    2016-06-01

    Since people spend most of their time indoors, their indoor activities and related issues in health, security and energy consumption have to be understood. Hence, gathering and representing spatial information of indoor spaces in form of 3D models become very important. Considering the available data gathering techniques with respect to the sensors cost and data processing time, single images proved to be one of the reliable sources. Many of the current single image based indoor space modeling methods are defining the scene as a single box primitive. This domain-specific knowledge is usually not applicable in various cases where multiple corridors are joined at one scene. Here, we addressed this issue by hypothesizing-verifying multiple box primitives which represents the indoor corridor layout. Middle-level perceptual organization is the foundation of the proposed method, which relies on finding corridor layout boundaries using both detected line segments and virtual rays created by orthogonal vanishing points. Due to the presence of objects, shadows and occlusions, a comprehensive interpretation of the edge relations is often concealed. This necessitates the utilization of virtual rays to create a physically valid layout hypothesis. Many of the former methods used Orientation Map or Geometric Context to evaluate their proposed layout hypotheses. Orientation map is a map that reveals the local belief of region orientations computed from line segments, and in a segmented image geometric context uses color, texture, edge, and vanishing point cues to estimate the likelihood of each possible label for all super-pixels. Here, the created layout hypotheses are evaluated by an objective function which considers the fusion of orientation map and geometric context with respect to the horizontal viewing angle at each image pixel. Finally, the best indoor corridor layout hypothesis which gets the highest score from the scoring function will be selected and converted to a 3D

  13. 3D Finite Element Modelling for the investigation of the cavity effect in extensometric rock-deformation measurements

    NASA Astrophysics Data System (ADS)

    Kis, M.; Detzky, G.; Koppán, A.

    2012-04-01

    phenomenon in general. Authors calculated the deformations of a simple-geometry 3D cavity, which is caused by variable gravity loads. Dependence of the cavity effect on changing of distinct elastic properties in categorized models has been investigated. Authors introduced qualifying parameter fields calculated using the results of the FE modelling (nodal displacements as a model answer for the gravity load), in order to characterize the effect. Modelling results can be used as an estimation not only for the absolute cavity effect rate of the intended arrangement, furthermore the sensitivity of the given system against a particular geometric property. As an application example finite element modelling were carried out in order to estimate the influence of the complicated cavity system surrounding the "Budapest-Matyashegy" Gravity and Geodynamical Observatory of the Eotvos Lorand Geophysical Institute of Hungary.

  14. Morphing of geometric composites via residual swelling.

    PubMed

    Pezzulla, Matteo; Shillig, Steven A; Nardinocchi, Paola; Holmes, Douglas P

    2015-08-01

    Understanding and controlling the shape of thin, soft objects has been the focus of significant research efforts among physicists, biologists, and engineers in the last decade. These studies aim to utilize advanced materials in novel, adaptive ways such as fabricating smart actuators or mimicking living tissues. Here, we present the controlled growth-like morphing of 2D sheets into 3D shapes by preparing geometric composite structures that deform by residual swelling. The morphing of these geometric composites is dictated by both swelling and geometry, with diffusion controlling the swelling-induced actuation, and geometric confinement dictating the structure's deformed shape. Building on a simple mechanical analog, we present an analytical model that quantitatively describes how the Gaussian and mean curvatures of a thin disk are affected by the interplay among geometry, mechanics, and swelling. This model is in excellent agreement with our experiments and numerics. We show that the dynamics of residual swelling is dictated by a competition between two characteristic diffusive length scales governed by geometry. Our results provide the first 2D analog of Timoshenko's classical formula for the thermal bending of bimetallic beams - our generalization explains how the Gaussian curvature of a 2D geometric composite is affected by geometry and elasticity. The understanding conferred by these results suggests that the controlled shaping of geometric composites may provide a simple complement to traditional manufacturing techniques. PMID:26076671

  15. Matching Aerial Images to 3D Building Models Using Context-Based Geometric Hashing.

    PubMed

    Jung, Jaewook; Sohn, Gunho; Bang, Kiin; Wichmann, Andreas; Armenakis, Costas; Kada, Martin

    2016-01-01

    A city is a dynamic entity, which environment is continuously changing over time. Accordingly, its virtual city models also need to be regularly updated to support accurate model-based decisions for various applications, including urban planning, emergency response and autonomous navigation. A concept of continuous city modeling is to progressively reconstruct city models by accommodating their changes recognized in spatio-temporal domain, while preserving unchanged structures. A first critical step for continuous city modeling is to coherently register remotely sensed data taken at different epochs with existing building models. This paper presents a new model-to-image registration method using a context-based geometric hashing (CGH) method to align a single image with existing 3D building models. This model-to-image registration process consists of three steps: (1) feature extraction; (2) similarity measure; and matching, and (3) estimating exterior orientation parameters (EOPs) of a single image. For feature extraction, we propose two types of matching cues: edged corner features representing the saliency of building corner points with associated edges, and contextual relations among the edged corner features within an individual roof. A set of matched corners are found with given proximity measure through geometric hashing, and optimal matches are then finally determined by maximizing the matching cost encoding contextual similarity between matching candidates. Final matched corners are used for adjusting EOPs of the single airborne image by the least square method based on collinearity equations. The result shows that acceptable accuracy of EOPs of a single image can be achievable using the proposed registration approach as an alternative to a labor-intensive manual registration process. PMID:27338410

  16. Matching Aerial Images to 3D Building Models Using Context-Based Geometric Hashing

    PubMed Central

    Jung, Jaewook; Sohn, Gunho; Bang, Kiin; Wichmann, Andreas; Armenakis, Costas; Kada, Martin

    2016-01-01

    A city is a dynamic entity, which environment is continuously changing over time. Accordingly, its virtual city models also need to be regularly updated to support accurate model-based decisions for various applications, including urban planning, emergency response and autonomous navigation. A concept of continuous city modeling is to progressively reconstruct city models by accommodating their changes recognized in spatio-temporal domain, while preserving unchanged structures. A first critical step for continuous city modeling is to coherently register remotely sensed data taken at different epochs with existing building models. This paper presents a new model-to-image registration method using a context-based geometric hashing (CGH) method to align a single image with existing 3D building models. This model-to-image registration process consists of three steps: (1) feature extraction; (2) similarity measure; and matching, and (3) estimating exterior orientation parameters (EOPs) of a single image. For feature extraction, we propose two types of matching cues: edged corner features representing the saliency of building corner points with associated edges, and contextual relations among the edged corner features within an individual roof. A set of matched corners are found with given proximity measure through geometric hashing, and optimal matches are then finally determined by maximizing the matching cost encoding contextual similarity between matching candidates. Final matched corners are used for adjusting EOPs of the single airborne image by the least square method based on collinearity equations. The result shows that acceptable accuracy of EOPs of a single image can be achievable using the proposed registration approach as an alternative to a labor-intensive manual registration process. PMID:27338410

  17. An atomistic geometrical model of the B-DNA configuration for DNA-radiation interaction simulations

    NASA Astrophysics Data System (ADS)

    Bernal, M. A.; Sikansi, D.; Cavalcante, F.; Incerti, S.; Champion, C.; Ivanchenko, V.; Francis, Z.

    2013-12-01

    In this paper, an atomistic geometrical model for the B-DNA configuration is explained. This model accounts for five organization levels of the DNA, up to the 30 nm chromatin fiber. However, fragments of this fiber can be used to construct the whole genome. The algorithm developed in this work is capable to determine which is the closest atom with respect to an arbitrary point in space. It can be used in any application in which a DNA geometrical model is needed, for instance, in investigations related to the effects of ionizing radiations on the human genetic material. Successful consistency checks were carried out to test the proposed model. Catalogue identifier: AEPZ_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEPZ_v1_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 1245 No. of bytes in distributed program, including test data, etc.: 6574 Distribution format: tar.gz Programming language: FORTRAN. Computer: Any. Operating system: Multi-platform. RAM: 2 Gb Classification: 3. Nature of problem: The Monte Carlo method is used to simulate the interaction of ionizing radiation with the human genetic material in order to determine DNA damage yields per unit absorbed dose. To accomplish this task, an algorithm to determine if a given energy deposition lies within a given target is needed. This target can be an atom or any other structure of the genetic material. Solution method: This is a stand-alone subroutine describing an atomic-resolution geometrical model of the B-DNA configuration. It is able to determine the closest atom to an arbitrary point in space. This model accounts for five organization levels of the human genetic material, from the nucleotide pair up to the 30 nm chromatin fiber. This subroutine carries out a series of coordinate transformations

  18. A Geometric Method for Model Reduction of Biochemical Networks with Polynomial Rate Functions.

    PubMed

    Samal, Satya Swarup; Grigoriev, Dima; Fröhlich, Holger; Weber, Andreas; Radulescu, Ovidiu

    2015-12-01

    Model reduction of biochemical networks relies on the knowledge of slow and fast variables. We provide a geometric method, based on the Newton polytope, to identify slow variables of a biochemical network with polynomial rate functions. The gist of the method is the notion of tropical equilibration that provides approximate descriptions of slow invariant manifolds. Compared to extant numerical algorithms such as the intrinsic low-dimensional manifold method, our approach is symbolic and utilizes orders of magnitude instead of precise values of the model parameters. Application of this method to a large collection of biochemical network models supports the idea that the number of dynamical variables in minimal models of cell physiology can be small, in spite of the large number of molecular regulatory actors.

  19. Intermittency in an interacting generalization of the geometric Brownian motion model

    NASA Astrophysics Data System (ADS)

    Kühn, Reimer; Neu, Peter

    2008-08-01

    We propose a minimal interacting generalization of the geometric Brownian motion model, which turns out to be formally equivalent to a model describing the dynamics of networks of analogue neurons. For sufficiently strong interactions, such systems may have many meta-stable states. Transitions between meta-stable states are associated with macroscopic reorganizations of the system, which can be triggered by random external forcing. Such a system will exhibit intermittent dynamics within a large part of its parameter space. We propose market dynamics as a possible application of this model, in which case random external forcing would correspond to the arrival of important information. The emergence of a model of interacting prices of the type considered here can be argued to follow naturally from a general argument based on integrating out all non-price degrees of freedom from the dynamics of a hypothetical complete description of economic dependences.

  20. A simple geometrical model describing shapes of soap films suspended on two rings

    NASA Astrophysics Data System (ADS)

    Herrmann, Felix J.; Kilvington, Charles D.; Wildenberg, Rebekah L.; Camacho, Franco E.; Walecki, Wojciech J.; Walecki, Peter S.; Walecki, Eve S.

    2016-09-01

    We measured and analysed the stability of two types of soap films suspended on two rings using the simple conical frusta-based model, where we use common definition of conical frustum as a portion of a cone that lies between two parallel planes cutting it. Using frusta-based we reproduced very well-known results for catenoid surfaces with and without a central disk. We present for the first time a simple conical frusta based spreadsheet model of the soap surface. This very simple, elementary, geometrical model produces results surprisingly well matching the experimental data and known exact analytical solutions. The experiment and the spreadsheet model can be used as a powerful teaching tool for pre-calculus and geometry students.

  1. β-deformed matrix model and Nekrasov partition function

    NASA Astrophysics Data System (ADS)

    Nishinaka, Takahiro; Rim, Chaiho

    2012-02-01

    We study Penner type matrix models in relation with the Nekrasov partition function of four dimensional mathcal{N} = {2} , SU(2) supersymmetric gauge theories with N F = 2 , 3 and 4. By evaluating the resolvent using the loop equation for general β, we explicitly construct the first half-genus correction to the free energy and demonstrate the result coincides with the corresponding Nekrasov partition function with general Ω-background, including higher instanton contributions after modifying the relation of the Coulomb branch parameter with the filling fraction. Our approach complements the proof using the Selberg integrals directly which is useful to find the contribution in the series of instanton numbers for a given deformation parameter.

  2. Video model deformation system for the National Transonic Facility

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Snow, W. L.; Goad, W. K.

    1983-01-01

    A photogrammetric closed circuit television system to measure model deformation at the National Transonic Facility is described. The photogrammetric approach was chosen because of its inherent rapid data recording of the entire object field. Video cameras are used to acquire data instead of film cameras due to the inaccessibility of cameras which must be housed within the cryogenic, high pressure plenum of this facility. A rudimentary theory section is followed by a description of the video-based system and control measures required to protect cameras from the hostile environment. Preliminary results obtained with the same camera placement as planned for NTF are presented and plans for facility testing with a specially designed test wing are discussed.

  3. Physics-based deformable organisms for medical image analysis

    NASA Astrophysics Data System (ADS)

    Hamarneh, Ghassan; McIntosh, Chris

    2005-04-01

    Previously, "Deformable organisms" were introduced as a novel paradigm for medical image analysis that uses artificial life modelling concepts. Deformable organisms were designed to complement the classical bottom-up deformable models methodologies (geometrical and physical layers), with top-down intelligent deformation control mechanisms (behavioral and cognitive layers). However, a true physical layer was absent and in order to complete medical image segmentation tasks, deformable organisms relied on pure geometry-based shape deformations guided by sensory data, prior structural knowledge, and expert-generated schedules of behaviors. In this paper we introduce the use of physics-based shape deformations within the deformable organisms framework yielding additional robustness by allowing intuitive real-time user guidance and interaction when necessary. We present the results of applying our physics-based deformable organisms, with an underlying dynamic spring-mass mesh model, to segmenting and labelling the corpus callosum in 2D midsagittal magnetic resonance images.

  4. Geometric dimension model of virtual astronaut body for ergonomic analysis of man-machine space system

    NASA Astrophysics Data System (ADS)

    Qianxiang, Zhou

    2012-07-01

    It is very important to clarify the geometric characteristic of human body segment and constitute analysis model for ergonomic design and the application of ergonomic virtual human. The typical anthropometric data of 1122 Chinese men aged 20-35 years were collected using three-dimensional laser scanner for human body. According to the correlation between different parameters, curve fitting were made between seven trunk parameters and ten body parameters with the SPSS 16.0 software. It can be concluded that hip circumference and shoulder breadth are the most important parameters in the models and the two parameters have high correlation with the others parameters of human body. By comparison with the conventional regressive curves, the present regression equation with the seven trunk parameters is more accurate to forecast the geometric dimensions of head, neck, height and the four limbs with high precision. Therefore, it is greatly valuable for ergonomic design and analysis of man-machine system.This result will be very useful to astronaut body model analysis and application.

  5. Matching Aerial Images to 3d Building Models Based on Context-Based Geometric Hashing

    NASA Astrophysics Data System (ADS)

    Jung, J.; Bang, K.; Sohn, G.; Armenakis, C.

    2016-06-01

    In this paper, a new model-to-image framework to automatically align a single airborne image with existing 3D building models using geometric hashing is proposed. As a prerequisite process for various applications such as data fusion, object tracking, change detection and texture mapping, the proposed registration method is used for determining accurate exterior orientation parameters (EOPs) of a single image. This model-to-image matching process consists of three steps: 1) feature extraction, 2) similarity measure and matching, and 3) adjustment of EOPs of a single image. For feature extraction, we proposed two types of matching cues, edged corner points representing the saliency of building corner points with associated edges and contextual relations among the edged corner points within an individual roof. These matching features are extracted from both 3D building and a single airborne image. A set of matched corners are found with given proximity measure through geometric hashing and optimal matches are then finally determined by maximizing the matching cost encoding contextual similarity between matching candidates. Final matched corners are used for adjusting EOPs of the single airborne image by the least square method based on co-linearity equations. The result shows that acceptable accuracy of single image's EOP can be achievable by the proposed registration approach as an alternative to labour-intensive manual registration process.

  6. Representing geometric structures in 3D tomography soil images: Application to pore-space modeling

    NASA Astrophysics Data System (ADS)

    Monga, Olivier; Ndeye Ngom, Fatou; François Delerue, Jean

    2007-09-01

    Only in the last decade have geoscientists started to use 3D computed tomography (CT) images of soil for better understanding and modeling of soil properties. In this paper, we propose one of the first approaches to allow the definition and computation of stable (intrinsic) geometric representations of structures in 3D CT soil images. This addresses the open problem set by the description of volume shapes from discrete traces without any a priori information. The basic concept involves representing the volume shape by a piecewise approximation using simple volume primitives (bowls, cylinders, cones, etc.). This typical representation is assumed to optimize a criterion ensuring its stability. This criterion includes the representation scale, which characterizes the trade-off between the fitting error and the number of patches. We also take into account the preservation of topological properties of the initial shape: the number of connected components, adjacency relationships, etc. We propose an efficient computation method for this piecewise approximation using cylinders or bowls. For cylinders, we use optimal region growing in a valuated adjacency graph that represents the primitives and their adjacency relationships. For bowls, we compute a minimal set of Delaunay spheres recovering the skeleton. Our method is applied to modeling of a coarse pore space extracted from 3D CT soil images. The piecewise bowls approximation gives a geometric formalism corresponding to the intuitive notion of pores and also an efficient way to compute it. This geometric and topological representation of coarse pore space can be used, for instance, to simulate biological activity in soil.

  7. Automated contouring error detection based on supervised geometric attribute distribution models for radiation therapy: A general strategy

    SciTech Connect

    Chen, Hsin-Chen; Tan, Jun; Dolly, Steven; Kavanaugh, James; Harold Li, H.; Altman, Michael; Gay, Hiram; Thorstad, Wade L.; Mutic, Sasa; Li, Hua; Anastasio, Mark A.; Low, Daniel A.

    2015-02-15

    Purpose: One of the most critical steps in radiation therapy treatment is accurate tumor and critical organ-at-risk (OAR) contouring. Both manual and automated contouring processes are prone to errors and to a large degree of inter- and intraobserver variability. These are often due to the limitations of imaging techniques in visualizing human anatomy as well as to inherent anatomical variability among individuals. Physicians/physicists have to reverify all the radiation therapy contours of every patient before using them for treatment planning, which is tedious, laborious, and still not an error-free process. In this study, the authors developed a general strategy based on novel geometric attribute distribution (GAD) models to automatically detect radiation therapy OAR contouring errors and facilitate the current clinical workflow. Methods: Considering the radiation therapy structures’ geometric attributes (centroid, volume, and shape), the spatial relationship of neighboring structures, as well as anatomical similarity of individual contours among patients, the authors established GAD models to characterize the interstructural centroid and volume variations, and the intrastructural shape variations of each individual structure. The GAD models are scalable and deformable, and constrained by their respective principal attribute variations calculated from training sets with verified OAR contours. A new iterative weighted GAD model-fitting algorithm was developed for contouring error detection. Receiver operating characteristic (ROC) analysis was employed in a unique way to optimize the model parameters to satisfy clinical requirements. A total of forty-four head-and-neck patient cases, each of which includes nine critical OAR contours, were utilized to demonstrate the proposed strategy. Twenty-nine out of these forty-four patient cases were utilized to train the inter- and intrastructural GAD models. These training data and the remaining fifteen testing data sets

  8. Elastic deformation effects on aerodynamic characteristics for a high-aspect-ratio supercritical-wing model

    NASA Technical Reports Server (NTRS)

    Watson, J. J.

    1982-01-01

    The results of an investigation of the deformations of a high-aspect-ratio, force/pressure, supercritical-wing model during wind tunnel tests and the effects these deformations have on the wing aerodynamics are presented. A finite element model of the wing was developed, and then, for conditions corresponding to wind tunnel test points, experimental aerodynamic loads and theoretical aerodynamic loads were applied to the finite element model. Comparisons were made between the results of these load conditions for changes in structural deflections and for changes in aerodynamic characteristics. The results show that the deformations are quite small and that the pressure data are not significantly affected by model deformation.

  9. Modeling Step-Strain Relaxation and Cyclic Deformations of Elastomers

    NASA Technical Reports Server (NTRS)

    Johnson, A.R.; Mead, J. L.

    2000-01-01

    Data for step-strain relaxation and cyclic compressive deformations of highly viscous short elastomer cylinders are modeled using a large strain rubber viscoelastic constitutive theory with a rate-independent friction stress term added. In the tests, both small and large amplitude cyclic compressive strains, in the range of 1% to 10%, were superimposed on steady state compressed strains, in the range of 5% to 20%, for frequencies of 1 and 10 Hz. The elastomer cylinders were conditioned prior to each test to soften them. The constants in the viscoclastic-friction constitutive theory are determined by employing a nonlinear least-squares method to fit the analytical stresses for a Maxwell model, which includes friction, to measured relaxation stresses obtained from a 20% step-strain compression test. The simulation of the relaxation data with the nonlinear model is successful at compressive strains of 5%, 10%, 15%, and 20%. Simulations of hysteresis stresses for enforced cyclic compressive strains of 20% +/- 5% are made with the model calibrated by the relaxation data. The predicted hysteresis stresses are lower than the measured stresses.

  10. Directional adaptive deformable models for segmentation with application to 2D and 3D medical images

    NASA Astrophysics Data System (ADS)

    Rougon, Nicolas F.; Preteux, Francoise J.

    1993-09-01

    In this paper, we address the problem of adapting the functions controlling the material properties of 2D snakes, and show how introducing oriented smoothness constraints results in a novel class of active contour models for segmentation which extends standard isotropic inhomogeneous membrane/thin-plate stabilizers. These constraints, expressed as adaptive L2 matrix norms, are defined by two 2nd-order symmetric and positive definite tensors which are invariant with respect to rigid motions in the image plane. These tensors, equivalent to directional adaptive stretching and bending densities, are quadratic with respect to 1st- and 2nd-order derivatives of the image intensity, respectively. A representation theorem specifying their canonical form is established and a geometrical interpretation of their effects if developed. Within this framework, it is shown that, by achieving a directional control of regularization, such non-isotropic constraints consistently relate the differential properties (metric and curvature) of the deformable model with those of the underlying intensity surface, yielding a satisfying preservation of image contour characteristics.

  11. STATISTICAL MECHANICS MODELING OF MESOSCALE DEFORMATION IN METALS

    SciTech Connect

    Anter El-Azab

    2013-04-08

    The research under this project focused on a theoretical and computational modeling of dislocation dynamics of mesoscale deformation of metal single crystals. Specifically, the work aimed to implement a continuum statistical theory of dislocations to understand strain hardening and cell structure formation under monotonic loading. These aspects of crystal deformation are manifestations of the evolution of the underlying dislocation system under mechanical loading. The project had three research tasks: 1) Investigating the statistical characteristics of dislocation systems in deformed crystals. 2) Formulating kinetic equations of dislocations and coupling these kinetics equations and crystal mechanics. 3) Computational solution of coupled crystal mechanics and dislocation kinetics. Comparison of dislocation dynamics predictions with experimental results in the area of statistical properties of dislocations and their field was also a part of the proposed effort. In the first research task, the dislocation dynamics simulation method was used to investigate the spatial, orientation, velocity, and temporal statistics of dynamical dislocation systems, and on the use of the results from this investigation to complete the kinetic description of dislocations. The second task focused on completing the formulation of a kinetic theory of dislocations that respects the discrete nature of crystallographic slip and the physics of dislocation motion and dislocation interaction in the crystal. Part of this effort also targeted the theoretical basis for establishing the connection between discrete and continuum representation of dislocations and the analysis of discrete dislocation simulation results within the continuum framework. This part of the research enables the enrichment of the kinetic description with information representing the discrete dislocation systems behavior. The third task focused on the development of physics-inspired numerical methods of solution of the coupled

  12. Three-dimensional modeling of plastic deformation flow during ECAP

    SciTech Connect

    Budilov, I. N.; Alexandrov, I. V.; Beyerlein, Irene J.; Lukaschuk, Y. V.; Zhernakov, V. S.

    2004-01-01

    Plastic flow during equal-channel angular pressing (ECAP) of a copper billet is analyzed in this paper using three-dimensional finite element. The influence of the outer die radius and friction coefficient on the homogeneity in the accumulated plastic strain distribution is investigated. An increase in either outer radius or friction conditions was found to decrease the size of the steady-state region and increase heterogeneity in the final strain distribution from top to bottom and from side to side. Recent investigations have clearly demonstrated the great potential of the severe plastic deformation (SPD) methods, particularly by means of equal-channel angular pressing (ECAP), for ultra-fine grain refinement in various metals and alloys. One of the biggest challenges faced is the fabrication of larger and larger bulk ECAP samples with a uniform desired microstructure, e.g. equiaxed ultra-fine grains, and hence outstanding mechanical properties characteristic of such SPD materials. The degree of homogeneity depends on a myriad of processing and material variables. Numerical methods, such as finite elements (FE), have been an important tool in simulating the ECAP process and exploring the large ECAP parameter space, such as the pressing route and number of passes, die channel intersection angle, outer radius of the die, friction coefficient, pressing rate, material deformation response, and backpressure, e.g. Studying the effects of several factors simultaneously, however, can potentially lead to ambiguous conclusions about the regularities in the plastic flow, regularities in the material fill status, or the final distributions of accumulated total plastic strain. Thus more systematic studies using FE coupled with theoretical considerations are needed. Also, most of the FE studies found in the literature are two-dimensional analyses, and therefore cannot make conclusions regarding the influence of the confined character of plastic deformation on plastic flow in

  13. Artefact-reduced kinematics measurement using a geometric finger model with mixture-prior particle filtering.

    PubMed

    Chang, Cheung-Wen; Kuo, Li-Chieh; Jou, I-Ming; Su, Fong-Chin; Sun, Yung-Nien

    2013-01-01

    It is challenging to measure the finger's kinematics of underlying bones in vivo. This paper presents a new method of finger kinematics measurement, using a geometric finger model and several markers deliberately stuck on skin surface. Using a multiple-view camera system, the optimal motion parameters of finger model were estimated using the proposed mixture-prior particle filtering. This prior, consisting of model and marker information, avoids generating improper particles for achieving near real-time performance. This method was validated using a planar fluoroscopy system that worked simultaneously with photographic system. Ten male subjects with asymptomatic hands were investigated in experiments. The results showed that the kinematic parameters could be estimated more accurately by the proposed method than by using only markers. There was 20-40% reduction in skin artefacts achieved for finger flexion/extension. Thus, this profile system can be developed as a tool of reliable kinematics measurement with good applicability for hand rehabilitation.

  14. Geometrical properties of avalanches in self-organized critical models of solar flares.

    PubMed

    McIntosh, Scott W; Charbonneau, Paul; Bogdan, Thomas J; Liu, Han-Li; Norman, James P

    2002-04-01

    We investigate the geometrical properties of avalanches in self-organized critical models of solar flares. Traditionally, such models differ from the classical sandpile model in their formulation of stability criteria in terms of the curvature of the nodal field, and belong to a distinct universality class. With a view toward comparing these properties to those inferred from spatially and temporally resolved flare observations, we consider the properties of avalanche peak snapshots, time-integrated avalanches in two and three dimensions, and the two-dimensional projections of the latter. The nature of the relationship between the avalanching volume and its projected area is an issue of particular interest in the solar flare context. Using our simulation results we investigate this relationship, and demonstrate that proper accounting of the fractal nature of avalanches can bring into agreement hitherto discrepant results of observational analyses based on simple, nonfractal geometries for the flaring volume.

  15. Simple models for intermittent deformation and slip avalanches: from crystals to granular materials and earthquakes

    NASA Astrophysics Data System (ADS)

    Dahmen, K.; Ben-Zion, Y.; Uhl, J.

    2011-12-01

    Slowly sheared solid or densely packed granular materials often deform in an intermittent way with slip avalanches. The distribution of sizes follows often a power law over a broad range of sizes. In these cases, universal (i.e. detail-independent) scaling behavior governs the statistics of the slip-avalanches. Under some conditions, there are also "characteristic" statistics associated with enhanced occurrence of system-size events, and long-term mode switching between power law and characteristic behavior. These dynamic regimes can be understood with basic micromechanical model for deformation of solids with only two tuning parameter: weakening and dissipation of elastic stress transfer. For granular materials the packing fraction plays the role of the dissipation parameter and it sets the size of the largest slip avalanche. The model can reproduce observed stress-strain curves, power spectra of acoustic emissions, statistics of slip avalanches, and geometrical properties of slip, with a continuous phase transition from brittle to ductile behavior. Exact universal predictions for the power law exponents of the avalanche size distributions, durations, power spectra of acoustic emissions, and scaling functions are extracted using an analytical mean field theory and renormalization group tools. For granular materials a dynamic phase diagram with solid-like behavior and large slip avalanches at large packing fractions, and fluid-like behavior at lower packing fractions is obtained. The results agree with recent experimental observations and simulations of the statistics of dislocation dynamics in sheared crystals such as ice [1], slip avalanches in sheared granular materials [2], and avalanches in magnetic and fault systems [3,4]. [1] K. A. Dahmen, Y. Ben-Zion, and J.T. Uhl, "A micromechanical model for deformation in solids with universal predictions for stress strain curves and slip avalanches", Physical Review Letters 102, 175501/1-4 (2009). [2] K. A. Dahmen, Y

  16. Capturing spiral radial growth of conifers using the superellipse to model tree-ring geometric shape.

    PubMed

    Shi, Pei-Jian; Huang, Jian-Guo; Hui, Cang; Grissino-Mayer, Henri D; Tardif, Jacques C; Zhai, Li-Hong; Wang, Fu-Sheng; Li, Bai-Lian

    2015-01-01

    Tree-rings are often assumed to approximate a circular shape when estimating forest productivity and carbon dynamics. However, tree rings are rarely, if ever, circular, thereby possibly resulting in under- or over-estimation in forest productivity and carbon sequestration. Given the crucial role played by tree ring data in assessing forest productivity and carbon storage within a context of global change, it is particularly important that mathematical models adequately render cross-sectional area increment derived from tree rings. We modeled the geometric shape of tree rings using the superellipse equation and checked its validation based on the theoretical simulation and six actual cross sections collected from three conifers. We found that the superellipse better describes the geometric shape of tree rings than the circle commonly used. We showed that a spiral growth trend exists on the radial section over time, which might be closely related to spiral grain along the longitudinal axis. The superellipse generally had higher accuracy than the circle in predicting the basal area increment, resulting in an improved estimate for the basal area. The superellipse may allow better assessing forest productivity and carbon storage in terrestrial forest ecosystems. PMID:26528316

  17. Capturing spiral radial growth of conifers using the superellipse to model tree-ring geometric shape

    PubMed Central

    Shi, Pei-Jian; Huang, Jian-Guo; Hui, Cang; Grissino-Mayer, Henri D.; Tardif, Jacques C.; Zhai, Li-Hong; Wang, Fu-Sheng; Li, Bai-Lian

    2015-01-01

    Tree-rings are often assumed to approximate a circular shape when estimating forest productivity and carbon dynamics. However, tree rings are rarely, if ever, circular, thereby possibly resulting in under- or over-estimation in forest productivity and carbon sequestration. Given the crucial role played by tree ring data in assessing forest productivity and carbon storage within a context of global change, it is particularly important that mathematical models adequately render cross-sectional area increment derived from tree rings. We modeled the geometric shape of tree rings using the superellipse equation and checked its validation based on the theoretical simulation and six actual cross sections collected from three conifers. We found that the superellipse better describes the geometric shape of tree rings than the circle commonly used. We showed that a spiral growth trend exists on the radial section over time, which might be closely related to spiral grain along the longitudinal axis. The superellipse generally had higher accuracy than the circle in predicting the basal area increment, resulting in an improved estimate for the basal area. The superellipse may allow better assessing forest productivity and carbon storage in terrestrial forest ecosystems. PMID:26528316

  18. Understanding geometric instabilities in thin films via a multi-layer model.

    PubMed

    Lejeune, Emma; Javili, Ali; Linder, Christian

    2016-01-21

    When a thin stiff film adhered to a compliant substrate is subject to compressive stresses, the film will experience a geometric instability and buckle out of plane. For high film/substrate stiffness ratios with relatively low levels of strain, the primary mode of instability will either be wrinkling or buckling delamination depending on the material and geometric properties of the system. Previous works approach these systems by treating the film and substrate as homogenous layers, either consistently perfectly attached, or perfectly unattached at interfacial flaws. However, this approach neglects systems where the film and substrate are uniformly weakly attached or where interfacial layers due to surface modifications in either the film or substrate are present. Here we demonstrate a method for accounting for these additional thin surface layers via an analytical solution verified by numerical results. The main outcome of this work is an improved understanding of how these layers influence global behavior. We demonstrate the utility of our model with applications ranging from buckling based metrology in ultrathin films, to an improved understanding of the formation of a novel surface in carbon nanotube bio-interface films. Moving forward, this model can be used to interpret experimental results, particularly for systems which deviate from traditional behavior, and aid in the evaluation and design of future film/substrate systems.

  19. Geometric-optics forest canopy modelling for high spatial resolution imagery

    SciTech Connect

    Fournier, R.A., Edwards, G.; Gauthier, R.P.

    1996-11-01

    This research studies processes influencing the radiometric appearance of a forest at fine spatial resolution. A canopy radiance model, Treatment of Radiance Emerging from Light Interactions in a Treed Environment (TRELITE), was formulated using a geometric-optical approach. This model explored the relationship between image radiometric textures and canopy physical parameters. TRELITE`s geometric parameters of influence were tree shape, pixel dimension, source and viewing directions, and forest configuration. TRELITE`s optical parameters and interaction processes were collimated and sky irradiance, surface reflectivity, object transmissivity, and projected and mutual shading. Simulated airborne images were generated from a physical representation of these parameters. Four conifer plantation test sites were chosen to evaluate the influence of the modelled parameters on the scene radiance. The Multispectral Electro-Optical Imaging Scanner (MEIS-II), with 45 cm spatial resolution for eight channels spanning visible to near-infrared, measured scene radiance. MEIS image radiance patterns were analyzed for single trees, in four monospecific stands. The influence on the simulated radiance of the modelled canopy factors in TRELITE were examined, on a single tree basis, to determine relative importance in high spatial resolution imagery. Several modelling options were tested. Among them, the most appropriate tree outline shape was the truncated ellipse. Details of simulated images, particularly those in shaded areas, compared more favorably with airborne images when both collimated and diffuse illumination were modelled. Three processes emerged which were imperative to successful simulation: mutual shading (on-object and between object), bidirectional reflectance, and light transmissivity through crowns. 9 refs., 2 figs., 2 tabs.

  20. Flood inundation mapping uncertainty introduced by topographic data accuracy, geometric configuration and modeling approach

    NASA Astrophysics Data System (ADS)

    Papaioannou, G.; Loukas, Athanasios

    2010-05-01

    Floodplain modeling is a recently new and applied method in river engineering discipline and is essential for prediction of flood hazards. The issue of flood inundation of upland environments with topographically complex floodplains is an understudied subject. In most areas of the U.S.A., the use of topographic information derived from Light Detection and Ranging (LIDAR) has improved the quality of river flood inundation predictions. However, such high quality topographical data are not available in most countries and the necessary information is obtained by topographical survey and/or topographical maps. Furthermore, the optimum dimensionality of hydraulic models, cross-section configuration in one-dimensional (1D) models, mesh resolution in two-dimensional models (2D) and modeling approach is not well studied or documented. All these factors introduce significant uncertainty in the evaluation of the floodplain zoning. This study addresses some of these issues by comparing flood inundation maps developed using different topography, geometric description and modeling approach. The methodology involves use of topographic datasets with different horizontal resolutions, vertical accuracies and bathymetry details. Each topographic dataset is used to create a flood inundation map for different cross-section configurations using 1D (HEC-RAS) model, and different mesh resolutions using 2D models for steady state and unsteady state conditions. Comparison of resulting maps indicates the uncertainty introduced in floodplain modeling by the horizontal resolution and vertical accuracy of topographic data and the different modeling approaches.

  1. Noncyclic geometric quantum computation and preservation of entanglement for a two-qubit Ising model

    NASA Astrophysics Data System (ADS)

    Rangani Jahromi, H.; Amniat-Talab, M.

    2015-10-01

    After presenting an exact analytical solution of time-dependent Schrödinger equation, we study the dynamics of entanglement for a two-qubit Ising model. One of the spin qubits is driven by a static magnetic field applied in the direction of the Ising interaction, while the other is coupled with a rotating magnetic field. We also investigate how the entanglement can be controlled by changing the external parameters. Because of the important role of maximally entangled Bell states in quantum communication, we focus on the generalized Bell states as the initial states of the system. It is found that the entanglement evolution is independent of the initial Bell states. Moreover, we can preserve the initial maximal entanglement by adjusting the angular frequency of the rotating field or controlling the exchange coupling between spin qubits. Besides, our calculation shows that the entanglement dynamics is unaffected by the static magnetic field imposed in the direction of the Ising interaction. This is an interesting result, because, as we shall show below, this driving field can be used to control and manipulate the noncyclic geometric phase without affecting the system entanglement. Besides, the nonadiabatic and noncyclic geometric phase for evolved states of the present system are calculated and described in detail. In order to identify the unusable states for quantum communication, completely deviated from the initial maximally entangled states, we also study the fidelity between the initial Bell state and the evolved state of the system. Interestingly, we find that these unusable states can be detected by geometric quantum computation.

  2. Model Deformation Measurement Technique NASA Langley HSR Experiences

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Wahls, R. A.; Owens, L. R.; Goad, W. K.

    1999-01-01

    Model deformation measurement techniques have been investigated and developed at NASA's Langley Research Center. The current technique is based upon a single video camera photogrammetric determination of two dimensional coordinates of wing targets with a fixed (and known) third dimensional coordinate, namely the spanwise location. Variations of this technique have been used to measure wing twist and bending at a few selected spanwise locations near the wing tip on HSR models at the National Transonic Facility, the Transonic Dynamics Tunnel, and the Unitary Plan Wind Tunnel. Automated measurements have been made at both the Transonic Dynamics Tunnel and at Unitary Plan Wind Tunnel during the past year. Automated measurements were made for the first time at the NTF during the recently completed HSR Reference H Test 78 in early 1996. A major problem in automation for the NTF has been the need for high contrast targets which do not exceed the stringent surface finish requirements. The advantages and limitations (including targeting) of the technique as well as the rationale for selection of this particular technique are discussed. Wing twist examples from the HSR Reference H model are presented to illustrate the run-to-run and test-to-test repeatability of the technique in air mode at the NTF. Examples of wing twist in cryogenic nitrogen mode at the NTF are also presented.

  3. Fluid-Structure interaction modeling in deformable porous arteries

    NASA Astrophysics Data System (ADS)

    Zakerzadeh, Rana; Zunino, Paolo

    2015-11-01

    A computational framework is developed to study the coupling of blood flow in arteries interacting with a poroelastic arterial wall featuring possibly large deformations. Blood is modeled as an incompressible, viscous, Newtonian fluid using the Navier-Stokes equations and the arterial wall consists of a thick material which is modeled as a Biot system that describes the mechanical behavior of a homogeneous and isotropic elastic skeleton, and connecting pores filled with fluid. Discretization via finite element method leads to the system of nonlinear equations and a Newton-Raphson scheme is adopted to solve the resulting nonlinear system through consistent linearization. Moreover, interface conditions are imposed on the discrete level via mortar finite elements or Nitsche's coupling. The discrete linearized coupled FSI system is solved by means of a splitting strategy, which allows solving the Navier-Stokes and Biot equations separately. The numerical results investigate the effects of proroelastic parameters on the pressure wave propagation in arteries, filtration of incompressible fluids through the porous media, and the structure displacement. The fellowship support from the Computational Modeling & Simulation PhD program at University of Pittsburgh for Rana Zakerzadeh is gratefully acknowledged.

  4. Effect of geometrical stress concentrators on the current-induced suppression of the serrated deformation in an aluminum-magnesium AlMg5 alloy

    NASA Astrophysics Data System (ADS)

    Shibkov, A. A.; Zolotov, A. E.; Zheltov, M. A.; Denisov, A. A.; Gasanov, M. F.; Kochegarov, S. S.

    2016-05-01

    The effect of an electric current on the band formation and the serrated deformation of planar specimens made of an aluminum-magnesium AlMg5 alloy and weakened by holes is experimentally studied. It is found that the concentration of elastic stress fields and the self-localized unstable plastic deformation field near a hole decreases the critical strain of appearance of the first stress drop and hinders the currentinduced suppression of band formation and the serrated Portevin-Le Chatelier deformation. These results are shown not to be related to the concentration of Joule heat near a hole.

  5. A multi-organ biomechanical model to analyze prostate deformation due to large deformation of the rectum

    NASA Astrophysics Data System (ADS)

    Brock, Kristy K.; Ménard, Cynthia; Hensel, Jennifer; Jaffray, David A.

    2006-03-01

    Magnetic resonance imaging (MRI) with an endorectal receiver coil (ERC) provides superior visualization of the prostate gland and its surrounding anatomy at the expense of large anatomical deformation. The ability to correct for this deformation is critical to integrate the MR images into the CT-based treatment planning for radiotherapy. The ability to quantify and understand the physiological motion due to large changes in rectal filling can also improve the precision of image-guided procedures. The purpose of this study was to understand the biomechanical relationship between the prostate, rectum, and bladder using a finite element-based multi-organ deformable image registration method, 'Morfeus' developed at our institution. Patients diagnosed with prostate cancer were enrolled in the study. Gold seed markers were implanted in the prostate and MR scans performed with the ERC in place and its surrounding balloon inflated to varying volumes (0-100cc). The prostate, bladder, and rectum were then delineated, converted into finite element models, and assigned appropriate material properties. Morfeus was used to assign surface interfaces between the adjacent organs and deform the bladder and rectum from one position to another, obtaining the position of the prostate through finite element analysis. This approach achieves sub-voxel accuracy of image co-registration in the context of a large ERC deformation, while providing a biomechanical understanding of the multi-organ physiological relationship between the prostate, bladder, and rectum. The development of a deformable registration strategy is essential to integrate the superior information offered in MR images into the treatment planning process.

  6. Packaged Fault Model for Geometric Segmentation of Active Faults Into Earthquake Source Faults

    NASA Astrophysics Data System (ADS)

    Nakata, T.; Kumamoto, T.

    2004-12-01

    In Japan, the empirical formula proposed by Matsuda (1975) mainly based on the length of the historical surface fault ruptures and magnitude, is generally applied to estimate the size of future earthquakes from the extent of existing active faults for seismic hazard assessment. Therefore validity of the active fault length and defining individual segment boundaries where propagating ruptures terminate are essential and crucial to the reliability for the accurate assessments. It is, however, not likely for us to clearly identify the behavioral earthquake segments from observation of surface faulting during the historical period, because most of the active faults have longer recurrence intervals than 1000 years in Japan. Besides uncertainties of the datasets obtained mainly from fault trenching studies are quite large for fault grouping/segmentation. This is why new methods or criteria should be applied for active fault grouping/segmentation, and one of the candidates may be geometric criterion of active faults. Matsuda (1990) used _gfive kilometer_h as a critical distance for grouping and separation of neighboring active faults. On the other hand, Nakata and Goto (1998) proposed the geometric criteria such as (1) branching features of active fault traces and (2) characteristic pattern of vertical-slip distribution along the fault traces as tools to predict rupture length of future earthquakes. The branching during the fault rupture propagation is regarded as an effective energy dissipation process and could result in final rupture termination. With respect to the characteristic pattern of vertical-slip distribution, especially with strike-slip components, the up-thrown sides along the faults are, in general, located on the fault blocks in the direction of relative strike-slip. Applying these new geometric criteria to the high-resolution active fault distribution maps, the fault grouping/segmentation could be more practically conducted. We tested this model

  7. Geometric continuum regularization of quantum field theory

    SciTech Connect

    Halpern, M.B. . Dept. of Physics)

    1989-11-08

    An overview of the continuum regularization program is given. The program is traced from its roots in stochastic quantization, with emphasis on the examples of regularized gauge theory, the regularized general nonlinear sigma model and regularized quantum gravity. In its coordinate-invariant form, the regularization is seen as entirely geometric: only the supermetric on field deformations is regularized, and the prescription provides universal nonperturbative invariant continuum regularization across all quantum field theory. 54 refs.

  8. Geometric verification

    NASA Technical Reports Server (NTRS)

    Grebowsky, G. J.

    1982-01-01

    Present LANDSAT data formats are reviewed to clarify how the geodetic location and registration capabilities were defined for P-tape products and RBV data. Since there is only one geometric model used in the master data processor, geometric location accuracy of P-tape products depends on the absolute accuracy of the model and registration accuracy is determined by the stability of the model. Due primarily to inaccuracies in data provided by the LANDSAT attitude management system, desired accuracies are obtained only by using ground control points and a correlation process. The verification of system performance with regards to geodetic location requires the capability to determine pixel positions of map points in a P-tape array. Verification of registration performance requires the capability to determine pixel positions of common points (not necessarily map points) in 2 or more P-tape arrays for a given world reference system scene. Techniques for registration verification can be more varied and automated since map data are not required. The verification of LACIE extractions is used as an example.

  9. Three-dimensional deformation and stress models of the Death Valley and San Andreas Fault Zones

    NASA Astrophysics Data System (ADS)

    Del Pardo, Cecilia

    Crustal deformation studies of tectonic motions have been the topic of many scientific investigations, as they can provide critical information about how tectonic structures shape and deform the Earth. While crustal deformation studies using observational data alone can provide a great deal of information about how the Earth is presently deforming, it is standard practice to implement mathematical and physics-based models to investigate the underlying causes of deformation in the crust. These models, constrained by geological, geodetic and seismic data, have successfully contributed key constraints of ongoing deformation processes and have provided predictions of past and future tectonic behavior of the Earth. One of the most popular regions of study on Earth is the San Andreas Fault System (SAFS), as it provides an ideal environment for investigating the deformation caused by a major continental transform boundary. Furthermore, the Death Valley Fault Zone (DVFZ) is an ideal area to study large-scale crustal deformation due to its well-exposed features related to progressive extensional deformation. This dissertation presents new information about the deformation, stress accumulation rates, and strain rates taking place in the DVFZ and SAFS using three-dimensional (3-D) crustal deformation models. Chapter 1 provides the background and motivation of the modeling work applied to both fault systems. Chapter 2 provides the results obtained from applying a 3-D semi-analytic viscoelastic model constrained by GPS measurements to explore the kinematics and stress accumulation in the DVFZ. Chapter 3 analyzes the influence of intrusions on the motion and deformation of the DVFZ through a finite difference modeling approach. Chapter 4 explores the strain rate distribution within the SAFS, assuming a dipping fault geometry for its southern segments, utilizing a modified 3-D semi-analytic viscoelastic model. Lastly, Chapter 5 gives a description of the future work that may be

  10. Categorical data model for cylindricity consistent with geometrical product specifications standard system

    NASA Astrophysics Data System (ADS)

    Lu, Wenlong; Liu, Xiaojun; Jiang, Xiangqian; Qi, Qunfen; Scott, Paul

    2010-08-01

    Geometrical Product Specifications is an international standard system regarding standardization of dimensional, tolerancing, surface texture and related metrological principles and practices in the charge of ISO/TC213. Integrated information system is necessary to encapsulate the knowledge in GPS to extend its application in digital manufacturing. Establishing a suitable data structure for GPS data is one of the main works in building the integrated information system. This paper is focused on cylindricity and the main points are as follows: proposes the complete verification operator and the complete drawing indication for cylindricity consistent with GPS standard system; models the inter/intra relationships between the elements of operations involved in cylindricity and integrates them by category theory; solves the storage format and closure of query for the categorical data model by the pull-back structure and functor transform in category theory respectively.

  11. Ion-biomolecule collisions studied within the independent atom model including geometric screening corrections

    NASA Astrophysics Data System (ADS)

    Lüdde, H. J.; Achenbach, A.; Kalkbrenner, T.; Jankowiak, H. C.; Kirchner, T.

    2016-05-01

    A recently introduced model to account for geometric screening corrections in an independent-atom-model description of ion-molecule collisions is applied to proton collisions from amino acids and DNA and RNA nucleobases. The correction coefficients are obtained from using a pixel counting method (PCM) for the exact calculation of the effective cross sectional area that emerges when the molecular cross section is pictured as a structure of (overlapping) atomic cross sections. This structure varies with the relative orientation of the molecule with respect to the projectile beam direction and, accordingly, orientation-independent total cross sections are obtained from averaging the pixel count over many orientations. We present net capture and net ionization cross sections over wide ranges of impact energy and analyze the strength of the screening effect by comparing the PCM results with Bragg additivity rule cross sections and with experimental data where available. Work supported by NSERC, Canada.

  12. Mean-field dynamic criticality and geometric transition in the Gaussian core model

    NASA Astrophysics Data System (ADS)

    Coslovich, Daniele; Ikeda, Atsushi; Miyazaki, Kunimasa

    2016-04-01

    We use molecular dynamics simulations to investigate dynamic heterogeneities and the potential energy landscape of the Gaussian core model (GCM). Despite the nearly Gaussian statistics of particles' displacements, the GCM exhibits giant dynamic heterogeneities close to the dynamic transition temperature. The divergence of the four-point susceptibility is quantitatively well described by the inhomogeneous version of the mode-coupling theory. Furthermore, the potential energy landscape of the GCM is characterized by large energy barriers, as expected from the lack of activated, hopping dynamics, and display features compatible with a geometric transition. These observations demonstrate that all major features of mean-field dynamic criticality can be observed in a physically sound, three-dimensional model.

  13. Mean-field dynamic criticality and geometric transition in the Gaussian core model.

    PubMed

    Coslovich, Daniele; Ikeda, Atsushi; Miyazaki, Kunimasa

    2016-04-01

    We use molecular dynamics simulations to investigate dynamic heterogeneities and the potential energy landscape of the Gaussian core model (GCM). Despite the nearly Gaussian statistics of particles' displacements, the GCM exhibits giant dynamic heterogeneities close to the dynamic transition temperature. The divergence of the four-point susceptibility is quantitatively well described by the inhomogeneous version of the mode-coupling theory. Furthermore, the potential energy landscape of the GCM is characterized by large energy barriers, as expected from the lack of activated, hopping dynamics, and display features compatible with a geometric transition. These observations demonstrate that all major features of mean-field dynamic criticality can be observed in a physically sound, three-dimensional model. PMID:27176347

  14. A Method for Lung Boundary Correction Using Split Bregman Method and Geometric Active Contour Model

    PubMed Central

    Zhang, Jianxun; Liang, Rui

    2015-01-01

    In order to get the extracted lung region from CT images more accurately, a model that contains lung region extraction and edge boundary correction is proposed. Firstly, a new edge detection function is presented with the help of the classic structure tensor theory. Secondly, the initial lung mask is automatically extracted by an improved active contour model which combines the global intensity information, local intensity information, the new edge information, and an adaptive weight. It is worth noting that the objective function of the improved model is converted to a convex model, which makes the proposed model get the global minimum. Then, the central airway was excluded according to the spatial context messages and the position relationship between every segmented region and the rib. Thirdly, a mesh and the fractal theory are used to detect the boundary that surrounds the juxtapleural nodule. Finally, the geometric active contour model is employed to correct the detected boundary and reinclude juxtapleural nodules. We also evaluated the performance of the proposed segmentation and correction model by comparing with their popular counterparts. Efficient computing capability and robustness property prove that our model can correct the lung boundary reliably and reproducibly. PMID:26089976

  15. A Method for Lung Boundary Correction Using Split Bregman Method and Geometric Active Contour Model.

    PubMed

    Feng, Changli; Zhang, Jianxun; Liang, Rui

    2015-01-01

    In order to get the extracted lung region from CT images more accurately, a model that contains lung region extraction and edge boundary correction is proposed. Firstly, a new edge detection function is presented with the help of the classic structure tensor theory. Secondly, the initial lung mask is automatically extracted by an improved active contour model which combines the global intensity information, local intensity information, the new edge information, and an adaptive weight. It is worth noting that the objective function of the improved model is converted to a convex model, which makes the proposed model get the global minimum. Then, the central airway was excluded according to the spatial context messages and the position relationship between every segmented region and the rib. Thirdly, a mesh and the fractal theory are used to detect the boundary that surrounds the juxtapleural nodule. Finally, the geometric active contour model is employed to correct the detected boundary and reinclude juxtapleural nodules. We also evaluated the performance of the proposed segmentation and correction model by comparing with their popular counterparts. Efficient computing capability and robustness property prove that our model can correct the lung boundary reliably and reproducibly. PMID:26089976

  16. Modeling Geometric-Temporal Context With Directional Pyramid Co-Occurrence for Action Recognition.

    PubMed

    Yuan, Chunfeng; Li, Xi; Hu, Weiming; Ling, Haibin; Maybank, Stephen J

    2014-02-01

    In this paper, we present a new geometric-temporal representation for visual action recognition based on local spatio-temporal features. First, we propose a modified covariance descriptor under the log-Euclidean Riemannian metric to represent the spatio-temporal cuboids detected in the video sequences. Compared with previously proposed covariance descriptors, our descriptor can be measured and clustered in Euclidian space. Second, to capture the geometric-temporal contextual information, we construct a directional pyramid co-occurrence matrix (DPCM) to describe the spatio-temporal distribution of the vector-quantized local feature descriptors extracted from a video. DPCM characterizes the co-occurrence statistics of local features as well as the spatio-temporal positional relationships among the concurrent features. These statistics provide strong descriptive power for action recognition. To use DPCM for action recognition, we propose a directional pyramid co-occurrence matching kernel to measure the similarity of videos. The proposed method achieves the state-of-the-art performance and improves on the recognition performance of the bag-of-visual-words (BOVWs) models by a large margin on six public data sets. For example, on the KTH data set, it achieves 98.78% accuracy while the BOVW approach only achieves 88.06%. On both Weizmann and UCF CIL data sets, the highest possible accuracy of 100% is achieved. PMID:26270910

  17. Morphometric evaluations of personalised 3D reconstructions and geometric models of the human spine.

    PubMed

    Aubin, C E; Dansereau, J; Parent, F; Labelle, H; de Guise, J A

    1997-11-01

    In the past, several techniques have been developed to study and analyse the 3D characteristics of the human spine: multi-view radiographic or biplanar 3D reconstructions, CT-scan 3D reconstructions and geometric models. Extensive evaluations of three of these techniques that are routinely used at Sainte-Justine Hospital (Montréal, Canada) are presented. The accuracy of these methods is assessed by comparing them with precise measurements made with a coordinate measuring machine on 17 thoracic and lumbar vertebrae (T1-L5) extracted from a normal cadaveric spine specimen. Multi-view radiographic 3D reconstructions are evaluated for different combinations of X-ray views: lateral (LAT), postero-anterior with normal incidence (PA0 degree) and postero-anterior with 20 degrees angled down incidence (PA20 degrees). The following accuracies are found for these reconstructions obtained from different radiographic setups: 2.1 +/- 1.5 mm for the combination with PA0 degree-LAT views, and 5.6 +/- 4.5 mm for the PA0 degree-PA20 degrees stereopair. Higher errors are found in the postero-anterior direction, especially for the PA0 degree-PA20 degrees view combination. Pedicles are found to be the most precise landmarks. Accuracy for CT-scan 3D reconstructions is about 1.1 +/- 0.8 mm. As for a geometric model built using a multiview radiographic reconstruction based on six landmarks per vertebra, accuracies of about 2.6 +/- 2.4 mm for landmarks and 2.3 +/- 2.0 mm for morphometric parameters are found. The geometric model and 3D reconstruction techniques give accurate information, at low X-ray dose. The accuracy assessment of the techniques used to study the 3D characteristics of the human spine is important, because it allows better and more efficient quantitative evaluations of spinal dysfunctions and their treatments, as well as biomechanical modeling of the spine. PMID:9538536

  18. Improved quality prediction model for multistage machining process based on geometric constraint equation

    NASA Astrophysics Data System (ADS)

    Zhu, Limin; He, Gaiyun; Song, Zhanjie

    2016-03-01

    Product variation reduction is critical to improve process efficiency and product quality, especially for multistage machining process (MMP). However, due to the variation accumulation and propagation, it becomes quite difficult to predict and reduce product variation for MMP. While the method of statistical process control can be used to control product quality, it is used mainly to monitor the process change rather than to analyze the cause of product variation. In this paper, based on a differential description of the contact kinematics of locators and part surfaces, and the geometric constraints equation defined by the locating scheme, an improved analytical variation propagation model for MMP is presented. In which the influence of both locator position and machining error on part quality is considered while, in traditional model, it usually focuses on datum error and fixture error. Coordinate transformation theory is used to reflect the generation and transmission laws of error in the establishment of the model. The concept of deviation matrix is heavily applied to establish an explicit mapping between the geometric deviation of part and the process error sources. In each machining stage, the part deviation is formulized as three separated components corresponding to three different kinds of error sources, which can be further applied to fault identification and design optimization for complicated machining process. An example part for MMP is given out to validate the effectiveness of the methodology. The experiment results show that the model prediction and the actual measurement match well. This paper provides a method to predict part deviation under the influence of fixture error, datum error and machining error, and it enriches the way of quality prediction for MMP.

  19. Numerical modeling on progressive internal deformation in down-built diapirs

    NASA Astrophysics Data System (ADS)

    Fuchs, Lukas; Koyi, Hemin; Schmeling, Harro

    2014-09-01

    A two-dimensional finite difference code (FDCON) is used to estimate the finite deformation within a down-built diapir. The geometry of the down-built diapir is fixed by using two rigid rectangular overburden units which sink into a source layer of a constant viscosity. Thus, the model refers to diapirs consisting of a source layer feeding a vertical stem, and not to other salt structures (e.g. salt sheets or pillows). With this setup we study the progressive strain in three different deformation regimes within the “salt” material: (I) a squeezed channel-flow deformation regime and (II) a corner-flow deformation regime within the source layer, and (III) a pure channel-flow deformation regime within the stem. We analyze the evolution of finite deformation in each regime individually, progressive strain for particles passing all three regimes, and total 2D finite deformation within the salt layer. Model results show that the material which enters the stem bears inherited strain accumulated from the other two domains. Therefore, finite deformation in the stem differs from the expected channel-flow deformation, due to the deformation accumulated within the source layer. The stem displays a high deformation zone within its center and areas of decreasing progressive strain between its center and its boundaries. High deformation zones within the stem could also be observed within natural diapirs (e.g. Klodowa, Polen). The location and structure of the high deformation zone (e.g. symmetric or asymmetric) could reveal information about different rates of salt supplies from the source layer. Thus, deformation pattern could directly be correlated to the evolution of the diapir.

  20. Unsupervised 4D myocardium segmentation with a Markov Random Field based deformable model.

    PubMed

    Cordero-Grande, L; Vegas-Sánchez-Ferrero, G; Casaseca-de-la-Higuera, P; San-Román-Calvar, J Alberto; Revilla-Orodea, Ana; Martín-Fernández, M; Alberola-López, C

    2011-06-01

    A stochastic deformable model is proposed for the segmentation of the myocardium in Magnetic Resonance Imaging. The segmentation is posed as a probabilistic optimization problem in which the optimal time-dependent surface is obtained for the myocardium of the heart in a discrete space of locations built upon simple geometric assumptions. For this purpose, first, the left ventricle is detected by a set of image analysis tools gathered from the literature. Then, the segmentation solution is obtained by the Maximization of the Posterior Marginals for the myocardium location in a Markov Random Field framework which optimally integrates temporal-spatial smoothness with intensity and gradient related features in an unsupervised way by the Maximum Likelihood estimation of the parameters of the field. This scheme provides a flexible and robust segmentation method which has been able to generate results comparable to manually segmented images for some derived cardiac function parameters in a set of 43 patients affected in different degrees by an Acute Myocardial Infarction.

  1. Numerical Modeling of Ti Deformation for the Development of a Titanium and Stainless Steel Transition Joint

    NASA Astrophysics Data System (ADS)

    Mukherjee, A. B.; Kapoor, R.; Thota, M. K.; Chakravartty, J. K.

    2016-07-01

    Finite element analysis (FEA) was used to model the joining of titanium grade 2 (Ti) to AISI 321 stainless steel (SS) transition joint of lap configuration with grooves at the interface on SS side. The hot forming of Ti for filling the grooves without defects was simulated. FEA involving large plastic flow with sticking friction condition was initially validated using compression test on cylindrical specimen at 900 °C. The barreled shape and a no-deformation zone in the sample predicted by FEA matched with those of the compression experiments. For the joining process, FEA computed the distribution of strain and hydrostatic stress in Ti and the minimum ram load required for a defect-free joint. The hot forming parameters for Ti to fill the grooves without defects and any geometrical distortion of the die were found to be 0.001 s-1 at 900 °C. Using these conditions a defect-free Ti-SS joint was experimentally produced.

  2. Geometric entanglement and quantum phase transitions in two-dimensional quantum lattice models

    NASA Astrophysics Data System (ADS)

    Shi, Qian-Qian; Wang, Hong-Lei; Li, Sheng-Hao; Cho, Sam Young; Batchelor, Murray T.; Zhou, Huan-Qiang

    2016-06-01

    Geometric entanglement (GE), as a measure of multipartite entanglement, has been investigated as a universal tool to detect phase transitions in quantum many-body lattice models. In this paper we outline a systematic method to compute GE for two-dimensional (2D) quantum many-body lattice models based on the translational invariant structure of infinite projected entangled pair state (iPEPS) representations. By employing this method, the q -state quantum Potts model on the square lattice with q ∈{2 ,3 ,4 ,5 } is investigated as a prototypical example. Further, we have explored three 2D Heisenberg models: the antiferromagnetic spin-1/2 X X X and anisotropic X Y X models in an external magnetic field, and the antiferromagnetic spin-1 X X Z model. We find that continuous GE does not guarantee a continuous phase transition across a phase transition point. We observe and thus classify three different types of continuous GE across a phase transition point: (i) GE is continuous with maximum value at the transition point and the phase transition is continuous, (ii) GE is continuous with maximum value at the transition point but the phase transition is discontinuous, and (iii) GE is continuous with nonmaximum value at the transition point and the phase transition is continuous. For the models under consideration, we find that the second and the third types are related to a point of dual symmetry and a fully polarized phase, respectively.

  3. Towards Automatic Validation and Healing of Citygml Models for Geometric and Semantic Consistency

    NASA Astrophysics Data System (ADS)

    Alam, N.; Wagner, D.; Wewetzer, M.; von Falkenhausen, J.; Coors, V.; Pries, M.

    2013-09-01

    A steadily growing number of application fields for large 3D city models have emerged in recent years. Like in many other domains, data quality is recognized as a key factor for successful business. Quality management is mandatory in the production chain nowadays. Automated domain-specific tools are widely used for validation of business-critical data but still common standards defining correct geometric modeling are not precise enough to define a sound base for data validation of 3D city models. Although the workflow for 3D city models is well-established from data acquisition to processing, analysis and visualization, quality management is not yet a standard during this workflow. Processing data sets with unclear specification leads to erroneous results and application defects. We show that this problem persists even if data are standard compliant. Validation results of real-world city models are presented to demonstrate the potential of the approach. A tool to repair the errors detected during the validation process is under development; first results are presented and discussed. The goal is to heal defects of the models automatically and export a corrected CityGML model.

  4. High Strain Rate Deformation Modeling of a Polymer Matrix Composite. Part 2; Composite Micromechanical Model

    NASA Technical Reports Server (NTRS)

    Goldberg, Robert K.; Stouffer, Donald C.

    1998-01-01

    Recently applications have exposed polymer matrix composite materials to very high strain rate loading conditions, requiring an ability to understand and predict the material behavior under these extreme conditions. In this second paper of a two part report, a three-dimensional composite micromechanical model is described which allows for the analysis of the rate dependent, nonlinear deformation response of a polymer matrix composite. Strain rate dependent inelastic constitutive equations utilized to model the deformation response of a polymer are implemented within the micromechanics method. The deformation response of two representative laminated carbon fiber reinforced composite materials with varying fiber orientation has been predicted using the described technique. The predicted results compare favorably to both experimental values and the response predicted by the Generalized Method of Cells, a well-established micromechanics analysis method.

  5. Deformation-induced damage and recovery in model hydrogels - A molecular dynamics simulation

    NASA Astrophysics Data System (ADS)

    Zidek, Jan; Milchev, Andrey; Jancar, Josef; Vilgis, Thomas A.

    2016-09-01

    Using molecular dynamics simulation of a model hybrid cross-link hydrogel, we investigate the network damage evolution and the related structure transformations. We model the hydrogel structure as a network-connected assembly of crosslinked clusters whereby deformation-induced damage is considered along with network recovery. The two principal mechanisms involved in hydrogel recovery from deformation include segment hops of the building structure units (segments) between clusters and cluster shape modification. These mechanisms act either instantaneously, or with a certain time delay after the onset of deformation. By elucidating the conditions under which one of the mechanisms prevails, one may design hydrogel materials with a desired response to deformation.

  6. HERMES: A Model to Describe Deformation, Burning, Explosion, and Detonation

    SciTech Connect

    Reaugh, J E

    2011-11-22

    performance, whether as a result of accident, hazard, or a fault in the detonation train. These models describe the build-up of detonation from a shock stimulus. They are generally consistent with the mesoscale picture of ignition at many small defects in the plane of the shock front and the growth of the resulting hot-spots, leading to detonation in heterogeneous explosives such as plastic-bonded explosives (PBX). The models included terms for ignition, and also for the growth of reaction as tracked by the local mass fraction of product gas, {lambda}. The growth of reaction in such models incorporates a form factor that describes the change of surface area per unit volume (specific surface area) as the reaction progresses. For unimolecular crystalline-based explosives, the form factor is consistent with the mesoscale picture of a galaxy of hot spots burning outward and eventually interacting with each other. For composite explosives and propellants, where the fuel and oxidizer are segregated, the diffusion flame at the fuel-oxidizer interface can be interpreted with a different form factor that corresponds to grains burning inward from their surfaces. The form factor influences the energy release rate, and the amount of energy released in the reaction zone. Since the 19th century, gun and cannon propellants have used perforated geometric shapes that produce an increasing surface area as the propellant burns. This helps maintain the pressure as burning continues while the projectile travels down the barrel, which thereby increases the volume of the hot gas. Interior ballistics calculations use a geometric form factor to describe the changing surface area precisely. As a result, with a suitably modified form factor, detonation models can represent burning and explosion in damaged and broken reactant. The disadvantage of such models in application to accidents is that the ignition term does not distinguish between a value of pressure that results from a shock, and the same

  7. A geometrical model for the Monte Carlo simulation of the TrueBeam linac

    NASA Astrophysics Data System (ADS)

    Rodriguez, M.; Sempau, J.; Fogliata, A.; Cozzi, L.; Sauerwein, W.; Brualla, L.

    2015-06-01

    Monte Carlo simulation of linear accelerators (linacs) depends on the accurate geometrical description of the linac head. The geometry of the Varian TrueBeam linac is not available to researchers. Instead, the company distributes phase-space files of the flattening-filter-free (FFF) beams tallied at a plane located just upstream of the jaws. Yet, Monte Carlo simulations based on third-party tallied phase spaces are subject to limitations. In this work, an experimentally based geometry developed for the simulation of the FFF beams of the Varian TrueBeam linac is presented. The Monte Carlo geometrical model of the TrueBeam linac uses information provided by Varian that reveals large similarities between the TrueBeam machine and the Clinac 2100 downstream of the jaws. Thus, the upper part of the TrueBeam linac was modeled by introducing modifications to the Varian Clinac 2100 linac geometry. The most important of these modifications is the replacement of the standard flattening filters by ad hoc thin filters. These filters were modeled by comparing dose measurements and simulations. The experimental dose profiles for the 6 MV and 10 MV FFF beams were obtained from the Varian Golden Data Set and from in-house measurements performed with a diode detector for radiation fields ranging from 3  ×  3 to 40  ×  40 cm2 at depths of maximum dose of 5 and 10 cm. Indicators of agreement between the experimental data and the simulation results obtained with the proposed geometrical model were the dose differences, the root-mean-square error and the gamma index. The same comparisons were performed for dose profiles obtained from Monte Carlo simulations using the phase-space files distributed by Varian for the TrueBeam linac as the sources of particles. Results of comparisons show a good agreement of the dose for the ansatz geometry similar to that obtained for the simulations with the TrueBeam phase-space files for all fields and depths considered, except for the

  8. A geometrical model for the Monte Carlo simulation of the TrueBeam linac.

    PubMed

    Rodriguez, M; Sempau, J; Fogliata, A; Cozzi, L; Sauerwein, W; Brualla, L

    2015-06-01

    Monte Carlo simulation of linear accelerators (linacs) depends on the accurate geometrical description of the linac head. The geometry of the Varian TrueBeam linac is not available to researchers. Instead, the company distributes phase-space files of the flattening-filter-free (FFF) beams tallied at a plane located just upstream of the jaws. Yet, Monte Carlo simulations based on third-party tallied phase spaces are subject to limitations. In this work, an experimentally based geometry developed for the simulation of the FFF beams of the Varian TrueBeam linac is presented. The Monte Carlo geometrical model of the TrueBeam linac uses information provided by Varian that reveals large similarities between the TrueBeam machine and the Clinac 2100 downstream of the jaws. Thus, the upper part of the TrueBeam linac was modeled by introducing modifications to the Varian Clinac 2100 linac geometry. The most important of these modifications is the replacement of the standard flattening filters by ad hoc thin filters. These filters were modeled by comparing dose measurements and simulations. The experimental dose profiles for the 6 MV and 10 MV FFF beams were obtained from the Varian Golden Data Set and from in-house measurements performed with a diode detector for radiation fields ranging from 3  ×  3 to 40  ×  40 cm(2) at depths of maximum dose of 5 and 10 cm. Indicators of agreement between the experimental data and the simulation results obtained with the proposed geometrical model were the dose differences, the root-mean-square error and the gamma index. The same comparisons were performed for dose profiles obtained from Monte Carlo simulations using the phase-space files distributed by Varian for the TrueBeam linac as the sources of particles. Results of comparisons show a good agreement of the dose for the ansatz geometry similar to that obtained for the simulations with the TrueBeam phase-space files for all fields and depths considered, except for

  9. Enhancement of Generic Building Models by Recognition and Enforcement of Geometric Constraints

    NASA Astrophysics Data System (ADS)

    Meidow, J.; Hammer, H.; Pohl, M.; Bulatov, D.

    2016-06-01

    Many buildings in 3D city models can be represented by generic models, e.g. boundary representations or polyhedrons, without expressing building-specific knowledge explicitly. Without additional constraints, the bounding faces of these building reconstructions do not feature expected structures such as orthogonality or parallelism. The recognition and enforcement of man-made structures within model instances is one way to enhance 3D city models. Since the reconstructions are derived from uncertain and imprecise data, crisp relations such as orthogonality or parallelism are rarely satisfied exactly. Furthermore, the uncertainty of geometric entities is usually not specified in 3D city models. Therefore, we propose a point sampling which simulates the initial point cloud acquisition by airborne laser scanning and provides estimates for the uncertainties. We present a complete workflow for recognition and enforcement of man-made structures in a given boundary representation. The recognition is performed by hypothesis testing and the enforcement of the detected constraints by a global adjustment of all bounding faces. Since the adjustment changes not only the geometry but also the topology of faces, we obtain improved building models which feature regular structures and a potentially reduced complexity. The feasibility and the usability of the approach are demonstrated with a real data set.

  10. A Novel Method of Modeling the Deformation Resistance for Clad Sheet

    SciTech Connect

    Hu Jianliang; Yi Youping; Xie Mantang

    2011-08-22

    Because of the excellent thermal conductivity, the clad sheet (3003/4004/3003) of aluminum alloy is extensively used in various heat exchangers, such as radiator, motorcar air conditioning, evaporator, and so on. The deformation resistance model plays an important role in designing the process parameters of hot continuous rolling. However, the complex behaviors of the plastic deformation of the clad sheet make the modeling very difficult. In this work, a novel method for modeling the deformation resistance of clad sheet was proposed by combining the finite element analysis with experiments. The deformation resistance model of aluminum 3003 and 4004 was proposed through hot compression test on the Gleeble-1500 thermo-simulation machine. And the deformation resistance model of clad sheet was proposed through finite element analysis using DEFORM-2D software. The relationship between cladding ratio and the deformation resistance was discussed in detail. The results of hot compression simulation demonstrate that the cladding ratio has great effects on the resistance of the clad sheet. Taking the cladding ratio into consideration, the mathematical model of the deformation resistance for clad sheet has been proved to have perfect forecasting precision of different cladding ratio. Therefore, the presented model can be used to predict the rolling force of clad sheet during the hot continuous rolling process.

  11. Proximity potential for heavy ion reactions on deformed nuclei

    SciTech Connect

    Baltz, A. J.; Bayman, B. F.

    1982-01-01

    The usual treatment of the deformed optical model for analysis of heavy ion induced inelastic scattering data involves a deformed (target) radius, a spherical (projectile) radius and a potential strength dependent on the surface separation along the line between the two centers. Several authors using various approaches have shown that this center line potential is geometrically inadequate especially for description of higher L deformation parameters probed in heavy ion induced inelastic scattering experiments. A quantitatively adequate form of the deformed proximity potential suitable for use with a coupled channels reaction code in the analysis of inelastic scattering data above the Coulomb barrier is described. A major objective is to be able to extract reliably higher deformed multipole moments from such data. The deformed potential calculated in the folding model will serve as a geometrically exact benchmark to evaluate the accuracy of the proximity potential prescriptions. (WHK)

  12. Domain Adaptation of Deformable Part-Based Models.

    PubMed

    Xu, Jiaolong; Ramos, Sebastian; Vázquez, David; López, Antonio M

    2014-12-01

    The accuracy of object classifiers can significantly drop when the training data (source domain) and the application scenario (target domain) have inherent differences. Therefore, adapting the classifiers to the scenario in which they must operate is of paramount importance. We present novel domain adaptation (DA) methods for object detection. As proof of concept, we focus on adapting the state-of-the-art deformable part-based model (DPM) for pedestrian detection. We introduce an adaptive structural SVM (A-SSVM) that adapts a pre-learned classifier between different domains. By taking into account the inherent structure in feature space (e.g., the parts in a DPM), we propose a structure-aware A-SSVM (SA-SSVM). Neither A-SSVM nor SA-SSVM needs to revisit the source-domain training data to perform the adaptation. Rather, a low number of target-domain training examples (e.g., pedestrians) are used. To address the scenario where there are no target-domain annotated samples, we propose a self-adaptive DPM based on a self-paced learning (SPL) strategy and a Gaussian Process Regression (GPR). Two types of adaptation tasks are assessed: from both synthetic pedestrians and general persons (PASCAL VOC) to pedestrians imaged from an on-board camera. Results show that our proposals avoid accuracy drops as high as 15 points when comparing adapted and non-adapted detectors. PMID:26353145

  13. Using transverse isotropy to model arbitrary deformation-induced anisotropy

    SciTech Connect

    Brannon, R.M.

    1996-07-01

    A unifying framework is developed for the analysis of brittle materials. Heretofore diverse classes of models result from different choices for unspecified coefficient and distribution functions in the unified theory. Material response is described in terms of expectation integrals of transverse symmetry tensors. First, a canonical body containing cracks of all the same orientation is argued to possess macroscopic transverse isotropy. An orthogonal basis for the linear subspace consisting of all double-symmetric transversely-isotropic fourth-order tensors associated with a given material vector is introduced and applied to deduce the explicit functional dependence of the compliance of such contrived materials on the shared crack orientation. A principle of superposition of strain rates is used to write the compliance for a more realistic material consisting of cracks of random size and orientation as an expectation integral of the transverse compliance for each orientation times the joint distribution function for the size and orientation. Utilizing an evolving (initially exponential) size- dependence in the joint distribution, the general theory gives unprecedented agreement with measurements of the dynamic response of alumina to impact loading, especially upon release where the calculations predict the development of considerable deformation- induced anisotropy, challenging the conventional notion of shocks as isotropic phenomena.

  14. Computer-aided geometric modeling of the human eye and orbit.

    PubMed

    Parshall, R F

    1991-01-01

    The author advocates, as a long-term development agenda for the profession, a shift in the working methods of medical illustrators from a two-dimensional image processing mode to a computer-aided design and drafting (CADD) mode. Existing CADD technology, which can make short work of the complex graphic construction problems of anatomical visualization, performs virtually all of its manipulations through systematic exercise of graphic geometry which illustrators tend to reduce to an intuitive, almost vestigial supplement to 2D image processing methods. The primary barrier to the immediate use of CADD is a lack of geometric database materials on anatomical component systems of the body. An on-going experimental project in modeling the human eye and orbit, utilizing a Silicon Graphics Iris workstation and Control Data Corporation's Integrated Computerized Engineering and Manufacturing (ICEM) software, exemplifies the preparatory work needed to create such database materials. PMID:1874709

  15. Application of the single surface extended model of geometrical splitting in Monte Carlo

    SciTech Connect

    Dubi, A.; Burn, K.; Goldfeld, A.

    1985-12-01

    Recently a detailed theory analyzing the dependence of the second moment and calculational time upon geometrical splitting was developed based on the direct statistical approach (DSA). The extended model refers to the application of the DSA to the case in which splitting and Russian roulette are used depending on the direction in which the particle crosses the surface, but with the limitation that any source particle reaching the detector must have crossed the surface. The results of a first attempt to use the theoretical results for the optimization of the splitting parameter on on surface in a practical problem are reported. The feasibility of the method in predicting a near optimum splitting parameter is demonstrated, and the application of the method to multiple surface problem is discussed.

  16. Parametric geometric model and shape optimization of an underwater glider with blended-wing-body

    NASA Astrophysics Data System (ADS)

    Sun, Chunya; Song, Baowei; Wang, Peng

    2015-11-01

    Underwater glider, as a new kind of autonomous underwater vehicles, has many merits such as long-range, extended-duration and low costs. The shape of underwater glider is an important factor in determining the hydrodynamic efficiency. In this paper, a high lift to drag ratio configuration, the Blended-Wing-Body (BWB), is used to design a small civilian under water glider. In the parametric geometric model of the BWB underwater glider, the planform is defined with Bezier curve and linear line, and the section is defined with symmetrical airfoil NACA 0012. Computational investigations are carried out to study the hydrodynamic performance of the glider using the commercial Computational Fluid Dynamics (CFD) code Fluent. The Kriging-based genetic algorithm, called Efficient Global Optimization (EGO), is applied to hydrodynamic design optimization. The result demonstrates that the BWB underwater glider has excellent hydrodynamic performance, and the lift to drag ratio of initial design is increased by 7% in the EGO process.

  17. Geometrical optics approximation modeling of laser measurements of an operating Bessemer-converter casing

    NASA Astrophysics Data System (ADS)

    Mihalev, Mihail; Parvanov, Orlin; Pirgov, Peter S.

    1996-12-01

    We report the use of computer techniques for modeling and visualization of the laser monitoring of the inner surface of an operating Bessemer converter. The purpose of the study was to estimate the accuracy of the laser measurement technique, to determine the geometrical parameters necessary, and to establish the requirements to the accuracy of the scanning part of a laser meter when the pulse duration, beam divergence and defects size are pre-set. The following basic conclusions can be drawn: firstly, it is possible to use a laser meter as a device for monitoring the casing thickness based on the use of a pulsed solid-state laser; secondly, the process of non-uniform wear can be handled by means of additional measurements with off-axis sounding geometry; thirdly, the numerical experiment demonstrates that, based on the accuracy achieved of determining the casing thickness, the operating life-time of the converter can be extended.

  18. A New Family of Interpolatory Non-Stationary Subdivision Schemes for Curve Design in Geometric Modeling

    NASA Astrophysics Data System (ADS)

    Conti, Costanza; Romani, Lucia

    2010-09-01

    Univariate subdivision schemes are efficient iterative methods to generate smooth limit curves starting from a sequence of arbitrary points. Aim of this paper is to present and investigate a new family of 6-point interpolatory non-stationary subdivision schemes capable of reproducing important curves of great interest in geometric modeling and engineering applications, if starting from uniformly spaced initial samples. This new family can reproduce conic sections since it is obtained by a parameter depending affine combination of the cubic exponential B-spline symbol generating functions in the space V4,γ = {1,x,etx,e-tx} with t∈{0,s,is|s>0}. Moreover, the free parameter can be chosen to reproduce also other interesting analytic curves by imposing the algebraic conditions for the reproduction of an additional pair of exponential polynomials giving rise to different extensions of the space V4,γ.

  19. On a geometric model of crystal growth on a flat substrate

    NASA Astrophysics Data System (ADS)

    Brednikhina, Anna; Debelov, Victor A.

    2009-01-01

    This paper is devoted to computer simulation of crystalline aggregates growth from a homogeneous solution. This process is considered from the geometric point of view, when crystals can be represented as a collection of flat faces, growing layer by layer with stable relative growth rates in the directions of their perpendiculars. Simply speaking, we extend Frank's model [H. Muller-Krumbhaar, Yu. Saito, Crystal Growth and Solidification, in: Surfactant Science Series, vol. 89, CRC Press, Boca Raton, FL, 2000, pp. 853-854] to the case of simultaneous growth of several individuals placed on a flat unbounded static substrate. Attention is given not only to finding the outer boundary of an aggregate but to determining the interfacing surfaces between individuals. In other words, our goal is to construct detailed bounding surfaces of all individuals included in an aggregate.

  20. A geometric model of a V-slit Sun sensor correcting for spacecraft wobble

    NASA Technical Reports Server (NTRS)

    Mcmartin, W. P.; Gambhir, S. S.

    1994-01-01

    A V-Slit sun sensor is body-mounted on a spin-stabilized spacecraft. During injection from a parking or transfer orbit to some final orbit, the spacecraft may not be dynamically balanced. This may result in wobble about the spacecraft spin axis as the spin axis may not be aligned with the spacecraft's axis of symmetry. While the widely used models in Spacecraft Attitude Determination and Control, edited by Wertz, correct for separation, elevation, and azimuthal mounting biases, spacecraft wobble is not taken into consideration. A geometric approach is used to develop a method for measurement of the sun angle which corrects for the magnitude and phase of spacecraft wobble. The algorithm was implemented using a set of standard mathematical routines for spherical geometry on a unit sphere.

  1. A Model for the Origin and Properties of Flicker-Induced Geometric Phosphenes

    PubMed Central

    Rule, Michael; Stoffregen, Matthew; Ermentrout, Bard

    2011-01-01

    We present a model for flicker phosphenes, the spontaneous appearance of geometric patterns in the visual field when a subject is exposed to diffuse flickering light. We suggest that the phenomenon results from interaction of cortical lateral inhibition with resonant periodic stimuli. We find that the best temporal frequency for eliciting phosphenes is a multiple of intrinsic (damped) oscillatory rhythms in the cortex. We show how both the quantitative and qualitative aspects of the patterns change with frequency of stimulation and provide an explanation for these differences. We use Floquet theory combined with the theory of pattern formation to derive the parameter regimes where the phosphenes occur. We use symmetric bifurcation theory to show why low frequency flicker should produce hexagonal patterns while high frequency produces pinwheels, targets, and spirals. PMID:21980269

  2. An asperity-deformation model for effective pressure

    NASA Astrophysics Data System (ADS)

    Gangi, Anthony F.; Carlson, Richard L.

    1996-05-01

    Variations of the mechanical and transport properties of cracked and/or porous rocks under isotropic stress depend on both the confining pressure ( Pc) and the pore-fluid pressure ( Pp). To a first approximation, these rock properties are functions of the differential pressure, Pd = Pc - Pp; at least for low differential pressures. However, at higher differential pressures, the properties depend in a more complicated way upon the two pressures. The concept of effective pressure, Pe, is used to denote this variation and it is defined as Pe( Pc, Pp) = Pc - n( Pc, Pp) Pp. If n = 1 (and therefore, is independent of Pc and Pp), the effective pressure is just the differential pressure. We have used an asperity-deformation model and a force-balance equation to derive expressions for the effective pressure. We equate the total external force (in one direction), Fc, to the total force on the asperities, Fa, and the force of the fluid, Fp, acting in that same direction. The fluid force, Fp, acts only on the parts of the crack (or pore-volume) faces which are not in contact. Then, the asperity pressure, Pa, is the average force per unit area acting on the crack (or grain) contacts P a = {F a}/{A} = {F c}/{A} - {F p}/{A} = P c - (1 - {A c}/{A})P p, where A is the total area over which Fc acts and Ac is the area of contact of the crack asperities or the grains. Thus, the asperity pressure, Pa, is greater than the differential pressure, Pd, because Pp acts on a smaller area, A- Ac, than the total area, A. For elastic asperities, the area of contact Ac and the strain (e.g., crack and pore openings) remain the same, to a high degree of approximation, at constant asperity pressure. Therefore, transport properties such as permeability, resistivity, thermal conductivity, etc. are constant, to the same degree of approximation, at constant asperity pressure. For these properties, the asperity pressure is, very accurately, the effective pressure, Pc. Using this model, we find that the

  3. Geometrical and gravimetrical observations of the Aral Sea and its tributaries along with hydrological models

    NASA Astrophysics Data System (ADS)

    Singh, A.; Seitz, F.; Schwatke, C.; Güntner, A.

    2012-04-01

    Satellite altimetry is capable of measuring surface water level changes of large water bodies. This is especially interesting for regions where in-situ gauges are sparse or not available. Temporal variations of coastline and horizontal extent of a water body can be derived from optical remote sensing data. A joint analysis of both data types together with a digital elevation model allows for the estimation of water volume changes. Related variations of water mass map into the observations of the satellite gravity field mission GRACE. In this presentation, we demonstrate the application of heterogeneuous remote sensing methods for studying chages of water volume and mass of the Aral Sea and compare the results with respect to their consistency. Our analysis covers the period 2002-2011. In particular we deal with data from multi-mission radar and laser satellite altimetry that are analyzed in combination with coastlines from Landsat images. The resultant vertical and horizontal variations of the lake surface are geometrically intersected with the bathymetry of the Aral Sea in order to compute volumetric changes. These are transformed into variations of water mass that are subsequently compared with storage changes derived from GRACE satellite gravimetry. Hence we obtain a comprehensive picture of the hydrological changes in the region. Observations from all datasets correspond quite well with each other with respect to their temporal development. However, geometrically determined volume changes and mass changes observed by GRACE agree less well during years of heavy water inflow in to the Aral Sea from its southern tributary 'Amu Darya' since the GRACE signals are contaminated by the large mass of water stored in the river delta and prearalie region On the other hand, GRACE observations of the river basins of Syr Darya and Amu Dayra correspond very well with hydrological models and mass changes computed from the balance of precipitation, evaporation and runoff

  4. Surrogate-driven deformable motion model for organ motion tracking in particle radiation therapy

    NASA Astrophysics Data System (ADS)

    Fassi, Aurora; Seregni, Matteo; Riboldi, Marco; Cerveri, Pietro; Sarrut, David; Battista Ivaldi, Giovanni; Tabarelli de Fatis, Paola; Liotta, Marco; Baroni, Guido

    2015-02-01

    The aim of this study is the development and experimental testing of a tumor tracking method for particle radiation therapy, providing the daily respiratory dynamics of the patient’s thoraco-abdominal anatomy as a function of an external surface surrogate combined with an a priori motion model. The proposed tracking approach is based on a patient-specific breathing motion model, estimated from the four-dimensional (4D) planning computed tomography (CT) through deformable image registration. The model is adapted to the interfraction baseline variations in the patient’s anatomical configuration. The driving amplitude and phase parameters are obtained intrafractionally from a respiratory surrogate signal derived from the external surface displacement. The developed technique was assessed on a dataset of seven lung cancer patients, who underwent two repeated 4D CT scans. The first 4D CT was used to build the respiratory motion model, which was tested on the second scan. The geometric accuracy in localizing lung lesions, mediated over all breathing phases, ranged between 0.6 and 1.7 mm across all patients. Errors in tracking the surrounding organs at risk, such as lungs, trachea and esophagus, were lower than 1.3 mm on average. The median absolute variation in water equivalent path length (WEL) within the target volume did not exceed 1.9 mm-WEL for simulated particle beams. A significant improvement was achieved compared with error compensation based on standard rigid alignment. The present work can be regarded as a feasibility study for the potential extension of tumor tracking techniques in particle treatments. Differently from current tracking methods applied in conventional radiotherapy, the proposed approach allows for the dynamic localization of all anatomical structures scanned in the planning CT, thus providing complete information on density and WEL variations required for particle beam range adaptation.

  5. Estimating the actual dose delivered by intravascular coronary brachytherapy using geometrically correct 3D modeling

    NASA Astrophysics Data System (ADS)

    Wahle, Andreas; Lopez, John J.; Pennington, Edward C.; Meeks, Sanford L.; Braddy, Kathleen C.; Fox, James M.; Brennan, Theresa M. H.; Buatti, John M.; Rossen, James D.; Sonka, Milan

    2003-05-01

    Intravascular brachytherapy has shown to reduce re-occurrence of in-stent restenosis in coronary arteries. For beta radiation, application time is determined from source activity and the angiographically estimated vessel diameter. Conventionally used dosing models assume a straight vessel with the catheter centered and a constant-diameter circular cross section. Aim of this study was to compare the actual dose delivered during in-vivo intravascular brachytherapy with the target range determined from the patient's prescribed dose. Furthermore, differences in dose distribution between a simplified tubular model (STM) and a geometrically correct 3-D model (GCM) obtained from fusion between biplane angiography and intravascular ultrasound were quantified. The tissue enclosed by the segmented lumen/plaque and media/adventitia borders was simulated using a structured finite-element mesh. The beta-radiation sources were modeled as 3-D objects in their angiographically determined locations. The accumulated dose was estimated using a fixed distance function based on the patient-specific radiation parameters. For visualization, the data was converted to VRML with the accumulated doses represented by color encoding. The statistical comparison between STM and GCM models in 8 patients showed that the STM significantly underestimates the dose delivered and its variability. The analysis revealed substantial deviations from the target dose range in curved vessels.

  6. Visualization of 3D geometric models of the breast created from contrast-enhanced MRI

    NASA Astrophysics Data System (ADS)

    Leader, J. Ken, III; Wang, Xiao Hui; Chang, Yuan-Hsiang; Chapman, Brian E.

    2002-05-01

    Contrast enhanced breast MRI is currently used as an adjuvant modality to x-ray mammography because of its ability to resolve ambiguities and determine the extent of malignancy. This study described techniques to create and visualize 3D geometric models of abnormal breast tissue. MRIs were performed on a General Electric 1.5 Tesla scanner using dual phased array breast coils. Image processing tasks included: 1) correction of image inhomogeneity caused by the coils, 2) segmentation of normal and abnormal tissue, and 3) modeling and visualization of the segmented tissue. The models were visualized using object-based surface rendering which revealed characteristics critical to differentiating benign from malignant tissue. Surface rendering illustrated the enhancement distribution and enhancement patterns. The modeling process condensed the multi-slice MRI data information and standardized its interpretation. Visualizing the 3D models should improve the radiologist's and/or surgeon's impression of the 3D shape, extent, and accessibility of the malignancy compared to viewing breast MRI data slice by slice.

  7. Geometric models, antenna gains, and protection ratios as developed for BC SAT-R2 conference software

    NASA Technical Reports Server (NTRS)

    Miller, E. F.

    1982-01-01

    Mathematical models used in the software package developed for use at the 1983 Regional Administrative Radio Conference on broadcasting satellites. The models described are those used in the Spectrum Orbit Utilization Program (SOUP) analysis. The geometric relationships necessary to model broadcasting satellite systems are discussed. Antenna models represent copolarized and cross polarized performance as functions of the off axis angle. The protection ratio is modelled as a co-channel value and a template representing systems with frequency offsets.

  8. Effect of Material Property Heterogeneity on Biomechanical Modeling of Prostate under Deformation

    PubMed Central

    Samavati, Navid; McGrath, Deirdre M.; Jewett, Michael A.S.; van der Kwast, Theo; Ménard, Cynthia; Brock, Kristy K.

    2015-01-01

    Biomechanical model based deformable image registration has been widely used to account for prostate deformation in various medical imaging procedures. Biomechanical material properties are important components of a biomechanical model. In this study, the effect of incorporating tumor-specific material properties in the prostate biomechanical model was investigated to provide insight into the potential impact of material heterogeneity on the prostate deformation calculations First, a simple spherical prostate and tumor model was used to analytically describe the deformations and demonstrate the fundamental effect of changes in the tumor volume and stiffness in the modeled deformation. Next, using clinical prostate model, a parametric approach was used to describe the variations in the heterogeneous prostate model by changing tumor volume, stiffness, and location, to show the differences in the modeled deformation between heterogeneous and homogeneous prostate models. Finally, five clinical prostatectomy examples were used in separately performed homogeneous and heterogeneous biomechanical model based registrations to describe the deformations between 3D reconstructed histopathology images and ex vivo Magnetic Resonance Imaging (MRI), and examine the potential clinical impact of modeling biomechanical heterogeneity of the prostate. The analytical formulation showed that increasing the tumor volume and stiffness could significantly increase the impact of heterogeneous prostate model in the calculated displacement differences compared to homogeneous model. The parametric approach using a single prostate model indicated up to 4.8 mm of displacement difference at the tumor boundary compared to a homogeneous model. . Such differences in the deformation of prostate could bepotentially clinically significant given the voxel size of the ex vivo MR images (0.3×0.3×0.3 mm). However, no significant changes in the registration accuracy were observed using heterogeneous models

  9. Effect of material property heterogeneity on biomechanical modeling of prostate under deformation

    NASA Astrophysics Data System (ADS)

    Samavati, Navid; McGrath, Deirdre M.; Jewett, Michael A. S.; van der Kwast, Theo; Ménard, Cynthia; Brock, Kristy K.

    2015-01-01

    Biomechanical model based deformable image registration has been widely used to account for prostate deformation in various medical imaging procedures. Biomechanical material properties are important components of a biomechanical model. In this study, the effect of incorporating tumor-specific material properties in the prostate biomechanical model was investigated to provide insight into the potential impact of material heterogeneity on the prostate deformation calculations. First, a simple spherical prostate and tumor model was used to analytically describe the deformations and demonstrate the fundamental effect of changes in the tumor volume and stiffness in the modeled deformation. Next, using a clinical prostate model, a parametric approach was used to describe the variations in the heterogeneous prostate model by changing tumor volume, stiffness, and location, to show the differences in the modeled deformation between heterogeneous and homogeneous prostate models. Finally, five clinical prostatectomy examples were used in separately performed homogeneous and heterogeneous biomechanical model based registrations to describe the deformations between 3D reconstructed histopathology images and ex vivo magnetic resonance imaging, and examine the potential clinical impact of modeling biomechanical heterogeneity of the prostate. The analytical formulation showed that increasing the tumor volume and stiffness could significantly increase the impact of the heterogeneous prostate model in the calculated displacement differences compared to the homogeneous model. The parametric approach using a single prostate model indicated up to 4.8 mm of displacement difference at the tumor boundary compared to a homogeneous model. Such differences in the deformation of the prostate could be potentially clinically significant given the voxel size of the ex vivo MR images (0.3  ×  0.3  ×  0.3 mm). However, no significant changes in the registration accuracy were

  10. Detection and registration of ribs in MRI using geometric and appearance models.

    PubMed

    Samei, Golnoosh; Székely, Gábor; Tanner, Christine

    2014-01-01

    Magnetic resonance guided high intensity focused ultrasound (MRgHIFU) is a new type of minimally invasive therapy for treating malignant liver tissues. Since the ribs on the beam path can compromise an effective therapy, detecting them and tracking their motion on MR images is of great importance. However, due to poor magnetic signal emission of bones, ribs cannot be entirely observed in MR. In the proposed method, we take advantage of the accuracy of CT in imaging the ribs to build a geometric ribcage model and combine it with an appearance model of the neighbouring structures of ribs in MR to reconstruct realistic centerlines in MRIs. We have improved our previous method by using a more sophisticated appearance model, a more flexible ribcage model, and a more effective optimization strategy. We decreased the mean error to 2.5 mm, making the method suitable for clinical application. Finally, we propose a rib registration method which conserves the shape and length of ribs, and imposes realistic constraints on their motions, achieving 2.7mm mean accuracy.

  11. Towards geometric D6-brane model building on non-factorisable toroidal ℤ 4-orbifolds

    NASA Astrophysics Data System (ADS)

    Berasaluce-González, Mikel; Honecker, Gabriele; Seifert, Alexander

    2016-08-01

    We present a geometric approach to D-brane model building on the non-factorisable torus backgrounds of T 6/ ℤ 4, which are A 3 × A 3 and A 3 × A 1 × B 2. Based on the counting of `short' supersymmetric three-cycles per complex structure vev, the number of physically inequivalent lattice orientations with respect to the anti-holomorphic involution ℛ of the Type IIA/Ωℛ orientifold can be reduced to three for the A 3 × A 3 lattice and four for the A 3 × A 1 × B 2 lattice. While four independent three-cycles on A 3 × A 3 cannot accommodate phenomenologically interesting global models with a chiral spectrum, the eight-dimensional space of three-cycles on A 3 × A 1 × B 2 is rich enough to provide for particle physics models, with several globally consistent two- and four-generation Pati-Salam models presented here.

  12. Competition and fixation of cohorts of adaptive mutations under Fisher geometrical model

    PubMed Central

    Alpedrinha, João; Campos, Paulo R.A.; Gordo, Isabel

    2016-01-01

    One of the simplest models of adaptation to a new environment is Fisher’s Geometric Model (FGM), in which populations move on a multidimensional landscape defined by the traits under selection. The predictions of this model have been found to be consistent with current observations of patterns of fitness increase in experimentally evolved populations. Recent studies investigated the dynamics of allele frequency change along adaptation of microbes to simple laboratory conditions and unveiled a dramatic pattern of competition between cohorts of mutations, i.e., multiple mutations simultaneously segregating and ultimately reaching fixation. Here, using simulations, we study the dynamics of phenotypic and genetic change as asexual populations under clonal interference climb a Fisherian landscape, and ask about the conditions under which FGM can display the simultaneous increase and fixation of multiple mutations—mutation cohorts—along the adaptive walk. We find that FGM under clonal interference, and with varying levels of pleiotropy, can reproduce the experimentally observed competition between different cohorts of mutations, some of which have a high probability of fixation along the adaptive walk. Overall, our results show that the surprising dynamics of mutation cohorts recently observed during experimental adaptation of microbial populations can be expected under one of the oldest and simplest theoretical models of adaptation—FGM. PMID:27547562

  13. Investigation of the pore geometrical structure of nanofibrous membranes using statistical modelling

    NASA Astrophysics Data System (ADS)

    Khanmohammadi Khoshui, Sedigheh; Hosseini Ravandi, Seyed Abdolkarim; Bagherzadeh, Roohollah; Saberi, Zahra; Karimi, Mohammad

    2016-10-01

    The pore size and its distribution are the two main geometrical properties of nanofibrous membranes in various applications such as filtration and tissue engineering. In the current paper, a modified approach (model) is suggested to predict pore size and its distribution in nanofibrous membranes. In the present work, inter-fibre pores are considered as polygons arising from the fibre contacts. For the first time, these polygons are assumed to be three-, four- and five-gons, and the hydraulic radius of the pores was obtained instead of the equal radius. The pore size of multilayer mats was provided with a different insight. The pore mean size and its distribution were obtained by statistical methods. In order to validate the model, polycaprolactone (PCL) nanofibrous mats were electrospun, and the mean pore size and its distribution were measured using porosimetry. It was found that the probability distribution function of the pore size in both single and multi nanofibrous layers was the Gamma function with two parameters. The effect of the fibre width and porosity raise was increasing of mean pore diameter of multilayer networks. A comparison between the modified model and previous models revealed that the modified approach was more realistic.

  14. Forest crown closure retrieval and change detection using an inverted geometric-optical model

    NASA Astrophysics Data System (ADS)

    Zeng, Y.; Wu, B.

    2012-12-01

    The objective of this study is to use an inversion of the Li-Strahler geometric-optical model combined with a scaling-based endmember extraction method and a spatial interpolation technique to retrieve and detect the changes of a forest canopy structural property, crown closure (CC), in the Three Gorges reservoir region of China. A MODIS image covered the whole study area and a Landsat TM data located in the typical region are collected together for each year from 2001 to 2010. We firstly extract the viewed surface components endmembers from the MODIS data by the regional scaling-based linear unmixing model using the corresponding Landsat TM image; secondly, derive and map the forest structural variable CC by inverting the Li-Strahler model based on the extracted endmembers for each year; thirdly, complement prediction deficiencies of the inverted Li-Strahler model derived CC by using a spatial interpolation algorithm (regression kriging) in the infeasible regions; finally produce spatially continuous CC maps for the 10 years and representing CC changes between 2001 and 2010. The results show a decrease in CC in the eastern counties of the Three Gorges region located close to the Three Gorges Dam, which is the largest hydroelectric dam in the world. An increase in CC has been observed in other counties of the Three Gorges region, implying a preliminary positive feedback on certain policy measures taken safeguarding forest structure.

  15. Competition and fixation of cohorts of adaptive mutations under Fisher geometrical model.

    PubMed

    Moura de Sousa, Jorge A; Alpedrinha, João; Campos, Paulo R A; Gordo, Isabel

    2016-01-01

    One of the simplest models of adaptation to a new environment is Fisher's Geometric Model (FGM), in which populations move on a multidimensional landscape defined by the traits under selection. The predictions of this model have been found to be consistent with current observations of patterns of fitness increase in experimentally evolved populations. Recent studies investigated the dynamics of allele frequency change along adaptation of microbes to simple laboratory conditions and unveiled a dramatic pattern of competition between cohorts of mutations, i.e., multiple mutations simultaneously segregating and ultimately reaching fixation. Here, using simulations, we study the dynamics of phenotypic and genetic change as asexual populations under clonal interference climb a Fisherian landscape, and ask about the conditions under which FGM can display the simultaneous increase and fixation of multiple mutations-mutation cohorts-along the adaptive walk. We find that FGM under clonal interference, and with varying levels of pleiotropy, can reproduce the experimentally observed competition between different cohorts of mutations, some of which have a high probability of fixation along the adaptive walk. Overall, our results show that the surprising dynamics of mutation cohorts recently observed during experimental adaptation of microbial populations can be expected under one of the oldest and simplest theoretical models of adaptation-FGM. PMID:27547562

  16. A theoretical model of grainsize evolution during deformation

    NASA Astrophysics Data System (ADS)

    Ricard, Y.; Bercovici, D.; Rozel, A.

    2007-12-01

    Lithospheric shear localization, as occurs in the formation of tectonic plate boundaries, is often associated with diminished grainsize (e.g., mylonites). Grainsize reduction is typically attributed to dynamic recrystallization; however, theoretical models of shear-localization arising from this hypothesis are problematic since (1) they require the simultaneous action of two exclusive creep mechanisms (diffusion and dislocation creep), and (2) the grain-growth ("healing") laws employed by these models are derived from static grain-growth or coarsening theory, although the shear-localization setting itself is far from static equilibrium. We present a new first-principles grained-continuum theory which accounts for both coarsening and damage-induced grainsize reduction. Damage per se is the generic process for generation of microcracks, defects, dislocations (including recrystallization), subgrains, nucleii and cataclastic breakdown of grains. The theory contains coupled statistical grain-scale and continuum macroscopic components. The grain-scale element of the theory prescribes both the evolution of the grainsize distribution, and a phenomenological grain-growth law derived from non-equilibrium thermodynamics; grain-growth thus incorporates the free energy differences between grains, including both grain-boundary surface energy (which controls coarsening) and the contribution of deformational work to these free energiesconservation and positivity of entropy production provide the phenomenological law for the statistical grain-growth law. We identify four potential mechanisms that affect the distribution of grainsize; two of them conserve the number of grains but change their relative masses and two of them change the number of grains by sticking them together or breaking them. In the limit of static equilibrium, only the two mechanisms that increase the average grainsize are allowed by the second law of thermodynamics. The first one is a diffusive mass transport

  17. Watermarked cardiac CT image segmentation using deformable models and the Hermite transform

    NASA Astrophysics Data System (ADS)

    Gomez-Coronel, Sandra L.; Moya-Albor, Ernesto; Escalante-Ramírez, Boris; Brieva, Jorge

    2015-01-01

    Medical image watermarking is an open area for research and is a solution for the protection of copyright and intellectual property. One of the main challenges of this problem is that the marked images should not differ perceptually from the original images allowing a correct diagnosis and authentication. Furthermore, we also aim at obtaining watermarked images with very little numerical distortion so that computer vision tasks such as segmentation of important anatomical structures do not be impaired or affected. We propose a preliminary watermarking application in cardiac CT images based on a perceptive approach that includes a brightness model to generate a perceptive mask and identify the image regions where the watermark detection becomes a difficult task for the human eye. We propose a normalization scheme of the image in order to improve robustness against geometric attacks. We follow a spread spectrum technique to insert an alphanumeric code, such as patient's information, within the watermark. The watermark scheme is based on the Hermite transform as a bio-inspired image representation model. In order to evaluate the numerical integrity of the image data after watermarking, we perform a segmentation task based on deformable models. The segmentation technique is based on a vector-value level sets method such that, given a curve in a specific image, and subject to some constraints, the curve can evolve in order to detect objects. In order to stimulate the curve evolution we introduce simultaneously some image features like the gray level and the steered Hermite coefficients as texture descriptors. Segmentation performance was assessed by means of the Dice index and the Hausdorff distance. We tested different mark sizes and different insertion schemes on images that were later segmented either automatic or manual by physicians.

  18. Neotectonic deformation models for probabilistic seismic hazard: a study in the External Dinarides

    NASA Astrophysics Data System (ADS)

    Kastelic, Vanja; Carafa, Michele M. C.; Visini, Francesco

    2016-06-01

    In Europe, common input data types for seismic hazard evaluation include earthquake catalogues, seismic zonation models and ground motion models, all with well-constrained epistemic uncertainties. In contrast, neotectonic deformation models and their related uncertainties are rarely considered in earthquake forecasting and seismic hazard studies. In this study, for the first time in Europe, we developed a seismic hazard model based exclusively on active fault and geodynamic deformation models. We applied it to the External Dinarides, a slow-deforming fold-and-thrust belt in the Central Mediterranean. The two deformation models furnish consistent long-term earthquake rates above the Mw 4.7 threshold on a latitude/longitude grid with 0.2° spacing. Results suggest that the use of deformation models is a valid alternative to empirical-statistical approaches in earthquake forecasting in slow-deforming regions of Europe. Furthermore, we show that the variability of different deformation models has a comparable effect on the peak ground motion acceleration uncertainty as do the ground motion prediction equations.

  19. Computer modeling of electromagnetic problems using the geometrical theory of diffraction

    NASA Technical Reports Server (NTRS)

    Burnside, W. D.

    1976-01-01

    Some applications of the geometrical theory of diffraction (GTD), a high frequency ray optical solution to electromagnetic problems, are presented. GTD extends geometric optics, which does not take into account the diffractions occurring at edges, vertices, and various other discontinuities. Diffraction solutions, analysis of basic structures, construction of more complex structures, and coupling using GTD are discussed.

  20. Borel-Cantelli lemmas and extreme value theory for geometric Lorenz models

    NASA Astrophysics Data System (ADS)

    Zhang, Licheng

    2016-01-01

    We establish dynamical Borel-Cantelli lemmas for nested balls and rectangles centered at generic points in the setting of geometric Lorenz maps. We also establish the convergence of rare events point processes to the standard Poisson process, which implies extreme value laws for observations maximised at generic points for geometric Lorenz maps. Further, we extend our extreme value laws to the associated flows.

  1. Is There a Geometric Module for Spatial Orientation? Insights from a Rodent Navigation Model

    ERIC Educational Resources Information Center

    Sheynikhovich, Denis; Chavarriaga, Ricardo; Strosslin, Thomas; Arleo, Angelo; Gerstner, Wulfram

    2009-01-01

    Modern psychological theories of spatial cognition postulate the existence of a geometric module for reorientation. This concept is derived from experimental data showing that in rectangular arenas with distinct landmarks in the corners, disoriented rats often make diagonal errors, suggesting their preference for the geometric (arena shape) over…

  2. A geometric analysis of fast-slow models for stochastic gene expression.

    PubMed

    Popović, Nikola; Marr, Carsten; Swain, Peter S

    2016-01-01

    Stochastic models for gene expression frequently exhibit dynamics on several different scales. One potential time-scale separation is caused by significant differences in the lifetimes of mRNA and protein; the ratio of the two degradation rates gives a natural small parameter in the resulting chemical master equation, allowing for the application of perturbation techniques. Here, we develop a framework for the analysis of a family of 'fast-slow' models for gene expression that is based on geometric singular perturbation theory. We illustrate our approach by giving a complete characterisation of a standard two-stage model which assumes transcription, translation, and degradation to be first-order reactions. In particular, we present a systematic expansion procedure for the probability-generating function that can in principle be taken to any order in the perturbation parameter, allowing for an approximation of the corresponding propagator probabilities to that same order. For illustrative purposes, we perform this expansion explicitly to first order, both on the fast and the slow time-scales; then, we combine the resulting asymptotics into a composite fast-slow expansion that is uniformly valid in time. In the process, we extend, and prove rigorously, results previously obtained by Shahrezaei and Swain (Proc Natl Acad Sci USA 105(45):17256-17261, 2008) and Bokes et al. (J Math Biol 64(5):829-854, 2012; J Math Biol 65(3):493-520, 2012). We verify our asymptotics by numerical simulation, and we explore its practical applicability and the effects of a variation in the system parameters and the time-scale separation. Focussing on biologically relevant parameter regimes that induce translational bursting, as well as those in which mRNA is frequently transcribed, we find that the first-order correction can significantly improve the steady-state probability distribution. Similarly, in the time-dependent scenario, inclusion of the first-order fast asymptotics results in a

  3. A geometric analysis of fast-slow models for stochastic gene expression.

    PubMed

    Popović, Nikola; Marr, Carsten; Swain, Peter S

    2016-01-01

    Stochastic models for gene expression frequently exhibit dynamics on several different scales. One potential time-scale separation is caused by significant differences in the lifetimes of mRNA and protein; the ratio of the two degradation rates gives a natural small parameter in the resulting chemical master equation, allowing for the application of perturbation techniques. Here, we develop a framework for the analysis of a family of 'fast-slow' models for gene expression that is based on geometric singular perturbation theory. We illustrate our approach by giving a complete characterisation of a standard two-stage model which assumes transcription, translation, and degradation to be first-order reactions. In particular, we present a systematic expansion procedure for the probability-generating function that can in principle be taken to any order in the perturbation parameter, allowing for an approximation of the corresponding propagator probabilities to that same order. For illustrative purposes, we perform this expansion explicitly to first order, both on the fast and the slow time-scales; then, we combine the resulting asymptotics into a composite fast-slow expansion that is uniformly valid in time. In the process, we extend, and prove rigorously, results previously obtained by Shahrezaei and Swain (Proc Natl Acad Sci USA 105(45):17256-17261, 2008) and Bokes et al. (J Math Biol 64(5):829-854, 2012; J Math Biol 65(3):493-520, 2012). We verify our asymptotics by numerical simulation, and we explore its practical applicability and the effects of a variation in the system parameters and the time-scale separation. Focussing on biologically relevant parameter regimes that induce translational bursting, as well as those in which mRNA is frequently transcribed, we find that the first-order correction can significantly improve the steady-state probability distribution. Similarly, in the time-dependent scenario, inclusion of the first-order fast asymptotics results in a

  4. Improved Porosity and Permeability Models with Coal Matrix Block Deformation Effect

    NASA Astrophysics Data System (ADS)

    Zhou, Yinbo; Li, Zenghua; Yang, Yongliang; Zhang, Lanjun; Qi, Qiangqiang; Si, Leilei; Li, Jinhu

    2016-09-01

    Coal permeability is an important parameter in coalbed methane (CBM) exploration and greenhouse gas storage. A reasonable theoretical permeability model is helpful for analysing the influential factors of gas flowing in a coalbed. As an unconventional reservoir, the unique feature of a coal structure deformation determines the state of gas seepage. The matrix block and fracture change at the same time due to changes in the effective stress and adsorption; the porosity and permeability also change. Thus, the matrix block deformation must be ignored in the theoretical model. Based on the cubic model, we analysed the characteristics of matrix block deformation and fracture deformation. The new models were developed with the change in matrix block width a. We compared the new models with other models, such as the Palmer-Manson (P-M) model and the Shi-Durucan (S-D) model, and used a constant confining stress. By matching the experimental data, our model matches quite well and accurately predicts the evolution of permeability. The sorption-induced strain coefficient f differs between the strongly adsorbing gases and weakly adsorbing gases because the matrix block deformation is more sensitive for the weakly adsorbing gases and the coefficient f is larger. The cubic relationship between porosity and permeability overlooks the importance of the matrix block deformation. In our model, the matrix block deformation suppresses the permeability ratio growth. With a constant confining stress, the weight of the matrix block deformation for the strongly adsorbing gases is larger than that for weakly adsorbing gases. The weight values increase as the pore pressure increases. It can be concluded that the matrix block deformation is an important phenomenon for researching coal permeability and can be crucial for the prediction of CBM production due to the change in permeability.

  5. Automated Geometric Model Builder Using Range Image Sensor Data: Final Acquistion

    SciTech Connect

    Diegert, C.; Sackos, J.

    1999-02-01

    This report documents a data collection where we recorded redundant range image data from multiple views of a simple scene, and recorded accurate survey measurements of the same scene. Collecting these data was a focus of the research project Automated Geometric Model Builder Using Range Image Sensor Data (96-0384), supported by Sandia's Laboratory-Directed Research and Development (LDRD) Program during fiscal years 1996, 1997, and 1998. The data described here are available from the authors on CDROM, or electronically over the Internet. Included in this data distribution are Computer-Aided Design (CAD) models we constructed from the survey measurements. The CAD models are compatible with the SolidWorks 98 Plus system, the modern Computer-Aided Design software system that is central to Sandia's DeskTop Engineering Project (DTEP). Integration of our measurements (as built) with the constructive geometry process of the CAD system (as designed) delivers on a vision of the research project. This report on our final data collection will also serve as a final report on the project.

  6. Geometric analysis of the Goldbeter minimal model for the embryonic cell cycle.

    PubMed

    Kosiuk, Ilona; Szmolyan, Peter

    2016-04-01

    A minimal model describing the embryonic cell division cycle at the molecular level in eukaryotes is analyzed mathematically. It is known from numerical simulations that the corresponding three-dimensional system of ODEs has periodic solutions in certain parameter regimes. We prove the existence of a stable limit cycle and provide a detailed description on how the limit cycle is generated. The limit cycle corresponds to a relaxation oscillation of an auxiliary system, which is singularly perturbed and has the same orbits as the original model. The singular perturbation character of the auxiliary problem is caused by the occurrence of small Michaelis constants in the model. Essential pieces of the limit cycle of the auxiliary problem consist of segments of slow motion close to several branches of a two dimensional critical manifold which are connected by fast jumps. In addition, a new phenomenon of exchange of stability occurs at lines, where the branches of the two-dimensional critical manifold intersect. This novel type of relaxation oscillations is studied by combining standard results from geometric singular perturbation with several suitable blow-up transformations. PMID:26100376

  7. A Geometric Computational Model for Calculation of Longwall Face Effect on Gate Roadways

    NASA Astrophysics Data System (ADS)

    Mohammadi, Hamid; Ebrahimi Farsangi, Mohammad Ali; Jalalifar, Hossein; Ahmadi, Ali Reza

    2016-01-01

    In this paper a geometric computational model (GCM) has been developed for calculating the effect of longwall face on the extension of excavation-damaged zone (EDZ) above the gate roadways (main and tail gates), considering the advance longwall mining method. In this model, the stability of gate roadways are investigated based on loading effects due to EDZ and caving zone (CZ) above the longwall face, which can extend the EDZ size. The structure of GCM depends on four important factors: (1) geomechanical properties of hanging wall, (2) dip and thickness of coal seam, (3) CZ characteristics, and (4) pillar width. The investigations demonstrated that the extension of EDZ is a function of pillar width. Considering the effect of pillar width, new mathematical relationships were presented to calculate the face influence coefficient and characteristics of extended EDZ. Furthermore, taking GCM into account, a computational algorithm for stability analysis of gate roadways was suggested. Validation was carried out through instrumentation and monitoring results of a longwall face at Parvade-2 coal mine in Tabas, Iran, demonstrating good agreement between the new model and measured results. Finally, a sensitivity analysis was carried out on the effect of pillar width, bearing capacity of support system and coal seam dip.

  8. DEFORMATION DEPENDENT TUL MULTI-STEP DIRECT MODEL

    SciTech Connect

    WIENKE,H.; CAPOTE, R.; HERMAN, M.; SIN, M.

    2007-04-22

    The Multi-Step Direct (MSD) module TRISTAN in the nuclear reaction code EMPIRE has been extended in order to account for nuclear deformation. The new formalism was tested in calculations of neutron emission spectra emitted from the {sup 232}Th(n,xn) reaction. These calculations include vibration-rotational Coupled Channels (CC) for the inelastic scattering to low-lying collective levels, ''deformed'' MSD with quadrupole deformation for inelastic scattering to the continuum, Multi-Step Compound (MSC) and Hauser-Feshbach with advanced treatment of the fission channel. Prompt fission neutrons were also calculated. The comparison with experimental data shows clear improvement over the ''spherical'' MSD calculations and JEFF-3.1 and JENDL-3.3 evaluations.

  9. Patient-specific non-linear finite element modelling for predicting soft organ deformation in real-time: application to non-rigid neuroimage registration.

    PubMed

    Wittek, Adam; Joldes, Grand; Couton, Mathieu; Warfield, Simon K; Miller, Karol

    2010-12-01

    Long computation times of non-linear (i.e. accounting for geometric and material non-linearity) biomechanical models have been regarded as one of the key factors preventing application of such models in predicting organ deformation for image-guided surgery. This contribution presents real-time patient-specific computation of the deformation field within the brain for six cases of brain shift induced by craniotomy (i.e. surgical opening of the skull) using specialised non-linear finite element procedures implemented on a graphics processing unit (GPU). In contrast to commercial finite element codes that rely on an updated Lagrangian formulation and implicit integration in time domain for steady state solutions, our procedures utilise the total Lagrangian formulation with explicit time stepping and dynamic relaxation. We used patient-specific finite element meshes consisting of hexahedral and non-locking tetrahedral elements, together with realistic material properties for the brain tissue and appropriate contact conditions at the boundaries. The loading was defined by prescribing deformations on the brain surface under the craniotomy. Application of the computed deformation fields to register (i.e. align) the preoperative and intraoperative images indicated that the models very accurately predict the intraoperative deformations within the brain. For each case, computing the brain deformation field took less than 4 s using an NVIDIA Tesla C870 GPU, which is two orders of magnitude reduction in computation time in comparison to our previous study in which the brain deformation was predicted using a commercial finite element solver executed on a personal computer. PMID:20868706

  10. Effect of topographic data, geometric configuration and modeling approach on flood inundation mapping

    NASA Astrophysics Data System (ADS)

    Cook, Aaron; Merwade, Venkatesh

    2009-10-01

    SummaryTechnological aspects of producing, delivering and updating of flood hazard maps in the US have has gone through a revolutionary change through Federal Emergency Management Agency's Map Modernization program. In addition, the use of topographic information derived from Light Detection and Ranging (LIDAR) is enabling creation of relatively more accurate flood inundation maps. However, LIDAR is not available for the entire United States. Even for areas, where LIDAR data are available, the effect of other factors such as cross-section configuration in one-dimensional (1D) models, mesh resolution in two-dimensional models (2D), representation of river bathymetry, and modeling approach is not well studied or documented. The objective of this paper is to address some of these issues by comparing newly developed flood inundation maps from LIDAR data to maps that are developed using different topography, geometric description and modeling approach. The methodology involves use of six topographic datasets with different horizontal resolutions, vertical accuracies and bathymetry details. Each topographic dataset is used to create a flood inundation map for twelve different cross-section configurations using 1D HEC-RAS model, and two mesh resolutions using 2D FESWMS model. Comparison of resulting maps for two study areas (Strouds Creek in North Carolina and Brazos River in Texas) show that the flood inundation area reduces with improved horizontal resolution and vertical accuracy in the topographic data. This reduction is further enhanced by incorporating river bathymetry in topography data. Overall, the inundation extent predicted by FESWMS is smaller compared to prediction from HEC-RAS for the study areas, and that the variations in the flood inundation maps arising from different factors are smaller in FESWMS compared to HEC-RAS.

  11. Experimental Investigation of Aeroelastic Deformation of Slender Wings at Supersonic Speeds Using a Video Model Deformation Measurement Technique

    NASA Technical Reports Server (NTRS)

    Erickson, Gary E.

    2013-01-01

    A video-based photogrammetric model deformation system was established as a dedicated optical measurement technique at supersonic speeds in the NASA Langley Research Center Unitary Plan Wind Tunnel. This system was used to measure the wing twist due to aerodynamic loads of two supersonic commercial transport airplane models with identical outer mold lines but different aeroelastic properties. One model featured wings with deflectable leading- and trailing-edge flaps and internal channels to accommodate static pressure tube instrumentation. The wings of the second model were of single-piece construction without flaps or internal channels. The testing was performed at Mach numbers from 1.6 to 2.7, unit Reynolds numbers of 1.0 million to 5.0 million, and angles of attack from -4 degrees to +10 degrees. The video model deformation system quantified the wing aeroelastic response to changes in the Mach number, Reynolds number concurrent with dynamic pressure, and angle of attack and effectively captured the differences in the wing twist characteristics between the two test articles.

  12. Modelling MEMS deformable mirrors for astronomical adaptive optics

    NASA Astrophysics Data System (ADS)

    Blain, Celia

    As of July 2012, 777 exoplanets have been discovered utilizing mainly indirect detection techniques. The direct imaging of exoplanets is the next goal for astronomers, because it will reveal the diversity of planets and planetary systems, and will give access to the exoplanet's chemical composition via spectroscopy. With this spectroscopic knowledge, astronomers will be able to know, if a planet is terrestrial and, possibly, even find evidence of life. With so much potential, this branch of astronomy has also captivated the general public attention. The direct imaging of exoplanets remains a challenging task, due to (i) the extremely high contrast between the parent star and the orbiting exoplanet and (ii) their small angular separation. For ground-based observatories, this task is made even more difficult, due to the presence of atmospheric turbulence. High Contrast Imaging (HCI) instruments have been designed to meet this challenge. HCI instruments are usually composed of a coronagraph coupled with the full onaxis corrective capability of an Extreme Adaptive Optics (ExAO) system. An efficient coronagraph separates the faint planet's light from the much brighter starlight, but the dynamic boiling speckles, created by the stellar image, make exoplanet detection impossible without the help of a wavefront correction device. The Subaru Coronagraphic Extreme Adaptive Optics (SCExAO) system is a high performance HCI instrument developed at Subaru Telescope. The wavefront control system of SCExAO consists of three wavefront sensors (WFS) coupled with a 1024- actuator Micro-Electro-Mechanical-System (MEMS) deformable mirror (DM). MEMS DMs offer a large actuator density, allowing high count DMs to be deployed in small size beams. Therefore, MEMS DMs are an attractive technology for Adaptive Optics (AO) systems and are particularly well suited for HCI instruments employing ExAO technologies. SCExAO uses coherent light modulation in the focal plane introduced by the DM, for

  13. Study of optical techniques for the Ames unitary wind tunnels. Part 4: Model deformation

    NASA Technical Reports Server (NTRS)

    Lee, George

    1992-01-01

    A survey of systems capable of model deformation measurements was conducted. The survey included stereo-cameras, scanners, and digitizers. Moire, holographic, and heterodyne interferometry techniques were also looked at. Stereo-cameras with passive or active targets are currently being deployed for model deformation measurements at NASA Ames and LaRC, Boeing, and ONERA. Scanners and digitizers are widely used in robotics, motion analysis, medicine, etc., and some of the scanner and digitizers can meet the model deformation requirements. Commercial stereo-cameras, scanners, and digitizers are being improved in accuracy, reliability, and ease of operation. A number of new systems are coming onto the market.

  14. [Research progress on real-time deformable models of soft tissues for surgery simulation].

    PubMed

    Xu, Shaoping; Liu, Xiaoping; Zhang, Hua; Luo, Jie

    2010-04-01

    Biological tissues generally exhibit nonlinearity, anisotropy, quasi-incompressibility and viscoelasticity about material properties. Simulating the behaviour of elastic objects in real time is one of the current objectives of virtual surgery simulation which is still a challenge for researchers to accurately depict the behaviour of human tissues. In this paper, we present a classification of the different deformable models that have been developed. We present the advantages and disadvantages of each one. Finally, we make a comparison of deformable models and perform an evaluation of the state of the art and the future of deformable models.

  15. Modeling of sharp change in magnetic hysteresis behavior of electrical steel at small plastic deformation

    SciTech Connect

    Sablik, M.J.; Rios, S.; Landgraf, F.J.G.; Yonamine, T.; Campos, M.F. de

    2005-05-15

    In 2.2% Si electrical steel, the magnetic hysteresis behavior is sharply sheared by a rather small plastic deformation (0.5%). A modification to the Jiles-Atherton hysteresis model makes it possible to model magnetic effects of plastic deformation. In this paper, with this model, it is shown how a narrow hysteresis with an almost steplike hysteresis curve for an undeformed specimen is sharply sheared by plastic deformation. Computed coercivity and hysteresis loss show a sharp step to higher values at small strain due to an n=1/2 power law dependence on residual strain. The step is seen experimentally.

  16. Geometric-Phase approach to macroscopic polarization in lattice fermion models

    NASA Astrophysics Data System (ADS)

    Ortiz, Gerardo; Martin, Richard M.; Ordejón, Pablo

    1996-03-01

    The Geometric-Phase approach is a convenient way to calculate changes in the macroscopic polarization of an insulating system, based on the concept that the integrated current is connected to the phase of the wavefunction of interacting electrons. The method has provided a powerful mathematical scheme to study dielectric phenomena in correlated systems. We have applied these ideas to a variety of strongly correlated lattice fermion models in one and two dimensions; in particular, the 3-band Hubbard model in Cu-O planes in the parent compounds of High-Temperature superconductors. We analyze the information contained in the phase when a quantum transition takes place as one parameter of the hamiltonian is adiabatically changed. Previous results assume a correlated insulator in zero macroscopic electric field. In presence of such a singular perturbation there is no stable ground state. We present a way to overcome this problem, the main idea of which consists in constraining the manifold where the electrons move, i.e., the configuration space of the N identical particles.

  17. Properties of selected mutations and genotypic landscapes under Fisher's geometric model.

    PubMed

    Blanquart, François; Achaz, Guillaume; Bataillon, Thomas; Tenaillon, Olivier

    2014-12-01

    The fitness landscape-the mapping between genotypes and fitness-determines properties of the process of adaptation. Several small genotypic fitness landscapes have recently been built by selecting a handful of beneficial mutations and measuring fitness of all combinations of these mutations. Here, we generate several testable predictions for the properties of these small genotypic landscapes under Fisher's geometric model of adaptation. When the ancestral strain is far from the fitness optimum, we analytically compute the fitness effect of selected mutations and their epistatic interactions. Epistasis may be negative or positive on average depending on the distance of the ancestral genotype to the optimum and whether mutations were independently selected, or coselected in an adaptive walk. Simulations show that genotypic landscapes built from Fisher's model are very close to an additive landscape when the ancestral strain is far from the optimum. However, when it is close to the optimum, a large diversity of landscape with substantial roughness and sign epistasis emerged. Strikingly, small genotypic landscapes built from several replicate adaptive walks on the same underlying landscape were highly variable, suggesting that several realizations of small genotypic landscapes are needed to gain information about the underlying architecture of the fitness landscape.

  18. Geometric-model-based segmentation of the prostate and surrounding structures for image-guided radiotherapy

    NASA Astrophysics Data System (ADS)

    Tang, Xiaoli; Jeong, Yongwon; Radke, Richard J.; Chen, George T. Y.

    2004-01-01

    We present a computer vision tool to improve the clinical outcome of patients undergoing radiation therapy for prostate cancer by improving irradiation technique. While intensity modulated radiotherapy (IMRT) allows one to irradiate a specific region in the body with high accuracy, it is still difficult to know exactly where to aim the radiation beam on every day of the 30~40 treatments that are necessary. This paper presents a geometric model-based technique to accurately segment the prostate and other surrounding structures in a daily serial CT image, compensating for daily motion and shape variation. We first acquire a collection of serial CT scans of patients undergoing external beam radiotherapy, and manual segmentation of the prostate and other nearby structures by radiation oncologists. Then we train shape and local appearance models for the structures of interest. When new images are available, an iterative algorithm is applied to locate the prostate and surrounding structures automatically. Our experimental results show that excellent matches can be given to the prostate and surrounding structure. Convergence is declared after 10 iterations. For 256 x 256 images, the mean distance between the hand-segmented contour and the automatically estimated contour is about 1.5 pixels (2.44 mm), with variance about 0.6 pixel (1.24 mm).

  19. Geometric structure and geodesic in a solvable model of nonequilibrium process

    NASA Astrophysics Data System (ADS)

    Kim, Eun-jin; Lee, UnJin; Heseltine, James; Hollerbach, Rainer

    2016-06-01

    We investigate the geometric structure of a nonequilibrium process and its geodesic solutions. By employing an exactly solvable model of a driven dissipative system (generalized nonautonomous Ornstein-Uhlenbeck process), we compute the time-dependent probability density functions (PDFs) and investigate the evolution of this system in a statistical metric space where the distance between two points (the so-called information length) quantifies the change in information along a trajectory of the PDFs. In this metric space, we find a geodesic for which the information propagates at constant speed, and demonstrate its utility as an optimal path to reduce the total time and total dissipated energy. In particular, through examples of physical realizations of such geodesic solutions satisfying boundary conditions, we present a resonance phenomenon in the geodesic solution and the discretization into cyclic geodesic solutions. Implications for controlling population growth are further discussed in a stochastic logistic model, where a periodic modulation of the diffusion coefficient and the deterministic force by a small amount is shown to have a significant controlling effect.

  20. Deformation patterns and surface morphology in a minimal model of amorphous plasticity

    NASA Astrophysics Data System (ADS)

    Sandfeld, Stefan; Zaiser, Michael

    2014-03-01

    We investigate a minimal model of the plastic deformation of amorphous materials. The material elements are assumed to exhibit ideally plastic behavior (J2 plasticity). Structural disorder is considered in terms of random variations of the local yield stresses. Using a finite element implementation of this simple model, we simulate the plane strain deformation of long thin rods loaded in tension. The resulting strain patterns are statistically characterized in terms of their spatial correlation functions. Studies of the corresponding surface morphology reveal a non-trivial Hurst exponent H ≈ 0.8, indicating the presence of long-range correlations in the deformation patterns. The simulated deformation patterns and surface morphology exhibit persistent features which emerge already at the very onset of plastic deformation, while subsequent evolution is characterized by growth in amplitude without major morphology changes. The findings are compared to experimental observations.

  1. Evolving nutritional strategies in the presence of competition: a geometric agent-based model.

    PubMed

    Senior, Alistair M; Charleston, Michael A; Lihoreau, Mathieu; Buhl, Jerome; Raubenheimer, David; Simpson, Stephen J

    2015-03-01

    Access to nutrients is a key factor governing development, reproduction and ultimately fitness. Within social groups, contest-competition can fundamentally affect nutrient access, potentially leading to reproductive asymmetry among individuals. Previously, agent-based models have been combined with the Geometric Framework of nutrition to provide insight into how nutrition and social interactions affect one another. Here, we expand this modelling approach by incorporating evolutionary algorithms to explore how contest-competition over nutrient acquisition might affect the evolution of animal nutritional strategies. Specifically, we model tolerance of nutrient excesses and deficits when ingesting nutritionally imbalanced foods, which we term 'nutritional latitude'; a higher degree of nutritional latitude constitutes a higher tolerance of nutritional excess and deficit. Our results indicate that a transition between two alternative strategies occurs at moderate to high levels of competition. When competition is low, individuals display a low level of nutritional latitude and regularly switch foods in search of an optimum. When food is scarce and contest-competition is intense, high nutritional latitude appears optimal, and individuals continue to consume an imbalanced food for longer periods before attempting to switch to an alternative. However, the relative balance of nutrients within available foods also strongly influences at what levels of competition, if any, transitions between these two strategies occur. Our models imply that competition combined with reproductive skew in social groups can play a role in the evolution of diet breadth. We discuss how the integration of agent-based, nutritional and evolutionary modelling may be applied in future studies to further understand the evolution of nutritional strategies across social and ecological contexts.

  2. Evolving Nutritional Strategies in the Presence of Competition: A Geometric Agent-Based Model

    PubMed Central

    Senior, Alistair M.; Charleston, Michael A.; Lihoreau, Mathieu; Buhl, Jerome; Raubenheimer, David; Simpson, Stephen J.

    2015-01-01

    Access to nutrients is a key factor governing development, reproduction and ultimately fitness. Within social groups, contest-competition can fundamentally affect nutrient access, potentially leading to reproductive asymmetry among individuals. Previously, agent-based models have been combined with the Geometric Framework of nutrition to provide insight into how nutrition and social interactions affect one another. Here, we expand this modelling approach by incorporating evolutionary algorithms to explore how contest-competition over nutrient acquisition might affect the evolution of animal nutritional strategies. Specifically, we model tolerance of nutrient excesses and deficits when ingesting nutritionally imbalanced foods, which we term ‘nutritional latitude’; a higher degree of nutritional latitude constitutes a higher tolerance of nutritional excess and deficit. Our results indicate that a transition between two alternative strategies occurs at moderate to high levels of competition. When competition is low, individuals display a low level of nutritional latitude and regularly switch foods in search of an optimum. When food is scarce and contest-competition is intense, high nutritional latitude appears optimal, and individuals continue to consume an imbalanced food for longer periods before attempting to switch to an alternative. However, the relative balance of nutrients within available foods also strongly influences at what levels of competition, if any, transitions between these two strategies occur. Our models imply that competition combined with reproductive skew in social groups can play a role in the evolution of diet breadth. We discuss how the integration of agent-based, nutritional and evolutionary modelling may be applied in future studies to further understand the evolution of nutritional strategies across social and ecological contexts. PMID:25815976

  3. Models for rupture mechanics of plate boundaries and crustal deformation

    NASA Technical Reports Server (NTRS)

    Nur, A.

    1983-01-01

    The role of pull aparts and pushups in transcurrent systems, the rotation of faults and blocks within transcurrent fault systems, the role of accretion tectonics in plate boundary deformation, and power law creep behavior and the yielding at plate boundaries were investigated.

  4. The Definition and Computation of a Metric on Plane Curves. The Meaning of a Face on a Geometric Model

    NASA Technical Reports Server (NTRS)

    Emery, J. D.

    1985-01-01

    Two topics in topology, the comparison of plane curves and faces on geometric models, are discussed. With regard to the first problem, a curve is defined to be a locus of points without any underlying parameterization. A metric on a class of plane curves is defined, a finite computation of this metric is given for the case of piecewise linear curves, and it is shown how to approximate curves that have bounded curvature by piecewise linear curves. In this way a bound on the distance between two curves can be computed. With regard to the second problem, the questions to be discussed are under what circumstances do geometrical faces make sense; how can they be explicity defined; and when are these geometrical faces homeomorphic to the realization of the abstract (topological) face.

  5. High Strain Rate Deformation Modeling of a Polymer Matrix Composite. Part 1; Matrix Constitutive Equations

    NASA Technical Reports Server (NTRS)

    Goldberg, Robert K.; Stouffer, Donald C.

    1998-01-01

    Recently applications have exposed polymer matrix composite materials to very high strain rate loading conditions, requiring an ability to understand and predict the material behavior under these extreme conditions. In this first paper of a two part report, background information is presented, along with the constitutive equations which will be used to model the rate dependent nonlinear deformation response of the polymer matrix. Strain rate dependent inelastic constitutive models which were originally developed to model the viscoplastic deformation of metals have been adapted to model the nonlinear viscoelastic deformation of polymers. The modified equations were correlated by analyzing the tensile/ compressive response of both 977-2 toughened epoxy matrix and PEEK thermoplastic matrix over a variety of strain rates. For the cases examined, the modified constitutive equations appear to do an adequate job of modeling the polymer deformation response. A second follow-up paper will describe the implementation of the polymer deformation model into a composite micromechanical model, to allow for the modeling of the nonlinear, rate dependent deformation response of polymer matrix composites.

  6. Connections between surface complexation and geometric models of mineral dissolution investigated for rhodochrosite

    NASA Astrophysics Data System (ADS)

    Duckworth, Owen W.; Martin, Scot T.

    2003-05-01

    Mineral dissolution rates have been rationalized in the literature by surface complexation models (SCM) and morphological and geometric models (GM), and reconciliation of these conceptually different yet separately highly successful models is an important goal. In the current work, morphological alterations of the surface are observed in real time at the microscopic level by atomic force microscopy (AFM) while dissolution rates are simultaneously measured at the macroscopic level by utilizing the AFM fluid cell as a classic flow-through reactor. Rhodochrosite dissolution is studied from pH = 2 to 11 at 298 K, and quantitative agreement is found between the dissolution rates determined from microscopic and macroscopic observations. Application of a SCM model for the interpretation of the kinetic data indicates that the surface concentration of >CO 3H regulates dissolution for pH < 7 while the surface concentration of >MnOH 2+ regulates dissolution for pH > 7. A GM model explains well the microscopic observations, from which it is apparent that dissolution occurs at steps associated with anisotropic pit expansion. On the basis of the observations, we combine the SCM and GM models to propose a step-site surface complexation model (SSCM), in which the dissolution rates are quantitatively related to the surface chemical speciation of steps. The governing SSCM equation is as follows: R = χ 1/2( k co + k ca)[>CO 3H] + χ 1/2( k mo + k ma)[>MnOH 2+ ], where R is the dissolution rate (mol m -2 s -1), 2χ 1/2 is the fraction of surface sites located at steps, [>CO 3H] and [>MnOH 2+ ] are surface concentrations (mol m -2), and k co, k ca, k mo, and k ma are the respective dissolution rate coefficients (s -1) for the >CO 3H and the >MnOH 2+ surface species on obtuse and acute steps. We find k co = 2.7 s -1, k ca = 2.1 × 10 -1 s -1, k mo = 4.1 × 10 -2 s -1, k ma = 3.7 × 10 -2 s -1, and χ 1/2 = 0.015 ± 0.005. The rate coefficients quantify the net result of complex surface

  7. Interdisciplinary development of smart systems with functional and geometrical modeling techniques

    NASA Astrophysics Data System (ADS)

    Kuemmel, Martin A.; Henke, Andreas; Wallaschek, Joerg

    1999-06-01

    The functionality of modern products is increased by the distinct interaction of mechanics, electronics, control engineering and computer science. Simultaneously the life cycles of such smart and often called mechatronic systems are becoming shorter. Thus it becomes more difficult to minimize development time and cost. The development process can be improved significantly by using interdisciplinary development methods and tools. However, all existing design strategies of the participating disciplines are ineligible. Either the strategies are domain specific or they are insufficient for the development of mechatronic systems. In addition, software tools, involved persons and organization structures are often not regarded. This paper suggests a new strategy for the development of mechatronic systems that tempts to meet five major challenges: simultaneous engineering, integration of shape and function, virtual prototyping, experimental validation and computer aided engineering. It considers the development process from the product idea to the first functioning prototype and combines functional and geometrical modeling techniques. The strategy bases on established strategies and our experiences in the development of wire bonding machines, which are used in semiconductor manufacturing. The development of an exemplary subsystem is resumed.

  8. Formation enthalpies of Al-Fe-Zr-Nd system calculated by using geometric and Miedema's models

    NASA Astrophysics Data System (ADS)

    Zhang, Lei; Wang, Rongcheng; Tao, Xiaoma; Guo, Hui; Chen, Hongmei; Ouyang, Yifang

    2015-04-01

    Formation enthalpy is important for the phase stability and amorphous forming ability of alloys. The formation enthalpies of Fe17RE2 (RE=Ce, Pr, Nd, Gd and Er) obtained by Miedema's theory are in good agreement with those of the experiments. The dependence of formation enthalpy on concentration of Al for intermetallic (AlxFe1-x)17Nd2 have been calculated by Miedema's theory and the geometric model. The solid solubility of Al in (AlxFe1-x)17Nd2 is coincident with the concentration dependence of formation enthalpy. The mixing enthalpies of liquid alloys and formation enthalpies of alloys for Al-Fe-Zr-Nd system have been predicted. The calculated mixing enthalpy indicates that the adding of Fe or Nd decreases monotonously the magnitude of enthalpy. The formation enthalpies of Al-Fe-Zr-Nd system indicate that the shape of the enthalpy contour map changes when the content of Al is less than 50.0 at% and then it remains unchanged except the decrease of magnitude. The formation enthalpy of Al-Fe-Zr-Nd increases with the increase of Fe and/or Nd content. The negative formation enthalpy indicates that Al-Fe-Zr-Nd system has higher amorphous forming ability and wide amorphous forming range. The certain contents of Zr and/or Al are beneficial for the formation of Al-Fe-Zr-Nd intermetallics.

  9. Geometrical mutual information at the tricritical point of the two-dimensional Blume-Capel model

    NASA Astrophysics Data System (ADS)

    Mandal, Ipsita; Inglis, Stephen; Melko, Roger G.

    2016-07-01

    The spin-1 classical Blume-Capel model on a square lattice is known to exhibit a finite-temperature phase transition described by the tricritical Ising CFT in 1  +  1 space-time dimensions. This phase transition can be accessed with classical Monte Carlo simulations, which, via a replica-trick calculation, can be used to study the shape-dependence of the classical Rényi entropies for a torus divided into two cylinders. From the second Rényi entropy, we calculate the geometrical mutual information (GMI) introduced by Stéphan et al (2014 Phys. Rev. Lett. 112 127204) and use it to extract a numerical estimate for the value of the central charge near the tricritical point. By comparing to the known CFT result, c  =  7/10, we demonstrate how this type of GMI calculation can be used to estimate the position of the tricritical point in the phase diagram.

  10. Learning deformation model for expression-robust 3D face recognition

    NASA Astrophysics Data System (ADS)

    Guo, Zhe; Liu, Shu; Wang, Yi; Lei, Tao

    2015-12-01

    Expression change is the major cause of local plastic deformation of the facial surface. The intra-class differences with large expression change somehow are larger than the inter-class differences as it's difficult to distinguish the same individual with facial expression change. In this paper, an expression-robust 3D face recognition method is proposed by learning expression deformation model. The expression of the individuals on the training set is modeled by principal component analysis, the main components are retained to construct the facial deformation model. For the test 3D face, the shape difference between the test and the neutral face in training set is used for reconstructing the expression change by the constructed deformation model. The reconstruction residual error is used for face recognition. The average recognition rate on GavabDB and self-built database reaches 85.1% and 83%, respectively, which shows strong robustness for expression changes.

  11. Using GPS loading deformation to distinguish different hydrological measurements and models

    NASA Astrophysics Data System (ADS)

    Fu, Y.; van Dam, T. M.

    2015-12-01

    The earth's lithosphere is deformed elastically by seasonal and inter-annual surface mass variations. The Global Positioning System (GPS) accurately measures 3D crustal deformation caused by surface hydrological mass movements. In this study, we calculate the loading deformation using different hydrological models and in-situ hydrological measurements, and compare those modeled results with actual deformation measurements of the dense GPS network in United States and Europe. Therefore, GPS can be used as an independent tool to evaluate the differences between hydrological measurements and models. We are particularly interested in comparing the snow volume differences between in-situ snow measurement (such as SNOTEL) and the snow components of simulated models (such as GLDAS or NLDAS). We, therefore, demonstrate that GPS as a geodetic observation can provide valuable information for hydrological studies.

  12. Geometrically centered region: a "wet" model of protein binding hot spots not excluding water molecules.

    PubMed

    Li, Zhenhua; Li, Jinyan

    2010-12-01

    A protein interface can be as "wet" as a protein surface in terms of the number of immobilized water molecules. This important water information has not been explicitly taken by computational methods to model and identify protein binding hot spots, overlooking the water role in forming interface hydrogen bonds and in filing cavities. Hot spot residues are usually clustered at the core of the protein binding interfaces. However, traditional machine learning methods often identify the hot spot residues individually, breaking the cooperativity of the energetic contribution. Our idea in this work is to explore the role of immobilized water and meanwhile to capture two essential properties of hot spots: the compactness in contact and the far distance from bulk solvent. Our model is named geometrically centered region (GCR). The detection of GCRs is based on novel tripartite graphs, and atom burial levels which are a concept more intuitive than SASA. Applying to a data set containing 355 mutations, we achieved an F measure of 0.6414 when ΔΔG ≥ 1.0 kcal/mol was used to define hot spots. This performance is better than Robetta, a benchmark method in the field. We found that all but only one of the GCRs contain water to a certain degree, and most of the outstanding hot spot residues have water-mediated contacts. If the water is excluded, the burial level values are poorly related to the ΔΔG, and the model loses its performance remarkably. We also presented a definition for the O-ring of a GCR as the set of immediate neighbors of the residues in the GCR. Comparative analysis between the O-rings and GCRs reveals that the newly defined O-ring is indeed energetically less important than the GCR hot spot, confirming a long-standing hypothesis. PMID:20818601

  13. A low-dimensional deformation model for cancer cells in flow.

    PubMed

    Lee, A M; Berny-Lang, M A; Liao, S; Kanso, E; Kuhn, P; McCarty, O J T; Newton, P K

    2012-08-01

    A low-dimensional parametric deformation model of a cancer cell under shear flow is developed. The model is built around an experiment in which MDA-MB-231 adherent cells are subjected to flow with increasing shear. The cell surface deformation is imaged using differential interference contrast microscopy imaging techniques until the cell releases into the flow. We post-process the time sequence of images using an active shape model from which we obtain the principal components of deformation. These principal components are then used to obtain the parameters in an empirical constitutive equation determining the cell deformations as a function of the fluid normal and shear forces imparted. The cell surface is modeled as a 2D Gaussian interface which can be deformed with three active parameters: H (height), σ(x) (x-width), and σ(y) (y-width). Fluid forces are calculated on the cell surface by discretizing the surface with regularized Stokeslets, and the flow is driven by a stochastically fluctuating pressure gradient. The Stokeslet strengths are obtained so that viscous boundary conditions are enforced on the surface of the cell and the surrounding plate. We show that the low-dimensional model is able to capture the principal deformations of the cell reasonably well and argue that active shape models can be exploited further as a useful tool to bridge the gap between experiments, models, and numerical simulations in this biological setting.

  14. Modeling of transient deformation of piezoelectric ceramics [US NDE].

    PubMed

    Lanceleur, P; de Belleval, J F; Mercier, N

    1992-01-01

    A method based on a finite-element analysis that permits the calculation and the visualization of deformations of ultrasonic transducers, in different configurations is presented. The method uses a Fourier series synthesis giving deformation of the free surface and electrical admittance for wide frequency bands by the use of finite-element procedures previously developed at Universite de Technologie de Compiegne (UTC). The method was originally developed for the monochromatic case. The authors report on the adaptation and validation of the method for the multifrequency excitation case, which is a more realistic approach used in the field of ultrasonic NDE. Several geometries were tested. In spite of the limitations of the method, due to the calculation requirements, the results show the role of the radial displacement behavior usually neglected in monodimensional analysis.

  15. Modeling for deformable mirrors and the adaptive optics optimization program

    SciTech Connect

    Henesian, M.A.; Haney, S.W.; Trenholme, J.B.; Thomas, M.

    1997-03-18

    We discuss aspects of adaptive optics optimization for large fusion laser systems such as the 192-arm National Ignition Facility (NIF) at LLNL. By way of example, we considered the discrete actuator deformable mirror and Hartmann sensor system used on the Beamlet laser. Beamlet is a single-aperture prototype of the 11-0-5 slab amplifier design for NIF, and so we expect similar optical distortion levels and deformable mirror correction requirements. We are now in the process of developing a numerically efficient object oriented C++ language implementation of our adaptive optics and wavefront sensor code, but this code is not yet operational. Results are based instead on the prototype algorithms, coded-up in an interpreted array processing computer language.

  16. An Ultrasound-Driven Kinematic Model for Deformation of the Infarcted Mouse Left Ventricle Incorporating A Near-Incompressibility Constraint

    PubMed Central

    Lin, Dan; French, Brent A.; Xu, Yaqin; Hossack, John A.; Holmes, Jeffrey W.

    2014-01-01

    Mathematical models of varying complexity have proved useful in fitting and interpreting regional cardiac displacements obtained from imaging methods such as ultrasound speckle tracking or MRI tagging. Simpler models, such as the classic thick-walled cylinder model of the left ventricle (LV), solve quickly and are easy to implement, but they ignore regional geometric variations and are difficult to adapt to the study of regional pathologies such as myocardial infarction. Complex, anatomically accurate finite-element models work well but are computationally intensive and require specialized expertise to implement. We developed a kinematic model that offers a compromise between these two traditional approaches, assuming only that displacements in the left ventricle are polynomial functions of initial position and that the myocardium is nearly incompressible, while allowing myocardial motion to vary spatially as would be expected in an ischemic or dyssynchronous left ventricle. Model parameters were determined using an objective function with adjustable weights to account for confidence in individual displacement components and desired strength of the incompressibility constraint. The model accurately represented the motion of both normal and infarcted mouse left ventricles during the cardiac cycle, with normalized root mean square errors in predicted deformed positions of 8.2 ± 2.3% and 7.4 ± 2.1% for normal and infarcted hearts, respectively. PMID:25542490

  17. Predictive Model for Temperature-Induced Deformation of Robot Mechanical Systems

    NASA Astrophysics Data System (ADS)

    Poonyapak, Pranchalee

    The positioning accuracy and repeatability of a robot are critical for many industrial applications. Drift in repeatability can occur with changes in environmental and internal conditions, such as those seen with temperature-induced deformation. Thermal instability causes dimensional deformation, and a warm-up cycle is typically required to bring the robot to a thermally stable working condition. The elimination of warm-up cycles will ultimately enhance the positioning accuracy of the robots, their productivity, and reduce unnecessary energy consumption. The main objective of this research was to develop a robot controller algorithm that would provide, a priori, compensation for temperature-induced deformation associated with warm-up in robot mechanical systems. The research started at the fundamental stage of gaining insight into the thermal behaviour and corresponding temperature-induced deformation of simplified, i.e., one-dimensional, robot mechanical systems consisting of slender links and heat sources. The systems were studied using concomitant experimental, numerical and analytical models to provide cross-checking of the results. For the experimental model, the deformation was measured by tracking the drift of a laser diode spot across a charge-coupled device (CCD) camera chip. A non-contact measurement system consisting of an infrared camera, a CCD camera and a laser diode was developed to provide high accuracy measurement for the deformation. The numerical model was generated with a coupled thermal-mechanical finite element analysis incorporating thermal effects due to conduction and convection. The models were tested with the analytical model that was further extended using a finite difference technique. Once the three models showed excellent agreement, it was possible to develop a controller algorithm. Deformations predicted by the finite difference model were used as input for a validation experiment of the compensation algorithm. Results of the

  18. Geometrical Optics

    NASA Astrophysics Data System (ADS)

    Lindlein, Norbert; Leuchs, Gerd

    This chapter shall discuss the basics and the applications of geometrical optical methods in modern optics. Geometrical optics has a long tradition and some ideas are many centuries old. Nevertheless, the invention of modern personal computers which can perform several million floating-point operations in a second also revolutionized the methods of geometrical optics and so several analytical methods lost importance whereas numerical methods such as ray tracing became very important. Therefore, the emphasis in this chapter is also on modern numerical methods such as ray tracing and some other systematic methods such as the paraxial matrix theory.

  19. All-loop correlators of integrable λ-deformed σ-models

    NASA Astrophysics Data System (ADS)

    Georgiou, George; Sfetsos, Konstantinos; Siampos, Konstantinos

    2016-08-01

    We compute the 2- and 3-point functions of currents and primary fields of λ-deformed integrable σ-models characterized also by an integer k. Our results apply for any semisimple group G, for all values of the deformation parameter λ and up to order 1 / k. We deduce the OPEs and equal-time commutators of all currents and primaries. We derive the currents' Poisson brackets which assume Rajeev's deformation of the canonical structure of the isotropic PCM, the underlying structure of the integrable λ-deformed σ-models. We also present analogous results in two limiting cases of special interest, namely for the non-Abelian T-dual of the PCM and for the pseudodual model.

  20. Modeling photosynthesis of discontinuous plant canopies by linking the Geometric Optical Radiative Transfer model with biochemical processes

    NASA Astrophysics Data System (ADS)

    Xin, Q.; Gong, P.; Li, W.

    2015-06-01

    Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT) model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP) for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily timescales. We demonstrate that ambient CO2 concentrations influence daytime vegetation photosynthesis, which needs to be considered in biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.

  1. Development of patient-specific biomechanical models for predicting large breast deformation.

    PubMed

    Han, Lianghao; Hipwell, John H; Tanner, Christine; Taylor, Zeike; Mertzanidou, Thomy; Cardoso, Jorge; Ourselin, Sebastien; Hawkes, David J

    2012-01-21

    Physically realistic simulations for large breast deformation are of great interest for many medical applications such as cancer diagnosis, image registration, surgical planning and image-guided surgery. To support fast, large deformation simulations of breasts in clinical settings, we proposed a patient-specific biomechanical modelling framework for breasts, based on an open-source graphics processing unit-based, explicit, dynamic, nonlinear finite element (FE) solver. A semi-automatic segmentation method for tissue classification, integrated with a fully automated FE mesh generation approach, was implemented for quick patient-specific FE model generation. To solve the difficulty in determining material parameters of soft tissues in vivo for FE simulations, a novel method for breast modelling, with a simultaneous material model parameter optimization for soft tissues in vivo, was also proposed. The optimized deformation prediction was obtained through iteratively updating material model parameters to maximize the image similarity between the FE-predicted MR image and the experimentally acquired MR image of a breast. The proposed method was validated and tested by simulating and analysing breast deformation experiments under plate compression. Its prediction accuracy was evaluated by calculating landmark displacement errors. The results showed that both the heterogeneity and the anisotropy of soft tissues were essential in predicting large breast deformations under plate compression. As a generalized method, the proposed process can be used for fast deformation analyses of soft tissues in medical image analyses and surgical simulations. PMID:22173131

  2. Internal phase transition induced by external forces in Finsler geometric model for membranes

    NASA Astrophysics Data System (ADS)

    Koibuchi, Hiroshi; Shobukhov, Andrey

    2016-10-01

    In this paper, we numerically study an anisotropic shape transformation of membranes under external forces for two-dimensional triangulated surfaces on the basis of Finsler geometry. The Finsler metric is defined by using a vector field, which is the tangential component of a three-dimensional unit vector σ corresponding to the tilt or some external macromolecules on the surface of disk topology. The sigma model Hamiltonian is assumed for the tangential component of σ with the interaction coefficient λ. For large (small) λ, the surface becomes oblong (collapsed) at relatively small bending rigidity. For the intermediate λ, the surface becomes planar. Conversely, fixing the surface with the boundary of area A or with the two-point boundaries of distance L, we find that the variable σ changes from random to aligned state with increasing of A or L for the intermediate region of λ. This implies that an internal phase transition for σ is triggered not only by the thermal fluctuations, but also by external mechanical forces. We also find that the frame (string) tension shows the expected scaling behavior with respect to A/N (L/N) at the intermediate region of A (L) where the σ configuration changes between the disordered and ordered phases. Moreover, we find that the string tension γ at sufficiently large λ is considerably smaller than that at small λ. This phenomenon resembles the so-called soft-elasticity in the liquid crystal elastomer, which is deformed by small external tensile forces.

  3. Modeling of porous scaffold deformation induced by medium perfusion.

    PubMed

    Podichetty, Jagdeep T; Madihally, Sundararajan V

    2014-05-01

    In this study, we tested the possibility of calculating permeability of porous scaffolds utilized in soft tissue engineering using pore size and shape. We validated the results using experimental measured pressure drop and simulations with the inclusion of structural deformation. We prepared Polycaprolactone (PCL) and Chitosan-Gelatin (CG) scaffolds by salt leaching and freeze drying technique, respectively. Micrographs were assessed for pore characteristics and mechanical properties. Porosity for both scaffolds was nearly same but the permeability varied 10-fold. Elastic moduli were 600 and 9 kPa for PCL and CG scaffolds, respectively, while Poisson's ratio was 0.3 for PCL scaffolds and ∼1.0 for CG scaffolds. A flow-through bioreactor accommodating a 10 cm diameter and 0.2 cm thick scaffold was used to determine the pressure-drop at various flow rates. Additionally, computational fluid dynamic (CFD) simulations were performed by coupling fluid flow, described by Brinkman equation, with structural mechanics using a dynamic mesh. The experimentally obtained pressure drop matched the simulation results of PCL scaffolds. Simulations were extended to a broad range of permeabilities (10(-10) m(2) to 10(-14) m(2) ), elastic moduli (10-100,000 kPa) and Poisson's ratio (0.1-0.49). The results showed significant deviation in pressure drop due to scaffold deformation compared to rigid scaffold at permeabilities near healthy tissues. Also, considering the scaffold as a nonrigid structure altered the shear stress profile. In summary, scaffold permeability can be calculated using scaffold pore characteristics and deformation could be predicted using CFD simulation. These relationships could potentially be used in monitoring tissue regeneration noninvasively via pressure drop. PMID:24259467

  4. Taking latitude with Ptolemy: Jamshid al-Kashi's novel geometric model of the motions of the inferior planets

    NASA Astrophysics Data System (ADS)

    van Brummelen, Glen

    2006-07-01

    In terms of complexity, planetary latitudes are the culmination of Ptolemy's mathematical astronomy. Al-Kashi's remarkable system removes its mathematical flaws, and demonstrates that Muslim astronomers not only mastered this apex of Ptolemaic astronomy, but also perfected its mathematics. The remainder of this paper is devoted first to a brief description of the mathematics of Ptolemy's latitude model, and then to a technical account of the part of the Khaqani Zij devoted to al-Kashi's spherical approach. Al-Kashi's text falls roughly into three sections: a geometrical description of the spherical model, a mathematical discussion of how one might generate planetary positions from it, and a sample calculation for Venus. A translation by Sergei Tourkin of the passage in which al-Kashi describes the geometric structure of his model may be found in an appendix.

  5. A Mechanism-based Model for Deformation Twinning in Polycrystalline FCC Steel

    SciTech Connect

    Wang, Yuan; Sun, Xin; Wang, Y. D.; Hu, Xiaohua; Zbib, Hussein M.

    2014-06-01

    Deformation twinning, a common and important plastic deformation mechanism, is the key contributor to the excellent combination of strength and ductility in twinning-induced plasticity (TWIP) steel. In the open literature, a significant amount of research has been reported on the microstructural characteristics of deformation twinning and its influence on the overall deformation behavior of TWIP steel. In this study, we examine the feasibility of a mechanism-based crystal plasticity model in simulating the microstructural level deformation characteristics of TWIP steel. To this end, a model considering both double-slip and double-twin is developed to investigate the stress-strain behavior and local microstructural features related to the formation and growth of micro-twins in low stacking fault energy (SFE) TWIP steel. The twin systems are described as pseudo-slips that can be activated when their resolved shear stress reaches the corresponding critical value. A hardening law that accounts for the interaction among the slip and twin systems is also developed. Numerical simulations for dDifferent mesh sizes and single crystal patch tests under different loading modes are carried out to verify the modeling procedure. Our simulation results reveal that, despite its simple nature, the double-slip/double-twin model can capture the key deformation features of TWIP steel, including twin volume fraction evolution, continuous strain hardening, and the final fracture in the form of strain localization.

  6. Deformation of the UI-14at%Nb shape memory alloy: experiments and modeling

    SciTech Connect

    Field, Robert D; Tome, Carlos N; Mc Cabe, Rodney J; Clarke, Amy J; Brown, Donald W; Tupper, Catherine N

    2010-12-22

    U-14at%Nb is a shape memory effect (SME) alloy that undergoes deformation by the motion of complex twins and twin related lath boundaries up to the limit of SME deformation ({approx}7%). All of the twins present in the as-transformed martensite and active during SME deformation are derived from those of the orthorhombic alpha-U phase, modified for the monoclinic distortion of the alpha martensite phase. In the SME regime a simple Bain strain model qualitatively predicts variant selection, texture development in polycrystalline samples, and stress-strain behavior as a function of parent phase orientation in single crystal micropillars. In the post-SME regime, unrecoverable deformation occurs by a combination of slip and twinning, with the first few percent of strain in tension apparently governed by a twin species specifically associated with the monoclinic distortion (i.e. not present in the orthorhombic alpha-U phase). The situation in compression is more complicated, with a combination of slip and twinning systems believed responsible for deformation. A review of the Bain strain model for SME deformation will be presented in conjunction with experimental data. In addition, results from modeling of post-SME behavior using the Visco-Plastic Self-Consistent (VPSC) model will be compared to experimental texture measurements.

  7. Modeling of the Deformation of Living Cells Induced by Atomic Force Microscopy

    SciTech Connect

    Rudd, R E; McElfresh, M; Baesu, E; Balhorn, R; Allen, M J; Belak, J

    2001-12-21

    We describe finite element modeling of the deformation of living cells by atomic force microscopy (AFM). Cells are soft systems, susceptible to large deformations in the course of an AFM measurement. Often the local properties, the subject of the measurement, are obscured by the response of the cell as a whole. The Lagrangian finite deformation model we have developed and implemented in finite elements analysis offers a solution to this problem. The effect of the gross deformation of the cell can be subtracted from the experimentally measured data in order to give a reproducible value for local properties. This facilitates concurrent experimental efforts to measure the mechanical properties at specific receptor sites on the membrane of a living cell.

  8. Discrete element modeling of rock deformation, fracture network development and permeability evolution under hydraulic stimulation

    SciTech Connect

    Shouchun Deng; Robert Podgorney; Hai Huang

    2011-02-01

    Key challenges associated with the EGS reservoir development include the ability to reliably predict hydraulic fracturing and the deformation of natural fractures as well as estimating permeability evolution of the fracture network with time. We have developed a physics-based rock deformation and fracture propagation simulator by coupling a discrete element model (DEM) for fracturing with a network flow model. In DEM model, solid rock is represented by a network of discrete elements (often referred as particles) connected by various types of mechanical bonds such as springs, elastic beams or bonds that have more complex properties (such as stress-dependent elastic constants). Fracturing is represented explicitly as broken bonds (microcracks), which form and coalesce into macroscopic fractures when external and internal load is applied. The natural fractures are represented by a series of connected line segments. Mechanical bonds that intersect with such line segments are removed from the DEM model. A network flow model using conjugate lattice to the DEM network is developed and coupled with the DEM. The fluid pressure gradient exerts forces on individual elements of the DEM network, which therefore deforms the mechanical bonds and breaks them if the deformation reaches a prescribed threshold value. Such deformation/fracturing in turn changes the permeability of the flow network, which again changes the evolution of fluid pressure, intimately coupling the two processes. The intimate coupling between fracturing/deformation of fracture networks and fluid flow makes the meso-scale DEM- network flow simulations necessary in order to accurately evaluate the permeability evolution, as these methods have substantial advantages over conventional continuum mechanical models of elastic rock deformation. The challenges that must be overcome to simulate EGS reservoir stimulation, preliminary results, progress to date and near future research directions and opportunities will be

  9. Differences between the deformed-potential and folding-model descriptions of inelastic nuclear scattering

    SciTech Connect

    Hnizdo, V. )

    1994-08-01

    The differences between the deformed-potential and folding-model descriptions of inelastic nuclear scattering, attention to which has been called recently by Beene, Horen, and Satchler [Phys. Rev. C 48, 3128 (1993)], were pointed out already some time ago by contrasting the rules of equal deformation lengths and equal normalized multipole moments for the optical potential and the underlying nucleon distribution of the excited nucleus.

  10. Kinematic evolution of thrusts wedge and erratic line length balancing: insights from deformed sandbox models

    NASA Astrophysics Data System (ADS)

    Ahmad, Mohammad Irfan; Dubey, A. K.; Toscani, Giovanni; Bonini, Lorenzo; Seno, Silvio

    2014-01-01

    Kinematic evolution of fold-thrust structures has been investigated by analogue models that include syntectonic sedimentation. Different decollement dips and basement thicknesses produced different wedge geometries and propagating characteristics. A model with one decollement level was characterized by a closely spaced thrust system during early stages of shortening as compared to the late stages. The frequency of fault nucleation was rapid during the early stages of deformation. Conversely, the frequency of fault nucleation was low and thrust spacing was significantly wider in a model with two decollement levels. Individual faults became locked at steep dips and deformation stepped forward as a new fault nucleated in-sequence in front of the older locked structure. Once the thrust system was established up to 27 % overall shortening, an overlying bed was introduced to simulate syntectonic deformation. Model sand wedge did not grow self similarly but rather its length and height increased episodically with deformation. Restoration of deformed models show that layer parallel shortening accommodated for approximately half of the total model shortening across the multilayers. Calculated error in apparent layer shortening from the restored layers revealed a direct relation with depth of the layers in the models. The experimental results are comparable to a natural example from the Northern Apennines fold-and-thrust belts.

  11. A kidney deformation model for use in non-rigid registration during image-guided surgery

    NASA Astrophysics Data System (ADS)

    Ong, Rowena E.; Herrell, S. Duke, III; Miga, Michael I.; Galloway, Robert L., Jr.

    2008-03-01

    In order to facilitate the removal of tumors during partial nephrectomies, an image-guided surgery system may be useful. This system would require a registration of the physical kidney to a pre-operative image volume; however, it is unclear whether a rigid registration would be sufficient. One possible source of non-rigid deformation is the clamping of the renal artery during surgery and the subsequent loss of pressure as the kidney is punctured and blood loss occurs. To explore this issue, a model of kidney deformation due to loss of perfusion and pressure was developed based on Biot's consolidation model. The model was tested on two resected porcine kidneys in which the renal artery and vein were clamped. CT image volumes of the kidney were obtained before and after the deformation caused unclamping, and fiducial markers embedded on the kidney surface allowed the deformation to be tracked. The accuracy of the kidney model was accessed by calculating the model error at the fiducial locations and using image similarity measures. Preliminary results indicate that the model may be useful in a non-rigid registration scheme; however, further refinements to the model may be necessary to better simulate the deformation due to loss of perfusion and pressure.

  12. Material Properties from Air Puff Corneal Deformation by Numerical Simulations on Model Corneas

    PubMed Central

    Dorronsoro, Carlos; de la Hoz, Andrés; Marcos, Susana

    2016-01-01

    Objective To validate a new method for reconstructing corneal biomechanical properties from air puff corneal deformation images using hydrogel polymer model corneas and porcine corneas. Methods Air puff deformation imaging was performed on model eyes with artificial corneas made out of three different hydrogel materials with three different thicknesses and on porcine eyes, at constant intraocular pressure of 15 mmHg. The cornea air puff deformation was modeled using finite elements, and hyperelastic material parameters were determined through inverse modeling, minimizing the difference between the simulated and the measured central deformation amplitude and central-peripheral deformation ratio parameters. Uniaxial tensile tests were performed on the model cornea materials as well as on corneal strips, and the results were compared to stress-strain simulations assuming the reconstructed material parameters. Results The measured and simulated spatial and temporal profiles of the air puff deformation tests were in good agreement (< 7% average discrepancy). The simulated stress-strain curves of the studied hydrogel corneal materials fitted well the experimental stress-strain curves from uniaxial extensiometry, particularly in the 0–0.4 range. Equivalent Young´s moduli of the reconstructed material properties from air-puff were 0.31, 0.58 and 0.48 MPa for the three polymer materials respectively which differed < 1% from those obtained from extensiometry. The simulations of the same material but different thickness resulted in similar reconstructed material properties. The air-puff reconstructed average equivalent Young´s modulus of the porcine corneas was 1.3 MPa, within 18% of that obtained from extensiometry. Conclusions Air puff corneal deformation imaging with inverse finite element modeling can retrieve material properties of model hydrogel polymer corneas and real corneas, which are in good correspondence with those obtained from uniaxial extensiometry

  13. Numerical models of caldera deformation: Effects of multiphase and multicomponent hydrothermal fluid flow

    USGS Publications Warehouse

    Hutnak, M.; Hurwitz, S.; Ingebritsen, S.E.; Hsieh, P.A.

    2009-01-01

    Ground surface displacement (GSD) in large calderas is often interpreted as resulting from magma intrusion at depth. Recent advances in geodetic measurements of GSD, notably interferometric synthetic aperture radar, reveal complex and multifaceted deformation patterns that often require complex source models to explain the observed GSD. Although hydrothermal fluids have been discussed as a possible deformation agent, very few quantitative studies addressing the effects of multiphase flow on crustal mechanics have been attempted. Recent increases in the power and availability of computing resources allow robust quantitative assessment of the complex time-variant thermal interplay between aqueous fluid flow and crustal deformation. We carry out numerical simulations of multiphase (liquid-gas), multicomponent (H 2O-CO2) hydrothermal fluid flow and poroelastic deformation using a range of realistic physical parameters and processes. Hydrothermal fluid injection, circulation, and gas formation can generate complex, temporally and spatially varying patterns of GSD, with deformation rates, magnitudes, and geometries (including subsidence) similar to those observed in several large calderas. The potential for both rapid and gradual deformation resulting from magma-derived fluids suggests that hydrothermal fluid circulation may help explain deformation episodes at calderas that have not culminated in magmatic eruption.

  14. Circumventing Imprecise Geometric Information and Development of a Unified Modeling Technique for Various Flow Regimes in Capillary Tubes

    NASA Astrophysics Data System (ADS)

    Abbasi, Bahman

    2012-11-01

    Owing to their manufacturability and reliability, capillary tubes are the most common expansion devices in household refrigerators. Therefore, investigating flow properties in the capillary tubes is of immense appeal in the said business. The models to predict pressure drop in two-phase internal flows invariably rely upon highly precise geometric information. The manner in which capillary tubes are manufactured makes them highly susceptible to geometric imprecisions, which renders geometry-based models unreliable to the point of obsoleteness. Aware of the issue, manufacturers categorize capillary tubes based on Nitrogen flow rate through them. This categorization method presents an opportunity to substitute geometric details with Nitrogen flow data as the basis for customized models. The simulation tools developed by implementation of this technique have the singular advantage of being applicable across flow regimes. Thus the error-prone process of identifying compatible correlations is eliminated. Equally importantly, compressibility and chocking effects can be incorporated in the same model. The outcome is a standalone correlation that provides accurate predictions, regardless of any particular fluid or flow regime. Thereby, exploratory investigations for capillary tube design and optimization are greatly simplified. Bahman Abbasi, Ph.D., is Lead Advanced Systems Engineer at General Electric Appliances in Louisville, KY. He conducts research projects across disciplines in the household refrigeration industry.

  15. Morphometric evolution of volcanic edifices related to growth and deformation: insights from analogue models

    NASA Astrophysics Data System (ADS)

    Grosse, Pablo; Yagupsky, Daniel; Winocur, Diego

    2014-05-01

    In order to evaluate the effects of growth and deformation (both separately and jointly) on volcano shape evolution, we performed a set of analogue experiments simulating these processes. The models consist of an initial symmetrical cone of 3 to 6 cm height composed of a mixture of quartz sand and plaster (cohesion of 100 to 300 Pa). Deformation was simulated through the relative motion of two underlying plates, generating a dextral E-W transcurrent fault. Growth was simulated through sedimentation of loads of granular material. For experiments simulating a fixed emission point, sedimentation was done on the same central point, whereas for experiments simulating variable emission points, sedimentation was done at the location of extrusion of corn syrup (pure and water-diluted, viscosities of 2 to 20 Pa.s) injected at the cone base, modeling magma intrusion. The experiments were documented by photographs and topographic scans, from which digital elevation models were constructed and used to calculate morphometric parameters. Five types of experiments were performed: -1. Deformation without growth (the initial cone is deformed by the E-W fault): the edifice elongates ENE-WSW, sub-perpendicular to σ1; a large graben forms at the summit region; the height/width ratio (H/W) strongly decreases. -2. Fixed-location growth without deformation (sedimentation on top of the initial cone): the edifice maintains its symmetrical, circular and regular shape, only size increases. -3. Variable-location growth without deformation (cycles of injection and sedimentation at the extrusion location): location of extrusions are variable, both within and between experiments; edifices are strongly irregular; elongation values and directions vary; H/W is maintained or decreases slightly. -4. Fixed-location growth with deformation (the initial cone is deformed by the fault and sedimentation is done on a central point): as with type (1) models, the cone elongates ENE-WSW and the central graben

  16. Crista egregia: a geometrical model of the crista ampullaris, a sensory surface that detects head rotations.

    PubMed

    Marianelli, Prisca; Berthoz, Alain; Bennequin, Daniel

    2015-02-01

    The crista ampullaris is the epithelium at the end of the semicircular canals in the inner ear of vertebrates, which contains the sensory cells involved in the transduction of the rotational head movements into neuronal activity. The crista surface has the form of a saddle, or a pair of saddles separated by a crux, depending on the species and the canal considered. In birds, it was described as a catenoid by Landolt et al. (J Comp Neurol 159(2):257-287, doi: 10.1002/cne.901590207 , 1972). In the present work, we establish that this particular form results from principles of invariance maximization and energy minimization. The formulation of the invariance principle was inspired by Takumida (Biol Sci Space 15(4):356-358, 2001). More precisely, we suppose that in functional conditions, the equations of linear elasticity are valid, and we assume that in a certain domain of the cupula, in proximity of the crista surface, (1) the stress tensor of the deformed cupula is invariant under the gradient of the pressure, (2) the dissipation of energy is minimum. Then, we deduce that in this domain the crista surface is a minimal surface and that it must be either a planar, or helicoidal Scherk surface, or a piece of catenoid, which is the unique minimal surface of revolution. If we add the hypothesis that the direction of invariance of the stress tensor is unique and that a bilateral symmetry of the crista exists, only the catenoid subsists. This finding has important consequences for further functional modeling of the role of the vestibular system in head motion detection and spatial orientation.

  17. Quantitative analogue modelling of the surface deformation associated with cone-sheet and dyke emplacement

    NASA Astrophysics Data System (ADS)

    Guldstrand, Frank; Bjugger, Fanny; Galland, Olivier; Burchardt, Steffi; Hallot, Erwan

    2014-05-01

    Inclined cone-sheets and sub-vertical dykes constitute the two principal types of magmatic sheet intrusions produced by volcanic systems. In active volcanic systems, the emplacement of sheet intrusions causes measurable surface deformation, which is analyzed through geodetic models. Geodetic model output is classically the shape of underlying intrusions causing the surface deformation, however, the results of these models are not testable as the subsurface intrusion is not accessible. Such test would only be doable with a physical system in which both (1) the surface deformation pattern and (2) the 3D shape of the underlying intrusion are known. In addition, established geodetic models only consider static magma intrusions, and do not account for emplacement and propagation processes. This would require combined good time- and space-resolution, which is not achievable with classical geodetic monitoring systems. We present a series of analogue models that may be a way of accurately linking surface deformation to the underlying intrusions and associated emplacement processes. We systematically varied depth of intrusion, the cohesive properties of the silica powder representing the country rock and the velocity of injected magma. The pressure of the intruding vegetable oil was measured through time, and the model surface topography was monitored. The low viscosity magma was simulated by molten vegetable oil, which solidified after intrusion; the solidified intrusion was then excavated and its shape was measured. By linking the development of the surface uplift in height, area, and volume with the pressure data from the onset of intrusion until the time of eruption, we identify characteristic laws of surface deformation. First results indicate that the pattern of uplift over time varies, depending on whether deformation is caused by a dyke- or a cone-sheet-shaped intrusion. The results from all experiments may enable us to distinguish the two intrusion types using

  18. Dynamic modeling of beams with non-material, deformation-dependent boundary conditions

    NASA Astrophysics Data System (ADS)

    Humer, Alexander

    2013-02-01

    In conventional problems of structural mechanics, both kinematic boundary conditions and external forces are prescribed at fixed material points that are known in advance. If, however, a structure may move relative to its supports, the position of the imposed constraint relations generally changes in the course of motion. A class of problems which inherently exhibits this particular type of non-material boundary conditions is that of axially moving continua. Despite varying in time, the positions of the supports relative to the material points of the body have usually assumed to be known a priori throughout the deformation process in previous investigations. This requirement is abandoned in the present paper, where the dynamic behavior of a structure is studied, which may move freely relative to one of its supports. As a consequence, the position of such a non-material boundary relative to the structure does not only change in time but also depends on the current state of deformation of the body. The variational formulation of the equilibrium relations of a slender beam that may undergo large deformations is presented. To this end, a theory based on Reissner's geometrically exact relations for the plane deformation of beams is adopted, in which shear deformation is neglected for the sake of brevity. Before a finite element scheme is developed, a deformation-dependent transformation of the beam's material coordinate is introduced, by which the varying positions of the constraint relations are mapped onto fixed points with respect to the new non-material coordinate. By means of this transformation, additional convective terms emerge from the virtual work of the inertia forces, whose symmetry properties turn out to be different from what has previously been presented in the literature. In order to obtain approximate solutions, a finite element discretization utilizing absolute nodal displacements as coordinates is subsequently used in characteristic numerical examples

  19. Thermo-mechanical modeling of dendrite deformation in continuous casting of steel

    NASA Astrophysics Data System (ADS)

    Domitner, J.; Drezet, J.-M.; Wu, M.; Ludwig, A.

    2012-07-01

    In the field of modern steelmaking, continuous casting has become the major manufacturing process to handle a wide range of steel grades. An important criterion characterizing the quality of semi-finished cast products is the macrosegregation forming at the centre of these products during solidification. The deformation induced interdendritic melt flow has been identified as the key mechanism for the formation of centreline segregation. Bulging of the solidified strand shell causes deformation of the solidifying dendrites at the casting's centre. Hence, a fundamental knowledge about the solid phase motion during casting processes is crucial to examine segregation phenomena in detail. To investigate dendritic deformation particularly at the strand centre, a thermo-mechanical Finite Element (FE) simulation model is built in the commercial software package ABAQUS. The complex dendritic shape is approximated with a conical model geometry. Varying this geometry allows considering the influence of different centreline solid fractions on the dendrite deformation. A sinusoidal load profile is used to describe bulging of the solid which deforms the dendrites. Based on the strain rates obtained in the FE simulations the dendrite deformation velocity perpendicular to the casting direction is calculated. The velocity presented for different conditions is used as input parameter for computational fluid dynamics (CFD) simulations to investigate macrosegregation formation inside of a continuous casting strand using the commercial software package FLUENT.

  20. Virtual Deformation Control of the X-56A Model with Simulated Fiber Optic Sensors

    NASA Technical Reports Server (NTRS)

    Suh, Peter M.; Chin, Alexander Wong

    2013-01-01

    A robust control law design methodology is presented to stabilize the X-56A model and command its wing shape. The X-56A was purposely designed to experience flutter modes in its flight envelope. The methodology introduces three phases: the controller design phase, the modal filter design phase, and the reference signal design phase. A mu-optimal controller is designed and made robust to speed and parameter variations. A conversion technique is presented for generating sensor strain modes from sensor deformation mode shapes. The sensor modes are utilized for modal filtering and simulating fiber optic sensors for feedback to the controller. To generate appropriate virtual deformation reference signals, rigid-body corrections are introduced to the deformation mode shapes. After successful completion of the phases, virtual deformation control is demonstrated. The wing is deformed and it is shown that angle-of-attack changes occur which could potentially be used to an advantage. The X-56A program must demonstrate active flutter suppression. It is shown that the virtual deformation controller can achieve active flutter suppression on the X-56A simulation model.

  1. Virtual Deformation Control of the X-56A Model with Simulated Fiber Optic Sensors

    NASA Technical Reports Server (NTRS)

    Suh, Peter M.; Chin, Alexander W.; Mavris, Dimitri N.

    2014-01-01

    A robust control law design methodology is presented to stabilize the X-56A model and command its wing shape. The X-56A was purposely designed to experience flutter modes in its flight envelope. The methodology introduces three phases: the controller design phase, the modal filter design phase, and the reference signal design phase. A mu-optimal controller is designed and made robust to speed and parameter variations. A conversion technique is presented for generating sensor strain modes from sensor deformation mode shapes. The sensor modes are utilized for modal filtering and simulating fiber optic sensors for feedback to the controller. To generate appropriate virtual deformation reference signals, rigid-body corrections are introduced to the deformation mode shapes. After successful completion of the phases, virtual deformation control is demonstrated. The wing is deformed and it is shown that angle-ofattack changes occur which could potentially be used to an advantage. The X-56A program must demonstrate active flutter suppression. It is shown that the virtual deformation controller can achieve active flutter suppression on the X-56A simulation model.

  2. Modelling multi-scale deformation of amorphous glassy polymers with experimentally motivated evolution of the microstructure

    NASA Astrophysics Data System (ADS)

    Engqvist, Jonas; Wallin, Mathias; Ristinmaa, Matti; Hall, Stephen A.; Plivelic, Tomás S.

    2016-11-01

    Novel experimental data, obtained recently using advanced multi-scale experiments, have been used to develop a micro-mechanically motivated constitutive model for amorphous glassy polymers. Taking advantage of the experiments, the model makes use of a microstructural deformation gradient to incorporate the experimentally obtained deformation of the microstructure, as well as its evolving orientation. By comparing results from the model to experimental data, it is shown that the proposed approach is able to accurately predict glassy polymer deformation over a wide range of length-scales, from the macroscopic response (mm range) down to the deformation of the microstructure (nm range). The proposed model is evaluated by comparing the numerical response to experimental results on multiple scales from an inhomogeneous cold drawing experiment of glassy polycarbonate. Besides the macroscopic force-displacement response, a qualitative comparison of the deformation field at the surface of the specimen is performed. Furthermore, the predicted evolution of the fabric orientation is compared to experimental results obtained from X-ray scattering experiments. The model shows very good agreement with the experimental data over a wide range of length scales.

  3. Static modeling for membrane deformable mirror used in high-power laser

    NASA Astrophysics Data System (ADS)

    Wu, Peng; Chen, Haiqing; Li, Jie; Yu, Hongbin

    2007-01-01

    The technology of membrane deformable mirror (DMs) that has the potential to achieve comprehensive wavefront compensation and control in high power laser has been developed rapidly in recent years. Experimental results reveal that strong nonlinearity is induced to the deformation of DMs with respect to the square of input voltage when operating voltage is more than 120V. The nonlinear response and strong coupling effect of control channel in DMs make it difficult to obtain the desired mirror surface shapes. A test bed is built up to measure the deformation of DMs driven by specified voltages. An efficient nonlinear model of deformation with respect to input voltages is presented using a back propagation neural network (BPNN). Deformation due to arbitrary actuator voltages applied to actuators to correct wavefront aberration can be calculated directly with a higher precision using the BPNN model proposed. The residual relative error of the proposed model shows the improvement of accuracy of an order about 5 as compared to that of linear model, and with no significant increase of time consumption. A preliminary open-loop control experiment of laser wavefront compensation is performed to exam the validity of applying the proposed BPNN model in laser wavefront compensation application.

  4. Newport-Inglewood-Carlsbad-Coronado Bank Fault System Nearshore Southern California: Testing models for Quaternary deformation

    NASA Astrophysics Data System (ADS)

    Bennett, J. T.; Sorlien, C. C.; Cormier, M.; Bauer, R. L.

    2011-12-01

    The San Andreas fault system is distributed across hundreds of kilometers in southern California. This transform system includes offshore faults along the shelf, slope and basin- comprising part of the Inner California Continental Borderland. Previously, offshore faults have been interpreted as being discontinuous and striking parallel to the coast between Long Beach and San Diego. Our recent work, based on several thousand kilometers of deep-penetration industry multi-channel seismic reflection data (MCS) as well as high resolution U.S. Geological Survey MCS, indicates that many of the offshore faults are more geometrically continuous than previously reported. Stratigraphic interpretations of MCS profiles included the ca. 1.8 Ma Top Lower Pico, which was correlated from wells located offshore Long Beach (Sorlien et. al. 2010). Based on this age constraint, four younger (Late) Quaternary unconformities are interpreted through the slope and basin. The right-lateral Newport-Inglewood fault continues offshore near Newport Beach. We map a single fault for 25 kilometers that continues to the southeast along the base of the slope. There, the Newport-Inglewood fault splits into the San Mateo-Carlsbad fault, which is mapped for 55 kilometers along the base of the slope to a sharp bend. This bend is the northern end of a right step-over of 10 kilometers to the Descanso fault and about 17 km to the Coronado Bank fault. We map these faults for 50 kilometers as they continue over the Mexican border. Both the San Mateo - Carlsbad with the Newport-Inglewood fault and the Coronado Bank with the Descanso fault are paired faults that form flower structures (positive and negative, respectively) in cross section. Preliminary kinematic models indicate ~1km of right-lateral slip since ~1.8 Ma at the north end of the step-over. We are modeling the slip on the southern segment to test our hypothesis for a kinematically continuous right-lateral fault system. We are correlating four

  5. Left ventricular endocardium tracking by fusion of biomechanical and deformable models.

    PubMed

    Ketout, Hussin; Gu, Jason

    2014-01-01

    This paper presents a framework for tracking left ventricular (LV) endocardium through 2D echocardiography image sequence. The framework is based on fusion of biomechanical (BM) model of the heart with the parametric deformable model. The BM model constitutive equation consists of passive and active strain energy functions. The deformations of the LV are obtained by solving the constitutive equations using ABAQUS FEM in each frame in the cardiac cycle. The strain energy functions are defined in two user subroutines for active and passive phases. Average fusion technique is used to fuse the BM and deformable model contours. Experimental results are conducted to verify the detected contours and the results are evaluated by comparing them to a created gold standard. The results and the evaluation proved that the framework has the tremendous potential to track and segment the LV through the whole cardiac cycle. PMID:24587814

  6. Left Ventricular Endocardium Tracking by Fusion of Biomechanical and Deformable Models

    PubMed Central

    Gu, Jason

    2014-01-01

    This paper presents a framework for tracking left ventricular (LV) endocardium through 2D echocardiography image sequence. The framework is based on fusion of biomechanical (BM) model of the heart with the parametric deformable model. The BM model constitutive equation consists of passive and active strain energy functions. The deformations of the LV are obtained by solving the constitutive equations using ABAQUS FEM in each frame in the cardiac cycle. The strain energy functions are defined in two user subroutines for active and passive phases. Average fusion technique is used to fuse the BM and deformable model contours. Experimental results are conducted to verify the detected contours and the results are evaluated by comparing themto a created gold standard. The results and the evaluation proved that the framework has the tremendous potential to track and segment the LV through the whole cardiac cycle. PMID:24587814

  7. Rotational Sweepback of Magnetic Field Lines in Geometrical Models of Pulsar Radio Emission

    NASA Technical Reports Server (NTRS)

    Dyks, J.; Harding, Alice K.

    2004-01-01

    We study the rotational distortions of the vacuum dipole magnetic field in the context of geometrical models of the radio emission from pulsars. We find that at low altitudes the rotation deflects the local direction of the magnetic field by at most an angle of the order of r(sup 2 sub n), where r(sub n) = r/R(sub lc), r is the radial distance and R(sub lc) is the light cylinder radius. To the lowest (i.e. second) order in r(sub n) this distortion is symmetrical with respect to the plane containing the dipole axis and the rotation axis ((Omega, mu) plane). The lowest order distortion which is asymmetrical with respect to the (Omega, mu) plane is third order in r(sub n). These results confirm the common assumption that the rotational sweepback has negligible effect on the position angle (PA) curve. We show, however, that the influence of the sweep back on the outer boundary of the open field line region (open volume) is a much larger effect, of the order of r(sup 1/2 sub n). The open volume is shifted backwards with respect to the rotation direction by an angle delta(sub o nu) approx. 0.2 sin alpha r(sup 1/2 sub n) where alpha is the dipole inclination with respect to the rotation axis. The associated phase shift of the pulse profile Delta phi(sub o nu) approx. 0.2 r(sup 1/2 sub n) can easily exceed the shift due to combined effects of aberration and propagation time delays (approx. 2r(sub n)). This strongly affects the misalignment of the center of the PA curve and the center of the pulse profile, thereby modifying the delay radius relation. Contrary to intuition, the effect of sweepback dominates over other effects when emission occurs at low altitudes. For r(sub n) < or approx. 3 x 10(exp -3) the shift becomes negative, i.e. the center of the position angle curve precedes the profile center. With the sweepback effect included, the modified delay-radius relation predicts larger emission radii and is in much better agreement with the other methods of determining r

  8. Wall stress and deformation analysis in a numerical model of pulse wave propagation.

    PubMed

    He, Fan; Hua, Lu; Gao, Lijian

    2015-01-01

    To simulate pulse wave propagation, we set up a wave propagation model using blood-wall interaction in previous work. In this paper, our purpose is to investigate wall stress and deformation of the wave propagation model. The finite element method is employed for solving the governing equations of blood and wall. Our results suggest that there are two peaks in the circumferential stress and strain distributions of the normal model. The stress and strain values change with the varieties of different factors, such as wall thickness and vessel diameter. The results indicate that different parameters of fluid and tube wall have remarked impact on wall stress and deformation. PMID:26406044

  9. A theoretical model to predict tensile deformation behavior of balloon catheter.

    PubMed

    Todo, Mitsugu; Yoshiya, Keiji; Matsumoto, Takuya

    2016-09-01

    In this technical note, a simple theoretical model was proposed to express the tensile deformation and fracture of balloon catheter tested by the ISO standard using piece-wise linear force-displacement relations. The model was then validated by comparing with the tensile force-displacement behaviors of two types of typical balloon catheters clinically used worldwide. It was shown that the proposed model can effectively be used to express the tensile deformation behavior and easily be handled by physicians who are not familiar with mechanics of materials. PMID:27214691

  10. Wall stress and deformation analysis in a numerical model of pulse wave propagation.

    PubMed

    He, Fan; Hua, Lu; Gao, Lijian

    2015-01-01

    To simulate pulse wave propagation, we set up a wave propagation model using blood-wall interaction in previous work. In this paper, our purpose is to investigate wall stress and deformation of the wave propagation model. The finite element method is employed for solving the governing equations of blood and wall. Our results suggest that there are two peaks in the circumferential stress and strain distributions of the normal model. The stress and strain values change with the varieties of different factors, such as wall thickness and vessel diameter. The results indicate that different parameters of fluid and tube wall have remarked impact on wall stress and deformation.

  11. Flagellar arrest behavior predicted by the Geometric Clutch model is confirmed experimentally by micromanipulation experiments on reactivated bull sperm.

    PubMed

    Holcomb-Wygle, D L; Schmitz, K A; Lindemann, C B

    1999-11-01

    The central tenet of the Geometric Clutch hypothesis of flagellar beating is that the internal force transverse to the outer doublets (t-force) mediates the initiation and termination of episodes of dynein engagement. Therefore, if the development of an adequate t-force is prevented, then the dynein-switching necessary to complete a cycle of beating should fail. The dominant component of the t-force is the product of the longitudinal force on each outer doublet multiplied by the local curvature of the flagellum. In the present study, two separate strategies, blocking and clipping, were employed to limit the development of the t-force in Triton X-100 extracted bull sperm models. The blocking strategy used a bent glass microprobe to restrict the flagellum during a beat, preventing the development of curvature in the basal portion of the flagellum. The clipping strategy was designed to shorten the flagellum by clipping off distal segments of the flagellum with a glass microprobe. This limits the number of dyneins that can contribute to bending and consequently reduces the longitudinal force on the doublets. The blocking and clipping strategies both produced an arrest of the beat cycle consistent with predictions based on the Geometric Clutch hypothesis. Direct comparison of experimentally produced arrest behavior to the behavior of the Geometric Clutch computer model of a bull sperm yielded similar arrest patterns. The computer model duplicated the observed behavior using reasonable values for dynein force and flagellar stiffness. The experimental data derived from both blocking and clipping experiments are fully compatible with the Geometric Clutch hypothesis. PMID:10542366

  12. Memory effects in schematic models of glasses subjected to oscillatory deformation.

    PubMed

    Fiocco, Davide; Foffi, Giuseppe; Sastry, Srikanth

    2015-05-20

    We consider two schematic models of glasses subjected to oscillatory shear deformation, motivated by the observations, in computer simulations of a model glass, of a nonequilibrium transition from a localized to a diffusive regime as the shear amplitude is increased, and of persistent memory effects in the localized regime. The first of these schematic models is the NK model, a spin model with disordered multi-spin interactions previously studied as a model for sheared amorphous solids. The second model, a transition matrix model, is an abstract formulation of the manner in which occupancy of local energy minima evolves under oscillatory deformation cycles. In both of these models, we find a behavior similar to that of an atomic model glass studied earlier. We discuss possible further extensions of the approaches outlined.

  13. Memory effects in schematic models of glasses subjected to oscillatory deformation

    NASA Astrophysics Data System (ADS)

    Fiocco, Davide; Foffi, Giuseppe; Sastry, Srikanth

    2015-05-01

    We consider two schematic models of glasses subjected to oscillatory shear deformation, motivated by the observations, in computer simulations of a model glass, of a nonequilibrium transition from a localized to a diffusive regime as the shear amplitude is increased, and of persistent memory effects in the localized regime. The first of these schematic models is the NK model, a spin model with disordered multi-spin interactions previously studied as a model for sheared amorphous solids. The second model, a transition matrix model, is an abstract formulation of the manner in which occupancy of local energy minima evolves under oscillatory deformation cycles. In both of these models, we find a behavior similar to that of an atomic model glass studied earlier. We discuss possible further extensions of the approaches outlined.

  14. A detailed study on the use of polynomial functions for modeling geometric distortion in magnetic resonance imaging.

    PubMed

    Wang, Deming; Yang, Zhengyi

    2008-03-01

    The use of polynomial functions for modeling geometric distortion in magnetic resonance imaging (MRI) that arises from scanner's hardware imperfection is studied in detail. In this work, the geometric distortion data from four representative MRI systems were used. Modeling of these data using polynomial functions of the fourth, fifth, sixth, and seventh orders was carried out. In order to investigate how this modeling performed for different size and shape of the volume of interest, the modeling was carried out for three different volumes of interest (VOI): a cube, a cylinder, and a sphere. The modeling's goodness was assessed using both the maximum and mean absolute errors. The modeling results showed that (i) for the cube VOI there appears to be an optimal polynomial function that gives the least modeling errors and the sixth order polynomial was found to be the optimal polynomial function for the size of the cubic VOI considered in the present work; (ii) for the cylinder VOI, all four polynomials performed approximately equally well but a trend of a slight decrease in the mean absolute error with the increasing order of the polynomial was noted; and (iii) for the sphere VOI, the maximum absolute error showed some variations with the order of the polynomial, with the fourth order polynomial producing the smallest maximum absolute errors. It is further noted that extrapolation could lead to very large errors so any extrapolation needs to be avoided. A detailed analysis on the modeling errors is presented.

  15. Texture development during progressive deformation of hematite aggregates: Constraints from VPSC models and naturally deformed iron oxides from Minas Gerais, Brazil

    NASA Astrophysics Data System (ADS)

    Ferreira, Filippe; Lagoeiro, Leonardo; Morales, Luiz F. G.; Oliveira, Claudinei G. de; Barbosa, Paola; Ávila, Carlos; Cavalcante, Geane C. G.

    2016-09-01

    We show that naturally-deformed hematite from the Quadrilátero Ferrífero Province, Minas Gerais, Brazil, develops CPOs by dislocation creep, strongly influenced by basal plane parallel glide, even when this is not the favored slip system. Characterization of microstructure and texture, particularly intragranular misorientations, of naturally deformed hematite aggregates by EBSD allowed us to determine the importance of different slip systems, and confirm dislocation creep as the dominant deformation mechanism. Viscoplastic self-consistent (VPSC) models were constructed to constrain the slip systems required to operate for the observed CPO to develop, and its rheological implications. Changes in the CRSS ratio of hematite prism and basal slip systems and deformation regime lead to the development of distinct patterns of hematite crystallographic orientations. The basal slip-dominated simple shear model is the only one that can develop quasi-single-crystal CPO of the kind observed in highly deformed rocks from Quadrilátero Ferrífero. Comparison between naturally deformed hematite aggregates and VPSC models shows that CPO development of hematite is strongly influenced by a highly viscoplastic anisotropy through dislocation creep on hematite basal plane. Nonetheless, our results demonstrate that even the unfavorable slip systems should be regarded when the bulk rheology of mineral aggregates is evaluated.

  16. Marginal deformations of WZNW and coset models from O( d, d) transformations

    NASA Astrophysics Data System (ADS)

    Hassan, S. F.; Sen, Ashoke

    1993-09-01

    We show that the O(2, 2) transformation of the SU(2) WZNW model gives rise to marginal deformation of this model by the operator ∫ d2zJ(z) overlineJ( overlinez) where J, overlineJareU(1) currents in the Cartan subalgebra. Generalization of this result to other WZNW theories is discussed. We also consider the O(3, 3) transformation of the product of an SU(2) WZNW model and a gauged SU(2) WZNW model. The three-parameter set of models obtained after the transformation is shown to be the result of first deforming the product of two SU(2) WZNW theories by marginal operators of the form Σ i,j = 12 C ijJ ioverlineJj, and then gauging an appropriate U(1) subgroup of the theory. Our analysis leads to a general conjecture that O( d, d) transformations of any WZNW model correspond to marginal deformation of the WZNW theory by an appropriate combination of left and right moving currents belonging to the Cartan subalgebra; and O( d, d) transformations of a gauged WZNW model can be identified to the gauged version of such marginally deformed WZNW models.

  17. Genus one correction to Seiberg-Witten prepotential from β-deformed matrix model

    NASA Astrophysics Data System (ADS)

    Baek, Jong-Hyun

    2013-04-01

    We study β-deformed matrix models with Penner type potentials, which correspond to {N}=2 SU(2) supersymmetric gauge theories with N F = 2 , 3, and 4 flavors. We compute explicitly the genus one corrections to the free energy of the matrix model and show that they match the corresponding results obtained from the Nekrasov partition function.

  18. Videogrammetric Model Deformation Measurement Software Package: Reference Manual for MDef.exe

    NASA Technical Reports Server (NTRS)

    Cate, Kenneth H.

    2001-01-01

    The program MDef.exe was created to take images in wind tunnels of models under test, identify targets, compute the targets centroids, compute the target's real-world X-Y-Z coordinates and the model's deformation (vertical displacement and wing twist).

  19. Aeroelastic Deformation Measurements of Flap, Gap, and Overhang on a Semispan Model

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Liu, Tianshu; Garg, Sanjay; Ghee, Terence A.; Taylor, Nigel J.

    2000-01-01

    Single-camera, single-view videogrammetry has been used to determine static aeroelastic deformation of a slotted flap configuration on a semispan model at the National Transonic Facility (NTF). Deformation was determined by comparing wind-off to wind-on spatial data from targets placed on the main element, shroud, and flap of the model. Digitized video images from a camera were recorded and processed to automatically determine target image plane locations that were then corrected for sensor, lens, and frame grabber spatial errors. The videogrammetric technique has been established at NASA facilities as the technique of choice when high-volume static aeroelastic data with minimum impact on data taking is required. The primary measurement at the NTF with this technique in the past has been the measurement of static aeroelastic wing twist on full span models. The first results using the videogrammetric technique for the measurement of component deformation during semispan testing at the NTF are presented.

  20. A model of grain refinement and strengthening of Al alloys due to cold severe plastic deformation

    NASA Astrophysics Data System (ADS)

    Qiao, Xiao Guang; Gao, Nong; Starink, Marco J.

    2012-02-01

    This paper presents a model which quantitatively predicts grain refinement and strength/hardness of Al alloys after very high levels of cold deformation through processes including cold rolling, equal channel angular pressing (ECAP), multiple forging (MF), accumulative roll bonding (ARB) and embossing. The model deals with materials in which plastic deformation is exclusively due to dislocation movement within grains, which is in good approximation the case for many metallic alloys at low temperature, for instance aluminium alloys. In the early stages of deformation, the generated dislocations are stored in grains and contribute to overall strength. With increase in strain, excess dislocations form and/or move to new cell walls/grain boundaries and grains are refined. We examine this model using both our own data as well as the data in the literature. It is shown that grain size and strength/hardness are predicted to a good accuracy.

  1. Geometric Mechanics

    NASA Astrophysics Data System (ADS)

    Talman, Richard

    1999-10-01

    Mechanics for the nonmathematician-a modern approach For physicists, mechanics is quite obviously geometric, yet the classical approach typically emphasizes abstract, mathematical formalism. Setting out to make mechanics both accessible and interesting for nonmathematicians, Richard Talman uses geometric methods to reveal qualitative aspects of the theory. He introduces concepts from differential geometry, differential forms, and tensor analysis, then applies them to areas of classical mechanics as well as other areas of physics, including optics, crystal diffraction, electromagnetism, relativity, and quantum mechanics. For easy reference, Dr. Talman treats separately Lagrangian, Hamiltonian, and Newtonian mechanics-exploring their geometric structure through vector fields, symplectic geometry, and gauge invariance respectively. Practical perturbative methods of approximation are also developed. Geometric Mechanics features illustrative examples and assumes only basic knowledge of Lagrangian mechanics. Of related interest . . . APPLIED DYNAMICS With Applications to Multibody and Mechatronic Systems Francis C. Moon A contemporary look at dynamics at an intermediate level, including nonlinear and chaotic dynamics. 1998 (0-471-13828-2) 504 pp. MATHEMATICAL PHYSICS Applied Mathematics for Scientists and Engineers Bruce Kusse and Erik Westwig A comprehensive treatment of the mathematical methods used to solve practical problems in physics and engineering. 1998 (0-471-15431-8) 680 pp.

  2. Meshless deformable models for 3D cardiac motion and strain analysis from tagged MRI.

    PubMed

    Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Schaerer, Joël; Qian, Zhen; Huh, Suejung; Metaxas, Dimitris; Axel, Leon

    2015-01-01

    Tagged magnetic resonance imaging (TMRI) provides a direct and noninvasive way to visualize the in-wall deformation of the myocardium. Due to the through-plane motion, the tracking of 3D trajectories of the material points and the computation of 3D strain field call for the necessity of building 3D cardiac deformable models. The intersections of three stacks of orthogonal tagging planes are material points in the myocardium. With these intersections as control points, 3D motion can be reconstructed with a novel meshless deformable model (MDM). Volumetric MDMs describe an object as point cloud inside the object boundary and the coordinate of each point can be written in parametric functions. A generic heart mesh is registered on the TMRI with polar decomposition. A 3D MDM is generated and deformed with MR image tagging lines. Volumetric MDMs are deformed by calculating the dynamics function and minimizing the local Laplacian coordinates. The similarity transformation of each point is computed by assuming its neighboring points are making the same transformation. The deformation is computed iteratively until the control points match the target positions in the consecutive image frame. The 3D strain field is computed from the 3D displacement field with moving least squares. We demonstrate that MDMs outperformed the finite element method and the spline method with a numerical phantom. Meshless deformable models can track the trajectory of any material point in the myocardium and compute the 3D strain field of any particular area. The experimental results on in vivo healthy and patient heart MRI show that the MDM can fully recover the myocardium motion in three dimensions.

  3. Meshless deformable models for 3D cardiac motion and strain analysis from tagged MRI.

    PubMed

    Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Schaerer, Joël; Qian, Zhen; Huh, Suejung; Metaxas, Dimitris; Axel, Leon

    2015-01-01

    Tagged magnetic resonance imaging (TMRI) provides a direct and noninvasive way to visualize the in-wall deformation of the myocardium. Due to the through-plane motion, the tracking of 3D trajectories of the material points and the computation of 3D strain field call for the necessity of building 3D cardiac deformable models. The intersections of three stacks of orthogonal tagging planes are material points in the myocardium. With these intersections as control points, 3D motion can be reconstructed with a novel meshless deformable model (MDM). Volumetric MDMs describe an object as point cloud inside the object boundary and the coordinate of each point can be written in parametric functions. A generic heart mesh is registered on the TMRI with polar decomposition. A 3D MDM is generated and deformed with MR image tagging lines. Volumetric MDMs are deformed by calculating the dynamics function and minimizing the local Laplacian coordinates. The similarity transformation of each point is computed by assuming its neighboring points are making the same transformation. The deformation is computed iteratively until the control points match the target positions in the consecutive image frame. The 3D strain field is computed from the 3D displacement field with moving least squares. We demonstrate that MDMs outperformed the finite element method and the spline method with a numerical phantom. Meshless deformable models can track the trajectory of any material point in the myocardium and compute the 3D strain field of any particular area. The experimental results on in vivo healthy and patient heart MRI show that the MDM can fully recover the myocardium motion in three dimensions. PMID:25157446

  4. Meshless deformable models for 3D cardiac motion and strain analysis from tagged MRI

    PubMed Central

    Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Schaerer, Joël; Qian, Zhen; Huh, Suejung; Metaxas, Dimitris; Axel, Leon

    2016-01-01

    Tagged magnetic resonance imaging (TMRI) provides a direct and noninvasive way to visualize the in-wall deformation of the myocardium. Due to the through-plane motion, the tracking of 3D trajectories of the material points and the computation of 3D strain field call for the necessity of building 3D cardiac deformable models. The intersections of three stacks of orthogonal tagging planes are material points in the myocardium. With these intersections as control points, 3D motion can be reconstructed with a novel meshless deformable model (MDM). Volumetric MDMs describe an object as point cloud inside the object boundary and the coordinate of each point can be written in parametric functions. A generic heart mesh is registered on the TMRI with polar decomposition. A 3D MDM is generated and deformed with MR image tagging lines. Volumetric MDMs are deformed by calculating the dynamics function and minimizing the local Laplacian coordinates. The similarity transformation of each point is computed by assuming its neighboring points are making the same transformation. The deformation is computed iteratively until the control points match the target positions in the consecutive image frame. The 3D strain field is computed from the 3D displacement field with moving least squares. We demonstrate that MDMs outperformed the finite element method and the spline method with a numerical phantom. Meshless deformable models can track the trajectory of any material point in the myocardium and compute the 3D strain field of any particular area. The experimental results on in vivo healthy and patient heart MRI show that the MDM can fully recover the myocardium motion in three dimensions. PMID:25157446

  5. Projection space image reconstruction using strip functions to calculate pixels more "natural" for modeling the geometric response of the SPECT collimator.

    PubMed

    Hsieh, Y L; Zeng, G L; Gullberg, G T

    1998-02-01

    The spatially varying geometric response of the collimator-detector system in single photon emission computed tomography (SPECT) causes loss in resolution, shape distortions, reconstructed density nonuniformity, and quantitative inaccuracies. A projection space image reconstruction algorithm is used to correct these reconstruction artifacts. The projectors F use strip functions to calculate pixels more "natural" for modeling the two-dimensional (2-D) geometric response of the SPECT collimator transaxially to the axis of rotation. These projectors are defined by summing the intersection of an array of multiple strips rotated at equal angles to approximate the ideal system geometric response of the collimator. Two projection models were evaluated for modeling the system geometric response function. For one projector each strip is of equal weight, for the other projector a Gaussian weighting is used. Parallel beam and fan beam projections of a physical three-dimensional (3-D) Hoffman brain phantom and a Jaszczak cold rod phantom were used to evaluate the geometric response correction. Reconstructions were obtained by using the singular value decomposition (SVD) method and the iterative conjugate gradient algorithm to solve for q in the imaging equation FGq = p, where p is the projection measurement. The projector F included the new models for the geometric response, whereas, the backprojector G did not always model the geometric response in order to increase the computational speed. The final reconstruction was obtained by sampling the backprojection Gq at a discrete array of points. Reconstructions produced by the two proposed projectors showed improved resolution when compared against a unit-strip "natural" pixel model, the conventional image pixelized model with ray tracing to calculate the geometric response, and the filtered backprojection algorithm. When the reconstruction is displayed on fine grid points, the continuity and resolution of the image is preserved

  6. In Situ Sensing Guided Geotechnical Modelling of Subglacial Deformation

    NASA Astrophysics Data System (ADS)

    Clayton, A.; Brain, M.; Hart, J. K.; Roberts, D.; Martinez, K.; Rosser, N. J.

    2014-12-01

    Data collected by in situ subglacial probes has been used to guide a series of geotechnical tests on till. The testing provides an opportunity to develop a process-based understanding of movement patterns observed in the subglacial environment. The probes were deployed by the Glacsweb project at Skalafellsjökull, Iceland, in 2008 and 2012. They were emplaced in till below 80 m of ice and recorded a number of variables including pore pressure, case stress, movement and conductivity. During the winter of 2008-2009 cyclic pressure changes were recorded in the till. Repeated pore pressure increases of up to 20% occurred over a variable period of one to eight weeks. Each rise was followed by a sharp drop in pore pressure lasting up to a few days. A back pressure shear box was used to replicate the pore pressure changes whilst maintaining a constant horizontal shear stress and normal total stress to examine effects on deformation and strain rate. Till was collected for testing from the ice margin close to the probes in 2012 and remoulded for use in the back pressure shear box. General characterisation of the till was performed to benchmark it against previous work and then a series of pore pressure re-inflation tests were undertaken. These approximated the pore pressure variations observed in the field by linearly increasing pore pressure and so decreasing normal effective stress. The till displayed dilatancy-induced episodic increases in strain rate. These were regulated by consolidation that increased shear strength and so reduced strain rate. Strain rate variations were similar to ice velocity variations recorded by differential GPS deployed on the ice surface above the probes.

  7. On the choice of boundary conditions in continuum models of continental deformation

    NASA Technical Reports Server (NTRS)

    Wdowinski, Shimon; O'Connell, Richard J.

    1990-01-01

    Recent studies of continental deformation have treated the lithosphere as a viscous medium and investigated the time evolution of the deformation caused by tectonic and buoyancy forces. This paper examines the differences between (1) continuum models that keep velocity boundary conditions constant with time and (2) models that keep stress boundary conditions constant with time. These differences are demonstrated by using a simple example of a continental lithosphere that is subjected to horizontal compression. The results show that in (2) the indentation velocity decreases with time, while in (1) the indentation velocity remains constant with time.

  8. [The model of geometrical human body phantom for calculating tissue doses in the service module of the International Space Station].

    PubMed

    Bondarenko, V A; Mitrikas, V G

    2007-01-01

    The model of a geometrical human body phantom developed for calculating the shielding functions of representative points of the body organs and systems is similar to the anthropomorphic phantom. This form of phantom can be integrated with the shielding model of the ISS Russian orbital segment to make analysis of radiation loading of crewmembers in different compartments of the vehicle. Calculation of doses absorbed by the body systems in terms of the representative points makes it clear that doses essentially depend on the phantom spatial orientation (eye direction). It also enables the absorbed dose evaluation from the shielding functions as the mean of the representative points and phantom orientation.

  9. Building a Framework Earthquake Cycle Deformational Model for Subduction Megathrust Zones: Integrating Observations with Numerical Models

    NASA Astrophysics Data System (ADS)

    Furlong, Kevin P.; Govers, Rob; Herman, Matthew

    2016-04-01

    Subduction zone megathrusts host the largest and deadliest earthquakes on the planet. Over the past decades (primarily since the 2004 Sumatra event) our abilities to observe the build-up in slip deficit along these plate boundary zones has improved substantially with the development of relatively dense observing systems along major subduction zones. One, perhaps unexpected, result from these observations is a range of present-day behavior along the boundaries. Some regions show displacements (almost always observed on the upper plate along the boundary) that are consistent with elastic deformation driven by a fully locked plate interface, while other plate boundary segments (oftentimes along the same plate boundary system) show little or no plate motion directed displacements. This latter case is often interpreted as reflecting little to no coupling along the plate boundary interface. What is unclear is whether this spatial variation in apparent plate boundary interface behavior reflects true spatial differences in plate interface properties and mechanics, or may rather reflect temporal behavior of the plate boundary during the earthquake cycle. In our integrated observational and modeling analyses, we have come to the conclusion that much of what is seen as diverse behavior along subduction margins represents different time in the earthquake cycle (relative to recurrence rate and material properties) rather than fundamental differences between subduction zone mechanics. Our model-constrained conceptual model accounts for the following generalized observations: 1. Coseismic displacements are enhanced in "near-trench" region 2. Post-seismic relaxation varies with time and position landward - i.e. there is a propagation of the transition point from "post" (i.e. trenchward) to "inter" (i.e. landward) seismic displacement behavior. 3. Displacements immediately post-EQ (interpreted to be associated with "after slip" on megathrust?). 4. The post-EQ transient response can

  10. Automatic measurement of vertebral body deformations in CT images based on a 3D parametric model

    NASA Astrophysics Data System (ADS)

    Štern, Darko; Bürmen, Miran; Njagulj, Vesna; Likar, Boštjan; Pernuš, Franjo; Vrtovec, Tomaž

    2012-03-01

    Accurate and objective evaluation of vertebral body deformations represents an important part of the clinical diagnostics and therapy of pathological conditions affecting the spine. Although modern clinical practice is oriented towards threedimensional (3D) imaging techniques, the established methods for the evaluation of vertebral body deformations are based on measurements in two-dimensional (2D) X-ray images. In this paper, we propose a method for automatic measurement of vertebral body deformations in computed tomography (CT) images that is based on efficient modeling of the vertebral body shape with a 3D parametric model. By fitting the 3D model to the vertebral body in the image, quantitative description of normal and pathological vertebral bodies is obtained from the value of 25 parameters of the model. The evaluation of vertebral body deformations is based on the distance of the observed vertebral body from the distribution of the parameter values of normal vertebral bodies in the parametric space. The distribution is obtained from 80 normal vertebral bodies in the training data set and verified with eight normal vertebral bodies in the control data set. The statistically meaningful distance of eight pathological vertebral bodies in the study data set from the distribution of normal vertebral bodies in the parametric space shows that the parameters can be used to successfully model vertebral body deformations in 3D. The proposed method may therefore be used to assess vertebral body deformations in 3D or provide clinically meaningful observations that are not available when using 2D methods that are established in clinical practice.

  11. Viscoelastic-cycle model of interseismic deformation in the northwestern United States

    USGS Publications Warehouse