A geometric deformable model for echocardiographic image segmentation
NASA Technical Reports Server (NTRS)
Hang, X.; Greenberg, N. L.; Thomas, J. D.
2002-01-01
Gradient vector flow (GVF), an elegant external force for parametric deformable models, can capture object boundaries from both sides. A new geometric deformable model is proposed that combines GVF and the geodesic active contour model. The level set method is used as the numerical method of this model. The model is applied for echocardiographic image segmentation.
A geometric deformable model for echocardiographic image segmentation
NASA Technical Reports Server (NTRS)
Hang, X.; Greenberg, N. L.; Thomas, J. D.
2002-01-01
Gradient vector flow (GVF), an elegant external force for parametric deformable models, can capture object boundaries from both sides. A new geometric deformable model is proposed that combines GVF and the geodesic active contour model. The level set method is used as the numerical method of this model. The model is applied for echocardiographic image segmentation.
Biomedical image segmentation using geometric deformable models and metaheuristics.
Mesejo, Pablo; Valsecchi, Andrea; Marrakchi-Kacem, Linda; Cagnoni, Stefano; Damas, Sergio
2015-07-01
This paper describes a hybrid level set approach for medical image segmentation. This new geometric deformable model combines region- and edge-based information with the prior shape knowledge introduced using deformable registration. Our proposal consists of two phases: training and test. The former implies the learning of the level set parameters by means of a Genetic Algorithm, while the latter is the proper segmentation, where another metaheuristic, in this case Scatter Search, derives the shape prior. In an experimental comparison, this approach has shown a better performance than a number of state-of-the-art methods when segmenting anatomical structures from different biomedical image modalities.
Brst-Invariant Deformations of Geometric Structures in Sigma Models
NASA Astrophysics Data System (ADS)
Bytsenko, A. A.
The closed string correlators can be constructed from the open ones using topological string theories as a model. The space of physical closed string states is isomorphic to the Hochschild cohomology of (A,Q) (operator Q of ghost number one), - this statement has been verified by means of computation of the Hochschild cohomology of the category of D-branes. We study a Lie algebra of formal vector fields Wn with its application to the perturbative deformed holomorphic symplectic structure in the A-model, and a Calabi-Yau manifold with boundaries in the B-model. We show that equivalent classes of deformations are describing by a Hochschild cohomology theory of the DG-algebra, {A} = (A, Q), Q = bar ∂ + {∂ {deform}}, which is defined to be the cohomology of (-1)nQ+dHoch. Here bar ∂ is the initial non-deformed BRST operator while ∂deform is the deformed part whose algebra is a Lie algebra of linear vector fields gln. We assume that if in the theory exists a single D-brane then all the information associated with deformations is encoded in an associative algebra A equipped with a differential Q = bar ∂ + {∂ {deform}}. In addition equivalence classes of deformations of these data are described by a Hochschild cohomology of (A,Q), an important geometric invariant of the (anti)holomorphic structure on X. We also discuss the identification of the harmonic structure (HT•(X) HΩ•(X)) of affine space X and the group {Ext}Xn ({ {O}_Δ }, { {O}Δ }) (the HKR isomorphism), and bulk-boundary deformation pairing.
Brst-Invariant Deformations of Geometric Structures in Sigma Models
NASA Astrophysics Data System (ADS)
Bytsenko, A. A.
2011-06-01
The closed string correlators can be constructed from the open ones using topological string theories as a model. The space of physical closed string states is isomorphic to the Hochschild cohomology of (A, Q) (operator Q of ghost number one), - this statement has been verified by means of computation of the Hochschild cohomology of the category of D-branes. We study a Lie algebra of formal vector fields Wn with its application to the perturbative deformed holomorphic symplectic structure in the A-model, and a Calabi-Yau manifold with boundaries in the B-model. We show that equivalent classes of deformations are describing by a Hochschild cohomology theory of the DG-algebra {A} = (A, Q), Q = /line{\\part} + \\part { deform}, which is defined to be the cohomology of (-1)n Q + dHoch. Here /line{\\part} is the initial non-deformed BRST operator while \\partdeform is the deformed part whose algebra is a Lie algebra of linear vector fields gln. We assume that if in the theory exists a single D-brane then all the information associated with deformations is encoded in an associative algebra A equipped with a differential Q = /line{\\part}+\\part { deform}. In addition equivalence classes of deformations of these data are described by a Hochschild cohomology of (A, Q), an important geometric invariant of the (anti)holomorphic structure on X. We also discuss the identification of the harmonic structure (HT•(X); HΩ•(X)) of affine space X and the group ExtXn({O}\\triangle , {O}\\triangle ) (the HKR isomorphism), and bulk-boundary deformation pairing.
Deformations of Geometric Structures in Topological Sigma Models
NASA Astrophysics Data System (ADS)
Bytsenko, A. A.
2010-11-01
We study a Lie algebra of formal vector fields Wn with it application to the perturbative deformed holomorphic symplectic structure in the A-model, and a Calabi-Yau manifold with boundaries in the B-model. We show that equivalent classes of deformations are described by a Hochschild cohomology of the DG-algebra A = (A,Q), Q = ∂¯+∂deform, which is defined to be the cohomology of (-1)nQ+dHoch. Here ∂¯ is the initial non-deformed BRST operator while ∂deform is the deformed part whose algebra is a Lie algebra of linear vector fields gln.
Water flow based geometric active deformable model for road network
NASA Astrophysics Data System (ADS)
Leninisha, Shanmugam; Vani, Kaliaperumal
2015-04-01
A width and color based geometric active deformable model is proposed for road network extraction from remote sensing images with minimal human interception. Orientation and width of road are computed from a single manual seed point, from which the propagation starts both right and left hand directions of the starting point, which extracts the interconnected road network from the aerial or high spatial resolution satellite image automatically. Here the propagation (like water flow in canal with defined boundary) is restricted with color and width of the road. Road extraction is done for linear, curvilinear (U shape and S shape) roads first, irrespective of width and color. Then, this algorithm is improved to extract road with junctions in a shape of L, T and X along with center line. Roads with small break or disconnected roads are also extracts by a modified version of this same algorithm. This methodology is tested and evaluated with various remote sensing images. The experimental results show that the proposed method is efficient and extracting roads accurately with less computation time. However, in complex urban areas, the identification accuracy declines due to the various sizes of obstacles, over bridges, multilane etc.
A Multiple Object Geometric Deformable Model for Image Segmentation
Bogovic, John A.; Prince, Jerry L.; Bazin, Pierre-Louis
2012-01-01
Deformable models are widely used for image segmentation, most commonly to find single objects within an image. Although several methods have been proposed to segment multiple objects using deformable models, substantial limitations in their utility remain. This paper presents a multiple object segmentation method using a novel and efficient object representation for both two and three dimensions. The new framework guarantees object relationships and topology, prevents overlaps and gaps, enables boundary-specific speeds, and has a computationally efficient evolution scheme that is largely independent of the number of objects. Maintaining object relationships and straightforward use of object-specific and boundary-specific smoothing and advection forces enables the segmentation of objects with multiple compartments, a critical capability in the parcellation of organs in medical imaging. Comparing the new framework with previous approaches shows its superior performance and scalability. PMID:23316110
NASA Astrophysics Data System (ADS)
Söhn, M.; Birkner, M.; Yan, D.; Alber, M.
2005-12-01
We present a method of modelling inter-fractional organ deformation and correlated motion of adjacent organ structures in terms of so-called eigenmodes. The method is based on a principal component analysis (PCA) of organ shapes and allows for reducing the large dimensionality of geometry information from multiple CT studies to a few-parametric statistical model of organ motion and deformation. Eigenmodes are 3D vectorfields of correlated displacements of the organ surface points and can be seen as fundamental 'modes' of the patient's geometric variability. The amount of variability represented by the eigenmodes is quantified in terms of corresponding eigenvalues. Weighted sums of eigenmodes describe organ displacements/deformations and can be used to generate new organ geometries. We applied the method to four patient datasets of prostate/rectum/bladder with N = 15-18 CTs to assess interfractional geometric variation. The spectrum of eigenvalues was found to be dominated by only few values, indicating that the geometric variability of prostate/bladder/rectum is governed by only few patient specific eigenmodes. We evaluated the capability of this approach to represent the measured organ samples by calculating the residual errors for the organ surface points, using a varying number of eigenmodes. The distribution of residual errors shows fast convergence with the number of eigenmodes. Using 4 dominating modes, the range of residual errors for the four patients was 1.3-2.0 mm (prostate), 1.4-1.9 mm (rectum) and 1.5-1.9 mm (bladder). Thus, individual geometric variation taken from multiple imaging data can be described accurately by few dominating eigenmodes, thereby providing the most important factors to characterize deformable organ motion, which can assist adaptive radiotherapy planning.
NASA Astrophysics Data System (ADS)
Philippon, Mélody; Le Carlier de Veslud, Christian; Gueydan, Frédéric; Brun, Jean-Pierre; Caumon, Guillaume
2015-09-01
Superposed to ductile syn-metamorphic deformations, post-foliation deformations affect metamorphic units during their exhumation. Understanding the role of such deformations in the structuration of metamorphic units is key for understanding the tectonic evolution of convergence zones. We characterize post-foliations deformations using 3D modelling which is a first-order tool to describe complex geological structures, but a challenging task where based only on surface data. We propose a modelling procedure that combines fast draft models (interpolation of orientation data), with more complex ones where the structural context is better understood (implicit modelling), allowing us to build a 3D geometrical model of Syros Island blueschists (Cyclades), based on field data. With our approach, the 3D model is able to capture the complex present-day geometry of the island, mainly controlled by the superposition of three types of post-metamorphic deformations affecting the original metamorphic pile: i) a top-to-South ramp-flat extensional system that dominates the overall island structure, ii) large-scale folding of the metamorphic units associated with ramp-flat extensional system, and iii) steeply-dipping normal faults trending dominantly NNW-SSE and EW. The 3D surfaces produced by this method match outcrop data, are geologically consistent, and provide reasonable estimates of geological structures in poorly constrained areas.
Geometric deformable model driven by CoCRFs: application to optical coherence tomography.
Tsechpenakis, Gabriel; Lujan, Brandon; Martinez, Oscar; Gregori, Giovanni; Rosenfeld, Philip J
2008-01-01
We present a geometric deformable model driven by dynamically updated probability fields. The shape is defined with the signed distance function, and the internal (smoothness) energy consists of a C1 continuity constraint, a shape prior, and a term that forces the zero-level of the shape distance function towards a connected form. The image probability fields are estimated by our collaborative Conditional Random Field (CoCRF), which is updated during the evolution in an active learning manner: it infers class posteriors in pixels or regions with feature ambiguities by assessing the joint appearance of neighboring sites and using the classification confidence. We apply our method to Optical Coherence Tomography fundus images for the segmentation of geographic atrophies in dry age-related macular degeneration of the human eye.
NASA Astrophysics Data System (ADS)
Azimi, Maryam
Radiation therapy has been used in the treatment of cancer tumors for several years and many cancer patients receive radiotherapy. It may be used as primary therapy or with a combination of surgery or other kinds of therapy such as chemotherapy, hormone therapy or some mixture of the three. The treatment objective is to destroy cancer cells or shrink the tumor by planning an adequate radiation dose to the desired target without damaging the normal tissues. By using the pre-treatment Computer Tomography (CT) images, most of the radiotherapy planning systems design the target and assume that the size of the tumor will not change throughout the treatment course, which takes 5 to 7 weeks. Based on this assumption, the total amount of radiation is planned and fractionated for the daily dose required to be delivered to the patient's body. However, this assumption is flawed because the patients receiving radiotherapy have marked changes in tumor geometry during the treatment period. Therefore, there is a critical need to understand the changes of the tumor shape and size over time during the course of radiotherapy in order to prevent significant effects of inaccuracy in the planning. In this research, a methodology is proposed in order to monitor and predict daily (fraction day) tumor volume and surface changes of head and neck cancer tumors during the entire treatment period. In the proposed method, geometrical modeling and data mining techniques will be used rather than repetitive CT scans data to predict the tumor deformation for radiation planning. Clinical patient data were obtained from the University of Texas-MD Anderson Cancer Center (MDACC). In the first step, by using CT scan data, the tumor's progressive geometric changes during the treatment period are quantified. The next step relates to using regression analysis in order to develop predictive models for tumor geometry based on the geometric analysis results and the patients' selected attributes (age, weight
NASA Astrophysics Data System (ADS)
Lankeit, Johannes; Neff, Patrizio; Osterbrink, Frank
2017-02-01
In this note, we extend integrability conditions for the symmetric stretch tensor U in the polar decomposition of the deformation gradient nabla φ =F=R U to the nonsymmetric case. In doing so, we recover integrability conditions for the first Cosserat deformation tensor. Let F=overline{R} overline{U} with overline{R}:Ω subset R^3longrightarrow {{SO}}(3) and overline{U}:Ω subset R^3longrightarrow GL(3). Then, K:=overline{R}^T{Grad} overline{R}={{Anti}}( Big [overline{U}({{Curl}}overline{U})^T-{1/2{{tr}}(overline{U}({{Curl}}overline{U})^T)/{1}Big ]overline{U}}{det overline{U}}), giving a connection between the first Cosserat deformation tensor overline{U} and the second Cosserat tensor K. (Here, {{Anti}} denotes an isomorphism between R^{3× 3} and So(3):= Ain R^{3× 3× 3} | A.uin so(3)forall uin R^3}). The formula shows that it is not possible to prescribe overline{U} and K independent from each other. We also propose a new energy formulation of geometrically nonlinear Cosserat models which completely separate the effects of nonsymmetric straining and curvature. For very weak constitutive assumptions (no direct boundary condition on rotations, zero Cosserat couple modulus, quadratic curvature energy), we show existence of minimizers in Sobolev spaces.
NASA Astrophysics Data System (ADS)
Niu, Xutong
Road extraction and vehicle detection are two of the most important steps of traffic flow analysis from multi-frame aerial photographs. The traditional way of deriving traffic flow trajectories relies on manual vehicle counting from a sequence of aerial photographs. It is tedious and time-consuming work. To improve this process, this research presents a new semi-automatic framework for highway extraction and vehicle detection from aerial photographs. The basis of the new framework is a geometric deformable model. This model refers to the minimization of an objective function that connects the optimization problem with the propagation of regular curves. Utilizing implicit representation of two-dimensional curve, the implementation of this model is capable of dealing with topological changes during curve deformation process and the output is independent of the position of the initial curves. A seed point propagation framework is designed and implemented. This framework incorporates highway extraction, tracking, and linking into one procedure. Manually selected seed points can be automatically propagated throughout a whole highway network. During the process, road center points are also extracted, which introduces a search direction for solving possible blocking problems. This new framework has been successfully applied to highway network extraction and vehicle detection from a large orthophoto mosaic. In this research, vehicles on the extracted highway network were detected with an 83% success rate.
Yang, Zhen; Bogovic, John A; Carass, Aaron; Ye, Mao; Searson, Peter C; Prince, Jerry L
2013-03-13
With the rapid development of microscopy for cell imaging, there is a strong and growing demand for image analysis software to quantitatively study cell morphology. Automatic cell segmentation is an important step in image analysis. Despite substantial progress, there is still a need to improve the accuracy, efficiency, and adaptability to different cell morphologies. In this paper, we propose a fully automatic method for segmenting cells in fluorescence images of confluent cell monolayers. This method addresses several challenges through a combination of ideas. 1) It realizes a fully automatic segmentation process by first detecting the cell nuclei as initial seeds and then using a multi-object geometric deformable model (MGDM) for final segmentation. 2) To deal with different defects in the fluorescence images, the cell junctions are enhanced by applying an order-statistic filter and principal curvature based image operator. 3) The final segmentation using MGDM promotes robust and accurate segmentation results, and guarantees no overlaps and gaps between neighboring cells. The automatic segmentation results are compared with manually delineated cells, and the average Dice coefficient over all distinguishable cells is 0.88.
A Geometric Classification of Jaw Deformities
Gateno, Jaime; Alfi, David; Xia, James J.; Teichgraeber, John F.
2015-01-01
In the United States, the most widely used classification system for jaw deformities is the one provided by the International Classification of Diseases, Clinical Modification (ICD-CM), a taxonomy scheme that is based on the World Health Organization's International Classification of Diseases (ICD). The last iteration of ICD-CM, version 10, sorts jaw deformities according to geometry, into 3 groups: anomalies of jaw size, anomalies of jaw-cranial base relationship, or unspecified. Yet these deformities can affect 6 different geometric attributes: size, position, orientation, shape, symmetry, and completeness. In clinical practice and in teaching we have found the ICD-CM classification to be incomplete and disjointed. With this in mind, we have developed a better classification system. The purpose of this paper is to present it. PMID:26608152
Descriptive Geometry and Geometric Modeling.
ERIC Educational Resources Information Center
Adams, J. Alan
1988-01-01
Describes experiences for engineering students to develop spatial awareness and reasoning capability. Describes geometric modeling, basic geometric concepts, operations, surface modeling, and conclusions. (YP)
NASA Astrophysics Data System (ADS)
Yin, Youbing; Hoffman, Eric A.; Ding, Kai; Reinhardt, Joseph M.; Lin, Ching-Long
2011-01-01
The goal of this study is to develop a matching algorithm that can handle large geometric changes in x-ray computed tomography (CT)-derived lung geometry occurring during deep breath maneuvers. These geometric relationships are further utilized to build a dynamic lung airway model for computational fluid dynamics (CFD) studies of pulmonary air flow. The proposed algorithm is based on a cubic B-spline-based hybrid registration framework that incorporates anatomic landmark information with intensity patterns. A sequence of invertible B-splines is composed in a multiresolution framework to ensure local invertibility of the large deformation transformation and a physiologically meaningful similarity measure is adopted to compensate for changes in voxel intensity due to inflation. Registrations are performed using the proposed approach to match six pairs of 3D CT human lung datasets. Results show that the proposed approach has the ability to match the intensity pattern and the anatomical landmarks, and ensure local invertibility for large deformation transformations. Statistical results also show that the proposed hybrid approach yields significantly improved results as compared with approaches using either landmarks or intensity alone.
Yin, Youbing; Hoffman, Eric A; Ding, Kai; Reinhardt, Joseph M; Lin, Ching-Long
2011-01-01
The goal of this study is to develop a matching algorithm that can handle large geometric changes in x-ray computed tomography (CT)-derived lung geometry occurring during deep breath maneuvers. These geometric relationships are further utilized to build a dynamic lung airway model for computational fluid dynamics (CFD) studies of pulmonary air flow. The proposed algorithm is based on a cubic B-spline-based hybrid registration framework that incorporates anatomic landmark information with intensity patterns. A sequence of invertible B-splines is composed in a multiresolution framework to ensure local invertibility of the large deformation transformation and a physiologically meaningful similarity measure is adopted to compensate for changes in voxel intensity due to inflation. Registrations are performed using the proposed approach to match six pairs of 3D CT human lung datasets. Results show that the proposed approach has the ability to match the intensity pattern and the anatomical landmarks, and ensure local invertibility for large deformation transformations. Statistical results also show that the proposed hybrid approach yields significantly improved results as compared with approaches using either landmarks or intensity alone. PMID:21149947
Yin, Youbing; Hoffman, Eric A; Ding, Kai; Reinhardt, Joseph M; Lin, Ching-Long
2011-01-07
The goal of this study is to develop a matching algorithm that can handle large geometric changes in x-ray computed tomography (CT)-derived lung geometry occurring during deep breath maneuvers. These geometric relationships are further utilized to build a dynamic lung airway model for computational fluid dynamics (CFD) studies of pulmonary air flow. The proposed algorithm is based on a cubic B-spline-based hybrid registration framework that incorporates anatomic landmark information with intensity patterns. A sequence of invertible B-splines is composed in a multiresolution framework to ensure local invertibility of the large deformation transformation and a physiologically meaningful similarity measure is adopted to compensate for changes in voxel intensity due to inflation. Registrations are performed using the proposed approach to match six pairs of 3D CT human lung datasets. Results show that the proposed approach has the ability to match the intensity pattern and the anatomical landmarks, and ensure local invertibility for large deformation transformations. Statistical results also show that the proposed hybrid approach yields significantly improved results as compared with approaches using either landmarks or intensity alone.
Chiral models: Geometrical aspects
NASA Astrophysics Data System (ADS)
Perelomov, A. M.
1987-02-01
Two-dimensional classical chiral models of field theory are considered, the main attention being paid on geometrical aspects of such theories. A characteristic feature of these models is that the interaction is inserted not by adding the interaction Lagrangian to the free field Lagrangian, but has a purely geometrical origin and is related to the inner curvature of the manifold. These models are in many respects analogous to non-Abelian gauge theories and as became clear recently, they are also important for the superstring theory which nowadays is the most probable candidate for a truly unified theory of all interactions including gravitation.
Pragmatic geometric model evaluation
NASA Astrophysics Data System (ADS)
Pamer, Robert
2015-04-01
Quantification of subsurface model reliability is mathematically and technically demanding as there are many different sources of uncertainty and some of the factors can be assessed merely in a subjective way. For many practical applications in industry or risk assessment (e. g. geothermal drilling) a quantitative estimation of possible geometric variations in depth unit is preferred over relative numbers because of cost calculations for different scenarios. The talk gives an overview of several factors that affect the geometry of structural subsurface models that are based upon typical geological survey organization (GSO) data like geological maps, borehole data and conceptually driven construction of subsurface elements (e. g. fault network). Within the context of the trans-European project "GeoMol" uncertainty analysis has to be very pragmatic also because of different data rights, data policies and modelling software between the project partners. In a case study a two-step evaluation methodology for geometric subsurface model uncertainty is being developed. In a first step several models of the same volume of interest have been calculated by omitting successively more and more input data types (seismic constraints, fault network, outcrop data). The positions of the various horizon surfaces are then compared. The procedure is equivalent to comparing data of various levels of detail and therefore structural complexity. This gives a measure of the structural significance of each data set in space and as a consequence areas of geometric complexity are identified. These areas are usually very data sensitive hence geometric variability in between individual data points in these areas is higher than in areas of low structural complexity. Instead of calculating a multitude of different models by varying some input data or parameters as it is done by Monte-Carlo-simulations, the aim of the second step of the evaluation procedure (which is part of the ongoing work) is to
NASA Astrophysics Data System (ADS)
Lin, Erica; Li, Yaning; Ortiz, Christine; Boyce, Mary C.
2014-12-01
Geometrically structured interfaces in nature possess enhanced, and often surprising, mechanical properties, and provide inspiration for materials design. This paper investigates the mechanics of deformation and failure mechanisms of suture interface designs through analytical models and experiments on 3D printed polymer physical prototypes. Suture waveforms with generalized trapezoidal geometries (trapezoidal, rectangular, anti-trapezoidal, and triangular) are studied and characterized by several important geometric parameters: the presence or absence of a bonded tip region, the tip angle, and the geometry. It is shown that a wide range (in some cases as great as an order of magnitude) in stiffness, strength, and toughness is achievable dependent on tip bonding, tip angle, and geometry. Suture interfaces with a bonded tip region exhibit a higher initial stiffness due to the greater load bearing by the skeletal teeth, a double peak in the stress-strain curve corresponding to the failure of the bonded tip and the failure of the slanted interface region or tooth, respectively, and an additional failure and toughening mechanism due to the failure of the bonded tip. Anti-trapezoidal geometries promote the greatest amplification of properties for suture interfaces with a bonded tip due the large tip interface area. The tip angle and geometry govern the stress distributions in the teeth and the ratio of normal to shear stresses in the interfacial layers, which together determine the failure mechanism of the interface and/or the teeth. Rectangular suture interfaces fail by simple shearing of the interfaces. Trapezoidal and triangular suture interfaces fail by a combination of shear and tensile normal stresses in the interface, leading to plastic deformation, cavitation events, and subsequent stretching of interface ligaments with mostly elastic deformation in the teeth. Anti-trapezoidal suture interfaces with small tip angles have high stress concentrations in the teeth
Deformable Subreflector Computed by Geometric Optics
NASA Technical Reports Server (NTRS)
Williams, W. F.
1986-01-01
Distorted antenna surfaces forced to produce a uniform wave front. SUBFORMING employs geometric optics in determining subreflector coordinates to match main reflector surface with known distortions. Antenna with distorted paraboloidal reflecting surface forced to produce uniform wave front by using a Cassegrainian geometry with path-length-compensating subreflector. Program written in FORTRAN V for batch execution.
Iris-based medical analysis by geometric deformation features.
Ma, Lin; Zhang, D; Li, Naimin; Cai, Yan; Zuo, Wangmeng; Wang, Kuanguan
2013-01-01
Iris analysis studies the relationship between human health and changes in the anatomy of the iris. Apart from the fact that iris recognition focuses on modeling the overall structure of the iris, iris diagnosis emphasizes the detecting and analyzing of local variations in the characteristics of irises. This paper focuses on studying the geometrical structure changes in irises that are caused by gastrointestinal diseases, and on measuring the observable deformations in the geometrical structures of irises that are related to roundness, diameter and other geometric forms of the pupil and the collarette. Pupil and collarette based features are defined and extracted. A series of experiments are implemented on our experimental pathological iris database, including manual clustering of both normal and pathological iris images, manual classification by non-specialists, manual classification by individuals with a medical background, classification ability verification for the proposed features, and disease recognition by applying the proposed features. The results prove the effectiveness and clinical diagnostic significance of the proposed features and a reliable recognition performance for automatic disease diagnosis. Our research results offer a novel systematic perspective for iridology studies and promote the progress of both theoretical and practical work in iris diagnosis.
Ye, Chuyang; Yang, Zhen; Ying, Sarah H; Prince, Jerry L
2015-07-01
The cerebellar peduncles, comprising the superior cerebellar peduncles (SCPs), the middle cerebellar peduncle (MCP), and the inferior cerebellar peduncles (ICPs), are white matter tracts that connect the cerebellum to other parts of the central nervous system. Methods for automatic segmentation and quantification of the cerebellar peduncles are needed for objectively and efficiently studying their structure and function. Diffusion tensor imaging (DTI) provides key information to support this goal, but it remains challenging because the tensors change dramatically in the decussation of the SCPs (dSCP), the region where the SCPs cross. This paper presents an automatic method for segmenting the cerebellar peduncles, including the dSCP. The method uses volumetric segmentation concepts based on extracted DTI features. The dSCP and noncrossing portions of the peduncles are modeled as separate objects, and are initially classified using a random forest classifier together with the DTI features. To obtain geometrically correct results, a multi-object geometric deformable model is used to refine the random forest classification. The method was evaluated using a leave-one-out cross-validation on five control subjects and four patients with spinocerebellar ataxia type 6 (SCA6). It was then used to evaluate group differences in the peduncles in a population of 32 controls and 11 SCA6 patients. In the SCA6 group, we have observed significant decreases in the volumes of the dSCP and the ICPs and significant increases in the mean diffusivity in the noncrossing SCPs, the MCP, and the ICPs. These results are consistent with a degeneration of the cerebellar peduncles in SCA6 patients.
Deformable subreflector computed by geometric optics
NASA Technical Reports Server (NTRS)
Katow, M. S.; Khan, I.; Williams, W. F.
1983-01-01
Using a Cassegrainian geometry, the 64-meter antenna with its distorted paraboloidal reflecting surface is forced to produce a uniform phase wavefront by a pathlength-compensating subreflector. First, the computed distortion vectors at the joints or nodes of the main reflector structure supporting the surface panels are best fitted to a paraboloid. Second, the resulting residual distortion errors are used to determine a compensating subreflector surface by ray tracing using geometric optics principles. Third, the totally corrected subreflector surface is defined by the normal directions and distances to the surface of the original symmetric hyperboloid for the purpose of evaluation. Finally, contour maps of distortions of the paraboloid reflector and the compensating subreflector are presented. A field-measured check of the subreflector in focused position as computed by the described methodology is also presented for the antenna position at horizon look with the geometry at 45 degrees elevation.
Geometric correction of deformed chromosomes for automatic Karyotyping.
Khan, Shadab; DSouza, Alisha; Sanches, João; Ventura, Rodrigo
2012-01-01
Automatic Karyotyping is the process of classifying chromosomes from an unordered karyogram into their respective classes to create an ordered karyogram. Automatic karyotyping algorithms typically perform geometrical correction of deformed chromosomes for feature extraction; these features are used by classifier algorithms for classifying the chromosomes. Karyograms of bone marrow cells are known to have poor image quality. An example of such karyograms is the Lisbon-K(1) (LK(1)) dataset that is used in our work. Thus, to correct the geometrical deformation of chromosomes from LK(1), a robust method to obtain the medial axis of the chromosome was necessary. To address this problem, we developed an algorithm that uses the seed points to make a primary prediction. Subsequently, the algorithm computes the distance of boundary from the predicted point, and the gradients at algorithm-specified points on the boundary to compute two auxiliary predictions. Primary prediction is then corrected using auxiliary predictions, and a final prediction is obtained to be included in the seed region. A medial axis is obtained this way, which is further used for geometrical correction of the chromosomes. This algorithm was found capable of correcting geometrical deformations in even highly distorted chromosomes with forked ends.
Black hole acoustics in the minimal geometric deformation of a de Laval nozzle
NASA Astrophysics Data System (ADS)
da Rocha, Roldão
2017-05-01
The correspondence between sound waves, in a de Laval propelling nozzle, and quasinormal modes emitted by brane-world black holes deformed by a 5D bulk Weyl fluid are here explored and scrutinized. The analysis of sound waves patterns in a de Laval nozzle in the laboratory, reciprocally, is here shown to provide relevant data about the 5D bulk Weyl fluid and its on-brane projection, comprised by the minimal geometrically deformed compact stellar distribution on the brane. Acoustic perturbations of the gas fluid flow in the de Laval nozzle are proved to coincide with the quasinormal modes of black holes solutions deformed by the 5D Weyl fluid, in the geometric deformation procedure. Hence, in a phenomenological Eötvös-Friedmann fluid brane-world model, the realistic shape of a de Laval nozzle is derived and its consequences studied.
Geometric modeling of pelvic organs with thickness
NASA Astrophysics Data System (ADS)
Bay, T.; Chen, Z.-W.; Raffin, R.; Daniel, M.; Joli, P.; Feng, Z.-Q.; Bellemare, M.-E.
2012-03-01
Physiological changes in the spatial configuration of the internal organs in the abdomen can induce different disorders that need surgery. Following the complexity of the surgical procedure, mechanical simulations are necessary but the in vivo factor makes complicate the study of pelvic organs. In order to determine a realistic behavior of these organs, an accurate geometric model associated with a physical modeling is therefore required. Our approach is integrated in the partnership between a geometric and physical module. The Geometric Modeling seeks to build a continuous geometric model: from a dataset of 3D points provided by a Segmentation step, surfaces are created through a B-spline fitting process. An energy function is built to measure the bidirectional distance between surface and data. This energy is minimized with an alternate iterative Hoschek-like method. A thickness is added with an offset formulation, and the geometric model is finally exported in a hexahedral mesh. Afterward, the Physical Modeling tries to calculate the properties of the soft tissues to simulate the organs displacements. The physical parameters attached to the data are determined with a feedback loop between finite-elements deformations and ground-truth acquisition (dynamic MRI).
Material and Geometric Analysis of Structures Subjected to Large Deformation
NASA Astrophysics Data System (ADS)
Ferranto, Justin
The two major focuses of this dissertation are: (1) Studying the structural behaviors of hyper-elastic membranes subjected to extremely large deformation. These membranes are used in a reconfigurable tooling system (RTS) which was under development during the course of this study. (2) Establishing a continuum constitutive model for fabric materials under in-plane large deformation through theoretical and numerical analyses. This model may also be applied to study a class of materials which involve significant internal structure reconfiguration during deformation. The RTS allows quick onsite fabrication of high temperature composite parts. RTS applications include rapid onsite repair of aircraft components. The RTS uses a hyperelastic membrane as an interface between the state-change material and model. This membrane may be subjected to 800% engineering strain during operation. In this part of the study, material properties of the membranes have been characterized through three tests: simple tension, equal biaxial tension and planar tension. Nine-term Money-Rivlin constants are obtained through data regression. Finite element simulations have been conducted to simulate the deformed shapes of a membrane around several representative geometries under various vacuum pressure and constraint conditions. Experimental results have been compared with predictions from finite element simulations. This study contributes to understanding the behavior of membrane structures under large deformations in general; the results are used to generate design guidelines for RTS applicability. Fabric materials are widely used in industry for numerous applications. They exhibit a meso-scale complexity and involve significant internal structure reconfiguration during large deformation, which prohibits the direct application of the theory of continuum mechanics when studying these materials. In the second part of this work, a unique meso-scale FEA model, utilizing new modeling techniques and
Supersymmetric chiral models: Geometrical aspects
NASA Astrophysics Data System (ADS)
Perelomov, A. M.
1989-03-01
We consider classical supersymmetric chiral models of field theory and focus our attention on the geometrical aspects of such theories. A characteristic feature of such models is that the interaction is not introduced by adding the interaction Lagrangian to the free field Lagrangian, but has a purely geometrical origin and is related to the inner curvature of the target manifold. In many aspects these models are analogous to gauge theories and, as became clear recently, they are also important for superstring theory, which nowadays is the most probable candidate for a truly unified theory of all interactions including gravitation.
Geometrical modelling of textile reinforcements
NASA Technical Reports Server (NTRS)
Pastore, Christopher M.; Birger, Alexander B.; Clyburn, Eugene
1995-01-01
The mechanical properties of textile composites are dictated by the arrangement of yarns contained with the material. Thus to develop a comprehensive understanding of the performance of these materials, it is necessary to develop a geometrical model of the fabric structure. This task is quite complex, as the fabric is made form highly flexible yarn systems which experience a certain degree of compressability. Furthermore there are tremendous forces acting on the fabric during densification typically resulting in yarn displacement and misorientation. The objective of this work is to develop a methodology for characterizing the geometry of yarns within a fabric structure including experimental techniques for evaluating these models. Furthermore, some applications of these geometric results to mechanical prediction models are demonstrated. Although more costly than its predecessors, the present analysis is based on the detailed architecture developed by one of the authors and his colleagues and accounts for many of the geometric complexities that other analyses ignore.
ERIC Educational Resources Information Center
Nika, G. Gerald; Parameswaran, R.
1997-01-01
Describes a visual approach for explaining the filling of electrons in the shells, subshells, and orbitals of the chemical elements. Enables students to apply the principles of atomic electron configuration while using manipulatives to model the building up of electron configurations as the atomic numbers of elements increase on the periodic…
ERIC Educational Resources Information Center
Nika, G. Gerald; Parameswaran, R.
1997-01-01
Describes a visual approach for explaining the filling of electrons in the shells, subshells, and orbitals of the chemical elements. Enables students to apply the principles of atomic electron configuration while using manipulatives to model the building up of electron configurations as the atomic numbers of elements increase on the periodic…
Global Geometric Deformations of Current Algebras as Krichever-Novikov Type Algebras
NASA Astrophysics Data System (ADS)
Fialowski, Alice; Schlichenmaier, Martin
2005-12-01
We construct algebraic-geometric families of genus one (i.e. elliptic) current and affine Lie algebras of Krichever-Novikov type. These families deform the classical current, respectively affine Kac-Moody Lie algebras. The construction is induced by the geometric process of degenerating the elliptic curve to singular cubics. If the finite-dimensional Lie algebra defining the infinite dimensional current algebra is simple then, even if restricted to local families, the constructed families are non-equivalent to the trivial family. In particular, we show that the current algebra is geometrically not rigid, despite its formal rigidity. This shows that in the infinite dimensional Lie algebra case the relations between geometric deformations, formal deformations and Lie algebra two-cohomology are not that close as in the finite-dimensional case. The constructed families are e.g. of relevance in the global operator approach to the Wess-Zumino-Witten-Novikov models appearing in the quantization of Conformal Field Theory. The algebras are explicitly given by generators and structure equations and yield new examples of infinite dimensional algebras of current and affine Lie algebra type.
Geometrical modelling of textile reinforcements
NASA Technical Reports Server (NTRS)
Pastore, Christopher M.; Birger, Alexander B.; Clyburn, Eugene
1995-01-01
The mechanical properties of textile composites are dictated by the arrangement of yarns contained within the material. Thus, to develop a comprehensive understanding of the performance of these materials, it is necessary to develop a geometrical model of the fabric structure. This task is quite complex, as the fabric is made from highly flexible yarn systems which experience a certain degree of compressibility. Furthermore there are tremendous forces acting on the fabric during densification typically resulting in yarn displacement and misorientation. The objective of this work is to develop a methodology for characterizing the geometry of yarns within a fabric structure including experimental techniques for evaluating these models. Furthermore, some applications of these geometric results to mechanical property predictions models are demonstrated.
Geometric Modelling of Octagonal Lamp Poles
NASA Astrophysics Data System (ADS)
Chan, T. O.; Lichti, D. D.
2014-06-01
Lamp poles are one of the most abundant highway and community components in modern cities. Their supporting parts are primarily tapered octagonal cones specifically designed for wind resistance. The geometry and the positions of the lamp poles are important information for various applications. For example, they are important to monitoring deformation of aged lamp poles, maintaining an efficient highway GIS system, and also facilitating possible feature-based calibration of mobile LiDAR systems. In this paper, we present a novel geometric model for octagonal lamp poles. The model consists of seven parameters in which a rotation about the z-axis is included, and points are constrained by the trigonometric property of 2D octagons after applying the rotations. For the geometric fitting of the lamp pole point cloud captured by a terrestrial LiDAR, accurate initial parameter values are essential. They can be estimated by first fitting the points to a circular cone model and this is followed by some basic point cloud processing techniques. The model was verified by fitting both simulated and real data. The real data includes several lamp pole point clouds captured by: (1) Faro Focus 3D and (2) Velodyne HDL-32E. The fitting results using the proposed model are promising, and up to 2.9 mm improvement in fitting accuracy was realized for the real lamp pole point clouds compared to using the conventional circular cone model. The overall result suggests that the proposed model is appropriate and rigorous.
4-D facial expression recognition by learning geometric deformations.
Ben Amor, Boulbaba; Drira, Hassen; Berretti, Stefano; Daoudi, Mohamed; Srivastava, Anuj
2014-12-01
In this paper, we present an automatic approach for facial expression recognition from 3-D video sequences. In the proposed solution, the 3-D faces are represented by collections of radial curves and a Riemannian shape analysis is applied to effectively quantify the deformations induced by the facial expressions in a given subsequence of 3-D frames. This is obtained from the dense scalar field, which denotes the shooting directions of the geodesic paths constructed between pairs of corresponding radial curves of two faces. As the resulting dense scalar fields show a high dimensionality, Linear Discriminant Analysis (LDA) transformation is applied to the dense feature space. Two methods are then used for classification: 1) 3-D motion extraction with temporal Hidden Markov model (HMM) and 2) mean deformation capturing with random forest. While a dynamic HMM on the features is trained in the first approach, the second one computes mean deformations under a window and applies multiclass random forest. Both of the proposed classification schemes on the scalar fields showed comparable results and outperformed earlier studies on facial expression recognition from 3-D video sequences.
NASA Technical Reports Server (NTRS)
Librescu, L.; Stein, M.
1990-01-01
The effects of initial geometrical imperfections on the postbuckling response of flat laminated composite panels to uniaxial and biaxial compressive loading are investigated analytically. The derivation of the mathematical model on the basis of first-order transverse shear deformation theory is outlined, and numerical results for perfect and imperfect, single-layer and three-layer square plates with free-free, clamped-clamped, or free-clamped edges are presented in graphs and briefly characterized. The present approach is shown to be more accurate than analyses based on the classical Kirchhoff plate model.
NASA Astrophysics Data System (ADS)
Pallozzi Lavorante, Luca; Dirk Ebert, Hans
2008-07-01
Tensor3D is a geometric modeling program with the capacity to simulate and visualize in real-time the deformation, specified through a tensor matrix and applied to triangulated models representing geological bodies. 3D visualization allows the study of deformational processes that are traditionally conducted in 2D, such as simple and pure shears. Besides geometric objects that are immediately available in the program window, the program can read other models from disk, thus being able to import objects created with different open-source or proprietary programs. A strain ellipsoid and a bounding box are simultaneously shown and instantly deformed with the main object. The principal axes of strain are visualized as well to provide graphical information about the orientation of the tensor's normal components. The deformed models can also be saved, retrieved later and deformed again, in order to study different steps of progressive strain, or to make this data available to other programs. The shape of stress ellipsoids and the corresponding Mohr circles defined by any stress tensor can also be represented. The application was written using the Visualization ToolKit, a powerful scientific visualization library in the public domain. This development choice, allied to the use of the Tcl/Tk programming language, which is independent on the host computational platform, makes the program a useful tool for the study of geometric deformations directly in three dimensions in teaching as well as research activities.
Compensation of geometrical deformations for watermark extraction in digital cinema application
NASA Astrophysics Data System (ADS)
Delannay, Damien; Delaigle, Jean-Francois; Macq, Benoit M. M.; Barlaud, Michel
2001-08-01
In this paper, we investigate the restoration of geometrically altered digital images with the aim of recovering an embedded watermark information. More precisely, we focus on the distorsion taking place by the camera acquisition of an image. Indeed, in the cinema industry, a large part of early movie piracy comes from copies made in the theater itself with a camera. The evolution towards digital cinema broadcast enables watermark based fingerprinting protection systems. The first step for fingerprint extraction of a counterfeit material is the compensation of the geometrical deformation inherent to the acquisition process. In order to compensate the deformations, we use a modified 12-parameters bilinear transformation model which closely matches the deformations taking place by an analog acquisition process. The estimation of the parameters can either be global, either vary across regions within the image. Our approach consist in the estimation of the displacement of a number of of pixels via a modified block-matching technique followed by a minimum mean square error optimization of the parameters on basis of those estimated displacement-vectors. The estimated transformation is applied to the candidate image to get a reconstruction as close as possible to the original image. Classical watermark extraction procedure can follow.
NASA Astrophysics Data System (ADS)
Fialowski, A.; Schlichenmaier, M.
2007-11-01
In two earlier articles we constructed algebraic-geometric families of genus one (i.e. elliptic) Lie algebras of Krichever Novikov type. The considered algebras are vector fields, current and affine Lie algebras. These families deform the Witt algebra, the Virasoro algebra, the classical current, and the affine Kac Moody Lie algebras respectively. The constructed families are not equivalent (not even locally) to the trivial families, despite the fact that the classical algebras are formally rigid. This effect is due to the fact that the algebras are infinite dimensional. In this article the results are reviewed and developed further. The constructions are induced by the geometric process of degenerating the elliptic curves to singular cubics. The algebras are of relevance in the global operator approach to the Wess Zumino Witten Novikov models appearing in the quantization of Conformal Field Theory.
Kuprat, A.; George, D.
1998-12-01
When modeling deformation of geometrically complex regions, unstructured tetrahedral meshes provide the flexibility necessary to track interfaces as they change geometrically and topologically. In the class of time-dependent simulations considered in this paper, multimaterial interfaces are represented by sets of triangular facets, and motion of the interfaces is controlled by physical considerations. The motion of interior points in the conforming tetrahedral mesh (i.e., points not on interfaces) is arbitrary and may be chosen to produce good element shapes. In the context of specified boundary motion driven by physical considerations, they have found that a rather large glossary of mesh changes is required to allow the simulation to survive all the transitions of interface geometry and topology that occur during time evolution. This paper will describe mesh changes required to maintain good element quality as the geometry evolves, as well as mesh changes required to capture changes i n topology that occur when material regions collapse or pinch off. This paper will present a detailed description of mesh changes necessary for capturing the aforementioned geometrical and topological changes, as implemented in the code GRAIN3D, and will provide examples from a metallic grain growth simulation in which the normal velocity of the grain boundary is proportional to mean curvature.
Some technical issues in geometric modeling
Peterson, D.P.
1983-01-01
The full impact of CAD/CAM will not be felt until geometric modeling systems support dimensioning and tolerancing, have sophisticated user interfaces, and are capable of routinely handling many representation conversions. The attainment of these capabilities requires a joint effort among users, implementors, and theoreticians of geometric modeling.
Geometric effects in the electronic transport of deformed nanotubes
NASA Astrophysics Data System (ADS)
Santos, Fernando; Fumeron, Sébastien; Berche, Bertrand; Moraes, Fernando
2016-04-01
Quasi-two-dimensional systems may exibit curvature, which adds three-dimensional influence to their internal properties. As shown by da Costa (1981 Phys. Rev. A 23 1982-7), charged particles moving on a curved surface experience a curvature-dependent potential which greatly influence their dynamics. In this paper, we study the electronic ballistic transport in deformed nanotubes. The one-electron Schrödinger equation with open boundary conditions is solved numerically with a flexible MAPLE code made available as supplementary data. We find that the curvature of the deformations indeed has strong effects on the electron dynamics, suggesting its use in the design of nanotube-based electronic devices.
A geometric exploration of stress in deformed liquid foams
NASA Astrophysics Data System (ADS)
Evans, Myfanwy E.; Schröder-Turk, Gerd E.; Kraynik, Andrew M.
2017-03-01
We explore an alternate way of looking at the rheological response of a yield stress fluid: using discrete geometry to probe the heterogeneous distribution of stress in soap froth. We present quasi-static, uniaxial, isochoric compression and extension of three-dimensional random monodisperse soap froth in periodic boundary conditions and examine the stress and geometry that result. The stress and shape anisotropy of individual cells is quantified by Q, a scalar measure derived from the interface tensor that gauges each cell’s contribution to the global stress. Cumulatively, the spatial distribution of highly deformed cells allows us to examine how stress is internally distributed. The topology of highly deformed cells, how they arrange relative to one another in space, gives insight into the heterogeneous distribution of stress.
Advanced deformation process modeling
Kocks, U.F.; Embury, J.D.; Beaudoin, A.J.; Dawson, P.R.; MacEwen, S.R.; Mecking, H.J.
1997-08-01
Progress was made in achieving a comprehensive and coherent description of material behavior in deformation processing. The materials included were metals, alloys, intermetallic compounds, arbitrary lattice structure, and metal matrix composites. Aspects of behavior modeled included kinetics of flow and strain hardening, as well as recrystallization and the various anisotropies of strength and compliance. Highlights include a new prediction of the limiting strength of materials at high temperature, a new understanding of the generation of new grain boundaries during forming operations, and a quantitatively verified computer simulation of texture development and the resulting behavioral anisotropies.
a Visualization Model of Flower Based on Deformation
NASA Astrophysics Data System (ADS)
Lu, Ling; Wang, Lei; Yang, Xuedong
We present a simple and effective modeling method for flowers. It starts with an initial geometric shape, such as ellipsoid, cylinder, or plane surface et al., and then simulates flower components (such as pedicel, receptacle, pistils, stamens, petals and sepals) by addition deformation to the basic geometric shape. The detailed geometry of flower component is defined by basic equation for the basic shape along with a deformation function. A variety of flower can be produced by varying the deformation parameters. A number of examples are given in the paper to demonstrate the effectiveness of the proposed model.
Geometric sigma model of the Universe
NASA Astrophysics Data System (ADS)
Vasilić, Milovan
2017-05-01
The purpose of this work is to demonstrate how an arbitrarily chosen background of the Universe can be made a solution of a simple geometric sigma model. Geometric sigma models are purely geometric theories in which spacetime coordinates are seen as scalar fields coupled to gravity. Although they look like ordinary sigma models, they have the peculiarity that their complete matter content can be gauged away. The remaining geometric theory possesses a background solution that is predefined in the process of constructing the theory. The fact that background configuration is specified in advance is another peculiarity of geometric sigma models. In this paper, I construct geometric sigma models based on different background geometries of the Universe. Whatever background geometry is chosen, the dynamics of its small perturbations is shown to have a generic classical stability. This way, any freely chosen background metric is made a stable solution of a simple model. Three particular models of the Universe are considered as examples of how this is done in practice. Supported by Serbian Ministry of Education, Science and Technological Development (171031)
NASA Astrophysics Data System (ADS)
Deng, Zhipeng; Lei, Lin; Zhou, Shilin
2015-10-01
Automatic image registration is a vital yet challenging task, particularly for non-rigid deformation images which are more complicated and common in remote sensing images, such as distorted UAV (unmanned aerial vehicle) images or scanning imaging images caused by flutter. Traditional non-rigid image registration methods are based on the correctly matched corresponding landmarks, which usually needs artificial markers. It is a rather challenging task to locate the accurate position of the points and get accurate homonymy point sets. In this paper, we proposed an automatic non-rigid image registration algorithm which mainly consists of three steps: To begin with, we introduce an automatic feature point extraction method based on non-linear scale space and uniform distribution strategy to extract the points which are uniform distributed along the edge of the image. Next, we propose a hybrid point matching algorithm using DaLI (Deformation and Light Invariant) descriptor and local affine invariant geometric constraint based on triangulation which is constructed by K-nearest neighbor algorithm. Based on the accurate homonymy point sets, the two images are registrated by the model of TPS (Thin Plate Spline). Our method is demonstrated by three deliberately designed experiments. The first two experiments are designed to evaluate the distribution of point set and the correctly matching rate on synthetic data and real data respectively. The last experiment is designed on the non-rigid deformation remote sensing images and the three experimental results demonstrate the accuracy, robustness, and efficiency of the proposed algorithm compared with other traditional methods.
Connexions for the nuclear geometrical collective model
NASA Astrophysics Data System (ADS)
Rosensteel, G.; Sparks, N.
2015-11-01
The Bohr-Mottelson-Frankfurt model of nuclear rotations and quadrupole vibrations is a foundational model in nuclear structure physics. The model, also called the geometrical collective model or simply GCM(3), has two hidden mathematical structures, one group theoretic and the other differential geometric. Although the group structure has been understood for some time, the geometric structure is a new feature that this paper investigates in some detail. Using the de Rham Laplacian \\triangle =\\star d \\star d for the kinetic energy extends significantly the physical scope of the GCM(3) model. This Laplacian contains a ‘magnetic’ term due to the connexion between base manifold rotational and fibre vortex degrees of freedom. When the connexion specializes to irrotational flow, the Laplacian reduces to the Bohr-Mottelson kinetic energy operator.
NASA Technical Reports Server (NTRS)
Ko, William L.; Fleischer, Van Tran; Lung, Shun-Fat
2017-01-01
For shape predictions of structures under large geometrically nonlinear deformations, Curved Displacement Transfer Functions were formulated based on a curved displacement, traced by a material point from the undeformed position to deformed position. The embedded beam (depth-wise cross section of a structure along a surface strain-sensing line) was discretized into multiple small domains, with domain junctures matching the strain-sensing stations. Thus, the surface strain distribution could be described with a piecewise linear or a piecewise nonlinear function. The discretization approach enabled piecewise integrations of the embedded-beam curvature equations to yield the Curved Displacement Transfer Functions, expressed in terms of embedded beam geometrical parameters and surface strains. By entering the surface strain data into the Displacement Transfer Functions, deflections along each embedded beam can be calculated at multiple points for mapping the overall structural deformed shapes. Finite-element linear and nonlinear analyses of a tapered cantilever tubular beam were performed to generate linear and nonlinear surface strains and the associated deflections to be used for validation. The shape prediction accuracies were then determined by comparing the theoretical deflections with the finiteelement- generated deflections. The results show that the newly developed Curved Displacement Transfer Functions are very accurate for shape predictions of structures under large geometrically nonlinear deformations.
Geometric Models for Collaborative Search and Filtering
ERIC Educational Resources Information Center
Bitton, Ephrat
2011-01-01
This dissertation explores the use of geometric and graphical models for a variety of information search and filtering applications. These models serve to provide an intuitive understanding of the problem domains and as well as computational efficiencies to our solution approaches. We begin by considering a search and rescue scenario where both…
Geometric Models for Collaborative Search and Filtering
ERIC Educational Resources Information Center
Bitton, Ephrat
2011-01-01
This dissertation explores the use of geometric and graphical models for a variety of information search and filtering applications. These models serve to provide an intuitive understanding of the problem domains and as well as computational efficiencies to our solution approaches. We begin by considering a search and rescue scenario where both…
Videogrammetric Model Deformation Measurement Technique
NASA Technical Reports Server (NTRS)
Burner, A. W.; Liu, Tian-Shu
2001-01-01
The theory, methods, and applications of the videogrammetric model deformation (VMD) measurement technique used at NASA for wind tunnel testing are presented. The VMD technique, based on non-topographic photogrammetry, can determine static and dynamic aeroelastic deformation and attitude of a wind-tunnel model. Hardware of the system includes a video-rate CCD camera, a computer with an image acquisition frame grabber board, illumination lights, and retroreflective or painted targets on a wind tunnel model. Custom software includes routines for image acquisition, target-tracking/identification, target centroid calculation, camera calibration, and deformation calculations. Applications of the VMD technique at five large NASA wind tunnels are discussed.
Yang-Mills generalization of the geometrical collective model
NASA Astrophysics Data System (ADS)
Rosensteel, George; Sparks, Nick
2015-04-01
The geometrical or Bohr-Mottelson model is generalized and recast as a Yang-Mills theory. The gauge symmetry determines conservation of Kelvin circulation. The circulation commutes with the Hamiltonian when it is the sum of the kinetic energy and a potential that depends only on deformation. The conventional Bohr-Mottelson model is the special case of circulation zero, and wave functions are complex-valued. In the generalization, any quantized value of the circulation is allowed, and the wave functions are vector-valued. The Yang-Mills formulation introduces a new coupling between the geometrical and intrinsic degrees of freedom. The coupling appears in the covariant derivative term of the collective kinetic energy. This kind of coupling is sometimes called ``magnetic'' because of the analogy with electrodynamics.
Symmetries and deformations in the spherical shell model
NASA Astrophysics Data System (ADS)
Van Isacker, P.; Pittel, S.
2016-02-01
We discuss symmetries of the spherical shell model that make contact with the geometric collective model of Bohr and Mottelson. The most celebrated symmetry of this kind is SU(3), which is the basis of Elliott’s model of rotation. It corresponds to a deformed mean field induced by a quadrupole interaction in a single major oscillator shell N and can be generalized to include several major shells. As such, Elliott’s SU(3) model establishes the link between the spherical shell model and the (quadrupole component of the) geometric collective model. We introduce the analogue symmetry induced by an octupole interaction in two major oscillator shells N-1 and N, leading to an octupole-deformed solution of the spherical shell model. We show that in the limit of large oscillator shells, N\\to ∞ , the algebraic octupole interaction tends to that of the geometric collective model.
Brane-world stars from minimal geometric deformation, and black holes
NASA Astrophysics Data System (ADS)
Casadio, Roberto; Ovalle, Jorge
2014-02-01
Using the effective four-dimensional Einstein field equations, we build analytical models of spherically symmetric stars in the brane-world, in which the external space-time contains both an ADM mass and a tidal charge. In order to determine the interior geometry, we apply the principle of minimal geometric deformation, which allows one to map general relativistic solutions to solutions of the effective four-dimensional brane-world equations. We further restrict our analysis to stars with a radius linearly related to the total general relativistic mass, and obtain a general relation between the latter, the brane-world ADM mass and the tidal charge. In these models, the value of the star's radius can then be taken to zero smoothly, thus obtaining brane-world black hole metrics with a tidal charge solely determined by the mass of the source and the brane tension. We find configurations which entail a partial screening of the gravitational mass, and general conclusions regarding the minimum mass for semiclassical black holes are also drawn.
Model-based vision using geometric hashing
NASA Astrophysics Data System (ADS)
Akerman, Alexander, III; Patton, Ronald
1991-04-01
The Geometric Hashing technique developed by the NYU Courant Institute has been applied to various automatic target recognition applications. In particular, I-MATH has extended the hashing algorithm to perform automatic target recognition ofsynthetic aperture radar (SAR) imagery. For this application, the hashing is performed upon the geometric locations of dominant scatterers. In addition to being a robust model-based matching algorithm -- invariant under translation, scale, and 3D rotations of the target -- hashing is of particular utility because it can still perform effective matching when the target is partially obscured. Moreover, hashing is very amenable to a SIMD parallel processing architecture, and thus potentially realtime implementable.
A geometric analysis of surface deformation - Implications for the tectonic evolution of Ganymede
NASA Technical Reports Server (NTRS)
Zuber, M. T.; Parmentier, E. M.
1984-01-01
The identification of various types of surface deformation of Ganymede by a geometric study of the furrow system and an analysis of circularity of impact craters is addressed. The hypothesis that the furrow system was initially concentric and that the present configuration of the furrows provides a measure of lateral motion of dark terrain is tested by determining the present centers of the furrow system in several dark terrain blocks and observing the amount of deformation in bright terrain regions which separate these blocks. An upper scale limit is placed on the amount of extension associated with bright terrain formation by using the deviation from circularity of impact craters to calculate the strain field around wedge-shaped regions of bright terrain. Penetrative deformation in Ganymede's lithosphere is identified by examining the circularity of impact craters in dark terrain.
Geometrical study of the deformations of a thin spherical shell inspired by pollen grains.
NASA Astrophysics Data System (ADS)
Couturier, Etienne; Katifori, Eleni; Dumais, Jacques; Cerda, Enrique
2013-03-01
Various monocotyledon pollen grains have a geometric design. They are constituted by a stiff thin shell with an n-fold rotationally symmetric softer sector. The mechanic response of these inhomogeneous shells can be approximated as an open shell. Isometric modes are known to be energetically favorable for thin shells when they are possible. Although the literature for the complete sphere, for which these modes are impossible, is extensive, analyses of the deformation of open shells whose isometric deformations are not inhibited, are much more scarce. We focus on the isometric deformation of spheres with n-fold rotationally symmetric openings. The isometric deformation means that the surface remains a constant gaussian curvature surface. Using differential geometry, we obtained an integrable family of surfaces whose gaussian curvature remains approximatively constant. We performed both simulations by tethered mesh methods and experiments with cut ping-pong balls. We observe that first the shell surface deforms without any stretching and is very well described as a part of an approximative constant gaussian curvature surface whose singularities remain outside the shell surface and get closer to the shell surface as the load increases.
Non-geometric fluxes, quasi-Hopf twist deformations, and nonassociative quantum mechanics
Mylonas, Dionysios Szabo, Richard J.; Schupp, Peter
2014-12-15
We analyse the symmetries underlying nonassociative deformations of geometry in non-geometric R-flux compactifications which arise via T-duality from closed strings with constant geometric fluxes. Starting from the non-abelian Lie algebra of translations and Bopp shifts in phase space, together with a suitable cochain twist, we construct the quasi-Hopf algebra of symmetries that deforms the algebra of functions and the exterior differential calculus in the phase space description of nonassociative R-space. In this setting, nonassociativity is characterised by the associator 3-cocycle which controls non-coassociativity of the quasi-Hopf algebra. We use abelian 2-cocycle twists to construct maps between the dynamical nonassociative star product and a family of associative star products parametrized by constant momentum surfaces in phase space. We define a suitable integration on these nonassociative spaces and find that the usual cyclicity of associative noncommutative deformations is replaced by weaker notions of 2-cyclicity and 3-cyclicity. Using this star product quantization on phase space together with 3-cyclicity, we formulate a consistent version of nonassociative quantum mechanics, in which we calculate the expectation values of area and volume operators, and find coarse-graining of the string background due to the R-flux.
Geometric modeling for computer aided design
NASA Technical Reports Server (NTRS)
Schwing, James L.
1993-01-01
Over the past several years, it has been the primary goal of this grant to design and implement software to be used in the conceptual design of aerospace vehicles. The work carried out under this grant was performed jointly with members of the Vehicle Analysis Branch (VAB) of NASA LaRC, Computer Sciences Corp., and Vigyan Corp. This has resulted in the development of several packages and design studies. Primary among these are the interactive geometric modeling tool, the Solid Modeling Aerospace Research Tool (smart), and the integration and execution tools provided by the Environment for Application Software Integration and Execution (EASIE). In addition, it is the purpose of the personnel of this grant to provide consultation in the areas of structural design, algorithm development, and software development and implementation, particularly in the areas of computer aided design, geometric surface representation, and parallel algorithms.
a Modular Geometric Model for Underwater Photogrammetry
NASA Astrophysics Data System (ADS)
Maas, H.-G.
2015-04-01
Underwater applications of photogrammetric measurement techniques usually need to deal with multimedia photogrammetry aspects, which are characterized by the necessity of handling optical rays that are broken at interfaces between optical media with different refrative indices according to Snell's Law. This so-called multimedia geometry has to be incorporated into geometric models in order to achieve correct measurement results. The paper shows a flexible yet strict geometric model for the handling of refraction effects on the optical path, which can be implemented as a module into photogrammetric standard tools such as spatial resection, spatial intersection, bundle adjustment or epipolar line computation. The module is especially well suited for applications, where an object in water is observed by cameras in air through one or more plane parallel glass interfaces, as it allows for some simplifications here.
Overview of geometrical room acoustic modeling techniques.
Savioja, Lauri; Svensson, U Peter
2015-08-01
Computerized room acoustics modeling has been practiced for almost 50 years up to date. These modeling techniques play an important role in room acoustic design nowadays, often including auralization, but can also help in the construction of virtual environments for such applications as computer games, cognitive research, and training. This overview describes the main principles, landmarks in the development, and state-of-the-art for techniques that are based on geometrical acoustics principles. A focus is given to their capabilities to model the different aspects of sound propagation: specular vs diffuse reflections, and diffraction.
A regression method for modelling geometric rates.
Bottai, Matteo
2015-09-18
The occurrence of an event of interest over time is often summarized by the incidence rate, defined as the average number of events per person-time. This type of rate applies to events that may occur repeatedly over time on any given subject, such as infections, and Poisson regression represents a natural regression method for modelling the effect of covariates on it. However, for events that can occur only once, such as death, the geometric rate may be a better summary measure. The geometric rate has long been utilized in demography for studying the growth of populations and in finance to compute compound interest on capital. This type of rate, however, is virtually unknown to medical research. This may be partly a consequence of the lack of a regression method for it. This paper describes a regression method for modelling the effect of covariates on the geometric rate. The described method is based on applying quantile regression to a transform of the time-to-event variable. The proposed method is used to analyze mortality in a randomized clinical trial and in an observational epidemiological study.
Deformed Richardson-Gaudin model
NASA Astrophysics Data System (ADS)
Kulish, P.; Stolin, A.; Johannesson, L. H.
2014-09-01
The Richardson-Gaudin model describes strong pairing correlations of fermions confined to a finite chain. The integrability of the Hamiltonian allows the algebraic construction of its eigenstates. In this work we show that the quantum group theory provides a possibility to deform the Hamiltonian preserving integrability. More precisely, we use the so-called Jordanian r-matrix to deform the Hamiltonian of the Richardson-Gaudin model. In order to preserve its integrability, we need to insert a special nilpotent term into the auxiliary L-operator which generates integrals of motion of the system. Moreover, the quantum inverse scattering method enables us to construct the exact eigenstates of the deformed Hamiltonian. These states have a highly complex entanglement structure which require further investigation.
NASA Astrophysics Data System (ADS)
Bardella, Lorenzo
2006-01-01
We propose a deformation theory of strain gradient crystal plasticity that accounts for the density of geometrically necessary dislocations by including, as an independent kinematic variable, Nye's dislocation density tensor [1953. Acta Metallurgica 1, 153-162]. This is accomplished in the same fashion as proposed by Gurtin and co-workers (see, for instance, Gurtin and Needleman [2005. J. Mech. Phys. Solids 53, 1-31]) in the context of a flow theory of crystal plasticity, by introducing the so-called defect energy. Moreover, in order to better describe the strengthening accompanied by diminishing size, we propose that the classical part of the plastic potential may be dependent on both the plastic slip vector and its gradient; for single crystals, this also makes it easier to deal with the "higher-order" boundary conditions. We develop both the kinematic formulation and its static dual and apply the theory to the simple shear of a constrained strip (example already exploited in Shu et al. [2001. J. Mech. Phys. Solids 49, 1361-1395], Bittencourt et al. [2003. J. Mech. Phys. Solids 51, 281-310], Niordson and Hutchinson [2003. Euro J. Mech. Phys. Solids 22, 771-778], Evers et al. [2004. J. Mech. Phys. Solids 52, 2379-2401], and Anand et al. [2005. J. Mech. Phys. Solids 53, 1789-1826]) to investigate what sort of behaviour the new model predicts. The availability of the total potential energy functional and its static dual allows us to easily solve this simple boundary value problem by resorting to the Ritz method.
NASA Astrophysics Data System (ADS)
Liao, Fei; Ye, Zhengyin
2015-12-01
Despite significant progress in recent computational techniques, the accurate numerical simulations, such as direct-numerical simulation and large-eddy simulation, are still challenging. For accurate calculations, the high-order finite difference method (FDM) is usually adopted with coordinate transformation from body-fitted grid to Cartesian grid. But this transformation might lead to failure in freestream preservation with the geometric conservation law (GCL) violated, particularly in high-order computations. GCL identities, including surface conservation law (SCL) and volume conservation law (VCL), are very important in discretization of high-order FDM. To satisfy GCL, various efforts have been made. An early and successful approach was developed by Thomas and Lombard [6] who used the conservative form of metrics to cancel out metric terms to further satisfy SCL. Visbal and Gaitonde [7] adopted this conservative form of metrics for SCL identities and satisfied VCL identity through invoking VCL equation to acquire the derivative of Jacobian in computation on moving and deforming grids with central compact schemes derived by Lele [5]. Later, using the metric technique from Visbal and Gaitonde [7], Nonomura et al. [8] investigated the freestream and vortex preservation properties of high-order WENO and WCNS on stationary curvilinear grids. A conservative metric method (CMM) was further developed by Deng et al. [9] with stationary grids, and detailed discussion about the innermost difference operator of CMM was shown with proof and corresponding numerical test cases. Noticing that metrics of CMM is asymmetrical without coordinate-invariant property, Deng et al. proposed a symmetrical CMM (SCMM) [12] by using the symmetric forms of metrics derived by Vinokur and Yee [10] to further eliminate asymmetric metric errors with stationary grids considered only. The research from Abe et al. [11] presented new asymmetric and symmetric conservative forms of time metrics and
Advances in Geometric Acoustic Propagation Modeling Methods
NASA Astrophysics Data System (ADS)
Blom, P. S.; Arrowsmith, S.
2013-12-01
Geometric acoustics provides an efficient numerical method to model propagation effects. At leading order, one can identify ensonified regions and calculate celerities of the predicted arrivals. Beyond leading order, the solution of the transport equation provides a means to estimate the amplitude of individual acoustic phases. The auxiliary parameters introduced in solving the transport equation have been found to provide a means of identifying ray paths connecting source and receiver, or eigenrays, for non-planar propagation. A detailed explanation of the eigenray method will be presented as well as an application to predicting azimuth deviations for infrasonic data recorded during the Humming Roadrunner experiment of 2012.
NASA Astrophysics Data System (ADS)
Donič, T.; Hadzima, B.; Raab, G.
2017-05-01
Equal Channel Angular Rolling (ECAR), a severe plastic deformation process, is suitable for the shear deforming a long and thin sheet continuously. An interesting issue is that thickness of a sheet is not reduced during ECAR. Although the shear texture and fine grain structure are easily obtained by ECAR, yet the ECAR process’s difficulties in terms of technical control, such as surface defect, low ductility and low processing speed, still remain. The surface defects and processing speed are partially improved by applying a series deformation of rolling and ECAR. The article presents methodological and analytical procedures, adaptation of a conventional rolling mill Duo-system for processes of a SPD-representative which are represented by the method ECAR. They specify in detail the technical requirements whose new design solutions should be implemented. They present in detail the mechanical load drive shafts, as well as the calculation of compression forces with consideration of the friction forces. The geometric analyses of localisation positions of the outlet channel in terms of size and orientation of the dominant shear plane are also presented.
Brst-Invariant Deformations of Geometric Structures in Topological Field Theories
NASA Astrophysics Data System (ADS)
Bytsenko, A. A.; Chaichian, M.; Tureanu, A.; Williams, F. L.
2013-06-01
We study a Lie algebra of formal vector fields Wn with its application to the perturbative deformed holomorphic symplectic structure in the A-model, and a Calabi-Yau manifold with boundaries in the B-model. A relevant concept in the vertex operator algebra and the BRST cohomology is that of the elliptic genera (the one-loop string partition function). We show that the elliptic genera can be written in terms of spectral functions of the hyperbolic three-geometry (which inherits the cohomology structure of BRST-like operator). We show that equivalence classes of deformations are described by a Hochschild cohomology theory of the DG-algebra {A} = (A, Q), Q = \\bar {∂ } + ∂ deform, which is defined to be the cohomology of (-1)n Q + dHoch. Here, \\bar {∂ } is the initial nondeformed BRST operator while ∂deform is the deformed part whose algebra is a Lie algebra of linear vector fields gln. We discuss the identification of the harmonic structure (HT•(X);HΩ•(X)) of affine space X and the group {Ext}Xn({{O}}\\triangle, {{O}}\\triangle ) (the HKR isomorphism), and bulk-boundary deformation pairing.
Young Children's Understanding of Geometric Shapes: The Role of Geometric Models
ERIC Educational Resources Information Center
Elia, Iliada; Gagatsis, Athanasios; Kyriakides, Leonidas
2003-01-01
In this paper, we explore the role of polygonal shapes as geometrical models in teaching mathematics, so as to elicit and interpret children's geometric conceptions and understanding about shapes. Primary pupils were asked to draw a stairway of figures (triangles, squares and rectangles) each one bigger than the preceding one. Pupils use two…
Geometric Model of a Coronal Cavity
NASA Technical Reports Server (NTRS)
Kucera, Therese A.; Gibson, S. E.; Ratawicki, D.; Dove, J.; deToma, G.; Hao, J.; Hudson, H. S.; Marque, C.; McIntosh, P. S.; Reeves, K. K.;
2010-01-01
We observed a coronal cavity from August 8-18 2007 during a multi-instrument observing campaign organized under the auspices of the International Heliophysical Year (IHY). Here we present initial efforts to model the cavity with a geometrical streamer-cavity model. The model is based the white-light streamer mode] of Gibson et a]. (2003 ), which has been enhanced by the addition of a cavity and the capability to model EUV and X-ray emission. The cavity is modeled with an elliptical cross-section and Gaussian fall-off in length and width inside the streamer. Density and temperature can be varied in the streamer and cavity and constrained via comparison with data. Although this model is purely morphological, it allows for three-dimensional, multi-temperature analysis and characterization of the data, which can then provide constraints for future physical modeling. Initial comparisons to STEREO/EUVI images of the cavity and streamer show that the model can provide a good fit to the data. This work is part of the effort of the International Space Science Institute International Team on Prominence Cavities
Geometric Model of a Coronal Cavity
NASA Technical Reports Server (NTRS)
Kucera, Therese A.; Gibson, S. E.; Ratawicki, D.; Dove, J.; deToma, G.; Hao, J.; Hudson, H. S.; Marque, C.; McIntosh, P. S.; Reeves, K. K.; Schmidt, D. J.; Sterling, A. C.; Tripathi, D. K.; Williams, D. R.; Zhang, M.
2010-01-01
We observed a coronal cavity from August 8-18 2007 during a multi-instrument observing campaign organized under the auspices of the International Heliophysical Year (IHY). Here we present initial efforts to model the cavity with a geometrical streamer-cavity model. The model is based the white-light streamer mode] of Gibson et a]. (2003 ), which has been enhanced by the addition of a cavity and the capability to model EUV and X-ray emission. The cavity is modeled with an elliptical cross-section and Gaussian fall-off in length and width inside the streamer. Density and temperature can be varied in the streamer and cavity and constrained via comparison with data. Although this model is purely morphological, it allows for three-dimensional, multi-temperature analysis and characterization of the data, which can then provide constraints for future physical modeling. Initial comparisons to STEREO/EUVI images of the cavity and streamer show that the model can provide a good fit to the data. This work is part of the effort of the International Space Science Institute International Team on Prominence Cavities
Experimental study of the geometrical effects in the localization of deformation
NASA Astrophysics Data System (ADS)
Poirier, C.; Ammi, M.; Bideau, D.; Troadec, J. P.
1992-01-01
We have studied the localization of deformation in a 2D packing model. The samples consist of regular packings of equal parallel cylinders (drinking straws). The local stress-strain characteristics, at the contact between two straws, shows a softening part, responsible for the localization of the deformation. We have analyzed the roughness of localization band, i.e., the width W of the localized zone versus its length L. Our results demonstrate the self-affine character of the localized zone: We find a power law, W~Lζ with ζ=0.73+/-0.07, which is consistent with recent work on the ``weak'' disorder model.
NASA Astrophysics Data System (ADS)
Zhevlakov, A. P.; Zatsepina, M. E.; Kirillovskii, V. K.
2014-06-01
The principles of transformation of a Foucault shadowgram into a quantitative map of wave-front deformation based on creation of a system of isophotes are unveiled. The presented studies and their results prove that there is a high degree of correspondence between a Foucault shadowgram and the geometrical model of a shear interferogram with respect to displaying wave-front deformations.
Geometric investigations of a vorticity model equation
NASA Astrophysics Data System (ADS)
Bauer, Martin; Kolev, Boris; Preston, Stephen C.
2016-01-01
This article consists of a detailed geometric study of the one-dimensional vorticity model equation which is a particular case of the generalized Constantin-Lax-Majda equation. Wunsch showed that this equation is the Euler-Arnold equation on Diff (S1) when the latter is endowed with the right-invariant homogeneous H ˙ 1 / 2-metric. In this article we prove that the exponential map of this Riemannian metric is not Fredholm and that the sectional curvature is locally unbounded. Furthermore, we prove a Beale-Kato-Majda-type blow-up criterion, which we then use to demonstrate a link to our non-Fredholmness result. Finally, we extend a blow-up result of Castro-Córdoba to the periodic case and to a much wider class of initial conditions, using a new generalization of an inequality for Hilbert transforms due to Córdoba-Córdoba.
NASA Astrophysics Data System (ADS)
Wang, Chuntao; Ni, Jiangqun; Zhang, Dong
2013-12-01
Counteracting geometrical attacks remains one of the most challenging problems in robust watermarking. In this paper, we resist rotation, scaling, and translation (RST) by constructing a kind of deformable pyramid transform (DPT) that is shift-invariant, steerable, and scalable. The DPT is extended from a closed-form polar-separable steerable pyramid transform (SPT). The radial component of the SPT's basis filters is taken as the kernel of the scalable basis filters, and the angular component is used for the steerable basis filters. The shift-invariance is inherited from the SPT by retaining undecimated high-pass and band-pass subbands. Based on the designed DPT, we theoretically derive interpolation functions for steerability and scalability and synchronization mechanisms for translation, rotation, and scaling. By exploiting the preferable characteristics of DPT, we develop a new template-based robust image watermarking scheme that is resilient to RST. Translation invariance is achieved by taking the Fourier magnitude of the cover image as the DPT's input. The resilience to rotation and scaling is obtained using the synchronization mechanisms for rotation and scaling, for which an efficient template-matching algorithm has been devised. Extensive simulations show that the proposed scheme is highly robust to geometrical attacks, such as RST, cropping, and row/column line removal, as well as common signal processing attacks such as JPEG compression, additive white Gaussian noise, and median filtering.
Geometrically engineering the standard model: Locally unfolding three families out of E{sub 8}
Bourjaily, Jacob L.
2007-08-15
This paper extends and builds upon the results of [J. L. Bourjaily, arXiv:0704.0444.], in which we described how to use the tools of geometrical engineering to deform geometrically engineered grand unified models into ones with lower symmetry. This top-down unfolding has the advantage that the relative positions of singularities giving rise to the many 'low-energy' matter fields are related by only a few parameters which deform the geometry of the unified model. And because the relative positions of singularities are necessary to compute the superpotential, for example, this is a framework in which the arbitrariness of geometrically engineered models can be greatly reduced. In [J. L. Bourjaily, arXiv:0704.0444.], this picture was made concrete for the case of deforming the representations of an SU{sub 5} model into their standard model content. In this paper we continue that discussion to show how a geometrically engineered 16 of SO{sub 10} can be unfolded into the standard model, and how the three families of the standard model uniquely emerge from the unfolding of a single, isolated E{sub 8} singularity.
Geometric Exponents of Dilute Loop Models
NASA Astrophysics Data System (ADS)
Provencher, Guillaume; Saint-Aubin, Yvan; Pearce, Paul A.; Rasmussen, Jørgen
2012-04-01
The fractal dimensions of the hull, the external perimeter and of the red bonds are measured through Monte Carlo simulations for dilute minimal models, and compared with predictions from conformal field theory and SLE methods. The dilute models used are those first introduced by Nienhuis. Their loop fugacity is β=-2 \\cos(π/bar{kappa}) where the parameter bar{kappa} is linked to their description through conformal loop ensembles. It is also linked to conformal field theories through their central charges c(bar{kappa})=13-6(bar{kappa}+bar{kappa}^{-1}) and, for the minimal models of interest here, bar{kappa}=p/p' where p and p' are two coprime integers. The geometric exponents of the hull and external perimeter are studied for the pairs ( p, p')=(1,1),(2,3),(3,4),(4,5),(5,6),(5,7), and that of the red bonds for ( p, p')=(3,4). Monte Carlo upgrades are proposed for these models as well as several techniques to improve their speeds. The measured fractal dimensions are obtained by extrapolation on the lattice size H, V→∞. The extrapolating curves have large slopes; despite these, the measured dimensions coincide with theoretical predictions up to three or four digits. In some cases, the theoretical values lie slightly outside the confidence intervals; explanations of these small discrepancies are proposed.
Geometric Modeling of Inclusions as Ellipsoids
NASA Technical Reports Server (NTRS)
Bonacuse, Peter J.
2008-01-01
Nonmetallic inclusions in gas turbine disk alloys can have a significant detrimental impact on fatigue life. Because large inclusions that lead to anomalously low lives occur infrequently, probabilistic approaches can be utilized to avoid the excessively conservative assumption of lifing to a large inclusion in a high stress location. A prerequisite to modeling the impact of inclusions on the fatigue life distribution is a characterization of the inclusion occurrence rate and size distribution. To help facilitate this process, a geometric simulation of the inclusions was devised. To make the simulation problem tractable, the irregularly sized and shaped inclusions were modeled as arbitrarily oriented, three independent dimensioned, ellipsoids. Random orientation of the ellipsoid is accomplished through a series of three orthogonal rotations of axes. In this report, a set of mathematical models for the following parameters are described: the intercepted area of a randomly sectioned ellipsoid, the dimensions and orientation of the intercepted ellipse, the area of a randomly oriented sectioned ellipse, the depth and width of a randomly oriented sectioned ellipse, and the projected area of a randomly oriented ellipsoid. These parameters are necessary to determine an inclusion s potential to develop a propagating fatigue crack. Without these mathematical models, computationally expensive search algorithms would be required to compute these parameters.
Integrable Deformations of T -Dual σ Models
NASA Astrophysics Data System (ADS)
Borsato, Riccardo; Wulff, Linus
2016-12-01
We present a method to deform (generically non-Abelian) T duals of two-dimensional σ models, which preserves classical integrability. The deformed models are identified by a linear operator ω on the dualized subalgebra, which satisfies the 2-cocycle condition. We prove that the so-called homogeneous Yang-Baxter deformations are equivalent, via a field redefinition, to our deformed models when ω is invertible. We explain the details for deformations of T duals of principal chiral models, and present the corresponding generalization to the case of supercoset models.
NASA Astrophysics Data System (ADS)
Sahmani, S.; Bahrami, M.; Ansari, R.
2014-12-01
This investigation deals with the free vibration characteristics of circular higher-order shear deformable nanoplates around the postbuckling configuration incorporating surface effects. Using the Gurtin-Murdoch elasticity theory, a size-dependent higher-order shear deformable plate model is developed which takes account all surface effects including surface elasticity, surface stress and surface density. Geometrical nonlinearity is considered based on the von Karman type nonlinear strain-displacement relationships. Also, in order to satisfy the balance conditions between bulk and surfaces of nanoplate, it is assumed that the normal stress is distributed cubically through the thickness of nanoplate. Hamilton's principle is utilized to derive non-classical governing differential equations of motion and related boundary conditions. Afterwards, an efficient numerical methodology based on a generalized differential quadrature (GDQ) method is employed to solve numerically the problem so as to discretize the governing partial differential equations along various edge supports using Chebyshev-Gauss-Lobatto grid points and pseudo arc-length continuation technique. A comparison between the results of present non-classical model and those of the classical plate theory is conducted. It is demonstrated that in contrast to the prebuckling domain, for a specified value of axial load in the postbuckling domain, increasing the plate thickness leads to higher frequencies.
FISHER'S GEOMETRIC MODEL WITH A MOVING OPTIMUM
Matuszewski, Sebastian; Hermisson, Joachim; Kopp, Michael
2014-01-01
Fisher's geometric model has been widely used to study the effects of pleiotropy and organismic complexity on phenotypic adaptation. Here, we study a version of Fisher's model in which a population adapts to a gradually moving optimum. Key parameters are the rate of environmental change, the dimensionality of phenotype space, and the patterns of mutational and selectional correlations. We focus on the distribution of adaptive substitutions, that is, the multivariate distribution of the phenotypic effects of fixed beneficial mutations. Our main results are based on an “adaptive-walk approximation,” which is checked against individual-based simulations. We find that (1) the distribution of adaptive substitutions is strongly affected by the ecological dynamics and largely depends on a single composite parameter γ, which scales the rate of environmental change by the “adaptive potential” of the population; (2) the distribution of adaptive substitution reflects the shape of the fitness landscape if the environment changes slowly, whereas it mirrors the distribution of new mutations if the environment changes fast; (3) in contrast to classical models of adaptation assuming a constant optimum, with a moving optimum, more complex organisms evolve via larger adaptive steps. PMID:24898080
Deformable human body model development
Wray, W.O.; Aida, T.
1998-11-01
This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). A Deformable Human Body Model (DHBM) capable of simulating a wide variety of deformation interactions between man and his environment has been developed. The model was intended to have applications in automobile safety analysis, soldier survivability studies and assistive technology development for the disabled. To date, we have demonstrated the utility of the DHBM in automobile safety analysis and are currently engaged in discussions with the U.S. military involving two additional applications. More specifically, the DHBM has been incorporated into a Virtual Safety Lab (VSL) for automobile design under contract to General Motors Corporation. Furthermore, we have won $1.8M in funding from the U.S. Army Medical Research and Material Command for development of a noninvasive intracranial pressure measurement system. The proposed research makes use of the detailed head model that is a component of the DHBM; the project duration is three years. In addition, we have been contacted by the Air Force Armstrong Aerospace Medical Research Laboratory concerning possible use of the DHBM in analyzing the loads and injury potential to pilots upon ejection from military aircraft. Current discussions with Armstrong involve possible LANL participation in a comparison between DHBM and the Air Force Articulated Total Body (ATB) model that is the current military standard.
A population based statistical model for daily geometric variations in the thorax.
Szeto, Yenny Z; Witte, Marnix G; van Herk, Marcel; Sonke, Jan-Jakob
2017-04-01
To develop a population based statistical model of the systematic interfraction geometric variations between the planning CT and first treatment week of lung cancer patients for inclusion as uncertainty term in future probabilistic planning. Deformable image registrations between the planning CT and first week CBCTs of 235 lung cancer patients were used to generate deformation vector fields (DVFs) representing the geometric variations of lung cancer patients. Using a second deformable registration step, the average DVF per patient was mapped to an average patient CT. Subsequently, the dominant modes of systematic geometric variations were extracted using Principal Component Analysis (PCA). For evaluation a leave-one-out cross-validation was performed. The first three PCA components mainly described cranial-caudal, anterior-posterior, and left-right variations, respectively. Fifty and 112 components were needed to describe correspondingly 75% and 90% of the variance. An overall systematic variation of 3.6mm SD was observed and could be described with an accuracy of about 1.0mm with the PCA model. A PCA based model for systematic geometric variations in the thorax was developed, and its accuracy determined. Such a model can serve as a basis for probability based treatment planning in lung cancer patients. Copyright © 2017 Elsevier B.V. All rights reserved.
A geometric model of defensive peripersonal space.
Bufacchi, R J; Liang, M; Griffin, L D; Iannetti, G D
2016-01-01
Potentially harmful stimuli occurring within the defensive peripersonal space (DPPS), a protective area surrounding the body, elicit stronger defensive reactions. The spatial features of the DPPS are poorly defined and limited to descriptive estimates of its extent along a single dimension. Here we postulated a family of geometric models of the DPPS, to address two important questions with respect to its spatial features: What is its fine-grained topography? How does the nervous system represent the body area to be defended? As a measure of the DPPS, we used the strength of the defensive blink reflex elicited by electrical stimulation of the hand (hand-blink reflex, HBR), which is reliably modulated by the position of the stimulated hand in egocentric coordinates. We tested the goodness of fit of the postulated models to HBR data from six experiments in which we systematically explored the HBR modulation by hand position in both head-centered and body-centered coordinates. The best-fitting model indicated that 1) the nervous system's representation of the body area defended by the HBR can be approximated by a half-ellipsoid centered on the face and 2) the DPPS extending from this area has the shape of a bubble elongated along the vertical axis. Finally, the empirical observation that the HBR is modulated by hand position in head-centered coordinates indicates that the DPPS is anchored to the face. The modeling approach described in this article can be generalized to describe the spatial modulation of any defensive response. Copyright © 2016 the American Physiological Society.
NASA Astrophysics Data System (ADS)
Kovaleva, Elizaveta; Klötzli, Urs; Habler, Gerlinde
2016-10-01
We present novel microstructural analyses of zircon from a variety of strained rocks. For the first time, multiple plastically deformed zircon crystals were analyzed in a kinematic context of the respective host shear zones. Our aim was to derive how the orientation of zircon grains in a shear zone affects their deformation, based on careful in situ observations. For sampling, we selected zircon-bearing rocks that were deformed by simple shear. Samples covered a range of P-T conditions and lithologies, including various meta-igneous and meta-sedimentary gneisses. Microstructural analyses of zircon crystals in situ with scanning electron backscatter diffraction mapping show strong geometrical relationships between orientations of: (i) the long axes of plastically deformed zircon crystals, (ii) the crystallographic orientation of misorientation axes in plastically deformed zircon crystals and (iii) the foliation and lineation directions of the respective samples. We assume that zircon crystals did not experience post-deformation rigid body rotation, and thus the true geometric link can be observed. The relationships are the following: (a) plastically deformed zircon crystals usually have long axes parallel to the mylonitic foliation plane; (b) crystals with < c > axes oriented at an angle > 15° to the foliation plane are undeformed or fractured. Zircon crystals that have < c > axes aligned parallel or normal to the stretching lineation within the foliation plane develop misorientation and rotation axes parallel to the [001] crystallographic direction. Zircon grains with the < c > axis aligned at 30-60° to the lineation within the foliation plane often develop either two low Miller indices misorientation axes or one high Miller indices misorientation axis. Host phases have a significant influence on deformation mechanisms. In a relatively soft matrix, zircon is more likely to develop low Miller indices misorientation axes than in a relatively strong matrix. These
Yang-Mills equation for the nuclear geometrical collective model connexion
NASA Astrophysics Data System (ADS)
Sparks, N.; Rosensteel, G.
2017-01-01
The Bohr-Mottelson collective model of rotations and quadrupole vibrations is a foundational model in nuclear structure physics. A modern formulation using differential geometry of bundles builds on this legacy collective model to allow a deformation-dependent interaction between rotational and vortical degrees of freedom. The interaction is described by the bundle connexion. This article reports the Yang-Mills equation for the connexion. For a class of solutions to the Yang-Mills equation, the differential geometric collective model attains agreement between experiment and theory for the moments of inertia of deformed isotopes. More generally, the differential geometric framework applies to models of emergent phenomena in which two interacting sets of degrees of freedom must be unified.
Geometric modeling for computer aided design
NASA Technical Reports Server (NTRS)
Schwing, James L.; Olariu, Stephen
1995-01-01
The primary goal of this grant has been the design and implementation of software to be used in the conceptual design of aerospace vehicles particularly focused on the elements of geometric design, graphical user interfaces, and the interaction of the multitude of software typically used in this engineering environment. This has resulted in the development of several analysis packages and design studies. These include two major software systems currently used in the conceptual level design of aerospace vehicles. These tools are SMART, the Solid Modeling Aerospace Research Tool, and EASIE, the Environment for Software Integration and Execution. Additional software tools were designed and implemented to address the needs of the engineer working in the conceptual design environment. SMART provides conceptual designers with a rapid prototyping capability and several engineering analysis capabilities. In addition, SMART has a carefully engineered user interface that makes it easy to learn and use. Finally, a number of specialty characteristics have been built into SMART which allow it to be used efficiently as a front end geometry processor for other analysis packages. EASIE provides a set of interactive utilities that simplify the task of building and executing computer aided design systems consisting of diverse, stand-alone, analysis codes. Resulting in a streamlining of the exchange of data between programs reducing errors and improving the efficiency. EASIE provides both a methodology and a collection of software tools to ease the task of coordinating engineering design and analysis codes.
NASA Astrophysics Data System (ADS)
Ottosson, W.; Lykkegaard Andersen, J. A.; Borrisova, S.; Mellemgaard, A.; Behrens, C. F.
2014-03-01
Respiration and anatomical variation during radiotherapy (RT) of lung cancer yield dosimetric uncertainties of the delivered dose, possibly affecting the clinical outcome if not corrected for. Adaptive radiotherapy (ART), based on deformable image registration (DIR) and Deep-Inspiration-Breath-Hold (DIBH) gating can potentially improve the accuracy of RT. Purpose: The objective was to investigate the performance of contour propagation on repeated CT and Cone Beam CT (CBCT) images in DIBH compared to images acquired in free breathing (FB), using a recently released DIR software. Method: Three locally advanced non-small cell lung cancer patients were included, each with a planning-, midterm- and final CT (pCT, mCT, fCT) and 7 CBCTs acquired weekly and on the same day as the mCT and fCT. All imaging were performed in both FB and DIBH, using Varian RPM system for respiratory tracking. Delineations of anatomical structures were performed on each image set. The CT images were retrospective rigidly and deformable registered to all obtained images using the Varian Smart Adapt v. 11.0. The registered images were analysed for volume change and Dice Similarity Coefficient (DSC). Result: Geometrical similarities were found between propagated and manually delineated structures, with a slightly favour of FB imaging. Special notice should be taken to registrations where image artefacts or low tissue contrast are present. Conclusion: This study does not support the hypothesis that DIBH images perform better image registration than FB images. However DIR is a feasible tool for ART of lung cancer.
Geometric deviation modeling by kinematic matrix based on Lagrangian coordinate
NASA Astrophysics Data System (ADS)
Liu, Weidong; Hu, Yueming; Liu, Yu; Dai, Wanyi
2015-09-01
Typical representation of dimension and geometric accuracy is limited to the self-representation of dimension and geometric deviation based on geometry variation thinking, yet the interactivity affection of geometric variation and gesture variation of multi-rigid body is not included. In this paper, a kinematic matrix model based on Lagrangian coordinate is introduced, with the purpose of unified model for geometric variation and gesture variation and their interactive and integrated analysis. Kinematic model with joint, local base and movable base is built. The ideal feature of functional geometry is treated as the base body; the fitting feature of functional geometry is treated as the adjacent movable body; the local base of the kinematic model is fixed onto the ideal geometry, and the movable base of the kinematic model is fixed onto the fitting geometry. Furthermore, the geometric deviation is treated as relative location or rotation variation between the movable base and the local base, and it's expressed by the Lagrangian coordinate. Moreover, kinematic matrix based on Lagrangian coordinate for different types of geometry tolerance zones is constructed, and total freedom for each kinematic model is discussed. Finally, the Lagrangian coordinate library, kinematic matrix library for geometric deviation modeling is illustrated, and an example of block and piston fits is introduced. Dimension and geometric tolerances of the shaft and hole fitting feature are constructed by kinematic matrix and Lagrangian coordinate, and the results indicate that the proposed kinematic matrix is capable and robust in dimension and geometric tolerances modeling.
Geometrizing the Quantum - A Toy Model
Koch, Benjamin
2009-12-15
It is shown that the equations of relativistic Bohmian mechanics for multiple bosonic particles have a dual description in terms of a classical theory of conformally 'curved' space-time. This shows that it is possible to formulate quantum mechanics as a purely classical geometrical theory. The results are further generalized to interactions with an external electromagnetic field.
Geometric aspects of shear jamming induced by deformation of frictionless sphere packings
NASA Astrophysics Data System (ADS)
Vinutha, H. A.; Sastry, Srikanth
2016-09-01
It has recently been demonstrated that shear deformation of frictionless sphere packings leads to structures that will undergo jamming in the presence of friction, at densities well below the isotropic jamming point {φj}≈ 0.64 , and at high enough strains. Here, we show that the geometric features induced by strain are robust with respect to finite size effects, and include the feature of hyperuniformity, previously studied in the context of jamming, and more recently in driven systems. We study the approach to jamming as strain is increased, by evolving frictionless sheared configurations through frictional dynamics, and thereby identify a critical, or jamming, strain for each density, for a chosen value of the coefficient of friction. In the presence of friction above a certain strain value the sheared frictionless packings begin to develop finite stresses, which marks the onset of shear jamming. At a higher strain value, the shear stress reaches a saturation value after rising rapidly above the onset of shear jamming, which permits identification of the shear jamming transition. The onset of shear jamming and shear jamming are found to occur when the coordination number Z reaches values of Z = 3 and Z = 4 respectively. By considering percolation probabilities for the contact network, clusters of four coordinated and six coordinated spheres, we show that the percolation of four coordinated spheres corresponds to the onset of shear jamming behaviour, whereas the percolation of six coordinated spheres corresponds to shear jamming, for the chosen friction coefficients. At the onset of shear jamming, the force distribution begins to develop a peak at finite value and the force network is anisotropic and heterogeneous. And at the shear jamming transition, the force distribution has a well defined peak close to < f> and the force network is less anisotropic and homogeneous. We briefly discuss mechanical aspects of the jamming behaviour by
Modal Substructuring of Geometrically Nonlinear Finite-Element Models
Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.
2015-12-21
The efficiency of a modal substructuring method depends on the component modes used to reduce each subcomponent model. Methods such as Craig–Bampton have been used extensively to reduce linear finite-element models with thousands or even millions of degrees of freedom down orders of magnitude while maintaining acceptable accuracy. A novel reduction method is proposed here for geometrically nonlinear finite-element models using the fixed-interface and constraint modes of the linearized system to reduce each subcomponent model. The geometric nonlinearity requires an additional cubic and quadratic polynomial function in the modal equations, and the nonlinear stiffness coefficients are determined by applying a series of static loads and using the finite-element code to compute the response. The geometrically nonlinear, reduced modal equations for each subcomponent are then coupled by satisfying compatibility and force equilibrium. This modal substructuring approach is an extension of the Craig–Bampton method and is readily applied to geometrically nonlinear models built directly within commercial finite-element packages. The efficiency of this new approach is demonstrated on two example problems: one that couples two geometrically nonlinear beams at a shared rotational degree of freedom, and another that couples an axial spring element to the axial degree of freedom of a geometrically nonlinear beam. The nonlinear normal modes of the assembled models are compared with those of a truth model to assess the accuracy of the novel modal substructuring approach.
Modal Substructuring of Geometrically Nonlinear Finite-Element Models
Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.
2015-12-21
The efficiency of a modal substructuring method depends on the component modes used to reduce each subcomponent model. Methods such as Craig–Bampton have been used extensively to reduce linear finite-element models with thousands or even millions of degrees of freedom down orders of magnitude while maintaining acceptable accuracy. A novel reduction method is proposed here for geometrically nonlinear finite-element models using the fixed-interface and constraint modes of the linearized system to reduce each subcomponent model. The geometric nonlinearity requires an additional cubic and quadratic polynomial function in the modal equations, and the nonlinear stiffness coefficients are determined by applying amore » series of static loads and using the finite-element code to compute the response. The geometrically nonlinear, reduced modal equations for each subcomponent are then coupled by satisfying compatibility and force equilibrium. This modal substructuring approach is an extension of the Craig–Bampton method and is readily applied to geometrically nonlinear models built directly within commercial finite-element packages. The efficiency of this new approach is demonstrated on two example problems: one that couples two geometrically nonlinear beams at a shared rotational degree of freedom, and another that couples an axial spring element to the axial degree of freedom of a geometrically nonlinear beam. The nonlinear normal modes of the assembled models are compared with those of a truth model to assess the accuracy of the novel modal substructuring approach.« less
Integration of geometric modeling and advanced finite element preprocessing
NASA Technical Reports Server (NTRS)
Shephard, Mark S.; Finnigan, Peter M.
1987-01-01
The structure to a geometry based finite element preprocessing system is presented. The key features of the system are the use of geometric operators to support all geometric calculations required for analysis model generation, and the use of a hierarchic boundary based data structure for the major data sets within the system. The approach presented can support the finite element modeling procedures used today as well as the fully automated procedures under development.
Analytical volcano deformation source models
Lisowski, Michael; Dzurisin, Daniel
2007-01-01
Primary volcanic landforms are created by the ascent and eruption of magma. The ascending magma displaces and interacts with surrounding rock and fluids as it creates new pathways, flows through cracks or conduits, vesiculates, and accumulates in underground reservoirs. The formation of new pathways and pressure changes within existing conduits and reservoirs stress and deform the surrounding rock. Eruption products load the crust. The pattern and rate of surface deformation around volcanoes reflect the tectonic and volcanic processes transmitted to the surface through the mechanical properties of the crust.
Geometrical model for non-zero θ13
NASA Astrophysics Data System (ADS)
Chen, Jun-Mou; Wang, Bin; Li, Xue-Qian
2011-10-01
Based on Friedberg and Lee’s geometric picture by which the tribimaximal Pontecorvo-Maki-Nakawaga-Sakata leptonic mixing matrix is constructed, namely, corresponding mixing angles correspond to the geometric angles among the sides of a cube. We suggest that the three realistic mixing angles, which slightly deviate from the values determined for the cube, are due to a viable deformation from the perfectly cubic shape. Taking the best-fitted results of θ12 and θ23 as inputs, we determine the central value of sin22θ13 should be 0.0238, with a relatively large error tolerance; this value lies in the range of measurement precision of the Daya Bay experiment and is consistent with recent results from the T2K Collaboration.
Multiscale geometric modeling of macromolecules II: Lagrangian representation
Feng, Xin; Xia, Kelin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei
2013-01-01
Geometric modeling of biomolecules plays an essential role in the conceptualization of biolmolecular structure, function, dynamics and transport. Qualitatively, geometric modeling offers a basis for molecular visualization, which is crucial for the understanding of molecular structure and interactions. Quantitatively, geometric modeling bridges the gap between molecular information, such as that from X-ray, NMR and cryo-EM, and theoretical/mathematical models, such as molecular dynamics, the Poisson-Boltzmann equation and the Nernst-Planck equation. In this work, we present a family of variational multiscale geometric models for macromolecular systems. Our models are able to combine multiresolution geometric modeling with multiscale electrostatic modeling in a unified variational framework. We discuss a suite of techniques for molecular surface generation, molecular surface meshing, molecular volumetric meshing, and the estimation of Hadwiger’s functionals. Emphasis is given to the multiresolution representations of biomolecules and the associated multiscale electrostatic analyses as well as multiresolution curvature characterizations. The resulting fine resolution representations of a biomolecular system enable the detailed analysis of solvent-solute interaction, and ion channel dynamics, while our coarse resolution representations highlight the compatibility of protein-ligand bindings and possibility of protein-protein interactions. PMID:23813599
Application of XML to geometric modeling of MEMS
NASA Astrophysics Data System (ADS)
Lee, Jiunn-Horng; Wu, Hung-Chun; Lee, Wei-Te; Cheng, Chih-Wei
2002-04-01
The necessary information for geometric modeling of MEMS consists of a mask layout file and a process definition file. CIF and GDSII are commonly accepted formats for the mask layout file. However, there are no standard ways to express the process definition file. In this paper, we propose an XML (Extensible Markup Language) data model to describe the process definition file for geometric modeling of surface-micro-machined MEMS. This model has been incorporated in our CAD system. The results of implementation show that the XML approach not only facilitates the development of applications but also helps the exchange of information.
MOEMS Modeling Using the Geometrical Matrix Toolbox
NASA Technical Reports Server (NTRS)
Wilson, William C.; Atkinson, Gary M.
2005-01-01
New technologies such as MicroOptoElectro-Mechanical Systems (MOEMS) require new modeling tools. These tools must simultaneously model the optical, electrical, and mechanical domains and the interactions between these domains. To facilitate rapid prototyping of these new technologies an optical toolbox has been developed for modeling MOEMS devices. The toolbox models are constructed using MATLAB's dynamical simulator, Simulink. Modeling toolboxes will allow users to focus their efforts on system design and analysis as opposed to developing component models. This toolbox was developed to facilitate rapid modeling and design of a MOEMS based laser ultrasonic receiver system.
Geometric modeling of subcellular structures, organelles, and multiprotein complexes
Feng, Xin; Xia, Kelin; Tong, Yiying; Wei, Guo-Wei
2013-01-01
SUMMARY Recently, the structure, function, stability, and dynamics of subcellular structures, organelles, and multi-protein complexes have emerged as a leading interest in structural biology. Geometric modeling not only provides visualizations of shapes for large biomolecular complexes but also fills the gap between structural information and theoretical modeling, and enables the understanding of function, stability, and dynamics. This paper introduces a suite of computational tools for volumetric data processing, information extraction, surface mesh rendering, geometric measurement, and curvature estimation of biomolecular complexes. Particular emphasis is given to the modeling of cryo-electron microscopy data. Lagrangian-triangle meshes are employed for the surface presentation. On the basis of this representation, algorithms are developed for surface area and surface-enclosed volume calculation, and curvature estimation. Methods for volumetric meshing have also been presented. Because the technological development in computer science and mathematics has led to multiple choices at each stage of the geometric modeling, we discuss the rationales in the design and selection of various algorithms. Analytical models are designed to test the computational accuracy and convergence of proposed algorithms. Finally, we select a set of six cryo-electron microscopy data representing typical subcellular complexes to demonstrate the efficacy of the proposed algorithms in handling biomolecular surfaces and explore their capability of geometric characterization of binding targets. This paper offers a comprehensive protocol for the geometric modeling of subcellular structures, organelles, and multiprotein complexes. PMID:23212797
Geometric modeling of subcellular structures, organelles, and multiprotein complexes.
Feng, Xin; Xia, Kelin; Tong, Yiying; Wei, Guo-Wei
2012-12-01
Recently, the structure, function, stability, and dynamics of subcellular structures, organelles, and multiprotein complexes have emerged as a leading interest in structural biology. Geometric modeling not only provides visualizations of shapes for large biomolecular complexes but also fills the gap between structural information and theoretical modeling, and enables the understanding of function, stability, and dynamics. This paper introduces a suite of computational tools for volumetric data processing, information extraction, surface mesh rendering, geometric measurement, and curvature estimation of biomolecular complexes. Particular emphasis is given to the modeling of cryo-electron microscopy data. Lagrangian-triangle meshes are employed for the surface presentation. On the basis of this representation, algorithms are developed for surface area and surface-enclosed volume calculation, and curvature estimation. Methods for volumetric meshing have also been presented. Because the technological development in computer science and mathematics has led to multiple choices at each stage of the geometric modeling, we discuss the rationales in the design and selection of various algorithms. Analytical models are designed to test the computational accuracy and convergence of proposed algorithms. Finally, we select a set of six cryo-electron microscopy data representing typical subcellular complexes to demonstrate the efficacy of the proposed algorithms in handling biomolecular surfaces and explore their capability of geometric characterization of binding targets. This paper offers a comprehensive protocol for the geometric modeling of subcellular structures, organelles, and multiprotein complexes. Copyright © 2012 John Wiley & Sons, Ltd.
Geometric curvature and phase of the Rabi model
Mao, Lijun; Huai, Sainan; Guo, Liping; Zhang, Yunbo
2015-11-15
We study the geometric curvature and phase of the Rabi model. Under the rotating-wave approximation (RWA), we apply the gauge independent Berry curvature over a surface integral to calculate the Berry phase of the eigenstates for both single and two-qubit systems, which is found to be identical with the system of spin-1/2 particle in a magnetic field. We extend the idea to define a vacuum-induced geometric curvature when the system starts from an initial state with pure vacuum bosonic field. The induced geometric phase is related to the average photon number in a period which is possible to measure in the qubit–cavity system. We also calculate the geometric phase beyond the RWA and find an anomalous sudden change, which implies the breakdown of the adiabatic theorem and the Berry phases in an adiabatic cyclic evolution are ill-defined near the anti-crossing point in the spectrum.
Librescu, L.; Souza, M.A. Pontificia Univ. Catolica )
1993-06-01
The static post-buckling of simply-supported flat panels exposed to a stationary nonuniform temperature field and subjected to a system of subcritical in-plane compressive edge loads is investigated. The study is performed within a refined theory of composite laminated plates incorporating the effect of transverse shear and the geometric nonlinearities. The influence played by a number of effects, among them transverse shear deformation, initial geometric imperfections, the character of the in-plane boundary conditions and thickness ratio are studied and a series of conclusions are outlined. The influence played by the complete temperature field (i.e., the uniform through thickness and thickness-wise gradient) as compared to the one induced by only the uniform one, is discussed and the peculiarities of the resulting post-buckling behaviors are enlightened. 24 refs.
NASA Technical Reports Server (NTRS)
Librescu, L.; Souza, M. A.
1993-01-01
The static post-buckling of simply-supported flat panels exposed to a stationary nonuniform temperature field and subjected to a system of subcritical in-plane compressive edge loads is investigated. The study is performed within a refined theory of composite laminated plates incorporating the effect of transverse shear and the geometric nonlinearities. The influence played by a number of effects, among them transverse shear deformation, initial geometric imperfections, the character of the in-plane boundary conditions and thickness ratio are studied and a series of conclusions are outlined. The influence played by the complete temperature field (i.e., the uniform through thickness and thickness-wise gradient) as compared to the one induced by only the uniform one, is discussed and the peculiarities of the resulting post-buckling behaviors are enlightened.
Method to geometrically personalize a detailed finite-element model of the spine.
Lalonde, Nadine Michèle; Petit, Yvan; Aubin, Carl-Eric; Wagnac, Eric; Arnoux, Pierre-Jean
2013-07-01
To date, developing geometrically personalized and detailed solid finite-element models (FEMs) of the spine remains a challenge, notably due to multiple articulations and complex geometries. To answer this problem, a methodology based on a free-form deformation technique (kriging) was developed to deform a detailed reference finite-element mesh of the spine (including discs and ligaments) to the patient-specific geometry of 10- and 82-year-old asymptomatic spines. Different kriging configurations were tested: with or without smoothing, and control points on or surrounding the entire mesh. Based on the results, it is recommended to use surrounding control points and smoothing. The mean node to surface distance between the deformed and target geometries was 0.3±1.1 mm. Most elements met the mesh quality criteria (95%) after deformation, without interference at the articular facets. The method's novelty lies in the deformation of the entire spine at once, as opposed to deforming each vertebra separately, with surrounding control points and smoothing. This enables the transformation of reference vertebrae and soft tissues to obtain complete and personalized FEMs of the spine with minimal postprocessing to optimize the mesh.
Modeling geometrically complex faults over many earthquake cycles via neural network acceleration
NASA Astrophysics Data System (ADS)
Robinson DeVries, P.; Thompson, T. B.; Meade, B. J.
2016-12-01
Deformation throughout the earthquake cycle along geometrically complex fault systems contributes to, and may dominate, the deformation budget of evolving tectonic structures. One of the greatest challenges to understanding the effects of repeated earthquake cycle activity on large-scale tectonic structures is the computational cost of viscoelastic earthquake cycle models. These computationally intensive viscoelastic codes may need to be evaluated at thousands of times and locations, and as a result, studies tend to adopt a few fixed rheological structures and model geometries, and examine the predicted time-dependent deformation over short (<10 yr) time periods at a given depth after a large earthquake. Training a deep neural network to learn an efficient representation of viscoelastic solutions - at any time, location, and for a large range of rheological structures - allows these calculations to be done quickly, with dense spatial and temporal resolution. Preliminary tests suggest this method can accelerate viscoelastic calculations by a factor of 500, and perhaps orders of magnitude more. We demonstrate how this machine learning approach enables the modeling of geometrically complex faults over thousands of earthquake cycles with high spatial and temporal resolution.
Normal Type-2 Fuzzy Geometric Curve Modeling: A Literature Review
NASA Astrophysics Data System (ADS)
Adesah, R. S.; Zakaria, R.
2017-09-01
Type-2 Fuzzy Set Theory (T2FST) is widely used for defining uncertainty data points rather than the traditional fuzzy set theory (type-1) since 2001. Recently, T2FST is used in many fields due to its ability to handle complex uncertainty data. In this paper, a review of normal type-2 fuzzy geometric curve modeling methods and techniques is presented. In particular, there have been recent applications of Normal Type-2 Fuzzy Set Theory (NT2FST) in geometric modeling, where it has helped improving results over type-1 fuzzy sets. In this paper, a concise and representative review of the processes in normal type-2 fuzzy geometrical curve modeling such as the fuzzification is presented.
3-D Geometric Modeling for the 21st Century.
ERIC Educational Resources Information Center
Ault, Holly K.
1999-01-01
Describes new geometric computer models used in contemporary computer-aided design (CAD) software including wire frame, surface, solid, and parametric models. Reviews their use in engineering design and discusses the impact of these new technologies on the engineering design graphics curriculum. (Author/CCM)
3-D Geometric Modeling for the 21st Century.
ERIC Educational Resources Information Center
Ault, Holly K.
1999-01-01
Describes new geometric computer models used in contemporary computer-aided design (CAD) software including wire frame, surface, solid, and parametric models. Reviews their use in engineering design and discusses the impact of these new technologies on the engineering design graphics curriculum. (Author/CCM)
Geometric Modeling of Flashover Configurations in Metallized Polypropylene Film
2005-06-01
GEOMETRIC MODELING OF FLASHOVER CONFIGURATIONS IN METALLIZED POLYPROPYLENE FILM E. M. Halstead, A. D. Caulcrick, J. L. Zirnheld Energy...Picatinny Arsenal, NJ 07806 Abstract The phenomenon of surface flashover on Metallized Polypropylene Films (MPF) is a highly complex process...model and to better understand the physical mechanisms behind this class of surface flashover . When completed, these investigations will answer
Geometric model for softwood transverse thermal conductivity. Part I
Hong-mei Gu; Audrey Zink-Sharp
2005-01-01
Thermal conductivity is a very important parameter in determining heat transfer rate and is required for developing of drying models and in industrial operations such as adhesive cure rate. Geometric models for predicting softwood thermal conductivity in the radial and tangential directions were generated in this study based on obervation and measurements of wood...
Modeling collective cell migration in geometric confinement
NASA Astrophysics Data System (ADS)
Tarle, Victoria; Gauquelin, Estelle; Vedula, S. R. K.; D'Alessandro, Joseph; Lim, C. T.; Ladoux, Benoit; Gov, Nir S.
2017-06-01
Monolayer expansion has generated great interest as a model system to study collective cell migration. During such an expansion the culture front often develops ‘fingers’, which we have recently modeled using a proposed feedback between the curvature of the monolayer’s leading edge and the outward motility of the edge cells. We show that this model is able to explain the puzzling observed increase of collective cellular migration speed of a monolayer expanding into thin stripes, as well as describe the behavior within different confining geometries that were recently observed in experiments. These comparisons give support to the model and emphasize the role played by the edge cells and the edge shape during collective cell motion.
Modeling collective cell migration in geometric confinement.
Tarle, Victoria; Gauquelin, Estelle; Vedula, S R K; D'Alessandro, Joseph; Lim, C T; Ladoux, Benoit; Gov, Nir S
2017-05-03
Monolayer expansion has generated great interest as a model system to study collective cell migration. During such an expansion the culture front often develops 'fingers', which we have recently modeled using a proposed feedback between the curvature of the monolayer's leading edge and the outward motility of the edge cells. We show that this model is able to explain the puzzling observed increase of collective cellular migration speed of a monolayer expanding into thin stripes, as well as describe the behavior within different confining geometries that were recently observed in experiments. These comparisons give support to the model and emphasize the role played by the edge cells and the edge shape during collective cell motion.
Geometric and electrostatic modeling using molecular rigidity functions
Mu, Lin; Xia, Kelin; Wei, Guowei
2017-03-01
Geometric and electrostatic modeling is an essential component in computational biophysics and molecular biology. Commonly used geometric representations admit geometric singularities such as cusps, tips and self-intersecting facets that lead to computational instabilities in the molecular modeling. Our present work explores the use of flexibility and rigidity index (FRI), which has a proved superiority in protein B-factor prediction, for biomolecular geometric representation and associated electrostatic analysis. FRI rigidity surfaces are free of geometric singularities. We propose a rigidity based Poisson–Boltzmann equation for biomolecular electrostatic analysis. These approaches to surface and electrostatic modeling are validated by a set of 21 proteins.more » Our results are compared with those of established methods. Finally, being smooth and analytically differentiable, FRI rigidity functions offer excellent curvature analysis, which characterizes concave and convex regions on protein surfaces. Polarized curvatures constructed by using the product of minimum curvature and electrostatic potential is shown to predict potential protein–ligand binding sites.« less
Geometric and electrostatic modeling using molecular rigidity functions
Mu, Lin; Xia, Kelin; Wei, Guowei
2017-03-01
Geometric and electrostatic modeling is an essential component in computational biophysics and molecular biology. Commonly used geometric representations admit geometric singularities such as cusps, tips and self-intersecting facets that lead to computational instabilities in the molecular modeling. Our present work explores the use of flexibility and rigidity index (FRI), which has a proved superiority in protein B-factor prediction, for biomolecular geometric representation and associated electrostatic analysis. FRI rigidity surfaces are free of geometric singularities. We propose a rigidity based Poisson–Boltzmann equation for biomolecular electrostatic analysis. These approaches to surface and electrostatic modeling are validated by a set of 21 proteins.more » Our results are compared with those of established methods. Finally, being smooth and analytically differentiable, FRI rigidity functions offer excellent curvature analysis, which characterizes concave and convex regions on protein surfaces. Polarized curvatures constructed by using the product of minimum curvature and electrostatic potential is shown to predict potential protein–ligand binding sites.« less
Decoherence of spin-deformed bosonic model
Dehdashti, Sh.; Mahdifar, A.; Bagheri Harouni, M.; Roknizadeh, R.
2013-07-15
The decoherence rate and some parameters affecting it are investigated for the generalized spin-boson model. We consider the spin-bosonic model when the bosonic environment is modeled by the deformed harmonic oscillators. We show that the state of the environment approaches a non-linear coherent state. Then, we obtain the decoherence rate of a two-level system which is in contact with a deformed bosonic environment which is either in thermal equilibrium or in the ground state. By using some recent realization of f-deformed oscillators, we show that some physical parameters strongly affect the decoherence rate of a two-level system. -- Highlights: •Decoherence of the generalized spin-boson model is considered. •In this model the environment consists of f-oscillators. •Via the interaction, the state of the environment approaches non-linear coherent states. •Effective parameters on decoherence are considered.
Chewing simulation with a physically accurate deformable model.
Pascale, Andra Maria; Ruge, Sebastian; Hauth, Steffen; Kordaß, Bernd; Linsen, Lars
2015-01-01
Nowadays, CAD/CAM software is being used to compute the optimal shape and position of a new tooth model meant for a patient. With this possible future application in mind, we present in this article an independent and stand-alone interactive application that simulates the human chewing process and the deformation it produces in the food substrate. Chewing motion sensors are used to produce an accurate representation of the jaw movement. The substrate is represented by a deformable elastic model based on the finite linear elements method, which preserves physical accuracy. Collision detection based on spatial partitioning is used to calculate the forces that are acting on the deformable model. Based on the calculated information, geometry elements are added to the scene to enhance the information available for the user. The goal of the simulation is to present a complete scene to the dentist, highlighting the points where the teeth came into contact with the substrate and giving information about how much force acted at these points, which therefore makes it possible to indicate whether the tooth is being used incorrectly in the mastication process. Real-time interactivity is desired and achieved within limits, depending on the complexity of the employed geometric models. The presented simulation is a first step towards the overall project goal of interactively optimizing tooth position and shape under the investigation of a virtual chewing process using real patient data (Fig 1).
Icosahedral quasicrystal decoration models. I. Geometrical principles
Mihalkovic, M. |; Zhu, W.; Henley, C.L.; Oxborrow, M. |
1996-04-01
It is proposed that quasicrystal structure determination should include the calculation of cohesive energies using realistic potentials. A class of atomic decoration models for {ital i}-AlMn is then presented, adopting the {open_quote}{open_quote}canonical-cell{close_quote}{close_quote} tiling geometry, with {open_quote}{open_quote}Mackay icosahedron{close_quote}{close_quote} clusters placed on all its nodes. The remaining atomic positions are based, as far as possible, on the known structure of {alpha}-AlMnSi. These models guarantee good local packing of the atoms, whose displacements away from {open_quote}{open_quote}ideal{close_quote}{close_quote} positions are specified by only a moderate number of parameters. Certain atomic sites are uncertain as regards their occupancy and/or chemistry; variations of the decoration rules on these sites must be compared, in order to discover the correct one. Our models are well adapted to be relaxed under an effective Hamiltonian to optimize the cohesive energy; we show how the energies found in such relaxations can be used to extract an effective tile-tile Hamiltonian, as would be needed for future studies of phason elasticity and the development of long-range order. In addition, we clarify concepts needed for decoration models in general (in particular, the ways in which elaborate, more realistic decorations may be evolved from simpler ones). We also show that these decoration models are closely related, but not identical, to quasiperiodic structures defined using six-dimensional formalism. {copyright} {ital 1996 The American Physical Society.}
A Robust Geometric Model for Argument Classification
NASA Astrophysics Data System (ADS)
Giannone, Cristina; Croce, Danilo; Basili, Roberto; de Cao, Diego
Argument classification is the task of assigning semantic roles to syntactic structures in natural language sentences. Supervised learning techniques for frame semantics have been recently shown to benefit from rich sets of syntactic features. However argument classification is also highly dependent on the semantics of the involved lexicals. Empirical studies have shown that domain dependence of lexical information causes large performance drops in outside domain tests. In this paper a distributional approach is proposed to improve the robustness of the learning model against out-of-domain lexical phenomena.
Geometric modeling for computer aided design
NASA Technical Reports Server (NTRS)
Schwing, James L.
1992-01-01
The goal was the design and implementation of software to be used in the conceptual design of aerospace vehicles. Several packages and design studies were completed, including two software tools currently used in the conceptual level design of aerospace vehicles. These tools are the Solid Modeling Aerospace Research Tool (SMART) and the Environment for Software Integration and Execution (EASIE). SMART provides conceptual designers with a rapid prototyping capability and additionally provides initial mass property analysis. EASIE provides a set of interactive utilities that simplify the task of building and executing computer aided design systems consisting of diverse, stand alone analysis codes that result in the streamlining of the exchange of data between programs, reducing errors and improving efficiency.
Multiscale geometric modeling of macromolecules I: Cartesian representation
Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo Wei
2013-01-01
This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the
Multiscale geometric modeling of macromolecules I: Cartesian representation.
Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo Wei
2014-01-01
This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the
Multiscale geometric modeling of macromolecules I: Cartesian representation
NASA Astrophysics Data System (ADS)
Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei
2014-01-01
This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the
Multiscale geometric modeling of macromolecules I: Cartesian representation
Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei
2014-01-15
This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace–Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the
Modelling deformation and fracture in confectionery wafers
NASA Astrophysics Data System (ADS)
Mohammed, Idris K.; Charalambides, Maria N.; Williams, J. Gordon; Rasburn, John
2015-01-01
The aim of this research is to model the deformation and fracture behaviour of brittle wafers often used in chocolate confectionary products. Three point bending and compression experiments were performed on beam and circular disc samples respectively to determine the 'apparent' stress-strain curves in bending and compression. The deformation of the wafer for both these testing types was observed in-situ within an SEM. The wafer is modeled analytically and numerically as a composite material with a core which is more porous than the skins. X-ray tomography was used to generate a three dimensional volume of the wafer microstructure which was then meshed and used for quantitative analysis. A linear elastic material model, with a damage function and element deletion, was used and the XMT generated architecture was loaded in compression. The output from the FE simulations correlates closely to the load-deflection deformation observed experimentally.
Modelling deformation and fracture in confectionery wafers
Mohammed, Idris K.; Charalambides, Maria N.; Williams, J. Gordon; Rasburn, John
2015-01-22
The aim of this research is to model the deformation and fracture behaviour of brittle wafers often used in chocolate confectionary products. Three point bending and compression experiments were performed on beam and circular disc samples respectively to determine the 'apparent' stress-strain curves in bending and compression. The deformation of the wafer for both these testing types was observed in-situ within an SEM. The wafer is modeled analytically and numerically as a composite material with a core which is more porous than the skins. X-ray tomography was used to generate a three dimensional volume of the wafer microstructure which was then meshed and used for quantitative analysis. A linear elastic material model, with a damage function and element deletion, was used and the XMT generated architecture was loaded in compression. The output from the FE simulations correlates closely to the load-deflection deformation observed experimentally.
A model for geometric and mechanical adaptation of arteries to sustained hypertension.
Rachev, A; Stergiopulos, N; Meister, J J
1998-02-01
This study aimed to model phenomenologically the dynamics of arterial wall remodeling under hypertensive conditions. Sustained hypertension was simulated by a step increase in blood pressure. The arterial wall was considered to be a thick-walled tube made of nonlinear elastic incompressible material. Remodeling rate equations were postulated for the evolution of the geometric dimensions of the hypertensive artery at the zero-stress state, as well as for one of the material constants in the constitutive equations. The driving stimuli for the geometric adaptation are the normalized deviations of wall stresses from their values under normotensive conditions. The geometric dimensions are modulated by the evolution of the deformed inner radius, which serves to restore the level of the flow-induced shear stresses at the arterial endothelium. Mechanical adaptation is driven by the difference between the area compliance under hypertensive and normotensive conditions. The predicted time course of the geometry and mechanical properties of arterial wall are in good qualitative agreement with published experimental findings. The model predicts that the geometric adaptation maintains the stress distribution in arterial wall to its control level, while the mechanical adaptation restores the normal arterial function under induced hypertension.
Three dimensional geometric modeling of processing-tomatoes
USDA-ARS?s Scientific Manuscript database
Characterizing tomato geometries with different shapes and sizes would facilitate the design of tomato processing equipments and promote computer-based engineering simulations. This research sought to develop a three-dimensional geometric model that can describe the morphological attributes of proce...
Geometric Aspects of Force Controllability for a Swimming Model
Khapalov, A. Y.
2008-02-15
We study controllability properties (swimming capabilities) of a mathematical model of an abstract object which 'swims' in the 2-D Stokes fluid. Our goal is to investigate how the geometric shape of this object affects the forces acting upon it. Such problems are of interest in biology and engineering applications dealing with propulsion systems in fluids.
Exploration of a Geometric Model of Data Fusion.
ERIC Educational Resources Information Center
Ibraev, Ulukbek; Ng, Kwong Bor; Kantor, Paul B.
2002-01-01
Explores aspects of data fusion (DF) for information retrieval (IR) using a set of data from the Fifth International Conference on Text Retrieval (TREC5). Derives an equation for effective DF based on a geometric model and shows that the performance of a pair of IR schemes may be approximated by a quadratic polynomial. (Author/LRW)
Geometric modeling in the problem of ball bearing accuracy
NASA Astrophysics Data System (ADS)
Glukhov, V. I.; Pushkarev, V. V.; Khomchenko, V. G.
2017-06-01
The manufacturing quality of ball bearings is an urgent problem for machine-building industry. The aim of the research is to improve the geometric specifications accuracy of bearings based on evidence-based systematic approach and the method of adequate size, location and form deviations modeling of the rings and assembled ball bearings. The present work addressed the problem of bearing geometric specifications identification and the study of these specifications. The deviation from symmetric planar of rings and bearings assembly and mounting width are among these specifications. A systematic approach to geometric specifications values and ball bearings tolerances normalization in coordinate systems will improve the quality of bearings by optimizing and minimizing the number of specifications. The introduction of systematic approach to the international standards on rolling bearings is a guarantee of a significant increase in accuracy of bearings and the quality of products where they are applied.
Geometric model from microscopic theory for nuclear absorption
NASA Technical Reports Server (NTRS)
John, Sarah; Townsend, Lawrence W.; Wilson, John W.; Tripathi, Ram K.
1993-01-01
A parameter-free geometric model for nuclear absorption is derived herein from microscopic theory. The expression for the absorption cross section in the eikonal approximation, taken in integral form, is separated into a geometric contribution that is described by an energy-dependent effective radius and two surface terms that cancel in an asymptotic series expansion. For collisions of light nuclei, an expression for the effective radius is derived from harmonic oscillator nuclear density functions. A direct extension to heavy nuclei with Woods-Saxon densities is made by identifying the equivalent half-density radius for the harmonic oscillator functions. Coulomb corrections are incorporated, and a simplified geometric form of the Bradt-Peters type is obtained. Results spanning the energy range from 1 MeV/nucleon to 1 GeV/nucleon are presented. Good agreement with experimental results is obtained.
Comparison and Analysis of Geometric Correction Models of Spaceborne SAR
Jiang, Weihao; Yu, Anxi; Dong, Zhen; Wang, Qingsong
2016-01-01
Following the development of synthetic aperture radar (SAR), SAR images have become increasingly common. Many researchers have conducted large studies on geolocation models, but little work has been conducted on the available models for the geometric correction of SAR images of different terrain. To address the terrain issue, four different models were compared and are described in this paper: a rigorous range-doppler (RD) model, a rational polynomial coefficients (RPC) model, a revised polynomial (PM) model and an elevation derivation (EDM) model. The results of comparisons of the geolocation capabilities of the models show that a proper model for a SAR image of a specific terrain can be determined. A solution table was obtained to recommend a suitable model for users. Three TerraSAR-X images, two ALOS-PALSAR images and one Envisat-ASAR image were used for the experiment, including flat terrain and mountain terrain SAR images as well as two large area images. Geolocation accuracies of the models for different terrain SAR images were computed and analyzed. The comparisons of the models show that the RD model was accurate but was the least efficient; therefore, it is not the ideal model for real-time implementations. The RPC model is sufficiently accurate and efficient for the geometric correction of SAR images of flat terrain, whose precision is below 0.001 pixels. The EDM model is suitable for the geolocation of SAR images of mountainous terrain, and its precision can reach 0.007 pixels. Although the PM model does not produce results as precise as the other models, its efficiency is excellent and its potential should not be underestimated. With respect to the geometric correction of SAR images over large areas, the EDM model has higher accuracy under one pixel, whereas the RPC model consumes one third of the time of the EDM model. PMID:27347973
Comparison and Analysis of Geometric Correction Models of Spaceborne SAR.
Jiang, Weihao; Yu, Anxi; Dong, Zhen; Wang, Qingsong
2016-06-25
Following the development of synthetic aperture radar (SAR), SAR images have become increasingly common. Many researchers have conducted large studies on geolocation models, but little work has been conducted on the available models for the geometric correction of SAR images of different terrain. To address the terrain issue, four different models were compared and are described in this paper: a rigorous range-doppler (RD) model, a rational polynomial coefficients (RPC) model, a revised polynomial (PM) model and an elevation derivation (EDM) model. The results of comparisons of the geolocation capabilities of the models show that a proper model for a SAR image of a specific terrain can be determined. A solution table was obtained to recommend a suitable model for users. Three TerraSAR-X images, two ALOS-PALSAR images and one Envisat-ASAR image were used for the experiment, including flat terrain and mountain terrain SAR images as well as two large area images. Geolocation accuracies of the models for different terrain SAR images were computed and analyzed. The comparisons of the models show that the RD model was accurate but was the least efficient; therefore, it is not the ideal model for real-time implementations. The RPC model is sufficiently accurate and efficient for the geometric correction of SAR images of flat terrain, whose precision is below 0.001 pixels. The EDM model is suitable for the geolocation of SAR images of mountainous terrain, and its precision can reach 0.007 pixels. Although the PM model does not produce results as precise as the other models, its efficiency is excellent and its potential should not be underestimated. With respect to the geometric correction of SAR images over large areas, the EDM model has higher accuracy under one pixel, whereas the RPC model consumes one third of the time of the EDM model.
Parameterization of a Geometric Flow Implicit Solvation Model
Thomas, Dennis G.; Chun, Jaehun; Chen, Zhan; Wei, Guowei; Baker, Nathan A.
2012-01-01
Implicit solvent models are popular for their high computational efficiency and simplicity over explicit solvent models and are extensively used for computing molecular solvation properties. The accuracy of implicit solvent models depends on the geometric description of the solute-solvent interface and the solvent dielectric profile that is defined near the surface of the solute molecule. Typically, it is assumed that the dielectric profile is spatially homogeneous in the bulk solvent medium and varies sharply across the solute-solvent interface. However, the specific form of this profile is often described by ad hoc geometric models rather than physical solute-solvent interactions. Hence, it is of significant interest to improve the accuracy of these implicit solvent models by more realistically defining the solute-solvent boundary within a continuum setting. Recently, a differential geometry-based geometric flow solvation model was developed, in which the polar and nonpolar free energies are coupled through a characteristic function that describes a smooth dielectric interface profile across the solvent–solute boundary in a thermodynamically self-consistent fashion. The main parameters of the model are the solute/solvent dielectric coefficients, solvent pressure on the solute, microscopic surface tension, solvent density, and molecular force-field parameters. In this work, we investigate how changes in the pressure, surface tension, solute dielectric coefficient, and choice of different force-field charge and radii parameters affect the prediction accuracy for hydration free energies of 17 small organic molecules based on the geometric flow solvation model. The results of our study provide insights on the parameterization, accuracy, and predictive power of this new implicit solvent model. PMID:23212974
A Geometric Crescent Model for Black Hole Images
NASA Astrophysics Data System (ADS)
Kamruddin, Ayman Bin; Dexter, J.
2013-01-01
The Event Horizon Telescope (EHT), a global very long baseline interferometry array operating at millimeter wavelengths, is spatially resolving the immediate environment of black holes for the first time. The current observations of the Galactic center black hole, Sagittarius A* (Sgr A*), have been interpreted in terms of unmotivated geometric models (e.g., a symmetric Gaussian) or detailed calculations involving accretion onto a black hole. The latter are subject to large systematic uncertainties. Motivated by relativistic effects around black holes, we propose a geometric crescent model for black hole images. We show that this simple model provides an excellent statistical description of the existing EHT data of Sgr A*, superior to the Gaussian. It also closely matches physically predicted models, bridging accretion theory and observation. Based on our results, we make predictions for future observations for the accessibility of the black hole shadow, direct evidence for a black hole event horizon.
Mathematical modeling of deformation during hot rolling
Jin, D.; Stachowiak, R.G.; Samarasekera, I.V.; Brimacombe, J.K.
1994-12-31
The deformation that occurs in the roll bite during the hot rolling of steel, particularly the strain-rate and strain distribution, has been mathematically modeled using finite-element analysis. In this paper three different finite-element models are compared with one another and with industrial measurements. The first model is an Eulerian analysis based on the flow formulation method, while the second utilizes an Updated Lagrangian approach. The third model is based on a commercially available program DEFORM which also utilizes a Lagrangian reference frame. Model predictions of strain and strain-rate distribution, particularly near the surface of the slab, are strongly influenced by the treatment of friction at the boundary and the magnitude of the friction coefficient or shear factor. Roll forces predicted by the model have been compared with industrial rolling loads from a seven-stand hot-strip mill.
Shekhar, Raj; Lei, Peng; Castro-Pareja, Carlos R; Plishker, William L; D'Souza, Warren D
2007-07-01
Conventional radiotherapy is planned using free-breathing computed tomography (CT), ignoring the motion and deformation of the anatomy from respiration. New breath-hold-synchronized, gated, and four-dimensional (4D) CT acquisition strategies are enabling radiotherapy planning utilizing a set of CT scans belonging to different phases of the breathing cycle. Such 4D treatment planning relies on the availability of tumor and organ contours in all phases. The current practice of manual segmentation is impractical for 4D CT, because it is time consuming and tedious. A viable solution is registration-based segmentation, through which contours provided by an expert for a particular phase are propagated to all other phases while accounting for phase-to-phase motion and anatomical deformation. Deformable image registration is central to this task, and a free-form deformation-based nonrigid image registration algorithm will be presented. Compared with the original algorithm, this version uses novel, computationally simpler geometric constraints to preserve the topology of the dense control-point grid used to represent free-form deformation and prevent tissue fold-over. Using mean squared difference as an image similarity criterion, the inhale phase is registered to the exhale phase of lung CT scans of five patients and of characteristically low-contrast abdominal CT scans of four patients. In addition, using expert contours for the inhale phase, the corresponding contours were automatically generated for the exhale phase. The accuracy of the segmentation (and hence deformable image registration) was judged by comparing automatically segmented contours with expert contours traced directly in the exhale phase scan using three metrics: volume overlap index, root mean square distance, and Hausdorff distance. The accuracy of the segmentation (in terms of radial distance mismatch) was approximately 2 mm in the thorax and 3 mm in the abdomen, which compares favorably to the
Geometric Modelling of Tree Roots with Different Levels of Detail
NASA Astrophysics Data System (ADS)
Guerrero Iñiguez, J. I.
2017-09-01
This paper presents a geometric approach for modelling tree roots with different Levels of Detail, suitable for analysis of the tree anchoring, potentially occupied underground space, interaction with urban elements and damage produced and taken in the built-in environment. Three types of tree roots are considered to cover several species: tap root, heart shaped root and lateral roots. Shrubs and smaller plants are not considered, however, a similar approach can be considered if the information is available for individual species. The geometrical approach considers the difficulties of modelling the actual roots, which are dynamic and almost opaque to direct observation, proposing generalized versions. For each type of root, different geometric models are considered to capture the overall shape of the root, a simplified block model, and a planar or surface projected version. Lower detail versions are considered as compatibility version for 2D systems while higher detail models are suitable for 3D analysis and visualization. The proposed levels of detail are matched with CityGML Levels of Detail, enabling both analysis and aesthetic views for urban modelling.
Geometric-optical Modeling of a Conifer Forest Canopy
NASA Technical Reports Server (NTRS)
Strahler, A. H. (Principal Investigator)
1985-01-01
The objective of this research is to explore how the geometry of trees in forest stands influences the reflectance of the forest as imaged from space. Most plant canopy modeling has viewed the canopy as an assemblage of plane-parallel layers on top of a soil surface. For these models, leaf angle distribution, leaf area index, and the angular transmittance and reflectance of leaves are the primary optical and geometric parameters. Such models are now sufficiently well developed to explain most of the variance in angular reflectance measurements observed from homogeneous plant canopies. However, forest canopies as imaged by airborne and spaceborne scanners exhibit considerable variance at quite a different scale. Brightness values vary strongly from one pixel to the next primarily as a function of the number of trees they contain. At this scale, the forest canopy is nonuniform and discontinuous. This research focuses on a discrete-element, geometric-optical view of the forest canopy.
Geometric comparison of popular mixture-model distances.
Mitchell, Scott A.
2010-09-01
Statistical Latent Dirichlet Analysis produces mixture model data that are geometrically equivalent to points lying on a regular simplex in moderate to high dimensions. Numerous other statistical models and techniques also produce data in this geometric category, even though the meaning of the axes and coordinate values differs significantly. A distance function is used to further analyze these points, for example to cluster them. Several different distance functions are popular amongst statisticians; which distance function is chosen is usually driven by the historical preference of the application domain, information-theoretic considerations, or by the desirability of the clustering results. Relatively little consideration is usually given to how distance functions geometrically transform data, or the distances algebraic properties. Here we take a look at these issues, in the hope of providing complementary insight and inspiring further geometric thought. Several popular distances, {chi}{sup 2}, Jensen - Shannon divergence, and the square of the Hellinger distance, are shown to be nearly equivalent; in terms of functional forms after transformations, factorizations, and series expansions; and in terms of the shape and proximity of constant-value contours. This is somewhat surprising given that their original functional forms look quite different. Cosine similarity is the square of the Euclidean distance, and a similar geometric relationship is shown with Hellinger and another cosine. We suggest a geodesic variation of Hellinger. The square-root projection that arises in Hellinger distance is briefly compared to standard normalization for Euclidean distance. We include detailed derivations of some ratio and difference bounds for illustrative purposes. We provide some constructions that nearly achieve the worst-case ratios, relevant for contours.
A geometric crescent model for black hole images
NASA Astrophysics Data System (ADS)
Kamruddin, Ayman Bin; Dexter, Jason
2013-09-01
The Event Horizon Telescope (EHT), a global very long baseline interferometry array operating at millimetre wavelengths, is spatially resolving the immediate environments of black holes for the first time. The current observations of the Galactic centre black hole, Sagittarius A* (Sgr A*), and M87 have been interpreted in terms of either geometric models (e.g. a symmetric Gaussian) or detailed calculations of the appearance of black hole accretion flows. The former are not physically motivated, while the latter are subject to large systematic uncertainties. Motivated by the dominant relativistic effects of Doppler beaming and gravitational lensing in many calculations, we propose a geometric crescent model for black hole images. We show that this simple model provides an excellent statistical description of the existing EHT data of Sgr A* and M87, superior to other geometric models for Sgr A*. It also qualitatively matches physically predicted models, bridging accretion theory and observation. Based on our results, we make predictions for the detectability of the black hole shadow, a signature of strong gravity, in future observations.
Workshop on the Integration of Finite Element Modeling with Geometric Modeling
NASA Technical Reports Server (NTRS)
Wozny, Michael J.
1987-01-01
The workshop on the Integration of Finite Element Modeling with Geometric Modeling was held on 12 May 1987. It was held to discuss the geometric modeling requirements of the finite element modeling process and to better understand the technical aspects of the integration of these two areas. The 11 papers are presented except for one for which only the abstract is given.
Measurement of ship deformation based on ARX model
NASA Astrophysics Data System (ADS)
Ma, Xianglu; Qin, Shiqiao; Wang, Xingshu; Hu, Feng; Wu, Wei; Zheng, JiaXing
2016-01-01
Ship deformation is the main error source of partial reference. Such deformation can be estimated by laser gyro units and Kalman filter technology. For Kalman filter, deformation was divide into two parts, dynamic deformation, and static deformation. Traditionally, dynamic deformation is treated as AR2 model .In this paper, dynamic deformation is taken as a kind of ARX model. Based on actual data measured by Yuanwang-3 Space Survey Ship, simulation experiments are studied. Results show that the novel model can improve the measurement precision.
Geometric-optical modeling of a conifer forest canopy
NASA Technical Reports Server (NTRS)
Li, X.; Strahler, A. H.
1985-01-01
A geometric-optical model of a conifer forest canopy was constructed to describe the variance of a remotely-sensed image of a forest stand. The model is driven by interpixel variance generated from three sources: (1) the number of crowns in the pixel; (2) the size of the individual crowns; and (3) the overlapping of crowns and shadows. The illumination of a tree and its shadow is described as a cone using parallel-ray geometry. The model can also be inverted to provide estimates of the size, shape and spacing of the trees using remotely-sensed imagery and a minimum of ground measurements. The results of field tests using 10-meter and 80-meter multispectral imagery of two test conifer stands in northeastern California are presented. It is shown that the model produces reasonable estimates for the geometric parameters of the stand and appears to be sufficiently robust for application to other geometric shapes corresponding to different types of vegetation.
Cosmic constraint to DGP brane model: Geometrical and dynamical perspectives
Xu Lixin; Wang Yuting
2010-08-15
In this paper, the Dvali-Gabadadze-Porrati (DGP) brane model is confronted by current cosmic observational data sets from geometrical and dynamical perspectives. On the geometrical side, the recently released Union2 557 of type Ia supernovae (SN Ia), the baryon acoustic oscillation from the Sloan Digital Sky Survey and the Two Degree Galaxy Redshift Survey (transverse and radial to line-of-sight data points), the cosmic microwave background measurement given by the seven-year Wilkinson Microwave Anisotropy Probe observations [shift parameters R, l{sub a}(z{sub *}) and redshift at the last scatter surface z{sub *}], ages of high redshifts galaxies, i.e., the lookback time and the high redshift gamma ray bursts are used. On the dynamical side, data points about the growth function of matter linear perturbations are used. Using the same data set combination, we also constrain the flat {Lambda}CDM model as a comparison. The results show that current geometrical and dynamical observational data sets much favor the flat {Lambda}CDM model and the departure from it is above 4{sigma}(6{sigma}) for the spatially flat DGP model with (without) SN systematic errors. The consistence of growth function data points is checked in terms of a relative departure of redshift-distance relation.
Liquid Ropes: A Geometrical Model for Thin Viscous Jet Instabilities
NASA Astrophysics Data System (ADS)
Brun, P.-T.; Audoly, Basile; Ribe, Neil M.; Eaves, T. S.; Lister, John R.
2015-05-01
Thin, viscous fluid threads falling onto a moving belt behave in a way reminiscent of a sewing machine, generating a rich variety of periodic stitchlike patterns including meanders, W patterns, alternating loops, and translated coiling. These patterns form to accommodate the difference between the belt speed and the terminal velocity at which the falling thread strikes the belt. Using direct numerical simulations, we show that inertia is not required to produce the aforementioned patterns. We introduce a quasistatic geometrical model which captures the patterns, consisting of three coupled ordinary differential equations for the radial deflection, the orientation, and the curvature of the path of the thread's contact point with the belt. The geometrical model reproduces well the observed patterns and the order in which they appear as a function of the belt speed.
Liquid ropes: a geometrical model for thin viscous jet instabilities.
Brun, P-T; Audoly, Basile; Ribe, Neil M; Eaves, T S; Lister, John R
2015-05-01
Thin, viscous fluid threads falling onto a moving belt behave in a way reminiscent of a sewing machine, generating a rich variety of periodic stitchlike patterns including meanders, W patterns, alternating loops, and translated coiling. These patterns form to accommodate the difference between the belt speed and the terminal velocity at which the falling thread strikes the belt. Using direct numerical simulations, we show that inertia is not required to produce the aforementioned patterns. We introduce a quasistatic geometrical model which captures the patterns, consisting of three coupled ordinary differential equations for the radial deflection, the orientation, and the curvature of the path of the thread's contact point with the belt. The geometrical model reproduces well the observed patterns and the order in which they appear as a function of the belt speed.
Single High Fidelity Geometric Data Sets for LCM - Model Requirements
2006-11-01
Defence R&D Canada – Atlantic DEFENCE DÉFENSE & Single High Fidelity Geometric Data Sets for LCM – Model Requirements D. Brennan T. Koko K. Mackay M...Brennan T. Koko K. Mackay M. Norwood S. Tobin E. Teng J. Wallace Martec Limited Martec Limited 1888 Brunswick Street, Suite 400 Halifax...result in SPMs for use in LCM analysis of existing and future classes of Canadian naval vessels. D. Brennan, T. Koko , K. Mackay, M. Norwood, S. Tobin, E
Visser, Richard; Ruff, Clifford F; Angullia, Freida; Ponniah, Allan J T; Jeelani, N U Owase; Britto, Jonathan A; Koudstaal, Maarten J; Dunaway, David J
2017-02-01
Crouzon-Pfeiffer syndrome is caused by mutations predominantly in the FGFR2 gene leading to syndromic craniosynostosis and midfacial hypoplasia. Monobloc distraction aims to correct both functional and aesthetic disharmony as a result of midfacial hypoplasia. This study evaluates the corrective effects and effectiveness of monobloc distraction in Crouzon-Pfeiffer patients. Preoperative and postoperative scans were collected from 20 Crouzon and two Pfeiffer patients aged 7 to 20 years. Fifty-six normal skulls were used as a control group. Geometric morphometrics using 52 frontofacial landmarks were used to analyze the normal skull and preoperative and postoperative patient skulls. Color maps were created to visualize differences among the average normal, preoperative, and postoperative Crouzon-Pfeiffer patients. In the studied patient population, monobloc distraction with the use of an external distractor advanced the upper half of the midface more than the lower half of the midface. There was an anteroinferior rotation in the monobloc segment. The zygomatic arch length improved on average to 88 and 90 percent of normal (right and left, respectively), whereas globe protrusion was corrected from 134 percent to 84 percent and from 131 percent to 87 percent of normal (right and left, respectively) in the studied patient population. Compared with a normal skull, the maxillary region remained retruded. The advancement achieved by monobloc distraction is effective in the upper half of the midface; the lower half of the midface is advanced but remains retruded in comparison with the normal population. The midface is rotated anteroinferiorly. Therapeutic, IV.
Unified Model Deformation and Flow Transition Measurements
NASA Technical Reports Server (NTRS)
Burner, Alpheus W.; Liu, Tianshu; Garg, Sanjay; Bell, James H.; Morgan, Daniel G.
1999-01-01
The number of optical techniques that may potentially be used during a given wind tunnel test is continually growing. These include parameter sensitive paints that are sensitive to temperature or pressure, several different types of off-body and on-body flow visualization techniques, optical angle-of-attack (AoA), optical measurement of model deformation, optical techniques for determining density or velocity, and spectroscopic techniques for determining various flow field parameters. Often in the past the various optical techniques were developed independently of each other, with little or no consideration for other techniques that might also be used during a given test. Recently two optical techniques have been increasingly requested for production measurements in NASA wind tunnels. These are the video photogrammetric (or videogrammetric) technique for measuring model deformation known as the video model deformation (VMD) technique, and the parameter sensitive paints for making global pressure and temperature measurements. Considerations for, and initial attempts at, simultaneous measurements with the pressure sensitive paint (PSP) and the videogrammetric techniques have been implemented. Temperature sensitive paint (TSP) has been found to be useful for boundary-layer transition detection since turbulent boundary layers convect heat at higher rates than laminar boundary layers of comparable thickness. Transition is marked by a characteristic surface temperature change wherever there is a difference between model and flow temperatures. Recently, additional capabilities have been implemented in the target-tracking videogrammetric measurement system. These capabilities have permitted practical simultaneous measurements using parameter sensitive paint and video model deformation measurements that led to the first successful unified test with TSP for transition detection in a large production wind tunnel.
Geometrical measurement of cardiac wavelength in reaction-diffusion models
NASA Astrophysics Data System (ADS)
Dupraz, Marie; Jacquemet, Vincent
2014-09-01
The dynamics of reentrant arrhythmias often consists in multiple wavelets propagating throughout an excitable medium. An arrhythmia can be sustained only if these reentrant waves have a sufficiently short wavelength defined as the distance traveled by the excitation wave during its refractory period. In a uniform medium, wavelength may be estimated as the product of propagation velocity and refractory period (electrophysiological wavelength). In order to accurately measure wavelength in more general substrates relevant to atrial arrhythmias (heterogeneous and anisotropic), we developed a mathematical framework to define geometrical wavelength at each time instant based on the length of streamlines following the propagation velocity field within refractory regions. Two computational methods were implemented: a Lagrangian approach in which a set of streamlines were integrated, and an Eulerian approach in which wavelength was the solution of a partial differential equation. These methods were compared in 1D/2D tissues and in a model of the left atrium. An advantage of geometrical definition of wavelength is that the wavelength of a wavelet can be tracked over time with high temporal resolution and smaller temporal variability in an anisotropic and heterogeneous medium. The results showed that the average electrophysiological wavelength was consistent with geometrical measurements of wavelength. Wavelets were however often shorter than the electrophysiological wavelength due to interactions with boundaries and other wavelets. These tools may help to assess more accurately the relation between substrate properties and wavelet dynamics in computer models.
Acoustoelasticity model of inhomogeneously deformed bodies
NASA Astrophysics Data System (ADS)
Kravchishin, O. Z.; Chekurin, V. F.
2009-10-01
We consider a mathematical model of dynamics of small elastic perturbations in an inhomogeneously deformed rigid body, where for the determining parameters of a local state we take the tensor characteristics of a given actual (strained) configuration (the Cauchy stress tensor and the Hencky or Almansi or Figner strain measure). An iteration algorithm is developed to solve the Cauchy problem stated in the framework of this model for a system of hyperbolic equations with variable coefficients that describes the propagation of elastic pulses in an inhomogeneous deformed continuum. In the case of two-dimensional stress fields, we obtain acoustoelasticity integral relations between the probing pulse parameters and the initial strain (stress) distribution in the direction of pulse propagation in the strained body. We also consider an example of application of the obtained integral relations in the inverse acoustic tomography problem for residual strains in a strip.
A Digital Video Model Deformation System
NASA Technical Reports Server (NTRS)
Burner, A. W.; Snow, W. L.; Goad, W. K.; Childers, B. A.
1986-01-01
The use of slid-state array cameras and a PC controlled image acquisition system to measure model deformation in a wind tunnel is discussed. This digital system is an improvement to an earlier video model deformation system used at the National Transonic Facility (NTF) which employed high-resolution tube cameras and required the manual measurement of targets on video hardcopy images. The new system eliminates both the vibration-induced distortion associated with tube cameras and the manual readup of video images necessary in the earlier version. Camera calibration and data reduction procedures necessary to convert pixel image plane data from two cameras into wing deflections are presented. Laboratory tests to establish the uncertainty of the new system with the geometry to be used at the NTF are described.
A digital video model deformation system
NASA Astrophysics Data System (ADS)
Burner, A. W.; Snow, W. L.; Goad, W. K.; Childers, B. A.
The use of solid-state array cameras and a PC-controlled image acquisition system to measure model deformation in a wind tunnel is discussed. This digital system improves an earlier video model deformation system that used high-resolution tube cameras and required the manual measurement of targets on video hardcopy images. The new system eliminates both the vibration-induced distortion associated with tube cameras and the manual readup of video images necessary in the earlier version. Camera calibration and data reduction procedures necessary to convert pixel image plane data from two cameras into wing deflections are presented. Laboratory tests to establish the uncertainty of the system with the geometry to be used are described.
Multiple representation approach to geometric model construction from range data
NASA Astrophysics Data System (ADS)
Koivunen, Visa; Vezien, Jean-Marc; Bajcsy, Ruzena
1995-04-01
A method is presented for constructing geometric design data from noisy 3-D sensor measurements of physical parts. In early processing phase, RLTS regression filters stemming from robust estimation theory are used for separating the desired part of the signal in contaminated sensor data from undesired part. Strategies for producing a complete 3-D data set from partial views are studied. Surface triangulation, NURBS, and superellipsoids are employed in model construction to be able to represent efficiently polygonal shapes, free form surfaces and standard primitive solids. Multiple representations are used because there is no single representation that would be most appropriate in all situations. The size of the required control point mesh for spline description is estimated using a surface characterization process. Surfaces of arbitrary topology are modeled using triangulation and trimmed NURBS. A user given tolerance value is driving refinement of the obtained surface model. The resulting model description is a procedural CAD model which can convey structural information in addition to low level geometric primitives. The model is translated to IGES standard product data exchange format to enable data sharing with other processes in concurrent engineering environment. Preliminary results on view registration and integration using simulated data are shown. Examples of model construction using both real and simulated data are also given.
Scale Problems in Geometric-Kinematic Modelling of Geological Objects
NASA Astrophysics Data System (ADS)
Siehl, Agemar; Thomsen, Andreas
To reveal, to render and to handle complex geological objects and their history of structural development, appropriate geometric models have to be designed. Geological maps, sections, sketches of strain and stress patterns are such well-known analogous two-dimensional models. Normally, the set of observations and measurements supporting them is small in relation to the complexity of the real objects they derive from. Therefore, modelling needs guidance by additional expert knowledge to bridge empty spaces which are not supported by data. Generating digital models of geological objects has some substantial advantages compared to conventional methods, especially if they are supported by an efficient database management system. Consistent 3D models of some complexity can be created, and experiments with time-dependent geological geometries may help to restore coherent sequences of paleogeological states. In order to cope with the problems arising from the combined usage of 3D-geometry models of different scale and resolution within an information system on subsurface geology, geometrical objects need to be annotated with information on the context, within which the geometry model has been established and within which it is valid, and methods supporting storage and retrieval as well as manipulation of geometry at different scales must also take into account and handle such context information to achieve meaningful results. An example is given of a detailed structural study of an open pit lignite mine in the Lower Rhine Basin.
NASA Astrophysics Data System (ADS)
Protaziuk, Elżbieta
2016-06-01
Satellite measurements become competitive in many tasks of engineering surveys, however, in many requiring applications possibilities to apply such solutions are still limited. The possibility to widely apply satellite technologies for displacements measurements is related with new challenges; the most important of them relate to increasing requirements concerning the accuracy, reliability and continuity of results of position determination. One of the solutions is a ground augmentation of satellite network, which intention is to improve precision of positioning, ensure comparable accuracy of coordinates and reduce precision fluctuations over time. The need for augmentation of GNSS is particularly significant in situations: where the visibility of satellites is poor because of terrain obstacles, when the determined position is not precise enough or a satellites constellation does not allow for reliable positioning. Ground based source/sources of satellite signal placed at a ground, called pseudosatellites, or pseudolites were intensively investigated during the last two decades and finally were developed into groundbased, time-synchronized transceivers, that can transmit and receive a proprietary positioning signal. The paper presents geometric aspects of the ground based augmentation of the satellite networks using various quality measures of positioning geometry, which depends on access to the constellation of satellites and the conditions of the observation environment. The issue of minimizing these measures is the key problem that allows to obtain the position with high accuracy. For this purpose, the use of an error ellipsoid is proposed and compared with an error ellipse. The paper also describes the results of preliminary accuracy analysis obtained at test area and a comparison of various measures of the quality of positioning geometry.
Getting inflationary models using the deformation method
NASA Astrophysics Data System (ADS)
Rodrigues, J. J.; Souza, M. A. M.
2015-04-01
In this paper we show that the dynamics associated with slow-roll models of inflation can be investigated through a method called the deformation procedure. Using the latter, we explicitly derive an expression linking two slow-roll inflationary potentials, applying the resulting framework to show how to construct an eternal inflation from chaotic inflation, or even, a natural inflation from hilltop inflation, easily.
Subjective surfaces: a geometric model for boundary completion
Sarti, Alessandro; Malladi, Ravi; Sethian, J.A.
2000-06-01
We present a geometric model and a computational method for segmentation of images with missing boundaries. In many situations, the human visual system fills in missing gaps in edges and boundaries, building and completing information that is not present. Boundary completion presents a considerable challenge in computer vision, since most algorithms attempt to exploit existing data. A large body of work concerns completion models, which postulate how to construct missing data; these models are often trained and specific to particular images. In this paper, we take the following, alternative perspective: we consider a reference point within an image as given, and then develop an algorithm which tries to build missing information on the basis of the given point of view and the available information as boundary data to the algorithm. Starting from this point of view, a surface is constructed. It is then evolved with the mean curvature flow in the metric induced by the image until a piecewise constant solution is reached. We test the computational model on modal completion, amodal completion, texture, photo and medical images. We extend the geometric model and the algorithm to 3D in order to extract shapes from low signal/noise ratio medical volumes. Results in 3D echocardiography and 3D fetal echography are presented.
Modeling plasticity by non-continuous deformation
NASA Astrophysics Data System (ADS)
Ben-Shmuel, Yaron; Altus, Eli
2016-10-01
Plasticity and failure theories are still subjects of intense research. Engineering constitutive models on the macroscale which are based on micro characteristics are very much in need. This study is motivated by the observation that continuum assumptions in plasticity in which neighbour material elements are inseparable at all-time are physically impossible, since local detachments, slips and neighbour switching must operate, i.e. non-continuous deformation. Material microstructure is modelled herein by a set of point elements (particles) interacting with their neighbours. Each particle can detach from and/or attach with its neighbours during deformation. Simulations on two- dimensional configurations subjected to uniaxial compression cycle are conducted. Stochastic heterogeneity is controlled by a single "disorder" parameter. It was found that (a) macro response resembles typical elasto-plastic behaviour; (b) plastic energy is proportional to the number of detachments; (c) residual plastic strain is proportional to the number of attachments, and (d) volume is preserved, which is consistent with macro plastic deformation. Rigid body displacements of local groups of elements are also observed. Higher disorder decreases the macro elastic moduli and increases plastic energy. Evolution of anisotropic effects is obtained with no additional parameters.
Explicit Seesaw Model and Deformed Fermion Universality
NASA Astrophysics Data System (ADS)
Krolikowski, Wojciech
2003-01-01
In the simple model of neutrino texture presented in this paper, the Majorana lefthanded mass matrix is zero, the Majorana righthanded mass matrix --- diagonal and degenerate, and the Dirac mass matrix has a hierarchical structure, deformed unitarily by nearly bimaximal mixing. In the case, when the Majorana righthanded term dominates over the Dirac term, the familiar seesaw mechanism leads effectively to the nearly bimaximal oscillations of active neutrinos, consistent with solar and atmospheric neutrino experiments. If the Dirac term, before its unitary deformation, is similar in shape to the known charged-lepton mass matrix, then parameters for solar ν e's and atmospheric ν μ 's become related to each other, predicting from the SuperKamiokande value of Δ m322 a tiny Δ m212 typical for MSW LOW solar solution rather than for MSW Large Mixing Angle solution. The predicted mass spectrum is then hierarchical. In Appendix a suggestive form of nearly bimaximal effective mass matrix is derived.
Fetal akinesia deformation sequence: an animal model.
Moessinger, A C
1983-12-01
Rat fetuses were paralyzed by daily transuterine injections of curare from day 18 of gestation until term (day 21). The following anomalies were noted at the time of delivery: multiple joint contractures, pulmonary hypoplasia, micrognathia, fetal growth retardation, short umbilical cords, and polyhydramnios. Neither sham-operated nor untouched littermate control fetuses had any of these anomalies. The group of anomalies (or deformation sequence) obtained with this animal model is presumed to result from the paralytic effect of curare. This phenotype bears a striking resemblance to the syndrome of ankyloses, facial anomalies, and pulmonary hypoplasia (also known as Pena and Shokeir I), presumably inherited in an autosomal recessive manner. It is suggested that this phenotype is not specific but, rather, represents a deformation sequence which results from fetal immobilization or akinesia. Diagnostic evaluation of patients with this group of anomalies should include the identification of the underlying pathologic process (etiology of the akinesia) to allow for proper classification and genetic counseling.
Tracking of object deformations in color and depth video: deformation models and applications
NASA Astrophysics Data System (ADS)
Jordt, Andreas; Reinhold, Stefan; Koch, Reinhard
2015-05-01
The research on deformation tracking based on color image data has continuously gained a wide interest in the last 15 years. In addition, using depth sensors such as the Microsoft Kinect, allows to mitigate the ambiguity problems that arise when trying to solve the deformation tracking tasks on color images only, by adding depth information. However, the fusion of color and depth data is not straight forward, and the deformation tracking task is still ill-posed due to the lack of a general deformation model. The problem is usually circumvented by providing special deformation functions for the task at hand, e.g., skeleton-based for reconstructing people or triangle-based for tracking planar surfaces. In this article we summarize the Analysis by Synthesis (AbS) approach for deformation tracking in depth and color video and show some successful applications of specialized deformation functions. To overcome the issues with NURBS based deformation tracking we propose a new geodesic RBF-based deformation model, which can adapt to any surface topology and shape, while keeping the number of deformation parameters low. Example deformations for objects of different topologies are given, showing the versatility and efficiency of the proposed model.
Modelling highly deformable metal extrusion using SPH
NASA Astrophysics Data System (ADS)
Prakash, Mahesh; Cleary, Paul W.
2015-05-01
Computational modelling is often used to reduce trial extrusions through accurate defect prediction. Traditionally, metal extrusion is modelled using mesh based finite element methods. However, large plastic deformations can lead to heavy re-meshing and numerical diffusion. Here we use the mesh-less smoothed particle hydrodynamics method since it allows simulation of large deformations without re-meshing and the tracking of history dependent properties such as plastic strain making it suitable for defect prediction. The variation in plastic strain and deformation for aluminium alloy in a cylindrical 3D geometry with extrusion ratio and die angle is evaluated. The extrusion process is found to have three distinct phases consisting of an initial sharp rise in extrusion force, a steady phase requiring constant force and terminating in a sharp decline in force as metal is completely extruded. Deformation and plastic strain increased significantly with extrusion ratio but only moderately with die angle. Extrusion force increased by 150 % as the extrusion ratio increased from 2:1 to 4:1 but had only a marginal change with die angle. A low strain zone in the centre of the extruded product was found to be a function of extrusion ratio but was persistent and did not vary with die angle. Simulation of a complex 3D building industry component showed large variations in plastic strain along the length of the product at two scales. These were due to change in metal behaviour as extrusion progressed from phase 1 to phase 2. A stagnation zone at the back of the die was predicted that could lead to the "funnel" or "pipe" defect.
Finite beam-width ray model for geometric spectral broadening.
Hoskins, P R; Fish, P J; Pye, S D; Anderson, T
1999-03-01
The purpose of the study was to compare measured spectral width and maximum frequency with that predicted from ray models of geometric spectral broadening. Zero and finite beam-width models were used. Spectral data were acquired from a string phantom using two commonly-used linear array systems. Beam width and Doppler aperture sizes were measured using a needle hydrophone. The results showed that the experimentally measured data agreed best with the finite beam-width model. The zero beam-width model was in error by up to 50% for calculated spectral width, and up to 10% for maximum frequency. It is concluded that spectral width and maximum frequency are best calculated using the finite beam-width model, and that ultrasound manufacturers could improve the variation in spectral broadening measured at different locations on a single machine by adjusting the aperture size to give a constant subtended angle and beam width.
Numerical treatment of a geometrically nonlinear planar Cosserat shell model
NASA Astrophysics Data System (ADS)
Sander, Oliver; Neff, Patrizio; Bîrsan, Mircea
2016-05-01
We present a new way to discretize a geometrically nonlinear elastic planar Cosserat shell. The kinematical model is similar to the general six-parameter resultant shell model with drilling rotations. The discretization uses geodesic finite elements (GFEs), which leads to an objective discrete model which naturally allows arbitrarily large rotations. GFEs of any approximation order can be constructed. The resulting algebraic problem is a minimization problem posed on a nonlinear finite-dimensional Riemannian manifold. We solve this problem using a Riemannian trust-region method, which is a generalization of Newton's method that converges globally without intermediate loading steps. We present the continuous model and the discretization, discuss the properties of the discrete model, and show several numerical examples, including wrinkling of thin elastic sheets in shear.
High-fidelity geometric modeling for biomedical applications
Yu, Zeyun; Holst, Michael J.; Andrew McCammon, J.
2008-05-19
In this paper, we describe a combination of algorithms for high-fidelity geometric modeling and mesh generation. Although our methods and implementations are application-neutral, our primary target application is multiscale biomedical models that range in scales across the molecular, cellular, and organ levels. Our software toolchain implementing these algorithms is general in the sense that it can take as input a molecule in PDB/PQR forms, a 3D scalar volume, or a user-defined triangular surface mesh that may have very low quality. The main goal of our work presented is to generate high quality and smooth surface triangulations from the aforementioned inputs, and to reduce the mesh sizes by mesh coarsening. Tetrahedral meshes are also generated for finite element analysis in biomedical applications. Experiments on a number of bio-structures are demonstrated, showing that our approach possesses several desirable properties: feature-preservation, local adaptivity, high quality, and smoothness (for surface meshes). Finally, the availability of this software toolchain will give researchers in computational biomedicine and other modeling areas access to higher-fidelity geometric models.
Body circumferences: clinical implications emerging from a new geometric model
Heymsfield, Steven B; Martin-Nguyen, Allison; Fong, Tung M; Gallagher, Dympna; Pietrobelli, Angelo
2008-01-01
Background Body volume expands with the positive energy balance associated with the development of adult human obesity and this "growth" is captured by two widely used clinical metrics, waist circumference and body mass index (BMI). Empirical correlations between circumferences, BMI, and related body compartments are frequently reported but fail to provide an important common conceptual foundation that can be related to key clinical observations. A two-phase program was designed to fill this important gap: a geometric model linking body volume with circumferences and BMI was developed and validated in cross-sectional cohorts; and the model was applied to the evaluation of longitudinally monitored subjects during periods of voluntary weight loss. Concepts emerging from the developed model were then used to examine the relations between the evaluated clinical measures and body composition. Methods Two groups of healthy adults (n = 494 and 1499) were included in the cross-sectional model development/testing phase and subjects in two previous weight loss studies were included in the longitudinal model evaluation phase. Five circumferences (arm, waist, hip, thigh, and calf; average of sum, C), height (H), BMI, body volume (V; underwater weighing), and the volumes of major body compartments (whole-body magnetic resonance imaging) were measured. Results The evaluation of a humanoid geometric model based a cylinder confirmed that V derived from C and H was highly correlated with measured V [R2 both males and females, 0.97; p < 0.001). Developed allometric models confirmed model predictions that C and BMI (represented as V/H) are directly linked as, C = (V/H)0.5. The scaling of individual circumferences to V/H varied, with waist the highest (V/H~0.6) and calf the lowest (V/H~0.3), indicating that the largest and smallest between-subject "growth" with greater body volume occurs in the abdominal area and lower extremities, respectively. A stepwise linear regression model
Geometric modeling of inflatable structures for lunar base
NASA Technical Reports Server (NTRS)
Nowak, Paul S.; Sadeh, Willy Z.; Morroni, Loretta A.
1992-01-01
A modular inflatable structure consisting of thin, composite membranes is presented for use in a lunar base. Results from a linear elastic analysis of the structure indicate that it is feasible in the lunar environment. Further analysis requires solving nonlinear equations and accurately specifying the geometries of the structural members. A computerized geometric modeling technique, using bicubic Bezier surfaces to generate the geometries of the inflatable structure, was conducted. Simulated results are used to create three-dimensional wire frames and solid renderings of the individual components of the inflatable structure. The component geometries are connected into modules, which are then assembled based upon the desired architecture of the structure.
Geometric modeling of inflatable structures for lunar base
NASA Technical Reports Server (NTRS)
Nowak, Paul S.; Sadeh, Willy Z.; Morroni, Loretta A.
1992-01-01
A modular inflatable structure consisting of thin, composite membranes is presented for use in a lunar base. Results from a linear elastic analysis of the structure indicate that it is feasible in the lunar environment. Further analysis requires solving nonlinear equations and accurately specifying the geometries of the structural members. A computerized geometric modeling technique, using bicubic Bezier surfaces to generate the geometries of the inflatable structure, was conducted. Simulated results are used to create three-dimensional wire frames and solid renderings of the individual components of the inflatable structure. The component geometries are connected into modules, which are then assembled based upon the desired architecture of the structure.
Geometric modeling of inflatable structures for lunar base.
Nowak, P S; Sadeh, W Z; Morroni, L A
1992-07-01
A modular inflatable structure consisting of thin, composite membranes is presented for use in a lunar base. Results from a linear elastic analysis of the structure indicate that it is feasible in the lunar environment. Further analysis requires solving nonlinear equations and accurately specifying the geometries of the structural members. A computerized geometric modeling technique, using bicubic Bezier surfaces to generate the geometries of the inflatable structure, was conducted. Simulated results are used to create three-dimensional wire frames and solid renderings of the individual components of the inflatable structure. The component geometries are connected into modules, which are then assembled based upon the desired architecture of the structure.
Modeling plastic deformation effect on magnetization in ferromagnetic materials
NASA Astrophysics Data System (ADS)
Li, Jianwei; Xu, Minqiang; Leng, Jiancheng; Xu, Mingxiu
2012-03-01
Based on the Sablik-Landgraf model, an integrated model has been developed which provides a description of the effect of plastic deformation on magnetization. The modeling approach is to incorporate the effect of plastic deformation on the effective field and that on the model parameters. The effective field incorporates the contributions of residual stress, stress demagnetization term, and the plastic deformation. We also consider the effect of plastic deformation on the model parameters: pinning coefficient, the scaling constant and the interdomain coupling coefficient. The computed magnetization exhibits sharp change in the preliminary stage of plastic deformation, and then decreases slowly with the increase of plastic strain, in agreement with experimental results.
Shen, Z; Greskovich, J; Xia, P; Bzdusek, K
2015-06-15
Purpose: To generate virtual phantoms with clinically relevant deformation and use them to objectively evaluate geometric and dosimetric uncertainties of deformable image registration (DIR) algorithms. Methods: Ten lung cancer patients undergoing adaptive 3DCRT planning were selected. For each patient, a pair of planning CT (pCT) and replanning CT (rCT) were used as the basis for virtual phantom generation. Manually adjusted meshes were created for selected ROIs (e.g. PTV, lungs, spinal cord, esophagus, and heart) on pCT and rCT. The mesh vertices were input into a thin-plate spline algorithm to generate a reference displacement vector field (DVF). The reference DVF was used to deform pCT to generate a simulated replanning CT (srCT) that was closely matched to rCT. Three DIR algorithms (Demons, B-Spline, and intensity-based) were applied to these ten virtual phantoms. The images, ROIs, and doses were mapped from pCT to srCT using the DVFs computed by these three DIRs and compared to those mapped using the reference DVF. Results: The average Dice coefficients for selected ROIs were from 0.85 to 0.96 for Demons, from 0.86 to 0.97 for intensity-based, and from 0.76 to 0.95 for B-Spline. The average Hausdorff distances for selected ROIs were from 2.2 to 5.4 mm for Demons, from 2.3 to 6.8 mm for intensity-based, and from 2.4 to 11.4 mm for B-Spline. The average absolute dose errors for selected ROIs were from 0.2 to 0.6 Gy for Demons, from 0.1 to 0.5 Gy for intensity-based, and from 0.5 to 1.5 Gy for B-Spline. Conclusion: Virtual phantoms were modeled after patients with lung cancer and were clinically relevant for adaptive radiotherapy treatment replanning. Virtual phantoms with known DVFs serve as references and can provide a fair comparison when evaluating different DIRs. Demons and intensity-based DIRs were shown to have smaller geometric and dosimetric uncertainties than B-Spline. Z Shen: None; K Bzdusek: an employee of Philips Healthcare; J Greskovich: None; P Xia
Geometric and Textural Blending for 3D Model Stylization.
Huang, YiJheng; Lin, Wen-Chieh; Yeh, I-Cheng; Lee, Tong-Yee
2017-01-25
Stylizing a 3D model with characteristic shapes or appearances is common in product design, particularly in the design of 3D model merchandise, such as souvenirs, toys, furniture, and stylized items. A model stylization approach is proposed in this study. The approach combines base and style models while preserving user-specified shape features of the base model and the attractive features of the style model with limited assistance from a user. The two models are first combined at the topological level. A tree-growing technique is utilized to search for all possible combinations of the two models. Second, the models are combined at textural and geometric levels by employing a morphing technique. Results show that the proposed approach generates various appealing models and allows users to control the diversity of the output models and adjust the blending degree between the base and style models. The results of this work are also experimentally compared with those of a recent work through a user study. The comparison indicates that our results are more appealing, feature-preserving, and reasonable than those of the compared previous study. The proposed system allows product designers to easily explore design possibilities and assists novice users in creating their own stylized models.
Hopping electron model with geometrical frustration: kinetic Monte Carlo simulations
NASA Astrophysics Data System (ADS)
Terao, Takamichi
2016-09-01
The hopping electron model on the Kagome lattice was investigated by kinetic Monte Carlo simulations, and the non-equilibrium nature of the system was studied. We have numerically confirmed that aging phenomena are present in the autocorrelation function C ({t,tW )} of the electron system on the Kagome lattice, which is a geometrically frustrated lattice without any disorder. The waiting-time distributions p(τ ) of hopping electrons of the system on Kagome lattice has been also studied. It is confirmed that the profile of p (τ ) obtained at lower temperatures obeys the power-law behavior, which is a characteristic feature of continuous time random walk of electrons. These features were also compared with the characteristics of the Coulomb glass model, used as a model of disordered thin films and doped semiconductors. This work represents an advance in the understanding of the dynamics of geometrically frustrated systems and will serve as a basis for further studies of these physical systems.
Solar UV geometric conversion factors: horizontal plane to cylinder model.
Pope, Stanley J; Godar, Dianne E
2010-01-01
Most solar UV measurements are relative to the horizontal plane. However, problems arise when one uses those UV measurements to perform risk or benefit assessments because they do not yield the actual doses people get while they are outdoors. To better estimate the UV doses people actually get while outdoors, scientists need geometric conversion factors (GCF) that change horizontal plane irradiances to average irradiances on the human body. Here we describe a simple geometric method that changes unweighted, erythemally weighted and previtamin D(3)-weighted UV irradiances on the horizontal plane to full cylinder and semicylinder irradiances. Scientists can use the full cylinder model to represent the complete human body, while they can use the semicylinder model to represent the face, shoulders, tops of hands and feet. We present daily, monthly and seasonally calculated averages of the GCF for these cylinder models every 5 degrees from 20 to 70 degrees N so that scientists can now get realistic UV doses for people who are outdoors doing a variety of different activities. The GCF show that people actually get less than half their annual erythemally weighted, and consequently half their previtamin D(3)-weighted, UV doses relative to the horizontal plane. Thus, scientists can now perform realistic UV risk and benefit assessments.
A tumor growth model with deformable ECM.
Sciumè, G; Santagiuliana, R; Ferrari, M; Decuzzi, P; Schrefler, B A
2014-11-26
Existing tumor growth models based on fluid analogy for the cells do not generally include the extracellular matrix (ECM), or if present, take it as rigid. The three-fluid model originally proposed by the authors and comprising tumor cells (TC), host cells (HC), interstitial fluid (IF) and an ECM, considered up to now only a rigid ECM in the applications. This limitation is here relaxed and the deformability of the ECM is investigated in detail. The ECM is modeled as a porous solid matrix with Green-elastic and elasto-visco-plastic material behavior within a large strain approach. Jauman and Truesdell objective stress measures are adopted together with the deformation rate tensor. Numerical results are first compared with those of a reference experiment of a multicellular tumor spheroid (MTS) growing in vitro, then three different tumor cases are studied: growth of an MTS in a decellularized ECM, growth of a spheroid in the presence of host cells and growth of a melanoma. The influence of the stiffness of the ECM is evidenced and comparison with the case of a rigid ECM is made. The processes in a deformable ECM are more rapid than in a rigid ECM and the obtained growth pattern differs. The reasons for this are due to the changes in porosity induced by the tumor growth. These changes are inhibited in a rigid ECM. This enhanced computational model emphasizes the importance of properly characterizing the biomechanical behavior of the malignant mass in all its components to correctly predict its temporal and spatial pattern evolution.
A tumor growth model with deformable ECM
Sciumè, G; Santagiuliana, R; Ferrari, M; Decuzzi, P; Schrefler, B A
2015-01-01
Existing tumor growth models based on fluid analogy for the cells do not generally include the extracellular matrix (ECM), or if present, take it as rigid. The three-fluid model originally proposed by the authors and comprising tumor cells (TC), host cells (HC), interstitial fluid (IF) and an ECM, considered up to now only a rigid ECM in the applications. This limitation is here relaxed and the deformability of the ECM is investigated in detail. The ECM is modeled as a porous solid matrix with Green-elastic and elasto-visco-plastic material behavior within a large strain approach. Jauman and Truesdell objective stress measures are adopted together with the deformation rate tensor. Numerical results are first compared with those of a reference experiment of a multicellular tumor spheroid (MTS) growing in vitro, then three different tumor cases are studied: growth of an MTS in a decellularized ECM, growth of a spheroid in the presence of host cells and growth of a melanoma. The influence of the stiffness of the ECM is evidenced and comparison with the case of a rigid ECM is made. The processes in a deformable ECM are more rapid than in a rigid ECM and the obtained growth pattern differs. The reasons for this are due to the changes in porosity induced by the tumor growth. These changes are inhibited in a rigid ECM. This enhanced computational model emphasizes the importance of properly characterizing the biomechanical behavior of the malignant mass in all its components to correctly predict its temporal and spatial pattern evolution. PMID:25427284
NASA Astrophysics Data System (ADS)
Rafiee, M.; Liu, X. F.; He, X. Q.; Kitipornchai, S.
2014-07-01
The nonlinear free vibration of carbon nanotubes/fiber/polymer composite (CNTFPC) multi-scale plates with surface-bonded piezoelectric actuators is studied in this paper. The governing equations of the piezoelectric nanotubes/fiber/polymer multiscale laminated composite plates are derived based on first-order shear deformation plate theory (FSDT) and von Kármán geometrical nonlinearity. Halpin-Tsai equations and fiber micromechanics are used in hierarchy to predict the bulk material properties of the multiscale composite. The carbon nanotubes are assumed to be uniformly distributed and randomly oriented through the epoxy resin matrix. A perturbation scheme of multiple time scales is employed to determine the nonlinear vibration response and the nonlinear natural frequencies of the plates with immovable simply supported boundary conditions. The effects of the applied constant voltage, plate geometry, volume fraction of fibers and weight percentage of single-walled carbon nanotubes (SWCNTs) and multi-walled carbon nanotubes (MWCNTs) on the linear and nonlinear natural frequencies of the piezoelectric nanotubes/fiber/polymer multiscale composite plate are investigated through a detailed parametric study.
A Geometrically Exact Model for Externally Loaded Concentric-Tube Continuum Robots.
Rucker, D Caleb; Jones, Bryan A; Webster, Robert J
2010-01-01
Continuum robots, which are composed of multiple concentric, precurved elastic tubes, can provide dexterity at diameters equivalent to standard surgical needles. Recent mechanics-based models of these "active cannulas" are able to accurately describe the curve of the robot in free space, given the preformed tube curves and the linear and angular positions of the tube bases. However, in practical applications, where the active cannula must interact with its environment or apply controlled forces, a model that accounts for deformation under external loading is required. In this paper, we apply geometrically exact rod theory to produce a forward kinematic model that accurately describes large deflections due to a general collection of externally applied point and/or distributed wrench loads. This model accommodates arbitrarily many tubes, with each having a general preshaped curve. It also describes the independent torsional deformation of the individual tubes. Experimental results are provided for both point and distributed loads. Average tip error under load was 2.91 mm (1.5%-3% of total robot length), which is similar to the accuracy of existing free-space models.
A Geometrically Exact Model for Externally Loaded Concentric-Tube Continuum Robots
Rucker, D. Caleb; Jones, Bryan A.; Webster, Robert J.
2011-01-01
Continuum robots, which are composed of multiple concentric, precurved elastic tubes, can provide dexterity at diameters equivalent to standard surgical needles. Recent mechanics-based models of these “active cannulas” are able to accurately describe the curve of the robot in free space, given the preformed tube curves and the linear and angular positions of the tube bases. However, in practical applications, where the active cannula must interact with its environment or apply controlled forces, a model that accounts for deformation under external loading is required. In this paper, we apply geometrically exact rod theory to produce a forward kinematic model that accurately describes large deflections due to a general collection of externally applied point and/or distributed wrench loads. This model accommodates arbitrarily many tubes, with each having a general preshaped curve. It also describes the independent torsional deformation of the individual tubes. Experimental results are provided for both point and distributed loads. Average tip error under load was 2.91 mm (1.5%–3% of total robot length), which is similar to the accuracy of existing free-space models. PMID:21566688
Miranda, Alexandre F; Sampaio, Francisco J B
2014-06-01
A surgical approach with plaque incision and graft (PIG) to correct Peyronie's disease is the best method for complex, large deviations. However, the geometric and mechanical consequences of this intervention are poorly understood. The aim of this study was to analyze the geometric and mechanical consequences of PIG on penile straighten surgery. A tridimensional penile simile model with a curvature of 85° was created to test all of the most common PIG techniques. PIG with double-Y, H-shape, and Egydio techniques were used to rectify the curved penile model. The results that differed from a rectified cylinder shape were highlighted. All of the analyzed techniques created a geometric distortion that could be linked to poor surgical results. We suggest a new technique to resolve these abnormalities. Current techniques designed to correct penile deviation using PIG present geometric and mechanical imperfections with potential consequences to the postoperative success rate. The new technique proposed in this report could be a possible solution to solve the geometric distortion caused by PIG. © 2014 International Society for Sexual Medicine.
Implicit modeling of folds and overprinting deformation
NASA Astrophysics Data System (ADS)
Laurent, Gautier; Ailleres, Laurent; Grose, Lachlan; Caumon, Guillaume; Jessell, Mark; Armit, Robin
2016-12-01
Three-dimensional structural modeling is gaining importance for a broad range of quantitative geoscientific applications. However, existing approaches are still limited by the type of structural data they are able to use and by their lack of structural meaning. Most techniques heavily rely on spatial data for modeling folded layers, but are unable to completely use cleavage and lineation information for constraining the shape of modeled folds. This lack of structural control is generally compensated by expert knowledge introduced in the form of additional interpretive data such as cross-sections and maps. With this approach, folds are explicitly designed by the user instead of being derived from data. This makes the resulting structures subjective and deterministic. This paper introduces a numerical framework for modeling folds and associated foliations from typical field data. In this framework, a parametric description of fold geometry is incorporated into the interpolation algorithm. This way the folded geometry is implicitly derived from observed data, while being controlled through structural parameters such as fold wavelength, amplitude and tightness. A fold coordinate system is used to support the numerical description of fold geometry and to modify the behavior of classical structural interpolators. This fold frame is constructed from fold-related structural elements such as axial foliations, intersection lineations, and vergence. Poly-deformed terranes are progressively modeled by successively modeling each folding event going backward through time. The proposed framework introduces a new modeling paradigm, which enables the building of three-dimensional geological models of complex poly-deformed terranes. It follows a process based on the structural geologist approach and is able to produce geomodels that honor both structural data and geological knowledge.
Cox, P G; Fagan, M J; Rayfield, E J; Jeffery, N
2011-12-01
Rodents are defined by a uniquely specialized dentition and a highly complex arrangement of jaw-closing muscles. Finite element analysis (FEA) is an ideal technique to investigate the biomechanical implications of these specializations, but it is essential to understand fully the degree of influence of the different input parameters of the FE model to have confidence in the model's predictions. This study evaluates the sensitivity of FE models of rodent crania to elastic properties of the materials, loading direction, and the location and orientation of the models' constraints. Three FE models were constructed of squirrel, guinea pig and rat skulls. Each was loaded to simulate biting on the incisors, and the first and the third molars, with the angle of the incisal bite varied over a range of 45°. The Young's moduli of the bone and teeth components were varied between limits defined by findings from our own and previously published tests of material properties. Geometric morphometrics (GMM) was used to analyse the resulting skull deformations. Bone stiffness was found to have the strongest influence on the results in all three rodents, followed by bite position, and then bite angle and muscle orientation. Tooth material properties were shown to have little effect on the deformation of the skull. The effect of bite position varied between species, with the mesiodistal position of the biting tooth being most important in squirrels and guinea pigs, whereas bilateral vs. unilateral biting had the greatest influence in rats. A GMM analysis of isolated incisor deformations showed that, for all rodents, bite angle is the most important parameter, followed by elastic properties of the tooth. The results here elucidate which input parameters are most important when defining the FE models, but also provide interesting glimpses of the biomechanical differences between the three skulls, which will be fully explored in future publications. © 2011 The Authors. Journal of
Badawi, Ahmed M; Weiss, Elisabeth; Sleeman, William C; Hugo, Geoffrey D
2012-01-21
The purpose of this study is to develop and evaluate a lung tumour interfraction geometric variability classification scheme as a means to guide adaptive radiotherapy and improve measurement of treatment response. Principal component analysis (PCA) was used to generate statistical shape models of the gross tumour volume (GTV) for 12 patients with weekly breath hold CT scans. Each eigenmode of the PCA model was classified as 'trending' or 'non-trending' depending on whether its contribution to the overall GTV variability included a time trend over the treatment course. Trending eigenmodes were used to reconstruct the original semi-automatically delineated GTVs into a reduced model containing only time trends. Reduced models were compared to the original GTVs by analyzing the reconstruction error in the GTV and position. Both retrospective (all weekly images) and prospective (only the first four weekly images) were evaluated. The average volume difference from the original GTV was 4.3% ± 2.4% for the trending model. The positional variability of the GTV over the treatment course, as measured by the standard deviation of the GTV centroid, was 1.9 ± 1.4 mm for the original GTVs, which was reduced to 1.2 ± 0.6 mm for the trending-only model. In 3/13 cases, the dominant eigenmode changed class between the prospective and retrospective models. The trending-only model preserved GTV and shape relative to the original GTVs, while reducing spurious positional variability. The classification scheme appears feasible for separating types of geometric variability by time trend.
Geometrical optical modeling considerations for LCD projector display systems
NASA Astrophysics Data System (ADS)
Schweyen, John C.; Garcia, Kevin J.; Gleckman, Philip L.
1997-05-01
End-to-end modeling of the photometric performance of LCD projection system using Monte Carlo geometrical ray tracing methods is an accurate and precise tool for predicting and improving the performance of these deices before, during and after product development. However, an accurate simulation first requires considering which physical properties contribute most to the system's photometric performance. Second, these properties must be characterized by physical measurements and translated into the tangible modeling parameters of a ray tracing program. Third, the implications of using a Monte Carlo ray tracing algorithm, and in general any other optical transformation algorithm, on radiometric accuracy must be well understood. These considerations as well as a generalized approach to the characterization and simulation of an LCD projector are described. A commercially available ray tracing program, the Advanced Systems Analysis Program, is used to demonstrate this approach. The irradiance uniformity, CIE color performance and screen brightness of an arc source LCD projector system are computed as an example.
Cox, P G; Fagan, M J; Rayfield, E J; Jeffery, N
2011-01-01
Rodents are defined by a uniquely specialized dentition and a highly complex arrangement of jaw-closing muscles. Finite element analysis (FEA) is an ideal technique to investigate the biomechanical implications of these specializations, but it is essential to understand fully the degree of influence of the different input parameters of the FE model to have confidence in the model's predictions. This study evaluates the sensitivity of FE models of rodent crania to elastic properties of the materials, loading direction, and the location and orientation of the models’ constraints. Three FE models were constructed of squirrel, guinea pig and rat skulls. Each was loaded to simulate biting on the incisors, and the first and the third molars, with the angle of the incisal bite varied over a range of 45°. The Young's moduli of the bone and teeth components were varied between limits defined by findings from our own and previously published tests of material properties. Geometric morphometrics (GMM) was used to analyse the resulting skull deformations. Bone stiffness was found to have the strongest influence on the results in all three rodents, followed by bite position, and then bite angle and muscle orientation. Tooth material properties were shown to have little effect on the deformation of the skull. The effect of bite position varied between species, with the mesiodistal position of the biting tooth being most important in squirrels and guinea pigs, whereas bilateral vs. unilateral biting had the greatest influence in rats. A GMM analysis of isolated incisor deformations showed that, for all rodents, bite angle is the most important parameter, followed by elastic properties of the tooth. The results here elucidate which input parameters are most important when defining the FE models, but also provide interesting glimpses of the biomechanical differences between the three skulls, which will be fully explored in future publications. PMID:21974720
Modelling Polymer Deformation during 3D Printing
NASA Astrophysics Data System (ADS)
McIlroy, Claire; Olmsted, Peter
Three-dimensional printing has the potential to transform manufacturing processes, yet improving the strength of printed parts, to equal that of traditionally-manufactured parts, remains an underlying issue. The fused deposition modelling technique involves melting a thermoplastic, followed by layer-by-layer extrusion to fabricate an object. The key to ensuring strength at the weld between layers is successful inter-diffusion. However, prior to welding, both the extrusion process and the cooling temperature profile can significantly deform the polymer micro-structure and, consequently, how well the polymers are able to ``re-entangle'' across the weld. In particular, polymer alignment in the flow can cause de-bonding of the layers and create defects. We have developed a simple model of the non-isothermal extrusion process to explore the effects that typical printing conditions and material rheology have on the conformation of a polymer melt. In particular, we incorporate both stretch and orientation using the Rolie-Poly constitutive equation to examine the melt structure as it flows through the nozzle, the subsequent alignment with the build plate and the resulting deformation due to the fixed nozzle height, which is typically less than the nozzle radius.
Rule-based spatial modeling with diffusing, geometrically constrained molecules.
Gruenert, Gerd; Ibrahim, Bashar; Lenser, Thorsten; Lohel, Maiko; Hinze, Thomas; Dittrich, Peter
2010-06-07
We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our approach molecules possess a location in the reactor as well as an orientation and geometry, while the reactions are carried out according to a list of implicitly specified reaction rules. Because the reaction rules can contain patterns for molecules, a combinatorially complex or even infinitely sized reaction network can be defined. For our implementation (based on LAMMPS), we have chosen an already existing formalism (BioNetGen) for the implicit specification of the reaction network. This compatibility allows to import existing models easily, i.e., only additional geometry data files have to be provided. Our simulations show that the obtained dynamics can be fundamentally different from those simulations that use classical reaction-diffusion approaches like Partial Differential Equations or Gillespie-type spatial stochastic simulation. We show, for example, that the combination of combinatorial complexity and geometric effects leads to the emergence of complex self-assemblies and transportation phenomena happening faster than diffusion (using a model of molecular walkers on microtubules). When the mentioned classical simulation approaches are applied, these aspects of modeled systems cannot be observed without very special treatment. Further more, we show that the geometric information can even change the organizational structure of the reaction system. That is, a set of chemical species that can in principle form a stationary state in a Differential Equation formalism, is potentially unstable when geometry is considered, and vice versa. We conclude that our approach provides a new general framework filling a gap in between approaches with no or rigid spatial representation like Partial Differential Equations and specialized coarse-grained spatial simulation systems like those for DNA or virus capsid
Methods for Geometric Data Validation of 3d City Models
NASA Astrophysics Data System (ADS)
Wagner, D.; Alam, N.; Wewetzer, M.; Pries, M.; Coors, V.
2015-12-01
Geometric quality of 3D city models is crucial for data analysis and simulation tasks, which are part of modern applications of the data (e.g. potential heating energy consumption of city quarters, solar potential, etc.). Geometric quality in these contexts is however a different concept as it is for 2D maps. In the latter case, aspects such as positional or temporal accuracy and correctness represent typical quality metrics of the data. They are defined in ISO 19157 and should be mentioned as part of the metadata. 3D data has a far wider range of aspects which influence their quality, plus the idea of quality itself is application dependent. Thus, concepts for definition of quality are needed, including methods to validate these definitions. Quality on this sense means internal validation and detection of inconsistent or wrong geometry according to a predefined set of rules. A useful starting point would be to have correct geometry in accordance with ISO 19107. A valid solid should consist of planar faces which touch their neighbours exclusively in defined corner points and edges. No gaps between them are allowed, and the whole feature must be 2-manifold. In this paper, we present methods to validate common geometric requirements for building geometry. Different checks based on several algorithms have been implemented to validate a set of rules derived from the solid definition mentioned above (e.g. water tightness of the solid or planarity of its polygons), as they were developed for the software tool CityDoctor. The method of each check is specified, with a special focus on the discussion of tolerance values where they are necessary. The checks include polygon level checks to validate the correctness of each polygon, i.e. closeness of the bounding linear ring and planarity. On the solid level, which is only validated if the polygons have passed validation, correct polygon orientation is checked, after self-intersections outside of defined corner points and edges
Geometrical model for DBMS: an experimental DBMS using IBM solid modeling
Ali, D.E.D.L.
1985-01-01
This research presents a new model for data base management systems (DBMS). The new model, Geometrical DBMS, is based on using solid modelling technology in designing and implementing DBMS. The Geometrical DBMS is implemented using the IBM solid modelling Geometric Design Processor (GDP). Built basically on computer-graphics concepts, Geometrical DBMS is indeed a unique model. Traditionally, researchers start with one of the existent DBMS models and then put a graphical front end on it. In Geometrical DBMS, the graphical aspect of the model is not an alien concept tailored to the model but is, as a matter of fact, the atom around which the model is designed. The main idea in Geometrical DBMS is to allow the user and the system to refer to and manipulate data items as a solid object in 3D space, and representing a record as a group of logically related solid objects. In Geometical DBMS, hierarchical structure is used to present the data relations and the user sees the data as a group of arrays; yet, for the user and the system together, the data structure is a multidimensional tree.
Geometric algorithms for electromagnetic modeling of large scale structures
NASA Astrophysics Data System (ADS)
Pingenot, James
With the rapid increase in the speed and complexity of integrated circuit designs, 3D full wave and time domain simulation of chip, package, and board systems becomes more and more important for the engineering of modern designs. Much effort has been applied to the problem of electromagnetic (EM) simulation of such systems in recent years. Major advances in boundary element EM simulations have led to O(n log n) simulations using iterative methods and advanced Fast. Fourier Transform (FFT), Multi-Level Fast Multi-pole Methods (MLFMM), and low-rank matrix compression techniques. These advances have been augmented with an explosion of multi-core and distributed computing technologies, however, realization of the full scale of these capabilities has been hindered by cumbersome and inefficient geometric processing. Anecdotal evidence from industry suggests that users may spend around 80% of turn-around time manipulating the geometric model and mesh. This dissertation addresses this problem by developing fast and efficient data structures and algorithms for 3D modeling of chips, packages, and boards. The methods proposed here harness the regular, layered 2D nature of the models (often referred to as "2.5D") to optimize these systems for large geometries. First, an architecture is developed for efficient storage and manipulation of 2.5D models. The architecture gives special attention to native representation of structures across various input models and special issues particular to 3D modeling. The 2.5D structure is then used to optimize the mesh systems First, circuit/EM co-simulation techniques are extended to provide electrical connectivity between objects. This concept is used to connect independently meshed layers, allowing simple and efficient 2D mesh algorithms to be used in creating a 3D mesh. Here, adaptive meshing is used to ensure that the mesh accurately models the physical unknowns (current and charge). Utilizing the regularized nature of 2.5D objects and
Dosimetric treatment course simulation based on a statistical model of deformable organ motion.
Söhn, M; Sobotta, B; Alber, M
2012-06-21
We present a method of modeling dosimetric consequences of organ deformation and correlated motion of adjacent organ structures in radiotherapy. Based on a few organ geometry samples and the respective deformation fields as determined by deformable registration, principal component analysis (PCA) is used to create a low-dimensional parametric statistical organ deformation model (Söhn et al 2005 Phys. Med. Biol. 50 5893-908). PCA determines the most important geometric variability in terms of eigenmodes, which represent 3D vector fields of correlated organ deformations around the mean geometry. Weighted sums of a few dominating eigenmodes can be used to simulate synthetic geometries, which are statistically meaningful inter- and extrapolations of the input geometries, and predict their probability of occurrence. We present the use of PCA as a versatile treatment simulation tool, which allows comprehensive dosimetric assessment of the detrimental effects that deformable geometric uncertainties can have on a planned dose distribution. For this, a set of random synthetic geometries is generated by a PCA model for each simulated treatment course, and the dose of a given treatment plan is accumulated in the moving tissue elements via dose warping. This enables the calculation of average voxel doses, local dose variability, dose-volume histogram uncertainties, marginal as well as joint probability distributions of organ equivalent uniform doses and thus of TCP and NTCP, and other dosimetric and biologic endpoints. The method is applied to the example of deformable motion of prostate/bladder/rectum in prostate IMRT. Applications include dosimetric assessment of the adequacy of margin recipes, adaptation schemes, etc, as well as prospective 'virtual' evaluation of the possible benefits of new radiotherapy schemes.
Geometric and colour data fusion for outdoor 3D models.
Merchán, Pilar; Adán, Antonio; Salamanca, Santiago; Domínguez, Vicente; Chacón, Ricardo
2012-01-01
This paper deals with the generation of accurate, dense and coloured 3D models of outdoor scenarios from scanners. This is a challenging research field in which several problems still remain unsolved. In particular, the process of 3D model creation in outdoor scenes may be inefficient if the scene is digitalized under unsuitable technical (specific scanner on-board camera) and environmental (rain, dampness, changing illumination) conditions. We address our research towards the integration of images and range data to produce photorealistic models. Our proposal is based on decoupling the colour integration and geometry reconstruction stages, making them independent and controlled processes. This issue is approached from two different viewpoints. On the one hand, given a complete model (geometry plus texture), we propose a method to modify the original texture provided by the scanner on-board camera with the colour information extracted from external images taken at given moments and under specific environmental conditions. On the other hand, we propose an algorithm to directly assign external images onto the complete geometric model, thus avoiding tedious on-line calibration processes. We present the work conducted on two large Roman archaeological sites dating from the first century A.D., namely, the Theatre of Segobriga and the Fori Porticus of Emerita Augusta, both in Spain. The results obtained demonstrate that our approach could be useful in the digitalization and 3D modelling fields.
Geometric and Colour Data Fusion for Outdoor 3D Models
Merchán, Pilar; Adán, Antonio; Salamanca, Santiago; Domínguez, Vicente; Chacón, Ricardo
2012-01-01
This paper deals with the generation of accurate, dense and coloured 3D models of outdoor scenarios from scanners. This is a challenging research field in which several problems still remain unsolved. In particular, the process of 3D model creation in outdoor scenes may be inefficient if the scene is digitalized under unsuitable technical (specific scanner on-board camera) and environmental (rain, dampness, changing illumination) conditions. We address our research towards the integration of images and range data to produce photorealistic models. Our proposal is based on decoupling the colour integration and geometry reconstruction stages, making them independent and controlled processes. This issue is approached from two different viewpoints. On the one hand, given a complete model (geometry plus texture), we propose a method to modify the original texture provided by the scanner on-board camera with the colour information extracted from external images taken at given moments and under specific environmental conditions. On the other hand, we propose an algorithm to directly assign external images onto the complete geometric model, thus avoiding tedious on-line calibration processes. We present the work conducted on two large Roman archaeological sites dating from the first century A.D., namely, the Theatre of Segobriga and the Fori Porticus of Emerita Augusta, both in Spain. The results obtained demonstrate that our approach could be useful in the digitalization and 3D modelling fields. PMID:22969327
Geometric modelling of viscosity of copper-containing liquid alloys
NASA Astrophysics Data System (ADS)
Dogan, Ali; Arslan, Hüseyin
2016-02-01
In this work, viscosities of ternary Au-Ag-Cu and Al-Cu-Si liquid alloys have been calculated as a function of gold, aluminium and copper compositions for the sections Au-Ag-Cu (xAg/xCu = 0.543 at 1373 K), Alx(Cu50-Si50)(1-x) and Cux(Al50-Si50)(1-x) at 1375 K using Chou's general solution model, Muggianu, Kohler, Toop, Hillert, Budai et al., Kozlov et al., Schick et al. and Kaptay et al. models. The present study finds that a comparison of the predicted values of viscosities associated with the geometric and physical models indicate good mutual agreement. The Muggianu model indicates the best agreement with the results obtained for Au-Ag-Cu and Alx-Cu50-Si50 alloy systems and the Kaptay et al. model, which is a physical model, indicates the best agreement with the results obtained for Al50-Cux-Si50.
A responsive finite element method to aid interactive geometric modeling.
Umetani, N; Takayama, K; Mitani, J; Igarashi, T
2011-01-01
Current computer-aided engineering systems use numerical-simulation methods mainly as offline verification tools to reject designs that don't satisfy the required constraints, rather than as tools to guide users toward better designs. However, integrating real-time finite element method (FEM) into interactive geometric modeling can provide user guidance. During interactive editing, real-time feedback from numerical simulation guides users toward an improved design without tedious trial-and-error iterations. Careful reuse of previous computation results, such as meshes and matrices, on the basis of speed and accuracy trade-offs, have helped produce fast FEM analysis during interactive editing. Several 2D example applications and informal user studies show this approach's effectiveness. Such tools could help nonexpert users design objects that satisfy physical constraints and help those users understand the underlying physical properties.
Vacuum Stability in Kaluza-Klein Geometric Sigma Models
NASA Astrophysics Data System (ADS)
Vasilić, M.
2002-09-01
In Kaluza-Klein geometric sigma models, the scalar fields coupled to higher-dimensional gravity are pure gauge. The gauge fixed theory contains no matter fields, and can consistently be reduced to 4 dimensions, provided the internal space is chosen in the form of a group manifold. The effective 4-dimensional theory includes standard Einstein and Yang-Mills sectors, and is free of the classical cosmological constant problem. In this paper, the stability of the internal excitations is analyzed. It is shown that the initial Lagrangian can be modified to lead to a classically stable effective 4-dimensional theory, independently of the particular group used, and retaining all the basic features of the unmodified theory.
Geometrical properties of the Potts model during the coarsening regime.
Loureiro, Marcos P O; Arenzon, Jeferson J; Cugliandolo, Leticia F
2012-02-01
We study the dynamic evolution of geometric structures in a polydegenerate system represented by a q-state Potts model with nonconserved order parameter that is quenched from its disordered into its ordered phase. The numerical results obtained with Monte Carlo simulations show a strong relation between the statistical properties of hull perimeters in the initial state and during coarsening: The statistics and morphology of the structures that are larger than the averaged ones are those of the initial state, while the ones of small structures are determined by the curvature-driven dynamic process. We link the hull properties to the ones of the areas they enclose. We analyze the linear von Neumann-Mullins law, both for individual domains and on the average, concluding that its validity, for the later case, is limited to domains with number of sides around 6, while presenting stronger violations in the former case. © 2012 American Physical Society
NASA Astrophysics Data System (ADS)
Wu, Weiguo; Asai, Take; Akatsuka, Takao
1995-10-01
The measurement of the characteristic parameters for a moving object with deformation is often an important problem. Here, an approach to analyze the shape change of a ball, when it is kicked in soccer, is proposed by using a simple shape deformation model to evaluate the shape change from the image sequence. Moreover, to determine the parameters of the model which apply to actual ball deformation, the detection of ball is necessary, and the pattern spectrum based on morphological operators is considered. Here, we assume that the deformation surface of the ball is a circular arc, when it is kicked by foot, and the arc is always convex when it is observed from the kicking side. To obtain the parameters of the arc, the preprocessing of the ball image such as local binarization, the region filling and noisy smoothing with morphological operators, is performed from actual image sequence. In order to detect the ball, the pattern spectrum with morphological operators is measured, and then circumscribed circle of the ball is extracted. So, the center and radius of the ball from circumscribed circle and the arc of the deformation surface of the model are obtained. Finally, the characteristic parameters of a moving ball such as the deformation are measured by using the shape deformation model. To demonstrate the effect of this method, we show an application to extract the deformation of the ball in football for the actual sports skill training.
Geometrical Model of the Tetragonal BPX Blue Phase
NASA Astrophysics Data System (ADS)
Pansu, B.
1995-04-01
Crystals of BP1 and BP2 blue phases exhibit different crystalline structures under sufficiently high electric field. When the dielectric anisotropy is positive, the same tetragonal phase, called BPX, has been observed when the field is applied, either along a two-fold axis of the BP1 phase, or along a four-fold axis of the BP2 phase. With the help of the geometrical models of cubic blue phases deduced from the analogy with the cubic lyotropic phases, we propose in this paper a geometrical model of the BPX phase and a mechanism for the transformations of BP1 and BP2 into BPX. L'application d'un champ électrique suffisamment intense sur des monocristaux de phases bleues BP1 et BP2 provoque l'apparition de nouvelles structures cristallines. Notamment, une même phase BPX à symétrie tétragonale a été observée quand le champ est dirigé suivant un axe d'ordre 2 de la BP1 ou un axe d'ordre 4 de la BP2, ceci quand l'anisotropie diélectrique est positive. A partir de modèles géométriques des phases bleues basés sur l'analogie avec les phases cubiques lyotropes, nous proposons un modèle géométrique de la phase BPX et un mécanisme de transformation des phases bleues BP1 et BP2 en BPX.
Geometrical Custom Modeling of Human Cornea In Vivo and Its Use for the Diagnosis of Corneal Ectasia
Cavas-Martínez, Francisco; Fernández-Pacheco, Daniel G.; De la Cruz-Sánchez, Ernesto; Nieto Martínez, José; Fernández Cañavate, Francisco J.; Vega-Estrada, Alfredo; Plaza-Puche, Ana B.; Alió, Jorge L.
2014-01-01
Aim To establish a new procedure for 3D geometric reconstruction of the human cornea to obtain a solid model that represents a personalized and in vivo morphology of both the anterior and posterior corneal surfaces. This model is later analyzed to obtain geometric variables enabling the characterization of the corneal geometry and establishing a new clinical diagnostic criterion in order to distinguish between healthy corneas and corneas with keratoconus. Method The method for the geometric reconstruction of the cornea consists of the following steps: capture and preprocessing of the spatial point clouds provided by the Sirius topographer that represent both anterior and posterior corneal surfaces, reconstruction of the corneal geometric surfaces and generation of the solid model. Later, geometric variables are extracted from the model obtained and statistically analyzed to detect deformations of the cornea. Results The variables that achieved the best results in the diagnosis of keratoconus were anterior corneal surface area (ROC area: 0.847, p<0.000, std. error: 0.038, 95% CI: 0.777 to 0.925), posterior corneal surface area (ROC area: 0.807, p<0.000, std. error: 0.042, 95% CI: 0,726 to 0,889), anterior apex deviation (ROC area: 0.735, p<0.000, std. error: 0.053, 95% CI: 0.630 to 0.840) and posterior apex deviation (ROC area: 0.891, p<0.000, std. error: 0.039, 95% CI: 0.8146 to 0.9672). Conclusion Geometric modeling enables accurate characterization of the human cornea. Also, from a clinical point of view, the procedure described has established a new approach for the study of eye-related diseases. PMID:25329896
Real-time deformable models for surgery simulation: a survey.
Meier, U; López, O; Monserrat, C; Juan, M C; Alcañiz, M
2005-03-01
Simulating the behaviour of elastic objects in real time is one of the current objectives of computer graphics. One of its fields of application lies in virtual reality, mainly in surgery simulation systems. In computer graphics, the models used for the construction of objects with deformable behaviour are known as deformable models. These have two conflicting characteristics: interactivity and motion realism. The different deformable models developed to date have promoted only one of these (usually interactivity) to the detriment of the other (biomechanical realism). In this paper, we present a classification of the different deformable models that have been developed. We present the advantages and disadvantages of each one. Finally, we make a comparison of deformable models and perform an evaluation of the state of the art and the future of deformable models.
Eiland, R.B.; Maare, C.; Sjöström, D.; Samsøe, E.; Behrens, C.F.
2014-01-01
The aim of this study was to carry out geometric and dosimetric evaluation of the usefulness of a deformable image registration algorithm utilized for adaptive head-and-neck intensity-modulated radiotherapy. Data consisted of seven patients, each with a planning CT (pCT), a rescanning CT (ReCT) and a cone beam CT (CBCT). The CBCT was acquired on the same day (±1 d) as the ReCT (i.e. at Fraction 17, 18, 23, 24 or 29). The ReCT served as ground truth. A deformed CT (dCT) with structures was created by deforming the pCT to the CBCT. The geometrical comparison was based on the volumes of the deformed, and the manually delineated structures on the ReCT. Likewise, the center of mass shift (CMS) and the Dice similarity coefficient were determined. The dosimetric comparison was performed by recalculating the initial treatment plan on the dCT and the ReCT. Dose–volume histogram (DVH) points and a range of conformity measures were used for the evaluation. We found a significant difference in the median volume of the dCT relative to that of the ReCT. Median CMS values were ∼2–5 mm, except for the spinal cord, where the median CMS was 8 mm. Dosimetric evaluation of target structures revealed small differences, while larger differences were observed for organs at risk. The deformed structures cannot fully replace manually delineated structures. Based on both geometrical and dosimetrical measures, there is a tendency for the dCT to overestimate the need for replanning, compared with the ReCT. PMID:24907340
NASA Astrophysics Data System (ADS)
Saverin, Joseph; Peukert, Juliane; Marten, David; Pechlivanoglou, George; Paschereit, Christian Oliver; Greenblatt, David
2016-09-01
The current paper investigates the aeroelastic modelling of large, flexible multi- MW wind turbine blades. Most current performance prediction tools make use of the Blade Element Momentum (BEM) model, based upon a number of simplifying assumptions that hold only under steady conditions. This is why a lifting line free vortex wake (LLFVW) algorithm is used here to accurately resolve unsteady wind turbine aerodynamics. A coupling to the structural analysis tool BeamDyn, based on geometrically exact beam theory, allows for time-resolved aeroelastic simulations with highly deflected blades including bend-twist, coupling. Predictions of blade loading and deformation for rigid and flexible blades are analysed with reference to different aerodynamic and structural approaches. The emergency shutdown procedure is chosen as an examplary design load case causing large deflections to place emphasis on the influence of structural coupling and demonstrate the necessity of high fidelity structural models.
Videogrammetric Model Deformation Measurement System User's Manual
NASA Technical Reports Server (NTRS)
Dismond, Harriett R.
2002-01-01
The purpose of this manual is to provide the user of the NASA VMD system, running the MDef software, Version 1.10, all information required to operate the system. The NASA Videogrammetric Model Deformation system consists of an automated videogrammetric technique used to measure the change in wing twist and bending under aerodynamic load in a wind tunnel. The basic instrumentation consists of a single CCD video camera and a frame grabber interfaced to a computer. The technique is based upon a single view photogrammetric determination of two-dimensional coordinates of wing targets with fixed (and known) third dimensional coordinate, namely the span-wise location. The major consideration in the development of the measurement system was that productivity must not be appreciably reduced.
Rapid world modeling: Fitting range data to geometric primitives
Feddema, J.; Little, C.
1996-12-31
For the past seven years, Sandia National Laboratories has been active in the development of robotic systems to help remediate DOE`s waste sites and decommissioned facilities. Some of these facilities have high levels of radioactivity which prevent manual clean-up. Tele-operated and autonomous robotic systems have been envisioned as the only suitable means of removing the radioactive elements. World modeling is defined as the process of creating a numerical geometric model of a real world environment or workspace. This model is often used in robotics to plan robot motions which perform a task while avoiding obstacles. In many applications where the world model does not exist ahead of time, structured lighting, laser range finders, and even acoustical sensors have been used to create three dimensional maps of the environment. These maps consist of thousands of range points which are difficult to handle and interpret. This paper presents a least squares technique for fitting range data to planar and quadric surfaces, including cylinders and ellipsoids. Once fit to these primitive surfaces, the amount of data associated with a surface is greatly reduced up to three orders of magnitude, thus allowing for more rapid handling and analysis of world data.
NASA Astrophysics Data System (ADS)
Chang, Shengqian; Liu, Siqi; Yuan, Fei; Zheng, Zhenrong
2017-01-01
Since optical distortion has been a big trouble for various kinds of imaging systems, finding a simple correction method with wide applications is of significant importance. In this paper, we propose a unified and simple correction method, performing well for both photographic and projective imaging systems. The basic idea is regarding the optical distortion as geometrical deformation between the object and image, without considering the specific features of an optical system. First of all, a calibration template is employed to establish the geometrical transformation model (GTM) for the distortion of a built optical system. Two alternative algorithms are given to estimate the GTM in algebraic form. The computation is very simple because no intrinsic parameters of the optical system are needed to establish the GTM. Besides, the errors introduced by the fabricating and assembling process can be eliminated. Then, the corrected image of the photographic system or the pre-distorted image of the projective systems can be obtained accordingly utilizing the GTM. Experiments are conducted to demonstrate the effectiveness of our method with wide applications.
NASA Astrophysics Data System (ADS)
Kashani, Rojano
External beam radiation therapy is an effective method for treating cancer in many body sites. Highly conformal plans can be created to provide good target coverage while sparing the surrounding normal tissue. A fundamental problem in delivering these conformal plans is the inter- and intra-fractional variations in patient geometry, which result in deviation of the delivered dose from the planned dose, thus reducing the probability of tumor control or increasing the risk of normal tissue toxicity. To address this problem, various motion management strategies have been implemented in the clinic, and several others are under investigation. While the technique employed for management of geometric variation can change depending on the type and source of the variation (set up error, respiratory-induced motion and deformation, or tumor shrinkage or tissue loss in response to treatment) as well as other clinical factors, all these techniques have one thing in common and that is the fact that they are not perfect. This work investigates the uncertainties associated with the measurement and management of motion and deformation, and evaluates the impact of these uncertainties on the accuracy of geometry and dose tracking for treatment adaptation. This research quantified the magnitude and distribution of error in deformable image registration for aligning image volumes acquired at different breathing states. It further explored the potential of reducing the registration error in deforming lung geometry, by applying a method from multivariate statistics (principal component analysis) to identify the significant modes of variation in this geometry. It also demonstrated the potential for tracking respiratory induced deformation in various regions in the lung, using a few surrogates such as implanted markers. In addition to the evaluation of registration error for thoracic geometry affected by respiratory motion, this work also investigates the accuracy of deformable image
Phenomenological modeling of nonlinear holograms based on metallic geometric metasurfaces.
Ye, Weimin; Li, Xin; Liu, Juan; Zhang, Shuang
2016-10-31
Benefiting from efficient local phase and amplitude control at the subwavelength scale, metasurfaces offer a new platform for computer generated holography with high spatial resolution. Three-dimensional and high efficient holograms have been realized by metasurfaces constituted by subwavelength meta-atoms with spatially varying geometries or orientations. Metasurfaces have been recently extended to the nonlinear optical regime to generate holographic images in harmonic generation waves. Thus far, there has been no vector field simulation of nonlinear metasurface holograms because of the tremendous computational challenge in numerically calculating the collective nonlinear responses of the large number of different subwavelength meta-atoms in a hologram. Here, we propose a general phenomenological method to model nonlinear metasurface holograms based on the assumption that every meta-atom could be described by a localized nonlinear polarizability tensor. Applied to geometric nonlinear metasurfaces, we numerically model the holographic images formed by the second-harmonic waves of different spins. We show that, in contrast to the metasurface holograms operating in the linear optical regime, the wavelength of incident fundamental light should be slightly detuned from the fundamental resonant wavelength to optimize the efficiency and quality of nonlinear holographic images. The proposed modeling provides a general method to simulate nonlinear optical devices based on metallic metasurfaces.
On the sigma-model of deformed special geometry
NASA Astrophysics Data System (ADS)
Lopes Cardoso, Gabriel; Véliz-Osorio, Alvaro
2013-07-01
We discuss the deformed sigma-model that arises when considering four-dimensional N=2 abelian vector multiplets in the presence of an arbitrary chiral background field. In addition, we allow for a class of deformations of special geometry by non-holomorphic terms. We analyze the geometry of the sigma-model in terms of intrinsic torsion classes. We show that, generically, the deformed geometry is non-Kähler. We illustrate our findings with an example. We also express the deformed sigma-model in terms of the Hesse potential that underlies the real formulation of special geometry.
Deformation methods in modelling of the inner magnetospheric electromagnetic fields
NASA Astrophysics Data System (ADS)
Toivanen, P. K.
2007-12-01
Various deformation methods have been widely used in animation image processing. In common terms, they are mathematical presentations of deformations of an image drawn on an elastic material under stretching or compression of the material. Such a method has also been used in modelling of the magnetospheric magnetic fields, and recently been generalized to include also the electric fields. In this presentations, the theory of the deformation method and an application in a form of a new global magnetospheric electromagnetic field model are previewed. The main focus of the presentation is on the inner magnetospheric current systems and associated electromagnetic fields during quiet and disturbed periods. Finally, a short look at the modern deformation methods in image processing is taken. These methods include the Free Form Deformations and Moving Least Squares Deformations, and their future applications in magnetospheric field modelling are discussed.
NASA Astrophysics Data System (ADS)
Njanko, T.; Chatué, C. Njiki; Kwékam, M.; Nké, B. E. Bella; Sandjo, A. F. Yakeu; Fozing, E. M.
2017-03-01
The Numba ductile deformation zone (NDDZ) is characterised by folds recorded during the three deformation phases that affected the banded amphibole gneiss. Fold-shape analyses using the program Fold Profiler with the aim to show the importance of folding events in the structural analysis of the NDDZ and its contribution to the Pan-African orogeny in central Africa have been made. Classical field method, conic sections method and Ramsay's fold classification method were applied to (i) have the general orientation of folds, (ii) analyze the fold shapes and (iii) classify the geometry of the folded bands. Fold axes in banded amphibole gneiss plunge moderately (<15°) towards the NNE or SSW. The morphology of F1, F2 and F3 folds in the study area clearly points to (i) Z-shape folds with SE vergence and (ii) a dextral sense of shear motion. Conic section method reveals two dominant families: F1 and F3 folds belong to parabolic shape folds, while F2 folds belong to parabolic shape and hyperbolic shape folds. Ramsay's scheme emphasizes class 1C (for F1, F2 and F3 folds) and class 3 (for F2 folds) as main fold classes. The co-existence of the various fold shapes can be explained by (i) the structuration of the banded gneiss, (ii) the folding mechanisms that associate shear with a non-least compressive or flattening component in a ductile shear zone and (iii) the change in rheological properties of the band during the period of fold formation. These data allow us to conclude that the Numba region underwent ductile dextral shear and can be integrated (i) in a correlation model with the Central Cameroon Shear Zone (CCSZ) and associated syn-kinematic intrusions and (ii) into the tectonic model of Pan-African belt of central Africa in Cameroon.
NASA Astrophysics Data System (ADS)
Song, Pengchao
Recent studies of the occurrence of post-flutter limit cycle oscillations (LCO) of the F-16 have provided good support to the long-standing hypothesis that this phenomenon involves a nonlinear structural damping. A potential mechanism for the appearance of nonlinearity in the damping are the nonlinear geometric effects that arise when the deformations become large enough to exceed the linear regime. In this light, the focus of this investigation is first on extending nonlinear reduced order modeling (ROM) methods to include viscoelasticity which is introduced here through a linear Kelvin-Voigt model in the undeformed configuration. Proceeding with a Galerkin approach, the ROM governing equations of motion are obtained and are found to be of a generalized van der Pol-Duffing form with parameters depending on the structure and the chosen basis functions. An identification approach of the nonlinear damping parameters is next proposed which is applicable to structures modeled within commercial finite element software. The effects of this nonlinear damping mechanism on the post-flutter response is next analyzed on the Goland wing through time-marching of the aeroelastic equations comprising a rational fraction approximation of the linear aerodynamic forces. It is indeed found that the nonlinearity in the damping can stabilize the unstable aerodynamics and lead to finite amplitude limit cycle oscillations even when the stiffness related nonlinear geometric effects are neglected. The incorporation of these latter effects in the model is found to further decrease the amplitude of LCO even though the dominant bending motions do not seem to stiffen as the level of displacements is increased in static analyses.
Beta Functions in Chirally Deformed Supersymmetric Sigma Models in Two Dimensions
NASA Astrophysics Data System (ADS)
Vainshtein, Arkady
We study two-dimensional sigma models where the chiral deformation diminished the original 𝒩 =(2, 2) supersymmetry to the chiral one, 𝒩 =(0, 2). Such heterotic models were discovered previously on the world sheet of non-Abelian stringy solitons supported by certain four-dimensional 𝒩 = 1 theories. We study geometric aspects and holomorphic properties of these models, and derive a number of exact expressions for the β functions in terms of the anomalous dimensions analogous to the NSVZ β function in four-dimensional Yang-Mills. Instanton calculus provides a straightforward method for the derivation.
Beta functions in Chirally deformed supersymmetric sigma models in two dimensions
NASA Astrophysics Data System (ADS)
Vainshtein, Arkady
2016-10-01
We study two-dimensional sigma models where the chiral deformation diminished the original 𝒩 = (2, 2) supersymmetry to the chiral one, 𝒩 = (0, 2). Such heterotic models were discovered previously on the world sheet of non-Abelian stringy solitons supported by certain four-dimensional 𝒩 = 1 theories. We study geometric aspects and holomorphic properties of these models, and derive a number of exact expressions for the β functions in terms of the anomalous dimensions analogous to the NSVZ β function in four-dimensional Yang-Mills. Instanton calculus provides a straightforward method for the derivation.
Content-Based Search on a Database of Geometric Models: Identifying Objects of Similar Shape
XAVIER, PATRICK G.; HENRY, TYSON R.; LAFARGE, ROBERT A.; MEIRANS, LILITA; RAY, LAWRENCE P.
2001-11-01
The Geometric Search Engine is a software system for storing and searching a database of geometric models. The database maybe searched for modeled objects similar in shape to a target model supplied by the user. The database models are generally from CAD models while the target model may be either a CAD model or a model generated from range data collected from a physical object. This document describes key generation, database layout, and search of the database.
Blanc-Benon, Philippe; Lipkens, Bart; Dallois, Laurent; Hamilton, Mark F; Blackstock, David T
2002-01-01
Sonic boom propagation can be affected by atmospheric turbulence. It has been shown that turbulence affects the perceived loudness of sonic booms, mainly by changing its peak pressure and rise time. The models reported here describe the nonlinear propagation of sound through turbulence. Turbulence is modeled as a set of individual realizations of a random temperature or velocity field. In the first model, linear geometrical acoustics is used to trace rays through each realization of the turbulent field. A nonlinear transport equation is then derived along each eigenray connecting the source and receiver. The transport equation is solved by a Pestorius algorithm. In the second model, the KZK equation is modified to account for the effect of a random temperature field and it is then solved numerically. Results from numerical experiments that simulate the propagation of spark-produced N waves through turbulence are presented. It is observed that turbulence decreases, on average, the peak pressure of the N waves and increases the rise time. Nonlinear distortion is less when turbulence is present than without it. The effects of random vector fields are stronger than those of random temperature fields. The location of the caustics and the deformation of the wave front are also presented. These observations confirm the results from the model experiment in which spark-produced N waves are used to simulate sonic boom propagation through a turbulent atmosphere.
Modelling the deformation and collapse of a weak snow layer
NASA Astrophysics Data System (ADS)
Mede, Tijan; Chambon, Guillaume; Hagenmuller, Pascal; Nicot, François
2017-04-01
Weak snow layers are thin layers of low cohesion and density, naturally occurring in the snowpack. The understanding of their mechanical behaviour is considered to be of great importance as they are believed to have a decisive effect on dry slab avalanche releases. These layers can be viewed as porous structures of sintered ice grains that collapse under loading, withdrawing support to the overlaying slab layer of snow. Field observations show that weak layers are usually formed by very distinct snow types and microstructures. The extremely fragile nature of these layers makes systematic laboratory experiments notoriously difficult. Here, to investigate the mechanical response of a weak layer under loading, we perform numerical experiments based on the actual microstructure of snow. The simulations are based on a discrete element model (DEM) of the weak layer that utilizes X-ray tomographical images of snow structure as input information. Individual grains are identified in the binary image of the snow matrix and then represented in the DEM model by a computation-efficient approximation based on sets of spheres. A medial axis-based algorithm has been developed in order to obtain a chosen level of grain shape approximation with the minimum number of spherical discrete elements. The optimal level of grain approximation is determined through a sensitivity analysis of different geometrical measures of grain shape to the approximating parameters. Thereby, an optimal balance can be found between computational efficiency and accuracy of the developed DEM model. Finally, by accounting for the fragile cohesion between individual grains of the snow matrix, the model gains ability to follow the material through different stages of deformation - from a porous network of sintered grains to the final stage of a decomposed granular material. The model is applied to multiple snow samples to reveal the effect of microstructure on the macroscopic mechanical response of snow. The
Single-View Food Portion Estimation Based on Geometric Models
Fang, Shaobo; Liu, Chang; Zhu, Fengqing; Delp, Edward J.; Boushey, Carol J.
2016-01-01
In this paper we present a food portion estimation technique based on a single-view food image used for the estimation of the amount of energy (in kilocalories) consumed at a meal. Unlike previous methods we have developed, the new technique is capable of estimating food portion without manual tuning of parameters. Although single-view 3D scene reconstruction is in general an ill-posed problem, the use of geometric models such as the shape of a container can help to partially recover 3D parameters of food items in the scene. Based on the estimated 3D parameters of each food item and a reference object in the scene, the volume of each food item in the image can be determined. The weight of each food can then be estimated using the density of the food item. We were able to achieve an error of less than 6% for energy estimation of an image of a meal assuming accurate segmentation and food classification. PMID:27672682
dMODELS: A software package for modeling volcanic deformation
NASA Astrophysics Data System (ADS)
Battaglia, M.
2013-12-01
dMODELS is software package including the most common source models used to interpret deformation measurements near active volcanic centers. The emphasis is on estimating the parameters of analytical models of deformation by inverting data from the Global Positioning System (GPS), InSAR, tiltmeters and strainmeters. Source models include: (a) pressurized spherical, ellipsoidal and sill-like magma chambers in an elastic, homogeneous, flat half-space; and (b) pressurized spherical magma chamber with correction for the effect of topography (i.e., Williams and Wadge, 1998). All the expressions have been extended to include deformation and strain within the Earth's crust (as opposed to only the Earth's surface) and verified against finite element models. The software has been developed using Matlab but compiled versions that can be run using the free Matlab Compiler Runtime (MCR) are available for Linux, and Windows 7 (32bit and 64bit). The MATLAB scripts and compiled files are open source and intended for teaching and research. The software can be downloaded from the USGS web site pubs.usgs.gov/tm/13/b1/. Please e-mail the author at mbattaglia@usgs.gov if you would like to be included in the dMODELS mail list to get information about the release of software updates.
A deformable model for hippocampus segmentation: Improvements and extension to 3D
Ghanei, A.; Soltanian-Zadeh, H. |; Windham, J.P.
1996-12-31
In this work, the application of a deformable model to the segmentation of hippocampus in brain MRI has been investigated. Common problems of the model in this case and similar cases have been discussed and solved. A new method for extracting discontinuous boundaries of an object with multiple unwanted edges has been developed. This method is based on detecting and following the edge by external forces. For improving the contour stability, its movement has been limited. Also, adaptive values for internal force weights have been used. In the next step, the model has been extended to 3D which is a Deformable Surface Model. A geometric structure used for this purpose. This helps in definition of normal vectors and internal forces. Finally, a method for generating the initial volume from individual initial polygons has been developed.
NASA Technical Reports Server (NTRS)
Strahler, Alan H.; Jupp, David L. B.
1990-01-01
Geometric-optical discrete-element mathematical models for forest canopies have been developed using the Boolean logic and models of Serra. The geometric-optical approach is considered to be particularly well suited to describing the bidirectional reflectance of forest woodland canopies, where the concentration of leaf material within crowns and the resulting between-tree gaps make plane-parallel, radiative-transfer models inappropriate. The approach leads to invertible formulations, in which the spatial and directional variance provides the means for remote estimation of tree crown size, shape, and total cover from remotedly sensed imagery.
Jordanian deformation of the open sℓ(2) Gaudin model
NASA Astrophysics Data System (ADS)
António, N. Cirilo; Manojlović, N.; Nagy, Z.
2014-04-01
We derive a deformed sℓ( 2) Gaudin model with integrable boundaries. Starting from the Jordanian deformation of the SL( 2)-invariant Yang R-matrix and generic solutions of the associated reflection equation and the dual reflection equation, we obtain the corresponding inhomogeneous spin- 1/2 XXX chain. The semiclassical expansion of the transfer matrix yields the deformed sℓ( 2) Gaudin Hamiltonians with boundary terms.
Geometric Modeling Using Both Active And Passive Sensing
NASA Astrophysics Data System (ADS)
Wang, Y. F.; Aggarwal, J. K.
1989-01-01
In this paper, we introduce a new algorithm for modeling the structure of 3-D objects from multiple viewing directions using an integration of active and passive sensing. Construction of the structural description of a 3-D object is composed of two stages: (i) The surface orientation and partial structure are first inferred from a set of single views, and (ii) the visible surface structures inferred from different viewpoints are integrated to complete the description of the 3-D object. In the first stage, an active stripe coding technique is used for recovering visible surface orientation and partial structure. In the second stage, an iterative construction/refinement scheme is used which exploits both passive and active sensing for representing the object surfaces. The active sensing technique projects spatially modulated light patterns to encode the object surfaces for analysis. The visible surface orientation is inferred using a constraint satisfaction process based upon the observed orientation of the projected patterns. The visible surface structure is recovered by integrating a dense orientation map. For multiple view integration, the bounding volume description of the imaged object is first constructed using multiple occluding contours which are acquired through passive sensing. The bounding volume description is then refined using the partial surface structures inferred from active sensing. The final surface structure is recorded in a data structure where the surface contours in a set of parallel planar cross sections are stored. The system construction is inexpensive and the algorithms introduced are adaptive, versatile and suitable for applications in dynamic environments. We expect this approach to be widely applicable in the field of robotics, geometric modeling and factory automation.
Deformation modeling and constitutive modeling for anisotropic superalloys
NASA Technical Reports Server (NTRS)
Milligan, Walter W.; Antolovich, Stephen D.
1989-01-01
A study of deformation mechanisms in the single crystal superalloy PWA 1480 was conducted. Monotonic and cyclic tests were conducted from 20 to 1093 C. Both (001) and near-(123) crystals were tested, at strain rates of 0.5 and 50 percent/minute. The deformation behavior could be grouped into two temperature regimes: low temperatures, below 760 C; and high temperatures, above 820 to 950 C depending on the strain rate. At low temperatures, the mechanical behavior was very anisotropic. An orientation dependent CRSS, a tension-compression asymmetry, and anisotropic strain hardening were all observed. The material was deformed by planar octahedral slip. The anisotropic properties were correlated with the ease of cube cross-slip, as well as the number of active slip systems. At high temperatures, the material was isotropic, and deformed by homogeneous gamma by-pass. It was found that the temperature dependence of the formation of superlattice-intrinsic stacking faults was responsible for the local minimum in the CRSS of this alloy at 400 C. It was proposed that the cube cross-slip process must be reversible. This was used to explain the reversible tension-compression asymmetry, and was used to study models of cross-slip. As a result, the cross-slip model proposed by Paidar, Pope and Vitek was found to be consistent with the proposed slip reversibility. The results were related to anisotropic viscoplastic constitutive models. The model proposed by Walter and Jordan was found to be capable of modeling all aspects of the material anisotropy. Temperature and strain rate boundaries for the model were proposed, and guidelines for numerical experiments were proposed.
HSR Model Deformation Measurements from Subsonic to Supersonic Speeds
NASA Technical Reports Server (NTRS)
Burner, A. W.; Erickson, G. E.; Goodman, W. L.; Fleming, G. A.
1999-01-01
This paper describes the video model deformation technique (VMD) used at five NASA facilities and the projection moire interferometry (PMI) technique used at two NASA facilities. Comparisons between the two techniques for model deformation measurements are provided. Facilities at NASA-Ames and NASA-Langley where deformation measurements have been made are presented. Examples of HSR model deformation measurements from the Langley Unitary Wind Tunnel, Langley 16-foot Transonic Wind Tunnel, and the Ames 12-foot Pressure Tunnel are presented. A study to improve and develop new targeting schemes at the National Transonic Facility is also described. The consideration of milled targets for future HSR models is recommended when deformation measurements are expected to be required. Finally, future development work for VMD and PMI is addressed.
Dahmen, Karin A.; Ben-Zion, Yehuda; Uhl, Jonathan T.
2009-05-01
A basic micromechanical model for deformation of solids with only one tuning parameter (weakening {epsilon}) is introduced. The model can reproduce observed stress-strain curves, acoustic emissions and related power spectra, event statistics, and geometrical properties of slip, with a continuous phase transition from brittle to ductile behavior. Exact universal predictions are extracted using mean field theory and renormalization group tools. The results agree with recent experimental observations and simulations of related models for dislocation dynamics, material damage, and earthquake statistics.
Dahmen, Karin A; Ben-Zion, Yehuda; Uhl, Jonathan T
2009-05-01
A basic micromechanical model for deformation of solids with only one tuning parameter (weakening epsilon) is introduced. The model can reproduce observed stress-strain curves, acoustic emissions and related power spectra, event statistics, and geometrical properties of slip, with a continuous phase transition from brittle to ductile behavior. Exact universal predictions are extracted using mean field theory and renormalization group tools. The results agree with recent experimental observations and simulations of related models for dislocation dynamics, material damage, and earthquake statistics.
Interplay of Aging and Hypertension in Cardiac Remodeling: A Mathematical Geometric Model
Tsai, Meng-Hang; Tsai, Wei-Chuan
2016-01-01
Hypertensive disorder can cause cardiac deformities. Elastic characteristic parameters, like Young’s modulus of elasticity (E) derived from a traditional cylindrical model, increase significantly with aging. However, the geometric and component changes of aging hearts because of chronic hypertension remain unknown. To better describe the effects, we propose an elliptical elastic and mathematical model to evaluate myocardial stiffness. Ninety-six hypertensive patients (HTNPos) (men: 59.3%; age ≥ 65 years: 20.8%) were enrolled and compared with normotensive controls (HTNNeg) (n = 47, 48.9%). HTNPos patients had a thicker interventricular septum in diastole (IVSd) (HTNPos: 0.96 ± 0.21 cm vs. HTNNeg: 0.77 ± 0.15; p = 0.005) and higher intracardiac pressure (e/e′: 9.06 ± 4.85 cm vs. 7.76 ± 3.41; p = 0.01), especially the elderly (> 65 years) (IVSd: 1.03 ± 0.19 cm, e/e′: 11.39 ± 1.99; p = 0.006 and 0.01, respectively). Nevertheless, the internal dimension decreased more significantly in the HTNPos rather than in the HTNNeg elderly (5.23 ± 0.46 vs. 4.74 ± 0.69 cm; p = 0.02). We found different directions of cardiac remodeling with normotensive and hypertensive loads. Different from the longitudinal and circumferential strain, E and Poisson’s ratio (υ) are values that directly present the rigidity of myocardium. E was significantly higher in the elderly (8011.92 ± 2431.85 vs. 6052.43 ± 3121.50; p = 0.02), whereas υ was significantly higher in all HTNPos patients (0.73 ± 0.12 vs. 0.61 ± 0.07; p < 0.001). Because E and υ reflected the material changes of myocardium in the HTNPos elderly, the proposed elliptical mathematical heart model better describes the geometric deformity induced by aging and hypertension. PMID:27977729
Preliminary deformation model for National Seismic Hazard map of Indonesia
Meilano, Irwan; Gunawan, Endra; Sarsito, Dina; Prijatna, Kosasih; Abidin, Hasanuddin Z.; Susilo,; Efendi, Joni
2015-04-24
Preliminary deformation model for the Indonesia’s National Seismic Hazard (NSH) map is constructed as the block rotation and strain accumulation function at the elastic half-space. Deformation due to rigid body motion is estimated by rotating six tectonic blocks in Indonesia. The interseismic deformation due to subduction is estimated by assuming coupling on subduction interface while deformation at active fault is calculated by assuming each of the fault‘s segment slips beneath a locking depth or in combination with creeping in a shallower part. This research shows that rigid body motion dominates the deformation pattern with magnitude more than 15 mm/year, except in the narrow area near subduction zones and active faults where significant deformation reach to 25 mm/year.
Emergent lattices with geometrical frustration in doped extended Hubbard models
NASA Astrophysics Data System (ADS)
Kaneko, Ryui; Tocchio, Luca F.; Valentí, Roser; Gros, Claudius
2016-11-01
Spontaneous charge ordering occurring in correlated systems may be considered as a possible route to generate effective lattice structures with unconventional couplings. For this purpose we investigate the phase diagram of doped extended Hubbard models on two lattices: (i) the honeycomb lattice with on-site U and nearest-neighbor V Coulomb interactions at 3 /4 filling (n =3 /2 ) and (ii) the triangular lattice with on-site U , nearest-neighbor V , and next-nearest-neighbor V' Coulomb interactions at 3 /8 filling (n =3 /4 ). We consider various approaches including mean-field approximations, perturbation theory, and variational Monte Carlo. For the honeycomb case (i), charge order induces an effective triangular lattice at large values of U /t and V /t , where t is the nearest-neighbor hopping integral. The nearest-neighbor spin exchange interactions on this effective triangular lattice are antiferromagnetic in most of the phase diagram, while they become ferromagnetic when U is much larger than V . At U /t ˜(V/t ) 3 , ferromagnetic and antiferromagnetic exchange interactions nearly cancel out, leading to a system with four-spin ring-exchange interactions. On the other hand, for the triangular case (ii) at large U and finite V', we find no charge order for small V , an effective kagome lattice for intermediate V , and one-dimensional charge order for large V . These results indicate that Coulomb interactions induce [case (i)] or enhance [case(ii)] emergent geometrical frustration of the spin degrees of freedom in the system, by forming charge order.
Geometric modeling and analysis of large latticed surfaces
NASA Technical Reports Server (NTRS)
Nayfeh, A. H.; Hefzy, M. S.
1980-01-01
The application of geometrical schemes, similar to geodesic domes, to large spherical antenna reflectors was investigated. The shape and size of flat segmented latticed surfaces which approximate general shells of revolution, and in particular spherical and paraboloidal reflective surfaces, were determined. The extensive mathematical and computational geometric analyses of the reflector resulted in the development of a general purpose computer program capable of generating the complete design parameters of the dish. The program also includes a graphical self contained subroutine for graphic display of the required design.
Modeling the effects of particle deformation in chemical mechanical polishing
NASA Astrophysics Data System (ADS)
Chen, Xiaochun; Zhao, Yongwu; Wang, Yongguang
2012-09-01
In a chemical mechanical polishing (CMP) process, an active abrasive particle participating in the wear process will contact the pad and the wafer at the same time. The applied polishing load causes the deformation of the pad in the contact interface of the particle and the pad, and the deformation of the wafer in the contact interface of the particle and the wafer. Besides, this force causes the deformation of the abrasive particle. Based on the elastic-plastic micro-contact mechanics and abrasive wear theory, a novel model for material removal rate (MRR) with consideration of the abrasive particle deformation is presented in this paper. The deformation of the abrasive particle, affecting the indentation depth of the particle into the wafer, is quantitatively incorporated into the model. The results and analyses show that the present model is in good agreement with the experimental data.
Robust Shape Estimation with Deformable Models
NASA Astrophysics Data System (ADS)
Marques, Jorge S.; Nascimento, Jacinto C.; Abrantes, Arnaldo J.; Silveira, Margarida
This paper addresses the estimation of 2D object boundary from noisy data, using deformable contours. First, it discusses the relationship between deformable contours and other Pattern Recognition algorithms (e.g., Kohonen maps, mean shift, fuzzy c-means) and derives a unified framework which allows a joint formulation for a wide set of methods. Afterwords, the paper addresses the estimation of deformable curves in cluttered images, assuming that there is a large number of outlier features detected in the image. The paper presents two robust algorithms: the adaptive snake for static objects and a robust tracker (S-PDAF) for moving objects in video sequences. The advantages of both algorithms with respect to classic methods are illustrated by examples.
Localised vs distributed deformation: 3D modelling of the Dead Sea region
NASA Astrophysics Data System (ADS)
Devès, M. H.; King, G. C.; Klinger, Y.; Agnon, A.
2012-12-01
The lithosphere behaves as strain softening elasto-plastic materials. In the laboratory, such materials are known to deform in a brittle or a ductile manner depending on the applied geometric boundary conditions. In the lithosphere however, the importance of boundary conditions in controlling the deformation style has been largely ignored. Under general boundary conditions, both laboratory and field observations show that only part of the deformation can localise on through going faults while the rest must remain distributed in process zones where spatially varying shear directions inhibit localisation. Conventional modelling methods use rheologies deduced from laboratory experiments that are not constrained as a function of the geometry of the applied boundary conditions. We propose an alternative modelling method based on the use of an appropriate distribution of dislocation sources to create the deformation field. This approach, because it does not rely on integrating differential equations from more or less well-constrained boundary conditions, does not require making assumptions on the parameters controlling the level and distribution of stresses within the lithosphere. It only supposes that strain accumulates linearly away from the dislocation singularities satisfying the compatibility equations. We verify that this model explains important and hitherto unexplained features of the topography of the Dead Sea region. Following the idea that strain can only localise under specific conditions as inferred from laboratory and field scale observations, we use our model of deformation to predict where deformation can localise and where it has to remain distributed. We find that 65% of the deformation in the Dead Sea region can localise on kinematically stable through-going strike-slip faults while the remaining 35% must remain distributed. Observations suggest that distributed deformation occurs at stress levels that can be ten times greater than that associated with
Li, Min; Castillo, Edward; Zheng, Xiao-Lin; Luo, Hong-Yan; Castillo, Richard; Wu, Yi; Guerrero, Thomas
2013-01-01
Purpose: Respiratory motion introduces uncertainties in tumor location and lung deformation, which often results in difficulties calculating dose distributions in thoracic radiation therapy. Deformable image registration (DIR) has ability to describe respiratory-induced lung deformation, with which the radiotherapy techniques can deliver high dose to tumors while reducing radiation in surrounding normal tissue. The authors' goal is to propose a DIR method to overcome two main challenges of the previous biomechanical model for lung deformation, i.e., the requirement of precise boundary conditions and the lack of elasticity distribution. Methods: As opposed to typical methods in biomechanical modeling, the authors' method assumes that lung tissue is inhomogeneous. The authors thus propose a DIR method combining a varying intensity flow (VF) block-matching algorithm with the finite element method (FEM) for lung deformation from end-expiratory phase to end-inspiratory phase. Specifically, the lung deformation is formulated as a stress–strain problem, for which the boundary conditions are obtained from the VF block-matching algorithm and the element specific Young's modulus distribution is estimated by solving an optimization problem with a quasi-Newton method. The authors measure the spatial accuracy of their nonuniform model as well as a standard uniform model by applying both methods to four-dimensional computed tomography images of six patients. The spatial errors produced by the registrations are computed using large numbers (>1000) of expert-determined landmark point pairs. Results: In right-left, anterior–posterior, and superior–inferior directions, the mean errors (standard deviation) produced by the standard uniform FEM model are 1.42(1.42), 1.06(1.05), and 1.98(2.10) mm whereas the authors' proposed nonuniform model reduces these errors to 0.59(0.61), 0.52(0.51), and 0.78(0.89) mm. The overall 3D mean errors are 3.05(2.36) and 1.30(0.97) mm for the
Modeling of Surface Geometric Structure State After Integratedformed Milling and Finish Burnishing
NASA Astrophysics Data System (ADS)
Berczyński, Stefan; Grochała, Daniel; Grządziel, Zenon
2017-06-01
The article deals with computer-based modeling of burnishing a surface previously milled with a spherical cutter. This method of milling leaves traces, mainly asperities caused by the cutting crossfeed and cutter diameter. The burnishing process - surface plastic treatment - is accompanied by phenomena that take place right in the burnishing ball-milled surface contact zone. The authors present the method for preparing a finite element model and the methodology of tests for the assessment of height parameters of a surface geometrical structure (SGS). In the physical model the workpieces had a cuboidal shape and these dimensions: (width × height × length) 2×1×4.5 mm. As in the process of burnishing a cuboidal workpiece is affected by plastic deformations, the nonlinearities of the milled item were taken into account. The physical model of the process assumed that the burnishing ball would be rolled perpendicularly to milling cutter linear traces. The model tests included the application of three different burnishing forces: 250 N, 500 N and 1000 N. The process modeling featured the contact and pressing of a ball into the workpiece surface till the desired force was attained, then the burnishing ball was rolled along the surface section of 2 mm, and the burnishing force was gradually reduced till the ball left the contact zone. While rolling, the burnishing ball turned by a 23° angle. The cumulative diagrams depict plastic deformations of the modeled surfaces after milling and burnishing with defined force values. The roughness of idealized milled surface was calculated for the physical model under consideration, i.e. in an elementary section between profile peaks spaced at intervals of crossfeed passes, where the milling feed fwm = 0.5 mm. Also, asperities after burnishing were calculated for the same section. The differences of the obtained values fall below 20% of mean values recorded during empirical experiments. The adopted simplification in after
dMODELS: A software package for modeling volcanic deformation
NASA Astrophysics Data System (ADS)
Battaglia, Maurizio
2017-04-01
dMODELS is a software package that includes the most common source models used to interpret deformation measurements near active volcanic centers. The emphasis is on estimating the parameters of analytical models of deformation by inverting data from the Global Positioning System (GPS), Interferometric Synthetic Aperture Radar (InSAR), tiltmeters and strainmeters. Source models include: (a) pressurized spherical, ellipsoidal and sill-like magma chambers in an elastic, homogeneous, flat half-space; (b) pressurized spherical magma chambers with topography corrections; and (c) the solutions for a dislocation (fracture) in an elastic, homogeneous, flat half-space. All of the equations have been extended to include deformation and strain within the Earth's crust (as opposed to only at the Earth's surface) and verified against finite element models. Although actual volcanic sources are not embedded cavities of simple shape, we assume that these models may reproduce the stress field created by the actual magma intrusion or hydrothermal fluid injection. The dMODELS software employs a nonlinear inversion algorithm to determine the best-fit parameters for the deformation source by searching for the minimum of the cost function χv2 (chi square per degrees of freedom). The non-linear inversion algorithm is a combination of local optimization (interior-point method) and random search. This approach is more efficient for hyper-parameter optimization than trials on a grid. The software has been developed using MATLAB, but compiled versions that can be run using the free MATLAB Compiler Runtime (MCR) module are available for Windows 64-bit operating systems. The MATLAB scripts and compiled files are open source and intended for teaching and research. The software package includes both functions for forward modeling and scripts for data inversion. A software demonstration will be available during the meeting. You are welcome to contact the author at mbattaglia@usgs.gov for
NASA Astrophysics Data System (ADS)
Devès, Maud; King, Geoffrey C. P.; Klinger, Yann; Agnon, Amotz
2011-08-01
The Earth's lithosphere behaves as a strain softening elasto-plastic material. In the laboratory, such materials are known to deform in a brittle or a ductile manner depending on the applied geometric boundary conditions. In the lithosphere however, the importance of boundary conditions in controlling the deformation style has been largely ignored. Under general boundary conditions, both laboratory and field scale observations show that only part of the deformation can localise on through going faults while the rest must remain distributed in 'process zones' where spatially varying shear directions inhibit localisation. Conventional modelling methods (finite difference, finite or discrete elements) use rheologies deduced from laboratory experiments that are not constrained as a function of the geometry of the applied boundary conditions. In this paper, we propose an alternative modelling method that is based on the use of an appropriate distribution of dislocation sources to create the deformation field. This approach, because it does not rely on integrating differential equations from more or less well-constrained boundary conditions, does not require making assumptions on the parameters controlling the level and distribution of stresses within the lithosphere. It only supposes that strain accumulates linearly away from the dislocation singularities satisfying the compatibility equations. We verify that this model explains important and hitherto unexplained features of the topography of the Dead Sea region. Following the idea that strain can only localise under specific conditions as inferred from laboratory and field scale observations, we use our model of deformation to predict where deformation can localise and where it has to remain distributed. We find that ~ 65% of the deformation in the Dead Sea region can localise on kinematically stable through-going strike-slip faults while the remaining ~ 35% has to remain distributed. Observations suggest that
NASA Astrophysics Data System (ADS)
Goren, L.; Castelltort, S.; Klinger, Y.
2014-12-01
The Dead Sea Fault System changes its orientation across Lebanon and forms a restraining bend. The oblique deformation along the Lebanese restraining bend is characterized by a complex suite of tectonic structures, among which, the Yammouneh Fault (YF), is believed to be the main strand that relays deformation from the southern section to the northern section of the Dead Sea Fault System. However, uncertainties regarding slip rates and strain partitioning in Lebanon still prevail. Here, we use morphometric analysis together with analytical and numerical models to constrain rates and modes of distributed and localized deformation along the Lebanese restraining bend.The rivers that drain the western flank of Mount Lebanon show a consistent counterclockwise rotation with respect to an expected orogen perpendicular orientation. Moreover, a pattern of divide disequilibrium in between these rivers emerges from an application of the χ mapping technique, which aims at estimating the degree of geometrical and topological disequilibrium in river networks. These geometrical patterns are compatible with simulation results using a landscape evolution model, which imposes a distributed velocity field along a domain that represents the western flank of Mount Lebanon. We further develop an analytical model that relates the river orientation to a set of kinematic parameters that represents a combined pure and simple shear strain field, and we find the parameters that best explain the present orientation of the western Lebanon rivers. Our results indicate that distributed deformation to the west of the YF takes as much as 30% of the relative Arabia-Sinai plate velocity since the late Miocene, and that the average slip rate along the YF during the same time interval has been 3.8-4.4 mm/yr. The theoretical model can further explain the inferred rotation from Paleomagnetic measurements.
Modeling Steady Acoustic Fields Bounded in Cavities with Geometrical Imperfections
NASA Astrophysics Data System (ADS)
Albo, P. A. Giuliano; Gavioso, R. M.; Benedetto, G.
2010-07-01
A mathematical method is derived within the framework of classical Lagrangian field theory, which is suitable for the determination of the eigenstates of acoustic resonators of nearly spherical shape. The method is based on the expansion of the Helmholtz differential operator and the boundary condition in a power series of a small geometrical perturbation parameter {ɛ} . The method extends to orders higher than {ɛ^2} the calculation of the perturbed acoustic eigenvalues, which was previously limited by the use of variational formalism and the methods of Morse and Ingard. A specific example is worked out for radial modes of a prolate spheroid, with the frequency perturbation calculated to order {ɛ^3} . A possible strategy to tackle the problem of calculating the acoustic eigenvalues for cavities presenting non-smooth geometrical imperfections is also described.
NASA Astrophysics Data System (ADS)
Morita, S.; Yasuda, H.; Nagira, T.; Gourlay, C. M.; Yoshiya, M.; Sugiyama, A.
2012-07-01
In-situ observation was carried out to observe deformation of semi-solid Fe-2mass%C steel with 65% solid and globular morphology by X-ray radiography. Deformation was predominantly controlled by the rearrangement of globules. The solid particles were pushed into each other and rearrangement caused lower solid fraction regions to form. On the basis of the observation, a macroscopic model that introduces a normal stress acting on the solid due to collisions and rearrangement is proposed. The solid particles are treated as a non-Newtonian fluid. The stiffness parameters, which characterize the flow of the solid, are introduced. Stability of semisolid to fluctuations in solid fraction during simple shear was analysed. Shear deformation can be stably localized in the semisolid with a certain solid fraction range. The model essentially reproduces band segregation formation.
Patient-specific model of brain deformation: application to medical image registration.
Wittek, Adam; Miller, Karol; Kikinis, Ron; Warfield, Simon K
2007-01-01
This contribution presents finite element computation of the deformation field within the brain during craniotomy-induced brain shift. The results were used to illustrate the capabilities of non-linear (i.e. accounting for both geometric and material non-linearities) finite element analysis in non-rigid registration of pre- and intra-operative magnetic resonance images of the brain. We used patient-specific hexahedron-dominant finite element mesh, together with realistic material properties for the brain tissue and appropriate contact conditions at boundaries. The model was loaded by the enforced motion of nodes (i.e. through prescribed motion of a boundary) at the brain surface in the craniotomy area. We suggest using explicit time-integration scheme for discretised equations of motion, as the computational times are much shorter and accuracy, for practical purposes, the same as in the case of implicit integration schemes. Application of the computed deformation field to register (i.e. align) the pre-operative images with the intra-operative ones indicated that the model very accurately predicts the displacements of the tumour and the lateral ventricles even for limited information about the brain surface deformation. The prediction accuracy improves when information about deformation of not only exposed (during craniotomy) but also unexposed parts of the brain surface is used when prescribing loading. However, it appears that the accuracy achieved using information only about the deformation of the exposed surface, that can be determined without intra-operative imaging, is acceptable. The presented results show that non-linear biomechanical models can complement medical image processing techniques when conducting non-rigid registration. Important advantage of such models over the previously used linear ones is that they do not require unrealistic assumptions that brain deformations are infinitesimally small and brain stress-strain relationship is linear.
A Phase-field Model for Deformation Twinning
Heo, Tae Wook; Wang, Yi; Bhattacharya, Saswata; Sun, Xin; Hu, Shenyang Y.; Chen, Long-Qing
2011-02-01
We propose a phase-field model for modeling microstructure evolution during deformation twinning. Using a face-centered cubic aluminum as an example, the deformation energy as a function of shear strain is obtained using first-principle calculations. The gradient energy coefficients are fitted to the twin boundary energies and to the dislocation core energies. The elastic energy of twinned structures is included using the Khachaturyan’s elasticity theory. We simulated the twinning process under a number of fixed deformation magnitudes and predicted the microstructures.
Treatment of geometric singularities in implicit solvent models
NASA Astrophysics Data System (ADS)
Yu, Sining; Geng, Weihua; Wei, G. W.
2007-06-01
Geometric singularities, such as cusps and self-intersecting surfaces, are major obstacles to the accuracy, convergence, and stability of the numerical solution of the Poisson-Boltzmann (PB) equation. In earlier work, an interface technique based PB solver was developed using the matched interface and boundary (MIB) method, which explicitly enforces the flux jump condition at the solvent-solute interfaces and leads to highly accurate biomolecular electrostatics in continuum electric environments. However, such a PB solver, denoted as MIBPB-I, cannot maintain the designed second order convergence whenever there are geometric singularities, such as cusps and self-intersecting surfaces. Moreover, the matrix of the MIBPB-I is not optimally symmetrical, resulting in the convergence difficulty. The present work presents a new interface method based PB solver, denoted as MIBPB-II, to address the aforementioned problems. The present MIBPB-II solver is systematical and robust in treating geometric singularities and delivers second order convergence for arbitrarily complex molecular surfaces of proteins. A new procedure is introduced to make the MIBPB-II matrix optimally symmetrical and diagonally dominant. The MIBPB-II solver is extensively validated by the molecular surfaces of few-atom systems and a set of 24 proteins. Converged electrostatic potentials and solvation free energies are obtained at a coarse grid spacing of 0.5Å and are considerably more accurate than those obtained by the PBEQ and the APBS at finer grid spacings.
Generation of deformation twins in nanocrystalline metals: Theoretical model
Gutkin, M. Yu.; Ovid'ko, I. A.; Skiba, N. V.
2006-11-01
A theoretical model is suggested that describes the generation of deformation twins at grain boundaries in nanocrystalline metals. Within the model, a thick twin lamella in a nanoscale grain is generated due to stress-driven emission of twinning dislocations from a grain boundary. The lamella consists of overlapping stacking faults. The results account for experimental data on observation of deformation twins in nanocrystalline Al and Cu reported in the literature.
NASA Astrophysics Data System (ADS)
Devès, M.; King, G. C. P.; Klinger, Y.; Agnon, A.
2012-04-01
The Earth's lithosphere behaves as a strain softening elasto-plastic material. In the laboratory, such materials are known to deform in a brittle or a ductile manner depending on the applied geometric boundary conditions. In the lithosphere however, the importance of boundary conditions in controlling the deformation style has been largely ignored. Under general boundary conditions, both laboratory and field scale observations show that only part of the deformation can localise on through going faults while the rest must remain distributed in 'process zones' where spatially varying shear directions inhibit localisation. Conventional modelling methods (finite difference, finite or discrete elements) use rheologies deduced from laboratory experiments that are not constrained as a function of the geometry of the applied boundary conditions. In this paper, we propose an alternative modelling method that is based on the use of an appropriate distribution of dislocation sources to create the deformation field. This approach, because it does not rely on integrating differential equations from more or less well-constrained boundary conditions, does not require making assumptions on the parameters controlling the level and distribution of stresses within the lithosphere. It only supposes that strain accumulates linearly away from the dislocation singularities satisfying the compatibility equations. We verify that thismodel explains important and hitherto unexplained features of the topography of the Dead Sea region. Following the idea that strain can only localise under specific conditions as inferred from laboratory and field scale observations, we use our model of deformation to predict where deformation can localise and where it has to remain distributed. We find that ~65% of the deformation in the Dead Sea region can localise on kinematically stable through-going strike-slip faults while the remaining ~35% has to remain distributed. Observations suggest that distributed
Inelastic deformation and phenomenological modeling of aluminum including transient effect
Cho, C.W.
1980-01-01
A review was made of several phenomenological theories which have recently been proposed to describe the inelastic deformation of crystalline solids. Hart's deformation theory has many advantages, but there are disagreements with experimental deformation at stress levels below yield. A new inelastic deformation theory was proposed, introducing the concept of microplasticity. The new model consists of five deformation elements: a friction element representing a deformation element controlled by dislocation glide, a nonrecoverable plastic element representing the dislocation leakage rate over the strong dislocation barriers, a microplastic element representing the dislocation leakage rate over the weak barriers, a short range anelastic spring element representing the recoverable anelastic strain stored by piled-up dislocations against the weak barriers, and a long range anelastic spring element representing the recoverable strain stored by piled-up dislocations against the strong barriers. Load relaxation and tensile testing in the plastic range were used to determine the material parameters for the plastic friction elements. The short range and long range anelastic moduli and the material parameters for the kinetics of microplasticity were determined by the measurement of anelastic loops and by performing load relaxation tests in the microplastic region. Experimental results were compared with a computer simulation of the transient deformation behavior of commercial purity aluminum. An attempt was made to correlate the material parameters and the microstructure from TEM. Stability of material parameters during inelastic deformation was discussed and effect of metallurgical variables was examined experimentally. 71 figures, 5 tables.
Droplet Deformation Prediction With the Droplet Deformation and Breakup Model (DDB)
NASA Technical Reports Server (NTRS)
Vargas, Mario
2012-01-01
The Droplet Deformation and Breakup Model was used to predict deformation of droplets approaching the leading edge stagnation line of an airfoil. The quasi-steady model was solved for each position along the droplet path. A program was developed to solve the non-linear, second order, ordinary differential equation that governs the model. A fourth order Runge-Kutta method was used to solve the equation. Experimental slip velocities from droplet breakup studies were used as input to the model which required slip velocity along the particle path. The center of mass displacement predictions were compared to the experimental measurements from the droplet breakup studies for droplets with radii in the range of 200 to 700 mm approaching the airfoil at 50 and 90 m/sec. The model predictions were good for the displacement of the center of mass for small and medium sized droplets. For larger droplets the model predictions did not agree with the experimental results.
Contact Modelling of Large Radius Air Bending with Geometrically Exact Contact Algorithm
NASA Astrophysics Data System (ADS)
Vorkov, V.; Konyukhov, A.; Vandepitte, D.; Duflou, J. R.
2016-08-01
Usage of high-strength steels in conventional air bending is restricted due to limited bendability of these metals. Large-radius punches provide a typical approach for decreasing deformations during the bending process. However, as deflection progresses the loading scheme changes gradually. Therefore, modelling of the contact interaction is essential for an accurate description of the loading scheme. In the current contribution, the authors implemented a plane frictional contact element based on the penalty method. The geometrically exact contact algorithm is used for the penetration determination. The implementation is done using the OOFEM - open source finite element solver. In order to verify the simulation results, experiments have been conducted on a bending press brake for 4 mm Weldox 1300 with a punch radius of 30 mm and a die opening of 80 mm. The maximum error for the springback calculation is 0.87° for the bending angle of 144°. The contact interaction is a crucial part of large radius bending simulation and the implementation leads to a reliable solution for the springback angle.
Pickup, Brian A.; Thomson, Scott L.
2011-01-01
Simplified models have been used to simulate and study the flow-induced vibrations of the human vocal folds. While it is clear that the models’ responses are sensitive to geometry, it is not clear how and to what extent specific geometric features influence model motion. In this study geometric features that played significant roles in governing the motion of a two-layer (body-cover), two-dimensional, finite element vocal fold model were identified. The model was defined using a flow solver based on the viscous, unsteady, Navier–Stokes equations and a solid solver that allowed for large strain and deformation. A screening-type design-of-experiments approach was used to identify the relative importance of 13 geometric parameters. Five output measures were analyzed to assess the magnitude of each geometric parameter’s effect on the model’s motion. The measures related to frequency, glottal width, flow rate, intraglottal angle, and intraglottal phase delay. The most significant geometric parameters were those associated with the cover—primarily the pre-phonatory intraglottal angle—as well as the body inferior angle. Some models exhibited evidence of improved model motion, including mucosal wave-like motion and alternating convergent-divergent glottal profiles, although further improvements are still needed to more closely mimic human vocal fold motion. PMID:21476668
NASA Astrophysics Data System (ADS)
Leforestier, A.; Livolant, F.
1992-10-01
Freeze-fracture electron microscopy allows an ultrastructural analysis of deformations of a DNA cholesteric liquid crystalline sample subjected to a compressive stress applied parallel to the layers, when quickly frozen by projection onto a copper block cooled down to about 10K. A geometrical model of these deformations is proposed. After a brief recall of the usual representation of the cholesteric structure as a succession of equidistant pseudoplanes, we show that these planes are distorted into sinusoidal surfaces whose wavelength is much smaller than the cholesteric pitch and its amplitude modulated with the average molecular orientation relative to the compressive force. The consequences of these deformations regarding double twist occurrence within the structure are analysed. When the DNA concentration in the cholesteric mesophase is low, a complex helicoidal structure is observed. A relationship between these two phenomena is considered and discussed. La microscopie électronique associée à la technique de cryofracture permet une analyse ultrastructurale des déformations de l'organisation cristalline liquide cholestérique d'un échantillon d'ADN en solution : lors de la congélation par projection contre un bloc de cuivre refroidi à environ 10K par de l'hélium liquide, l'échantillon est soumis à des forces de compression parallèles à la stratification cholostérique. Nous présentons une modélisation géométrique de ces déformations. Après un bref rappel de la représentation schématique de la structure cholestérique par une série de plans fictifs, nous montrons que ces plans sont alors transformés en surfaces sinusoïdales dont la période est très inférieure au pas cholostérique et l'amplitude modulée en fonction de l'orientation relative des molécules et de la force de compression. Les conséquences de telles déformations sur l'émergence de double twist dans la structure sont examinées. Pour les plus faibles valeurs de
A geometric level set model for ultrasounds analysis
Sarti, A.; Malladi, R.
1999-10-01
We propose a partial differential equation (PDE) for filtering and segmentation of echocardiographic images based on a geometric-driven scheme. The method allows edge-preserving image smoothing and a semi-automatic segmentation of the heart chambers, that regularizes the shapes and improves edge fidelity especially in presence of distinct gaps in the edge map as is common in ultrasound imagery. A numerical scheme for solving the proposed PDE is borrowed from level set methods. Results on human in vivo acquired 2D, 2D+time,3D, 3D+time echocardiographic images are shown.
Battaglia, Maurizio; ,; Peter, F.; Murray, Jessica R.
2013-01-01
This manual provides the physical and mathematical concepts for selected models used to interpret deformation measurements near active faults and volcanic centers. The emphasis is on analytical models of deformation that can be compared with data from the Global Positioning System (GPS) receivers, Interferometric synthetic aperture radar (InSAR), leveling surveys, tiltmeters and strainmeters. Source models include pressurized spherical, ellipsoidal, and horizontal penny-shaped geometries in an elastic, homogeneous, flat half-space. Vertical dikes and faults are described following the mathematical notation for rectangular dislocations in an elastic, homogeneous, flat half-space. All the analytical expressions were verified against numerical models developed by use of COMSOL Multyphics, a Finite Element Analysis software (http://www.comsol.com). In this way, typographical errors present were identified and corrected. Matlab scripts are also provided to facilitate the application of these models.
Dual geometric worm algorithm for two-dimensional discrete classical lattice models.
Hitchcock, Peter; Sørensen, Erik S; Alet, Fabien
2004-01-01
We present a dual geometrical worm algorithm for two-dimensional Ising models. The existence of such dual algorithms was first pointed out by Prokof'ev and Svistunov [Phys. Rev. Lett. 87, 160601 (2001)
An improved measurement model of binocular vision using geometrical approximation
NASA Astrophysics Data System (ADS)
Wang, Qiyue; Wang, Zhongyu; Yao, Zhenjian; Forrest, Jeffrey; Zhou, Weihu
2016-12-01
In order to improve the precision of a binocular vision measurement system, an effective binocular vision measurement method, named geometrical approximation, is proposed. This method can optimize the measurement results by geometrical approximation operation based on the principles of optimization theory and spatial geometry. To evaluate the properties of the proposed method, both simulative and practical experiments are carried out. The influence of image noise and focal length error on measurement results is discussed. The results show that measurement performance of the proposed method is manifested well. Besides, the proposed method is also compared with Bundle adjustment and least squares method in a practical experiment. The experiment results indicate that the average error, calculated by using the proposed method, is 0.076 mm less than Bundle adjustment’s 0.085 mm, and only half of the least squares method’s 0.146 mm. At the meantime, the proposed method enjoys a high level of computational efficiency when compared to Bundle adjustment. Since no nonlinear iteration optimization is involved, this method can be applied readily to real time on-line measurements.
Integrability of the η-deformed Neumann-Rosochatius model
NASA Astrophysics Data System (ADS)
Arutyunov, Gleb; Heinze, Martin; Medina-Rincon, Daniel
2017-01-01
An integrable deformation of the well-known Neumann-Rosochatius system is studied by considering generalised bosonic spinning solutions on the η-deformed \\text{Ad}{{\\text{S}}5}× {{\\text{S}}5} background. For this integrable model we construct a 4× 4 Lax representation and a set of integrals of motion that ensures its Liouville integrability. These integrals of motion correspond to the deformed analogues of the Neumann-Rosochatius integrals and generalise the previously found integrals for the η-deformed Neumann and {{≤ft(\\text{Ad}{{\\text{S}}5}× {{\\text{S}}5}\\right)}η} geodesic systems. Finally, we briefly comment on consistent truncations of this model.
Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles
Kononova, Olga; Snijder, Joost; Kholodov, Yaroslav; Marx, Kenneth A.; Wuite, Gijs J. L.; Roos, Wouter H.; Barsegov, Valeri
2016-01-01
The mechanical properties of virus capsids correlate with local conformational dynamics in the capsid structure. They also reflect the required stability needed to withstand high internal pressures generated upon genome loading and contribute to the success of important events in viral infectivity, such as capsid maturation, genome uncoating and receptor binding. The mechanical properties of biological nanoparticles are often determined from monitoring their dynamic deformations in Atomic Force Microscopy nanoindentation experiments; but a comprehensive theory describing the full range of observed deformation behaviors has not previously been described. We present a new theory for modeling dynamic deformations of biological nanoparticles, which considers the non-linear Hertzian deformation, resulting from an indenter-particle physical contact, and the bending of curved elements (beams) modeling the particle structure. The beams’ deformation beyond the critical point triggers a dynamic transition of the particle to the collapsed state. This extreme event is accompanied by a catastrophic force drop as observed in the experimental or simulated force (F)-deformation (X) spectra. The theory interprets fine features of the spectra, including the nonlinear components of the FX-curves, in terms of the Young’s moduli for Hertzian and bending deformations, and the structural damage dependent beams’ survival probability, in terms of the maximum strength and the cooperativity parameter. The theory is exemplified by successfully describing the deformation dynamics of natural nanoparticles through comparing theoretical curves with experimental force-deformation spectra for several virus particles. This approach provides a comprehensive description of the dynamic structural transitions in biological and artificial nanoparticles, which is essential for their optimal use in nanotechnology and nanomedicine applications. PMID:26821264
Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles.
Kononova, Olga; Snijder, Joost; Kholodov, Yaroslav; Marx, Kenneth A; Wuite, Gijs J L; Roos, Wouter H; Barsegov, Valeri
2016-01-01
The mechanical properties of virus capsids correlate with local conformational dynamics in the capsid structure. They also reflect the required stability needed to withstand high internal pressures generated upon genome loading and contribute to the success of important events in viral infectivity, such as capsid maturation, genome uncoating and receptor binding. The mechanical properties of biological nanoparticles are often determined from monitoring their dynamic deformations in Atomic Force Microscopy nanoindentation experiments; but a comprehensive theory describing the full range of observed deformation behaviors has not previously been described. We present a new theory for modeling dynamic deformations of biological nanoparticles, which considers the non-linear Hertzian deformation, resulting from an indenter-particle physical contact, and the bending of curved elements (beams) modeling the particle structure. The beams' deformation beyond the critical point triggers a dynamic transition of the particle to the collapsed state. This extreme event is accompanied by a catastrophic force drop as observed in the experimental or simulated force (F)-deformation (X) spectra. The theory interprets fine features of the spectra, including the nonlinear components of the FX-curves, in terms of the Young's moduli for Hertzian and bending deformations, and the structural damage dependent beams' survival probability, in terms of the maximum strength and the cooperativity parameter. The theory is exemplified by successfully describing the deformation dynamics of natural nanoparticles through comparing theoretical curves with experimental force-deformation spectra for several virus particles. This approach provides a comprehensive description of the dynamic structural transitions in biological and artificial nanoparticles, which is essential for their optimal use in nanotechnology and nanomedicine applications.
Effect of Shear Deformation and Continuity on Delamination Modelling with Plate Elements
NASA Technical Reports Server (NTRS)
Glaessgen, E. H.; Riddell, W. T.; Raju, I. S.
1998-01-01
The effects of several critical assumptions and parameters on the computation of strain energy release rates for delamination and debond configurations modeled with plate elements have been quantified. The method of calculation is based on the virtual crack closure technique (VCCT), and models that model the upper and lower surface of the delamination or debond with two-dimensional (2D) plate elements rather than three-dimensional (3D) solid elements. The major advantages of the plate element modeling technique are a smaller model size and simpler geometric modeling. Specific issues that are discussed include: constraint of translational degrees of freedom, rotational degrees of freedom or both in the neighborhood of the crack tip; element order and assumed shear deformation; and continuity of material properties and section stiffness in the vicinity of the debond front, Where appropriate, the plate element analyses are compared with corresponding two-dimensional plane strain analyses.
2015-01-07
AFRL-OSR-VA-TR-2015-0039 High-Fidelity Geometric Modeling and Mesh Generation for Mechanics Characterization of Polycrystalline Materials Yongjie...0188 The public reporting burden for this collection of information is estimated to average 1 hour per response, including the time for reviewing...From - To) Oct 1, 2011-Sep 30, 2014 4. TITLE AND SUBTITLE High-Fidelity Geometric Modeling and Mesh Generation for Mechanics Characterization of
Performance Analysis of Tandem-L Mission for Modeling Volcanic and Seismic Deformation Sources
NASA Astrophysics Data System (ADS)
Ansari, Homa; Goel, Kanika; Parizzi, Alessandro; Sudhaus, Henriette; Adam, Nico; Eineder, Michael
2015-04-01
Although a great number of publications have focused on the application of InSAR in deformation source modeling as well as the development of different algorithms in this regard, little investigation has been dedicated to the sensitivity analysis of the InSAR in deformation source modeling. Our purpose is to address this issue by analyzing the reliability of InSAR in modeling the deformation sources due to landslides, seismic and volcanic activities, with special focus on the L band SAR measurements. The sensitivity analysis is considered for three commonly used geophysical models in case of subsidence, seismic and volcanic activities; namely, the Gaussian subsidence bowl, Okada and Mogi point source, respectively. In each of the cases, the InSAR sensitivity is analytically formulated and its performance is investigated using simulated SAR data. The investigations are carried out using stochastic error propagation approaches to infer the precision of the models' parameters as well as their mutual covariance. The limiting factors in SAR interferometry are categorized in two groups and investigated separately in sensitivity analysis; with the first dealing with the geometrical limits imposed by the side looking geometry of the SAR measurements and the second focusing on the InSAR stochastic characteristics in the L band.
Patient-specific liver deformation modeling for tumor tracking
NASA Astrophysics Data System (ADS)
Oh, Young-Taek; Hwang, Youngkyoo; Kim, Jung-Bae; Bang, Won-Chul; Kim, James D. K.; Kim, Chang Yeong
2013-03-01
We present a new method for patient-specific liver deformation modeling for tumor tracking. Our method focuses on deforming two main blood vessels of the liver - hepatic and portal vein - to utilize them as features. A novel centerline editing algorithm based on ellipse fitting is introduced for vessel deformation. Centerline-based blood vessel model and various interpolation methods are often used for generating a deformed model at the specific time t. However, it may introduce artifacts when models used in interpolation are not consistent. One of main reason of this inconsistency is the location of bifurcation points differs from each image. To solve this problem, our method generates a base model from one of patient's CT images. Next, we apply a rigid iterative closest point (ICP) method to the base model with centerlines of other images. Because the transformation is rigid, the length of each vessel's centerline is preserved while some part of the centerline is slightly deviated from centerlines of other images. We resolve this mismatch using our centerline editing algorithm. Finally, we interpolate three deformed models of liver, blood vessels, tumor using quadratic Bézier curves. We demonstrate the effectiveness of the proposed approach with the real patient data.
Cheung, Y; Sawant, A
2014-06-15
Purpose: Most clinically-deployed strategies for respiratory motion management in lung radiotherapy (e.g., gating, tracking) use external markers that serve as surrogates for tumor motion. However, typical lung phantoms used to validate these strategies are rigid-exterior+rigid-interior or rigid-exterior+deformable-interior. Neither class adequately represents the human anatomy, which is deformable internally as well as externally. We describe the construction and experimental validation of a more realistic, externally- and internally-deformable, programmable lung phantom. Methods: The outer shell of a commercially-available lung phantom (RS- 1500, RSD Inc.) was used. The shell consists of a chest cavity with a flexible anterior surface, and embedded vertebrae, rib-cage and sternum. A 3-axis platform was programmed with sinusoidal and six patient-recorded lung tumor trajectories. The platform was used to drive a rigid foam ‘diaphragm’ that compressed/decompressed the phantom interior. Experimental characterization comprised of mapping the superior-inferior (SI) and anterior-posterior (AP) trajectories of external and internal radioopaque markers with kV x-ray fluoroscopy and correlating these with optical surface monitoring using the in-room VisionRT system. Results: The phantom correctly reproduced the programmed motion as well as realistic effects such as hysteresis. The reproducibility of marker trajectories over multiple runs for sinusoidal as well as patient traces, as characterized by fluoroscopy, was within 0.4 mm RMS error for internal as well as external markers. The motion trajectories of internal and external markers as measured by fluoroscopy were found to be highly correlated (R=0.97). Furthermore, motion trajectories of arbitrary points on the deforming phantom surface, as recorded by the VisionRT system also showed a high correlation with respect to the fluoroscopically-measured trajectories of internal markers (R=0.92). Conclusion: We have
Deformed Calogero-Sutherland model and fractional quantum Hall effect
NASA Astrophysics Data System (ADS)
Atai, Farrokh; Langmann, Edwin
2017-01-01
The deformed Calogero-Sutherland (CS) model is a quantum integrable system with arbitrary numbers of two types of particles and reducing to the standard CS model in special cases. We show that a known collective field description of the CS model, which is based on conformal field theory (CFT), is actually a collective field description of the deformed CS model. This provides a natural application of the deformed CS model in Wen's effective field theory of the fractional quantum Hall effect (FQHE), with the two kinds of particles corresponding to electrons and quasi-hole excitations. In particular, we use known mathematical results about super-Jack polynomials to obtain simple explicit formulas for the orthonormal CFT basis proposed by van Elburg and Schoutens in the context of the FQHE.
Modeling hemodynamic forces in carotid artery based on local geometric features.
Chen, Yimin; Canton, Gador; Kerwin, William S; Chiu, Bernard
2016-09-01
Hemodynamic wall shear stress (WSS) plays an important role in the initiation and progression of carotid atherosclerosis. This study aims at developing a technique to model WSS distribution based on point-wise geometric features that can be efficiently computed. Computational fluid dynamic analysis was performed for ten subjects. Surface curvatures, vascular radius, rate of change of radius along the longitudinal direction and standardized longitudinal/circumferential coordinates were computed on a point-wise basis for the arteries. Each of these point-wise geometric parameters was transformed to maximize the adjusted correlation coefficient. The transformed geometric parameters subsequently served as input variables of a multiple regression model. Multiple regression analysis revealed a significant relationship ([Formula: see text]) between WSS and three geometric parameters in internal and external carotid arteries (ICA and ECA). These three geometric parameters include vascular radius (ICA: [Formula: see text], ECA: [Formula: see text]), standardized longitudinal/circumference coordinates (ICA: [Formula: see text], ECA: [Formula: see text]) and Gaussian curvature (ICA: [Formula: see text], ECA: [Formula: see text]). The results suggest that the proposed geometric parameters can serve as risk indicator in large-scale clinical studies aiming at elucidating the roles of local geometric risk of atherosclerosis.
NASA Astrophysics Data System (ADS)
Sonne, M. R.; Cech, J.; Pranov, H.; Kofod, G.; Garnæs, J.; Lam, Y. C.; Hattel, J. H.; Taboryski, R.
2016-10-01
In the present work, a manufacturing process for transferring nanostructures from a glass wafer, to a double-curved insert for injection moulding is demonstrated. A nanostructure consisting of sinusoidal cross-gratings with a period of 426 nm is successfully transferred to hemispheres on an aluminium substrate with three different radii; 500 µm, 1000 µm and 2000 µm, respectively. The nanoimprint is performed using a 50 µm thick nickel foil, manufactured using electroforming. During the imprinting process, the nickel foil is stretched due to the curved surface of the aluminium substrate. Experimentally, it is possible to address this stretch by counting the periods of the cross-gratings via SEM characterization. A model for the deformation of the nickel foil during nanoimprint is developed, utilizing non-linear material and geometrical behaviour. Good agreement between measured and numerically calculated stretch ratios on the surface of the deformed nickel foil is found, and it is shown, that from the model it is also possible to predict the geometrical extend of the nanostructured area on the curved surfaces.
NASA Astrophysics Data System (ADS)
Burkett, Michael; Clancy, Sean; Maudlin, Paul; Holian, Kathleen
2001-06-01
: Previously developed constitutive models and solution algorithms for anisotropic elastoplastic material strength has been implemented in the three-dimensional CONEJO hydrodynamics code. CONEJO is an explicit, Eulerian continuum mechanics code that is utilized to predict formation processes associated with material deformation at elevated strain-rates and is a code development project under the Accelerated Strategic Computing Initiative (ASCI) program. Some special features of CONEJO include a high-order advection algorithm, a material interface tracking scheme, and van Leer monotonic advection-limiting. The anisotropic constitutive modeling is posed in an unrotated material frame using the theorem of polar decomposition to describe rigid body rotation. An Euler-Rodrigues description is used to quantify the rigid body rotations. Continuous quadratic yield functions fitted from polycrystal simulations for a metallic hexagonal-close-packed structure were utilized. Associative flow formulations incorporating these yield functions were solved using a geometric normal return method. Simple rectangular shear problems, "R-value" problems, and Taylor cylinder impact test data were utilized to verify and validate the implementation of the anisotropic model. A "stretching rod" problem (involving large strain and strain-rate deformation) was selected to investigate the effects of material anisotropy for this deformation process. The rod necking rate and topology was compared for CONEJO simulations using several isotropic and anisotropic descriptions that utilized the Mechanical Threshold Stress (MTS) model.
Static deformation modeling and analysis of flexure hinges made of a shape memory alloy
NASA Astrophysics Data System (ADS)
Du, Zhijiang; Yang, Miao; Dong, Wei; Zhang, Dan
2016-11-01
The flexure hinge is a key element in compliant mechanisms to achieve continuous motion; however the motion range of a flexure hinge is severely restricted by the material’s allowable strain. Due to the superelasticity effect, shape memory alloys (SMAs) can undergo much larger strain than other metals; this means that they are excellent candidates for the fabrication of flexure hinges with a large motion range. In this paper, a simple static deformation modeling approach is proposed for a flexure hinge made of a SMA. The superelastic behavior of the SMA is described by Brinson’s constitutive model. The flexure hinge is considered as a non-prismatic cantilever beam associated with geometrical and material nonlinearities. Govern equations of the flexure hinge are derived and solved numerically by applying the nonlinear bending theory of the Euler-Bernoulli beam. Experimental tests show that the proposed modeling approach can predict the deformation of the flexure hinge precisely; the maximum relative error is less than 6.5%. Based on the static deformation model, the motion capacity, the stiffness characteristic and the rotational error of the flexure hinge are also investigated. The results reveal that the flexure hinge made of a SMA has great potential to construct compliant mechanisms with a large motion range.
Weichert, Frank; Schröder, Andreas; Landes, Constantin; Shamaa, Ali; Awad, Said Kamel; Walczak, Lars; Müller, Heinrich; Wagner, Mathias
2010-06-01
In this article, we present a new method for the generation of surface meshes of biological soft tissue. The method is based on the deformable surface model technique and is extended to histological data sets. It relies on an iterative adjustment towards polygonal segments describing the histological structures of the soft tissue. The generated surface meshes allow for the construction of volumetric meshes through a standard constrained Delaunay approach and, thus, for the application in finite element methods. The geometric properties of volumetric meshes have an immediate influence on the numerical conditioning and, therewith, on the stability of the finite element method and the convergence of iterative solvers. In this article, the influence of the surface meshes on the quality of the volumetric meshes is analysed in terms of the spectral condition number of the stiffness matrices, which are assembled within Newton's method. The non-linear material behavior of biological soft tissue is modeled by the Mooney-Rivlin material law. The subject is motivated by the requirements of virtual surgery.
Active deformation of the Gorda plate: Constraining deformation models with new geophysical data
NASA Astrophysics Data System (ADS)
Chaytor, Jason D.; Goldfinger, Chris; Dziak, Robert P.; Fox, Christopher G.
2004-04-01
The Gorda plate, the southernmost fragment of the larger Juan de Fuca plate system, is an example of a nonrigidly deforming tectonic accommodation zone or buffer plate, absorbing deformation and allowing the surrounding larger plates to act in a more rigid fashion. Here we present a new structural analysis of the plate based on full-plate bathymetric coverage, augmented by seismic reflection data and earthquake moment tensors and locations. We interpret internal deformation of the Gorda plate as an asymmetrical flexural-slip buckle with a vertical axis, utilizing reactivation of spreading-ridge fabric normal faults as strike-slip faults. Newly formed second-generation faults crosscutting the structural grain overprint the reactivated structures. The spreading fabric faults finally begin a second phase of extension as the plate approaches the subduction zone. This model, based on fault constraints, has allowed investigation of ridge-plate subduction interactions, and suggests that spreading-rate variations along the Gorda Ridge may be controlled by internal deformation of the plate rather than the reverse, as previously hypothesized.
Image-based Modeling of PSF Deformation with Application to Limited Angle PET Data.
Matej, Samuel; Li, Yusheng; Panetta, Joseph; Karp, Joel S; Surti, Suleman
2016-10-01
The point-spread-functions (PSFs) of reconstructed images can be deformed due to detector effects such as resolution blurring and parallax error, data acquisition geometry such as insufficient sampling or limited angular coverage in dual-panel PET systems, or reconstruction imperfections/simplifications. PSF deformation decreases quantitative accuracy and its spatial variation lowers consistency of lesion uptake measurement across the imaging field-of-view (FOV). This can be a significant problem with dual panel PET systems even when using TOF data and image reconstruction models of the detector and data acquisition process. To correct for the spatially variant reconstructed PSF distortions we propose to use an image-based resolution model (IRM) that includes such image PSF deformation effects. Originally the IRM was mostly used for approximating data resolution effects of standard PET systems with full angular coverage in a computationally efficient way, but recently it was also used to mitigate effects of simplified geometric projectors. Our work goes beyond this by including into the IRM reconstruction imperfections caused by combination of the limited angle, parallax errors, and any other (residual) deformation effects and testing it for challenging dual panel data with strongly asymmetric and variable PSF deformations. We applied and tested these concepts using simulated data based on our design for a dedicated breast imaging geometry (B-PET) consisting of dual-panel, time-of-flight (TOF) detectors. We compared two image-based resolution models; i) a simple spatially invariant approximation to PSF deformation, which captures only the general PSF shape through an elongated 3D Gaussian function, and ii) a spatially variant model using a Gaussian mixture model (GMM) to more accurately capture the asymmetric PSF shape in images reconstructed from data acquired with the B-PET scanner geometry. Results demonstrate that while both IRMs decrease the overall uptake
Computational model of deformable lenses actuated by dielectric elastomers
NASA Astrophysics Data System (ADS)
Lu, Tongqing; Cai, Shengqiang; Wang, Huiming; Suo, Zhigang
2013-09-01
A recent design of deformable lens mimics the human eye, adjusting its focal length in response to muscle-like actuation. The artificial muscle is a membrane of a dielectric elastomer subject to a voltage. Here, we calculate the coupled and inhomogeneous deformation of the lens and the dielectric elastomer actuator by formulating a nonlinear boundary-value problem. We characterize the strain-stiffening elastomer with the Gent model and describe the voltage-induced deformation using the model of ideal dielectric elastomer. The computational predictions agree well with experimental data. We use the model to explore the space of parameters, including the prestretch of the membrane, the volume of the liquid in the lens, and the size of the dielectric elastomer actuator relative to the lens. We examine how various modes of failure limit the minimum radius of curvature.
Symmetry Based No Core Shell Model in a Deformed Basis
NASA Astrophysics Data System (ADS)
Kekejian, David; Draayer, Jerry; Launey, Kristina
2017-01-01
To address current limitations of shell-model descriptions of large spatial deformation and cluster structures, we adopt a no-core shell model with a deformed harmonic oscillator basis and implement an angular momentum projection in a symmetry-adapted scheme. This approach allows us to reach larger model spaces as a result of computational memory savings for calculations of highly deformed states, such as the Hoyle state in C-12. The method is first tested with schematic interactions, but the ultimate goal is to carry forward calculations with realistic nucleon-nucleon interactions in future work. Supported by the U.S. NSF (OCI-0904874, ACI-1516338) and the U.S. DOE (DE-SC0005248), and benefitted from computing resources provided by Blue Waters and LSU's Center for Computation & Technology.
Tidal deformation of planets: experience in experimental modeling.
NASA Astrophysics Data System (ADS)
Bobryakov, A. P.; Revuzhenko, A. F.; Shemyakin, E. I.
1992-06-01
Two types of apparatus are described for laboratory modeling of tidal deformation. Plane deformation occurs in the first, and the model of the body has the shape of an elliptical cylinder; in the second three-dimensional deformation occurs, and the model is spheroidal in shape. In both cases displacements simulating motion of the tidal wave are assigned on the boundary. A global mechanism of directed mass transfer has been discovered. It is connected with transformation of vertical displacements to horizontal ones. The internal particles describe almost closed trajectories in one complete rotation of the tidal wave, but do not return to their original position. Residual displacements accumulate with increasing number of cycles and lead to differential rotation of internal masses. Questions surrounding experimental measurement of energy dissipation and the role of an internal rigid core are investigated. The effect of directed transfer on the physical fields of planets is discussed.
Winter, Samantha Lee; Forrest, Sarah Michelle; Wallace, Joanne; Challis, John H
2017-08-08
The purpose of this study was to validate a new geometric solids model, developed to address the lack of female specific models for body segment inertial parameter estimation. A second aim was to determine the effect of reducing the number of geometric solids used to model the limb segments on model accuracy. The 'full' model comprised 56 geometric solids, the 'reduced' 31, and the 'basic' 16. Predicted whole-body inertial parameters were compared with direct measurements (reaction board, scales), and predicted segmental parameters with those estimated from whole-body DXA scans for 28 females. The percentage root mean square error (%RMSE) for whole-body volume was <2.5% for all models, and 1.9% for the full model. The %RMSE for whole-body center of mass location was <3.2% for all models. The %RMSE whole-body mass was <3.3% for the full model. The RMSE for segment masses was <0.5 kg (<0.5%) for all segments; Bland-Altman analysis showed the full and reduced models could adequately model thigh, forearm, foot and hand segments, but the full model was required for the trunk segment. The proposed model was able to accurately predict body segment inertial parameters for females, more geometric solids are required to more accurately model the trunk.
Role of anelastic rheology in volcanic deformation modelling
NASA Astrophysics Data System (ADS)
Trasatti, E.; Giunchi, C.; Bonafede, M.
2003-04-01
Analogical models of ground deformation in volcanic areas often show better agreement with observations than mathematical models assuming a perfectly elastic behaviour of the medium. In particular, extensive sand-box experiments show that, following an inflation episode at depth, strain localization takes place above the source, along fault-like structures, which play a fundamental role in governing the cumulative long term deformation of the medium. Owing to the low lithostatic pressure, to the widespread presence of fluids and to the low cohesion of volcanic material, shallow layers in a volcanic region are better described in terms of the modified Mohr-Coulomb constitutive relation. Deep layers, on the other side, are better described in terms of viscoelastic constitutive relations, owing to the high temperatures close to magma reservoirs. Taking into account the inelastic properties of the medium, it is possible to lower considerably the overpressure estimates inferred from elastic models and to reconcile inferred overpressure values with petrologic constraints. In this study, we develop finite element models of ground deformation in volcanic areas, employing elastic and inelastic constitutive laws. The aim of the analysis is to elucidate how a heterogeneous structure of the medium (variations in rheologic parameters and pore pressure) affect the stress and strain distribution. The huge ground deformation (more than 1.5 m) observed at Campi Flegrei caldera (Italy) during 1982-84 is modelled in terms of an inelastic behaviour of the medium. The caldera is characterized by different mechanical (elastic and inelastic) properties with respect to the host rocks, due to the different formation and evolution. Axi-symmetric finite element models are developed, involving an overpressure source located at depth greater than the deepest limit of hypocenter distribution. Models take into account gravity and the initial isotropic (lithostatic) stress state is perturbed by
Personalized heterogeneous deformable model for fast volumetric registration.
Si, Weixin; Liao, Xiangyun; Wang, Qiong; Heng, Pheng Ann
2017-02-20
Biomechanical deformable volumetric registration can help improve safety of surgical interventions by ensuring the operations are extremely precise. However, this technique has been limited by the accuracy and the computational efficiency of patient-specific modeling. This study presents a tissue-tissue coupling strategy based on penalty method to model the heterogeneous behavior of deformable body, and estimate the personalized tissue-tissue coupling parameters in a data-driven way. Moreover, considering that the computational efficiency of biomechanical model is highly dependent on the mechanical resolution, a practical coarse-to-fine scheme is proposed to increase runtime efficiency. Particularly, a detail enrichment database is established in an offline fashion to represent the mapping relationship between the deformation results of high-resolution hexahedral mesh extracted from the raw medical data and a newly constructed low-resolution hexahedral mesh. At runtime, the mechanical behavior of human organ under interactions is simulated with this low-resolution hexahedral mesh, then the microstructures are synthesized in virtue of the detail enrichment database. The proposed method is validated by volumetric registration in an abdominal phantom compression experiments. Our personalized heterogeneous deformable model can well describe the coupling effects between different tissues of the phantom. Compared with high-resolution heterogeneous deformable model, the low-resolution deformable model with our detail enrichment database can achieve 9.4× faster, and the average target registration error is 3.42 mm, which demonstrates that the proposed method shows better volumetric registration performance than state-of-the-art. Our framework can well balance the precision and efficiency, and has great potential to be adopted in the practical augmented reality image-guided robotic systems.
Modeling of Intellite 3 Layer Deformable Mirror
Papavasiliou, A
2002-04-15
This is a report on modeling of the Intellite three layer membrane mirror design. The goal of this project was to provide Intellite with a model that will allow them to design a mirror with confidence.
Forward and inverse modelling of post-seismic deformation
NASA Astrophysics Data System (ADS)
Crawford, Ophelia; Al-Attar, David; Tromp, Jeroen; Mitrovica, Jerry X.
2017-02-01
We consider a new approach to both the forward and inverse problems in post-seismic deformation. We present a method for forward modelling post-seismic deformation in a self-gravitating, heterogeneous and compressible earth with a variety of linear and nonlinear rheologies. We further demonstrate how the adjoint method can be applied to the inverse problem both to invert for rheological structure and to calculate the sensitivity of a given surface measurement to changes in rheology or time-dependence of the source. Both the forward and inverse aspects are illustrated with several numerical examples implemented in a spherically symmetric earth model.
Forward and inverse modelling of post-seismic deformation
NASA Astrophysics Data System (ADS)
Crawford, Ophelia; Al-Attar, David; Tromp, Jeroen; Mitrovica, Jerry X.
2016-11-01
We consider a new approach to both the forward and inverse problems in post-seismic deformation. We present a method for forward modelling post-seismic deformation in a self-gravitating, heterogeneous and compressible earth with a variety of linear and non-linear rheologies. We further demonstrate how the adjoint method can be applied to the inverse problem both to invert for rheological structure and to calculate the sensitivity of a given surface measurement to changes in rheology or time-dependence of the source. Both the forward and inverse aspects are illustrated with several numerical examples implemented in a spherically symmetric earth model.
NASA Astrophysics Data System (ADS)
Turienzo, M. M.; Dimieri, L. V.
2005-06-01
At the confluence of the Las Aucas stream with the Diamante River (69°30'W Long.; 34°40'S Lat.), kilometer-scale structures affecting basement rocks were surveyed. Andean deformation involved both Cordillera Principal and Cordillera Frontal rocks, whose structures probably were locally contemporaneous and intimately related. The Cordón del Carrizalito, a huge structure interpreted as a rigid basement block raised by a reverse fault on the eastern edge, which produced intense deformation in the sedimentary cover, can be explained by a geometric and kinematic model for basement-involved structures in the upper crustal levels. The Lomas Bayas structure is considered a west-vergent anticline associated with a backthrust, which branches out from the basement block's eastern edge. A new kinematic quantitative model, based on the Lomas Bayas structure, explains basement-involved backthrusts. Shearing of the basement rocks produced progressive rotation of the backthrust's hangingwall block, whose upper toe is bent but sedimentary cover is delaminated and detached. These retrodeformable models are applied to two cross-sections to test their viability and calculate the structural shortening.
The effects of geometric uncertainties on computational modelling of knee biomechanics.
Meng, Qingen; Fisher, John; Wilcox, Ruth
2017-08-01
The geometry of the articular components of the knee is an important factor in predicting joint mechanics in computational models. There are a number of uncertainties in the definition of the geometry of cartilage and meniscus, and evaluating the effects of these uncertainties is fundamental to understanding the level of reliability of the models. In this study, the sensitivity of knee mechanics to geometric uncertainties was investigated by comparing polynomial-based and image-based knee models and varying the size of meniscus. The results suggested that the geometric uncertainties in cartilage and meniscus resulting from the resolution of MRI and the accuracy of segmentation caused considerable effects on the predicted knee mechanics. Moreover, even if the mathematical geometric descriptors can be very close to the imaged-based articular surfaces, the detailed contact pressure distribution produced by the mathematical geometric descriptors was not the same as that of the image-based model. However, the trends predicted by the models based on mathematical geometric descriptors were similar to those of the imaged-based models.
Data driven modeling of plastic deformation
Versino, Daniele; Tonda, Alberto; Bronkhorst, Curt A.
2017-05-01
In this paper the application of machine learning techniques for the development of constitutive material models is being investigated. A flow stress model, for strain rates ranging from 10–4 to 1012 (quasi-static to highly dynamic), and temperatures ranging from room temperature to over 1000 K, is obtained by beginning directly with experimental stress-strain data for Copper. An incrementally objective and fully implicit time integration scheme is employed to integrate the hypo-elastic constitutive model, which is then implemented into a finite element code for evaluation. Accuracy and performance of the flow stress models derived from symbolic regression are assessed by comparisonmore » to Taylor anvil impact data. The results obtained with the free-form constitutive material model are compared to well-established strength models such as the Preston-Tonks-Wallace (PTW) model and the Mechanical Threshold Stress (MTS) model. Here, preliminary results show candidate free-form models comparing well with data in regions of stress-strain space with sufficient experimental data, pointing to a potential means for both rapid prototyping in future model development, as well as the use of machine learning in capturing more data as a guide for more advanced model development.« less
NASA Astrophysics Data System (ADS)
Hooper, Andrew John
While conventional interferometric synthetic aperture radar (InSAR) is a very effective technique for measuring crustal deformation, almost any interferogram includes large areas where the signals decorrelate and no measurement is possible. Consequently, most InSAR studies to date have focused on areas that are dry and sparsely vegetated. A relatively new analysis technique, permanent scatterer InSAR, overcomes the decorrelation problem by identifying resolution elements whose echo is dominated by a single scatterer in a series of interferograms. This technique has been useful for analysis of urban areas, where angular structures produce efficient reflectors that dominate background scattering. However, man-made structures are absent from most of the Earth's surface. Furthermore, this technique requires, a priori, an approximate temporal model for the deformation, whereas characterizing the temporal pattern of deformation is commonly one of the aims of any study. We have developed a new method of analysis, StaMPS, using spatial correlation of interferogram phase to find a network of stable pixels in all terrains, with or without buildings. Prior knowledge of temporal variations in the deformation rate is not required. We refer to these pixels as persistent scatterers (PS). A key component of our method is the development of two algorithms to unwrap a three-dimensional series of interferograms. We observe temporally-variable deformation, using an initial version of StaMPS, in data acquired over Long Valley caldera in California, for a period when deformation rates varied significantly. The inferred displacements of the PS compare well with ground truth. Using an enhanced version of StaMPS, we detect a period of steady deflation within the Volcan Alcedo caldera in the Galapagos Islands between 1997 and 2001, which we model with a contracting ellipsoidal magma body. Conventional InSAR has been limited here until now by high rates of temporal decorrelation over much of
Multi-Mode GF-3 Satellite Image Geometric Accuracy Verification Using the RPC Model.
Wang, Taoyang; Zhang, Guo; Yu, Lei; Zhao, Ruishan; Deng, Mingjun; Xu, Kai
2017-09-01
The GaoFen-3 (GF-3) satellite is the first C-band multi-polarization synthetic aperture radar (SAR) imaging satellite with a resolution up to 1 m in China. It is also the only SAR satellite of the High-Resolution Earth Observation System designed for civilian use. There are 12 different imaging models to meet the needs of different industry users. However, to use SAR satellite images for related applications, they must possess high geometric accuracy. In order to verify the geometric accuracy achieved by the different modes of GF-3 images, we analyze the SAR geometric error source and perform geometric correction tests based on the RPC model with and without ground control points (GCPs) for five imaging modes. These include the spotlight (SL), ultra-fine strip (UFS), Fine Strip I (FSI), Full polarized Strip I (QPSI), and standard strip (SS) modes. Experimental results show that the check point residuals are large and consistent without GCPs, but the root mean square error of the independent checkpoints for the case of four corner control points is better than 1.5 pixels, achieving a similar level of geometric positioning accuracy to that of international satellites. We conclude that the GF-3 satellite can be used for high-accuracy geometric processing and related industry applications.
Multi-Mode GF-3 Satellite Image Geometric Accuracy Verification Using the RPC Model
Wang, Taoyang; Yu, Lei; Deng, Mingjun; Xu, Kai
2017-01-01
The GaoFen-3 (GF-3) satellite is the first C-band multi-polarization synthetic aperture radar (SAR) imaging satellite with a resolution up to 1 m in China. It is also the only SAR satellite of the High-Resolution Earth Observation System designed for civilian use. There are 12 different imaging models to meet the needs of different industry users. However, to use SAR satellite images for related applications, they must possess high geometric accuracy. In order to verify the geometric accuracy achieved by the different modes of GF-3 images, we analyze the SAR geometric error source and perform geometric correction tests based on the RPC model with and without ground control points (GCPs) for five imaging modes. These include the spotlight (SL), ultra-fine strip (UFS), Fine Strip I (FSI), Full polarized Strip I (QPSI), and standard strip (SS) modes. Experimental results show that the check point residuals are large and consistent without GCPs, but the root mean square error of the independent checkpoints for the case of four corner control points is better than 1.5 pixels, achieving a similar level of geometric positioning accuracy to that of international satellites. We conclude that the GF-3 satellite can be used for high-accuracy geometric processing and related industry applications. PMID:28862658
Mathematical models of carbon-carbon composite deformation
NASA Astrophysics Data System (ADS)
Golovin, N. N.; Kuvyrkin, G. N.
2016-09-01
Mathematical models of carbon-carbon composites (CCC) intended for describing the processes of deformation of structures produced by using CCC under high-temperature loading are considered. A phenomenological theory of CCC inelastic deformation is proposed, where such materials are considered as homogeneous ones with effective characteristics and where their high anisotropy of mechanical characteristics and different ways of resistance to extension and compression are taken into account. Micromechanical models are proposed for spatially reinforced CCC, where the difference between mechanical characteristics of components and the reinforcement scheme are taken into account. Themodel parameters are determined from the results of experiments of composite macrospecimens in the directions typical of the material. A version of endochronictype theory with several internal times "launched" for each composite component and related to some damage accumulation mechanisms is proposed for describing the inelastic deformation. Some practical examples are considered.
Geometric approach to nonlinear coherent states using the Higgs model for harmonic oscillator
NASA Astrophysics Data System (ADS)
Mahdifar, A.; Roknizadeh, R.; Naderi, M. H.
2006-06-01
In this paper, we investigate the relation between the curvature of the physical space and the deformation function of the deformed oscillator algebra using the nonlinear coherent states approach. For this purpose, we study two-dimensional harmonic oscillators on the flat surface and on a sphere by applying the Higgs model. With the use of their algebras, we show that the two-dimensional oscillator algebra on a surface can be considered as a deformed one-dimensional oscillator algebra where the effect of the curvature of the surface appears as a deformation function. We also show that the curvature of the physical space plays the role of deformation parameter. Then we construct the associated coherent states on the flat surface and on a sphere and compare their quantum statistical properties, including quadrature squeezing and antibunching effect.
Wang, L.; Barabash, R. I.; Yang, Y.; Bieler, T. R.; Crimp, M. A.; Eisenlohr, P.; Liu, W.; Ice, G. E.
2011-03-01
Grain-level heterogeneous deformation was studied in a polycrystalline {alpha}-Ti specimen deformed by four-point bending. Dislocation slip activity in the microstructure was investigated by surface slip trace analysis. Three-dimensional-X-ray diffraction (3D-XRD) was used to investigate subsurface lattice rotations and to identify geometrically necessary dislocations (GNDs). The slip systems of local GNDs were analyzed by studying the streaking directions of reflections in corresponding Laue patterns. The analysis performed in one grain indicated that the subsurface GNDs were from the same slip system identified using slip trace analysis in backscattered electron images. A crystal plasticity finite element (CPFE) model was used to simulate deformation of the same microstructural region. The predictions of dislocation slip activity match the general aspects of the experimental observations, including the ability to simulate the activation of different slip systems in grains where multiple slip systems were activated. Prediction of local crystal rotations, however, was the least accurate aspect of the CPFE model.
Wang, Leyun; Barabash, Rozaliya; Yang, Y; Bieler, Prof T R; Crimp, Prof M A; Eisenlohr, P; Liu, W.; Ice, Gene E
2011-01-01
Grain-level heterogeneous deformation was studied in a polycrystalline {alpha}-Ti specimen deformed by four-point bending. Dislocation slip activity in the microstructure was investigated by surface slip trace analysis. Three-dimensional-X-ray diffraction (3D-XRD) was used to investigate subsurface lattice rotations and to identify geometrically necessary dislocations (GNDs). The slip systems of local GNDs were analyzed by studying the streaking directions of reflections in corresponding Laue patterns. The analysis performed in one grain indicated that the subsurface GNDs were from the same slip system identified using slip trace analysis in backscattered electron images. A crystal plasticity finite element (CPFE) model was used to simulate deformation of the same microstructural region. The predictions of dislocation slip activity match the general aspects of the experimental observations, including the ability to simulate the activation of different slip systems in grains where multiple slip systems were activated. Prediction of local crystal rotations, however, was the least accurate aspect of the CPFE model.
An immersed-boundary method for modeling flow of deformable blood cells in complex geometry
NASA Astrophysics Data System (ADS)
Balogh, Peter; Bagchi, Prosenjit
2016-11-01
We present a computational methodology for simulating blood flow at the cellular scale in highly complex geometries, such as microvascular networks. Immersed boundary methods provide the foundation for our approach, as they allow modeling flows in arbitrary geometries, in addition to resolving the large deformation and dynamics of individual blood cell with high fidelity. Different simulation components are seamlessly integrated into the present methodology that can simultaneously model stationary rigid boundaries of arbitrary and complex shape, moving rigid bodies, and highly deformable interfaces of blood cells that are governed by non-linear elasticity. This permits physiologically realistic simulations of blood cells flowing in complex microvascular networks characterized by multiple bifurcating and merging vessels. The methodology is validated against analytical theory, experimental data, and previous numerical results. We then demonstrate the capabilities of the methodology by simulating deformable blood cells and heterogeneous cell suspensions flowing in both physiologically realistic microvascular networks and geometrically intricate microfluidic devices. The methodology offers the potential of scaling up to large microvascular networks at organ levels. Funded by NSF CBET 1604308.
Numerical Modeling of Exploitation Relics and Faults Influence on Rock Mass Deformations
NASA Astrophysics Data System (ADS)
Wesołowski, Marek
2016-12-01
This article presents numerical modeling results of fault planes and exploitation relics influenced by the size and distribution of rock mass and surface area deformations. Numerical calculations were performed using the finite difference program FLAC. To assess the changes taking place in a rock mass, an anisotropic elasto-plastic ubiquitous joint model was used, into which the Coulomb-Mohr strength (plasticity) condition was implemented. The article takes as an example the actual exploitation of the longwall 225 area in the seam 502wg of the "Pokój" coal mine. Computer simulations have shown that it is possible to determine the influence of fault planes and exploitation relics on the size and distribution of rock mass and its surface deformation. The main factor causing additional deformations of the area surface are the abandoned workings in the seam 502wd. These abandoned workings are the activation factor that caused additional subsidences and also, due to the significant dip, they are a layer on which the rock mass slides down in the direction of the extracted space. These factors are not taken into account by the geometrical and integral theories.
Modeling Large-Strain, High-Rate Deformation in Metals
Lesuer, D R; Kay, G J; LeBlanc, M M
2001-07-20
The large strain deformation response of 6061-T6 and Ti-6Al-4V has been evaluated over a range in strain rates from 10{sup -4} s{sup -1} to over 10{sup 4} s{sup -1}. The results have been used to critically evaluate the strength and damage components of the Johnson-Cook (JC) material model. A new model that addresses the shortcomings of the JC model was then developed and evaluated. The model is derived from the rate equations that represent deformation mechanisms active during moderate and high rate loading. Another model that accounts for the influence of void formation on yield and flow behavior of a ductile metal (the Gurson model) was also evaluated. The characteristics and predictive capabilities of these models are reviewed.
Procedures for Geometric Data Reduction in Solid Log Modelling
Luis G. Occeña; Wenzhen Chen; Daniel L. Schmoldt
1995-01-01
One of the difficulties in solid log modelling is working with huge data sets, such as those that come from computed axial tomographic imaging. Algorithmic procedures are described in this paper that have successfully reduced data without sacrificing modelling integrity.
Matrix model description of baryonic deformations
Bena, Iosif; Murayama, Hitoshi; Roiban, Radu; Tatar, Radu
2003-03-13
We investigate supersymmetric QCD with N{sub c} + 1 flavors using an extension of the recently proposed relation between gauge theories and matrix models.The impressive agreement between the two sides provides a beautiful confirmation of the extension of the gauge theory-matrix model relation to this case.
Observation of Schramm-Loewner evolution on the geometrical clusters of the Ising model
NASA Astrophysics Data System (ADS)
Najafi, M. N.
2015-05-01
Schramm-Loewner Evolution (SLE) is a stochastic process that, by focusing on the geometrical features of the two-dimensional (2D) conformal invariant models, classifies them using one real parameter κ. In this work we apply the SLE formalism to the exterior frontiers of the geometrical clusters (interfaces) of the two-dimensional critical Ising model on the triangular lattice. We first analyze the critical curves going from the real axis to the real axis in the upper half plane geometry and show numerically that SLE(κ, κ - 6) works well to extract the diffusivity parameter κ. We then analyze the conformal loops of the critical Ising model. After determining some geometrical exponents of the critical loops as the interfaces of the model in hand, we address the problem of application of SLE to conformal loops. We numerically show that SLE(κ, κ - 6) is more reliable than previous methods.
Modeling deformation behavior of the baseball.
Nicholls, Rochelle Llewelyn; Miller, Karol; Elliott, Bruce C
2005-02-01
Regulating ball response to impact is one way to control ball exit velocity in baseball. This is necessary to reduce injuries to defensive players and maintain the balance between offense and defense in the game. This paper presents a model for baseball velocity-dependent behavior. Force-displacement data were obtained using quasi-static compression tests to 50% of ball diameter (n = 70 baseballs). The force-displacement curves for a very stiff baseball (Model B) and a softer type (Model C) were characterized by a Mooney-Rivlin model using implicit finite element analysis (ANSYS software, version 6.1). Agreement between experimental and numerical results was excellent for both Model B (C(10) = 0, C(01) = 3.7e(6) Pa) and Model C (C(10) = 0, C(01) = 2.6e(6) Pa). However, this material model was not available in the ANSYS/LSDYNA explicit dynamic software (version 6.1) used to quantify the transient behavior of the ball. Therefore the modeling process was begun again using a linear viscoelastic material. G(infinity), the long-term shear modulus of the material, was determined by the same implicit FEA procedure. Explicit FEA was used to quantify the time-dependent response of each ball in terms of instantaneous shear modulus (G0) and a decay term (beta). The results were evaluated with respect to published experimental data for the ball coefficient of restitution at five velocities (13.4-40.2 ms(-1)) and were in agreement with the experimental values. The model forms the basis for future research on baseball response to impact with the bat.
Storm Tracks and Barotropic Deformation in Climate Models.
NASA Astrophysics Data System (ADS)
Black, Robert X.; Dole, Randall M.
2000-08-01
The relationship between the time-mean planetary-scale deformation field and the structure of midlatitude storm tracks is studied in wintertime simulations of the National Center for Atmospheric Research (NCAR) Community Climate Model and the National Aeronautics and Space Administration (NASA) Goddard Earth Observing System model. Model biases are determined by contrasting model simulations (forced by observed SSTs) with parallel analyses of NCEP-NCAR reanalyses. Barotropic diagnostics are employed to identify potential dynamical linkages between regional biases in the midlatitude storm tracks and the horizontal deformation field. Initial observational analyses confirm that synoptic eddies are optimally configured to transfer kinetic energy to the mean flow in the jet exit regions, where strong stretching deformation exists. In these regions, the major axes of the synoptic eddies are aligned along the dilatation axes of the mean flow. Consequently, mean flow advection stretches synoptic eddies along their major axes, thereby increasing their anisotropy and weakening their kinetic energy.A strong link is identified between model biases in the horizontal structure of the midlatitude storm tracks and the representation of upper-tropospheric barotropic deformation. In particular, model-simulated storm tracks extend too far downstream in regions where the zonal stretching deformation (associated with horizontal diffluence in jet exit regions) is either too weak in magnitude or displaced westward in comparison with observations. These biases are associated with anomalously weak or westward-displaced patterns of negative barotropic energy conversions, which normally act as a sink of synoptic eddy activity in the jet exit. The anomalous energy conversion patterns are primarily due to model biases in the winter-mean flow rather than the simulated horizontal eddy structures, which closely resemble observations.The results indicate that the horizontal structure of
Target Recognition Using Neural Networks for Model Deformation Measurements
NASA Technical Reports Server (NTRS)
Ross, Richard W.; Hibler, David L.
1999-01-01
Optical measurements provide a non-invasive method for measuring deformation of wind tunnel models. Model deformation systems use targets mounted or painted on the surface of the model to identify known positions, and photogrammetric methods are used to calculate 3-D positions of the targets on the model from digital 2-D images. Under ideal conditions, the reflective targets are placed against a dark background and provide high-contrast images, aiding in target recognition. However, glints of light reflecting from the model surface, or reduced contrast caused by light source or model smoothness constraints, can compromise accurate target determination using current algorithmic methods. This paper describes a technique using a neural network and image processing technologies which increases the reliability of target recognition systems. Unlike algorithmic methods, the neural network can be trained to identify the characteristic patterns that distinguish targets from other objects of similar size and appearance and can adapt to changes in lighting and environmental conditions.
Geometric critical exponent inequalities for general random cluster models
NASA Astrophysics Data System (ADS)
Tasaki, Hal
1987-11-01
A set of new critical exponent inequalities, d(1 -1 / δ)≥2 - η, dv(1 - 1/ δ)≥ γ, and dμ> 1, is proved for a general class of random cluster models, which includes (independent or dependent) percolations, lattice animals (with any interactions), and various stochastic cluster growth models. The inequalities imply that the critical phenomena in the models are inevitably not mean-field-like in the dimensions one, two, and three.
Littelmann path model for geometric crystals, Whittaker functions on Lie groups and Brownian motion
NASA Astrophysics Data System (ADS)
Chhaibi, Reda
2013-02-01
Generally speaking, this thesis focuses on the interplay between the representations of Lie groups and probability theory. It subdivides into essentially three parts. In a first rather algebraic part, we construct a path model for geometric crystals in the sense of Berenstein and Kazhdan, for complex semi-simple Lie groups. We will mainly describe the algebraic structure, its natural morphisms and parameterizations. The theory of total positivity will play a particularly important role. Then, we anticipate on the probabilistic part by exhibiting a canonical measure on geometric crystals. It uses as ingredients the superpotential for the flag manifold and a measure invariant under the crystal actions. The image measure under the weight map plays the role of Duistermaat-Heckman measure. Its Laplace transform defines Whittaker functions, providing an interesting formula for all Lie groups. Then it appears clearly that Whittaker functions are to geometric crystals, what characters are to combinatorial crystals. The Littlewood-Richardson rule is also exposed. Finally we present the probabilistic approach that allows to find the canonical measure. It is based on the fundamental idea that the Wiener measure will induce the adequate measure on the algebraic structures through the path model. In the last chapter, we show how our geometric model degenerates to the continuous classical Littelmann path model and thus recover known results. For example, the canonical measure on a geometric crystal of highest weight degenerates into a uniform measure on a polytope, and recovers the parameterizations of continuous crystals.
On the Use of Geometric Modeling to Predict Aortic Aneurysm Rupture.
Muluk, Sruthi L; Muluk, Pallavi D; Shum, Judy; Finol, Ender A
2017-10-01
Currently, the risk of abdominal aortic aneurysm (AAA) rupture is determined using the maximum diameter (Dmax) of the aorta. We sought in this study to identify a set of computed tomography (CT)-based geometric parameters that would better predict the risk of rupture than Dmax. We obtained CT scans from 180 patients (90 ruptured AAA and 90 elective AAA repair) and then used automated software to calculate 1- , 2- , and 3-dimensional geometric parameters for each AAA. Linear regression was used to identify univariate correlates of membership in the rupture group. We then used stepwise backward elimination to generate a logistic regression model for prediction of rupture. Linear regression identified 40 correlates of rupture. Following stepwise backward elimination, we developed a multivariate logistic regression model containing 15 geometric parameters, including Dmax. This model was compared with a model containing Dmax alone. The multivariate model correctly classified 98% of all cases, whereas the Dmax-only model correctly classified 72% of cases. Receiver operating characteristic analysis showed that the multivariate model had an area under the curve of 0.995, as compared with 0.770 for the Dmax-only model. This difference was highly significant (P < 0.0001). This study demonstrates that a multivariable model using geometric factors entirely measurable from CT scanning can be a better predictor of AAA rupture than maximum diameter alone. Copyright © 2017 Elsevier Inc. All rights reserved.
Human supervisory approach to modeling industrial scenes using geometric primitives
Luck, J.P.; Little, C.Q.; Roberts, R.S.
1997-11-19
A three-dimensional world model is crucial for many robotic tasks. Modeling techniques tend to be either fully manual or autonomous. Manual methods are extremely time consuming but also highly accurate and flexible. Autonomous techniques are fast but inflexible and, with real-world data, often inaccurate. The method presented in this paper combines the two, yielding a highly efficient, flexible, and accurate mapping tool. The segmentation and modeling algorithms that compose the method are specifically designed for industrial environments, and are described in detail. A mapping system based on these algorithms has been designed. It enables a human supervisor to quickly construct a fully defined world model from unfiltered and unsegmented real-world range imagery. Examples of how industrial scenes are modeled with the mapping system are provided.
Gauged spinning models with deformed supersymmetry
NASA Astrophysics Data System (ADS)
Fedoruk, Sergey; Ivanov, Evgeny
2016-11-01
New models of the SU(2|1) supersymmetric mechanics based on gauging the systems with dynamical ( 1, 4, 3) and semi-dynamical ( 4, 4, 0) supermultiplets are presented. We propose a new version of SU(2|1) harmonic superspace approach which makes it possible to construct the Wess-Zumino term for interacting ( 4, 4, 0) multiplets. A new {N}=4 extension of d = 1 Calogero-Moser multiparticle system is obtained by gauging the U( n) isometry of matrix SU(2|1) harmonic superfield model.
Videogrammetric Model Deformation Measurement Technique for Wind Tunnel Applications
NASA Technical Reports Server (NTRS)
Barrows, Danny A.
2006-01-01
Videogrammetric measurement technique developments at NASA Langley were driven largely by the need to quantify model deformation at the National Transonic Facility (NTF). This paper summarizes recent wind tunnel applications and issues at the NTF and other NASA Langley facilities including the Transonic Dynamics Tunnel, 31-Inch Mach 10 Tunnel, 8-Ft high Temperature Tunnel, and the 20-Ft Vertical Spin Tunnel. In addition, several adaptations of wind tunnel techniques to non-wind tunnel applications are summarized. These applications include wing deformation measurements on vehicles in flight, determining aerodynamic loads based on optical elastic deformation measurements, measurements on ultra-lightweight and inflatable space structures, and the use of an object-to-image plane scaling technique to support NASA s Space Exploration program.
2011-06-17
validation before prototyping. This serialized optimization process provides critical CAE support for NVH assessment to the designer during the...requiring a comprehensive geometric description. They can be used to optimize the architecture layout of a vehicle, conduct iterative design studies...Once the concept vehicle model meets the minimum requirements, detailed models should be developed for localized optimization and final design
Models for determining the geometrical properties of halo coronal mass ejections
NASA Astrophysics Data System (ADS)
Zhao, X.; Liu, Y.
2005-12-01
To this day, the prediction of space weather effects near the Earth suffer from a fundamental problem: the necessary condition for determining whether or not and when a part of the huge interplanetary counterpart (ICME) of frontside halo coronal mass ejections (CMEs) is able to hit the Earth and generate goemagnetic storms, i.e., the real angular width, the propagation direction and speed of the CMEs, cannot be measured directly because of the unfavorable geometry. To inverse these geometrical and kinematical properties we have recently developed a few geometrical models, such as the cone model, the ice cream cone model, and the spherical cone model. The inversing solution of the cone model for the 12 may 1997 halo CME has been used as an input to the ENLIL model (a 3D MHD solar wind code) and successfully predicted the ICME near the Earth (Zhao, Plukett & Liu, 2002; Odstrcil, Riley & Zhao, 2004). After briefly describing the geometrical models this presentation will discuss: 1. What kind of halo CMEs can be inversed? 2. How to select the geometrical models given a specific halo CME? 3. Whether or not the inversing solution is unique?
Deformable part models for object detection in medical images
2014-01-01
Background Object detection in 3-D medical images is often necessary for constraining a segmentation or registration task. It may be a task in its own right as well, when instances of a structure, e.g. the lymph nodes, are searched. Problems from occlusion, illumination and projection do not arise, making the problem simpler than object detection in photographies. However, objects of interest are often not well contrasted against the background. Influence from noise and other artifacts is much stronger and shape and appearance may vary substantially within a class. Methods Deformable models capture the characteristic shape of an anatomic object and use constrained deformation for hypothesing object boundaries in image regions of low or non-existing contrast. Learning these constraints requires a large sample data base. We show that training may be replaced by readily available user knowledge defining a prototypical deformable part model. If structures have a strong part-relationship, or if they may be found based on spatially related guiding structures, or if the deformation is rather restricted, the supporting data information suffices for solving the detection task. We use a finite element model to represent anatomic variation by elastic deformation. Complex shape variation may be represented by a hierarchical model with simpler part variation. The hierarchy may be represented explicitly as a hierarchy of sub-shapes, or implicitly by a single integrated model. Data support and model deformation of the complete model can be represented by an energy term, serving as quality-of-fit function for object detection. Results The model was applied to detection and segmentation tasks in various medical applications in 2- and 3-D scenes. It has been shown that model fitting and object detection can be carried out efficiently by a combination of a local and global search strategy using models that are parameterized for the different tasks. Conclusions A part-based elastic
Gérard, Maxime; Michaud, François; Bigot, Alexandre; Tang, An; Soulez, Gilles; Kadoury, Samuel
2017-06-01
Modulating the chemotherapy injection rate with regard to blood flow velocities in the tumor-feeding arteries during intra-arterial therapies may help improve liver tumor targeting while decreasing systemic exposure. These velocities can be obtained noninvasively using Doppler ultrasound (US). However, small vessels situated in the liver are difficult to identify and follow in US. We propose a multimodal fusion approach that non-rigidly registers a 3D geometric mesh model of the hepatic arteries obtained from preoperative MR angiography (MRA) acquisitions with intra-operative 3D US imaging. The proposed fusion tool integrates 3 imaging modalities: an arterial MRA, a portal phase MRA and an intra-operative 3D US. Preoperatively, the arterial phase MRA is used to generate a 3D model of the hepatic arteries, which is then non-rigidly co-registered with the portal phase MRA. Once the intra-operative 3D US is acquired, we register it with the portal MRA using a vessel-based rigid initialization followed by a non-rigid registration using an image-based metric based on linear correlation of linear combination. Using the combined non-rigid transformation matrices, the 3D mesh model is fused with the 3D US. 3D US and multi-phase MRA images acquired from 10 porcine models were used to test the performance of the proposed fusion tool. Unimodal registration of the MRA phases yielded a target registration error (TRE) of [Formula: see text] mm. Initial rigid alignment of the portal MRA and 3D US yielded a mean TRE of [Formula: see text] mm, which was significantly reduced to [Formula: see text] mm ([Formula: see text]) after affine image-based registration. The following deformable registration step allowed for further decrease of the mean TRE to [Formula: see text] mm. The proposed tool could facilitate visualization and localization of these vessels when using 3D US intra-operatively for either intravascular or percutaneous interventions to avoid vessel perforation.
A New Model for Episodic Caldera Deformation at Yellowstone
NASA Astrophysics Data System (ADS)
Cervelli, P. F.; Gervais, S. M.; Lowenstern, J. B.; Wicks, C. W.
2012-12-01
For nearly 90 years, geodetic measurements at Yellowstone have shown recurring episodes of uplift and subsidence confined mostly to the caldera but also extending into the Norris Geyser Basin. The most recent such episode began in late 2004 with the onset of caldera-wide uplift that continued for about 5 years before switching to subsidence in late 2009. The physical mechanism driving the deformation is unknown, though several researchers have proposed kinematic models that can reproduce the observed data. The "Lake" earthquake swarm, which occurred in the northern part of Yellowstone Lake from December 2008 through January 2009, provides a new constraint on caldera deformation models. The timing of the swarm correlates with an abrupt change in local deformation, which preceded the gradual transition from uplift to subsidence in late 2009. Thus, caldera deformation, at least in the vicinity of Yellowstone Lake, consists of two (or more) distinct parts, implying the existence of two (or more) distinct deformation sources. This fresh information leads us to propose a new kinematic model for deformation at Yellowstone, which we develop from the last 15 years of continuous GPS and InSAR data. Our new model consists of three deformation sources: (1) a cauldron block source that is subject to a constant displacement at its base while its surrounding ring fault remains locked; (2) a pressurizing (or depressurizing) spherical cavity near the Norris Geyser Basin, which is known to deform separately from the caldera; and (3) a pressurizing (or depressurizing) spherical cavity at the Sour Creek Dome, which we infer from the abrupt change in deformation rate after the Lake Swarm. We use the GPS and InSAR data from the period of strongest signal, summer 2005 through summer 2007, to optimize the geometry of the three sources: the locations and depths of the spherical cavity, and the perimeter of the cauldron block. We then, while holding their geometry fixed, estimate the
Large deformations of reconfigurable active membranes: a finite element model
NASA Astrophysics Data System (ADS)
Son, Seyul; Goulbourne, N. C.
2010-04-01
In this paper, a finite element model is used to describe the inhomogeneous deformations of dielectric elastomers (DE). In our previous work, inhomogeneous deformations of the DE with simple boundary conditions represented by a system of highly nonlinear coupled differential equations (ordinary and partial) were solved using numerical approaches [1-3]. To solve for the electromechanical response for complex shapes (asymmetric), nonuniform loading, and complex boundary conditions a finite element scheme is required. This paper describes a finite element implementation of the DE material model proposed in our previous work in a commercial FE code (ABAQUS 6.8-1, PAWTUCKET, R.I, USA). The total stress is postulated as the summation of the elastic stress tensor and the Maxwell stress tensor, or more generally the electrostatic stress tensor. The finite element model is verified by analytical solutions and experimental results for planar membrane extensions subject to mechanical loads and an electric field: (i) equibiaxial extension and (ii) generalized biaxial extension. Specifically, the analytical solutions for equibiaxial extension of the DE is obtained by combining a modified large deformation membrane theory that accounts for the electromechanical coupling effect in actuation commonly referred to as the Maxwell stress [4]. A Mooney-Rivlin strain energy function is employed to describe the constitutive stress strain behavior of the DE. For the finite element implementation, the constitutive relationships from our previously proposed mathematical model [4] are implemented into the finite element code. Experimentally, a 250% equibiaxially prestretched DE sample is attached to a rigid joint frame and inhomogeneous deformations of the reconfigurable DE are observed with respect to mechanical loads and an applied electric field. The computational result for the reconfigurable DE is compared with the test result to validate the accuracy and robustness of the finite
Volumetric intraoperative brain deformation compensation: model development and phantom validation.
DeLorenzo, Christine; Papademetris, Xenophon; Staib, Lawrence H; Vives, Kenneth P; Spencer, Dennis D; Duncan, James S
2012-08-01
During neurosurgery, nonrigid brain deformation may affect the reliability of tissue localization based on preoperative images. To provide accurate surgical guidance in these cases, preoperative images must be updated to reflect the intraoperative brain. This can be accomplished by warping these preoperative images using a biomechanical model. Due to the possible complexity of this deformation, intraoperative information is often required to guide the model solution. In this paper, a linear elastic model of the brain is developed to infer volumetric brain deformation associated with measured intraoperative cortical surface displacement. The developed model relies on known material properties of brain tissue, and does not require further knowledge about intraoperative conditions. To provide an initial estimation of volumetric model accuracy, as well as determine the model's sensitivity to the specified material parameters and surface displacements, a realistic brain phantom was developed. Phantom results indicate that the linear elastic model significantly reduced localization error due to brain shift, from > 16 mm to under 5 mm, on average. In addition, though in vivo quantitative validation is necessary, preliminary application of this approach to images acquired during neocortical epilepsy cases confirms the feasibility of applying the developed model to in vivo data.
Sensitivity analysis of geometric errors in additive manufacturing medical models.
Pinto, Jose Miguel; Arrieta, Cristobal; Andia, Marcelo E; Uribe, Sergio; Ramos-Grez, Jorge; Vargas, Alex; Irarrazaval, Pablo; Tejos, Cristian
2015-03-01
Additive manufacturing (AM) models are used in medical applications for surgical planning, prosthesis design and teaching. For these applications, the accuracy of the AM models is essential. Unfortunately, this accuracy is compromised due to errors introduced by each of the building steps: image acquisition, segmentation, triangulation, printing and infiltration. However, the contribution of each step to the final error remains unclear. We performed a sensitivity analysis comparing errors obtained from a reference with those obtained modifying parameters of each building step. Our analysis considered global indexes to evaluate the overall error, and local indexes to show how this error is distributed along the surface of the AM models. Our results show that the standard building process tends to overestimate the AM models, i.e. models are larger than the original structures. They also show that the triangulation resolution and the segmentation threshold are critical factors, and that the errors are concentrated at regions with high curvatures. Errors could be reduced choosing better triangulation and printing resolutions, but there is an important need for modifying some of the standard building processes, particularly the segmentation algorithms. Copyright © 2015 IPEM. Published by Elsevier Ltd. All rights reserved.
Optimization of absorption placement using geometrical acoustic models and least squares.
Saksela, Kai; Botts, Jonathan; Savioja, Lauri
2015-04-01
Given a geometrical model of a space, the problem of optimally placing absorption in a space to match a desired impulse response is in general nonlinear. This has led some to use costly optimization procedures. This letter reformulates absorption assignment as a constrained linear least-squares problem. Regularized solutions result in direct distribution of absorption in the room and can accommodate multiple frequency bands, multiple sources and receivers, and constraints on geometrical placement of absorption. The method is demonstrated using a beam tracing model, resulting in the optimal absorption placement on the walls and ceiling of a classroom.
Evolution of Geometric Sensitivity Derivatives from Computer Aided Design Models
NASA Technical Reports Server (NTRS)
Jones, William T.; Lazzara, David; Haimes, Robert
2010-01-01
The generation of design parameter sensitivity derivatives is required for gradient-based optimization. Such sensitivity derivatives are elusive at best when working with geometry defined within the solid modeling context of Computer-Aided Design (CAD) systems. Solid modeling CAD systems are often proprietary and always complex, thereby necessitating ad hoc procedures to infer parameter sensitivity. A new perspective is presented that makes direct use of the hierarchical associativity of CAD features to trace their evolution and thereby track design parameter sensitivity. In contrast to ad hoc methods, this method provides a more concise procedure following the model design intent and determining the sensitivity of CAD geometry directly to its respective defining parameters.
A geometric view of adaptive optics control: boiling atmosphere model
NASA Astrophysics Data System (ADS)
Wiberg, Donald M.; Max, Claire E.; Gavel, Donald T.
2004-10-01
The separation principle of optimal adaptive optics control is derived, and definitions of controllability and observability are introduced. An exact finite dimensional state space representation of the control system dynamics is obtained without the need for truncation in modes such as Zernikes. The uncertainty of sensing uncontrollable modes confuses present adaptive optics controllers. This uncertainty can be modeled by a Kalman filter. Reducing this uncertainty permits increased gain, increasing the Strehl, which is done by an optimal control law derived here. A general model of the atmosphere is considered, including boiling.
Probabilistic Cross-matching of Radio Catalogs with Geometric Models
NASA Astrophysics Data System (ADS)
Fan, D.; Budavári, T.
2014-05-01
Cross-matching radio is different from that in the optical. Radio sources can have multiple corresponding detections, the core and its lobes, which makes identification and cross-identification to other catalogs much more difficult. Traditionally, these cases have been handled manually, with researchers looking at the possible candidates; this will not be possible for the upcoming radio ultimately leading to the Square Kilometer Array. We present a probabilistic method that can automatically associate radio sources by explicitly modeling their morphology. Our preliminary results based on a simple straight-line model seem to be on par with the manual associations.
Building accurate geometric models from abundant range imaging information
Diegert, C.; Sackos, J.; Nellums, R.
1997-05-01
The authors define two simple metrics for accuracy of models built from range imaging information. They apply the metric to a model built from a recent range image taken at the Laser Radar Development and Evaluation Facility (LDERF), Eglin AFB, using a Scannerless Range Imager (SRI) from Sandia National Laboratories. They also present graphical displays of the residual information produced as a byproduct of this measurement, and discuss mechanisms that these data suggest for further improvement in the performance of this already impressive SRI.
Meso-Scale Modeling of Polycrystal Deformation
NASA Astrophysics Data System (ADS)
Lim, Hojun
Computational material modeling of material is essential to accelerate material/process design and reduce costs in wide variety of applications. In particular, multi-scale models are gaining momentum in many fields as computers become faster, and finer structures become accessible experimentally. An effective (i.e. sufficiently accurate and fast to have practical impact) multi-scale model of dislocation-based metal plasticity may have many important applications such as metal forming. A two-scale method to predict quantitatively the Hall-Petch effect, as well as dislocation densities and lattice curvatures throughout a polycrystal, has been developed and implemented. Based on a finite element formulation, the first scale is called a Grain-Scale Simulation (GSS) that is standard except for using novel single-crystal constitutive equations that were proposed and tested as part of this work (and which are informed from the second model scale). The GSS allows the determination of local stresses, strains, and slip magnitudes while enforcing compatibility and equilibrium throughout a polycrystal in a finite element sense. The second scale is called here a Meso-Scale Simulation (MSS) which is novel in concept and application. It redistributes the mobile part of the dislocation density within grains consistent with the plastic strain distribution, and enforces slip transmission criteria at grain boundaries that depend on local grain and boundary properties. Stepwise simulation at the two scales proceeds sequentially in order to predict the spatial distribution of dislocation density and the flow stress for each slip system within each grain, and each simulation point. The MSS was formulated with the minimum number of undermined or arbitrary parameters, three. Two of these are related to the shape of the strain hardening curve and the other represents the initial yield. These parameters do not invoke additional length scales. The new model made possible the following
Volumetric Intraoperative Brain Deformation Compensation: Model Development and Phantom Validation
DeLorenzo, Christine; Papademetris, Xenophon; Staib, Lawrence H.; Vives, Kenneth P.; Spencer, Dennis D.; Duncan, James S.
2012-01-01
During neurosurgery, nonrigid brain deformation may affect the reliability of tissue localization based on preoperative images. To provide accurate surgical guidance in these cases, preoperative images must be updated to reflect the intraoperative brain. This can be accomplished by warping these preoperative images using a biomechanical model. Due to the possible complexity of this deformation, intraoperative information is often required to guide the model solution. In this paper, a linear elastic model of the brain is developed to infer volumetric brain deformation associated with measured intraoperative cortical surface displacement. The developed model relies on known material properties of brain tissue, and does not require further knowledge about intraoperative conditions. To provide an initial estimation of volumetric model accuracy, as well as determine the model’s sensitivity to the specified material parameters and surface displacements, a realistic brain phantom was developed. Phantom results indicate that the linear elastic model significantly reduced localization error due to brain shift, from >16 mm to under 5 mm, on average. In addition, though in vivo quantitative validation is necessary, preliminary application of this approach to images acquired during neocortical epilepsy cases confirms the feasibility of applying the developed model to in vivo data. PMID:22562728
NASA Astrophysics Data System (ADS)
Ukass, J.; Saks, T.; Popovs, K.
2012-04-01
In present study we attempt to verify the 3D geological model, which has been built on a variety of heterogeneous data sources for the Baltic Basin (BB). Data describing the displacement along the faults and associated thickness changes of the syntectonic strata is sparse and reflects only regional relevance (Brangulis & Konsins 2002). Borehole logs provide most reliable and comprehensive data source for reconstructing the structural geology of the Latvia sedimentary cover as sufficient quality seismic data is available only for the local scale structures. Based on the thickness analysis of the boreholes rough resolution 3D geological tectonic block model was developed to deconstruct the geological structure of the Latvia Caledonian sedimentary sequence. MOSYS modeling system was used for the geological structure modeling, developed within the PUMA project (Sennikovs et al, 2011). Algorithmic genetic approach was applied to interpolate data of well logs as strata volume and sequentially to reconstruct the post-deformation situation. This approach allows modifying model construction in any step and all processes are fully documented and are repeatable. Geometrical model consists of 33 tectonic blocks bordered by the faults which were distributed by interpreting displacement amount of the blocks along the faults providing an opportunity to characterize common tectonic evolution. The study results indicate insignificant thickness change of the Ordovician and Silurian strata along the faults suggesting that major slip event along the faults occurred during the late Silurian and early Devonian, and some secondary fault reactivation during the middle Devonian Narva time. Uplift of the territory during this time is confirmed by the presence of the regional unconformity. Constructed rough resolution 3D geometrical model suggests shortening along the horizontal axis approximately 10 - 20% but most of the shortening has occurred in the central-west part of Latvia where it
A geometric modeler based on a dual-geometry representation polyhedra and rational b-splines
NASA Technical Reports Server (NTRS)
Klosterman, A. L.
1984-01-01
For speed and data base reasons, solid geometric modeling of large complex practical systems is usually approximated by a polyhedra representation. Precise parametric surface and implicit algebraic modelers are available but it is not yet practical to model the same level of system complexity with these precise modelers. In response to this contrast the GEOMOD geometric modeling system was built so that a polyhedra abstraction of the geometry would be available for interactive modeling without losing the precise definition of the geometry. Part of the reason that polyhedra modelers are effective is that all bounded surfaces can be represented in a single canonical format (i.e., sets of planar polygons). This permits a very simple and compact data structure. Nonuniform rational B-splines are currently the best representation to describe a very large class of geometry precisely with one canonical format. The specific capabilities of the modeler are described.
Quantitative comparisons of numerical models of brittle deformation
NASA Astrophysics Data System (ADS)
Buiter, S.
2009-04-01
Numerical modelling of brittle deformation in the uppermost crust can be challenging owing to the requirement of an accurate pressure calculation, the ability to achieve post-yield deformation and localisation, and the choice of rheology (plasticity law). One way to approach these issues is to conduct model comparisons that can evaluate the effects of different implementations of brittle behaviour in crustal deformation models. We present a comparison of three brittle shortening experiments for fourteen different numerical codes, which use finite element, finite difference, boundary element and distinct element techniques. Our aim is to constrain and quantify the variability among models in order to improve our understanding of causes leading to differences between model results. Our first experiment of translation of a stable sand-like wedge serves as a reference that allows for testing against analytical solutions (e.g., taper angle, root-mean-square velocity and gravitational rate of work). The next two experiments investigate an unstable wedge in a sandbox-like setup which deforms by inward translation of a mobile wall. All models accommodate shortening by in-sequence formation of forward shear zones. We analyse the location, dip angle and spacing of thrusts in detail as previous comparisons have shown that these can be highly variable in numerical and analogue models of crustal shortening and extension. We find that an accurate implementation of boundary friction is important for our models. Our results are encouraging in the overall agreement in their dynamic evolution, but show at the same time the effort that is needed to understand shear zone evolution. GeoMod2008 Team: Markus Albertz, Michele Cooke, Susan Ellis, Taras Gerya, Luke Hodkinson, Kristin Hughes, Katrin Huhn, Boris Kaus, Walter Landry, Bertrand Maillot, Christophe Pascal, Anton Popov, Guido Schreurs, Christopher Beaumont, Tony Crook, Mario Del Castello and Yves Leroy
Three-Dimensional Geometric Modeling for Anatomical Structures
Shani, Uri
1981-01-01
Computer analysis of images of anatomical structures can benefit from the use of a priori knowledge about the inspected domain. Even though the anatomy structure of humans is variable, it is far more organized than other domains which are commonly used for image understanding (e.g., outdoor scenes or even images of a boxes-and-cylinders world). This paper discusses an organization scheme for modeling the 3-D structure of the abdominal anatomy and its use for analyzing 3-D CAT (Computed Axial Tomography) scans of the abdomen. The discussion is divided into two major portions of the knowledge organization: a relational database for gross anatomy and a 3-D shape model for individual organs using generalized cylinders. The paper also includes an example of 3-D image analysis for the detection of the kidneys' 3-D shape from abdominal CAT scans.
Geometrical model for the energy of semicoherent interphase interfaces
Ecob, Roger C.; Ralph, Brian
1980-01-01
The basis for the considerations given in this paper is the O-lattice description of crystalline interfaces of Bollmann. In the development of his approach presented here, all possible interfacial planes between two crystal phases having a defined orientation relationship are considered. The energies of these interfaces are then computed in terms of the energies of the primary intrinsic dislocations. A number of modeling interactions are incorporated into this approach, and a better agreement with experimental data is thus obtained. PMID:16592796
NASA Astrophysics Data System (ADS)
Martínez, Fabio; Romero, Eduardo; Dréan, Gaël; Simon, Antoine; Haigron, Pascal; de Crevoisier, Renaud; Acosta, Oscar
2014-03-01
Accurate segmentation of the prostate and organs at risk in computed tomography (CT) images is a crucial step for radiotherapy planning. Manual segmentation, as performed nowadays, is a time consuming process and prone to errors due to the a high intra- and inter-expert variability. This paper introduces a new automatic method for prostate, rectum and bladder segmentation in planning CT using a geometrical shape model under a Bayesian framework. A set of prior organ shapes are first built by applying principal component analysis to a population of manually delineated CT images. Then, for a given individual, the most similar shape is obtained by mapping a set of multi-scale edge observations to the space of organs with a customized likelihood function. Finally, the selected shape is locally deformed to adjust the edges of each organ. Experiments were performed with real data from a population of 116 patients treated for prostate cancer. The data set was split in training and test groups, with 30 and 86 patients, respectively. Results show that the method produces competitive segmentations w.r.t standard methods (averaged dice = 0.91 for prostate, 0.94 for bladder, 0.89 for rectum) and outperforms the majority-vote multi-atlas approaches (using rigid registration, free-form deformation and the demons algorithm).
Martínez, Fabio; Romero, Eduardo; Dréan, Gaël; Simon, Antoine; Haigron, Pascal; De Crevoisier, Renaud; Acosta, Oscar
2014-01-01
Accurate segmentation of the prostate and organs at risk in computed tomography (CT) images is a crucial step for radiotherapy (RT) planning. Manual segmentation, as performed nowadays, is a time consuming process and prone to errors due to the a high intra- and inter-expert variability. This paper introduces a new automatic method for prostate, rectum and bladder segmentation in planning CT using a geometrical shape model under a Bayesian framework. A set of prior organ shapes are first built by applying Principal Component Analysis (PCA) to a population of manually delineated CT images. Then, for a given individual, the most similar shape is obtained by mapping a set of multi-scale edge observations to the space of organs with a customized likelihood function. Finally, the selected shape is locally deformed to adjust the edges of each organ. Experiments were performed with real data from a population of 116 patients treated for prostate cancer. The data set was split in training and test groups, with 30 and 86 patients, respectively. Results show that the method produces competitive segmentations w.r.t standard methods (Averaged Dice = 0.91 for prostate, 0.94 for bladder, 0.89 for Rectum) and outperforms the majority-vote multi-atlas approaches (using rigid registration, free-form deformation (FFD) and the demons algorithm) PMID:24594798
FEMSA: A Finite Element Simulation Tool for Quasi-static Seismic Deformation Modeling
NASA Astrophysics Data System (ADS)
Volpe, M.; Melini, D.; Piersanti, A.
2006-12-01
Modeling postseismic deformation is an increasingly valuable tool in earthquake seismology. In particular, the Finite Element (FE) numerical method allows accurate modeling of complex faulting geometry, inhomogeneous materials and realistic viscous flow, appearing an excellent tool to investigate a lot of specific phenomena related with earthquakes. We developed a FE simulation tool, FEMSA (Finite Element Modeling for Seismic Applications), to model quasi-static deformation generated by faulting sources. The approach allows to automatically implement arbitrary faulting sources and calculate displacement and stress fields induced by slip on the fault. The package makes use of the capabilities of CalculiX, a non commercial FE software designed to solve field problems, and is freely distributed. The main advantages of the method are: reliability, wide diffusion and flexibility, allowing geometrical and/or rheological heterogeneities to be included in a mechanical analysis. We carried out an optimization study on boundary conditions as well as a series of benchmark simulations on test cases and we also verified the capability of our approach to face the presence of 3D heterogeneities within the domain. Here, we present our package and show some simple examples of application.
Physical modeling of geometrically confined disordered protein assemblies
NASA Astrophysics Data System (ADS)
Ando, David
2015-08-01
The transport of cargo across the nuclear membrane is highly selective and accomplished by a poorly understood mechanism involving hundreds of nucleoporins lining the inside of the nuclear pore complex (NPC). Currently, there is no clear picture of the overall structure formed by this collection of proteins within the pore, primarily due to their disordered nature and uncertainty regarding the properties of individual nucleoporins. We first study the defining characteristics of the amino acid sequences of nucleoporins through bioinformatics techniques, although bioinformatics of disordered proteins is especially challenging given high mutation rates for homologous proteins and that functionality may not be strongly related to sequence. Here we have performed a novel bioinformatic analysis, based on the spatial clustering of physically relevant features such as binding motifs and charges within disordered proteins, on thousands of FG motif containing nucleoporins (FG nups). The biophysical mechanism by which the critical FG nups regulate nucleocytoplasmic transport has remained elusive, yet our analysis revealed a set of highly conserved spatial features in the sequence structure of individual FG nups, such as the separation, localization, and ordering of FG motifs and charged residues along the protein chain. These sequence features are likely conserved due to a common functionality between species regarding how FG nups functionally regulate traffic, therefore these results constrain current models and eliminate proposed biophysical mechanisms responsible for regulation of nucleocytoplasmic traffic in the NPC which would not result in such a conserved amino acid sequence structure. Additionally, this method allows us to identify potentially functionally analogous disordered proteins across distantly related species. To understand the physical implications of the sequence features on structure and dynamics of the nucleoporins, we performed coarse-grained simulations
Quantum inverse scattering and the lambda deformed principal chiral model
NASA Astrophysics Data System (ADS)
Appadu, Calan; Hollowood, Timothy J.; Price, Dafydd
2017-07-01
The lambda model is a one parameter deformation of the principal chiral model that arises when regularizing the non-compactness of a non-abelian T dual in string theory. It is a current-current deformation of a WZW model that is known to be integrable at the classical and quantum level. The standard techniques of the quantum inverse scattering method cannot be applied because the Poisson bracket is non ultra-local. Inspired by an approach of Faddeev and Reshetikhin, we show that in this class of models, there is a way to deform the symplectic structure of the theory leading to a much simpler theory that is ultra-local and can be quantized on the lattice whilst preserving integrability. This lattice theory takes the form of a generalized spin chain that can be solved by standard algebraic Bethe Ansatz techniques. We then argue that the IR limit of the lattice theory lies in the universality class of the lambda model implying that the spin chain provides a way to apply the quantum inverse scattering method to this non ultra-local theory. This points to a way of applying the same ideas to other lambda models and potentially the string world-sheet theory in the gauge-gravity correspondence.
Modelling of orbital deformation using finite-element analysis
Al-Sukhun, Jehad; Lindqvist, Christian; Kontio, Risto
2005-01-01
The purpose of this study was to develop a three-dimensional finite-element model (FEM) of the human orbit, containing the globe, to predict orbital deformation in subjects following a blunt injury. This study investigated the hypothesis that such deformation could be modelled using finite-element techniques. One patient who had CT-scan examination to the maxillofacial skeleton including the orbits, as part of her treatment, was selected for this study. A FEM of one of the orbits containing the globe was constructed, based on CT-scan images. Simulations were performed with a computer using the finite-element software NISA (EMRC, Troy, USA). The orbit was subjected to a blunt injury of a 0.5 kg missile with 30 m s−1 velocity. The FEM was then used to predict principal and shear stresses or strains at each node position. Two types of orbital deformation were predicted during different impact simulations: (i) horizontal distortion and (ii) rotational distortion. Stress values ranged from 213.4 to 363.3 MPa for the maximum principal stress, from −327.8 to −653.1 MPa for the minimum principal stress, and from 212.3 to 444.3 MPa for the maximum shear stress. This is the first finite-element study, which demonstrates different and concurrent patterns of orbital deformation in a subject following a blunt injury. Finite element modelling is a powerful and invaluable tool to study the multifaceted phenomenon of orbital deformation. PMID:16849235
Semiautomated four-dimensional computed tomography segmentation using deformable models
Ragan, Dustin; Starkschall, George; McNutt, Todd; Kaus, Michael; Guerrero, Thomas; Stevens, Craig W.
2005-07-15
The purpose of this work is to demonstrate a proof of feasibility of the application of a commercial prototype deformable model algorithm to the problem of delineation of anatomic structures on four-dimensional (4D) computed tomography (CT) image data sets. We acquired a 4D CT image data set of a patient's thorax that consisted of three-dimensional (3D) image data sets from eight phases in the respiratory cycle. The contours of the right and left lungs, cord, heart, and esophagus were manually delineated on the end inspiration data set. An interactive deformable model algorithm, originally intended for deforming an atlas-based model surface to a 3D CT image data set, was applied in an automated fashion. Triangulations based on the contours generated on each phase were deformed to the CT data set on the succeeding phase to generate the contours on that phase. Deformation was propagated through the eight phases, and the contours obtained on the end inspiration data set were compared with the original manually delineated contours. Structures defined by high-density gradients, such as lungs, cord, and heart, were accurately reproduced, except in regions where other gradient boundaries may have confused the algorithm, such as near bronchi. The algorithm failed to accurately contour the esophagus, a soft-tissue structure completely surrounded by tissue of similar density, without manual interaction. This technique has the potential to facilitate contour delineation in 4D CT image data sets; and future evolution of the software is expected to improve the process.
Metallic clusters on a model surface: Quantum versus geometric effects
NASA Astrophysics Data System (ADS)
Blundell, S. A.; Haldar, Soumyajyoti; Kanhere, D. G.
2011-08-01
We determine the structure and melting behavior of supported metallic clusters using an ab initio density-functional-based treatment of intracluster interactions and an approximate treatment of the surface as an idealized smooth plane yielding an effective Lennard-Jones interaction with the ions of the cluster. We apply this model to determine the structure of sodium clusters containing from 4 to 22 atoms, treating the cluster-surface interaction strength as a variable parameter. For a strong cluster-surface interaction, the clusters form two-dimensional (2D) monolayer structures; comparisons with calculations of structure and dissociation energy performed with a classical Gupta interatomic potential show clearly the role of quantum shell effects in the metallic binding in this case, and evidence is presented that these shell effects correspond to those for a confined 2D electron gas. The thermodynamics and melting behavior of a supported Na20 cluster is considered in detail using the model for several cluster-surface interaction strengths. We find quantitative differences in the melting temperatures and caloric curve from density-functional and Gupta treatments of the valence electrons. A clear dimensional effect on the melting behavior is also demonstrated, with 2D structures showing melting temperatures above those of the bulk or (at very strong cluster-surface interactions) no clear meltinglike transition.
Analysis of a hyperbolic geometric model for visual texture perception
2011-01-01
We study the neural field equations introduced by Chossat and Faugeras to model the representation and the processing of image edges and textures in the hypercolumns of the cortical area V1. The key entity, the structure tensor, intrinsically lives in a non-Euclidean, in effect hyperbolic, space. Its spatio-temporal behaviour is governed by nonlinear integro-differential equations defined on the Poincaré disc model of the two-dimensional hyperbolic space. Using methods from the theory of functional analysis we show the existence and uniqueness of a solution of these equations. In the case of stationary, i.e. time independent, solutions we perform a stability analysis which yields important results on their behavior. We also present an original study, based on non-Euclidean, hyperbolic, analysis, of a spatially localised bump solution in a limiting case. We illustrate our theoretical results with numerical simulations. AMS subject classifications: 30F45, 33C05, 34A12, 34D20, 34D23, 34G20, 37M05, 43A85, 44A35, 45G10, 51M10, 92B20, 92C20. PMID:22656402
NASA Astrophysics Data System (ADS)
Matsumiya, Kazumichi; Kaneko, Hirohiko
2008-07-01
While an object is approaching a particular location, we can make an estimate of the time when the object will arrive at that location. A geometric model predicts that the estimate of time-to-contact (TTC) is greatly improved by using the rate of change of visual direction of the object when the object is moving with a slow velocity toward a point of nearest approach at a distance far from the observer. It has been shown that pursuit eye movements provide the rate of change of visual direction of an approaching object. We conducted psychophysical experiments, and compared TTC estimates during pursuit eye movements to those during fixation. We found that the differences in TTC estimates between fixation and pursuit show a qualitatively similar pattern to the geometric model prediction. However, the results also show that the magnitudes of the TTC estimation errors are greater than the theoretical values from the geometric model, indicating that the human visual system has a perceptual bias in estimating TTC. These results suggest that the human visual system estimates TTC during pursuit eye movements in a different way from the geometric model, although the effect of these eye movements on TTC estimates in human performance is qualitatively consistent with the model prediction.
Phenomenological model for transient deformation based on state variables
Jackson, M S; Cho, C W; Alexopoulos, P; Mughrabi, H; Li, C Y
1980-01-01
The state variable theory of Hart, while providing a unified description of plasticity-dominated deformation, exhibits deficiencies when it is applied to transient deformation phenomena at stresses below yield. It appears that the description of stored anelastic strain is oversimplified. Consideration of a simple physical picture based on continuum dislocation pileups suggests that the neglect of weak barriers to dislocation motion is the source of these inadequacies. An appropriately modified description incorporating such barriers then allows the construction of a macroscopic model including transient effects. Although the flow relations for the microplastic element required in the new theory are not known, tentative assignments may be made for such functions. The model then exhibits qualitatively correct behavior when tensile, loading-unloading, reverse loading, and load relaxation tests are simulated. Experimental procedures are described for determining the unknown parameters and functions in the new model.
Dynamic deformable models for 3D MRI heart segmentation
NASA Astrophysics Data System (ADS)
Zhukov, Leonid; Bao, Zhaosheng; Gusikov, Igor; Wood, John; Breen, David E.
2002-05-01
Automated or semiautomated segmentation of medical images decreases interstudy variation, observer bias, and postprocessing time as well as providing clincally-relevant quantitative data. In this paper we present a new dynamic deformable modeling approach to 3D segmentation. It utilizes recently developed dynamic remeshing techniques and curvature estimation methods to produce high-quality meshes. The approach has been implemented in an interactive environment that allows a user to specify an initial model and identify key features in the data. These features act as hard constraints that the model must not pass through as it deforms. We have employed the method to perform semi-automatic segmentation of heart structures from cine MRI data.
Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach.
Arrieta, Jorge; Cartwright, Julyan H E; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan
2015-01-01
Mixing fluid in a container at low Reynolds number--in an inertialess environment--is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the "belly phase," peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing.
Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach
Arrieta, Jorge; Cartwright, Julyan H. E.; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan
2015-01-01
Mixing fluid in a container at low Reynolds number— in an inertialess environment—is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the “belly phase,” peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing. PMID:26154384
Algebraic geometrization of the Kuramoto model: Equilibria and stability analysis
NASA Astrophysics Data System (ADS)
Mehta, Dhagash; Daleo, Noah S.; Dörfler, Florian; Hauenstein, Jonathan D.
2015-05-01
Finding equilibria of the finite size Kuramoto model amounts to solving a nonlinear system of equations, which is an important yet challenging problem. We translate this into an algebraic geometry problem and use numerical methods to find all of the equilibria for various choices of coupling constants K, natural frequencies, and on different graphs. We note that for even modest sizes (N ˜ 10-20), the number of equilibria is already more than 100 000. We analyze the stability of each computed equilibrium as well as the configuration of angles. Our exploration of the equilibrium landscape leads to unexpected and possibly surprising results including non-monotonicity in the number of equilibria, a predictable pattern in the indices of equilibria, counter-examples to conjectures, multi-stable equilibrium landscapes, scenarios with only unstable equilibria, and multiple distinct extrema in the stable equilibrium distribution as a function of the number of cycles in the graph.
Polarity-Driven Geometrical Cluster Growth Model of Budding Yeast
NASA Astrophysics Data System (ADS)
Cabral, Reniel B.; Lim, May T.
We present a polarity-driven activator-inhibitor model of budding yeast in a two-dimensional medium wherein impeding metabolites secretion (or growth inhibitors) and growth directionality are determined by the local nutrient level. We found that colony size and morphological features varied with nutrient concentration. A branched-type morphology is associated with high impeding metabolite concentration together with a high fraction of distal budding, while opposite conditions (low impeding metabolite concentration, high fraction of proximal budding) promote Eden-type patterns. Increasing the anisotropy factor (or polarity) produced other spatial patterns akin to the electrical breakdown under varying electric field. Rapid changes in the colony morphology, which we conjecture to be equivalent to a transition from an inactive quiescent state to an active budding state, appeared when nutrients were limited.
Nonlinear geometric effects in mechanical bistable morphing structures.
Chen, Zi; Guo, Qiaohang; Majidi, Carmel; Chen, Wenzhe; Srolovitz, David J; Haataja, Mikko P
2012-09-14
Bistable structures associated with nonlinear deformation behavior, exemplified by the Venus flytrap and slap bracelet, can switch between different functional shapes upon actuation. Despite numerous efforts in modeling such large deformation behavior of shells, the roles of mechanical and nonlinear geometric effects on bistability remain elusive. We demonstrate, through both theoretical analysis and tabletop experiments, that two dimensionless parameters control bistability. Our work classifies the conditions for bistability, and extends the large deformation theory of plates and shells.
Compound dislocation models (CDMs) for volcano deformation analyses
NASA Astrophysics Data System (ADS)
Nikkhoo, Mehdi; Walter, Thomas R.; Lundgren, Paul R.; Prats-Iraola, Pau
2017-02-01
Volcanic crises are often preceded and accompanied by volcano deformation caused by magmatic and hydrothermal processes. Fast and efficient model identification and parameter estimation techniques for various sources of deformation are crucial for process understanding, volcano hazard assessment and early warning purposes. As a simple model that can be a basis for rapid inversion techniques, we present a compound dislocation model (CDM) that is composed of three mutually orthogonal rectangular dislocations (RDs). We present new RD solutions, which are free of artefact singularities and that also possess full rotational degrees of freedom. The CDM can represent both planar intrusions in the near field and volumetric sources of inflation and deflation in the far field. Therefore, this source model can be applied to shallow dikes and sills, as well as to deep planar and equidimensional sources of any geometry, including oblate, prolate and other triaxial ellipsoidal shapes. In either case the sources may possess any arbitrary orientation in space. After systematically evaluating the CDM, we apply it to the co-eruptive displacements of the 2015 Calbuco eruption observed by the Sentinel-1A satellite in both ascending and descending orbits. The results show that the deformation source is a deflating vertical lens-shaped source at an approximate depth of 8 km centred beneath Calbuco volcano. The parameters of the optimal source model clearly show that it is significantly different from an isotropic point source or a single dislocation model. The Calbuco example reflects the convenience of using the CDM for a rapid interpretation of deformation data.
Geometrical and computer modeling of mechanical engineering surfaces products intersection line
NASA Astrophysics Data System (ADS)
Panchuk, K. L.; Kaygorodtseva, N. V.; Kaygorodtseva, T. N.; Yurkov, V. Yu
2017-06-01
In the design and manufacture of engineering products geometrical problem is known by shaping the surface of the product. An important element of general solution of this problem is to define the lines of surfaces intersection, forming the shape of designed product. Existing possibilities of modern CAD systems do not allow achieving fullness of the result in this direction. For example, control points and change point of visibility is difficult to identify in the product drawings. In addition, there are no possibilities of detecting imaginary points which are necessary for a complete analysis of intersection surfaces, and mapping these points in the drawing. The aim of the study is to develop a geometric algorithm of constructive determining the intersection line and is devoid of these shortcomings. The objectives of the study are testing the obtained algorithm by experimental verification with geometric modeling solutions to specific problems by tools CAD. This study adopted the method, which is based on quotient of geometric sets, which are regarded as intersecting surfaces in space E3 . One area of practical use of surface engineering products geometric algorithm - shaping is based on their intersection line.
Multi-Modality Vertebra Recognition in Arbitrary Views Using 3D Deformable Hierarchical Model.
Cai, Yunliang; Osman, Said; Sharma, Manas; Landis, Mark; Li, Shuo
2015-08-01
Computer-aided diagnosis of spine problems relies on the automatic identification of spine structures in images. The task of automatic vertebra recognition is to identify the global spine and local vertebra structural information such as spine shape, vertebra location and pose. Vertebra recognition is challenging due to the large appearance variations in different image modalities/views and the high geometric distortions in spine shape. Existing vertebra recognitions are usually simplified as vertebrae detections, which mainly focuses on the identification of vertebra locations and labels but cannot support further spine quantitative assessment. In this paper, we propose a vertebra recognition method using 3D deformable hierarchical model (DHM) to achieve cross-modality local vertebra location+pose identification with accurate vertebra labeling, and global 3D spine shape recovery. We recast vertebra recognition as deformable model matching, fitting the input spine images with the 3D DHM via deformations. The 3D model-matching mechanism provides a more comprehensive vertebra location+pose+label simultaneous identification than traditional vertebra location+label detection, and also provides an articulated 3D mesh model for the input spine section. Moreover, DHM can conduct versatile recognition on volume and multi-slice data, even on single slice. Experiments show our method can successfully extract vertebra locations, labels, and poses from multi-slice T1/T2 MR and volume CT, and can reconstruct 3D spine model on different image views such as lumbar, cervical, even whole spine. The resulting vertebra information and the recovered shape can be used for quantitative diagnosis of spine problems and can be easily digitalized and integrated in modern medical PACS systems.
NASA Astrophysics Data System (ADS)
Boyer, Frederic; Porez, Mathieu; Renda, Federico
This talk presents recent geometric tools developed to model the locomotion dynamics of bio-inspired robots. Starting from the model of discrete rigid multibody systems we will rapidly shift to the case of continuous systems inspired from snakes and fish. To that end, we will build on the model of Cosserat media. This extended picture of geometric locomotion dynamics (inspired from fields' theory) will allow us to introduce models of swimming recently used in biorobotics. We will show how modeling a fish as a one-dimensional Cosserat medium allows to recover and extend the Large Amplitude Elongated Body theory of J. Lighthill and to apply it to an eel-like robot. In the same vein, modeling the mantle of cephalopods as a two dimensional Cosserat medium will build a basis for studying the jet propelling of a soft octopus like robot.
Simulation of mechanisms modeled by geometrically-exact beams using Rodrigues rotation parameters
NASA Astrophysics Data System (ADS)
Gay Neto, Alfredo
2017-03-01
We present mathematical models for joints, springs, dashpots and follower loads, to be used together with geometrically-exact beam finite elements to simulate mechanisms. The rotations are described using Rodrigues parameters. An updated-Lagrangian approach is employed, leading to the possibility of finite rotations involving many turns, overcoming possible singularities in the rotation tensor. We present formulations for spherical, hinge and universal (Cardan) joints, which are enforced by Lagrange multipliers. For the hinge joint, a torsional spring with a nonlinear damper model is presented. A geometric-nonlinear translational spring/dashpot model is proposed, such as follower loads. All formulations are presented detailing their contribution to the model weak form and tangent operator. These are employed together with implicit time-integration schemes. Numerical examples are performed, showing that the proposed formulations are able to model complex spatial mechanisms. Usage of the models together with contact interaction between beams is explored by a cam/follower mechanism example.
Is there a geometric module for spatial orientation? Insights from a rodent navigation model.
Sheynikhovich, Denis; Chavarriaga, Ricardo; Strösslin, Thomas; Arleo, Angelo; Gerstner, Wulfram
2009-07-01
Modern psychological theories of spatial cognition postulate the existence of a geometric module for reorientation. This concept is derived from experimental data showing that in rectangular arenas with distinct landmarks in the corners, disoriented rats often make diagonal errors, suggesting their preference for the geometric (arena shape) over the nongeometric (landmarks) cues. Moreover, sensitivity of hippocampal cell firing to changes in the environment layout was taken in support of the geometric module hypothesis. Using a computational model of rat navigation, the authors proposed and tested the alternative hypothesis that the influence of spatial geometry on both behavioral and neuronal levels can be explained by the properties of visual features that constitute local views of the environment. Their modeling results suggest that the pattern of diagonal errors observed in reorientation tasks can be understood by the analysis of sensory information processing that underlies the navigation strategy employed to solve the task. In particular, 2 navigation strategies were considered: (a) a place-based locale strategy that relies on a model of grid and place cells and (b) a stimulus-response taxon strategy that involves direct association of local views with action choices. The authors showed that the application of the 2 strategies in the reorientation tasks results in different patterns of diagonal errors, consistent with behavioral data. These results argue against the geometric module hypothesis by providing a simpler and biologically more plausible explanation for the related experimental data. Moreover, the same model also describes behavioral results in different types of water-maze tasks.
Modeling cotton (Gossypium spp) leaves and canopy using computer aided geometric design (CAGD)
USDA-ARS?s Scientific Manuscript database
The goal of this research is to develop a geometrically accurate model of cotton crop canopies for exploring changes in canopy microenvironment and physiological function with leaf structure. We develop an accurate representation of the leaves, including changes in three-dimensional folding and orie...
Modeling of friction-induced deformation and microstructures.
Michael, Joseph Richard; Prasad, Somuri V.; Jungk, John Michael; Cordill, Megan J.; Bammann, Douglas J.; Battaile, Corbett Chandler; Moody, Neville Reid; Majumdar, Bhaskar Sinha (New Mexico Institure of Mining and Technology)
2006-12-01
Frictional contact results in surface and subsurface damage that could influence the performance, aging, and reliability of moving mechanical assemblies. Changes in surface roughness, hardness, grain size and texture often occur during the initial run-in period, resulting in the evolution of subsurface layers with characteristic microstructural features that are different from those of the bulk. The objective of this LDRD funded research was to model friction-induced microstructures. In order to accomplish this objective, novel experimental techniques were developed to make friction measurements on single crystal surfaces along specific crystallographic surfaces. Focused ion beam techniques were used to prepare cross-sections of wear scars, and electron backscattered diffraction (EBSD) and TEM to understand the deformation, orientation changes, and recrystallization that are associated with sliding wear. The extent of subsurface deformation and the coefficient of friction were strongly dependent on the crystal orientation. These experimental observations and insights were used to develop and validate phenomenological models. A phenomenological model was developed to elucidate the relationships between deformation, microstructure formation, and friction during wear. The contact mechanics problem was described by well-known mathematical solutions for the stresses during sliding friction. Crystal plasticity theory was used to describe the evolution of dislocation content in the worn material, which in turn provided an estimate of the characteristic microstructural feature size as a function of the imposed strain. An analysis of grain boundary sliding in ultra-fine-grained material provided a mechanism for lubrication, and model predictions of the contribution of grain boundary sliding (relative to plastic deformation) to lubrication were in good qualitative agreement with experimental evidence. A nanomechanics-based approach has been developed for characterizing the
NASA Astrophysics Data System (ADS)
Vile, Douglas J.
In radiation therapy, interfraction organ motion introduces a level of geometric uncertainty into the planning process. Plans, which are typically based upon a single instance of anatomy, must be robust against daily anatomical variations. For this problem, a model of the magnitude, direction, and likelihood of deformation is useful. In this thesis, principal component analysis (PCA) is used to statistically model the 3D organ motion for 19 prostate cancer patients, each with 8-13 fractional computed tomography (CT) images. Deformable image registration and the resultant displacement vector fields (DVFs) are used to quantify the interfraction systematic and random motion. By applying the PCA technique to the random DVFs, principal modes of random tissue deformation were determined for each patient, and a method for sampling synthetic random DVFs was developed. The PCA model was then extended to describe the principal modes of systematic and random organ motion for the population of patients. A leave-one-out study tested both the systematic and random motion model's ability to represent PCA training set DVFs. The random and systematic DVF PCA models allowed the reconstruction of these data with absolute mean errors between 0.5-0.9 mm and 1-2 mm, respectively. To the best of the author's knowledge, this study is the first successful effort to build a fully 3D statistical PCA model of systematic tissue deformation in a population of patients. By sampling synthetic systematic and random errors, organ occupancy maps were created for bony and prostate-centroid patient setup processes. By thresholding these maps, PCA-based planning target volume (PTV) was created and tested against conventional margin recipes (van Herk for bony alignment and 5 mm fixed [3 mm posterior] margin for centroid alignment) in a virtual clinical trial for low-risk prostate cancer. Deformably accumulated delivered dose served as a surrogate for clinical outcome. For the bony landmark setup
Odenthal, Tim; Smeets, Bart; Van Liedekerke, Paul; Tijskens, Engelbert; Van Oosterwyck, Hans; Ramon, Herman
2013-01-01
Adhesion governs to a large extent the mechanical interaction between a cell and its microenvironment. As initial cell spreading is purely adhesion driven, understanding this phenomenon leads to profound insight in both cell adhesion and cell-substrate interaction. It has been found that across a wide variety of cell types, initial spreading behavior universally follows the same power laws. The simplest cell type providing this scaling of the radius of the spreading area with time are modified red blood cells (RBCs), whose elastic responses are well characterized. Using a mechanistic description of the contact interaction between a cell and its substrate in combination with a deformable RBC model, we are now able to investigate in detail the mechanisms behind this universal power law. The presented model suggests that the initial slope of the spreading curve with time results from a purely geometrical effect facilitated mainly by dissipation upon contact. Later on, the spreading rate decreases due to increasing tension and dissipation in the cell's cortex as the cell spreads more and more. To reproduce this observed initial spreading, no irreversible deformations are required. Since the model created in this effort is extensible to more complex cell types and can cope with arbitrarily shaped, smooth mechanical microenvironments of the cells, it can be useful for a wide range of investigations where forces at the cell boundary play a decisive role. PMID:24146605
Extension of non-linear beam models with deformable cross sections
NASA Astrophysics Data System (ADS)
Sokolov, I.; Krylov, S.; Harari, I.
2015-12-01
Geometrically exact beam theory is extended to allow distortion of the cross section. We present an appropriate set of cross-section basis functions and provide physical insight to the cross-sectional distortion from linear elastostatics. The beam formulation in terms of material (back-rotated) beam internal force resultants and work-conjugate kinematic quantities emerges naturally from the material description of virtual work of constrained finite elasticity. The inclusion of cross-sectional deformation allows straightforward application of three-dimensional constitutive laws in the beam formulation. Beam counterparts of applied loads are expressed in terms of the original three-dimensional data. Special attention is paid to the treatment of the applied stress, keeping in mind applications such as hydrogel actuators under environmental stimuli or devices made of electroactive polymers. Numerical comparisons show the ability of the beam model to reproduce finite elasticity results with good efficiency.
Dislocation models of interseismic deformation in the western United States
Pollitz, F.F.; McCrory, P.; Svarc, J.; Murray, J.
2008-01-01
The GPS-derived crustal velocity field of the western United States is used to construct dislocation models in a viscoelastic medium of interseismic crustal deformation. The interseismic velocity field is constrained by 1052 GPS velocity vectors spanning the ???2500-km-long plate boundary zone adjacent to the San Andreas fault and Cascadia subduction zone and extending ???1000 km into the plate interior. The GPS data set is compiled from U.S. Geological Survey campaign data, Plate Boundary Observatory data, and the Western U.S. Cordillera velocity field of Bennett et al. (1999). In the context of viscoelastic cycle models of postearthquake deformation, the interseismic velocity field is modeled with a combination of earthquake sources on ???100 known faults plus broadly distributed sources. Models that best explain the observed interseismic velocity field include the contributions of viscoelastic relaxation from faulting near the major plate margins, viscoelastic relaxation from distributed faulting in the plate interior, as well as lateral variations in depth-averaged rigidity in the elastic lithosphere. Resulting rigidity variations are consistent with reduced effective elastic plate thickness in a zone a few tens of kilometers wide surrounding the San Andreas fault (SAF) system. Primary deformation characteristics are captured along the entire SAF system, Eastern California Shear Zone, Walker Lane, the Mendocino triple junction, the Cascadia margin, and the plate interior up to ???1000 km from the major plate boundaries.
A large deformation viscoelastic model for double-network hydrogels
NASA Astrophysics Data System (ADS)
Mao, Yunwei; Lin, Shaoting; Zhao, Xuanhe; Anand, Lallit
2017-03-01
We present a large deformation viscoelasticity model for recently synthesized double network hydrogels which consist of a covalently-crosslinked polyacrylamide network with long chains, and an ionically-crosslinked alginate network with short chains. Such double-network gels are highly stretchable and at the same time tough, because when stretched the crosslinks in the ionically-crosslinked alginate network rupture which results in distributed internal microdamage which dissipates a substantial amount of energy, while the configurational entropy of the covalently-crosslinked polyacrylamide network allows the gel to return to its original configuration after deformation. In addition to the large hysteresis during loading and unloading, these double network hydrogels also exhibit a substantial rate-sensitive response during loading, but exhibit almost no rate-sensitivity during unloading. These features of large hysteresis and asymmetric rate-sensitivity are quite different from the response of conventional hydrogels. We limit our attention to modeling the complex viscoelastic response of such hydrogels under isothermal conditions. Our model is restricted in the sense that we have limited our attention to conditions under which one might neglect any diffusion of the water in the hydrogel - as might occur when the gel has a uniform initial value of the concentration of water, and the mobility of the water molecules in the gel is low relative to the time scale of the mechanical deformation. We also do not attempt to model the final fracture of such double-network hydrogels.
NASA Astrophysics Data System (ADS)
Xin, Q.; Gong, P.; Li, W.
2015-02-01
Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT) model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP) for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily time scales. We also demonstrate that the ambient CO2 concentration influences daytime vegetation photosynthesis, which needs to be considered in state-of-the-art biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.
Modeling and analysis methodology for aeroelastically tailored chordwise deformable wings
NASA Technical Reports Server (NTRS)
Rehfield, Lawrence W.; Chang, Stephen; Zischka, Peter J.
1992-01-01
Structural concepts have been created which produce chordwise camber deformation that results in enhanced lift. A wing box can be tailored to utilize each of these with composites. In attempting to optimize the aerodynamic benefits, we have found there are two optimal designs that are of interest. There is a weight optimum which corresponds to the maximum lift per unit structural weight. There is also a lift optimum that corresponds to maximum absolute lift. New structural models, the basic deformation mechanisms that are utilized and typical analytical results are presented. It appears that lift enhancements of sufficient magnitude can be produced to render this type of wing tailoring of practical interest. Experiments and finite element correlations are performed which confirm the validity of the theoretical models utilized.
A skeleton family generator via physics-based deformable models.
Krinidis, Stelios; Chatzis, Vassilios
2009-01-01
This paper presents a novel approach for object skeleton family extraction. The introduced technique utilizes a 2-D physics-based deformable model that parameterizes the objects shape. Deformation equations are solved exploiting modal analysis, and proportional to model physical characteristics, a different skeleton is produced every time, generating, in this way, a family of skeletons. The theoretical properties and the experiments presented demonstrate that obtained skeletons match to hand-labeled skeletons provided by human subjects, even in the presence of significant noise and shape variations, cuts and tears, and have the same topology as the original skeletons. In particular, the proposed approach produces no spurious branches without the need of any known skeleton pruning method.
Modified Sachs's Model of Deformation of Polycrystalline Magnesium
NASA Astrophysics Data System (ADS)
Kesarev, A. G.; Vlasova, A. M.
2017-09-01
There are a large number of approaches to a description of work hardening of metal polycrystals with various crystal lattices. In the present work, Sachs's model is generalized to uniaxial tension/compression of polycrystalline magnesium with hexagonal densely packed crystal lattice. The tensile yield stress is estimated taking into account two deformation modes: (0001)< 11\\overline{2}0> easy basal slip and (10\\overline{1}2)< \\overline{1}011> twinning.
Model Deformation Measurements at a Cryogenic Wind Tunnel Using Photogrammetry
NASA Technical Reports Server (NTRS)
Burner, A. W.; Snow, W. L.; Goad, W. K.
1982-01-01
A photogrammetric closed circuit television system to measure model deformation at the National Transonic Facility (NTF) is described. The photogrammetric approach was chosen because of its inherent rapid data recording of the entire object field. Video cameras are used to acquire data instead of film cameras due to the inaccessibility of cameras which must be housed within the cryogenic, high pressure plenum of this facility. Data reduction procedures and the results of tunnel tests at the NTF are presented.
A geometric graph model for citation networks of exponentially growing scientific papers
NASA Astrophysics Data System (ADS)
Xie, Zheng; Ouyang, Zhenzheng; Liu, Qi; Li, Jianping
2016-08-01
In citation networks, the content relativity of papers is a precondition of engendering citations, which is hard to model by a topological graph. A geometric graph is proposed to predict some features of the citation networks with exponentially growing papers, which addresses the precondition by using coordinates of nodes to model the research contents of papers, and geometric distances between nodes to diversities of research contents between papers. Citations between modeled papers are drawn according to a geometric rule, which addresses the precondition as well as some other factors engendering citations, namely academic influences of papers, aging of those influences, and incomplete copying of references. Instead of cumulative advantage of degree, the model illustrates that the scale-free property of modeled networks arises from the inhomogeneous academic influences of modeled papers. The model can also reproduce some other statistical features of citation networks, e.g. in- and out-assortativities, which show the model provides a suitable tool to understand some aspects of citation networks by geometry.
Model Deformation Measurements at NASA Langley Research Center
NASA Technical Reports Server (NTRS)
Burner, A. W.
1998-01-01
Only recently have large amounts of model deformation data been acquired in NASA wind tunnels. This acquisition of model deformation data was made possible by the development of an automated video photogrammetric system to measure the changes in wing twist and bending under aerodynamic load. The measurement technique is based upon a single view photogrammetric determination of two dimensional coordinates of wing targets with a fixed third dimensional coordinate, namely the spanwise location. A major consideration in the development of the measurement system was that use of the technique must not appreciably reduce wind tunnel productivity. The measurement technique has been used successfully for a number of tests at four large production wind tunnels at NASA and a dedicated system is nearing completion for a fifth facility. These facilities are the National Transonic Facility, the Transonic Dynamics Tunnel, and the Unitary Plan Wind Tunnel at NASA Langley, and the 12-FT Pressure Tunnel at NASA Ames. A dedicated system for the Langley 16-Foot Transonic Tunnel is scheduled to be used for the first time for a test in September. The advantages, limitations, and strategy of the technique as currently used in NASA wind tunnels are presented. Model deformation data are presented which illustrate the value of these measurements. Plans for further enhancements to the technique are presented.
Heavy quark potential from deformed AdS5 models
NASA Astrophysics Data System (ADS)
Zhang, Zi-qiang; Hou, De-fu; Chen, Gang
2017-04-01
In this paper, we investigate the heavy quark potential in some holographic QCD models. The calculation relies on a modified renormalization scheme mentioned in a previous work of Albacete et al. After studying the heavy quark potential in Pirner-Galow model and Andreev-Zakharov model, we extend the discussion to a general deformed AdS5 case. It is shown that the obtained potential is negative definite for all quark-antiquark separations, differs from that using the usual renormalization scheme.
Modeling Permanent Deformations of Superelastic and Shape Memory Materials.
Urbano, Marco Fabrizio; Auricchio, Ferdinando
2015-06-11
In this paper we propose a modification of the polycrystalline shape memory alloy constitutive model originally proposed by Souza. By introducing a transformation strain energy with two different hardening coefficients, we are able to take into account the effect of the martensitic transformation of unfavorably oriented grains occurring after the main plateau. By choosing a proper second hardening coefficient, it is possible to reproduce the correct stress strain behavior of the material after the plateau without the need of introducing a much smaller Young modulus for martensite. The proposed modification is introduced in the model comprising permanent deformation effects. Model results for uniaxial stress tests are compared to experimental results showing good agreement.
Heterogeneous Deformable Modeling of Bio-Tissues and Haptic Force Rendering for Bio-Object Modeling
NASA Astrophysics Data System (ADS)
Lin, Shiyong; Lee, Yuan-Shin; Narayan, Roger J.
This paper presents a novel technique for modeling soft biological tissues as well as the development of an innovative interface for bio-manufacturing and medical applications. Heterogeneous deformable models may be used to represent the actual internal structures of deformable biological objects, which possess multiple components and nonuniform material properties. Both heterogeneous deformable object modeling and accurate haptic rendering can greatly enhance the realism and fidelity of virtual reality environments. In this paper, a tri-ray node snapping algorithm is proposed to generate a volumetric heterogeneous deformable model from a set of object interface surfaces between different materials. A constrained local static integration method is presented for simulating deformation and accurate force feedback based on the material properties of a heterogeneous structure. Biological soft tissue modeling is used as an example to demonstrate the proposed techniques. By integrating the heterogeneous deformable model into a virtual environment, users can both observe different materials inside a deformable object as well as interact with it by touching the deformable object using a haptic device. The presented techniques can be used for surgical simulation, bio-product design, bio-manufacturing, and medical applications.
Modelling of deformation and recrystallisation microstructures in rocks and ice
NASA Astrophysics Data System (ADS)
Bons, Paul D.; Evans, Lynn A.; Gomez-Rivas, Enrique; Griera, Albert; Jessell, Mark W.; Lebensohn, Ricardo; Llorens, Maria-Gema; Peternell, Mark; Piazolo, Sandra; Weikusat, Ilka; Wilson, Chris J. L.
2015-04-01
Microstructures both record the deformation history of a rock and strongly control its mechanical properties. As microstructures in natural rocks only show the final "post-mortem" state, geologists have attempted to simulate the development of microstructures with experiments and later numerical models. Especially in-situ experiments have given enormous insight, as time-lapse movies could reveal the full history of a microstructure. Numerical modelling is an alternative approach to simulate and follow the change in microstructure with time, unconstrained by experimental limitations. Numerical models have been applied to a range of microstructural processes, such as grain growth, dynamic recrystallisation, porphyroblast rotation, vein growth, formation of mylonitic fabrics, etc. The numerical platform "Elle" (www.elle.ws) in particular has brought progress in the simulation of microstructural development as it is specifically designed to include the competition between simultaneously operating processes. Three developments significantly improve our capability to simulate microstructural evolution: (1) model input from the mapping of crystallographic orientation with EBSD or the automatic fabric analyser, (2) measurement of grain size and crystallographic preferred orientation evolution using neutron diffraction experiments and (3) the implementation of the full-field Fast Fourier Transform (FFT) solver for modelling anisotropic crystal-plastic deformation. The latter enables the detailed modelling of stress and strain as a function of local crystallographic orientation, which has a strong effect on strain localisation such as, for example, the formation of shear bands. These models can now be compared with the temporal evolution of crystallographic orientation distributions in in-situ experiments. In the last decade, the possibility to combine experiments with numerical simulations has allowed not only verification and refinement of the numerical simulation
Geometrical measures of non-Gaussianity generated from single field inflationary models
NASA Astrophysics Data System (ADS)
Junaid, M.; Pogosyan, D.
2015-08-01
We calculate the third-order moments of scalar curvature perturbations in configuration space for different inflationary models. We develop a robust numerical technique to compute the bispectrum for different models that have some features in the inflationary potential. From the bispectrum we evaluate moments analytically in the slow-roll regime while we devise a numerical mechanism to calculate these moments for non-slow-roll single-field inflationary models with a standard kinetic term that are minimally coupled to gravity. With the help of these third-order moments one can directly predict many non-Gaussian and geometrical measures of cosmic microwave background distributions in the configuration space. Thus, we devise a framework to calculate different third-order moments and geometrical measures, e.g. Minkowski functionals or the skeleton statistic, generated by different single-field models of inflation.
NASA Astrophysics Data System (ADS)
Li, Zhiyong; Zeng, Zuoxun; Mohammed, Adil S.
2017-05-01
This paper presents a combined field measurement and finite element modeling analysis of the mullions occurring on the contact of two granitic rocks with different grain size in the Taili High-Strain Deformation Zone (THDZ), West Liaoning of North China. All of the field data are located in the plot zone of the modeling results. Numerical modeling results indicate that: (1) The inter-angle between the tangent lines cross the cusp point and the ratio R of amplitude and width of mullions are the most effective parameters to describe the geometric shape and evolution of mullions, as well as useful indicators of the rheology of rocks. (2) The competence contrast controls the growth rate of mullions under shortening. It determines the possible ratio R of final mullions. Moreover, decreasing of the cusp angle in high competence contrast materials is faster than that in low competence contrast model. (3) The initial disturbance is an essential factor for the generation of mullions. Those contacts with higher initial disturbance will develop into mullions more easily and have a high growth rate during the same shortening deformation regime. (4) The rheology and deformation behavior of the granitic rocks in the study area are primarily controlled by the grain sizes of quartz and feldspar. The effective viscosity ratio of biotite adamellite and granitic gneisses is about 0.01-0.5. The deformation mechanisms of these granitic rocks should be dominated by a grain-size-sensitive diffusion creep.
Shen, Z; Koyfman, S; Xia, P; Bzdusek, K
2015-06-15
Purpose: To evaluate geometric and dosimetric uncertainties of CT-CBCT deformable image registration (DIR) algorithms using digital phantoms generated from real patients. Methods: We selected ten H&N cancer patients with adaptive IMRT. For each patient, a planning CT (CT1), a replanning CT (CT2), and a pretreatment CBCT (CBCT1) were used as the basis for digital phantom creation. Manually adjusted meshes were created for selected ROIs (e.g. PTVs, brainstem, spinal cord, mandible, and parotids) on CT1 and CT2. The mesh vertices were input into a thin-plate spline algorithm to generate a reference displacement vector field (DVF). The reference DVF was applied to CBCT1 to create a simulated mid-treatment CBCT (CBCT2). The CT-CBCT digital phantom consisted of CT1 and CBCT2, which were linked by the reference DVF. Three DIR algorithms (Demons, B-Spline, and intensity-based) were applied to these ten digital phantoms. The images, ROIs, and volumetric doses were mapped from CT1 to CBCT2 using the DVFs computed by these three DIRs and compared to those mapped using the reference DVF. Results: The average Dice coefficients for selected ROIs were from 0.83 to 0.94 for Demons, from 0.82 to 0.95 for B-Spline, and from 0.67 to 0.89 for intensity-based DIR. The average Hausdorff distances for selected ROIs were from 2.4 to 6.2 mm for Demons, from 1.8 to 5.9 mm for B-Spline, and from 2.8 to 11.2 mm for intensity-based DIR. The average absolute dose errors for selected ROIs were from 0.7 to 2.1 Gy for Demons, from 0.7 to 2.9 Gy for B- Spline, and from 1.3 to 4.5 Gy for intensity-based DIR. Conclusion: Using clinically realistic CT-CBCT digital phantoms, Demons and B-Spline were shown to have similar geometric and dosimetric uncertainties while intensity-based DIR had the worst uncertainties. CT-CBCT DIR has the potential to provide accurate CBCT-based dose verification for H&N adaptive radiotherapy. Z Shen: None; K Bzdusek: an employee of Philips Healthcare; S Koyfman: None; P Xia
Visualization of cardiac dynamics using physics-based deformable model
NASA Astrophysics Data System (ADS)
Lin, Wei-te; Robb, Richard A.
2000-04-01
Modeling of moving anatomic structures is complicated by the complexity of motion intrinsic and extrinsic to the structures. However when motion is cyclical, such as in heart, effective dynamic modeling can be approached using modern fast imaging techniques, which provide 3D structural data. Data may be acquired as a sequence of 3D volume images throughout the cardiac cycle. To model the intricate non- linear motion of the heart, we created a physics-based surface model which can realistically deform between successive time points in the cardiac cycle, yielding a dynamic 4D model of cardiac motion. Sequences of fifteen 3D volume images of intact canine beating hearts were acquired during compete cardiac cycles using the Dynamic Spatial Reconstructor and the Electron Beam CT. The chambers of the heart were segmented at successive time points, typically at 1/15-second intervals. The left ventricle of the first item point was reconstructed as an initial triangular mesh. A mass-spring physics-based deformable model, which can expand and shrink with local contraction and stretching forces distributed in an anatomically accurate simulation of cardiac motion, was applied to the initial mesh and allowed the initial mesh to deform to fit the left ventricle in successive time increments of the sequence. The resultant 4D model can be interactively transformed and displayed with associated regional electrical activity mapped onto the anatomic surfaces, producing a 5D mode, which faithfully exhibits regional cardiac contraction and relaxation patterns over the entire heart. For acquisition systems that may provide only limited 4D data, the model can provide interpolated anatomic shape between time points. This physics-based deformable model accurately represents dynamic cardiac structural changes throughout the cardiac cycle. Such models provides the framework for minimizing the number of time points required to usefully depict regional motion of myocardium and allowing
Surrogate Modeling of Deformable Joint Contact using Artificial Neural Networks
Eskinazi, Ilan; Fregly, Benjamin J.
2016-01-01
Deformable joint contact models can be used to estimate loading conditions for cartilage-cartilage, implant-implant, human-orthotic, and foot-ground interactions. However, contact evaluations are often so expensive computationally that they can be prohibitive for simulations or optimizations requiring thousands or even millions of contact evaluations. To overcome this limitation, we developed a novel surrogate contact modeling method based on artificial neural networks (ANNs). The method uses special sampling techniques to gather input-output data points from an original (slow) contact model in multiple domains of input space, where each domain represents a different physical situation likely to be encountered. For each contact force and torque output by the original contact model, a multi-layer feed-forward ANN is defined, trained, and incorporated into a surrogate contact model. As an evaluation problem, we created an ANN-based surrogate contact model of an artificial tibiofemoral joint using over 75,000 evaluations of a fine-grid elastic foundation (EF) contact model. The surrogate contact model computed contact forces and torques about 1000 times faster than a less accurate coarse grid EF contact model. Furthermore, the surrogate contact model was seven times more accurate than the coarse grid EF contact model within the input domain of a walking motion. For larger input domains, the surrogate contact model showed the expected trend of increasing error with increasing domain size. In addition, the surrogate contact model was able to identify out-of-contact situations with high accuracy. Computational contact models created using our proposed ANN approach may remove an important computational bottleneck from musculoskeletal simulations or optimizations incorporating deformable joint contact models. PMID:26220591
Surrogate modeling of deformable joint contact using artificial neural networks.
Eskinazi, Ilan; Fregly, Benjamin J
2015-09-01
Deformable joint contact models can be used to estimate loading conditions for cartilage-cartilage, implant-implant, human-orthotic, and foot-ground interactions. However, contact evaluations are often so expensive computationally that they can be prohibitive for simulations or optimizations requiring thousands or even millions of contact evaluations. To overcome this limitation, we developed a novel surrogate contact modeling method based on artificial neural networks (ANNs). The method uses special sampling techniques to gather input-output data points from an original (slow) contact model in multiple domains of input space, where each domain represents a different physical situation likely to be encountered. For each contact force and torque output by the original contact model, a multi-layer feed-forward ANN is defined, trained, and incorporated into a surrogate contact model. As an evaluation problem, we created an ANN-based surrogate contact model of an artificial tibiofemoral joint using over 75,000 evaluations of a fine-grid elastic foundation (EF) contact model. The surrogate contact model computed contact forces and torques about 1000 times faster than a less accurate coarse grid EF contact model. Furthermore, the surrogate contact model was seven times more accurate than the coarse grid EF contact model within the input domain of a walking motion. For larger input domains, the surrogate contact model showed the expected trend of increasing error with increasing domain size. In addition, the surrogate contact model was able to identify out-of-contact situations with high accuracy. Computational contact models created using our proposed ANN approach may remove an important computational bottleneck from musculoskeletal simulations or optimizations incorporating deformable joint contact models.
Frame junction vibration transmission with a modified frame deformation model.
Moore, J A
1990-12-01
A previous paper dealt with vibration transmission through junctions of connected frame members where the allowed frame deformations included bending, torsion, and longitudinal motions [J.A. Moore, J. Acoust. Soc. Am. 88, 2766-2776 (1990)]. In helicopter and aircraft structures the skin panels can constitute a high impedance connection along the length of the frames that effectively prohibits in-plane motion at the elevation of the skin panels. This has the effect of coupling in-plane bending and torsional motions within the frame. This paper discusses the transmission behavior through frame junctions that accounts for the in-plane constraint in idealized form by assuming that the attached skin panels completely prohibit inplane motion in the frames. Also, transverse shear deformation is accounted for in describing the relatively deep web frame constructions common in aircraft structures. Longitudinal motion in the frames is not included in the model. Transmission coefficient predictions again show the importance of out-of-plane bending deformation to the transmission of vibratory energy in an aircraft structure. Comparisons are shown with measured vibration transmission data along the framing in the overhead of a helicopter airframe, with good agreement. The frame junction description has been implemented within a general purpose statistical energy analysis (SEA) computer code in modeling the entire airframe structure including skin panels.
Modeling the behaviour of shape memory materials under large deformations
NASA Astrophysics Data System (ADS)
Rogovoy, A. A.; Stolbova, O. S.
2017-06-01
In this study, the models describing the behavior of shape memory alloys, ferromagnetic materials and polymers have been constructed, using a formalized approach to develop the constitutive equations for complex media under large deformations. The kinematic and constitutive equations, satisfying the principles of thermodynamics and objectivity, have been derived. The application of the Galerkin procedure to the systems of equations of solid mechanics allowed us to obtain the Lagrange variational equation and variational formulation of the magnetostatics problems. These relations have been tested in the context of the problems of finite deformation in shape memory alloys and ferromagnetic materials during forward and reverse martensitic transformations and in shape memory polymers during forward and reverse relaxation transitions from a highly elastic to a glassy state.
Oscillatory athermal quasistatic deformation of a model glass
NASA Astrophysics Data System (ADS)
Fiocco, Davide; Foffi, Giuseppe; Sastry, Srikanth
2013-08-01
We report computer simulations of oscillatory athermal quasistatic shear deformation of dense amorphous samples of a three-dimensional model glass former. A dynamical transition is observed as the amplitude of the deformation is varied: For large values of the amplitude the system exhibits diffusive behavior and loss of memory of the initial conditions, whereas localization is observed for small amplitudes. Our results suggest that the same kind of transition found in driven colloidal systems is present in the case of amorphous solids (e.g., metallic glasses). The onset of the transition is shown to be related to the onset of energy dissipation. Shear banding is observed for large system sizes, without, however, affecting qualitative aspects of the transition.
Foundation model testing of the second deformation modulus Eν2
NASA Astrophysics Data System (ADS)
Sun, Xiao
2017-09-01
The bearing capacity of the soil foundation can be reflected by its second deformation modulus Eν2 , and the construction quality of the soil foundation can be evaluated by this deformation modulus. At present, the detection method of Eν2 has been applied in construction quality control of soil foundation in applications such as the foundations of airports, railways, and highways. In order to show the feasibility and reliability of the laboratory test method of calculating Eν2 , the field test method is simulated to test the value of Eν2 of the fill foundation model and compare it with the laboratory test method. The results show that the results of field testing and laboratory testing were in good agreement. This provides a new method for testing the value of Eν2 .
Improved techniques for thermomechanical testing in support of deformation modeling
NASA Technical Reports Server (NTRS)
Castelli, Michael G.; Ellis, John R.
1992-01-01
The feasibility of generating precise thermomechanical deformation data to support constitutive model development was investigated. Here, the requirement is for experimental data that is free from anomalies caused by less than ideal equipment and procedures. A series of exploratory tests conducted on Hastelloy X showed that generally accepted techniques for strain controlled tests were lacking in at least three areas. Specifically, problems were encountered with specimen stability, thermal strain compensation, and temperature/mechanical strain phasing. The source of these difficulties was identified and improved thermomechanical testing techniques to correct them were developed. These goals were achieved by developing improved procedures for measuring and controlling thermal gradients and by designing a specimen specifically for thermomechanical testing. In addition, innovative control strategies were developed to correctly proportion and phase the thermal and mechanical components of strain. Subsequently, the improved techniques were used to generate deformation data for Hastelloy X over the temperature range, 200 to 1000 C.
Finite element modeling of the deformation of magnetoelastic film
Barham, Matthew I.; White, Daniel A.; Steigmann, David J.
2010-09-01
Recently a new class of biocompatible elastic polymers loaded with small ferrous particles, a magnetoelastic polymer, has been developed. This engineered material is formed into a thin film using spin casting. An applied magnetic field will deform the film. The magnetic deformation of this film has many possible applications, particularly in microfluidic pumps and pressure regulators. In this paper a finite element method suitable for the transient simulation of arbitrarily shaped three-dimensional magnetoelastic polymers subjected to time-varying magnetic fields is developed. The approach is similar to that employed in finite elment magnetohydrodynamic simulations, the key difference is a more complex hyperelastic material model. In order to confirm the validity of the approach, finite element solutions for an axially symmetric thin film are compared to an analytical solution based on the membrane (infinitely thin) approximation. For this particular problem the two approaches give qualitatively similar results and converge as the film thickness approaches zero.
Elastic properties of compressed cryocrystals in a deformed atom model
NASA Astrophysics Data System (ADS)
Gorbenko, Ie. Ie.; Zhikharev, I. V.; Troitskaya, E. P.; Chabanenko, Val. V.; Pilipenko, E. A.
2013-06-01
A model with deformed atom shells was built to investigate the elastic properties of rare-gas Ne and Kr crystals under high pressure. It is shown that the observed deviation from the Cauchy relation δ cannot be adequately reproduced when taking into account only the many-body interaction. The individual pressure dependence of δ is the result of competition of the many-body interaction and the quadrupole interaction associated with the quadrupole-type deformation of electron shells of the atoms during the displacement of the nuclei. Each kind of interaction makes a strongly pressure dependent contribution to δ. In the case of Ne and Kr, contributions of these interactions are compensated to a good precision, providing δ being almost constant against pressure.
Accuracy of femur reconstruction from sparse geometric data using a statistical shape model.
Zhang, Ju; Besier, Thor F
2017-04-01
Sparse geometric information from limited field-of-view medical images is often used to reconstruct the femur in biomechanical models of the hip and knee. However, the full femur geometry is needed to establish boundary conditions such as muscle attachment sites and joint axes which define the orientation of joint loads. Statistical shape models have been used to estimate the geometry of the full femur from varying amounts of sparse geometric information. However, the effect that different amounts of sparse data have on reconstruction accuracy has not been systematically assessed. In this study, we compared shape model and linear scaling reconstruction of the full femur surface from varying proportions of proximal and distal partial femur geometry in combination with morphometric and landmark data. We quantified reconstruction error in terms of surface-to-surface error as well as deviations in the reconstructed femur's anatomical coordinate system which is important for biomechanical models. Using a partial proximal femur surface, mean shape model-based reconstruction surface error was 1.8 mm with 0.15° or less anatomic axis error, compared to 19.1 mm and 2.7-5.6° for linear scaling. Similar results were found when using a partial distal surface. However, varying amounts of proximal or distal partial surface data had a negligible effect on reconstruction accuracy. Our results show that given an appropriate set of sparse geometric data, a shape model can reconstruct full femur geometry with far greater accuracy than simple scaling.
Quasiequilibrium models for triaxially deformed rotating compact stars
Huang Xing; Markakis, Charalampos; Sugiyama, Noriyuki; Uryu, Koji
2008-12-15
Quasiequilibrium models of rapidly rotating triaxially deformed stars are computed in general relativistic gravity, assuming a conformally flat spatial geometry (Isenberg-Wilson-Mathews formulation) and a polytropic equation of state. Highly deformed solutions are calculated on the initial slice covered by spherical coordinate grids, centered at the source, in all angular directions up to a large truncation radius. Constant rest mass sequences are calculated from nearly axisymmetric to maximally deformed triaxial configurations. Selected parameters are to model (proto-) neutron stars; the compactness is M/R=0.001, 0.1, 0.14, and 0.2 for polytropic index n=0.3 and M/R=0.001, 0.1, 0.12, and 0.14 for n=0.5, where M/R refers to that of a nonrotating spherical star having the same rest mass. We confirmed that the triaxial solutions exist for these parameters as in the case of Newtonian polytropes. However, it is also found that the triaxial sequences become shorter for higher compactness, and those disappear at a certain large compactness for the n=0.5 case. In the scenario of the contraction of proto-neutron stars being subject to strong viscosity and rapid cooling, it is plausible that, once the viscosity driven secular instability sets in during the contraction, the proto-neutron stars are always maximally deformed triaxial configurations, as long as the compactness and the equation of state parameters allow such triaxial sequences. Detection of gravitational waves from such sources may be used as another probe for the nuclear equation of state.
A nonaffine network model for elastomers undergoing finite deformations
NASA Astrophysics Data System (ADS)
Davidson, Jacob D.; Goulbourne, N. C.
2013-08-01
In this work, we construct a new physics-based model of rubber elasticity to capture the strain softening, strain hardening, and deformation-state dependent response of rubber materials undergoing finite deformations. This model is unique in its ability to capture large-stretch mechanical behavior with parameters that are connected to the polymer chemistry and can also be easily identified with the important characteristics of the macroscopic stress-stretch response. The microscopic picture consists of two components: a crosslinked network of Langevin chains and an entangled network with chains confined to a nonaffine tube. These represent, respectively, changes in entropy due to thermally averaged chain conformations and changes in entropy due to the magnitude of these conformational fluctuations. A simple analytical form for the strain energy density is obtained using Rubinstein and Panyukov's single-chain description of network behavior. The model only depends on three parameters that together define the initial modulus, extent of strain softening, and the onset of strain hardening. Fits to large stretch data for natural rubber, silicone rubber, VHB 4905 (polyacrylate rubber), and b186 rubber (a carbon black-filled rubber) are presented, and a comparison is made with other similar constitutive models of large-stretch rubber elasticity. We demonstrate that the proposed model provides a complete description of elastomers undergoing large deformations for different applied loading configurations. Moreover, since the strain energy is obtained using a clear set of physical assumptions, this model may be tested and used to interpret the results of computer simulation and experiments on polymers of known microscopic structure.
Region-based geometric modelling of human airways and arterial vessels.
Ding, Songlin; Ye, Yong; Tu, Jiyuan; Subic, Aleksandar
2010-03-01
Anatomically precise geometric models of human airways and arterial vessels play a critical role in the analysis of air and blood flows in human bodies. The established geometric modelling methods become invalid when the model consists of bronchioles or small vessels. This paper presents a new method for reconstructing the entire airway tree and carotid vessels from point clouds obtained from CT or MR images. A novel layer-by-layer searching algorithm has been developed to recognize branches of the airway tree and arterial vessels from the point clouds. Instead of applying uniform accuracy to all branches regardless of the number of available points, the surface patches on each branch are constructed adaptively based on the number of available elemental points, which leads to the elimination of distortions occurring at small bronchi and vessels.
Geant4.10 simulation of geometric model for metaphase chromosome
NASA Astrophysics Data System (ADS)
Rafat-Motavalli, L.; Miri-Hakimabad, H.; Bakhtiyari, E.
2016-04-01
In this paper, a geometric model of metaphase chromosome is explained. The model is constructed according to the packing ratio and dimension of the structure from nucleosome up to chromosome. A B-DNA base pair is used to construct 200 base pairs of nucleosomes. Each chromatin fiber loop, which is the unit of repeat, has 49,200 bp. This geometry is entered in Geant4.10 Monte Carlo simulation toolkit and can be extended to the whole metaphase chromosomes and any application in which a DNA geometrical model is needed. The chromosome base pairs, chromosome length, and relative length of chromosomes are calculated. The calculated relative length is compared to the relative length of human chromosomes.
NASA Astrophysics Data System (ADS)
Lüdde, Hans Jürgen; Achenbach, Alexander; Kalkbrenner, Thilo; Jankowiak, Hans-Christian; Kirchner, Tom
2016-04-01
A new model to account for geometric screening corrections in an independent-atom-model description of ion-molecule collisions is introduced. The ion-molecule cross sections for net capture and net ionization are represented as weighted sums of atomic cross sections with weight factors that are determined from a geometric model of overlapping cross section areas. Results are presented for proton collisions with targets ranging from diatomic to complex polyatomic molecules. Significant improvement compared to simple additivity rule results and in general good agreement with experimental data are found. The flexibility of the approach opens up the possibility to study more detailed observables such as orientation-dependent and charge-state-correlated cross sections for a large class of complex targets ranging from biomolecules to atomic clusters.
Software for Mathematical Modeling of Plastic Deformation in FCC Metals
NASA Astrophysics Data System (ADS)
Petelin, A. E.; Eliseev, A. S.
2017-08-01
The question on the necessity of software implementation in the study of plastic deformation in FCC metals with the use of mathematical modeling methods is investigated. This article describes the implementation features and the possibility of using the software Dislocation Dynamics of Crystallographic Slip (DDCS). The software has an advanced user interface and is designed for users without an extensive experience in IT-technologies. Parameter values of the mathematical model, obtained from field experiments and accumulated in a special database, are used in DDCS to carry out computational experiments. Moreover, the software is capable of accumulating bibliographic information used in research.
NASA Astrophysics Data System (ADS)
Richeton, T.; Le, LT; Chauve, T.; Bernacki, M.; Berbenni, S.; Montagnat, M.
2017-02-01
A model based on the elastic theory of continuously distributed dislocations, accounting for the transport of geometrically necessary dislocations (GND) on slip systems is developed. It allows keeping the crystallographic nature of glide by allocating velocities specific to slip systems to GND. At grain boundaries, the dislocation transport equation is resolved between a specific system in a grain and a specific system in the adjacent grain. It is used to simulate a compression creep test followed by unloading of a multiple slip deforming multi-crystal of ice during which kink band formation, grain boundary migration and localized grain nucleation are observed. The model predictions are compared to 2D strain fields obtained by digital image correlation and show a good agreement. Besides, the kink band position corresponds very well with an area of strong lattice misorientation predicted by the model and is also bounded by opposite densities of edge dislocations, in agreement with kink banding theory and characterization. Furthermore, the grain boundary migration is observed to happen from predicted low dislocation density area towards high dislocation ones—also in agreement with the theory. Lastly, the triple junctions where nucleation is observed are also characterized by high GND density and especially strong gradient of elastic energy density. These different features show the relevance of using a continuum theory of polarized dislocations per slip system to study the onset of relaxation mechanisms like kink banding, grain boundary migration and grain nucleation and possibly to propose nucleation and migration criteria.
Evaluation of Geometrically Nonlinear Reduced Order Models with Nonlinear Normal Modes
Kuether, Robert J.; Deaner, Brandon J.; Hollkamp, Joseph J.; Allen, Matthew S.
2015-09-15
Several reduced-order modeling strategies have been developed to create low-order models of geometrically nonlinear structures from detailed finite element models, allowing one to compute the dynamic response of the structure at a dramatically reduced cost. But, the parameters of these reduced-order models are estimated by applying a series of static loads to the finite element model, and the quality of the reduced-order model can be highly sensitive to the amplitudes of the static load cases used and to the type/number of modes used in the basis. Our paper proposes to combine reduced-order modeling and numerical continuation to estimate the nonlinear normal modes of geometrically nonlinear finite element models. Not only does this make it possible to compute the nonlinear normal modes far more quickly than existing approaches, but the nonlinear normal modes are also shown to be an excellent metric by which the quality of the reduced-order model can be assessed. Hence, the second contribution of this work is to demonstrate how nonlinear normal modes can be used as a metric by which nonlinear reduced-order models can be compared. Moreover, various reduced-order models with hardening nonlinearities are compared for two different structures to demonstrate these concepts: a clamped–clamped beam model, and a more complicated finite element model of an exhaust panel cover.
Evaluation of Geometrically Nonlinear Reduced Order Models with Nonlinear Normal Modes
Kuether, Robert J.; Deaner, Brandon J.; Hollkamp, Joseph J.; ...
2015-09-15
Several reduced-order modeling strategies have been developed to create low-order models of geometrically nonlinear structures from detailed finite element models, allowing one to compute the dynamic response of the structure at a dramatically reduced cost. But, the parameters of these reduced-order models are estimated by applying a series of static loads to the finite element model, and the quality of the reduced-order model can be highly sensitive to the amplitudes of the static load cases used and to the type/number of modes used in the basis. Our paper proposes to combine reduced-order modeling and numerical continuation to estimate the nonlinearmore » normal modes of geometrically nonlinear finite element models. Not only does this make it possible to compute the nonlinear normal modes far more quickly than existing approaches, but the nonlinear normal modes are also shown to be an excellent metric by which the quality of the reduced-order model can be assessed. Hence, the second contribution of this work is to demonstrate how nonlinear normal modes can be used as a metric by which nonlinear reduced-order models can be compared. Moreover, various reduced-order models with hardening nonlinearities are compared for two different structures to demonstrate these concepts: a clamped–clamped beam model, and a more complicated finite element model of an exhaust panel cover.« less
NASA Astrophysics Data System (ADS)
Gance, Julien; Bernardie, Séverine; Grandjean, Gilles; Malet, Jean-Philippe
2014-05-01
Landslide hazard can be assessed through numerical hydro-mechanical models. These methods require different input data such as a geometric model, rheological constitutive laws and associated hydro-mechanical parameters, and boundary conditions. The objective of this study is to fill the gap existing between geophysical and engineering communities. This gap prevents the engineering community to use the full information available in geophysical imagery. A landslide geometrical model contains information on the geometry and extent of the different geotechnical units of the landslide, and describes the layering and the discontinuities. It is generally drawn from punctual geotechnical tests, using interpolation, or better, from the combined use of a geotechnical test and the iso-value of geophysical tomographies. In this context, we propose to use a multi-source geophysical data fusion strategy as an aid for the construction of landslide geometric models. Based on a fuzzy logic data fusion method, we propose to use different geophysical tomographies and their associated uncertainty and sensitivity tomograms to design a "probable" geometric model. This strategy is tested on a profile of the Super-Sauze landslide using P-wave velocity, P-wave attenuation and electrical resistivity tomography. We construct a probable model and a true model for numerical modeling. Using basic elastic constitutive laws, we show that the model geometry is sufficiently detailed to simulate the complex surface displacements pattern.
Active deformable sheets: prototype implementation, modeling, and control
NASA Astrophysics Data System (ADS)
Lind, Robert J.; Johnson, Norbert; Doumanidis, Charalabos C.
2000-06-01
Active deformable sheets are integrated smart planar sheet structures performing off-plane deformations under computer actuation and control, to take up a desired dynamic morphology specified in CAD software or obtained by 3-D scanning of a solid surface. The sheet prototypes are implemented in the laboratory by elastic neoprene foil layers with embedded asymmetric grids of SMA wires (Nitinol), which upon electrical contraction bend the sheet to the necessary local curvature distribution. An analytical model of such prototypes, consisting of an electrical, a thermal, a material and a mechanical module, as well as a more complex finite element thermomechanical simulation of the sheet structure have been developed and validated experimentally. Besides open-loop control of the sheet curvatures by modulation of the SMA wire actuation current, a closed-loop control system has been implemented, using feedback of the wire electrical resistance measurements in real time, correlating to the material transformation state. The active deformable sheets are intended for applications such as reconfigurable airfoils and aerospace structures, variable focal length optics and electromagnetic reflectors, flexible and rapid tooling and microrobotics.
Soliton-like excitations in a deformable spin model
NASA Astrophysics Data System (ADS)
Nguenang, Jean-Pierre; Kenfack, Aurelien J.; Kofané, Timoleon C.
2004-01-01
Nonlinear excitations in a one-dimensional deformable, discrete, classical, ferromagnetic chain are numerically investigated. In the continuum limit the equations of motion are reduced to a Klein-Gordon equation, with a Remoissenet-Peyrard substrate potential. From a numerical computation of the discrete system with a suitable choice of the deformability parameters, the soliton solutions are shown to exist and move both with a monotonic oscillating (i.e. nanopteron) and a monotonic nonoscillating tail, and also with a non-oscillating tail but with a splitting propagating shape. The stability of all these various soliton shapes is confirmed numerically in a range of the reduced magnetic fields greater than for a rigid magnetic chain i.e. 0 \\le b \\le 0.33 . From a kink-antikink and a kink-kink colliding simulation, we found various effects, including a bound state of a kink and an antikink, as well as a moving kink profile with higher topological charge that appears to be the bound state of two kinks. For some values of the deformability parameter, with a suitable choice of the initial velocity, we observed that the presence of an internal mode leads to the combination of an attractive and a repulsive phenomenon, that arises when the kink-kink collision is engaged. The fact that this collision happens only in the centre of the magnetic chain with the presence of a minimal distance between the two kinks as long as the collision is produced is also a feature of the deformability effect in the dynamics of a magnetic chain. From our results, it appears that the value of the shape parameter of the substrate potential or the modified Zeeman energy is a factor of utmost importance when modelling magnetic chains.
NASA Astrophysics Data System (ADS)
Kwon, H.
2011-12-01
The impact of climate variation on monsoon seasonal rainfall has been generally well documented in the climate literature. However, rather limited efforts have been done to understand moisture transport and their impact on extreme rainfall in the hydrology field. This study developed a new model for extracting moisture tracks associated with extreme events as a way to characterize large scale climate system. Main interests are to derive location, size and direction of the rainfall field and this study developed an algorithm to extract the above characteristics from global climate data set. In order to facilitate characterization of synoptic patterns, geometric moment based ellipsoid models are introduced. Local weather station data in Korea and NCEP reanalysis data are mainly utilized to identify synoptic patterns. The proposed geometric moments based ellipsoid model works equally well with regularly and irregularly distributed synthetic grid data. Finally, the proposed model was applied to space-time real moisture transport. We extracted daily wind patterns and specific humidity on top 20 extreme rainfall events and apply a 90% threshold to isolate high magnitude of moisture transport associated with extreme rainfall in South Korea. It was found that location, size and direction of the rainfall field was successfully extracted. Our analyses of daily synoptic moisture transport patterns defined by geometric moments suggest can be possibly clustered given their intensity, direction and position properties. Acknowledgement : This work was supported by National Research Foundation of Korea Grant funded by the Korean Government (NRF-2010-220-D00083)
Multiscale Combination of Physically-Based Registration and Deformation Modeling
Tsap, L.; Goldgof, D.B.; Sarkar, S.
1999-11-08
In this paper the authors present a novel multiscale approach to recovery of nonrigid motion from sequences of registered intensity and range images. The main idea of the approach is that a finite element (FEM) model can naturally handle both registration and deformation modeling using a single model-driving strategy. The method includes a multiscale iterative algorithm based on analysis of the undirected Hausdorff distance to recover correspondences. The method is evaluated with respect to speed, accuracy, and noise sensitivity. Advantages of the proposed approach are demonstrated using man-made elastic materials and human skin motion. Experiments with regular grid features are used for performance comparison with a conventional approach (separate snakes and FEM models). It is shown that the new method does not require a grid and can adapt the model to available object features.
A human supervisory approach to rapid world modeling through the use of geometric primitives
Luck, J.; Roberts, R.
1997-08-11
A three-dimensional world model is crucial for many robot-oriented tasks. The most efficient mapping configuration use geometric primitives to model environments, and are easy to store and process. In the past, modeling techniques have been either fully manual or autonomous. Manual methods are extremely time consuming but also highly accurate and flexible. On the other hand autonomous techniques are fast but inflexible and often inaccurate. The method presented in this paper combines the two thereby yielding a highly efficient, flexible, and accurate tool. Our methods enable a human supervisor to quickly construct a fully defined world model from unfiltered and unsegmented real-world range data.
Partial SUSY breaking for asymmetric Gepner models and non-geometric flux vacua
NASA Astrophysics Data System (ADS)
Blumenhagen, Ralph; Fuchs, Michael; Plauschinn, Erik
2017-01-01
Using the method of simple current extensions, asymmetric Gepner models of Type IIB with N = 1 space-time supersymmetry are constructed. The combinatorics of the massless vector fields suggests that these classical Minkowski string vacua provide fully backreacted solutions corresponding to N = 1 minima of N = 2 gauged supergravity. The latter contain abelian gaugings along the axionic isometries in the hypermultiplet moduli space, and can be considered as Type IIB flux compactifications on Calabi-Yau manifolds equipped with (non-)geometric fluxes. For a particular class of asymmetric Gepner models, we are able to explicitly specify the underlying CICYs and to check necessary conditions for a GSUGRA interpretation. If this conjecture is correct, there exists a large class of exactly solvable non-geometric flux compactifications on CY threefolds.
Hubble space telescope observations and geometric models of compact multipolar planetary nebulae
Hsia, Chih-Hao; Chau, Wayne; Zhang, Yong; Kwok, Sun E-mail: wwlljj1314@gmail.com E-mail: sunkwok@hku.hk
2014-05-20
We report high angular resolution Hubble Space Telescope observations of 10 compact planetary nebulae (PNs). Many interesting internal structures, including multipolar lobes, arcs, two-dimensional rings, tori, and halos, are revealed for the first time. These results suggest that multipolar structures are common among PNs, and these structures develop early in their evolution. From three-dimensional geometric models, we have determined the intrinsic dimensions of the lobes. Assuming the lobes are the result of interactions between later-developed fast winds and previously ejected asymptotic giant branch winds, the geometric structures of these PNs suggest that there are multiple phases of fast winds separated by temporal variations and/or directional changes. A scenario of evolution from lobe-dominated to cavity-dominated stages is presented. The results reported here will provide serious constraints on any dynamical models of PNs.
A coupled model for intragranular deformation and chemical diffusion
NASA Astrophysics Data System (ADS)
Zhong, Xin; Vrijmoed, Johannes; Moulas, Evangelos; Tajčmanová, Lucie
2017-09-01
A coupled model for chemical diffusion and mechanical deformation is developed in analogy to the studies of poroelasticity and thermoelasticity. Nondimensionalization of the governing equations yields a controlling dimensionless parameter, the Deborah number, given by the ratio of the characteristic time for pressure relaxation and concentration homogenization. Using the Deborah number two types of plausible chemical zonation are distinguished, i.e. diffusion controlled, and mechanically controlled. The transition between these two types of chemical zonation is determined at the conditions where the Deborah number equals one. We apply our model to a chemically zoned plagioclase rim in a spherical coordinate frame assuming homogeneous initial pressure. Using thermodynamic data, an experimentally derived diffusion coefficient and a viscous flow law for plagioclase, our numerical simulations show that up to ∼0.6 GPa grain-scale pressure variation is generated during the diffusion-deformation process. Due to the mechanical-chemical coupling, the pressure variations maintain the chemical zonation longer than predicted by the classical diffusion model. The fully coupled mechanical-chemical model provides an alternative explanation for the preservation of chemically zoned minerals, and may contribute to a better understanding of metamorphic processes in the deep Earth interior.
GEOMETRIC CROSS SECTIONS OF DUST AGGREGATES AND A COMPRESSION MODEL FOR AGGREGATE COLLISIONS
Suyama, Toru; Wada, Koji; Tanaka, Hidekazu; Okuzumi, Satoshi
2012-07-10
Geometric cross sections of dust aggregates determine their coupling with disk gas, which governs their motions in protoplanetary disks. Collisional outcomes also depend on geometric cross sections of initial aggregates. In a previous paper, we performed three-dimensional N-body simulations of sequential collisions of aggregates composed of a number of sub-micron-sized icy particles and examined radii of gyration (and bulk densities) of the obtained aggregates. We showed that collisional compression of aggregates is not efficient and that aggregates remain fluffy. In the present study, we examine geometric cross sections of the aggregates. Their cross sections decrease due to compression as well as to their gyration radii. It is found that a relation between the cross section and the gyration radius proposed by Okuzumi et al. is valid for the compressed aggregates. We also refine the compression model proposed in our previous paper. The refined model enables us to calculate the evolution of both gyration radii and cross sections of growing aggregates and reproduces well our numerical results of sequential aggregate collisions. The refined model can describe non-equal-mass collisions as well as equal-mass cases. Although we do not take into account oblique collisions in the present study, oblique collisions would further hinder compression of aggregates.
Hirzel, Alexandre H; Arlettaz, Raphaël
2003-11-01
This paper presents a new habitat suitability modeling method whose main properties are as follows: (1) It is based on the density of observation points in the environmental space, which enables it to fit complex distributions (e.g. nongaussian, bimodal, asymmetrical, etc.). (2) This density is modeled by computing the geometric mean to all observation points, which we show to be a good trade-off between goodness of fit and prediction power. (3) It does not need any absence information, which is generally difficult to collect and of dubious reliability. (4) The environmental space is represented either by an expert-selection of standardized variables or the axes of a factor analysis [in this paper we used the Ecological Niche Factor Analysis (ENFA)]. We first explain the details of the geometric mean algorithm and then we apply it to the bearded vulture (Gypaetus barbatus) habitat in the Swiss Alps. The results are compared to those obtained by the "median algorithm" and tested by jack-knife cross-validation. We also discuss other related algorithms (BIOCLIM, HABITAT, and DOMAIN). All these analyses were implemented into and performed with the ecology-oriented GIS software BIOMAPPER 2.0.The results show the geometric mean to perform better than the median algorithm, as it produces a tighter fit to the bimodal distribution of the bearded vulture in the environmental space. However, the "median algorithm" being quicker, it could be preferred when modeling more usual distribution.
Comparison of Three Optical Methods for Measuring Model Deformation
NASA Technical Reports Server (NTRS)
Burner, A. W.; Fleming, G. A.; Hoppe, J. C.
2000-01-01
The objective of this paper is to compare the current state-of-the-art of the following three optical techniques under study by NASA for measuring model deformation in wind tunnels: (1) video photogrammetry, (2) projection moire interferometry, and (3) the commercially available Optotrak system. An objective comparison of these three techniques should enable the selection of the best technique for a particular test undertaken at various NASA facilities. As might be expected, no one technique is best for all applications. The techniques are also not necessarily mutually exclusive and in some cases can be complementary to one another.
Neural Network method for Inverse Modeling of Material Deformation
Allen, J.D., Jr.; Ivezic, N.D.; Zacharia, T.
1999-07-10
A method is described for inverse modeling of material deformation in applications of importance to the sheet metal forming industry. The method was developed in order to assess the feasibility of utilizing empirical data in the early stages of the design process as an alternative to conventional prototyping methods. Because properly prepared and employed artificial neural networks (ANN) were known to be capable of codifying and generalizing large bodies of empirical data, they were the natural choice for the application. The product of the work described here is a desktop ANN system that can produce in one pass an accurate die design for a user-specified part shape.
USDA-ARS?s Scientific Manuscript database
Fractal and prefractal geometric models have substantial potential of contributing to the analysis of flow and transport in porous media such as soils and reservoir rocks. In this study, geometric and hydrodynamic parameters of saturated 3D mass and pore-solid prefractal porous media were characteri...
Telfer, Scott; Erdemir, Ahmet; Woodburn, James; Cavanagh, Peter R
2016-01-25
Integration of patient-specific biomechanical measurements into the design of therapeutic footwear has been shown to improve clinical outcomes in patients with diabetic foot disease. The addition of numerical simulations intended to optimise intervention design may help to build on these advances, however at present the time and labour required to generate and run personalised models of foot anatomy restrict their routine clinical utility. In this study we developed second-generation personalised simple finite element (FE) models of the forefoot with varying geometric fidelities. Plantar pressure predictions from barefoot, shod, and shod with insole simulations using simplified models were compared to those obtained from CT-based FE models incorporating more detailed representations of bone and tissue geometry. A simplified model including representations of metatarsals based on simple geometric shapes, embedded within a contoured soft tissue block with outer geometry acquired from a 3D surface scan was found to provide pressure predictions closest to the more complex model, with mean differences of 13.3kPa (SD 13.4), 12.52kPa (SD 11.9) and 9.6kPa (SD 9.3) for barefoot, shod, and insole conditions respectively. The simplified model design could be produced in <1h compared to >3h in the case of the more detailed model, and solved on average 24% faster. FE models of the forefoot based on simplified geometric representations of the metatarsal bones and soft tissue surface geometry from 3D surface scans may potentially provide a simulation approach with improved clinical utility, however further validity testing around a range of therapeutic footwear types is required.
Finite Element Model and Validation of Nasal Tip Deformation.
Manuel, Cyrus T; Harb, Rani; Badran, Alan; Ho, David; Wong, Brian J F
2017-03-01
Nasal tip mechanical stability is important for functional and cosmetic nasal airway surgery. Palpation of the nasal tip provides information on tip strength to the surgeon, though it is a purely subjective assessment. Providing a means to simulate nasal tip deformation with a validated model can offer a more objective approach in understanding the mechanics and nuances of the nasal tip support and eventual nasal mechanics as a whole. Herein we present validation of a finite element (FE) model of the nose using physical measurements recorded using an ABS plastic-silicone nasal phantom. Three-dimensional photogrammetry was used to capture the geometry of the phantom at rest and while under steady state load. The silicone used to make the phantom was mechanically tested and characterized using a linear elastic constitutive model. Surface point clouds of the silicone and FE model were compared for both the loaded and unloaded state. The average Hausdorff distance between actual measurements and FE simulations across the nose were 0.39 ± 1.04 mm and deviated up to 2 mm at the outermost boundaries of the model. FE simulation and measurements were in near complete agreement in the immediate vicinity of the nasal tip with millimeter accuracy. We have demonstrated validation of a two-component nasal FE model, which could be used to model more complex modes of deformation where direct measurement may be challenging. This is the first step in developing a nasal model to simulate nasal mechanics and ultimately the interaction between geometry and airflow.
Constitutive model for fiber-reinforced materials with deformable matrices.
Planas, J; Guinea, G V; Elices, M
2007-10-01
A great number of biological structures are composed of fibers (elastin, collagen, etc.) dispersed on an aqueous matrix in such a complex way that a detailed mechanical analysis based on microconstituents is, for practical purposes, out of reach. Consequently, the preferred approach to the mechanical behavior of these materials is based on setting up of constitutive equations that homogenize the behavior while capturing their main microstructural features. This work presents a simple macroscopic model for fiber-reinforced materials with deformable matrices, especially suited to many biological structural tissues. The constitutive equation is derived by imposing equivalence between the virtual works of both the fiber-reinforced and the equivalent continuum media, showing that it is independent of the control volume used for such equivalence. The model is particularized to incompressible materials, and an extension to orthotropic biological fibers is shown. Numerical simulations of uniaxial tests on silk fibers demonstrate the model's ability to capture the progressive alignment of the microconstituents under large deformations.
Modeling and Prediction of Hot Deformation Flow Curves
NASA Astrophysics Data System (ADS)
Mirzadeh, Hamed; Cabrera, Jose Maria; Najafizadeh, Abbas
2012-01-01
The modeling of hot flow stress and prediction of flow curves for unseen deformation conditions are important in metal-forming processes because any feasible mathematical simulation needs accurate flow description. In the current work, in an attempt to summarize, generalize, and introduce efficient methods, the dynamic recrystallization (DRX) flow curves of a 17-4 PH martensitic precipitation hardening stainless steel, a medium carbon microalloyed steel, and a 304 H austenitic stainless steel were modeled and predicted using (1) a hyperbolic sine equation with strain dependent constants, (2) a developed constitutive equation in a simple normalized stress-normalized strain form and its modified version, and (3) a feed-forward artificial neural network (ANN). These methods were critically discussed, and the ANN technique was found to be the best for the modeling available flow curves; however, the developed constitutive equation showed slightly better performance than that of ANN and significantly better predicted values than those of the hyperbolic sine equation in prediction of flow curves for unseen deformation conditions.
NASA Astrophysics Data System (ADS)
Lin, Y. K.; Ke, M. C.; Ke, S. S.
2016-12-01
An active fault is commonly considered to be active if they have moved one or more times in the last 10,000 years and likely to have another earthquake sometime in the future. The relationship between the fault reactivation and the surface deformation after the Chi-Chi earthquake (M=7.2) in 1999 has been concerned up to now. According to the investigations of well-known disastrous earthquakes in recent years, indicated that surface deformation is controlled by the 3D fault geometric shape. Because the surface deformation may cause dangerous damage to critical infrastructures, buildings, roads, power, water and gas lines etc. Therefore it's very important to make pre-disaster risk assessment via the 3D active fault model to decrease serious economic losses, people injuries and deaths caused by large earthquake. The approaches to build up the 3D active fault model can be categorized as (1) field investigation (2) digitized profile data and (3) build the 3D modeling. In this research, we tracked the location of the fault scarp in the field first, then combined the seismic profiles (had been balanced) and historical earthquake data to build the underground fault plane model by using SKUA-GOCAD program. Finally compared the results come from trishear model (written by Richard W. Allmendinger, 2012) and PFC-3D program (Itasca) and got the calculated range of the deformation area. By analysis of the surface deformation area made from Hsin-Chu Fault, we concluded the result the damage zone is approaching 68 286m, the magnitude is 6.43, the offset is 0.6m. base on that to estimate the population casualties, building damage by the M=6.43 earthquake in Hsin-Chu area, Taiwan. In the future, in order to be applied accurately on earthquake disaster prevention, we need to consider further the groundwater effect and the soil structure interaction inducing by faulting.
Complex transformation field created by geometrical gradient design of NiTi shape memory alloy
NASA Astrophysics Data System (ADS)
Bakhtiari, Reza; Shariat, Bashir S.; Motazedian, Fakhrodin; Wu, Zhigang; Zhang, Junsong; Yang, Hong; Liu, Yinong
Owing to geometrical non-uniformity, geometrically graded shape memory alloy (SMA) structures by design have the ability to exhibit different and novel thermal and mechanical behaviors compared to geometrically uniform conventional SMAs. This paper reports a study of the pseudoelastic behavior of geometrically graded NiTi plates. This geometrical gradient creates partial stress gradient over stress-induced martensitic transformation, providing enlarged stress controlling interval for shape memory actuation. Finite element modeling framework has been established to predict the deformation behavior of such structures in tensile loading cycles, which was validated by experiments. The modeling results show that the transformation mostly propagates along the gradient direction as the loading level increases.
Multiple unfoldings of orbifold singularities: Engineering geometric analogies to unification
Bourjaily, Jacob L.
2009-02-15
Katz and Vafa [Nucl. Phys. B497, 146 (1997)] showed how charged matter can arise geometrically by the deformation of ADE-type orbifold singularities in type IIa, M-theory, and F-theory compactifications. In this paper we use those same basic ingredients, used there to geometrically engineer specific matter representations, here to deform the compactification manifold itself in a way which naturally compliments many features of unified model building. We realize this idea explicitly by deforming a manifold engineered to give rise to an SU{sub 5} grand unified model into a one giving rise to the standard model. In this framework, the relative local positions of the singularities giving rise to standard model fields are specified in terms of the values of a small number of complex structure moduli which deform the original manifold, greatly reducing the arbitrariness of their relative positions.
Scaling of geometric phase versus band structure in cluster-Ising models
NASA Astrophysics Data System (ADS)
Nie, Wei; Mei, Feng; Amico, Luigi; Kwek, Leong Chuan
2017-08-01
We study the phase diagram of a class of models in which a generalized cluster interaction can be quenched by an Ising exchange interaction and external magnetic field. The various phases are studied through winding numbers. They may be ordinary phases with local order parameters or exotic ones, known as symmetry protected topologically ordered phases. Quantum phase transitions with dynamical critical exponents z =1 or z =2 are found. In particular, the criticality is analyzed through finite-size scaling of the geometric phase accumulated when the spins of the lattice perform an adiabatic precession. With this study, we quantify the scaling behavior of the geometric phase in relation to the topology and low-energy properties of the band structure of the system.
Monte Carlo based geometrical model for efficiency calculation of an n-type HPGe detector.
Cabal, Fatima Padilla; Lopez-Pino, Neivy; Bernal-Castillo, Jose Luis; Martinez-Palenzuela, Yisel; Aguilar-Mena, Jimmy; D'Alessandro, Katia; Arbelo, Yuniesky; Corrales, Yasser; Diaz, Oscar
2010-12-01
A procedure to optimize the geometrical model of an n-type detector is described. Sixteen lines from seven point sources ((241)Am, (133)Ba, (22)Na, (60)Co, (57)Co, (137)Cs and (152)Eu) placed at three different source-to-detector distances (10, 20 and 30 cm) were used to calibrate a low-background gamma spectrometer between 26 and 1408 keV. Direct Monte Carlo techniques using the MCNPX 2.6 and GEANT 4 9.2 codes, and a semi-empirical procedure were performed to obtain theoretical efficiency curves. Since discrepancies were found between experimental and calculated data using the manufacturer parameters of the detector, a detail study of the crystal dimensions and the geometrical configuration is carried out. The relative deviation with experimental data decreases from a mean value of 18-4%, after the parameters were optimized.
Statistical Modeling of CTV Motion and Deformation for IMRT of Early-Stage Rectal Cancer
Bondar, Luiza; Intven, Martijn; Burbach, J.P. Maarten; Budiarto, Eka; Kleijnen, Jean-Paul; Philippens, Marielle; Asselen, Bram van; Seravalli, Enrica; Reerink, Onne; Raaymakers, Bas
2014-11-01
Purpose: To derive and validate a statistical model of motion and deformation for the clinical target volume (CTV) of early-stage rectal cancer patients. Methods and Materials: For 16 patients, 4 to 5 magnetic resonance images (MRI) were acquired before each fraction was administered. The CTV was delineated on each MRI. Using a leave-one-out methodology, we constructed a population-based principal component analysis (PCA) model of the CTV motion and deformation of 15 patients, and we tested the model on the left-out patient. The modeling error was calculated as the amount of the CTV motion-deformation of the left-out-patient that could not be explained by the PCA model. Next, the PCA model was used to construct a PCA target volume (PCA-TV) by accumulating motion-deformations simulated by the model. A PCA planning target volume (PTV) was generated by expanding the PCA-TV by uniform margins. The PCA-PTV was compared with uniform and nonuniform CTV-to-PTV margins. To allow comparison, geometric margins were determined to ensure adequate coverage, and the volume difference between the PTV and the daily CTV (CTV-to-PTV volume) was calculated. Results: The modeling error ranged from 0.9 ± 0.5 to 2.9 ± 2.1 mm, corresponding to a reduction of the CTV motion-deformation between 6% and 60% (average, 23% ± 11%). The reduction correlated with the magnitude of the CTV motion-deformation (P<.001, R=0.66). The PCA-TV and the CTV required 2-mm and 7-mm uniform margins, respectively. The nonuniform CTV-to-PTV margins were 4 mm in the left, right, inferior, superior, and posterior directions and 8 mm in the anterior direction. Compared to uniform and nonuniform CTV-to-PTV margins, the PCA-based PTV significantly decreased (P<.001) the average CTV-to-PTV volume by 128 ± 20 mL (49% ± 4%) and by 35 ± 6 mL (20% ± 3.5%), respectively. Conclusions: The CTV motion-deformation of a new patient can be explained by a population-based PCA model. A PCA model
Rios, Richard; De Crevoisier, Renaud; Ospina, Juan D; Commandeur, Frederic; Lafond, Caroline; Simon, Antoine; Haigron, Pascal; Espinosa, Jairo; Acosta, Oscar
2017-05-01
In radiotherapy for prostate cancer irradiation of neighboring organs at risk may lead to undesirable side-effects. Given this setting, the bladder presents the largest inter-fraction shape variations hampering the computation of the actual delivered dose vs. planned dose. This paper proposes a population model, based on longitudinal data, able to estimate the probability of bladder presence during treatment, using only the planning computed tomography (CT) scan as input information. As in previously-proposed principal component analysis (PCA) population-based models, we have used the data to obtain the dominant eigenmodes that describe bladder geometric variations between fractions. However, we have used a longitudinal analysis along each mode in order to properly characterize patient's variance from the total population variance. We have proposed is a mixed-effects (ME) model in order to separate intra- and inter-patient variability, in an effort to control confounding cohort effects. Other than using PCA, bladder shapes are represented by using spherical harmonics (SPHARM) that additionally enables data compression without information lost. Based on training data from repeated CT scans, the ME model was thus implemented following dimensionality reduction by means of SPHARM and PCA. We have evaluated the model in a leave-one-out cross validation framework on the training data but also using independent data. Probability maps (PMs) were thus generated with several draws from the learnt model as predicted regions where the bladder will likely move and deform. These PMs were compared with the actual regions using metrics based on mutual information distance and misestimated voxels. The prediction was also compared with two previous population PCA-based models. The proposed model was able to reduce the uncertainties in the estimation of the probable region of bladder motion and deformation. This model can thus be used for tailoring radiotherapy treatments. Copyright
Tian, Liang; Russell, Alan; Anderson, Iver
2014-01-03
Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. A dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with our experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts themore » strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.« less
Tian, Liang; Russell, Alan; Anderson, Iver
2014-01-03
Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. In this article, a dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with the experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts the strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.
Tian, Liang; Russell, Alan; Anderson, Iver
2014-01-03
Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. A dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with our experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts the strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.
Multi-view and 3D deformable part models.
Pepik, Bojan; Stark, Michael; Gehler, Peter; Schiele, Bernt
2015-11-01
As objects are inherently 3D, they have been modeled in 3D in the early days of computer vision. Due to the ambiguities arising from mapping 2D features to 3D models, 3D object representations have been neglected and 2D feature-based models are the predominant paradigm in object detection nowadays. While such models have achieved outstanding bounding box detection performance, they come with limited expressiveness, as they are clearly limited in their capability of reasoning about 3D shape or viewpoints. In this work, we bring the worlds of 3D and 2D object representations closer, by building an object detector which leverages the expressive power of 3D object representations while at the same time can be robustly matched to image evidence. To that end, we gradually extend the successful deformable part model [1] to include viewpoint information and part-level 3D geometry information, resulting in several different models with different level of expressiveness. We end up with a 3D object model, consisting of multiple object parts represented in 3D and a continuous appearance model. We experimentally verify that our models, while providing richer object hypotheses than the 2D object models, provide consistently better joint object localization and viewpoint estimation than the state-of-the-art multi-view and 3D object detectors on various benchmarks (KITTI [2] , 3D object classes [3] , Pascal3D+ [4] , Pascal VOC 2007 [5] , EPFL multi-view cars[6] ).
Modeling Permanent Deformations of Superelastic and Shape Memory Materials
Urbano, Marco Fabrizio; Auricchio, Ferdinando
2015-01-01
In this paper we propose a modification of the polycrystalline shape memory alloy constitutive model originally proposed by Souza. By introducing a transformation strain energy with two different hardening coefficients, we are able to take into account the effect of the martensitic transformation of unfavorably oriented grains occurring after the main plateau. By choosing a proper second hardening coefficient, it is possible to reproduce the correct stress strain behavior of the material after the plateau without the need of introducing a much smaller Young modulus for martensite. The proposed modification is introduced in the model comprising permanent deformation effects. Model results for uniaxial stress tests are compared to experimental results showing good agreement. PMID:26110494
Shell-model-based deformation analysis of light cadmium isotopes
NASA Astrophysics Data System (ADS)
Schmidt, T.; Heyde, K. L. G.; Blazhev, A.; Jolie, J.
2017-07-01
Large-scale shell-model calculations for the even-even cadmium isotopes 98Cd-108Cd have been performed with the antoine code in the π (2 p1 /2;1 g9 /2) ν (2 d5 /2;3 s1 /2;2 d3 /2;1 g7 /2;1 h11 /2) model space without further truncation. Known experimental energy levels and B (E 2 ) values could be well reproduced. Taking these calculations as a starting ground we analyze the deformation parameters predicted for the Cd isotopes as a function of neutron number N and spin J using the methods of model independent invariants introduced by Kumar [Phys. Rev. Lett. 28, 249 (1972), 10.1103/PhysRevLett.28.249] and Cline [Annu. Rev. Nucl. Part. Sci. 36, 683 (1986), 10.1146/annurev.ns.36.120186.003343].
Automated 3D motion tracking using Gabor filter bank, robust point matching, and deformable models.
Chen, Ting; Wang, Xiaoxu; Chung, Sohae; Metaxas, Dimitris; Axel, Leon
2010-01-01
Tagged magnetic resonance imaging (tagged MRI or tMRI) provides a means of directly and noninvasively displaying the internal motion of the myocardium. Reconstruction of the motion field is needed to quantify important clinical information, e.g., the myocardial strain, and detect regional heart functional loss. In this paper, we present a three-step method for this task. First, we use a Gabor filter bank to detect and locate tag intersections in the image frames, based on local phase analysis. Next, we use an improved version of the robust point matching (RPM) method to sparsely track the motion of the myocardium, by establishing a transformation function and a one-to-one correspondence between grid tag intersections in different image frames. In particular, the RPM helps to minimize the impact on the motion tracking result of 1) through-plane motion and 2) relatively large deformation and/or relatively small tag spacing. In the final step, a meshless deformable model is initialized using the transformation function computed by RPM. The model refines the motion tracking and generates a dense displacement map, by deforming under the influence of image information, and is constrained by the displacement magnitude to retain its geometric structure. The 2D displacement maps in short and long axis image planes can be combined to drive a 3D deformable model, using the moving least square method, constrained by the minimization of the residual error at tag intersections. The method has been tested on a numerical phantom, as well as on in vivo heart data from normal volunteers and heart disease patients. The experimental results show that the new method has a good performance on both synthetic and real data. Furthermore, the method has been used in an initial clinical study to assess the differences in myocardial strain distributions between heart disease (left ventricular hypertrophy) patients and the normal control group. The final results show that the proposed method
Automated 3D Motion Tracking using Gabor Filter Bank, Robust Point Matching, and Deformable Models
Wang, Xiaoxu; Chung, Sohae; Metaxas, Dimitris; Axel, Leon
2013-01-01
Tagged Magnetic Resonance Imaging (tagged MRI or tMRI) provides a means of directly and noninvasively displaying the internal motion of the myocardium. Reconstruction of the motion field is needed to quantify important clinical information, e.g., the myocardial strain, and detect regional heart functional loss. In this paper, we present a three-step method for this task. First, we use a Gabor filter bank to detect and locate tag intersections in the image frames, based on local phase analysis. Next, we use an improved version of the Robust Point Matching (RPM) method to sparsely track the motion of the myocardium, by establishing a transformation function and a one-to-one correspondence between grid tag intersections in different image frames. In particular, the RPM helps to minimize the impact on the motion tracking result of: 1) through-plane motion, and 2) relatively large deformation and/or relatively small tag spacing. In the final step, a meshless deformable model is initialized using the transformation function computed by RPM. The model refines the motion tracking and generates a dense displacement map, by deforming under the influence of image information, and is constrained by the displacement magnitude to retain its geometric structure. The 2D displacement maps in short and long axis image planes can be combined to drive a 3D deformable model, using the Moving Least Square method, constrained by the minimization of the residual error at tag intersections. The method has been tested on a numerical phantom, as well as on in vivo heart data from normal volunteers and heart disease patients. The experimental results show that the new method has a good performance on both synthetic and real data. Furthermore, the method has been used in an initial clinical study to assess the differences in myocardial strain distributions between heart disease (left ventricular hypertrophy) patients and the normal control group. The final results show that the proposed method
Modelling Polymer Deformation and Welding Behaviour during 3D Printing
NASA Astrophysics Data System (ADS)
McIlroy, Claire; Olmsted, Peter
2016-11-01
3D printing has the potential to transform manufacturing processes, yet improving the strength of printed parts, to equal that of traditionally-manufactured parts, remains an underlying issue. The most common method, fused deposition modelling, involves melting a thermoplastic, followed by layer-by-layer extrusion of the material to fabricate a three-dimensional object. The key to the ensuring strength at the weld between these layers is successful inter-diffusion. However, as the printed layer cools towards the glass transition temperature, the time available for diffusion is limited. In addition, the extrusion process significantly deforms the polymer micro-structure prior to welding and consequently affects how the polymers "re-entangle" across the weld. We have developed a simple model of the non-isothermal printing process to explore the effects that typical printing conditions and amorphous polymer rheology have on the ultimate weld structure. In particular, we incorporate both the stretch and orientation of the polymer using the Rolie-Poly constitutive equation to examine how the melt flows through the nozzle and is deposited onto the build plate. We then address how this deformation relaxes and contributes to the thickness and structure of the weld. National Institute for Standards and Technology (NIST) and Georgetown University.
Analysis of deformable image registration accuracy using computational modeling
Zhong Hualiang; Kim, Jinkoo; Chetty, Indrin J.
2010-03-15
Computer aided modeling of anatomic deformation, allowing various techniques and protocols in radiation therapy to be systematically verified and studied, has become increasingly attractive. In this study the potential issues in deformable image registration (DIR) were analyzed based on two numerical phantoms: One, a synthesized, low intensity gradient prostate image, and the other a lung patient's CT image data set. Each phantom was modeled with region-specific material parameters with its deformation solved using a finite element method. The resultant displacements were used to construct a benchmark to quantify the displacement errors of the Demons and B-Spline-based registrations. The results show that the accuracy of these registration algorithms depends on the chosen parameters, the selection of which is closely associated with the intensity gradients of the underlying images. For the Demons algorithm, both single resolution (SR) and multiresolution (MR) registrations required approximately 300 iterations to reach an accuracy of 1.4 mm mean error in the lung patient's CT image (and 0.7 mm mean error averaged in the lung only). For the low gradient prostate phantom, these algorithms (both SR and MR) required at least 1600 iterations to reduce their mean errors to 2 mm. For the B-Spline algorithms, best performance (mean errors of 1.9 mm for SR and 1.6 mm for MR, respectively) on the low gradient prostate was achieved using five grid nodes in each direction. Adding more grid nodes resulted in larger errors. For the lung patient's CT data set, the B-Spline registrations required ten grid nodes in each direction for highest accuracy (1.4 mm for SR and 1.5 mm for MR). The numbers of iterations or grid nodes required for optimal registrations depended on the intensity gradients of the underlying images. In summary, the performance of the Demons and B-Spline registrations have been quantitatively evaluated using numerical phantoms. The results show that parameter
Continuum modeling of deformation and aggregation of red blood cells.
Yoon, Daegeun; You, Donghyun
2016-07-26
In order to gain better understanding for rheology of an isolated red blood cell (RBC) and a group of multiple RBCs, new continuum models for describing mechanical properties of cellular structures of an RBC and inter-cellular interactions among multiple RBCs are developed. The viscous property of an RBC membrane, which characterizes dynamic behaviors of an RBC under stress loading and unloading processes, is determined using a generalized Maxwell model. The present model is capable of predicting stress relaxation and stress-strain hysteresis, of which prediction is not possible using the commonly used Kelvin-Voigt model. Nonlinear elasticity of an RBC is determined using the Yeoh hyperelastic material model in a framework of continuum mechanics using finite-element approximation. A novel method to model inter-cellular interactions among multiple adjacent RBCs is also developed. Unlike the previous modeling approaches for aggregation of RBCs, where interaction energy for aggregation is curve-fitted using a Morse-type potential function, the interaction energy is analytically determined. The present aggregation model, therefore, allows us to predict various effects of physical parameters such as the osmotic pressure, the thickness of a glycocalyx layer, the penetration depth, and the permittivity, on the depletion and electrostatic energy among RBCs. Simulations for elongation and recovery deformation of an RBC and for aggregation of multiple RBCs are conducted to evaluate the efficacy of the present continuum modeling methods. Copyright © 2015 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Invernizzi, Davide; Dozio, Lorenzo
2016-05-01
The equations of motions governing the free vibrations of prismatic slender beams rotating in a plane at constant angular velocity are derived according to a geometrically exact approach. Compared to other modeling methods, additional stiffening terms induced by pre-stress are found in the dynamic equations after fully consistent linearization about the deformed equilibrium configuration. These terms include axial, bending and torsional stiffening effects which arise when second-order generalized strains are retained. It is shown that their contribution becomes relevant at moderate to high angular speeds, where high means that the equilibrium state is subject to strains close to the limit where a physically linear constitutive law still applies. In particular, the importance of the axial stiffening is specifically investigated. The natural frequencies as a function of the angular velocity and other system parameters are computed and compared with benchmark cases available in the literature. Finally, the error on the modal characteristics of the rotating beam is evaluated when the linearization is carried out about the undeformed configuration.
Modelling couplings between reaction, fluid flow and deformation: Kinetics
NASA Astrophysics Data System (ADS)
Malvoisin, Benjamin; Podladchikov, Yury Y.; Connolly, James A. D.
2016-04-01
Mineral assemblages out of equilibrium are commonly found in metamorphic rocks testifying of the critical role of kinetics for metamorphic reactions. As experimentally determined reaction rates in fluid-saturated systems generally indicate complete reaction in less than several years, i.e. several orders of magnitude faster than field-based estimates, metamorphic reaction kinetics are generally thought to be controlled by transport rather than by processes at the mineral surface. However, some geological processes like earthquakes or slow-slip events have shorter characteristic timescales, and transport processes can be intimately related to mineral surface processes. Therefore, it is important to take into account the kinetics of mineral surface processes for modelling fluid/rock interactions. Here, a model coupling reaction, fluid flow and deformation was improved by introducing a delay in the achievement of equilibrium. The classical formalism for dissolution/precipitation reactions was used to consider the influence of the distance from equilibrium and of temperature on the reaction rate, and a dependence on porosity was introduced to model evolution of reacting surface area during reaction. The fitting of experimental data for three reactions typically occurring in metamorphic systems (serpentine dehydration, muscovite dehydration and calcite decarbonation) indicates a systematic faster kinetics close from equilibrium on the dehydration side than on the hydration side. This effect is amplified through the porosity term in the reaction rate since porosity is formed during dehydration. Numerical modelling indicates that this difference in reaction rate close from equilibrium plays a key role in microtextures formation. The developed model can be used in a wide variety of geological systems where couplings between reaction, deformation and fluid flow have to be considered.
Geometric-optical bidirectional reflectance modeling of a conifer forest canopy
NASA Technical Reports Server (NTRS)
Li, X.; Strahler, A. H.
1986-01-01
A geometric-optical forest canopy model that treats conifers as cones casting shadows on a contrasting background explains the major anisotropies in bidirectional reflectance measurements of a conifer forest canopy. The model uses parallel-ray geometry to describe the illumination and viewing of conifers as three-dimensional cones. Both computer simulation and analytical closed-form expressions are implemented. The results show a good qualitative agreement with the directional reflectance measurements of the conifer stand, indicating that the three-dimensional nature of the canopy is a key factor in determining its directional reflectance.
Honzík, Petr; Podkovskiy, Alexey; Durand, Stéphane; Joly, Nicolas; Bruneau, Michel
2013-11-01
The main purpose of the paper is to contribute at presenting an analytical and a numerical modeling which would be relevant for interpreting the couplings between a circular membrane, a peripheral cavity having the same external radius as the membrane, and a thin air gap (with a geometrical discontinuity between them), and then to characterize small scale electrostatic receivers and to propose procedures that could be suitable for fitting adjustable parameters to achieve optimal behavior in terms of sensitivity and bandwidth expected. Therefore, comparison between these theoretical methods and characterization of several shapes is dealt with, which show that the models would be appropriate to address the design of such transducers.
Modal Substructuring of Geometrically Nonlinear Finite Element Models with Interface Reduction
Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.
2017-03-29
Substructuring methods have been widely used in structural dynamics to divide large, complicated finite element models into smaller substructures. For linear systems, many methods have been developed to reduce the subcomponents down to a low order set of equations using a special set of component modes, and these are then assembled to approximate the dynamics of a large scale model. In this paper, a substructuring approach is developed for coupling geometrically nonlinear structures, where each subcomponent is drastically reduced to a low order set of nonlinear equations using a truncated set of fixedinterface and characteristic constraint modes. The method usedmore » to extract the coefficients of the nonlinear reduced order model (NLROM) is non-intrusive in that it does not require any modification to the commercial FEA code, but computes the NLROM from the results of several nonlinear static analyses. The NLROMs are then assembled to approximate the nonlinear differential equations of the global assembly. The method is demonstrated on the coupling of two geometrically nonlinear plates with simple supports at all edges. The plates are joined at a continuous interface through the rotational degrees-of-freedom (DOF), and the nonlinear normal modes (NNMs) of the assembled equations are computed to validate the models. The proposed substructuring approach reduces a 12,861 DOF nonlinear finite element model down to only 23 DOF, while still accurately reproducing the first three NNMs of the full order model.« less
Variable-intercept panel model for deformation zoning of a super-high arch dam.
Shi, Zhongwen; Gu, Chongshi; Qin, Dong
2016-01-01
This study determines dam deformation similarity indexes based on an analysis of deformation zoning features and panel data clustering theory, with comprehensive consideration to the actual deformation law of super-high arch dams and the spatial-temporal features of dam deformation. Measurement methods of these indexes are studied. Based on the established deformation similarity criteria, the principle used to determine the number of dam deformation zones is constructed through entropy weight method. This study proposes the deformation zoning method for super-high arch dams and the implementation steps, analyzes the effect of special influencing factors of different dam zones on the deformation, introduces dummy variables that represent the special effect of dam deformation, and establishes a variable-intercept panel model for deformation zoning of super-high arch dams. Based on different patterns of the special effect in the variable-intercept panel model, two panel analysis models were established to monitor fixed and random effects of dam deformation. Hausman test method of model selection and model effectiveness assessment method are discussed. Finally, the effectiveness of established models is verified through a case study.
Hosseinabadi, S; Rajabpour, M A; Movahed, M Sadegh; Allaei, S M Vaez
2012-03-01
In this paper, we study many geometrical properties of contour loops to characterize the morphology of synthetic multifractal rough surfaces, which are generated by multiplicative hierarchical cascading processes. To this end, two different classes of multifractal rough surfaces are numerically simulated. As the first group, singular measure multifractal rough surfaces are generated by using the p model. The smoothened multifractal rough surface then is simulated by convolving the first group with a so-called Hurst exponent, H*. The generalized multifractal dimension of isoheight lines (contours), D(q), correlation exponent of contours, x(l), cumulative distributions of areas, ξ, and perimeters, η, are calculated for both synthetic multifractal rough surfaces. Our results show that for both mentioned classes, hyperscaling relations for contour loops are the same as that of monofractal systems. In contrast to singular measure multifractal rough surfaces, H* plays a leading role in smoothened multifractal rough surfaces. All computed geometrical exponents for the first class depend not only on its Hurst exponent but also on the set of p values. But in spite of multifractal nature of smoothened surfaces (second class), the corresponding geometrical exponents are controlled by H*, the same as what happens for monofractal rough surfaces.
Development of a 10-year-old full body geometric dataset for computational modeling.
Mao, Haojie; Holcombe, Sven; Shen, Ming; Jin, Xin; Wagner, Christina D; Wang, Stewart C; Yang, King H; King, Albert I
2014-10-01
The objective of this study was to create a computer-aided design (CAD) geometric dataset of a 10-year-old (10 YO) child. The study includes two phases of efforts. At Phase One, the 10 YO whole body CAD was developed from component computed tomography and magnetic resonance imaging scans of 12 pediatric subjects. Geometrical scaling methods were used to convert all component parts to the average size for a 10 YO child, based on available anthropometric data. Then the component surfaces were compiled and integrated into a complete body. The bony structures and flesh were adjusted as symmetrical to minimize the bias from a single subject while maintaining anthropometrical measurements. Internal organs including the liver, spleen, and kidney were further verified by literature data. At Phase Two, internal characteristics for the cervical spine disc, wrist, hand, pelvis, femur, and tibia were verified with data measured from additional 94 10 YO children. The CAD dataset developed through these processes was mostly within the corridor of one standard deviation (SD) of the mean. In conclusion, a geometric dataset for an average size 10 YO child was created. The dataset serves as a foundation to develop computational 10 YO whole body models for enhanced pediatric injury prevention.
The geometric signature: Quantifying landslide-terrain types from digital elevation models
Pike, R.J.
1988-01-01
Topography of various types and scales can be fingerprinted by computer analysis of altitude matrices (digital elevation models, or DEMs). The critical analytic tool is the geometric signature, a set of measures that describes topographic form well enough to distinguish among geomorphically disparate landscapes. Different surficial processes create topography with diagnostic forms that are recognizable in the field. The geometric signature abstracts those forms from contour maps or their DEMs and expresses them numerically. This multivariate characterization enables once-in-tractable problems to be addressed. The measures that constitute a geometric signature express different but complementary attributes of topographic form. Most parameters used here are statistical estimates of central tendency and dispersion for five major categories of terrain geometry; altitude, altitude variance spectrum, slope between slope reversals, and slope and its curvature at fixed slope lengths. As an experimental application of geometric signatures, two mapped terrain types associated with different processes of shallow landsliding in Marin County, California, were distinguished consistently by a 17-variable description of topography from 21??21 DEMs (30-m grid spacing). The small matrix is a statistical window that can be used to scan large DEMs by computer, thus potentially automating the mapping of contrasting terrain types. The two types in Marin County host either (1) slow slides: earth flows and slump-earth flows, or (2) rapid flows: debris avalanches and debris flows. The signature approach should adapt to terrain taxonomy and mapping in other areas, where conditions differ from those in Central California. ?? 1988 International Association for Mathematical Geology.
On the Modeling of Plastic Deformation of Magnesium Alloys
NASA Astrophysics Data System (ADS)
Ertürk, S.; Steglich, D.; Bohlen, J.; Letzig, D.; Brocks, W.
2007-05-01
Magnesium alloys are promising materials due to their low density and therefore high specific strength. However, the industrial application is not well established so far, especially for wrought products such as sheets or profiles. Due to its hexagonal crystallographic structure, deformation mechanisms observed in magnesium alloys are rather different from those in face centered cubic metals such as aluminum alloys. This leads not only to a mechanical anisotropy, but also to a tension-compression asymmetry, i.e. unequal compressive and tensile yield strength. The resulting complexity in the yielding behavior of such materials cannot be captured by conventional models of J2 plasticity. Cazacu and Barlat, therefore, proposed a phenomenological yield potential which accounts for the respective phenomena by introducing the third invariant of the stress tensor. Simulations based on this model are performed with ABAQUS/Explicit and a user defined routine VUMAT for validating the respective implementation. The application aims at simulating the extrusion process of magnesium alloys.
Modeling cellular deformations using the level set formalism
Yang, Liu; Effler, Janet C; Kutscher, Brett L; Sullivan, Sarah E; Robinson, Douglas N; Iglesias, Pablo A
2008-01-01
Background Many cellular processes involve substantial shape changes. Traditional simulations of these cell shape changes require that grids and boundaries be moved as the cell's shape evolves. Here we demonstrate that accurate cell shape changes can be recreated using level set methods (LSM), in which the cellular shape is defined implicitly, thereby eschewing the need for updating boundaries. Results We obtain a viscoelastic model of Dictyostelium cells using micropipette aspiration and show how this viscoelastic model can be incorporated into LSM simulations to recreate the observed protrusion of cells into the micropipette faithfully. We also demonstrate the use of our techniques by simulating the cell shape changes elicited by the chemotactic response to an external chemoattractant gradient. Conclusion Our results provide a simple but effective means of incorporating cellular deformations into mathematical simulations of cell signaling. Such methods will be useful for simulating important cellular events such as chemotaxis and cytokinesis. PMID:18652669
Modeling level structures of odd-odd deformed nuclei
Hoff, R.W.; Kern, J.; Piepenbring, R.; Boisson, J.P.
1985-01-15
A technique for modeling quasiparticle excitation energies and rotational parameters in odd-odd deformed nuclei has been applied to actinide species where new experimental data have been obtained by use of neutron-capture gamma-ray spectroscopy. The input parameters required for the calculation were derived from empirical data on single-particle excitations in neighboring odd-mass nuclei. Calculated configuration-specific values for the Gallagher-Moszkowski splittings were used. Calculated and experimental level structures for /sup 238/Np, /sup 244/Am, and /sup 250/Bk are compared, as well as those for several nuclei in the rare-earch region. The agreement for the actinide species is excellent, with bandhead energies deviating 22 keV and rotational parameters 5%, on the average. Corresponding average deviations for five rare-earth nuclei are 47 keV and 7%. Several applications of this modeling technique are discussed.
Modeling level structures of odd-odd deformed nuclei
Hoff, R.W.; Kern, J.; Piepenbring, R.; Boisson, J.P.
1984-09-07
A technique for modeling quasiparticle excitation energies and rotational parameters in odd-odd deformed nuclei has been applied to actinide species where new experimental data have been obtained by use of neutron-capture gamma-ray spectroscopy. The input parameters required for the calculation were derived from empirical data on single-particle excitations in neighboring odd-mass nuclei. Calculated configuration-specific values for the Gallagher-Moszkowski splittings were used. Calculated and experimental level structures for /sup 238/Np, /sup 244/Am, and /sup 250/Bk are compared, as well as those for several nuclei in the rare-earth region. The agreement for the actinide species is excellent, with bandhead energies deviating 22 keV and rotational parameters 5%, on the average. Corresponding average deviations for five rare-earth nuclei are 47 keV and 7%. Several applications of this modeling technique are discussed. 18 refs., 5 figs., 4 tabs.
On the Modeling of Plastic Deformation of Magnesium Alloys
Ertuerk, S.; Steglich, D.; Bohlen, J.; Letzig, D.; Brocks, W.
2007-05-17
Magnesium alloys are promising materials due to their low density and therefore high specific strength. However, the industrial application is not well established so far, especially for wrought products such as sheets or profiles. Due to its hexagonal crystallographic structure, deformation mechanisms observed in magnesium alloys are rather different from those in face centered cubic metals such as aluminum alloys. This leads not only to a mechanical anisotropy, but also to a tension-compression asymmetry, i.e. unequal compressive and tensile yield strength. The resulting complexity in the yielding behavior of such materials cannot be captured by conventional models of J2 plasticity. Cazacu and Barlat, therefore, proposed a phenomenological yield potential which accounts for the respective phenomena by introducing the third invariant of the stress tensor. Simulations based on this model are performed with ABAQUS/Explicit and a user defined routine VUMAT for validating the respective implementation. The application aims at simulating the extrusion process of magnesium alloys.
A geometric model for excavation and modification at terrestrial simple impact craters
NASA Technical Reports Server (NTRS)
Grieve, R. A. F.; Garvin, J. B.
1984-01-01
A geometric model for the excavation and modification stages of simple crater development is presented. Cavity modification is modelled from an analytical derivation of the dimensions of the so-called transient cavity (Dence, 1973; Dence et al., 1977). The final cavity as it appears in terrestrial craters and the primary elements of excavation are approximated by a variation of the so-called Z model. The applicability of the model is tested with data from the Meteor and Brent craters. In the case of Meteor, the modelled final crater diameter at the original ground plane is within 26 m of the observed value and the modelled breccia lens and the rim crest volumes of the final true crater are within 9.5 percent and 2.5 percent, respectively, of the observed values. The correspondence for the more degraded Brent crater is less precise.
NASA Astrophysics Data System (ADS)
Mercier, Patrick H. J.
Seventy-five synthetic powder trioctahedral mica samples (between Mg, Co, Ni, and Fe end members, with different degrees of oxidation, vacancy and Al/Si contents, and including an OH/F substitution series) were studied by room-temperature powder X-ray diffraction. The iron-bearing samples were studied by 57Fe Mossbauer spectroscopy. Subsets of the samples were also characterized by scanning electron microscopy combined with energy dispersive spectroscopy, optical microscopy, X-ray fluorescence spectroscopy, and gas chromatography. Lattice parameters (refined under the 1M stacking polytype, space group C2/m) were determined for all powder samples and iron site populations ([4]Fe 3+, [6]Fe2+, and [6]Fe 2+) were obtained from Mossbauer spectroscopy. The relation (c/a)cosbeta* = 113 was found to hold exactly (within experimental error) for all synthetic powders whereas it does not hold in general for synthetic and natural 1M single-crystals. The above relation is predicted to hold for geometric home-octahedral sheets (having equal M1 and M2 site bond lengths) and not to hold for geometric meso-octahedral sheets (having unequal M1 and M2 site bond lengths). The counter-rotation of the M2 site of 1M single-crystals exactly (within experimental error) follows the geometric meso-octahedral sheet model, which, assuming a uniform octahedral sheet height and site-specific M1 and M2 bond lengths, predicts site-specific flattening angles and a counter-rotation angle for the M2 site which is uniquely determined by the bond length difference between the M1 and M2 sites. A geometric meso-octahedral 2:1 layer silicate was shown to require corrugated tetrahedral sheets composed of bond-distorted tetrahedra. Key geometric meso-octahedral distortions in 1M single-crystals were identified and elucidated: (i) intra-layer top-bottom displacements within a TOT layer; and (ii) a tetrahedral bending angle between the apical bond and the pyramidal base formed by the three basal bonds. Plots
Sheynikhovich, Denis; Arleo, Angelo
2010-12-13
In contrast to predictions derived from the associative learning theory, a number of behavioral studies suggested the absence of competition between geometric cues and landmarks in some experimental paradigms. In parallel to these studies, neurobiological experiments suggested the existence of separate independent memory systems which may not always interact according to classic associative principles. In this paper we attempt to combine these two lines of research by proposing a model of spatial learning that is based on the theory of multiple memory systems. In our model, a place-based locale strategy uses activities of modeled hippocampal place cells to drive navigation to a hidden goal, while a stimulus-response taxon strategy, presumably mediated by the dorso-lateral striatum, learns landmark-approaching behavior. A strategy selection network, proposed to reside in the prefrontal cortex, implements a simple reinforcement learning rule to switch behavioral strategies. The model is used to reproduce the results of a behavioral experiment in which an interaction between a landmark and geometric cues was studied. We show that this model, built on the basis of neurobiological data, can explain the lack of competition between the landmark and geometry, potentiation of geometry learning by the landmark, and blocking. Namely, we propose that the geometry potentiation is a consequence of cooperation between memory systems during learning, while blocking is due to competition between the memory systems during action selection.
Colwell, Robert K; Gotelli, Nicholas J; Ashton, Louise A; Beck, Jan; Brehm, Gunnar; Fayle, Tom M; Fiedler, Konrad; Forister, Matthew L; Kessler, Michael; Kitching, Roger L; Klimes, Petr; Kluge, Jürgen; Longino, John T; Maunsell, Sarah C; McCain, Christy M; Moses, Jimmy; Noben, Sarah; Sam, Katerina; Sam, Legi; Shapiro, Arthur M; Wang, Xiangping; Novotny, Vojtech
2016-09-01
We introduce a novel framework for conceptualising, quantifying and unifying discordant patterns of species richness along geographical gradients. While not itself explicitly mechanistic, this approach offers a path towards understanding mechanisms. In this study, we focused on the diverse patterns of species richness on mountainsides. We conjectured that elevational range midpoints of species may be drawn towards a single midpoint attractor - a unimodal gradient of environmental favourability. The midpoint attractor interacts with geometric constraints imposed by sea level and the mountaintop to produce taxon-specific patterns of species richness. We developed a Bayesian simulation model to estimate the location and strength of the midpoint attractor from species occurrence data sampled along mountainsides. We also constructed midpoint predictor models to test whether environmental variables could directly account for the observed patterns of species range midpoints. We challenged these models with 16 elevational data sets, comprising 4500 species of insects, vertebrates and plants. The midpoint predictor models generally failed to predict the pattern of species midpoints. In contrast, the midpoint attractor model closely reproduced empirical spatial patterns of species richness and range midpoints. Gradients of environmental favourability, subject to geometric constraints, may parsimoniously account for elevational and other patterns of species richness.
Wang, Yi; Ni, Dong; Qin, Jing; Xu, Ming; Xie, Xiaoyan; Heng, Pheng-Ann
2016-01-01
Image-guided prostate interventions often require the registration of preoperative magnetic resonance (MR) images to real-time transrectal ultrasound (TRUS) images to provide high-quality guidance. One of the main challenges for registering MR images to TRUS images is how to estimate the TRUS-probe-induced prostate deformation that occurs during TRUS imaging. The combined statistical and biomechanical modeling approach shows promise for the adequate estimation of prostate deformation. However, the right setting of the biomechanical parameters is very crucial for realistic deformation modeling. We propose a patient-specific deformation model equipped with personalized biomechanical parameters obtained from shear wave elastography to reliably predict the prostate deformation during image-guided interventions. Using data acquired from a prostate phantom and twelve patients with suspected prostate cancer, we compared the prostate deformation model with and without patient-specific biomechanical parameters in terms of deformation estimation accuracy. The results show that the patient-specific deformation model possesses favorable model ability, and outperforms the model without patient-specific biomechanical parameters. The employment of the patient-specific biomechanical parameters obtained from elastography for deformation modeling shows promise for providing more precise deformation estimation in applications that use computer-assisted image-guided intervention systems. PMID:27272239
NASA Astrophysics Data System (ADS)
Wang, Yi; Ni, Dong; Qin, Jing; Xu, Ming; Xie, Xiaoyan; Heng, Pheng-Ann
2016-06-01
Image-guided prostate interventions often require the registration of preoperative magnetic resonance (MR) images to real-time transrectal ultrasound (TRUS) images to provide high-quality guidance. One of the main challenges for registering MR images to TRUS images is how to estimate the TRUS-probe-induced prostate deformation that occurs during TRUS imaging. The combined statistical and biomechanical modeling approach shows promise for the adequate estimation of prostate deformation. However, the right setting of the biomechanical parameters is very crucial for realistic deformation modeling. We propose a patient-specific deformation model equipped with personalized biomechanical parameters obtained from shear wave elastography to reliably predict the prostate deformation during image-guided interventions. Using data acquired from a prostate phantom and twelve patients with suspected prostate cancer, we compared the prostate deformation model with and without patient-specific biomechanical parameters in terms of deformation estimation accuracy. The results show that the patient-specific deformation model possesses favorable model ability, and outperforms the model without patient-specific biomechanical parameters. The employment of the patient-specific biomechanical parameters obtained from elastography for deformation modeling shows promise for providing more precise deformation estimation in applications that use computer-assisted image-guided intervention systems.
NASA Technical Reports Server (NTRS)
Schairer, Edward T.; Kushner, Laura K.; Garbeff, Theodore J.; Heineck, James T.
2015-01-01
The deformations of two sonic-boom models were measured by stereo photogrammetry during tests in the 9- by 7-Ft Supersonic Wind Tunnel at NASA Ames Research Center. The models were geometrically similar but one was 2.75 times as large as the other. Deformation measurements were made by simultaneously imaging the upper surfaces of the models from two directions by calibrated cameras that were mounted behind windows of the test section. Bending and twist were measured at discrete points using conventional circular targets that had been marked along the leading and trailing edges of the wings and tails. In addition, continuous distributions of bending and twist were measured from ink speckles that had been applied to the upper surfaces of the model. Measurements were made at wind-on (M = 1.6) and wind-off conditions over a range of angles of attack between 2.5 deg. and 5.0 deg. At each condition, model deformation was determined by comparing the wind-off and wind-on coordinates of each measurement point after transforming the coordinates to reference coordinates tied to the model. The necessary transformations were determined by measuring the positions of a set of targets on the rigid center-body of the models whose model-axes coordinates were known. Smoothly varying bending and twist measurements were obtained at all conditions. Bending displacements increased in proportion to the square of the distance to the centerline. Maximum deflection of the wingtip of the larger model was about 5 mm (2% of the semispan) and that of the smaller model was 0.9 mm (1% of the semispan). The change in wing twist due to bending increased in direct proportion to distance from the centerline and reached a (absolute) maximum of about -1? at the highest angle of attack for both models. The measurements easily resolved bending displacements as small as 0.05 mm and bending-induced changes in twist as small as 0.05 deg.
Kulasinski, Karol; Guyer, Robert; Derome, Dominique; Carmeliet, Jan
2015-08-01
Molecular simulation of adsorption of water molecules in nanoporous amorphous biopolymers, e.g., cellulose, reveals nonlinear swelling and nonlinear mechanical response with the increase in fluid content. These nonlinearities result from hydrogen bond breakage by water molecules. Classical poroelastic models, employing porosity and pore pressure as basic variables for describing the "pore fluid," are not adequate for the description of these systems. There is neither a static geometric structure to which porosity can sensibly be assigned nor arrangements of water molecules that are adequately described by giving them a pressure. We employ molar concentration of water and chemical potential to describe the state of the "pore fluid" and stress-strain as mechanical variables. A thermodynamic description is developed using a model energy function having mechanical, fluid, and fluid-mechanical coupling contributions. The parameters in this model energy are fixed by the output of the initial simulation and validated with the results of further simulation. The poroelastic properties, e.g., swelling and mechanical response, are found to be functions both of the molar concentration of water and the stress. The basic fluid-mechanical coupling coefficient, the swelling coefficient, depends on the molar concentration of water and stress and is interpreted in terms of porosity change and solid matrix deformation. The difference between drained and undrained bulk stiffness is explained as is the dependence of these moduli on concentration and stress.
NASA Astrophysics Data System (ADS)
Kulasinski, Karol; Guyer, Robert; Derome, Dominique; Carmeliet, Jan
2015-08-01
Molecular simulation of adsorption of water molecules in nanoporous amorphous biopolymers, e.g., cellulose, reveals nonlinear swelling and nonlinear mechanical response with the increase in fluid content. These nonlinearities result from hydrogen bond breakage by water molecules. Classical poroelastic models, employing porosity and pore pressure as basic variables for describing the "pore fluid," are not adequate for the description of these systems. There is neither a static geometric structure to which porosity can sensibly be assigned nor arrangements of water molecules that are adequately described by giving them a pressure. We employ molar concentration of water and chemical potential to describe the state of the "pore fluid" and stress-strain as mechanical variables. A thermodynamic description is developed using a model energy function having mechanical, fluid, and fluid-mechanical coupling contributions. The parameters in this model energy are fixed by the output of the initial simulation and validated with the results of further simulation. The poroelastic properties, e.g., swelling and mechanical response, are found to be functions both of the molar concentration of water and the stress. The basic fluid-mechanical coupling coefficient, the swelling coefficient, depends on the molar concentration of water and stress and is interpreted in terms of porosity change and solid matrix deformation. The difference between drained and undrained bulk stiffness is explained as is the dependence of these moduli on concentration and stress.
Improving the finite element forward model of the human head by warping using elastic deformation.
Tizzard, A; Bayford, R H
2007-07-01
As the use of realistic geometry in the forward model of electrical impedance tomography (EIT) of brain function appears to improve image reconstruction, the generation of patient-specific finite element meshes has been the subject of much recent work. This paper presents a more rapid method of generating more geometrically accurate finite element meshes of the human head by warping existing meshes such that the surface boundary beneath the electrodes closely matches that of the subject with minimal degradation to the quality of the mesh. Pre-existing meshes of spheres and adult head models incorporating key internal anatomical features are warped, using elastic deformation, to match a phantom latex tank incorporating a real skull. The algorithm is described and tests are carried out to optimize the key parameters to ensure minimal degradation of mesh quality and distortion of internal features. Results show that the algorithm operating with the optimum parameters produces meshes of sound quality and could represent an important step in the timely and productive creation of forward models in clinical applications.
A point cloud modeling method based on geometric constraints mixing the robust least squares method
NASA Astrophysics Data System (ADS)
Yue, JIanping; Pan, Yi; Yue, Shun; Liu, Dapeng; Liu, Bin; Huang, Nan
2016-10-01
The appearance of 3D laser scanning technology has provided a new method for the acquisition of spatial 3D information. It has been widely used in the field of Surveying and Mapping Engineering with the characteristics of automatic and high precision. 3D laser scanning data processing process mainly includes the external laser data acquisition, the internal industry laser data splicing, the late 3D modeling and data integration system. For the point cloud modeling, domestic and foreign researchers have done a lot of research. Surface reconstruction technology mainly include the point shape, the triangle model, the triangle Bezier surface model, the rectangular surface model and so on, and the neural network and the Alfa shape are also used in the curved surface reconstruction. But in these methods, it is often focused on single surface fitting, automatic or manual block fitting, which ignores the model's integrity. It leads to a serious problems in the model after stitching, that is, the surfaces fitting separately is often not satisfied with the well-known geometric constraints, such as parallel, vertical, a fixed angle, or a fixed distance. However, the research on the special modeling theory such as the dimension constraint and the position constraint is not used widely. One of the traditional modeling methods adding geometric constraints is a method combing the penalty function method and the Levenberg-Marquardt algorithm (L-M algorithm), whose stability is pretty good. But in the research process, it is found that the method is greatly influenced by the initial value. In this paper, we propose an improved method of point cloud model taking into account the geometric constraint. We first apply robust least-squares to enhance the initial value's accuracy, and then use penalty function method to transform constrained optimization problems into unconstrained optimization problems, and finally solve the problems using the L-M algorithm. The experimental results
Segmentation of Pathological Structures by Landmark-Assisted Deformable Models.
Ibragimov, Bulat; Korez, Robert; Likar, Bostjan; Pernus, Franjo; Xing, Lei; Vrtovec, Tomaz
2017-02-13
Computerized segmentation of pathological structures in medical images is challenging, as, in addition to unclear image boundaries, image artifacts and traces of surgical activities, the shape of pathological structures may be very different from the shape of normal structures. Even if a sufficient number of pathological training samples are collected, statistical shape modeling cannot always capture shape features of pathological samples as they may be suppressed by shape features of a considerably larger number of healthy samples. At the same time, landmarking can be efficient in analyzing pathological structures but often lacks robustness. In this paper, we combine the advantages of landmark detection and deformable models into a novel supervised multi-energy segmentation framework that can efficiently segment structures with pathological shape. The framework adopts the theory of Laplacian shape editing that was introduced in the field of computer graphics, so that the limitations of statistical shape modeling are avoided. The performance of the proposed framework was validated by segmenting fractured lumbar vertebrae from three-dimensional (3D) computed tomography (CT) images, atrophic corpora callosa from two-dimensional (2D) magnetic resonance (MR) crosssections and cancerous prostates from 3D MR images, resulting respectively in a Dice coefficient of 84.7 ± 5.0%, 85.3 ± 4.8% and 78.3 ± 5.1%, and boundary distance of 1.14 ± 0.49 mm, 1.42 ± 0.45mm and 2.27 ± 0.52 mm. The obtained results were shown to be superior in comparison to existing deformable modelbased segmentation algorithms.
Morphing of geometric composites via residual swelling.
Pezzulla, Matteo; Shillig, Steven A; Nardinocchi, Paola; Holmes, Douglas P
2015-08-07
Understanding and controlling the shape of thin, soft objects has been the focus of significant research efforts among physicists, biologists, and engineers in the last decade. These studies aim to utilize advanced materials in novel, adaptive ways such as fabricating smart actuators or mimicking living tissues. Here, we present the controlled growth-like morphing of 2D sheets into 3D shapes by preparing geometric composite structures that deform by residual swelling. The morphing of these geometric composites is dictated by both swelling and geometry, with diffusion controlling the swelling-induced actuation, and geometric confinement dictating the structure's deformed shape. Building on a simple mechanical analog, we present an analytical model that quantitatively describes how the Gaussian and mean curvatures of a thin disk are affected by the interplay among geometry, mechanics, and swelling. This model is in excellent agreement with our experiments and numerics. We show that the dynamics of residual swelling is dictated by a competition between two characteristic diffusive length scales governed by geometry. Our results provide the first 2D analog of Timoshenko's classical formula for the thermal bending of bimetallic beams - our generalization explains how the Gaussian curvature of a 2D geometric composite is affected by geometry and elasticity. The understanding conferred by these results suggests that the controlled shaping of geometric composites may provide a simple complement to traditional manufacturing techniques.
3D Face Modeling Using the Multi-Deformable Method
Hwang, Jinkyu; Yu, Sunjin; Kim, Joongrock; Lee, Sangyoun
2012-01-01
In this paper, we focus on the problem of the accuracy performance of 3D face modeling techniques using corresponding features in multiple views, which is quite sensitive to feature extraction errors. To solve the problem, we adopt a statistical model-based 3D face modeling approach in a mirror system consisting of two mirrors and a camera. The overall procedure of our 3D facial modeling method has two primary steps: 3D facial shape estimation using a multiple 3D face deformable model and texture mapping using seamless cloning that is a type of gradient-domain blending. To evaluate our method's performance, we generate 3D faces of 30 individuals and then carry out two tests: accuracy test and robustness test. Our method shows not only highly accurate 3D face shape results when compared with the ground truth, but also robustness to feature extraction errors. Moreover, 3D face rendering results intuitively show that our method is more robust to feature extraction errors than other 3D face modeling methods. An additional contribution of our method is that a wide range of face textures can be acquired by the mirror system. By using this texture map, we generate realistic 3D face for individuals at the end of the paper. PMID:23201976
3D Face modeling using the multi-deformable method.
Hwang, Jinkyu; Yu, Sunjin; Kim, Joongrock; Lee, Sangyoun
2012-09-25
In this paper, we focus on the problem of the accuracy performance of 3D face modeling techniques using corresponding features in multiple views, which is quite sensitive to feature extraction errors. To solve the problem, we adopt a statistical model-based 3D face modeling approach in a mirror system consisting of two mirrors and a camera. The overall procedure of our 3D facial modeling method has two primary steps: 3D facial shape estimation using a multiple 3D face deformable model and texture mapping using seamless cloning that is a type of gradient-domain blending. To evaluate our method's performance, we generate 3D faces of 30 individuals and then carry out two tests: accuracy test and robustness test. Our method shows not only highly accurate 3D face shape results when compared with the ground truth, but also robustness to feature extraction errors. Moreover, 3D face rendering results intuitively show that our method is more robust to feature extraction errors than other 3D face modeling methods. An additional contribution of our method is that a wide range of face textures can be acquired by the mirror system. By using this texture map, we generate realistic 3D face for individuals at the end of the paper.
Unified constitutive model for single crystal deformation behavior with applications
NASA Technical Reports Server (NTRS)
Walker, K. P.; Meyer, T. G.; Jordan, E. H.
1988-01-01
Single crystal materials are being used in gas turbine airfoils and are candidates for other hot section components because of their increased temperature capabilities and resistance to thermal fatigue. Development of a constitutive model which assesses the inelastic behavior of these materials has been studied in 2 NASA programs: Life Prediction and Constitutive Models for Engine Hot Section Anisotropic Materials and Biaxial Constitutive Equation Development for Single Crystals. The model has been fit to a large body of constitutive data for single crystal PWA 1480 material. The model uses a unified approach for computing total inelastic strains (creep plus plasticity) on crystallographic slip systems reproducing observed directional and strain rate effects as a natural consequence of the summed slip system quantities. The model includes several of the effects that have been reported to influence deformation in single crystal materials, such as shear stress, latent hardening, and cross slip. The model is operational in a commercial Finite Element code and is being installed in a Boundary Element Method code.
A solution to the surface intersection problem. [Boolean functions in geometric modeling
NASA Technical Reports Server (NTRS)
Timer, H. G.
1977-01-01
An application-independent geometric model within a data base framework should support the use of Boolean operators which allow the user to construct a complex model by appropriately combining a series of simple models. The use of these operators leads to the concept of implicitly and explicitly defined surfaces. With an explicitly defined model, the surface area may be computed by simply summing the surface areas of the bounding surfaces. For an implicitly defined model, the surface area computation must deal with active and inactive regions. Because the surface intersection problem involves four unknowns and its solution is a space curve, the parametric coordinates of each surface must be determined as a function of the arc length. Various subproblems involved in the general intersection problem are discussed, and the mathematical basis for their solution is presented along with a program written in FORTRAN IV for implementation on the IBM 370 TSO system.
NASA Technical Reports Server (NTRS)
Strahler, Alan H.; Li, Xiao-Wen; Jupp, David L. B.
1991-01-01
The bidirectional radiance or reflectance of a forest or woodland can be modeled using principles of geometric optics and Boolean models for random sets in a three dimensional space. This model may be defined at two levels, the scene includes four components; sunlight and shadowed canopy, and sunlit and shadowed background. The reflectance of the scene is modeled as the sum of the reflectances of the individual components as weighted by their areal proportions in the field of view. At the leaf level, the canopy envelope is an assemblage of leaves, and thus the reflectance is a function of the areal proportions of sunlit and shadowed leaf, and sunlit and shadowed background. Because the proportions of scene components are dependent upon the directions of irradiance and exitance, the model accounts for the hotspot that is well known in leaf and tree canopies.
NASA Technical Reports Server (NTRS)
Strahler, Alan H.; Li, Xiao-Wen; Jupp, David L. B.
1991-01-01
The bidirectional radiance or reflectance of a forest or woodland can be modeled using principles of geometric optics and Boolean models for random sets in a three dimensional space. This model may be defined at two levels, the scene includes four components; sunlight and shadowed canopy, and sunlit and shadowed background. The reflectance of the scene is modeled as the sum of the reflectances of the individual components as weighted by their areal proportions in the field of view. At the leaf level, the canopy envelope is an assemblage of leaves, and thus the reflectance is a function of the areal proportions of sunlit and shadowed leaf, and sunlit and shadowed background. Because the proportions of scene components are dependent upon the directions of irradiance and exitance, the model accounts for the hotspot that is well known in leaf and tree canopies.
Physics-based deformable organisms for medical image analysis
NASA Astrophysics Data System (ADS)
Hamarneh, Ghassan; McIntosh, Chris
2005-04-01
Previously, "Deformable organisms" were introduced as a novel paradigm for medical image analysis that uses artificial life modelling concepts. Deformable organisms were designed to complement the classical bottom-up deformable models methodologies (geometrical and physical layers), with top-down intelligent deformation control mechanisms (behavioral and cognitive layers). However, a true physical layer was absent and in order to complete medical image segmentation tasks, deformable organisms relied on pure geometry-based shape deformations guided by sensory data, prior structural knowledge, and expert-generated schedules of behaviors. In this paper we introduce the use of physics-based shape deformations within the deformable organisms framework yielding additional robustness by allowing intuitive real-time user guidance and interaction when necessary. We present the results of applying our physics-based deformable organisms, with an underlying dynamic spring-mass mesh model, to segmenting and labelling the corpus callosum in 2D midsagittal magnetic resonance images.
NASA Astrophysics Data System (ADS)
Kis, M.; Detzky, G.; Koppán, A.
2012-04-01
phenomenon in general. Authors calculated the deformations of a simple-geometry 3D cavity, which is caused by variable gravity loads. Dependence of the cavity effect on changing of distinct elastic properties in categorized models has been investigated. Authors introduced qualifying parameter fields calculated using the results of the FE modelling (nodal displacements as a model answer for the gravity load), in order to characterize the effect. Modelling results can be used as an estimation not only for the absolute cavity effect rate of the intended arrangement, furthermore the sensitivity of the given system against a particular geometric property. As an application example finite element modelling were carried out in order to estimate the influence of the complicated cavity system surrounding the "Budapest-Matyashegy" Gravity and Geodynamical Observatory of the Eotvos Lorand Geophysical Institute of Hungary.
BoneCreo: a novel approach for generating a geometric model of the bone structure.
Wrona, Artur
2015-01-01
Bones, the fundamental part of the skeleton, are constantly subjected to many biological processes including growth, feeding and remodelling. Remodelling causes changes in bone structure that may be difficult to notice on a day-to-day basis but become significant over the longer time span. It acts on the cancellous and cortical bone tissue, causing alterations in thickness and spatial arrangement in the first and alternations in pore size in the second. In healthy individuals such changes are a part of the natural bone remodelling process explained by Wolff's law. However, the direction of such changes is difficult to predict in patients in various pathological states in which bone health is affected. Here, we present a method to generate a computer based geometric model of the bone structure based on the cancellous tissue structure images. As a result we obtained a geometric model of the structure corresponding to the physical model of the cancellous bone. Such a model can be used in computer simulation to predict the remodelling changes in the healthy and pathological bone structures.
A Geometric Model for Specularity Prediction on Planar Surfaces with Multiple Light Sources.
Morgand, Alexandre; Tamaazousti, Mohamed; Bartoli, Adrien
2017-03-02
Specularities are often problematic in computer vision since they impact the dynamic range of the image intensity. A natural approach would be to predict and discard them using computer graphics models. However, these models depend on parameters which are difficult to estimate (light sources, objects' material properties and camera). We present a geometric model called JOLIMAS: JOint LIght-MAterial Specularity, which predicts the shape of specularities. JOLIMAS is reconstructed from images of specularities observed on a planar surface. It implicitly includes light and material properties, which are intrinsic to specularities. This model was motivated by the observation that specularities have a conic shape on planar surfaces. The conic shape is obtained by projecting a fixed quadric on the planar surface. JOLIMAS thus predicts the specularity using a simple geometric approach with static parameters (object material and light source shape). It is adapted to indoor light sources such as light bulbs and fluorescent lamps. The prediction has been tested on synthetic and real sequences. It works in a multi-light context by reconstructing a quadric for each light source with special cases such as lights being switched on or off. We also used specularity prediction for dynamic retexturing and obtained convincing rendering results. Further results are presented as supplementary video material.
NASA Astrophysics Data System (ADS)
Khomchenko, V. G.; Varepo, L. G.; Glukhov, V. I.; Krivokhatko, E. A.
2017-06-01
The geometric model for the synthesis of third-class lever mechanisms is proposed, which allows, by changing the length of the auxiliary link and the position of its fixed hinge, to rearrange the movement of the working organ onto the cyclograms with different predetermined dwell times. It is noted that with the help of the proposed model, at the expense of the corresponding geometric constructions, the best uniform Chebyshev approximation can be achieved at the interval of the standstill.
Geometric Context and Orientation Map Combination for Indoor Corridor Modeling Using a Single Image
NASA Astrophysics Data System (ADS)
Baligh Jahromi, Ali; Sohn, Gunho
2016-06-01
Since people spend most of their time indoors, their indoor activities and related issues in health, security and energy consumption have to be understood. Hence, gathering and representing spatial information of indoor spaces in form of 3D models become very important. Considering the available data gathering techniques with respect to the sensors cost and data processing time, single images proved to be one of the reliable sources. Many of the current single image based indoor space modeling methods are defining the scene as a single box primitive. This domain-specific knowledge is usually not applicable in various cases where multiple corridors are joined at one scene. Here, we addressed this issue by hypothesizing-verifying multiple box primitives which represents the indoor corridor layout. Middle-level perceptual organization is the foundation of the proposed method, which relies on finding corridor layout boundaries using both detected line segments and virtual rays created by orthogonal vanishing points. Due to the presence of objects, shadows and occlusions, a comprehensive interpretation of the edge relations is often concealed. This necessitates the utilization of virtual rays to create a physically valid layout hypothesis. Many of the former methods used Orientation Map or Geometric Context to evaluate their proposed layout hypotheses. Orientation map is a map that reveals the local belief of region orientations computed from line segments, and in a segmented image geometric context uses color, texture, edge, and vanishing point cues to estimate the likelihood of each possible label for all super-pixels. Here, the created layout hypotheses are evaluated by an objective function which considers the fusion of orientation map and geometric context with respect to the horizontal viewing angle at each image pixel. Finally, the best indoor corridor layout hypothesis which gets the highest score from the scoring function will be selected and converted to a 3D
Geometrical order-of-magnitude estimates for spatial curvature in realistic models of the Universe
NASA Astrophysics Data System (ADS)
Buchert, Thomas; Ellis, George F. R.; van Elst, Henk
2009-09-01
The thoughts expressed in this article are based on remarks made by Jürgen Ehlers at the Albert-Einstein-Institut, Golm, Germany in July 2007. The main objective of this article is to demonstrate, in terms of plausible order-of-magnitude estimates for geometrical scalars, the relevance of spatial curvature in realistic models of the Universe that describe the dynamics of structure formation since the epoch of matter-radiation decoupling. We introduce these estimates with a commentary on the use of a quasi-Newtonian metric form in this context.
NASA Astrophysics Data System (ADS)
Montag, J. Lee; Family, Fereydoon; Vicsek, Tamas; Nakanishi, Hisao
1985-10-01
We propose a new phenomenological rule for the weight function in the position-space renormalization-group approach for the calculation of the fractal dimension in models of geometrical disorder in order to avoid strong corrections to scaling due to surface effects. In our scheme the radius of gyration is used as a characteristic measure of the spatial extent of the clusters. In addition, an optimization parameter is introduced. Application to diffusion-limited aggregation in two dimensions shows that our method gives good estimates even when relatively small cells are used.
Chi, Y; Liang, J; Yan, D
2006-02-01
Model-based deformable organ registration techniques using the finite element method (FEM) have recently been investigated intensively and applied to image-guided adaptive radiotherapy (IGART). These techniques assume that human organs are linearly elastic material, and their mechanical properties are predetermined. Unfortunately, the accurate measurement of the tissue material properties is challenging and the properties usually vary between patients. A common issue is therefore the achievable accuracy of the calculation due to the limited access to tissue elastic material constants. In this study, we performed a systematic investigation on this subject based on tissue biomechanics and computer simulations to establish the relationships between achievable registration accuracy and tissue mechanical and organ geometrical properties. Primarily we focused on image registration for three organs: rectal wall, bladder wall, and prostate. The tissue anisotropy due to orientation preference in tissue fiber alignment is captured by using an orthotropic or a transversely isotropic elastic model. First we developed biomechanical models for the rectal wall, bladder wall, and prostate using simplified geometries and investigated the effect of varying material parameters on the resulting organ deformation. Then computer models based on patient image data were constructed, and image registrations were performed. The sensitivity of registration errors was studied by perturbating the tissue material properties from their mean values while fixing the boundary conditions. The simulation results demonstrated that registration error for a subvolume increases as its distance from the boundary increases. Also, a variable associated with material stability was found to be a dominant factor in registration accuracy in the context of material uncertainty. For hollow thin organs such as rectal walls and bladder walls, the registration errors are limited. Given 30% in material uncertainty
Chi, Y.; Liang, J.; Yan, D.
2006-02-15
Model-based deformable organ registration techniques using the finite element method (FEM) have recently been investigated intensively and applied to image-guided adaptive radiotherapy (IGART). These techniques assume that human organs are linearly elastic material, and their mechanical properties are predetermined. Unfortunately, the accurate measurement of the tissue material properties is challenging and the properties usually vary between patients. A common issue is therefore the achievable accuracy of the calculation due to the limited access to tissue elastic material constants. In this study, we performed a systematic investigation on this subject based on tissue biomechanics and computer simulations to establish the relationships between achievable registration accuracy and tissue mechanical and organ geometrical properties. Primarily we focused on image registration for three organs: rectal wall, bladder wall, and prostate. The tissue anisotropy due to orientation preference in tissue fiber alignment is captured by using an orthotropic or a transversely isotropic elastic model. First we developed biomechanical models for the rectal wall, bladder wall, and prostate using simplified geometries and investigated the effect of varying material parameters on the resulting organ deformation. Then computer models based on patient image data were constructed, and image registrations were performed. The sensitivity of registration errors was studied by perturbating the tissue material properties from their mean values while fixing the boundary conditions. The simulation results demonstrated that registration error for a subvolume increases as its distance from the boundary increases. Also, a variable associated with material stability was found to be a dominant factor in registration accuracy in the context of material uncertainty. For hollow thin organs such as rectal walls and bladder walls, the registration errors are limited. Given 30% in material uncertainty
Video model deformation system for the National Transonic Facility
NASA Technical Reports Server (NTRS)
Burner, A. W.; Snow, W. L.; Goad, W. K.
1983-01-01
A photogrammetric closed circuit television system to measure model deformation at the National Transonic Facility is described. The photogrammetric approach was chosen because of its inherent rapid data recording of the entire object field. Video cameras are used to acquire data instead of film cameras due to the inaccessibility of cameras which must be housed within the cryogenic, high pressure plenum of this facility. A rudimentary theory section is followed by a description of the video-based system and control measures required to protect cameras from the hostile environment. Preliminary results obtained with the same camera placement as planned for NTF are presented and plans for facility testing with a specially designed test wing are discussed.
Video model deformation system for the National Transonic Facility
NASA Astrophysics Data System (ADS)
Burner, A. W.; Snow, W. L.; Goad, W. K.
1983-08-01
A photogrammetric closed circuit television system to measure model deformation at the National Transonic Facility is described. The photogrammetric approach was chosen because of its inherent rapid data recording of the entire object field. Video cameras are used to acquire data instead of film cameras due to the inaccessibility of cameras which must be housed within the cryogenic, high pressure plenum of this facility. A rudimentary theory section is followed by a description of the video-based system and control measures required to protect cameras from the hostile environment. Preliminary results obtained with the same camera placement as planned for NTF are presented and plans for facility testing with a specially designed test wing are discussed.
Matching Aerial Images to 3D Building Models Using Context-Based Geometric Hashing
Jung, Jaewook; Sohn, Gunho; Bang, Kiin; Wichmann, Andreas; Armenakis, Costas; Kada, Martin
2016-01-01
A city is a dynamic entity, which environment is continuously changing over time. Accordingly, its virtual city models also need to be regularly updated to support accurate model-based decisions for various applications, including urban planning, emergency response and autonomous navigation. A concept of continuous city modeling is to progressively reconstruct city models by accommodating their changes recognized in spatio-temporal domain, while preserving unchanged structures. A first critical step for continuous city modeling is to coherently register remotely sensed data taken at different epochs with existing building models. This paper presents a new model-to-image registration method using a context-based geometric hashing (CGH) method to align a single image with existing 3D building models. This model-to-image registration process consists of three steps: (1) feature extraction; (2) similarity measure; and matching, and (3) estimating exterior orientation parameters (EOPs) of a single image. For feature extraction, we propose two types of matching cues: edged corner features representing the saliency of building corner points with associated edges, and contextual relations among the edged corner features within an individual roof. A set of matched corners are found with given proximity measure through geometric hashing, and optimal matches are then finally determined by maximizing the matching cost encoding contextual similarity between matching candidates. Final matched corners are used for adjusting EOPs of the single airborne image by the least square method based on collinearity equations. The result shows that acceptable accuracy of EOPs of a single image can be achievable using the proposed registration approach as an alternative to a labor-intensive manual registration process. PMID:27338410
Matching Aerial Images to 3D Building Models Using Context-Based Geometric Hashing.
Jung, Jaewook; Sohn, Gunho; Bang, Kiin; Wichmann, Andreas; Armenakis, Costas; Kada, Martin
2016-06-22
A city is a dynamic entity, which environment is continuously changing over time. Accordingly, its virtual city models also need to be regularly updated to support accurate model-based decisions for various applications, including urban planning, emergency response and autonomous navigation. A concept of continuous city modeling is to progressively reconstruct city models by accommodating their changes recognized in spatio-temporal domain, while preserving unchanged structures. A first critical step for continuous city modeling is to coherently register remotely sensed data taken at different epochs with existing building models. This paper presents a new model-to-image registration method using a context-based geometric hashing (CGH) method to align a single image with existing 3D building models. This model-to-image registration process consists of three steps: (1) feature extraction; (2) similarity measure; and matching, and (3) estimating exterior orientation parameters (EOPs) of a single image. For feature extraction, we propose two types of matching cues: edged corner features representing the saliency of building corner points with associated edges, and contextual relations among the edged corner features within an individual roof. A set of matched corners are found with given proximity measure through geometric hashing, and optimal matches are then finally determined by maximizing the matching cost encoding contextual similarity between matching candidates. Final matched corners are used for adjusting EOPs of the single airborne image by the least square method based on collinearity equations. The result shows that acceptable accuracy of EOPs of a single image can be achievable using the proposed registration approach as an alternative to a labor-intensive manual registration process.
An atomistic geometrical model of the B-DNA configuration for DNA-radiation interaction simulations
NASA Astrophysics Data System (ADS)
Bernal, M. A.; Sikansi, D.; Cavalcante, F.; Incerti, S.; Champion, C.; Ivanchenko, V.; Francis, Z.
2013-12-01
In this paper, an atomistic geometrical model for the B-DNA configuration is explained. This model accounts for five organization levels of the DNA, up to the 30 nm chromatin fiber. However, fragments of this fiber can be used to construct the whole genome. The algorithm developed in this work is capable to determine which is the closest atom with respect to an arbitrary point in space. It can be used in any application in which a DNA geometrical model is needed, for instance, in investigations related to the effects of ionizing radiations on the human genetic material. Successful consistency checks were carried out to test the proposed model. Catalogue identifier: AEPZ_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEPZ_v1_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 1245 No. of bytes in distributed program, including test data, etc.: 6574 Distribution format: tar.gz Programming language: FORTRAN. Computer: Any. Operating system: Multi-platform. RAM: 2 Gb Classification: 3. Nature of problem: The Monte Carlo method is used to simulate the interaction of ionizing radiation with the human genetic material in order to determine DNA damage yields per unit absorbed dose. To accomplish this task, an algorithm to determine if a given energy deposition lies within a given target is needed. This target can be an atom or any other structure of the genetic material. Solution method: This is a stand-alone subroutine describing an atomic-resolution geometrical model of the B-DNA configuration. It is able to determine the closest atom to an arbitrary point in space. This model accounts for five organization levels of the human genetic material, from the nucleotide pair up to the 30 nm chromatin fiber. This subroutine carries out a series of coordinate transformations
Multimodality tumor delineation via fuzzy fusion and deformable modeling
NASA Astrophysics Data System (ADS)
Wasserman, Richard M.; Acharya, Raj S.; Sibata, Claudio H.; Shin, Kyu H.
1995-05-01
Radiation therapy is a treatment modality which seeks to deliver radiation energy to a localized site within a patient, in order to destroy a malignant tumor. The nature of radio-therapy results in dual, conflicting treatment goals: (1) the ability to deliver sufficient energy to a site so as to destroy the growth and, (2) sufficient localization of the energy to minimize the damage of surrounding, healthy tissue. One of the most important aspects of radiation dose treatment planning is the accurate localization of tumor masses. In order for a course of radiation therapy to be successful, the treatment volume must encompass the entire malignant process. Accordingly, the treatment volume must include the primary tumor of interest, as well as the direct and indirect course of the cancer's metastasis. Clinical results have demonstrated that a patient's tolerance to a given dose of radiation decreases as the volume exposed is increased. Therefore, improvements in tumor localization will provide the maximum amount of tissue sparing to the patient while encompassing the necessary target volume. An improved methodology is presented for the localization of tumors. This approach focuses on the integration of MRI and CT imaging data towards the generation of a mathematically optimal, tumor boundary. The solution to this problem is formulated within a framework integrating concepts from the fields of deformable modeling, fuzzy logic, and data fusion. Fuzzy edges derived from CT and MR are combined to form an integrated edge map, which subsequently guides the `growth' of a deformable tumor model. The fusion algorithm yields tumor contours which may be employed directly in the radiation therapy treatment planning process. Results are presented for the case of a phantom data set, with a simulated-implanted tumor, as well as for an actual patient.
NASA Astrophysics Data System (ADS)
Rahmouni, A.; Beidouri, Z.; Benamar, R.
2013-09-01
The purpose of the present paper was the development of a physically discrete model for geometrically nonlinear free transverse constrained vibrations of beams, which may replace, if sufficient degrees of freedom are used, the previously developed continuous nonlinear beam constrained vibration models. The discrete model proposed is an N-Degrees of Freedom (N-dof) system made of N masses placed at the ends of solid bars connected by torsional springs, presenting the beam flexural rigidity. The large transverse displacements of the bar ends induce a variation in their lengths giving rise to axial forces modelled by longitudinal springs. The calculations made allowed application of the semi-analytical model developed previously for nonlinear structural vibration involving three tensors, namely the mass tensor mij, the linear rigidity tensor kij and the nonlinearity tensor bijkl. By application of Hamilton's principle and spectral analysis, the nonlinear vibration problem is reduced to a nonlinear algebraic system, examined for increasing numbers of dof. The results obtained by the physically discrete model showed a good agreement and a quick convergence to the equivalent continuous beam model, for various fixed boundary conditions, for both the linear frequencies and the nonlinear backbone curves, and also for the corresponding mode shapes. The model, validated here for the simply supported and clamped ends, may be used in further works to present the flexural linear and nonlinear constrained vibrations of beams with various types of discontinuities in the mass or in the elasticity distributions. The development of an adequate discrete model including the effect of the axial strains induced by large displacement amplitudes, which is predominant in geometrically nonlinear transverse constrained vibrations of beams [1]. The investigation of the results such a discrete model may lead to in the case of nonlinear free vibrations. The development of the analogy between the
A simple geometrical model describing shapes of soap films suspended on two rings
NASA Astrophysics Data System (ADS)
Herrmann, Felix J.; Kilvington, Charles D.; Wildenberg, Rebekah L.; Camacho, Franco E.; Walecki, Wojciech J.; Walecki, Peter S.; Walecki, Eve S.
2016-09-01
We measured and analysed the stability of two types of soap films suspended on two rings using the simple conical frusta-based model, where we use common definition of conical frustum as a portion of a cone that lies between two parallel planes cutting it. Using frusta-based we reproduced very well-known results for catenoid surfaces with and without a central disk. We present for the first time a simple conical frusta based spreadsheet model of the soap surface. This very simple, elementary, geometrical model produces results surprisingly well matching the experimental data and known exact analytical solutions. The experiment and the spreadsheet model can be used as a powerful teaching tool for pre-calculus and geometry students.