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Sample records for global gyrokinetic simulations

  1. Global gyrokinetic simulations with strong flows

    NASA Astrophysics Data System (ADS)

    Collier, J. D.; McMillan, B. F.; Robinson, J. R.

    2016-11-01

    We report on the investigation of strong toroidal rotation effects in a global tokamak code, ORB5. This includes the implementation of a strong flow gyrokinetic Lagrangian, allowing a complete treatment of centrifugal and Coriolis effects in the laboratory frame. In order to consistently perform the linear analysis in this system, an axisymmetric gyrokinetic equilibrium distribution function is defined using the constants of motion: we show it corresponds to the standard choice in the local limit and is close to the neoclassical solution in the banana regime. The energy and momentum transport equations are presented in an analogous form to those for the weak flow system. Linear studies of Ion Temperature Gradient (ITG) modes in rotating plasmas are performed to determine how the global effects interact with the effects of strong rotation. We also determine the geodesic acoustic mode dispersion with respect to plasma rotation rate in this gyrokinetic model and compare it to MHD theory.

  2. Gyrokinetic Simulation of Global Turbulent Transport Properties in Tokamak Experiments

    SciTech Connect

    Wang, W.X.; Lin, Z.; Tang, W.M.; Lee, W.W.; Ethier, S.; Lewandowski, J.L.V.; Rewoldt, G.; Hahm, T.S.; Manickam, J.

    2006-01-01

    A general geometry gyro-kinetic model for particle simulation of plasma turbulence in tokamak experiments is described. It incorporates the comprehensive influence of noncircular cross section, realistic plasma profiles, plasma rotation, neoclassical (equilibrium) electric fields, and Coulomb collisions. An interesting result of global turbulence development in a shaped tokamak plasma is presented with regard to nonlinear turbulence spreading into the linearly stable region. The mutual interaction between turbulence and zonal flows in collisionless plasmas is studied with a focus on identifying possible nonlinear saturation mechanisms for zonal flows. A bursting temporal behavior with a period longer than the geodesic acoustic oscillation period is observed even in a collisionless system. Our simulation results suggest that the zonal flows can drive turbulence. However, this process is too weak to be an effective zonal flow saturation mechanism.

  3. Global gyrokinetic simulations of microturbulence for TCV-relevant plasmas

    NASA Astrophysics Data System (ADS)

    Merlo, G.; Brunner, S.; Coda, S.; Huang, Z.; Sauter, O.; Villard, L.; Görler, T.; Jenko, F.; Told, D.; Camenen, Y.; Marinoni, A.

    2015-11-01

    Due to significant global effects, in smaller-sized tokamaks such as TCV local (flux-tube) microturbulence simulations are unable to fully reproduce experimental transport levels. We will therefore present results obtained with the global version of the gyrokinetic code GENE aiming at addressing two observations made on TCV. 1) Effect of negative triangularity: it has been experimentally demonstrated that half the heating power is required to maintain the same electron temperature profile when the sign of triangularity of the Last Closed Flux Surface is reversed from δ=0.4 to -0.4 . Local simulations fail at reproducing both the actual transport level and positive/negative δ flux ratio. Therefore global simulations have been carried out with the aim of recovering the experimental results. 2) GAM physics: a complete multi-diagnostic characterization of the Geodesic Acoustic Mode has been reported from TCV. In particular the dependency of frequency, radial location and wave vector on plasma parameters have been experimentally investigated. Global runs modeling these TCV conditions will be discussed and simulations compared to experiments with the help of synthetic diagnostics.

  4. GYSELA, a full-f global gyrokinetic Semi-Lagrangian code for ITG turbulence simulations

    SciTech Connect

    Grandgirard, V.; Sarazin, Y.; Garbet, X.; Dif-Pradalier, G.; Ghendrih, Ph.; Besse, N.; Bertrand, P.

    2006-11-30

    This work addresses non-linear global gyrokinetic simulations of ion temperature gradient (ITG) driven turbulence with the GYSELA code. The particularity of GYSELA code is to use a fixed grid with a Semi-Lagrangian (SL) scheme and this for the entire distribution function. The 4D non-linear drift-kinetic version of the code already showns the interest of such a SL method which exhibits good properties of energy conservation in non-linear regime as well as an accurate description of fine spatial scales. The code has been upgrated to run 5D simulations of toroidal ITG turbulence. Linear benchmarks and non-linear first results prove that semi-lagrangian codes can be a credible alternative for gyrokinetic simulations.

  5. Comparisons between global and local gyrokinetic simulations of an ASDEX Upgrade H-mode plasma

    NASA Astrophysics Data System (ADS)

    Navarro, Alejandro Bañón; Told, Daniel; Jenko, Frank; Görler, Tobias; Happel, Tim

    2016-04-01

    We investigate by means of local and global nonlinear gyrokinetic GENE simulations an ASDEX Upgrade H-mode plasma. We find that for the outer core positions (i.e., ρ tor ≈ 0.5 - 0.7 ), nonlocal effects are important. For nominal input parameters local simulations over-predict the experimental heat fluxes by a large factor, while a good agreement is found with global simulations. This was a priori not expected, since the values of 1 / ρ ⋆ were large enough that global and local simulations should have been in accordance. Nevertheless, due to the high sensitivity of the heat fluxes with respect to the input parameters, it is still possible to match the heat fluxes in local simulations with the experimental and global results by varying the ion temperature gradient within the experimental uncertainties. In addition to that, once an agreement in the transport quantities between local (flux-matched) and global simulations is achieved, an agreement for other quantities, such as density and temperature fluctuations, is also found. The case presented here clearly shows that even in the presence of global size-effects, the local simulation approach is still a valid and accurate approach.

  6. Flux- and gradient-driven global gyrokinetic simulation of tokamak turbulence

    SciTech Connect

    Goerler, Tobias; Jenko, Frank; Marcus, Patrick; Merz, Florian; Told, Daniel; Lapillonne, Xavier; Brunner, Stephan; Aghdam, Sohrab Khosh; McMillan, Ben F.; Sauter, Olivier; Villard, Laurent; Dannert, Tilman

    2011-05-15

    The Eulerian gyrokinetic turbulence code gene has recently been extended to a full torus code. Moreover, it now provides Krook-type sources for gradient-driven simulations where the profiles are maintained on average as well as localized heat sources for a flux-driven type of operation. Careful verification studies and benchmarks are performed successfully. This setup is applied to address three related transport issues concerning nonlocal effects. First, it is confirmed that in gradient-driven simulations, the local limit can be reproduced--provided that finite aspect ratio effects in the geometry are treated carefully. In this context, it also becomes clear that the profile widths (not the device width) may constitute a more appropriate measure for finite-size effects. Second, the nature and role of heat flux avalanches are discussed in the framework of both local and global, flux- and gradient-driven simulations. Third, simulations dedicated to discharges with electron internal barriers are addressed.

  7. Flux- and gradient-driven global gyrokinetic simulation of tokamak turbulencea)

    NASA Astrophysics Data System (ADS)

    Görler, Tobias; Lapillonne, Xavier; Brunner, Stephan; Dannert, Tilman; Jenko, Frank; Aghdam, Sohrab Khosh; Marcus, Patrick; McMillan, Ben F.; Merz, Florian; Sauter, Olivier; Told, Daniel; Villard, Laurent

    2011-05-01

    The Eulerian gyrokinetic turbulence code gene has recently been extended to a full torus code. Moreover, it now provides Krook-type sources for gradient-driven simulations where the profiles are maintained on average as well as localized heat sources for a flux-driven type of operation. Careful verification studies and benchmarks are performed successfully. This setup is applied to address three related transport issues concerning nonlocal effects. First, it is confirmed that in gradient-driven simulations, the local limit can be reproduced—provided that finite aspect ratio effects in the geometry are treated carefully. In this context, it also becomes clear that the profile widths (not the device width) may constitute a more appropriate measure for finite-size effects. Second, the nature and role of heat flux avalanches are discussed in the framework of both local and global, flux- and gradient-driven simulations. Third, simulations dedicated to discharges with electron internal barriers are addressed.

  8. Understanding TCV L-mode plasmas via global gyrokinetic GENE simulations

    NASA Astrophysics Data System (ADS)

    Merlo, Gabriele; Brunner, Stephan; Coda, Stefano; Goerler, Tobias; Huang, Zhouji; Jenko, Frank; Told, Daniel; Sauter, Olivier; Villard, Laurent

    2016-10-01

    It is known that global effects can have a significant influence on turbulent transport driven by microintabilities, especially for small size machines like the TCV tokamak. The global version of the gyrokinetic GENE code has been extensively used to model TCV plasmas for which finite ρ* effects are expected to be crucial in order to recover the experimentally observed behaviour. We will address in particular: (i) The effect of negative triangularity, which has been experimentally observed to lower up to a factor of two the heat flux through the lectron channel at all radial locations. Global effects and the inclusion of carbon impurities turn out to be the key elements required in order to match experiments and simulation results. (ii) The formation of either radially coherent or dispersive axisymmetric density fluctuations, experimentally interpreted as Geodesic Acoustic Modes. GENE simulations reproduce the observed behaviour and allow to conclude that the modification of safety factor alone cannot explain the transition between these two different fluctuation regimes.

  9. Global gyrokinetic particle-in-cell simulations of internal kink instabilities

    SciTech Connect

    Mishchenko, Alexey; Zocco, Alessandro

    2012-12-15

    Internal kink instabilities have been studied in straight tokamak geometry employing an electromagnetic gyrokinetic particle-in-cell (PIC) code. The ideal-MHD internal kink mode and the collisionless m=1 tearing mode have been successfully simulated with the PIC code. Diamagnetic effects on the internal kink modes have also been investigated.

  10. Advanced methods in global gyrokinetic full f particle simulation of tokamak transport

    SciTech Connect

    Ogando, F.; Heikkinen, J. A.; Henriksson, S.; Janhunen, S. J.; Kiviniemi, T. P.; Leerink, S.

    2006-11-30

    A new full f nonlinear gyrokinetic simulation code, named ELMFIRE, has been developed for simulating transport phenomena in tokamak plasmas. The code is based on a gyrokinetic particle-in-cell algorithm, which can consider electrons and ions jointly or separately, as well as arbitrary impurities. The implicit treatment of the ion polarization drift and the use of full f methods allow for simulations of strongly perturbed plasmas including wide orbit effects, steep gradients and rapid dynamic changes. This article presents in more detail the algorithms incorporated into ELMFIRE, as well as benchmarking comparisons to both neoclassical theory and other codes.Code ELMFIRE calculates plasma dynamics by following the evolution of a number of sample particles. Because of using an stochastic algorithm its results are influenced by statistical noise. The effect of noise on relevant magnitudes is analyzed.Turbulence spectra of FT-2 plasma has been calculated with ELMFIRE, obtaining results consistent with experimental data.

  11. Accuracy of momentum and gyrodensity transport in global gyrokinetic particle-in-cell simulations

    SciTech Connect

    McMillan, B. F.; Villard, L.

    2014-05-15

    Gyrokinetic Particle-In-Cell (PIC) simulations based on conservative Lagrangian formalisms admit transport equations for conserved quantities such as gyrodensity and toroidal momentum, and these can be derived for arbitrary wavelength, even though previous applications have used the long-wavelength approximation. In control-variate PIC simulations, a consequence of the different treatment of the background (f{sub 0}) and perturbed parts (δf), when a splitting f = f{sub 0} + δf is performed, is that analytical transport relations for the relevant fluxes and moments are only reproduced in the large marker number limit. The transport equations for f can be used to write the inconsistency in the perturbed quantities explicitly in terms of the sampling of the background distribution f{sub 0}. This immediately allows estimates of the error in consistency of momentum transport in control-variate PIC simulations. This inconsistency tends to accumulate secularly and is not directly affected by the sources and noise control in the system. Although physical tokamaks often rotate quite strongly, the standard gyrokinetic formalism assumes weak perpendicular flows, comparable to the drift speed. For systems with such weak flows, maintaining acceptably small relative errors requires that a number of markers scale with the fourth power of the linear system size to consistently resolve long-wavelength evolution. To avoid this unfavourable scaling, an algorithm for exact gyrodensity transport has been developed, and this is shown to allow accurate simulations with an order of magnitude fewer markers.

  12. Proposal of a brand-new gyrokinetic algorithm for global MHD simulation

    NASA Astrophysics Data System (ADS)

    Naitou, Hiroshi; Kobayashi, Kenichi; Hashimoto, Hiroki; Andachi, Takehisa; Lee, Wei-Li; Tokuda, Shinji; Yagi, Masatoshi

    2009-11-01

    A new algorithm for the gyrokinetic PIC code is proposed. The basic equations are energy conserving and composed of (1) the gyrokinetic Vlasov (GKV) equation, (2) the Vortex equation, and (3) the generalized Ohm's law along the magnetic field. Equation (2) is used to advance electrostatic potential in time. Equation (3) is used to advance longitudinal component of vector potential in time as well as estimating longitudinal induced electric field to accelerate charged particles. The particle information is used to estimate pressure terms in equation (3). The idea was obtained in the process of reviewing the split-weight-scheme formalism. This algorithm was incorporated in the Gpic-MHD code. Preliminary results for the m=1/n=1 internal kink mode simulation in the cylindrical geometry indicate good energy conservation, quite low noise due to particle discreteness, and applicability to larger spatial scale and higher beta regimes. The advantage of new Gpic-MHD is that the lower order moments of the GKV equation are estimated by the moment equation while the particle information is used to evaluate the second order moment.

  13. Gyrokinetic simulations of ETG Turbulence*

    NASA Astrophysics Data System (ADS)

    Nevins, William

    2005-10-01

    Recent gyrokinetic simulations of electron temperature gradient (ETG) turbulence [1,2] produced different results despite similar plasma parameters. Ref.[1] differs from Ref.[2] in that [1] eliminates magnetically trapped particles ( r/R=0 ), while [2] retains magnetically trapped particles ( r/R 0.18 ). Differences between [1] and [2] have been attributed to insufficient phase-space resolution and novel physics associated with toroidicity and/or global simulations[2]. We have reproduced the results reported in [2] using a flux-tube, particle-in-cell (PIC) code, PG3EQ[3], thereby eliminating global effects as the cause of the discrepancy. We observe late-time decay of ETG turbulence and the steady-state heat transport in agreement with [2], and show this results from discrete particle noise. Discrete particle noise is a numerical artifact, so both the PG3EQ simulations reported here and those reported in Ref.[2] have little to say about steady-state ETG turbulence and the associated anomalous electron heat transport. Our attempts to benchmark PIC and continuum[4] codes at the plasma parameters used in Ref.[2] produced very large, intermittent transport. We will present an alternate benchmark point for ETG turbulence, where several codes reproduce the same transport levels. Parameter scans about this new benchmark point will be used to investigate the parameter dependence of ETG transport and to elucidate saturation mechanisms proposed in Refs.[1,2] and elsewhere[5-7].*In collaboration with A. Dimits (LLNL), J. Candy, C. Estrada-Mila (GA), W. Dorland (U of MD), F. Jenko, T. Dannert (Max-Planck Institut), and G. Hammett (PPPL). Work at LLNL performed for US DOE under Contract W7405-ENG-48.[1] F. Jenko and W. Dorland, PRL 89, 225001 (2002).[2] Z. Lin et al, 2004 Sherwood Mtg.; 2004 TTF Mtg.; Fusion Energy 2004 (IAEA, Vienna, 2005); Bull. Am. Phys. Soc. (November, 2004); 2005 TTF Mtg.; 2005 Sherwood Mtg.; Z. Lin, et al, Phys. Plasmas 12, 056125 (2005). [3] A.M. Dimits

  14. Gyrokinetic simulation of global and local Alfven eigenmodes driven by energetic particles in a DIII-D discharge

    SciTech Connect

    Bass, E. M.; Waltz, R. E.

    2013-01-15

    The unstable spectrum of Alfven eigenmodes (AEs) driven by neutral beam-sourced energetic particles (EPs) in a benchmark DIII-D discharge (142111) is calculated in a fully gyrokinetic model using the GYRO code's massively parallel linear eigenvalue solver. One cycle of the slow (equilibrium scale) frequency sweep of the reverse shear Alfven eigenmode (RSAE) at toroidal mode number n=3 is mapped. The RSAE second harmonic and an unstable beta-induced Alfven eigenmode (BAE) are simultaneously tracked alongside the primary RSAE. An observed twist in the eigenmode pattern, caused mostly by shear in the driving EP profile, is shown through artificially varying the E Multiplication-Sign B rotational velocity shear to depend generally on shear in the local wave phase velocity. Coupling to the BAE and to the toroidal Alfven eigenmode limit the RSAE frequency sweeps at the lower and upper end, respectively. While the present fully gyrokinetic model (including thermal ions and electrons) constitutes the best treatment of compressibility physics available, the BAE frequency is overpredicted by about 20% against experiment here and is found to be sensitive to energetic beam ion pressure. The RSAE frequency is more accurately matched except when it is limited by the BAE. Simulations suggest that the experiment is very close to marginal AE stability at points of RSAE-BAE coupling. A recipe for comparing the radial profile of quasilinear transport flux from local modes to that from global modes paves the way for the development of a stiff (critical gradient) local AE transport model based on local mode stability thresholds.

  15. Influence of the parallel nonlinearity on zonal flows and heat transport in global gyrokinetic particle-in-cell simulations

    NASA Astrophysics Data System (ADS)

    Jolliet, S.; McMillan, B. F.; Vernay, T.; Villard, L.; Hatzky, R.; Bottino, A.; Angelino, P.

    2009-07-01

    In this paper, the influence of the parallel nonlinearity on zonal flows and heat transport in global particle-in-cell ion-temperature-gradient simulations is studied. Although this term is in theory orders of magnitude smaller than the others, several authors [L. Villard, P. Angelino, A. Bottino et al., Plasma Phys. Contr. Fusion 46, B51 (2004); L. Villard, S. J. Allfrey, A. Bottino et al., Nucl. Fusion 44, 172 (2004); J. C. Kniep, J. N. G. Leboeuf, and V. C. Decyck, Comput. Phys. Commun. 164, 98 (2004); J. Candy, R. E. Waltz, S. E. Parker et al., Phys. Plasmas 13, 074501 (2006)] found different results on its role. The study is performed using the global gyrokinetic particle-in-cell codes TORB (theta-pinch) [R. Hatzky, T. M. Tran, A. Könies et al., Phys. Plasmas 9, 898 (2002)] and ORB5 (tokamak geometry) [S. Jolliet, A. Bottino, P. Angelino et al., Comput. Phys. Commun. 177, 409 (2007)]. In particular, it is demonstrated that the parallel nonlinearity, while important for energy conservation, affects the zonal electric field only if the simulation is noise dominated. When a proper convergence is reached, the influence of parallel nonlinearity on the zonal electric field, if any, is shown to be small for both the cases of decaying and driven turbulence.

  16. Gyrokinetic simulation of current-driven instabilities

    NASA Astrophysics Data System (ADS)

    McClenaghan, Joseph

    The gyrokinetic toroidal code(GTC) capability has been extended for simulating current-driven instabilities in magnetized plasmas such as kink and resistive tearing modes with kinetic effects. This new gyrokinetic capability enables first-principles, integrated simulations of macroscopic magnetohydrodynamic(MHD) modes, which limit the performance of burning plasmas and threaten the integrity of fusion devices. The excitation and evolution of macroscopic MHD modes often depend on the kinetic effects at microscopic scales and the nonlinear coupling of multiple physical processes. GTC simulation in the fluid limit of the internal kink modes in cylindrical geometry has been verified by benchmarking with an MHD eigenvalue code. The global simulation domain covers the magnetic axis which is necessary for simulating the macroscopic MHD modes. Gyrokinetic simulations of the internal kink modes in the toroidal geometry find that ion kinetic effects significantly reduce the growth rate even when the banana orbit width is much smaller than the radial width of the perturbed current layer at the mode rational surface. This new GTC capability for current-driven instability has now been extended to simulate fishbone instabilities excited by energetic particles and resistive tearing modes. GTC has also been applied to study the internal kink modes in astrophysical jets that are formed around supermassive black holes. Linear simulations find that the internal kink modes in astrophysical jets are unstable with a broad eigenmode. Nonlinear saturation amplitude of these kink modes is observed to be small, suggesting that the jets can remain collimated even in the presence of the internal kink modes. Generation of a mean parallel electric field by the nonlinear dynamics of internal kink modes and the potential implication of this field on particle acceleration in jets has been examined.

  17. Gyrokinetic Turbulence Simulations for Stellarators

    NASA Astrophysics Data System (ADS)

    Merz, F.; Xanthopoulos, P.; Gorler, T.; Jenko, F.; Mikkelsen, D.

    2007-11-01

    While there is an abundance of publications on plasma microturbulence in tokamaks, not much is presently known about its character in nonaxisymmetric devices. The present work constitutes the first attempt to investigate turbulent transport in modern stellarators, using the gyrokinetic turbulence code Gene and realistic magnetic equilibria. First, linear and nonlinear gyrokinetic simulations of ion-temperature-gradient (ITG) and trapped electron modes are presented for the optimized stellarator Wendelstein 7-X which is currently under construction at Greifswald, Germany. The newly developed code Tracer -- based on field line tracing -- is employed to extract the required geometric information from the MHD equilibria [Phys. Plasmas 13, 092301 (2006)]. Extensive linear studies reveal substantial differences with respect to axisymmetric geometry [Phys. Plasmas 14, 042501 (2007)]. Nonlinear ITG simulations are also presented [Phys. Rev. Lett., in print]. Several fundamental features are discussed, including the role of zonal flows for turbulence saturation, the resulting flux-gradient relationship and the co-existence of ITG modes with trapped ion modes in the saturated state. Similar studies will be presented for the stellarator experiment NCSX at PPPL with the aim to comprehend the effects of quasi-axisymmetric geometry on the properties - both linear and nonlinear - of various microinstabilities.

  18. Electromagnetic Gyrokinetic Simulations

    SciTech Connect

    Wan, W

    2003-11-19

    A new electromagnetic kinetic electron {delta} particle simulation model has been demonstrated to work well at large values of plasma {beta} times the ion-to-electron mass ratio. The simulation is three-dimensional using toroidal flux-tube geometry and includes electron-ion collisions. The model shows accurate shear Alfven wave damping and microtearing physics. Zonal flows with kinetic electrons are found to be turbulent with the spectrum peaking at zero and having a width in the frequency range of the driving turbulence. This is in contrast with adiabatic electron cases where the zonal flows are near stationary, even though the linear behavior of the zonal flow is not significantly affected by kinetic electrons. zonal fields are found to be very weak, consistent with theoretical predictions for {beta} below the kinetic ballooning limit. Detailed spectral analysis of the turbulence data is presented in the various limits.

  19. Gyrokinetic particle simulation of beta-induced Alfven eigenmode

    SciTech Connect

    Zhang, H. S.; Lin, Z.; Holod, I.; Xiao, Y.; Wang, X.; Zhang, W. L.

    2010-11-15

    The beta-induced Alfven eigenmode (BAE) in toroidal plasmas is studied using global gyrokinetic particle simulations. The BAE real frequency and damping rate measured in the initial perturbation simulation and in the antenna excitation simulation agree well with each other. The real frequency is slightly higher than the ideal magnetohydrodynamic (MHD) accumulation point frequency due to the kinetic effects of thermal ions. Simulations with energetic particle density gradient show exponential growth of BAE with a growth rate sensitive to the energetic particle temperature and density. The nonperturbative contributions by energetic particles modify the mode structure and reduce the frequency relative to the MHD theory. The finite Larmor radius effects of energetic particles reduce the BAE growth rate. Benchmarks between gyrokinetic particle simulation and hybrid MHD-gyrokinetic simulation show good agreement in BAE real frequency and mode structure.

  20. Dynamic procedure for filtered gyrokinetic simulations

    SciTech Connect

    Morel, P.; Banon Navarro, A.; Albrecht-Marc, M.; Carati, D.; Merz, F.; Goerler, T.; Jenko, F.

    2012-01-15

    Large eddy simulations (LES) of gyrokinetic plasma turbulence are investigated as interesting candidates to decrease the computational cost. A dynamic procedure is implemented in the gene code, allowing for dynamic optimization of the free parameters of the LES models (setting the amplitudes of dissipative terms). Employing such LES methods, one recovers the free energy and heat flux spectra obtained from highly resolved direct numerical simulations. Systematic comparisons are performed for different values of the temperature gradient and magnetic shear, parameters which are of prime importance in ion temperature gradient driven turbulence. Moreover, the degree of anisotropy of the problem, which can vary with parameters, can be adapted dynamically by the method that shows gyrokinetic large eddy simulation to be a serious candidate to reduce numerical cost of gyrokinetic solvers.

  1. Gyrokinetic simulation of microturbulence in EAST tokamak

    NASA Astrophysics Data System (ADS)

    Xiao, Yong; Zhang, Taige; Zhao, Chen

    2014-10-01

    A complete understanding of anomalous transport is critical for designing future magnetic fusion reactors. It is generally accepted that the micro-scale turbulence leads to anomalous transport. For low beta toroidal plasmas, the electrostatic modes may dominate and ion temperature gradient (ITG) mode and trapped electron mode (TEM) are two very important candidates accounting for ion and electron turbulent transport respectively. Recently the massively parallel gyrokinetic simulation has emerged as a major tool to investigate the nonlinear physics of the turbulent transport. The newly-developed capabilities enable the gyrokinetic code GTC to simulate the turbulent transport for real tokamak plasma shape and profiles. These capabilities include a new gyrokinetic Poisson solver and zonal flow solver suitable for general plasma shape and profiles, improvements on the conventional four-point gyroaverage and newly-developed nonuniform initial marker loading. The GTC code is now able to import experimental plasma profiles and equilibrium magnetic field that come from the EFIT or TRANSP equilibrium reconstruction. Linear and nonlinear gyrokinetic simulations are carried out with the new capabilities in GTC for the electron coherent mode (ECM) recently observed in the EAST tokamak (EAST shot # 38300). We found that in the pedestal region with strong electron temperature gradient, the unstable waves propagate in the electron diamagnetic direction, showing a trapped electron mode (TEM) feature. It is also found in the collisionless limit, the linear mode frequency is higher than that from the experiment.

  2. Global Gyrokinetic Simulations of the Dominant High-n and Intermediate-n Instabilities in the H-Mode Tokamak Edge Pedestal

    NASA Astrophysics Data System (ADS)

    Parker, Scott

    2012-10-01

    Global electromagnetic gyrokinetic simulations show the existence of near threshold conditions, for both a high-n Kinetic Ballooning Mode (KBM) and an intermediate-n kinetic version of Peeling-Ballooning Mode (PBM). The KBM and the PBM have been used to constrain the EPED model [1]. Global gyrokinetic simulations show that the H-mode pedestal, just prior to the onset of the Edge Localized Mode (ELM), is very near the KBM threshold. Two DIII-D experimental discharges are studied, one reporting KBM features in fluctuation measurements [2]. Simulations find that in addition to the high-n KBM, an intermediate-n electromagnetic mode is unstable. This kinetic version of the PBM has phase velocity in the electron diamagnetic direction, but otherwise has features similar to the MHD PBM. When the magnetic shear is reduced in a narrow region near the steep pressure gradient, the intermediate-n ``kinetic PBM'' is stabilized, while the high-n KBM becomes the most unstable mode. Global simulation results of the KBM compare favorably with flux tube simulations. The KBM transitions to an unstable electrostatic ion mode as the plasma beta is reduced. The intermediate-n ``kinetic peeling ballooning mode'' is sensitive to the q-profile and only seen in global electromagnetic simulations. Collisions increase the KBM critical beta and growth rate. These results indicate that an improved pedestal model should include, in detail, any corrections to the bootstrap current, and any other equilibrium effects that might reduce the local magnetic shear. It is known that the bootstrap current may flatten the q-profile in the steep gradient region [3]. Simulations are carried out using the global electromagnetic GEM code, including kinetic electrons, electron-ion collisions and the effects of realistic magnetic geometry. In addition to global linear analysis, nonlinear simulations will be reported showing that, while the equilibrium radial electric field has a weak effect on the linear growth

  3. Gyrokinetic simulations of turbulent transport: size scaling and chaotic behaviour

    NASA Astrophysics Data System (ADS)

    Villard, L.; Bottino, A.; Brunner, S.; Casati, A.; Chowdhury, J.; Dannert, T.; Ganesh, R.; Garbet, X.; Görler, T.; Grandgirard, V.; Hatzky, R.; Idomura, Y.; Jenko, F.; Jolliet, S.; Khosh Aghdam, S.; Lapillonne, X.; Latu, G.; McMillan, B. F.; Merz, F.; Sarazin, Y.; Tran, T. M.; Vernay, T.

    2010-12-01

    Important steps towards the understanding of turbulent transport have been made with the development of the gyrokinetic framework for describing turbulence and with the emergence of numerical codes able to solve the set of gyrokinetic equations. This paper presents some of the main recent advances in gyrokinetic theory and computing of turbulence. Solving 5D gyrokinetic equations for each species requires state-of-the-art high performance computing techniques involving massively parallel computers and parallel scalable algorithms. The various numerical schemes that have been explored until now, Lagrangian, Eulerian and semi-Lagrangian, each have their advantages and drawbacks. A past controversy regarding the finite size effect (finite ρ*) in ITG turbulence has now been resolved. It has triggered an intensive benchmarking effort and careful examination of the convergence properties of the different numerical approaches. Now, both Eulerian and Lagrangian global codes are shown to agree and to converge to the flux-tube result in the ρ* → 0 limit. It is found, however, that an appropriate treatment of geometrical terms is necessary: inconsistent approximations that are sometimes used can lead to important discrepancies. Turbulent processes are characterized by a chaotic behaviour, often accompanied by bursts and avalanches. Performing ensemble averages of statistically independent simulations, starting from different initial conditions, is presented as a way to assess the intrinsic variability of turbulent fluxes and obtain reliable estimates of the standard deviation. Further developments concerning non-adiabatic electron dynamics around mode-rational surfaces and electromagnetic effects are discussed.

  4. Benchmarking finite- β ITG gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Nevins, W. M.; Dimits, A. M.; Candy, J.; Holland, C.; Howard, N.

    2016-10-01

    We report the results of an electromagnetic gyrokinetic-simulation benchmarking study based on a well-diagnosed ion-temperature-gradient (ITG)-turbulence dominated experimental plasma. We compare the 4x3 matrix of transport/transfer quantities for each plasma species; namely the (a) particle flux, Γa, (b) momentum flux, Πa, (c) energy flux, Qa, and (d) anomalous heat exchange, Sa, with each transport coefficient broken down into: (1) electrostatic (δφ) (2) transverse electromagnetic (δA∥) , and (3) compressional electromagnetic, (δB∥) contributions. We compare realization-independent quantities (correlation functions, spectral densities, etc.), which characterize the fluctuating fields from various gyrokinetic simulation codes. Prepared for US DOE by LLNL under Contract DE-AC52-07NA27344 and by GA under Contract DE-FG03-95ER54309. This work was supported by the U.S. DOE, Office of Science, Fusion Energy Sciences.

  5. Final Technical Report: Global Field Aligned Mesh and Gyrokinetic Field Solver in a Tokamak Edge Geometry

    SciTech Connect

    Cummings, Julian C.

    2013-05-15

    This project was a collaboration between researchers at the California Institute of Technology and the University of California, Irvine to investigate the utility of a global field-aligned mesh and gyrokinetic field solver for simulations of the tokamak plasma edge region. Mesh generation software from UC Irvine was tested with specific tokamak edge magnetic geometry scenarios and the quality of the meshes and the solutions to the gyrokinetic Poisson equation were evaluated.

  6. Continuum Edge Gyrokinetic Theory and Simulations

    SciTech Connect

    Xu, X Q; Xiong, Z; Dorr, M R; Hittinger, J A; Bodi, K; Candy, J; Cohen, B I; Cohen, R H; Colella, P; Kerbel, G D; Krasheninnikov, S; Nevins, W M; Qin, H; Rognlien, T D; Snyder, P B; Umansky, M V

    2007-01-09

    The following results are presented from the development and application of TEMPEST, a fully nonlinear (full-f) five dimensional (3d2v) gyrokinetic continuum edge-plasma code. (1) As a test of the interaction of collisions and parallel streaming, TEMPEST is compared with published analytic and numerical results for endloss of particles confined by combined electrostatic and magnetic wells. Good agreement is found over a wide range of collisionality, confining potential, and mirror ratio; and the required velocity space resolution is modest. (2) In a large-aspect-ratio circular geometry, excellent agreement is found for a neoclassical equilibrium with parallel ion flow in the banana regime with zero temperature gradient and radial electric field. (3) The four-dimensional (2d2v) version of the code produces the first self-consistent simulation results of collisionless damping of geodesic acoustic modes and zonal flow (Rosenbluth-Hinton residual) with Boltzmann electrons using a full-f code. The electric field is also found to agree with the standard neoclassical expression for steep density and ion temperature gradients in the banana regime. In divertor geometry, it is found that the endloss of particles and energy induces parallel flow stronger than the core neoclassical predictions in the SOL. (5) Our 5D gyrokinetic formulation yields a set of nonlinear electrostatic gyrokinetic equations that are for both neoclassical and turbulence simulations.

  7. Gyrokinetic Simulation of TAE in Fusion plasmas

    NASA Astrophysics Data System (ADS)

    Wang, Zhixuan

    Linear gyrokinetic simulation of fusion plasmas finds a radial localization of the toroidal Alfvén eigenmodes (TAE) due to the non-perturbative energetic particles (EP) contribution. The EP-driven TAE has a radial mode width much smaller than that predicted by the magnetohydrodynamic (MHD) theory. The TAE radial position stays around the strongest EP pressure gradients when the EP profile evolves. The non-perturbative EP contribution is also the main cause for the breaking of the radial symmetry of the ballooning mode structure and for the dependence of the TAE frequency on the toroidal mode number. These phenomena are beyond the picture of the conventional MHD theory. Linear gyrokinetic simulation of the electron cyclotron heating (ECH) experiments on DIII-D successfully recover the TAE and RSAE. The EP profile, rather than the electron temperature, is found to be the key factor determining whether TAE or RSAE is the dominant mode in the system in our simulation. Investigation on the nonlinear gyrokinetic simulation model reveals a missing nonlinear term which has important contributions to the zonal magnetic fields. A new fluid-electron hybrid model is proposed to keep this nonlinear term in the lowest order fluid part. Nonlinear simulation of TAE using DIII-D parameters confirms the importance of this new term for the zonal magnetic fields. It is also found that zonal structures dominated by zonal electric fields are forced driven at about twice the linear growth rate of TAE in the linear phase. The zonal flows then limit the nonlinear saturation level by tearing the eigenmode structures apart. In the nonlinear phase of the simulation, the major frequency in the system chirps down by about 30% and stays there.

  8. Gyrokinetic simulation of global and local Alfvén eigenmodes driven by energetic particles in a DIII-D discharge

    NASA Astrophysics Data System (ADS)

    Bass, E. M.; Waltz, R. E.

    2013-01-01

    The unstable spectrum of Alfvén eigenmodes (AEs) driven by neutral beam-sourced energetic particles (EPs) in a benchmark DIII-D discharge (142111) is calculated in a fully gyrokinetic model using the GYRO code's massively parallel linear eigenvalue solver. One cycle of the slow (equilibrium scale) frequency sweep of the reverse shear Alfvén eigenmode (RSAE) at toroidal mode number n =3 is mapped. The RSAE second harmonic and an unstable beta-induced Alfvén eigenmode (BAE) are simultaneously tracked alongside the primary RSAE. An observed twist in the eigenmode pattern, caused mostly by shear in the driving EP profile, is shown through artificially varying the E ×B rotational velocity shear to depend generally on shear in the local wave phase velocity. Coupling to the BAE and to the toroidal Alfvén eigenmode limit the RSAE frequency sweeps at the lower and upper end, respectively. While the present fully gyrokinetic model (including thermal ions and electrons) constitutes the best treatment of compressibility physics available, the BAE frequency is overpredicted by about 20% against experiment here and is found to be sensitive to energetic beam ion pressure. The RSAE frequency is more accurately matched except when it is limited by the BAE. Simulations suggest that the experiment is very close to marginal AE stability at points of RSAE-BAE coupling. A recipe for comparing the radial profile of quasilinear transport flux from local modes to that from global modes paves the way for the development of a stiff (critical gradient) local AE transport model based on local mode stability thresholds.

  9. Gyrokinetic simulations of ion and impurity transport

    NASA Astrophysics Data System (ADS)

    Estrada-Mila, C.; Candy, J.; Waltz, R. E.

    2005-02-01

    A systematic study of turbulent particle and energy transport in both pure and multicomponent plasmas is presented. In this study, gyrokinetic results from the GYRO code [J. Candy and R. E. Waltz, J. Comput. Phys. 186, 545 (2003)] are supplemented with those from the GLF23 [R. E. Waltz, G. M. Staebler, W. Dorland et al., Phys. Plasmas 4, 2482 (1997)] transport model, as well as from quasilinear theory. Various results are obtained. The production of a particle pinch driven by temperature gradients (a thermal pinch) is demonstrated, and further shown to be weakened by finite electron collisionality. Helium transport and the effects of helium density gradient and concentration in a deuterium plasma are examined. Interestingly, it is found that the simple D-v (diffusion versus convective velocity) model of impurity flow is consistent with results obtained from nonlinear gyrokinetic simulations. Also studied is the transport in a 50-50 deuterium-tritium plasma, where a symmetry breaking is observed indicating the potential for fuel separation in a burning plasma. Quasilinear theory together with linear simulations shows that the symmetry breaking which enhances the tritium confinement arises largely from finite-Larmor-radius effects. To justify the numerical methods used in the paper, a variety of linear benchmarks and nonlinear grid refinement studies are detailed.

  10. Gyrokinetic simulation of internal kink modes

    SciTech Connect

    Naitou, Hiroshi; Tsuda, Kenji; Lee, W.W.; Sydora, R.D.

    1995-05-01

    Internal disruption in a tokamak has been simulated using a three-dimensional magneto-inductive gyrokinetic particle code. The code operates in both the standard gyrokinetic mode (total-f code) and the fully nonlinear characteristic mode ({delta}f code). The latter, a recent addition, is a quiet low noise algorithm. The computational model represents a straight tokamak with periodic boundary conditions in the toroidal direction. The plasma is initially uniformly distributed in a square cross section with perfectly conducting walls. The linear mode structure of an unstable m = 1 (poloidal) and n = 1 (toroidal) kinetic internal kink mode is clearly observed, especially in the {delta}f code. The width of the current layer around the x-point, where magnetic reconnection occurs, is found to be close to the collisionless electron skin depth. This is consistent with the theory in which electron inertia has a dominant role. The nonlinear behavior of the mode is found to be quite similar for both codes. Full reconnection in the Alfven time scale is observed along with the electrostatic potential structures created during the full reconnection phase. The E x B drift due to this electrostatic potential dominates the nonlinear phase of the development after the full reconnection.

  11. Predictive Gyrokinetic Transport Simulations and Application of Synthetic Diagnostics

    NASA Astrophysics Data System (ADS)

    Candy, J.

    2009-11-01

    In this work we make use of the gyrokinetic transport solver TGYRO [1] to predict kinetic plasma profiles consistent with energy and particle fluxes in the DIII-D tokamak. TGYRO uses direct nonlinear and neoclassical fluxes calculated by the GYRO and NEO codes, respectively, to solve for global, self-consistent temperature and density profiles via Newton iteration. Previous work has shown that gyrokinetic simulation results for DIII-D discharge 128913 match experimental data rather well in the plasma core, but with a discrepancy in both fluxes and fluctuation levels emerging closer to the edge (r/a > 0.8). The present work will expand on previous results by generating model predictions across the entire plasma core, rather than at isolated test radii. We show that TGYRO predicts temperature and density profiles in good agreement with experimental observations which simultaneously yield near-exact (to within experimental uncertainties) agreement with power balance calculations of the particle and energy fluxes for r/a <=0.8. Moreover, we use recently developed synthetic diagnostic algorithms [2] to show that TGYRO also predicts density and electron temperature fluctuation levels in close agreement with experimental measurements across the simulated plasma volume. 8pt [1] J. Candy, C. Holland, R.E. Waltz, M.R. Fahey, and E. Belli, ``Tokamak profile prediction using direct gyrokinetic and neoclassical simulation," Phys. Plasmas 16, 060704 (2009). [2] C. Holland, A.E. White, G.R. McKee, M.W. Shafer, J. Candy, R.E. Waltz, L. Schmitz, and G.R. Tynan, ``Implementation and application of two synthetic diagnostics for validating simulations of core tokamak turbulence," Phys. Plasmas 16, 052301 (2009).

  12. Gyrokinetic simulations of the tearing instability

    SciTech Connect

    Numata, Ryusuke; Dorland, William; Howes, Gregory G.; Loureiro, Nuno F.; Tatsuno, Tomoya

    2011-11-15

    Linear gyrokinetic simulations covering the collisional-collisionless transitional regime of the tearing instability are performed. It is shown that the growth rate scaling with collisionality agrees well with that predicted by a two-fluid theory for a low plasma beta case in which ion kinetic dynamics are negligible. Electron wave-particle interactions (Landau damping), finite Larmor radius, and other kinetic effects invalidate the fluid theory in the collisionless regime, in which a general non-polytropic equation of state for pressure (temperature) perturbations should be considered. We also vary the ratio of the background ion to electron temperatures and show that the scalings expected from existing calculations can be recovered, but only in the limit of very low beta.

  13. Nonlinear electromagnetic gyrokinetic simulations of tokamak plasmas

    NASA Astrophysics Data System (ADS)

    Jenko, F.; Dorland, W.

    2001-12-01

    One of the central physics issues currently targeted by nonlinear gyrokinetic simulations is the role of finite-β effects. The latter change the MHD equilibrium, introduce new dynamical space and time scales, alter and enlarge the zoo of electrostatic microinstabilities and saturation mechanisms, and lead to turbulent transport along fluctuating magnetic field lines. It is shown that the electromagnetic effects on primarily electrostatic microinstabilities are generally weakly or moderately stabilizing. However, the saturation of these modes and hence the determination of the transport level in the quasi-stationary turbulent state can be dominated by nonlinear electromagnetic effects and yield surprising results. Despite this, the induced transport is generally electrostatic in nature well below the ideal ballooning limit.

  14. Gyrokinetic particle simulation of beta-induced Alfvén eigenmode

    NASA Astrophysics Data System (ADS)

    Zhang, H. S.; Lin, Z.; Holod, I.; Wang, X.; Xiao, Y.; Zhang, W. L.

    2010-11-01

    The beta-induced Alfvén eigenmode (BAE) in toroidal plasmas is studied using global gyrokinetic particle simulations. The BAE real frequency and damping rate measured in the initial perturbation simulation and in the antenna excitation simulation agree well with each other. The real frequency is slightly higher than the ideal magnetohydrodynamic (MHD) accumulation point frequency due to the kinetic effects of thermal ions. Simulations with energetic particle density gradient show exponential growth of BAE with a growth rate sensitive to the energetic particle temperature and density. The nonperturbative contributions by energetic particles modify the mode structure and reduce the frequency relative to the MHD theory. The finite Larmor radius effects of energetic particles reduce the BAE growth rate. Benchmarks between gyrokinetic particle simulation and hybrid MHD-gyrokinetic simulation show good agreement in BAE real frequency and mode structure.

  15. Gyrokinetic simulations of microturbulence in DIII-D tokamak pedestal

    NASA Astrophysics Data System (ADS)

    Holod, Ihor; Fulton, Daniel; Taimourzadeh, Sam; Lin, Zhihong; Nazikian, Raffi; Spong, Donald

    2015-11-01

    The characteristics of H-mode pedestal are generally believed to be constrained by current-driven peeling-ballooning modes and pressure-driven instabilities, such as kinetic ballooning mode (KBM). In this work we use global gyrokinetic code (GTC) to identify and study the edge pressure-driven instabilities in the H-mode pedestal using realistic geometry and plasma profiles of DIII-D shot 131997. In our simulations we observe the KBM mode marginally dominant in the steep gradient region (ψN = 0 . 98), in the range of kθ ~ 1 cm-1 which corresponds to the most unstable mode number in the nonlinearly saturated state. For shorter wavelengths the trapped electron mode becomes dominant since its linear growth rate increases with the mode number, while the KBM gets saturated. In the pedestal top region (ψN = 0 . 95) the ITG dominates. Resonant magnetic perturbations (RMP) are widely applied for ELM mitigation. During RMP suppression, the increase of edge turbulence is often observed. To understand this phenomena we use gyrokinetic simulations to address the direct effect of magnetic perturbations on the microturbulence. Simulations with 3D equilibrium reconstructed by VMEC code have been compared with toroidally averaged equilibrium, using identical pressure profiles. Work supported by DOE grant DE-SC0010416 and by General Atomics subcontract.

  16. An arbitrary wavelength solver for global gyrokinetic simulations. Application to the study of fine radial structures on microturbulence due to non-adiabatic passing electron dynamics

    NASA Astrophysics Data System (ADS)

    Dominski, J.; McMillan, B. F.; Brunner, S.; Merlo, G.; Tran, T.-M.; Villard, L.

    2017-02-01

    The influence of the fine layers of the non-adiabatic passing electron response on electrostatic turbulent transport, previously studied systematically in flux tube geometry [Dominski et al., Phys. Plasmas 22, 062303 (2015)], is pursued in global geometry in conditions relevant for the TCV tokamak with a deuterium plasma (mi/me = 3672). The spectral organization of the passing electron turbulent flux and its dependence on the radial profile of the safety factor are revealed. A radially dependent toroidal spectral analysis of the turbulent fluxes led to the key result that the particle and heat diffusivities of passing-electrons are proportional to the local density of low-order mode rational surfaces. To permit this study of the short radial scales associated with the passing electron dynamics, a new field solver valid at an arbitrary wavelength is implemented in ORB5, for the gyrokinetic quasi-neutrality equation. A benchmark is conducted against the global version of the gyrokinetic code GENE, showing very good agreement.

  17. Gyrokinetic particle simulation of a field reversed configuration

    SciTech Connect

    Fulton, D. P. Lau, C. K.; Holod, I.; Lin, Z.; Dettrick, S.

    2016-01-15

    Gyrokinetic particle simulation of the field-reversed configuration (FRC) has been developed using the gyrokinetic toroidal code (GTC). The magnetohydrodynamic equilibrium is mapped from cylindrical coordinates to Boozer coordinates for the FRC core and scrape-off layer (SOL), respectively. A field-aligned mesh is constructed for solving self-consistent electric fields using a semi-spectral solver in a partial torus FRC geometry. This new simulation capability has been successfully verified and driftwave instability in the FRC has been studied using the gyrokinetic simulation for the first time. Initial GTC simulations find that in the FRC core, the ion-scale driftwave is stabilized by the large ion gyroradius. In the SOL, the driftwave is unstable on both ion and electron scales.

  18. Propagation of global shear Alfven waves in gyrokinetic tokamak plasmas

    NASA Astrophysics Data System (ADS)

    Nishimura, Y.; Lin, Z.; Holod, I.; Chen, L.; Decyk, V.; Klasky, S.; Ma, K.; Adams, M.; Ethier, S.; Hahm, T.; Lee, W.; Lewandowski, J.; Rewoldt, G.; Wang, W.

    2006-04-01

    Employing the electromagnetic gyrokinetic simulation models, Alfven wave dynamics in global tokamak geometry is studied. Based on a small parameter expansion by the square-root of the electron-ion mass ratio, the fluid-kinetic hybrid electron model solves the adiabatic response in the lowest order and solves the kinetic response in the higher orders. We verify the propagation of shear Alfven waves in the absence of drives or damping mechanisms by perturbing the magnetic field lines at t=0 in a global eigenmode structure. The Alfven wave experiences continuum damping. In the presence of energetic particles, excitations of toroidal Alfven eigenmode (TAE) is expected within the frequency gap. With the ηi gradient drive, at a critical β value, the kinetic ballooning mode (KBM) is excited below the ideal MHD limit. W.W.Lee et al., Phys. Plasmas 8, 4435 (2001). Z.Lin and L.Chen, Phys. Plasmas 8, 1447 (2001). J.A.Tataronis and W. Grossman, Z. Phys. 14, 203 (1973). C.Z.Cheng, L.Chen, and M.S.Chance, Ann.Phys. 161, 21 (1984). C.Z.Cheng, Nucl. Fusion 22, 773 (1982).

  19. ADVANCES IN COMPREHENSIVE GYROKINETIC SIMULATIONS OF TRANSPORT IN TOKAMAKS

    SciTech Connect

    WALTZ RE; CANDY J; HINTON FL; ESTRADA-MILA C; KINSEY JE

    2004-10-01

    A continuum global gyrokinetic code GYRO has been developed to comprehensively simulate core turbulent transport in actual experimental profiles and enable direct quantitative comparisons to the experimental transport flows. GYRO not only treats the now standard ion temperature gradient (ITG) mode turbulence, but also treats trapped and passing electrons with collisions and finite {beta}, equilibrium ExB shear stabilization, and all in real tokamak geometry. Most importantly the code operates at finite relative gyroradius ({rho}{sub *}) so as to treat the profile shear stabilization and nonlocal effects which can break gyroBohm scaling. The code operates in either a cyclic flux-tube limit (which allows only gyroBohm scaling) or a globally with physical profile variation. Rohm scaling of DIII-D L-mode has been simulated with power flows matching experiment within error bars on the ion temperature gradient. Mechanisms for broken gyroBohm scaling, neoclassical ion flows embedded in turbulence, turbulent dynamos and profile corrugations, plasma pinches and impurity flow, and simulations at fixed flow rather than fixed gradient are illustrated and discussed.

  20. Nonequilibrium Gyrokinetic Fluctuation Theory and Sampling Noise in Gyrokinetic Particle-in-cell Simulations

    SciTech Connect

    John A. Krommes

    2007-10-09

    The present state of the theory of fluctuations in gyrokinetic GK plasmas and especially its application to sampling noise in GK particle-in-cell PIC simulations is reviewed. Topics addressed include the Δf method, the fluctuation-dissipation theorem for both classical and GK many-body plasmas, the Klimontovich formalism, sampling noise in PIC simulations, statistical closure for partial differential equations, the theoretical foundations of spectral balance in the presence of arbitrary noise sources, and the derivation of Kadomtsev-type equations from the general formalism.

  1. Full f gyrokinetic method for particle simulation of tokamak transport

    SciTech Connect

    Heikkinen, J.A. Janhunen, S.J.; Kiviniemi, T.P.; Ogando, F.

    2008-05-10

    A gyrokinetic particle-in-cell approach with direct implicit construction of the coefficient matrix of the Poisson equation from ion polarization and electron parallel nonlinearity is described and applied in global electrostatic toroidal plasma transport simulations. The method is applicable for calculation of the evolution of particle distribution function f including as special cases strong plasma pressure profile evolution by transport and formation of neoclassical flows. This is made feasible by full f formulation and by recording the charge density changes due to the ion polarization drift and electron acceleration along the local magnetic field while particles are advanced. The code has been validated against the linear predictions of the unstable ion temperature gradient mode growth rates and frequencies. Convergence and saturation in both turbulent and neoclassical limit of the ion heat conductivity is obtained with numerical noise well suppressed by a sufficiently large number of simulation particles. A first global full f validation of the neoclassical radial electric field in the presence of turbulence for a heated collisional tokamak plasma is obtained. At high Mach number (M{sub p}{approx}1) of the poloidal flow, the radial electric field is significantly enhanced over the standard neoclassical prediction. The neoclassical radial electric field together with the related GAM oscillations is found to regulate the turbulent heat and particle diffusion levels particularly strongly in a large aspect ratio tokamak at low plasma current.

  2. ADVANCES IN COMPREHENSIVE GYROKINETIC SIMULATIONS OF TRANSPORT IN TOKAMAKS

    SciTech Connect

    WALTZ,R.E; CANDY,J; HINTON,F.L; ESTRADA-MILA,C; KINSEY,J.E

    2004-10-01

    A continuum global gyrokinetic code GYRO has been developed to comprehensively simulate core turbulent transport in actual experimental profiles and enable direct quantitative comparisons to the experimental transport flows. GYRO not only treats the now standard ion temperature gradient (ITG) mode turbulence, but also treats trapped and passing electrons with collisions and finite {beta}, equilibrium ExB shear stabilization, and all in real tokamak geometry. Most importantly the code operates at finite relative gyroradius ({rho}{sub *}) so as to treat the profile shear stabilization and nonlocal effects which can break gyroBohm scaling. The code operates in either a cyclic flux-tube limit (which allows only gyroBohm scaling) or globally with physical profile variation. Bohm scaling of DIII-D L-mode has been simulated with power flows matching experiment within error bars on the ion temperature gradient. Mechanisms for broken gyroBohm scaling, neoclassical ion flows embedded in turbulence, turbulent dynamos and profile corrugations, are illustrated.

  3. Gyrokinetic Simulation of Low-n Tearing Modes

    NASA Astrophysics Data System (ADS)

    Chen, Yang

    2015-11-01

    Direct gyrokinetic simulation of the low-n tearing mode in a tokamak plasma has been a great computational challenge, for two reasons. First, low-n tearing modes, unlike the micro-tearing modes, have very small growth rates and very fine mode structure in the tearing layer, which requires a large number of radial grid cells and fine control of numerical dissipation. Second, kinetic electron effects are needed in the tearing layer. Here, we first present linear gyrokinetic simulation of the low-n tearing mode in cylindrical geometry. Ions are gyrokinetic and electrons are either drift kinetic or fluid. New field solvers have been developed in the gyrokinetic code GEM [Chen and Parker, J. Comput. Phys. 220, 839 (2007)] to simulate low-n modes. For the fluid electron model, an eigenmode analysis with finite Larmor radius effects has been developed to study the linear resistive tearing mode. Excellent agreement between eigenmode analysis and initial value gyrokinetic simulation is obtained. The mode growth rate is shown to scale with resistivity as η 1 / 3, the same as the semi-collisional regime in previous kinetic treatments. Simulation of the collisionless and semi-collisional tearing mode with drift kinetic electrons has been carried out with GEM's direct split-weight control-variate algorithm. It is found that a full torus simulation of the m=2, n=1 tearing mode in a present day large tokamak is still difficult with kinetic electrons, but a generalized matching technique can be used to ameliorate the problem. The radial dimension is divided into an external region and the tearing region, with the external region described by a reduced model that gives the boundary condition for the tearing region. The size of the tearing region is small compared with the minor radius, but not arbitrarily small as done in the standard asymptotic matching approach. Gyrokinetic simulation verifies the collisionless tearing mode growth rate with finite electron mass, the semi

  4. Benchmarking gyrokinetic simulations in a toroidal flux-tube

    SciTech Connect

    Chen, Y.; Parker, S. E.; Wan, W.; Bravenec, R.

    2013-09-15

    A flux-tube model is implemented in the global turbulence code GEM [Y. Chen and S. E. Parker, J. Comput. Phys. 220, 839 (2007)] in order to facilitate benchmarking with Eulerian codes. The global GEM assumes the magnetic equilibrium to be completely given. The initial flux-tube implementation simply selects a radial location as the center of the flux-tube and a radial size of the flux-tube, sets all equilibrium quantities (B, ∇B, etc.) to be equal to the values at the center of the flux-tube, and retains only a linear radial profile of the safety factor needed for boundary conditions. This implementation shows disagreement with Eulerian codes in linear simulations. An alternative flux-tube model based on a complete local equilibrium solution of the Grad-Shafranov equation [J. Candy, Plasma Phys. Controlled Fusion 51, 105009 (2009)] is then implemented. This results in better agreement between Eulerian codes and the particle-in-cell (PIC) method. The PIC algorithm based on the v{sub ||}-formalism [J. Reynders, Ph.D. dissertation, Princeton University, 1992] and the gyrokinetic ion/fluid electron hybrid model with kinetic electron closure [Y. Chan and S. E. Parker, Phys. Plasmas 18, 055703 (2011)] are also implemented in the flux-tube geometry and compared with the direct method for both the ion temperature gradient driven modes and the kinetic ballooning modes.

  5. Gyrokinetic particle simulation of the beta-induced Alfven eigen mode

    NASA Astrophysics Data System (ADS)

    Zhang, Huasen; Lin, Zhihong; Holod, Ihor; Wang, Xin; Xiao, Yong; Zhang, Wenlu

    2010-11-01

    The beta-induced Alfven eigen mode (BAE) is studied using the global gyrokinetic particle code GTC. In our simulation, BAE is successfully excited by antenna and energetic particle density gradient. Through the antenna frequency scan, we can measure the BAE frequency and damping rate by numerical fitting the saturation amplitude. BAE excitation by energetic particles shows that the BAE propagates in the ion diamagnetic direction and the frequency has a little downshift, which is due to modification of the energetic particles. The frequency and growth rate in gyrokinetic simulation is a little different from drift kinetic simulation, which is expected due to the finite larmor radius effect. We also find that the BAE frequency is related to the wavelength and the plasma beta while the growth rate is sensitive to the energetic particle properties. Benchmarks between GTC and HMGC are also done through initial perturbation, antenna excitation and energetic particle excitation. The simulation results agree with each other very well.

  6. Low dimensional gyrokinetic PIC simulation by δf method

    NASA Astrophysics Data System (ADS)

    Chen, C. M.; Nishimura, Yasutaro; Cheng, C. Z.

    2015-11-01

    A step by step development of our low dimensional gyrokinetic Particle-in-Cell (PIC) simulation is reported. One dimensional PIC simulation of Langmuir wave dynamics is benchmarked. We then take temporal plasma echo as a test problem to incorporate the δf method. Electrostatic driftwave simulation in one dimensional slab geometry is resumed in the presence of finite density gradients. By carefully diagnosing contour plots of the δf values in the phase space, we discuss the saturation mechanism of the driftwave instabilities. A v∥ formulation is employed in our new electromagnetic gyrokinetic method by solving Helmholtz equation for time derivative of the vector potential. Electron and ion momentum balance equations are employed in the time derivative of the Ampere's law. This work is supported by Ministry of Science and Technology of Taiwan, MOST 103-2112-M-006-007 and MOST 104-2112-M-006-019.

  7. Simulation of neoclassical transport with the continuum gyrokinetic code COGENT

    SciTech Connect

    Dorf, M. A.; Cohen, R. H.; Dorr, M.; Rognlien, T.; Hittinger, J.; Compton, J.; Colella, P.; Martin, D.; McCorquodale, P.

    2013-01-25

    The development of the continuum gyrokinetic code COGENT for edge plasma simulations is reported. The present version of the code models a nonlinear axisymmetric 4D (R, v∥, μ) gyrokinetic equation coupled to the long-wavelength limit of the gyro-Poisson equation. Here, R is the particle gyrocenter coordinate in the poloidal plane, and v∥ and μ are the guiding center velocity parallel to the magnetic field and the magnetic moment, respectively. The COGENT code utilizes a fourth-order finite-volume (conservative) discretization combined with arbitrary mapped multiblock grid technology (nearly field-aligned on blocks) to handle the complexity of tokamak divertor geometry with high accuracy. Furthermore, topics presented are the implementation of increasingly detailed model collision operators, and the results of neoclassical transport simulations including the effects of a strong radial electric field characteristic of a tokamak pedestal under H-mode conditions.

  8. Simulation of neoclassical transport with the continuum gyrokinetic code COGENT

    DOE PAGES

    Dorf, M. A.; Cohen, R. H.; Dorr, M.; ...

    2013-01-25

    The development of the continuum gyrokinetic code COGENT for edge plasma simulations is reported. The present version of the code models a nonlinear axisymmetric 4D (R, v∥, μ) gyrokinetic equation coupled to the long-wavelength limit of the gyro-Poisson equation. Here, R is the particle gyrocenter coordinate in the poloidal plane, and v∥ and μ are the guiding center velocity parallel to the magnetic field and the magnetic moment, respectively. The COGENT code utilizes a fourth-order finite-volume (conservative) discretization combined with arbitrary mapped multiblock grid technology (nearly field-aligned on blocks) to handle the complexity of tokamak divertor geometry with high accuracy.more » Furthermore, topics presented are the implementation of increasingly detailed model collision operators, and the results of neoclassical transport simulations including the effects of a strong radial electric field characteristic of a tokamak pedestal under H-mode conditions.« less

  9. A fully nonlinear characteristic method for gyrokinetic simulation

    SciTech Connect

    Parker, S.E.; Lee, W.W.

    1992-07-01

    We present a new scheme which evolves the perturbed part of the distribution function along a set of characteristics that solves the fully nonlinear gyrokinetic equations. This nonlinear characteristic method for particle simulation is an extension of the partially linear weighting scheme, and may be considered an improvement of existing {delta} f methods. Some of the features of this new method are: the ability to keep all of the nonlinearities, particularly those associated with parallel acceleration; the loading of the physical equilibrium distribution function f{sub o} (e.g., a Maxwellian), with or without the multiple spatial scale approximation; the use of a single of trajectories for the particles; and also, the retention of the conservation properties of the original gyrokinetic system in the numerically converged limit. Therefore, one can take advantage of the low noise property of the weighting scheme together with the quiet start techniques to simulate weak instabilities, with a substantially reduced number of particles than required for a conventional simulation. The new method is used to study a one dimensional drift wave model which isolates the parallel velocity nonlinearity. A mode coupling calculation of the saturation mechanism is given, which is in good agreement with the simulation results and predicts a considerably lower saturation level then the estimate of Sagdeev and Galeev. Finally, we extend the nonlinear characteristic method to the electromagnetic gyrokinetic equations in general geometry.

  10. Multi-code benchmark of global gyrokinetic electromagnetic instabilities

    NASA Astrophysics Data System (ADS)

    Goerler, Tobias; Bottino, Alberto; Hornsby, William A.; Kleiber, Ralf; Tronko, Natalia; Grandgirard, Virginie; Norscini, Claudia; Sonnendruecker, Eric

    2015-11-01

    Considering the recent major extensions of global gyrokinetic codes towards a comprehensive and self-consistent treatment of electromagnetic (EM) effects, corresponding verification tests are obvious and necessary steps to be taken. While a number of (semi-)analytic test cases and benchmarks exist in the axisymmetric limit, microinstabilities and particularly EM turbulence are rarely addressed. In order to remedy this problem, a hierarchical linear gyrokinetic benchmark study is presented starting with electrostatic ion temperature gradient microinstabilities with adiabatic electron response and progressing finally to the characterization of fully EM instabilities as a function of β. The inter-code comparison involves contributions from Eulerian Vlasov, Lagrangian PIC, and Semi-Lagrange codes at least in one level of this verification exercise, thus confirming a high degree of reliability for the implementations that has rarely been achieved before in this context. Additionally, possible extensions of this benchmark into the physically more relevant nonlinear turbulence regime will be discussed, e.g., relaxation problems or gradient-driven setups. This work has been carried out within the framework of the EUROfusion Consortium.

  11. Global gyrokinetic models for energetic particle driven Alfvén instabilities in 3D equilibria

    NASA Astrophysics Data System (ADS)

    Spong, Don; Holod, Ihor

    2015-11-01

    The GTC global gyrokinetic PIC model has been adapted to 3D VMEC equilibria and provides a new method for the analysis of Alfvénic instabilities in stellarators, 3D tokamaks, and helical RFP states. The gyrokinetic orderings (k||/k⊥ << 1, ω/Ωci << 1, ρEP/L << 1) are applicable to a range of energetic particle driven instabilities that have been observed in 3D configurations. Applications of this model to stellarators have indicated that a variety of different Alfvén instabilities can be excited, depending on the toroidal mode number, fast ion average energy and fast ion density profile. Both an LHD discharge where bursting n = 1 Alfvén activity in the TAE gap was observed and a W7-X case have been examined. TAE,/EAE/GAE modes have been found in the simulations, depending on the mode family and fast ion profiles used. The dynamical evolution of the instabilities shows the field period coupling between n and n + Nfp expected for a stellarator. The development of gyrofluid reduced models that can capture relevant physics aspects of the gyrokinetic models will also be discussed. Research sponsored by the U.S. Department of Energy under Contract DE-AC05-00OR22725 with UT-Battelle, LLC and the GSEP SciDAC Center.

  12. Plasma Simulation Using Gyrokinetic-Gyrofluid Hybrid Models

    SciTech Connect

    Scott Parker

    2009-04-09

    We are developing kinetic ion models for the simulation of extended MHD phenomena. The model they have developed uses full Lorentz force ions, and either drift-kinetic or gyro-kinetic electrons. Quasi-neutrality is assumed and the displacement current is neglected. They are also studying alpha particle driven Toroidal Alfven Eigenmodes (TAE) in the GEM gyrokinetic code [Chen 07]. The basic kinetic ion MHD model was recently reported in an invited talk given by Dan Barnes at the 2007 American Physical Society - Division of Plasma Physics (APS-DPP) and it has been published [Jones 04, Barnes 08]. The model uses an Ohm's law that includes the Hall term, pressure term and the electron inertia [Jones 04]. These results focused on the ion physics and assumed an isothermal electron closure. It is found in conventional gyrokinetic turbulence simulations that the timestep cannot be made much greater than the ion cyclotron period. However, the kinetic ion MHD model has the compressional mode, which further limits the timestep. They have developed an implicit scheme to avoid this timestep constraint. They have also added drift kinetic electrons. This model has been benchmarked linearly. Waves investigated where shear and compressional Alfven, whisterl, ion acoustic, and drift waves, including the kinetic damping rates. This work is ongoing and was first reported at the 2008 Sherwood Fusion Theory Conference [Chen 08] and they are working on a publication. They have also formulated an integrated gyrokinetic electron model, which is of interest for studying electron gradient instabilities and weak guide-field magnetic reconnection.

  13. Phase space structures in gyrokinetic simulations of fusion plasma turbulence

    NASA Astrophysics Data System (ADS)

    Ghendrih, Philippe; Norscini, Claudia; Cartier-Michaud, Thomas; Dif-Pradalier, Guilhem; Abiteboul, Jérémie; Dong, Yue; Garbet, Xavier; Gürcan, Ozgür; Hennequin, Pascale; Grandgirard, Virginie; Latu, Guillaume; Morel, Pierre; Sarazin, Yanick; Storelli, Alexandre; Vermare, Laure

    2014-10-01

    Gyrokinetic simulations of fusion plasmas give extensive information in 5D on turbulence and transport. This paper highlights a few of these challenging physics in global, flux driven simulations using experimental inputs from Tore Supra shot TS45511. The electrostatic gyrokinetic code GYSELA is used for these simulations. The 3D structure of avalanches indicates that these structures propagate radially at localised toroidal angles and then expand along the field line at sound speed to form the filaments. Analysing the poloidal mode structure of the potential fluctuations (at a given toroidal location), one finds that the low modes m = 0 and m = 1 exhibit a global structure; the magnitude of the m = 0 mode is much larger than that of the m = 1 mode. The shear layers of the corrugation structures are thus found to be dominated by the m = 0 contribution, that are comparable to that of the zonal flows. This global mode seems to localise the m = 2 mode but has little effect on the localisation of the higher mode numbers. However when analysing the pulsation of the latter modes one finds that all modes exhibit a similar phase velocity, comparable to the local zonal flow velocity. The consequent dispersion like relation between the modes pulsation and the mode numbers provides a means to measure the zonal flow. Temperature fluctuations and the turbulent heat flux are localised between the corrugation structures. Temperature fluctuations are found to exhibit two scales, small fluctuations that are localised by the corrugation shear layers, and appear to bounce back and forth radially, and large fluctuations, also readily observed on the flux, which are associated to the disruption of the corrugations. The radial ballistic velocity of both avalanche events if of the order of 0.5ρ∗c0 where ρ∗ = ρ0/a, a being the tokamak minor radius and ρ0 being the characteristic Larmor radius, ρ0 = c0/Ω0. c0 is the reference ion thermal velocity and Ω0 = qiB0/mi the reference

  14. Gyrokinetic Simulation of Energetic Particles Turbulence and Transport in Fusion Plasmas

    NASA Astrophysics Data System (ADS)

    Zhang, Wenlu; Lin, Zhihong; Holod, Ihor; Xiao, Yong; Bierwage, Andreas; Spong, Donald; Chu, Ming

    2009-05-01

    The confinement of the energetic particles (EP) is a critical issue in the International Thermonuclear Experimental Reactor (ITER), since that ignition relies on the self-heating by the fusion products. Shear Alfven wave excitations by EP in toroidal systems, for example Toroidal Alfven Eigenmode (TAE) and Energetic Particle Mode (EPM) have been investigated as primary candidate for fluctuation-induced transport of EP in fusion plasma. In this work, TAE excitations by energetic particles are investigated in large scale first-principle simulations of fusion plasmas using the global gyrokinetic toroidal code (GTC) [Lin, Science 1998]. Comprehensive linear benchmarking results are reported between GTC, GYRO, fluid code TAEFL, and Magnetohydrodynamic-gyrokinetic hybrid code HMGC.

  15. Applications of large eddy simulation methods to gyrokinetic turbulence

    SciTech Connect

    Bañón Navarro, A. Happel, T.; Teaca, B. [Applied Mathematics Research Centre, Coventry University, Coventry CV1 5FB; Max-Planck für Sonnensystemforschung, Max-Planck-Str. 2, D-37191 Katlenburg-Lindau; Max-Planck Jenko, F. [Max-Planck-Institut für Plasmaphysik, EURATOM Association, D-85748 Garching; Max-Planck Hammett, G. W. [Max-Planck Collaboration: ASDEX Upgrade Team

    2014-03-15

    The large eddy simulation (LES) approach—solving numerically the large scales of a turbulent system and accounting for the small-scale influence through a model—is applied to nonlinear gyrokinetic systems that are driven by a number of different microinstabilities. Comparisons between modeled, lower resolution, and higher resolution simulations are performed for an experimental measurable quantity, the electron density fluctuation spectrum. Moreover, the validation and applicability of LES is demonstrated through a series of diagnostics based on the free energetics of the system.

  16. Gyrokinetic simulation of isotope scaling in tokamak plasmas

    SciTech Connect

    Lee, W.W.; Santoro, R.A.

    1995-07-01

    A three-dimensional global gyrokinetic particle code in toroidal geometry has been used for investigating the transport properties of ion temperature gradient (ITG) drift instabilities in tokamak plasmas. Using the isotopes of hydrogen (H{sup +}), deuterium (D{sup +}) and tritium (T{sup +}), we have found that, under otherwise identical conditions, there exists a favorable isotope scaling for the ion thermal diffusivity, i.e., Xi decreases with mass. Such a scaling, which exists both at the saturation of the instability and also at the nonlinear steady state, can be understood from the resulting wavenumber and frequency spectra.

  17. Optimized Loading for Particle-in-cell Gyrokinetic Simulations

    SciTech Connect

    J.L.V. Lewandowski

    2004-05-13

    The problem of particle loading in particle-in-cell gyrokinetic simulations is addressed using a quadratic optimization algorithm. Optimized loading in configuration space dramatically reduces the short wavelength modes in the electrostatic potential that are partly responsible for the non-conservation of total energy; further, the long wavelength modes are resolved with good accuracy. As a result, the conservation of energy for the optimized loading is much better that the conservation of energy for the random loading. The method is valid for any geometry and can be coupled to optimization algorithms in velocity space.

  18. Gyrokinetic particle simulation of fast-electron driven beta-induced Aflvén eigenmode

    NASA Astrophysics Data System (ADS)

    Cheng, Junyi; Zhang, Wenlu; Lin, Zhihong; Holod, Ihor; Li, Ding; Chen, Yang; Cao, Jintao

    2016-05-01

    The fast-electron driven beta-induced Alfvén eigenmode (e-BAE) in toroidal plasmas is investigated for the first time using global gyrokinetic particle simulations, where the fast electron is described by the drift kinetic equation. The simulation shows that the e-BAE propagates in the fast electron diamagnetic direction and its polarization is close to an ideal MHD mode. The phase space structure shows that only the fast electron processional resonance is responsible for the e-BAE excitations while fast-ion driven BAE can be excited through all the channels, including transit, bounce, and processional resonance.

  19. Effects of the magnetic equilibrium on gyrokinetic simulations of tokamak microinstabilities

    SciTech Connect

    Wan, Weigang; Chen, Yang; Parker, Scott E.; Groebner, Richard J.

    2015-06-15

    The general geometry of the experimental tokamak magnetic equilibrium is implemented in the global gyrokinetic simulation code GEM. Compared to the general geometry, the well used Miller parameterization of the magnetic equilibrium is a good approximation in the core region and up to the top of the pedestal. Linear simulations indicate that results with the two geometries agree for r/a ≤ 0.9. However, in the edge region, the instabilities are sensitive to the magnetic equilibrium in both the L-mode and the H-mode plasmas. A small variation of the plasma shaping parameters leads to large changes to the edge instability.

  20. Direct identification of predator-prey dynamics in gyrokinetic simulations

    SciTech Connect

    Kobayashi, Sumire Gürcan, Özgür D; Diamond, Patrick H.

    2015-09-15

    The interaction between spontaneously formed zonal flows and small-scale turbulence in nonlinear gyrokinetic simulations is explored in a shearless closed field line geometry. It is found that when clear limit cycle oscillations prevail, the observed turbulent dynamics can be quantitatively captured by a simple Lotka-Volterra type predator-prey model. Fitting the time traces of full gyrokinetic simulations by such a reduced model allows extraction of the model coefficients. Scanning physical plasma parameters, such as collisionality and density gradient, it was observed that the effective growth rates of turbulence (i.e., the prey) remain roughly constant, in spite of the higher and varying level of primary mode linear growth rates. The effective growth rate that was extracted corresponds roughly to the zonal-flow-modified primary mode growth rate. It was also observed that the effective damping of zonal flows (i.e., the predator) in the parameter range, where clear predator-prey dynamics is observed, (i.e., near marginal stability) agrees with the collisional damping expected in these simulations. This implies that the Kelvin-Helmholtz-like instability may be negligible in this range. The results imply that when the tertiary instability plays a role, the dynamics becomes more complex than a simple Lotka-Volterra predator prey.

  1. What happens to full-f gyrokinetic transport and turbulence in a toroidal wedge simulation?

    DOE PAGES

    Kim, Kyuho; Chang, C. S.; Seo, Janghoon; ...

    2017-01-24

    Here, in order to save the computing time or to fit the simulation size into a limited computing hardware in a gyrokinetic turbulence simulation of a tokamak plasma, a toroidal wedge simulation may be utilized in which only a partial toroidal section is modeled with a periodic boundary condition in the toroidal direction. The most severe restriction in the wedge simulation is expected to be in the longest wavelength turbulence, i.e., ion temperature gradient (ITG) driven turbulence. The global full-f gyrokinetic code XGC1 is used to compare the transport and turbulence properties from a toroidal wedge simulation against the fullmore » torus simulation in an ITG unstable plasma in a model toroidal geometry. It is found that (1) the convergence study in the wedge number needs to be conducted all the way down to the full torus in order to avoid a false convergence, (2) a reasonably accurate simulation can be performed if the correct wedge number N can be identified, (3) the validity of a wedge simulation may be checked by performing a wave-number spectral analysis of the turbulence amplitude |δΦ| and assuring that the variation of δΦ between the discrete kθ values is less than 25% compared to the peak |δΦ|, and (4) a frequency spectrum may not be used for the validity check of a wedge simulation.« less

  2. What happens to full-f gyrokinetic transport and turbulence in a toroidal wedge simulation?

    NASA Astrophysics Data System (ADS)

    Kim, Kyuho; Chang, C. S.; Seo, Janghoon; Ku, S.; Choe, W.

    2017-01-01

    In order to save the computing time or to fit the simulation size into a limited computing hardware in a gyrokinetic turbulence simulation of a tokamak plasma, a toroidal wedge simulation may be utilized in which only a partial toroidal section is modeled with a periodic boundary condition in the toroidal direction. The most severe restriction in the wedge simulation is expected to be in the longest wavelength turbulence, i.e., ion temperature gradient (ITG) driven turbulence. The global full-f gyrokinetic code XGC1 is used to compare the transport and turbulence properties from a toroidal wedge simulation against the full torus simulation in an ITG unstable plasma in a model toroidal geometry. It is found that (1) the convergence study in the wedge number needs to be conducted all the way down to the full torus in order to avoid a false convergence, (2) a reasonably accurate simulation can be performed if the correct wedge number N can be identified, (3) the validity of a wedge simulation may be checked by performing a wave-number spectral analysis of the turbulence amplitude |δΦ| and assuring that the variation of δΦ between the discrete kθ values is less than 25% compared to the peak |δΦ| , and (4) a frequency spectrum may not be used for the validity check of a wedge simulation.

  3. Gyrokinetic theory and simulation of angular momentum transport

    SciTech Connect

    Waltz, R. E.; Staebler, G. M.; Candy, J.; Hinton, F. L.

    2007-12-15

    A gyrokinetic theory of turbulent toroidal angular momentum transport as well as modifications to neoclassical poloidal rotation from turbulence is formulated starting from the fundamental six-dimensional kinetic equation. The gyro-Bohm scaled transport is evaluated from toroidal delta-f gyrokinetic simulations using the GYRO code [Candy and Waltz, J. Comput. Phys. 186, 545 (2003)]. The simulations recover two pinch mechanisms in the radial transport of toroidal angular momentum: The slab geometry ExB shear pinch [Dominguez and Staebler, Phys. Fluids B 5, 387 (1993)] and the toroidal geometry 'Coriolis' pinch [Peeters, Angioni, and Strintzi, Phys. Rev. Lett. 98, 265003 (2007)]. The pinches allow the steady state null stress (or angular momentum transport flow) condition required to understand intrinsic (or spontaneous) toroidal rotation in heated tokamak without an internal source of torque [Staebler, Kinsey, and Waltz, Bull. Am. Phys. Soc. 46, 221 (2001)]. A predicted turbulent shift in the neoclassical poloidal rotation [Staebler, Phys. Plasmas 11, 1064 (2004)] appears to be small at the finite relative gyroradius (rho-star) of current experiments.

  4. Toroidal universal drift instability: A global gyrokinetic study

    SciTech Connect

    Chowdhury, J.; Ganesh, R.; Brunner, S.; Vaclavik, J.; Villard, L.

    2010-10-15

    An electron density gradient driven instability identified as the toroidal branch of the universal drift instability is studied using a global gyrokinetic model treating both electrons and ions fully nonadiabatically and valid at all orders in the ratio of the Larmor radius to the wavelength. The physics of the magnetic drift resonance, Landau resonance and transit resonance, which are considered to be important for the toroidal universal mode, are kept for both species. A systematic parametric study is carried out for the mode. The toroidal universal drift mode is observed to sustain finite temperature gradient and can thus coexist with the temperature gradient driven modes and may contribute to the observed particle transport along with other drift modes. Especially at intermediate scales between the ion temperature gradient driven mode and electron temperature gradient driven mode, this branch of the drift instability can also be a plausible candidate for the observed particle loss. The effect of magnetic fluctuations on the mode is also investigated. In contrast to the slab mode, the toroidal branch of the universal drift mode is found to be strongly stabilized by electromagnetic effects at finite plasma {beta}. Finally, the effect of trapped electrons on the universal mode is studied and compared with the other possible modes in the same parameter regime, namely, ion temperature gradient mode in the presence of trapped electrons and pure trapped electron modes.

  5. Implications of advanced collision operators for gyrokinetic simulation

    NASA Astrophysics Data System (ADS)

    Belli, E. A.; Candy, J.

    2017-04-01

    In this work, we explore both the potential improvements and pitfalls that arise when using advanced collision models in gyrokinetic simulations of plasma microinstabilities. Comparisons are made between the simple-but-standard electron Lorentz operator and specific variations of the advanced Sugama operator. The Sugama operator describes multi-species collisions including energy diffusion, momentum and energy conservation terms, and is valid for arbitrary wavelength. We report scans over collision frequency for both low and high {k}θ {ρ }s modes, with relevance for multiscale simulations that couple ion and electron scale physics. The influence of the ion–ion collision terms—not retained in the electron Lorentz model—on the damping of zonal flows is also explored. Collision frequency scans for linear and nonlinear simulations of ion-temperature-gradient instabilities including impurity ions are presented. Finally, implications for modeling turbulence in the highly collisional edge are discussed.

  6. Gyrokinetic simulation and theory for kinetic ballooning mode

    NASA Astrophysics Data System (ADS)

    Li, Yue-Yan; Xiao, Yong

    2016-10-01

    The kinetic ballooning mode (KBM) plays an important role in H mode formation and edge-localized mode (ELM) physics and internal transport barrier. A thorough understanding of the linear KBM physics is crucial to understanding the nonlinear edge physics in tokamaks. The second stability regime in small shear and sufficiently large pressure gradient has been predicted by the ballooning MHD theory. In the present work, a kinetic ballooning mode is found for the second stability regime in s-alpha space. This KBM mode is characterized by a broad-spread eigenfunction in the ballooning space, and destabilized dramatically by the ion temperature gradient. Such KBM mode almost exists in the entire second stability regime. Also KBM has been found in the sufficiently small shear even with negative shear. The gyrokinetic code GTC is employed to study the KBM physics, and finds that the linear KBM growth rate and frequency are very sensitive to the equilibrium profile. The effect of parallel current and density has been investigated, and comparisons between gyrokinetic simulation and analytic theory are carried out. The results shows that parallel current response have a strong effect in stabilize KBM instability, which could have a large effect on nonlinear electromagnetic turbulent transport.

  7. Gyrokinetic particle-in-cell simulations of Alfvén eigenmodes in presence of continuum effects

    SciTech Connect

    Mishchenko, Alexey Könies, Axel; Hatzky, Roman

    2014-05-15

    First-principle gyrokinetic particle-in-cell simulations of a global Toroidal Alfvén Eigenmode (TAE) are undertaken in the presence of a strong coupling with the continuum. Effects of the bulk plasma temperature on the interplay between the TAE and Kinetic Alfvén Waves (KAWs) are investigated. A global TAE-KAW structure is identified which appears to be more unstable with respect to the fast ions than a simple (fluid-like) TAE mode.

  8. Gyrokinetic particle simulation of microturbulence for general magnetic geometry and experimental profiles

    SciTech Connect

    Xiao, Yong; Holod, Ihor; Wang, Zhixuan; Lin, Zhihong; Zhang, Taige

    2015-02-15

    Developments in gyrokinetic particle simulation enable the gyrokinetic toroidal code (GTC) to simulate turbulent transport in tokamaks with realistic equilibrium profiles and plasma geometry, which is a critical step in the code–experiment validation process. These new developments include numerical equilibrium representation using B-splines, a new Poisson solver based on finite difference using field-aligned mesh and magnetic flux coordinates, a new zonal flow solver for general geometry, and improvements on the conventional four-point gyroaverage with nonuniform background marker loading. The gyrokinetic Poisson equation is solved in the perpendicular plane instead of the poloidal plane. Exploiting these new features, GTC is able to simulate a typical DIII-D discharge with experimental magnetic geometry and profiles. The simulated turbulent heat diffusivity and its radial profile show good agreement with other gyrokinetic codes. The newly developed nonuniform loading method provides a modified radial transport profile to that of the conventional uniform loading method.

  9. Uncertainty estimation and a stopping rule in nonlinear gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Oberparleiter, Michael; Nordman, Hans; Verdoolaege, Geert; Jenko, Frank

    2016-11-01

    We present a method to estimate the mean and uncertainty of fluctuating quantities, such as spatially averaged density and temperature fluctuations or radial fluxes, from initial value simulations of the Eulerian gyrokinetic code GENE[1, 2]. Since the time series are autocorrelated in time, the data is grouped into batches based on the autocorrelation time and their means form the sample for further statistical treatment, such as calculating the standard error of the mean.Based on this uncertainty estimate we develop a stopping rule for a nonlinear simulation: First, regression tests ensure that it has reached a stationary (quasisteady) state and data before this point is discarded. Then the previously described estimate is calculated. If the estimated relative error is below a prescribed threshold, the simulation is stopped. This scheme is applied to several previously performed GENE simulations ranging from simple benchmarks to modelling of JET and ASDEX discharges. It can be demonstrated that a number of simulations could be around 30% shorter if a maximal statistical relative uncertainty of 5% is desired for all monitored quantities.

  10. Shear-Alfv'en Waves in Gyrokinetic Particle Simulation

    NASA Astrophysics Data System (ADS)

    Dickerson, Thomas D.; Startsev, Edward A.; Lee, W. W.

    2012-10-01

    Numerical properties of shear-Alfv'en waves in slab geometry have been studied using a Particle-in-Cell code implementing the recently developed double split-weight scheme [1]. This scheme separates the non-adiabatic response of the particles from both their adiabatic responses and the field-line bending effects arising from the background density and temperature gradients of both the electrons and the ions. This scheme is an improvement over the original split-weight scheme [2] in the presence of the zeroth-order inhomogeneities. The present studies consist of testing numerical restrictions on temporal resolution in the simulation of these waves in one and two dimensions, and on spatial resolutions on the formation of shear Alfv'en eigenmodes in two dimensional sheared slab simulations. For example, it is found that the correct behavior of ion temperature gradient modes in terms of frequencies and growth rates can be maintained with time steps larger than the limit imposed by the shear-Alfven waves. Details will be reported.[4pt] [1] E. A. Startsev and W. W. Lee, ``Finite-Beta Simulation of Microinstabilities,'' manuscript in preparation (2012). [0pt] [2] W. W. Lee, J. L. V. Lewandowski, T. S. Hahm and Z. Lin, ``Shear-Alf'en Waves in Gyrokinetic Plasmas,'' Phys. Plasmas 10, 4435 (2001).

  11. Full-f gyrokinetic simulation over a confinement time

    SciTech Connect

    Idomura, Yasuhiro

    2014-02-15

    A long time ion temperature gradient driven turbulence simulation over a confinement time is performed using the full-f gyrokinetic Eulerian code GT5D. The convergence of steady temperature and rotation profiles is examined, and it is shown that the profile relaxation can be significantly accelerated when the simulation is initialized with linearly unstable temperature profiles. In the steady state, the temperature profile and the ion heat diffusivity are self-consistently determined by the power balance condition, while the intrinsic rotation profile is sustained by complicated momentum transport processes without momentum input. The steady turbulent momentum transport is characterized by bursty non-diffusive fluxes, and the resulting turbulent residual stress is consistent with the profile shear stress theory [Y. Camenen et al., “Consequences of profile shearing on toroidal momentum transport,” Nucl. Fusion 51, 073039 (2011)] in which the residual stress depends not only on the profile shear and the radial electric field shear but also on the radial electric field itself. Based on the toroidal angular momentum conservation, it is found that in the steady null momentum transport state, the turbulent residual stress is cancelled by the neoclassical counterpart, which is greatly enhanced in the presence of turbulent fluctuations.

  12. Non-Maxwellian background effects in gyrokinetic simulations with GENE

    NASA Astrophysics Data System (ADS)

    Di Siena, A.; Görier, T.; Doerk, H.; Citrin, J.; Johnson, T.; Schneider, M.; Poli, E.; Contributors, JET

    2016-11-01

    The interaction between fast particles and core turbulence has been established as a central issue for a tokamak reactor. Recent results predict significant enhancement of electromagnetic stabilisation of ITG turbulence in the presence of fast ions. However, most of these simulations were performed with the assumption of equivalent Maxwellian distributed particles, whereas to rigorously model fast ions, a non-Maxwellian background distribution function is needed. To this aim, the underlying equations in the gyrokinetic code GENE have been re-derived and implemented for a completely general background distribution function. After verification studies, a previous investigation on a particular JET plasma has been revised with linear simulations. The plasma is composed by Deuterium, electron, Carbon impurities, NBI fast Deuterium and ICRH 3He. Fast particle distributions have been modelled with a number of different analytic choices in order to study the impact of non-Maxwellian distributions on the plasma turbulence: slowing down and anisotropic Maxwellian. Linear growth rates are studied as a function of the wave number and compared with those obtained using an equivalent Maxwellian. Generally, the choice of the 3He distribution seems to have a stronger impact on the microinstabilities than that of the fast Deuterium.

  13. The linear tearing instability in three dimensional, toroidal gyro-kinetic simulations

    SciTech Connect

    Hornsby, W. A. Migliano, P.; Buchholz, R.; Kroenert, L.; Weikl, A.; Peeters, A. G.; Zarzoso, D.; Poli, E.; Casson, F. J.

    2015-02-15

    Linear gyro-kinetic simulations of the classical tearing mode in three-dimensional toroidal geometry were performed using the global gyro-kinetic turbulence code, GKW. The results were benchmarked against a cylindrical ideal MHD and analytical theory calculations. The stability, growth rate, and frequency of the mode were investigated by varying the current profile, collisionality, and the pressure gradients. Both collisionless and semi-collisional tearing modes were found with a smooth transition between the two. A residual, finite, rotation frequency of the mode even in the absence of a pressure gradient is observed, which is attributed to toroidal finite Larmor-radius effects. When a pressure gradient is present at low collisionality, the mode rotates at the expected electron diamagnetic frequency. However, the island rotation reverses direction at high collisionality. The growth rate is found to follow a η{sup 1∕7} scaling with collisional resistivity in the semi-collisional regime, closely following the semi-collisional scaling found by Fitzpatrick. The stability of the mode closely follows the stability analysis as performed by Hastie et al. using the same current and safety factor profiles but for cylindrical geometry, however, here a modification due to toroidal coupling and pressure effects is seen.

  14. Gyrokinetic Simulation of Microturbulent Saturation at Finite β

    NASA Astrophysics Data System (ADS)

    Terry, P. W.; Pueschel, M. J.; Carmody, D.; Whelan, G. G.

    2014-10-01

    Saturation and zonal flow physics for microturbulence is investigated for tokamaks and the RFP using gyrokinetic computation to understand scalings with respect magnetic shear and β. Modeling an MST discharge shows that the critical instability gradient for TEM is higher than the tokamak threshold by the aspect ratio (R / a) . This factor is rooted in the shorter magnetic field scale length of the RFP. Nonlinear simulations show strong zonal flows and a large Dimits shift exceeding the tokamak shift by a factor of order (R / a) . The non zonal transition (NZT), a critical β for which zonal flows are disabled by flutter-induced charge loss is also considered. The critical β occurs when the radial displacement of a magnetic field line over a half connection length is equal to the radial correlation length. These quantities scale with the connection length and magnetic drift scale lengths entering the instability threshold and quasilinear diffusivities, making the RFP critical β for NZT higher than the tokamak value by (R / a) 1 . 5 times tokamak q. These results are consistent with magnetic shear and q dependence in the kinetic ballooning threshold, indicating that β effects will only arise at high β relative to typical RFP operation.

  15. Gyrokinetic Simulation of Reverse Shear Alfven Eigenmodes in DIII-D Plasmas

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Parker, Scott; Fu, Guo-Yong

    2012-03-01

    We present simulation results of the beam driven Reverse Shear Alfven Eigenmodes (RSAE) observed in DIII-D discharge 142111 using the Particle-in-Cell gyrokinetic code GEM [1]. Bulk ions and energetic particles are gyrokinetic, but electrons are described by a mass-less fluid model. Two schemes for obtaining the electric potential are implemented, one by solving the gyrokinetic Poisson equation for φ directly, the other by solving the gyrokinetic moment (GKM) equation for φ/t and then integrating in time. The GKM approach is found to be more robust for linear simulations (allowing larger time steps) but less robust for nonlinear simulations. Previous simulations reproduced the chirping in frequency as seen in the experiment. Recently it has been reported by other simulation codes (GTC, GYRO and TAEFL) that the shearing direction of the mode structure in the poloidal plane disagrees with observation. We found that the mode structure, including the shearing in the poloidal plane, is in general sensitive to the beam distribution. By changing the radial profile of the beam density while keeping the velocity dependence fixed, both shearing directions can be produced in the simulation. [4pt] [1] Y. Chen and S. E. Parker, J. Comp. Phys. 220, 839 (2007)

  16. Steady-State Gyrokinetics Transport Code (SSGKT), A Scientific Application Partnership with the Framework Application for Core-Edge Transport Simulations, Final Report

    SciTech Connect

    Fahey, Mark R.; Candy, Jeff

    2013-11-07

    This project initiated the development of TGYRO ? a steady-state Gyrokinetic transport code (SSGKT) that integrates micro-scale GYRO turbulence simulations into a framework for practical multi-scale simulation of conventional tokamaks as well as future reactors. Using a lightweight master transport code, multiple independent (each massively parallel) gyrokinetic simulations are coordinated. The capability to evolve profiles using the TGLF model was also added to TGYRO and represents a more typical use-case for TGYRO. The goal of the project was to develop a steady-state Gyrokinetic transport code (SSGKT) that integrates micro-scale gyrokinetic turbulence simulations into a framework for practical multi-scale simulation of a burning plasma core ? the International Thermonuclear Experimental Reactor (ITER) in particular. This multi-scale simulation capability will be used to predict the performance (the fusion energy gain, Q) given the H-mode pedestal temperature and density. At present, projections of this type rely on transport models like GLF23, which are based on rather approximate fits to the results of linear and nonlinear simulations. Our goal is to make these performance projections with precise nonlinear gyrokinetic simulations. The method of approach is to use a lightweight master transport code to coordinate multiple independent (each massively parallel) gyrokinetic simulations using the GYRO code. This project targets the practical multi-scale simulation of a reactor core plasma in order to predict the core temperature and density profiles given the H-mode pedestal temperature and density. A master transport code will provide feedback to O(16) independent gyrokinetic simulations (each massively parallel). A successful feedback scheme offers a novel approach to predictive modeling of an important national and international problem. Success in this area of fusion simulations will allow US scientists to direct the research path of ITER over the next two

  17. Multiscale investigations of drift-wave turbulence and plasma flows: measurements and total-distribution-function gyrokinetic simulations.

    PubMed

    Leerink, S; Bulanin, V V; Gurchenko, A D; Gusakov, E Z; Heikkinen, J A; Janhunen, S J; Lashkul, S I; Altukhov, A B; Esipov, L A; Kantor, M Yu; Kiviniemi, T P; Korpilo, T; Kuprienko, D V; Petrov, A V

    2012-10-19

    Direct measurements of micro-, meso-, and macroscale transport phenomena in the FT-2 tokamak are shown to be quantitatively reproduced by global full f nonlinear gyrokinetic simulation predictions. A detailed agreement with mean equilibrium E×B flows, oscillating fine-scale zonal flows, and turbulence spectra observed by a set of sophisticated microwave backscattering techniques as well as a good fit of the thermal diffusivity data are demonstrated. A clear influence of the impurity ions on the fluctuating radial electric field is observed.

  18. Gyrokinetic Particle Simulation of Fast Electron Driven Beta-induced Alfven Eigenmodes

    NASA Astrophysics Data System (ADS)

    Zhang, Wenlu; Cheng, Junyi; Lin, Zhihong

    2016-10-01

    The fast electron driven beta induced Alfven eigenmode (e-BAE) has been routinely observed in HL-2A tokamak. We study e-BAE for the first time using global gyrokinetic GTC simulation, where the fast electrons are described by the drift kinetic model. Frequency chirping is observed in nonlinear simulations in the absence of sources and sinks, which provide a new nonlinear paradigm beyond the standard ``bump-on-tail'' model. For weakly driven case, nonlinear frequency is observed to be in phase with particle flux, and nonlinear mode structure is almost the same as linear stage. In the strongly driven case, BAAE is also unstable and co-exists with BAE after the BAE saturation. Analysis of nonlinear wave-particle interactions shows that the frequency chirping is induced by the nonlinear evolution of the coherent structures in the fast electron phase space, where the dynamics of the coherent structure is controlled by the formation and destruction of phrase space islands in the canonical variables. Zonal fields are found to affect wave-particle resonance in the nonlinear e-BAE simulations.

  19. Testing the high turbulence level breakdown of low-frequency gyrokinetics against high-frequency cyclokinetic simulations

    SciTech Connect

    Deng, Zhao; Waltz, R. E.

    2015-05-15

    This paper presents numerical simulations of the nonlinear cyclokinetic equations in the cyclotron harmonic representation [R. E. Waltz and Zhao Deng, Phys. Plasmas 20, 012507 (2013)]. Simulations are done with a local flux-tube geometry and with the parallel motion and variation suppressed using a newly developed rCYCLO code. Cyclokinetic simulations dynamically follow the high-frequency ion gyro-phase motion which is nonlinearly coupled into the low-frequency drift-waves possibly interrupting and suppressing gyro-averaging and increasing the transport over gyrokinetic levels. By comparing the more fundamental cyclokinetic simulations with the corresponding gyrokinetic simulations, the breakdown of gyrokinetics at high turbulence levels is quantitatively tested over a range of relative ion cyclotron frequency 10 < Ω*{sup  }< 100 where Ω*{sup  }= 1/ρ*, and ρ* is the relative ion gyroradius. The gyrokinetic linear mode rates closely match the cyclokinetic low-frequency rates for Ω*{sup  }> 5. Gyrokinetic transport recovers cyclokinetic transport at high relative ion cyclotron frequency (Ω*{sup  }≥ 50) and low turbulence level as required. Cyclokinetic transport is found to be lower than gyrokinetic transport at high turbulence levels and low-Ω* values with stable ion cyclotron (IC) modes. The gyrokinetic approximation is found to break down when the density perturbations exceed 20%. For cyclokinetic simulations with sufficiently unstable IC modes and sufficiently low Ω*{sup  }∼ 10, the high-frequency component of cyclokinetic transport level can exceed the gyrokinetic transport level. However, the low-frequency component of the cyclokinetic transport and turbulence level does not exceed that of gyrokinetics. At higher and more physically relevant Ω*{sup  }≥ 50 values and physically realistic IC driving rates, the low-frequency component of the cyclokinetic transport and turbulence level is still smaller than that of

  20. Gyrokinetic simulation of momentum transport with residual stress from diamagnetic level velocity shears

    SciTech Connect

    Waltz, R. E.; Staebler, G. M.; Solomon, W. M.

    2011-04-15

    Residual stress refers to the remaining toroidal angular momentum (TAM) flux (divided by major radius) when the shear in the equilibrium fluid toroidal velocity (and the velocity itself) vanishes. Previously [Waltz et al., Phys. Plasmas 14, 122507 (2007); errata 16, 079902 (2009)], we demonstrated with GYRO [Candy and Waltz, J. Comp. Phys. 186, 545 (2003)] gyrokinetic simulations that TAM pinching from (ion pressure gradient supported or diamagnetic level) equilibrium ExB velocity shear could provide some of the residual stress needed to support spontaneous toroidal rotation against normal diffusive loss. Here we show that diamagnetic level shear in the intrinsic drift wave velocities (or ''profile shear'' in the ion and electron density and temperature gradients) provides a comparable residual stress. The individual signed contributions of these small (rho-star level) ExB and profile velocity shear rates to the turbulence level and (rho-star squared) ion energy transport stabilization are additive if the rates are of the same sign. However because of the additive stabilization effect, the contributions to the small (rho-star cubed) residual stress is not always simply additive. If the rates differ in sign, the residual stress from one can buck out that from the other (and in some cases reduce the stabilization.) The residual stress from these diamagnetic velocity shear rates is quantified by the ratio of TAM flow to ion energy (power) flow (M/P) in a global GYRO core simulation of a ''null'' toroidal rotation DIII-D [Mahdavi and Luxon, Fusion Sci. Technol. 48, 2 (2005)] discharge by matching M/P profiles within experimental uncertainty. Comparison of global GYRO (ion and electron energy as well as particle) transport flow balance simulations of TAM transport flow in a high-rotation DIII-D L-mode quantifies and isolates the ExB shear and parallel velocity (Coriolis force) pinching components from the larger ''diffusive'' parallel velocity shear driven component and

  1. Turbulence and transport reduction with innovative plasma shapes in TCV -- correlation ECE measurement and gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Pochelon, Antoine

    2010-11-01

    Due to turbulence, core energy transport in tokamaks generally exceeds collisional transport by at least an order of magnitude. It is therefore crucial to understand the instabilities driving the turbulent state and to find ways to control them. Shaping the plasma is one of these fundamental tools. In low collisionality plasmas, such as in a reactor, changing triangularity from positive (delta=+0.4) to negative triangularity (delta=-0.4) is shown on TCV to reduce the energy transport by a factor two. This opens the possibility of having H-mode-like confinement time within an L-mode edge, or reduced ELMs. An optimum triangularity can be sought between steep edge barriers (delta>0), plagued by large ELMs, and improved core confinement (delta<0). Recent correlation ECE measurements show that the reduction of transport at negative delta is reflected in a reduction by a factor of two of both the amplitude of temperature fluctuations in the broadband frequency range 30-150 kHz, and the fluctuation correlation length, measured at mid-radius. In addition, the fluctuations amplitude is reduced with increasing collisionality, consistent with a reduction of the Trapped Electron Modes (TEM) drive. The effect of negative triangularity on turbulence and transport is compared to gyrokinetic code results: First, global linear simulations predict shorter radial TEM wavelength, consistent with the shorter radial turbulence correlation length observed. Second, at least close to the strongly shaped plasma boundary, local nonlinear simulations predict lower TEM induced transport with decreased triangularity. Calculations are now being extended to global nonlinear simulations.

  2. Gyrokinetic simulations of collisionless reconnection in turbulent non-uniform plasmas

    SciTech Connect

    Kobayashi, Sumire; Rogers, Barrett N.; Numata, Ryusuke

    2014-04-15

    We present nonlinear gyrokinetic simulations of collisionless magnetic reconnection with non-uniformities in the plasma density, the electron temperature, and the ion temperature. The density gradient can stabilize reconnection due to diamagnetic effects but destabilize driftwave modes that produce turbulence. The electron temperature gradient triggers microtearing modes that drive rapid small-scale reconnection and strong electron heat transport. The ion temperature gradient destabilizes ion temperature gradient modes that, like the driftwaves, may enhance reconnection in some cases.

  3. Testing the High Turbulence Level Breakdown of Low-Frequency Gyrokinetics Against High-Frequency Cyclokinetic Simulations

    NASA Astrophysics Data System (ADS)

    Deng, Zhao

    2014-10-01

    Gyrokinetic simulations of L-mode near edge tokamak plasmas with the GYRO code underpredict both the transport and the turbulence levels by 5 to 10 fold, which suggest either some important mechanism is missing from current gyrokinetic codes like GYRO or the gyrokinetic approximation itself is breaking down. It is known that GYRO drift-kinetic simulations with gyro-averaging suppressed recover most of the missing transport. With these motivations, we developed a flux tube nonlinear cyclokinetic code rCYCLO with the parallel motion and variation suppressed. rCYCLO dynamically follows the high frequency ion gyro-phase motion (with no averaging) which is nonlinearly coupled into the low frequency drift-waves thereby interrupting and possibly suppressing the gyro-averaging. By comparison with the corresponding gyrokinetic simulations, we can test the conditions for the breakdown of gyrokinetics. rCYCLO nonlinearly couples ∇B driven ion temperature gradient (ITG) modes and collisional fluid electron drift modes to ion cyclotron (IC) modes. As required, rCYCLO cyclokinetic transport recovers gyrokinetics at high relative ion cyclotron frequency (Ω*) and low turbulence levels. However, because the IC modes are stable and act as a turbulence sink, we have found that at high turbulence levels and low-Ω* cyclokinetic transport is lower (not higher) than gyrokinetic transport. Work is in progress with unstable IC modes to explore the possibility of driving cyclokinetic transport higher than gyrokinetic transport. Supported by the CSC, NSFC No. 1126114032, No. 10975012 ITER-CN No. 2013GB112006 and the US DOE under DE-FG02-95ER54309.

  4. Gyrokinetic Simulations of Electrostatic Turbulence Reduction due to Radial Electric Field Shear in DIII-D

    NASA Astrophysics Data System (ADS)

    Taimourzadeh, Sam; Holod, Ihor; Lin, Zhihong; Nazikian, Raffi

    2015-11-01

    It has been demonstrated that edge localized modes (ELMs) can be fully suppressed in DIII-D H-mode plasmas with the application of resonant magnetic perturbations (RMPs), and that there is a corresponding reduction of pedestal gradients, changes in rotation, and changes in the radial electric field (Er) profile. However, with the application of RMPs there is also an increase in short wavelength, electrostatic turbulence on top of the pedestal, as observed with BES, DBS, and other fluctuation diagnostics. The effects of Er shear on this turbulence, is investigated using gyrokinetic simulations via the gyrokinetic toroidal code (GTC) for in DIII-D shot 158103, at times 3750 ms (RMP on, ELM active) and 3050 ms (RMP on, ELM suppressed).

  5. Fluid electron, gyrokinetic ion simulations of linear internal kink and energetic particle modes

    NASA Astrophysics Data System (ADS)

    Cole, Michael; Mishchenko, Alexey; Könies, Axel; Kleiber, Ralf; Borchardt, Matthias

    2014-07-01

    The internal kink mode is an important plasma instability responsible for a broad class of undesirable phenomena in tokamaks, including the sawtooth cycle and fishbones. To predict and discover ways to mitigate this behaviour in current and future devices, numerical simulations are necessary. The internal kink mode can be modelled by reduced magnetohydrodynamics (MHD). Fishbone modes are an inherently kinetic and non-linear phenomenon based on the n = 1 Energetic Particle Mode (EPM), and have been studied using hybrid codes that combine a reduced MHD bulk plasma model with a kinetic treatment of fast ions. In this work, linear simulations are presented using a hybrid model which couples a fluid treatment of electrons with a gyrokinetic treatment of both bulk and fast ions. Studies of the internal kink mode in geometry relevant to large tokamak experiments are presented and the effect of gyrokinetic ions is considered. Interaction of the kink with gyrokinetic fast ions is also considered, including the destabilisation of the linear n = 1 EPM underlying the fishbone.

  6. Fluid electron, gyrokinetic ion simulations of linear internal kink and energetic particle modes

    SciTech Connect

    Cole, Michael Mishchenko, Alexey; Könies, Axel; Kleiber, Ralf; Borchardt, Matthias

    2014-07-15

    The internal kink mode is an important plasma instability responsible for a broad class of undesirable phenomena in tokamaks, including the sawtooth cycle and fishbones. To predict and discover ways to mitigate this behaviour in current and future devices, numerical simulations are necessary. The internal kink mode can be modelled by reduced magnetohydrodynamics (MHD). Fishbone modes are an inherently kinetic and non-linear phenomenon based on the n = 1 Energetic Particle Mode (EPM), and have been studied using hybrid codes that combine a reduced MHD bulk plasma model with a kinetic treatment of fast ions. In this work, linear simulations are presented using a hybrid model which couples a fluid treatment of electrons with a gyrokinetic treatment of both bulk and fast ions. Studies of the internal kink mode in geometry relevant to large tokamak experiments are presented and the effect of gyrokinetic ions is considered. Interaction of the kink with gyrokinetic fast ions is also considered, including the destabilisation of the linear n = 1 EPM underlying the fishbone.

  7. Global gyrokinetic stability of collisionless microtearing modes in large aspect ratio tokamaks

    SciTech Connect

    Swamy, Aditya K.; Ganesh, R.; Chowdhury, J.; Brunner, S.; Vaclavik, J.; Villard, L.

    2014-08-15

    Linear full radius gyrokinetic calculations show the existence of unstable microtearing modes (MTMs) in purely collisionless, high temperature, large aspect ratio tokamak plasmas. The present study takes into account fully gyrokinetic highly passing ions and electrons. The global 2-D structures of the collisionless mode with full radius coupling of the poloidal modes is obtained and compared with another electromagnetic mode, namely, the Alfvén Ion Temperature Gradient (AITG) mode (or Kinetic Ballooning Mode, KBM) for the same equilibrium profile. Several important characteristics of the modes are brought out and compared, such as a clear signature in the symmetry properties of the two modes, the plasma–β dependence, and radial and poloidal length scales of the electrostatic and magnetic vector potential fluctuations. Extensive parameter scans for this collisionless microtearing mode reveal the scaling of the growth rate with β and the electron temperature gradient η{sub e}. Scans at different β values show an inverse relationship between the η{sub e} threshold and β, leading to a stability diagram, and implying that the mode might exist at moderate to strong temperature gradients for finite β plasmas in large aspect ratio tokamaks. In contrast to small aspect ratio tokamaks where the trapped electron magnetic drift resonance is found to be important, in large aspect ratio tokamaks, a strong destabilization due to the magnetic drift resonance of passing electrons is observed and is identified as a possible collisionless drive mechanism for the collisionless MTM.

  8. A circular equilibrium model for local gyrokinetic simulations of ion temperature gradient fluctuations in reversed field pinches

    SciTech Connect

    Tangri, Varun; Terry, P. W.; Waltz, R. E.

    2011-05-15

    A simple large-aspect-ratio (R{sub 0}/r) circular equilibrium model is developed for low-beta reversed field pinch (RFP) geometry. The model is suitable for treating small scale instability and turbulent transport driven by ion temperature gradient (ITG) and related electron drift modes in gyrokinetic simulations. The equilibrium model is an RFP generalization of the common tokamak s-{alpha} model to small safety factor (q), where the poloidal field dominates the toroidal field. The model accommodates the RFP toroidal field reversal (where q vanishes) by generalizing the cylindrical force-free Bessel function model (BFM) [J. B. Taylor, Phys. Rev. Lett. 33, 1139 (1974)] to toroidal geometry. The global equilibrium can be described in terms of the RFP field reversal and pinch parameters [F,{Theta}]. This new toroidal Bessel function model (TBFM) has been incorporated into the gyrokinetic code GYRO [J. Candy and R. E. Waltz, J.Comput. Phys. 186, 545 (2003)] and used here to explore local electrostatic ITG adiabatic electron instability rates for typical low-q RFP parameters.

  9. Gyrokinetic simulation of edge blobs and divertor heat-load footprint

    NASA Astrophysics Data System (ADS)

    Chang, C. S.; Ku, S.; Hager, R.; Churchill, M.; D'Azevedo, E.; Worley, P.

    2015-11-01

    Gyrokinetic study of divertor heat-load width Lq has been performed using the edge gyrokinetic code XGC1. Both neoclassical and electrostatic turbulence physics are self-consistently included in the simulation with fully nonlinear Fokker-Planck collision operation and neutral recycling. Gyrokinetic ions and drift kinetic electrons constitute the plasma in realistic magnetic separatrix geometry. The electron density fluctuations from nonlinear turbulence form blobs, as similarly seen in the experiments. DIII-D and NSTX geometries have been used to represent today's conventional and tight aspect ratio tokamaks. XGC1 shows that the ion neoclassical orbit dynamics dominates over the blob physics in setting Lq in the sample DIII-D and NSTX plasmas, re-discovering the experimentally observed 1/Ip type scaling. Magnitude of Lq is in the right ballpark, too, in comparison with experimental data. However, in an ITER standard plasma, XGC1 shows that the negligible neoclassical orbit excursion effect makes the blob dynamics to dominate Lq. Differently from Lq 1mm (when mapped back to outboard midplane) as was predicted by simple-minded extrapolation from the present-day data, XGC1 shows that Lq in ITER is about 1 cm that is somewhat smaller than the average blob size. Supported by US DOE and the INCITE program.

  10. Neoclassical simulation of tokamak plasmas using the continuum gyrokinetic code TEMPEST.

    PubMed

    Xu, X Q

    2008-07-01

    We present gyrokinetic neoclassical simulations of tokamak plasmas with a self-consistent electric field using a fully nonlinear (full- f ) continuum code TEMPEST in a circular geometry. A set of gyrokinetic equations are discretized on a five-dimensional computational grid in phase space. The present implementation is a method of lines approach where the phase-space derivatives are discretized with finite differences, and implicit backward differencing formulas are used to advance the system in time. The fully nonlinear Boltzmann model is used for electrons. The neoclassical electric field is obtained by solving the gyrokinetic Poisson equation with self-consistent poloidal variation. With a four-dimensional (psi,theta,micro) version of the TEMPEST code, we compute the radial particle and heat fluxes, the geodesic-acoustic mode, and the development of the neoclassical electric field, which we compare with neoclassical theory using a Lorentz collision model. The present work provides a numerical scheme for self-consistently studying important dynamical aspects of neoclassical transport and electric field in toroidal magnetic fusion devices.

  11. SciDAC Center for Gyrokinetic Particle Simulation of Turbulent Transport in Burning Plasmas

    SciTech Connect

    Lin, Zhihong

    2013-12-18

    During the first year of the SciDAC gyrokinetic particle simulation (GPS) project, the GPS team (Zhihong Lin, Liu Chen, Yasutaro Nishimura, and Igor Holod) at the University of California, Irvine (UCI) studied the tokamak electron transport driven by electron temperature gradient (ETG) turbulence, and by trapped electron mode (TEM) turbulence and ion temperature gradient (ITG) turbulence with kinetic electron effects, extended our studies of ITG turbulence spreading to core-edge coupling. We have developed and optimized an elliptic solver using finite element method (FEM), which enables the implementation of advanced kinetic electron models (split-weight scheme and hybrid model) in the SciDAC GPS production code GTC. The GTC code has been ported and optimized on both scalar and vector parallel computer architectures, and is being transformed into objected-oriented style to facilitate collaborative code development. During this period, the UCI team members presented 11 invited talks at major national and international conferences, published 22 papers in peer-reviewed journals and 10 papers in conference proceedings. The UCI hosted the annual SciDAC Workshop on Plasma Turbulence sponsored by the GPS Center, 2005-2007. The workshop was attended by about fifties US and foreign researchers and financially sponsored several gradual students from MIT, Princeton University, Germany, Switzerland, and Finland. A new SciDAC postdoc, Igor Holod, has arrived at UCI to initiate global particle simulation of magnetohydrodynamics turbulence driven by energetic particle modes. The PI, Z. Lin, has been promoted to the Associate Professor with tenure at UCI.

  12. Gyrokinetic simulations in general geometry and applications to collisional damping of zonal flows

    SciTech Connect

    Lin, Z.; Hahm, T.S.; Lee, W.W.; Tang, W.M.; White, R.B.

    2000-02-15

    A fully three-dimensional gyrokinetic particle code using magnetic coordinates for general geometry has been developed and applied to the investigation of zonal flows dynamics in toroidal ion-temperature-gradient turbulence. Full torus simulation results support the important conclusion that turbulence-driven zonal flows significantly reduce the turbulent transport. Linear collisionless simulations for damping of an initial poloidal flow perturbation exhibit an asymptotic residual flow. The collisional damping of this residual causes the dependence of ion thermal transport on the ion-ion collision frequency even in regimes where the instabilities are collisionless.

  13. Nonlinear gyrokinetic simulations of the I-mode high confinement regime and comparisons with experimenta)

    NASA Astrophysics Data System (ADS)

    White, A. E.; Howard, N. T.; Creely, A. J.; Chilenski, M. A.; Greenwald, M.; Hubbard, A. E.; Hughes, J. W.; Marmar, E.; Rice, J. E.; Sierchio, J. M.; Sung, C.; Walk, J. R.; Whyte, D. G.; Mikkelsen, D. R.; Edlund, E. M.; Kung, C.; Holland, C.; Candy, J.; Petty, C. C.; Reinke, M. L.; Theiler, C.

    2015-05-01

    For the first time, nonlinear gyrokinetic simulations of I-mode plasmas are performed and compared with experiment. I-mode is a high confinement regime, featuring energy confinement similar to H-mode, but without enhanced particle and impurity particle confinement [D. G. Whyte et al., Nucl. Fusion 50, 105005 (2010)]. As a consequence of the separation between heat and particle transport, I-mode exhibits several favorable characteristics compared to H-mode. The nonlinear gyrokinetic code GYRO [J. Candy and R. E. Waltz, J Comput. Phys. 186, 545 (2003)] is used to explore the effects of E × B shear and profile stiffness in I-mode and compare with L-mode. The nonlinear GYRO simulations show that I-mode core ion temperature and electron temperature profiles are more stiff than L-mode core plasmas. Scans of the input E × B shear in GYRO simulations show that E × B shearing of turbulence is a stronger effect in the core of I-mode than L-mode. The nonlinear simulations match the observed reductions in long wavelength density fluctuation levels across the L-I transition but underestimate the reduction of long wavelength electron temperature fluctuation levels. The comparisons between experiment and gyrokinetic simulations for I-mode suggest that increased E × B shearing of turbulence combined with increased profile stiffness are responsible for the reductions in core turbulence observed in the experiment, and that I-mode resembles H-mode plasmas more than L-mode plasmas with regards to marginal stability and temperature profile stiffness.

  14. A Proposed Gyrokinetic Simulation Scheme for the Equilibrium Potential Well due to Finite Larmor Radius Effects at the Tokamak Edge

    NASA Astrophysics Data System (ADS)

    Lee, W. W.; White, Roscoe

    2016-10-01

    A novel mechanism for producing the equilibrium potential well near the edge of a tokamak has been recently proposed. Briefly, because of the difference in gyroradii between electrons and ions, an equilibrium electrostatic potential is generated in the presence of spatial inhomogeneity of the background plasma, which, in turn, produces a well associated with the radial electric field, Er, as observed at the edge of many tokamak experiments. Specifically, this theoretically predicted Er field, which can be regarded as producing a long radial wave length zonal flow, agrees well with recent experimental measurements on JET, NSTX and C-Mod. A possible verification of this new mechanism using a proposed procedure involving global gyrokinetic particle simulation codes and equilibrium MHD codes will be discussed. The approach is iteratively to decouple the transport problem from the equilibrium problem, so that each may be treated accurately, and, then couple them through parameter exchanges. DoE-Grant DE-AC02-09CH11466.

  15. Gyrokinetic Particle Simulation of Turbulent Transport in Burning Plasmas (GPS - TTBP) Final Report

    SciTech Connect

    Chame, Jacqueline

    2011-05-27

    The goal of this project is the development of the Gyrokinetic Toroidal Code (GTC) Framework and its applications to problems related to the physics of turbulence and turbulent transport in tokamaks,. The project involves physics studies, code development, noise effect mitigation, supporting computer science efforts, diagnostics and advanced visualizations, verification and validation. Its main scientific themes are mesoscale dynamics and non-locality effects on transport, the physics of secondary structures such as zonal flows, and strongly coherent wave-particle interaction phenomena at magnetic precession resonances. Special emphasis is placed on the implications of these themes for rho-star and current scalings and for the turbulent transport of momentum. GTC-TTBP also explores applications to electron thermal transport, particle transport; ITB formation and cross-cuts such as edge-core coupling, interaction of energetic particles with turbulence and neoclassical tearing mode trigger dynamics. Code development focuses on major initiatives in the development of full-f formulations and the capacity to simulate flux-driven transport. In addition to the full-f -formulation, the project includes the development of numerical collision models and methods for coarse graining in phase space. Verification is pursued by linear stability study comparisons with the FULL and HD7 codes and by benchmarking with the GKV, GYSELA and other gyrokinetic simulation codes. Validation of gyrokinetic models of ion and electron thermal transport is pursed by systematic stressing comparisons with fluctuation and transport data from the DIII-D and NSTX tokamaks. The physics and code development research programs are supported by complementary efforts in computer sciences, high performance computing, and data management.

  16. Advances in stellarator gyrokinetics

    NASA Astrophysics Data System (ADS)

    Helander, P.; Bird, T.; Jenko, F.; Kleiber, R.; Plunk, G. G.; Proll, J. H. E.; Riemann, J.; Xanthopoulos, P.

    2015-05-01

    Recent progress in the gyrokinetic theory of stellarator microinstabilities and turbulence simulations is summarized. The simulations have been carried out using two different gyrokinetic codes, the global particle-in-cell code EUTERPE and the continuum code GENE, which operates in the geometry of a flux tube or a flux surface but is local in the radial direction. Ion-temperature-gradient (ITG) and trapped-electron modes are studied and compared with their counterparts in axisymmetric tokamak geometry. Several interesting differences emerge. Because of the more complicated structure of the magnetic field, the fluctuations are much less evenly distributed over each flux surface in stellarators than in tokamaks. Instead of covering the entire outboard side of the torus, ITG turbulence is localized to narrow bands along the magnetic field in regions of unfavourable curvature, and the resulting transport depends on the normalized gyroradius ρ* even in radially local simulations. Trapped-electron modes can be significantly more stable than in typical tokamaks, because of the spatial separation of regions with trapped particles from those with bad magnetic curvature. Preliminary non-linear simulations in flux-tube geometry suggest differences in the turbulence levels in Wendelstein 7-X and a typical tokamak.

  17. Gyrokinetic GDC turbulence simulations: confirming a new instability regime in LAPD plasmas

    NASA Astrophysics Data System (ADS)

    Pueschel, M. J.; Rossi, G.; Told, D.; Terry, P. W.; Jenko, F.; Carter, T. A.

    2016-10-01

    Recent high-beta experiments at the LArge Plasma Device have found significant parallel magnetic fluctuations in the region of large pressure gradients. Linear gyrokinetic simulations show the dominant instability at these radii to be the gradient-driven drift coupling (GDC) mode, a non-textbook mode driven by pressure gradients and destabilized by the coupling of ExB and grad-B∥ drifts. Unlike in previous studies, the large parallel extent of the device allows for finite-kz versions of this instability in addition to kz = 0 . The locations of maximum linear growth match very well with experimentally observed peaks of B∥ fluctuations. Local nonlinear simulations reproduce many features of the observations fairly well, with the exception of Bperp fluctuations, for which experimental profiles suggest a source unrelated to pressure gradients. In toto, the results presented here show that turbulence and transport in these experiments are driven by the GDC instability, that important characteristics of the linear instability carry over to nonlinear simulations, and - in the context of validation - that the gyrokinetic framework performs surprisingly well far outside its typical area of application, increasing confidence in its predictive abilities. Supported by U.S. DOE.

  18. Effect of magnetic islands on profiles, flows, turbulence and transport in nonlinear gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Bañón Navarro, A.; Bardóczi, L.; Carter, T. A.; Jenko, F.; Rhodes, T. L.

    2017-03-01

    Neoclassical tearing modes have deleterious effects on plasma confinement and, if they grow large enough, they can lead to discharge termination. Therefore, they impose a major barrier in the development of operating scenarios of present-day tokamaks. Gyrokinetics offers a path toward studying multi-scale interactions with turbulence and the effect on plasma confinement. As a first step toward this goal, we have implemented static magnetic islands in nonlinear gyrokinetic simulations with the GENE code. We investigate the effect of the islands on profiles, flows, turbulence and transport and the scaling of these effects with respect to island size. We find a clear threshold island width, below which the islands have little or no effect while beyond this point the islands significantly perturb flows, increase turbulence and transport. Additionally, we study the effect of radially asymmetric islands on shear flows for the first time. We find that island induced shear flows can regulate turbulent fluctuation levels in the vicinity of the island separatrices. Throughout this work, we focus on experimentally relevant quantities, such as rms levels of density and electron temperature fluctuations, as well as amplitude and phasing of turbulence modulation. These simulations aim to provide guidelines for interpreting experimental results by comparing qualitative trends in the simulations with those obtained in tokamak experiments.

  19. Gyrokinetic Electron and Fully Kinetic Ion Particle Simulation of Collisionless Plasma Dynamics

    SciTech Connect

    Yu Lin; Xueyi Wang; Liu Chen; Zhihong Lin

    2009-08-11

    Fully kinetic-particle simulations and hybrid simulations have been utilized for decades to investigate various fundamental plasma processes, such as magnetic reconnection, fast compressional waves, and wave-particle interaction. Nevertheless, due to disparate temporal and spatial scales between electrons and ions, existing fully kinetic-particle codes have to employ either unrealistically high electron-to-ion mass ratio, me/mi, or simulation domain limited to a few or a few ten's of the ion Larmor radii, or/and time much less than the global Alfven time scale in order to accommodate available computing resources. On the other hand, in the hybrid simulation, the ions are treated as fully kinetic particles but the electrons are treated as a massless fluid. The electron kinetic effects, e.g., wave-particle resonances and finite electron Larmor radius effects, are completely missing. Important physics, such as the electron transit time damping of fast compressional waves or the triggering mechanism of magnetic reconnection in collisionless plasmas is absent in the hybrid codes. Motivated by these considerations and noting that dynamics of interest to us has frequencies lower than the electron gyrofrequency, we planned to develop an innovative particle simulation model, gyrokinetic (GK) electrons and fully kinetic (FK) ions. In the GK-electron and FK-ion (GKe/FKi) particle simulation model, the rapid electron cyclotron motion is removed, while keeping finite electron Larmor radii, realistic me/mi ratio, wave-particle interactions, and off-diagonal components of electron pressure tensor. The computation power can thus be significantly improved over that of the full-particle codes. As planned in the project DE-FG02-05ER54826, we have finished the development of the new GK-electron and FK-ion scheme, finished its benchmark for a uniform plasma in 1-D, 2-D, and 3-D systems against linear waves obtained from analytical theories, and carried out a further convergence test

  20. Comprehensive comparisons of geodesic acoustic mode characteristics and dynamics between Tore Supra experiments and gyrokinetic simulations

    SciTech Connect

    Storelli, A. Vermare, L.; Hennequin, P.; Gürcan, Ö. D.; Singh, Rameswar; Morel, P.; Dif-Pradalier, G.; Sarazin, Y.; Garbet, X.; Grandgirard, V.; Ghendrih, P.; Görler, T.

    2015-06-15

    In a dedicated collisionality scan in Tore Supra, the geodesic acoustic mode (GAM) is detected and identified with the Doppler backscattering technique. Observations are compared to the results of a simulation with the gyrokinetic code GYSELA. We found that the GAM frequency in experiments is lower than predicted by simulation and theory. Moreover, the disagreement is higher in the low collisionality scenario. Bursts of non harmonic GAM oscillations have been characterized with filtering techniques, such as the Hilbert-Huang transform. When comparing this dynamical behaviour between experiments and simulation, the probability density function of GAM amplitude and the burst autocorrelation time are found to be remarkably similar. In the simulation, where the radial profile of GAM frequency is continuous, we observed a phenomenon of radial phase mixing of the GAM oscillations, which could influence the burst autocorrelation time.

  1. Gyrokinetic ion/fluid electron simulation of nonlinear evolution of multiple Reverse Shear Alfven Eigenmodes

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Fu, Guo-Yong; Parker, Scott

    2016-10-01

    We report simulation of simultaneous excitation of multiple Reverse Shear Alfven eigenmodes in DIII-D plasmas (discharge #142111), using the gyrokinetic ion/fluid electron hybrid model of GEM. Thermal ions and beam ions are gyrokinetic, electrons are fluid with finite-mass correction in the Ohm's law. The vorticity equation is solved instead of the quasi-neutrality condition. This improves numerical stability. We extend previous single-n nonlinear simulation to simultaneous excitation of toroidal modes with n = 0 and 2 < n < 15 . Both the zonal n = 0 mode and the n = 8 mode are observed to be force driven by the linearly dominant n = 4 mode coupled to itself, with a growth rate twice that of the n = 4 mode. The zonal mode (including the surface averaged ϕ and A∥) significantly reduces the initial saturation level of the n = 4 mode. Evolution of all the other modes are also dominated by nonlinear coupling to the n = 4 mode. The mechanism of zonal structure generation will be examined by comparing various terms in the vorticity equation, including the Reynolds stress, the magnetic stress and the beam ion nonlinear effect.

  2. Unlike-particle collision operator for gyrokinetic particle simulations

    SciTech Connect

    Kolesnikov, R.A.; Wang, W.X.; Hinton, F.L.

    2010-08-01

    Plasmas in modern tokamak experiments contain a significant fraction of impurity ion species in addition to main deuterium background. A new unlike-particle collision operator for {delta}f particle simulation has been developed to self-consistently study the non-local effects of impurities on neoclassical transport in toroidal plasmas. A new algorithm for simulation of cross-collisions between different ion species includes test-particle and conserving field-particle operators. The field-particle operator is designed to enforce conservation of number, momentum and energy. It was shown that the new operator correctly simulates the thermal equilibration of different plasma components. It was verified that the ambipolar radial electric field reaches steady state when the total radial guiding center particle current vanishes.

  3. Monte-Carlo finite elements gyrokinetic simulations of Alfven modes in tokamaks

    NASA Astrophysics Data System (ADS)

    Bottino, Alberto; Biancalani, Alessandro; Palermo, Francesco; Tronko, Natalia

    2016-10-01

    The global gyrokinetic code ORB5 can simultaneously include electromagnetic perturbations, general ideal MHD axisymmetric equilibria, zonal-flow preserving sources, collisions, and the ability to solve the full core plasma including the magnetic axis. In this work, a Monte Carlo Particle In Cell Finite Element model, starting from a gyrokinetic discrete Lagrangian, is derived and implemented into the ORB5 code. The variations of the Lagrangian are used to obtain the time continuous equations of motion for the particles and the Finite Element approximation of the field equations. The Noether theorem for the semi-discretised system, implies a certain number of conservation properties for the final set of equation. Linear and nonlinear results, concerning Alfvén instabilities, in the presence of an energetic particle population, and microinstabilities, such as electromagnetic ion temperature gradient (ITG) driven modes and kinetic ballooning modes (KBM), will be presented and discussed. Due to losses of energetic particles, Alfvén instabilities can not only affect plasma stability and damage the walls, but also strongly impact the heating efficiency of a fusion reactor and ultimately the possibility of reaching ignition.

  4. Gyrokinetics Simulation of Energetic Particle Turbulence and Transport

    SciTech Connect

    Diamond, Patrick H.

    2011-09-21

    Progress in research during this year elucidated the physics of precession resonance and its interaction with radial scattering to form phase space density granulations. Momentum theorems for drift wave-zonal flow systems involving precession resonance were derived. These are directly generalizable to energetic particle modes. A novel nonlinear, subcritical growth mechanism was identified, which has now been verified by simulation. These results strengthen the foundation of our understanding of transport in burning plasmas

  5. Interaction between neoclassical effects and ion temperature gradient turbulence in gradient- and flux-driven gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Oberparleiter, M.; Jenko, F.; Told, D.; Doerk, H.; Görler, T.

    2016-04-01

    Neoclassical and turbulent transport in tokamaks has been studied extensively over the past decades, but their possible interaction remains largely an open question. The two are only truly independent if the length scales governing each of them are sufficiently separate, i.e., if the ratio ρ* between ion gyroradius and the pressure gradient scale length is small. This is not the case in particularly interesting regions such as transport barriers. Global simulations of a collisional ion-temperature-gradient-driven microturbulence performed with the nonlinear global gyrokinetic code Gene are presented. In particular, comparisons are made between systems with and without neoclassical effects. In fixed-gradient simulations, the modified radial electric field is shown to alter the zonal flow pattern such that a significant increase in turbulent transport is observed for ρ*≳1 /300 . Furthermore, the dependency of the flux on the collisionality changes. In simulations with fixed power input, we find that the presence of neoclassical effects decreases the frequency and amplitude of intermittent turbulent transport bursts (avalanches) and thus plays an important role for the self-organisation behaviour.

  6. GYROKINETIC PARTICLE SIMULATION OF TURBULENT TRANSPORT IN BURNING PLASMAS

    SciTech Connect

    Horton, Claude Wendell

    2014-06-10

    The SciDAC project at the IFS advanced the state of high performance computing for turbulent structures and turbulent transport. The team project with Prof Zhihong Lin [PI] at Univ California Irvine produced new understanding of the turbulent electron transport. The simulations were performed at the Texas Advanced Computer Center TACC and the NERSC facility by Wendell Horton, Lee Leonard and the IFS Graduate Students working in that group. The research included a Validation of the electron turbulent transport code using the data from a steady state university experiment at the University of Columbia in which detailed probe measurements of the turbulence in steady state were used for wide range of temperature gradients to compare with the simulation data. These results were published in a joint paper with Texas graduate student Dr. Xiangrong Fu using the work in his PhD dissertation. X.R. Fu, W. Horton, Y. Xiao, Z. Lin, A.K. Sen and V. Sokolov, “Validation of electron Temperature gradient turbulence in the Columbia Linear Machine, Phys. Plasmas 19, 032303 (2012).

  7. Fully Nonlinear Edge Gyrokinetic Simulations of Kinetic Geodesic-Acoustic Modes and Boundary Flows

    SciTech Connect

    Xu, X Q; Belli, E; Bodi, K; Candy, J; Chang, C S; Cohen, B I; Cohen, R H; Colella, P; Dimits, A M; Dorr, M R; Gao, Z; Hittinger, J A; Ko, S; Krasheninnikov, S; McKee, G R; Nevins, W M; Rognlien, T D; Snyder, P B; Suh, J; Umansky, M V

    2008-09-18

    We present edge gyrokinetic neoclassical simulations of tokamak plasmas using the fully nonlinear (full-f) continuum code TEMPEST. A nonlinear Boltzmann model is used for the electrons. The electric field is obtained by solving the 2D gyrokinetic Poisson Equation. We demonstrate the following: (1) High harmonic resonances (n > 2) significantly enhance geodesic-acoustic mode (GAM) damping at high-q (tokamak safety factor), and are necessary to explain both the damping observed in our TEMPEST q-scans and experimental measurements of the scaling of the GAM amplitude with edge q{sub 95} in the absence of obvious evidence that there is a strong q dependence of the turbulent drive and damping of the GAM. (2) The kinetic GAM exists in the edge for steep density and temperature gradients in the form of outgoing waves, its radial scale is set by the ion temperature profile, and ion temperature inhomogeneity is necessary for GAM radial propagation. (3) The development of the neoclassical electric field evolves through different phases of relaxation, including GAMs, their radial propagation, and their long-time collisional decay. (4) Natural consequences of orbits in the pedestal and scrape-off layer region in divertor geometry are substantial non-Maxwellian ion distributions and flow characteristics qualitatively like those observed in experiments.

  8. Gyrokinetic Particle Simulation of Turbulent Transport in Burning Plasmas

    SciTech Connect

    Ma, Kwan-Liu

    2011-12-21

    In this project, we have developed techniques for visualizing large-scale time-varying multivariate particle and field data produced by the GPS_TTBP team. Our basic approach to particle data visualization is to provide the user with an intuitive interactive interface for exploring the data. We have designed a multivariate filtering interface for scientists to effortlessly isolate those particles of interest for revealing structures in densely packed particles as well as the temporal behaviors of selected particles. With such a visualization system, scientists on the GPS-TTBP project can validate known relationships and temporal trends, and possibly gain new insights in their simulations. We have tested the system using over several millions of particles on a single PC. We will also need to address the scalability of the system to handle billions of particles using a cluster of PCs. To visualize the field data, we choose to use direct volume rendering. Because the data provided by PPPL is on a curvilinear mesh, several processing steps have to be taken. The mesh is curvilinear in nature, following the shape of a deformed torus. Additionally, in order to properly interpolate between the given slices we cannot use simple linear interpolation in Cartesian space but instead have to interpolate along the magnetic field lines given to us by the scientists. With these limitations, building a system that can provide an accurate visualization of the dataset is quite a challenge to overcome. In the end we use a combination of deformation methods such as deformation textures in order to fit a normal torus into their deformed torus, allowing us to store the data in toroidal coordinates in order to take advantage of modern GPUs to perform the interpolation along the field lines for us. The resulting new rendering capability produces visualizations at a quality and detail level previously not available to the scientists at the PPPL. In summary, in this project we have

  9. Gyrokinetic Particle Simulation of Turbulent Transport in Burning Plasmas

    SciTech Connect

    Diamond, P.H.; Lin, Z.; Wang, W.; Horton, W.; Klasky, S.; Decyk, V.; Ma, K.-L.; Chames, J.; Adams, M.

    2011-09-21

    The three-year project GPS-TTBP resulted in over 152 publications and 135 presentations. This summary focuses on the scientific progress made by the project team. A major focus of the project was on the physics intrinsic rotation in tokamaks. Progress included the first ever flux driven study of net intrinsic spin-up, mediated by boundary effects (in collaboration with CPES), detailed studies of the microphysics origins of the Rice scaling, comparative studies of symmetry breaking mechanisms, a pioneering study of intrinsic torque driven by trapped electron modes, and studies of intrinsic rotation generation as a thermodynamic engine. Validation studies were performed with C-Mod, DIII-D and CSDX. This work resulted in very successful completion of the FY2010 Theory Milestone Activity for OFES, and several prominent papers of the 2008 and 2010 IAEA Conferences. A second major focus was on the relation between zonal flow formation and transport non-locality. This culminated in the discovery of the ExB staircase - a conceptually new phenomenon. This also makes useful interdisciplinary contact with the physics of the PV staircase, well-known in oceans and atmospheres. A third topic where progress was made was in the simulation and theory of turbulence spreading. This work, now well cited, is important for understanding the dynamics of non-locality in turbulent transport. Progress was made in studies of conjectured non-diffusive transport in trapped electron turbulence. Pioneering studies of ITB formation, coupling to intrinsic rotation and hysteresis were completed. These results may be especially significant for future ITER operation. All told, the physics per dollar performance of this project was quite good. The intense focus was beneficial and SciDAC resources were essential to its success.

  10. Gyrokinetic simulations of an electron temperature gradient turbulence driven current in tokamak plasmas

    NASA Astrophysics Data System (ADS)

    Yi, Sumin; Jhang, Hogun; Kwon, J. M.

    2016-10-01

    We report the results of a gyrokinetic simulation study elucidating the characteristics of the current driven by electron temperature gradient (ETG) turbulence in toroidal geometry. We examined the amount of the ETG turbulence-driven current for different turbulence levels, which were obtained by varying the relative electron gyroradius ρ* = ρe/a. Simulations show that the amount of the ETG turbulence-driven current increases with ρ* due to the gyro-Bohm scaling of turbulence intensity. A perturbation of the equilibrium q-profile by the ETG turbulence-driven current becomes noticeable when ρ* > 1/4000. Even in a small ρ* case, the proportional relation between the ETG turbulence-driven current and turbulence intensity suggests that a considerable intrinsic current can be driven inside an edge pedestal where a steep gradient of the electron temperature profile can excite ETG turbulence in a narrow region.

  11. Whole-volume integrated gyrokinetic simulation of plasma turbulence in realistic diverted-tokamak geometry

    SciTech Connect

    Chang, C S; Ku, Seung-Hoe; Diamond, P. H.; Adams, Mark; Tchoua, Roselyne B; Chen, Yang; Cummings, J.; D'Azevedo, Ed F; Dif-Pradalier, Guilhem; Ethier, Stephane; Greengard, Leslie; Hahm, Taik Soo; Hinton, Fred; Keyes, David E; Klasky, Scott A; Lin, Z.; Lofstead, J.; Park, G.; Podhorszki, Norbert; Schwan, Karsten; Shoshani, A.; Silver, D.; Wolf, M.; Worley, Patrick H; Zorin, Denis

    2009-01-01

    Performance prediction for ITER is based upon the ubiquitous experimental observation that the plasma energy confinement in the device core is strongly coupled to the edge confinement for an unknown reason. The coupling time-scale is much shorter than the plasma transport time-scale. In order to understand this critical observation, a multi-scale turbulence-neoclassical simulation of integrated edge-core plasma in a realistic diverted geometry is a necessity, but has been a formidable task. Thanks to the recent development in high performance computing, we have succeeded in the integrated multiscale gyrokinetic simulation of the ion-temperature-gradient driven turbulence in realistic diverted tokamak geometry for the first time. It is found that modification of the self-organized criticality in the core plasma by nonlocal core-edge coupling of ITG turbulence can be responsible for the core-edge confinement coupling.

  12. Gyrokinetic simulations of solar wind turbulence from ion to electron scales.

    PubMed

    Howes, G G; TenBarge, J M; Dorland, W; Quataert, E; Schekochihin, A A; Numata, R; Tatsuno, T

    2011-07-15

    A three-dimensional, nonlinear gyrokinetic simulation of plasma turbulence resolving scales from the ion to electron gyroradius with a realistic mass ratio is presented, where all damping is provided by resolved physical mechanisms. The resulting energy spectra are quantitatively consistent with a magnetic power spectrum scaling of k(-2.8) as observed in in situ spacecraft measurements of the "dissipation range" of solar wind turbulence. Despite the strongly nonlinear nature of the turbulence, the linear kinetic Alfvén wave mode quantitatively describes the polarization of the turbulent fluctuations. The collisional ion heating is measured at subion-Larmor radius scales, which provides evidence of the ion entropy cascade in an electromagnetic turbulence simulation.

  13. Gyrokinetic simulation of I-mode C-Mod pedestal using GENE

    NASA Astrophysics Data System (ADS)

    Liu, Xing; David, H.; Kotschenreuther, M.; Mahajan, S.; Huges, J.; Hubbard, A.; Valanju, P.

    2016-10-01

    Naturally stable to ELMs, and with widths larger than EPED predictions, the I-modes are an excellent laboratory for investigating the role of drift microinstabilities in pedestal formation since I-mode pedestal are not ``limited'' by MHD instabilities-Peeling Ballooning or the Kinetic Ballooning. Because the Weakly Coherent Mode (WCM) is shown to be correlated, primarily, to particle transport, the pedestal heat transport, in some sense, must be controlled by drift-type modes. We present here a study based on gyrokinetic simulations (using GENE) to model heat transport in the I-mode pedestals in C-Mod. Nonlinear ETG simulations, found to be streamer-dominated, can match experimental heat flux with profile adjustment well within experimental error bars. The ETG simulations reveal very notable fine-scale structure (in the parallel direction) of the eigenfunctions in both linear and nonlinear simulations. Simulations, varying impurity level (Zeff) and temperature and density profiles (within experimental error bars), are used to probe the sensitivity of ETG heat transport to the most important input parameters. Efforts to identify an instability corresponding to the WCM will also be discussed. Work supported by USDOE Grant DE-FG02-04ER54742.

  14. Continuum Gyrokinetic Simulations of Turbulence in Open-Field-Line Plasmas

    NASA Astrophysics Data System (ADS)

    Shi, E. L.; Hammett, G. W.; Stoltzfus-Dueck, T.; Hakim, A.

    2016-10-01

    We have performed our first 3D2V gyrokinetic simulations of electrostatic plasma turbulence in open-field-line geometries using the full-F discontinuous-Galerkin code Gkeyll. These simulations include the basic elements of a scrape-off layer: localized sources to model plasma outflow from the core, cross-field turbulent transport, parallel flow along magnetic field lines, and parallel losses at the limiter or divertor with sheath boundary conditions. The set of boundary conditions used in our model allows currents to flow through the walls and satisfies energy conservation. In addition to details of our numerical approach, we will present results from flux-tube simulations of devices containing straight-field lines (such as LAPD) and helical-field-lines (such as the TORPEX simple magnetized torus). Preliminary results show turbulent fluctuation levels similar to fluid simulations, which are comparable to the observed fluctuation level in LAPD but somewhat smaller than observed in TORPEX. This research was supported by the Max-Planck/Princeton Center for Plasma Physics, the SciDAC Center for the Study of Plasma Microturbulence, and U.S. DOE contract DE-AC02-09CH11466.

  15. Construction of reduced transport model by gyro-kinetic simulation with kinetic electrons in helical plasmas

    NASA Astrophysics Data System (ADS)

    Toda, S.; Nakata, M.; Nunami, M.; Ishizawa, A.; Watanabe, T.-H.; Sugama, H.

    2016-10-01

    A reduced model of the turbulent ion heat diffusivity is proposed by the gyrokinetic simulation code (GKV-X) with the adiabatic electrons for the high-Ti Large Helical Device discharge. The plasma parameter region of the short poloidal wavelength is studied, where the ion temperature gradient mode becomes unstable. The ion heat diffusivity by the nonlinear simulation with the kinetic electrons is found to be several times larger than the simulation results using the adiabatic electrons in the radial region 0.46 <= r / a <= 0.80 . The electromagnetic contribution is about a several percent in the ion energy flux. The model of the turbulent diffusivity is derived as the function of the squared electrostatic potential fluctuation and the squared zonal flow potential. Next, the squared electrostatic potential fluctuation is approximated with the mixing length estimate. The squared zonal flow potential fluctuation is shown as the linear zonal flow response function. The reduced model of the turbulent diffusivity is derived as the function of the physical parameters by the linear GKV-X simulation with the kinetic electrons. This reduced model is applied to the transport code with the same procedure as.

  16. Development of a fully implicit particle-in-cell scheme for gyrokinetic electromagnetic turbulence simulation in XGC1

    NASA Astrophysics Data System (ADS)

    Ku, Seung-Hoe; Hager, R.; Chang, C. S.; Chacon, L.; Chen, G.; EPSI Team

    2016-10-01

    The cancelation problem has been a long-standing issue for long wavelengths modes in electromagnetic gyrokinetic PIC simulations in toroidal geometry. As an attempt of resolving this issue, we implemented a fully implicit time integration scheme in the full-f, gyrokinetic PIC code XGC1. The new scheme - based on the implicit Vlasov-Darwin PIC algorithm by G. Chen and L. Chacon - can potentially resolve cancelation problem. The time advance for the field and the particle equations is space-time-centered, with particle sub-cycling. The resulting system of equations is solved by a Picard iteration solver with fixed-point accelerator. The algorithm is implemented in the parallel velocity formalism instead of the canonical parallel momentum formalism. XGC1 specializes in simulating the tokamak edge plasma with magnetic separatrix geometry. A fully implicit scheme could be a way to accurate and efficient gyrokinetic simulations. We will test if this numerical scheme overcomes the cancelation problem, and reproduces the dispersion relation of Alfven waves and tearing modes in cylindrical geometry. Funded by US DOE FES and ASCR, and computing resources provided by OLCF through ALCC.

  17. Center for Gyrokinetic/MHD Hybrid Simulation of Energetic Particle Physics in Toroidal Plasmas (CSEPP). Final report

    SciTech Connect

    Chen, Yang

    2012-03-07

    At Colorado University-Boulder the primary task is to extend our gyrokinetic Particle-in-Cell simulation of tokamak micro-turbulence and transport to the area of energetic particle physics. We have implemented a gyrokinetic ion/massless fluid electron hybrid model in the global {delta} f-PIC code GEM, and benchmarked the code with analytic results on the thermal ion radiative damping rate of Toroidal Alfven Eigenmodes (TAE) and with mode frequency and spatial structure from eigenmode analysis. We also performed nonlinear simulations of both a single-n mode (n is the toroidal mode number) and multiple-n modes, and in the case of single-n, benchmarked the code on the saturation amplitude vs. particle collision rate with analytical theory. Most simulations use the f method for both ions species, but we have explored the full-f method for energetic particles in cases where the burst amplitude of the excited instabilities is large as to cause significant re-distribution or loss of the energetic particles. We used the hybrid model to study the stability of high-n TAEs in ITER. Our simulations show that the most unstable modes in ITER lie in the rage of 10 < n < 20. Thermal ion pressure effect and alpha particles non-perturbative effect are important in determining the mode radial location and stability threshold. The thermal ion Landau damping rate and radiative damping rate from the simulations are compared with analytical estimates. The thermal ion Landau damping is the dominant damping mechanism. Plasma elongation has a strong stabilizing effect on the alpha driven TAEs. The central alpha particle pressure threshold for the most unstable n=15 mode is about {beta}{sub {alpha}}(0) = 0.7% for the fully shaped ITER equilibrium. We also carried nonlinear simulations of the most unstable n = 15 mode and found that the saturation amplitude for the nominal ITER discharge is too low to cause large redistribution or loss of alpha particles. To include kinetic electron effects

  18. Gyrokinetic Particle Simulation of Compressible Electromagnetic Turbulence in High-β Plasmas

    SciTech Connect

    Lin, Zhihong

    2014-03-13

    Supported by this award, the PI and his research group at the University of California, Irvine (UCI) have carried out computational and theoretical studies of instability, turbulence, and transport in laboratory and space plasmas. Several massively parallel, gyrokinetic particle simulation codes have been developed to study electromagnetic turbulence in space and laboratory plasmas. In space plasma projects, the simulation codes have been successfully applied to study the spectral cascade and plasma heating in kinetic Alfven wave turbulence, the linear and nonlinear properties of compressible modes including mirror instability and drift compressional mode, and the stability of the current sheet instabilities with finite guide field in the context of collisionless magnetic reconnection. The research results have been published in 25 journal papers and presented at many national and international conferences. Reprints of publications, source codes, and other research-related information are also available to general public on the PI’s webpage (http://phoenix.ps.uci.edu/zlin/). Two PhD theses in space plasma physics are highlighted in this report.

  19. Bounce-Averaged Gyrokinetic Simulation of Current-Collection Feedback in a Laboratory Magnetosphere

    NASA Astrophysics Data System (ADS)

    Roberts, T. M.; Garnier, D.; Kesner, J.; Mauel, M. E.

    2014-10-01

    A self-consistent, nonlinear simulation of interchange dynamics including the bounce-averaged gyro-kinetics of trapped electrons was previously used to understand frequency sweeping and the turbulent cascades observed in dipole-confined plasmas. Through adjustment of the particle and heat sources this code reproduces dynamics that resemble the turbulence measured experimentally, both in spectral power-law trends and in the onset of a steepened density profile. Time stepping is performed in an explicit leap-frog manner and a flux-corrected transport algorithm is implemented. In this presentation, we discuss the physics and numerical methods of the simulations as well as plans for including the effects of a biasing electrode which can collect or inject electrons. By varying this source/sink of electrons at the electrode location based on the potential fluctuations occurring elsewhere, we study the effects of current-collection feedback to compare to recent experiments observed to regulate interchange turbulence. Supported by NSF-DOE Partnership for Plasma Science and DOE Grant DE-FG02-00ER54585 and NSF Award PHY-1201896.

  20. Stellarator Microinstability and Turbulence Simulations Using Gyrofluid (GryfX) and Gyrokinetic (GS2) Codes

    NASA Astrophysics Data System (ADS)

    Martin, Mike; Landreman, Matt; Mandell, Noah; Dorland, William

    2016-10-01

    GryfX is a delta-f code that evolves the gyrofluid set of equations using sophisticated nonlinear closures, with the option to evolve zonal flows (ky =0) kinetically. Since fluid models require less memory to store than a kinetic model, GryfX is ideally suited and thus written to run on a Graphics Processing Unit (GPU), yielding about a 1,200 times performance advantage over GS2. Here we present the first stellarator simulations using GryfX. Results compare linear growth rates of the Ion Temperature Gradient (ITG) mode between GryfX and the gyrokinetic code, GS2, using stellarator geometries from the National Compact Stellarator Experiment (NCSX) and Wendelstein 7-X (W7X). Strong agreement of <10% for maximum growth rates is observed between GS2 and GryfX for temperature gradients away from marginal stability for both NCSX and W7X geometries. Nonlinear stellarator results using GS2/GryfX are also presented.

  1. The direct method for gyrokinetic simulation with kinetic electrons and magnetic perturbations

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Parker, Scott

    2016-10-01

    Over the past fifteen years we have developed two Particle-in-Cell (PIC) algorithms for gyrokinetic simulation of tokamak plasmas with kinetic electrons and magnetic perturbations. The first, called the Direct Method, uses an adjustable split-weight scheme and a control-variate method to properly handle the ``cancellation problem''. The second algorithm is the Closure Scheme, which solves the vorticity equation and the generalized Ohm's law, closing with an electron pressure calculated from delta-f PIC electrons. The extention of the Direct Method to handle low-n (long wavelength) fluctuations will be discussed. We will explain the algorithm, describe the low-n geometrical implementation, and present numerical observations in applying the Direct Method to various waves, including shear Alfven waves, ITGs and the n = 1 tearing mode. These observations suggest that, whereas the cancellation problem appears to be unavoidable and can be solved by the controlled variate method, the split-weight scheme is primarily a technique for numerical stability, and can probably be replaced by other techniques (such as the mixed-variable approach.

  2. Comparative study between ion-scale turbulence measurements and gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Lee, W.; Ko, S. H.; Choi, M. J.; Ko, W. H.; Lee, K. D.; Leem, J.; Yun, G. S.; Park, H. K.; Wang, W. X.; Budny, R. V.; Park, Y. S.; Luhmann, N. C., Jr.; Kim, K. W.; Kstar Team

    2016-10-01

    Ion gyroscale density fluctuations were measured with a microwave imaging reflectometer (MIR) in neutral beam injected L-mode plasmas on KSTAR. The spatial and temporal characteristic scales of the measured fluctuations were studied by comparing with the local equilibrium parameters relevant to the ion-scale turbulence. Linear and nonlinear gyrokinetic simulations predicted unstable modes with poloidal wavenumbers of 3 cm-1 (or kθρs 0.4) and the wavenumbers were also identified from the measured fluctuations. The poloidal wavenumber can be derived from the measured mode frequency and poloidal velocity. The dominant mode frequency and poloidal velocity were obtained from cross correlations among 16 poloidal channels. Both the mode frequency and poloidal velocity mostly are primarily due to the E x B flow velocity in fast rotating plasmas with neutral beam injection. Work supported by NRF Korea under Grant Number NRF-2014M1A7A1A03029865 and Korean Ministry of Science, ICT, and Future Planning under the KSTAR project contract.

  3. Three-dimensional gyrokinetic simulation of the relaxation of a magnetized temperature filament

    SciTech Connect

    Sydora, R. D.; Morales, G. J.; Maggs, J. E.; Van Compernolle, B.

    2015-10-15

    An electromagnetic, 3D gyrokinetic particle code is used to study the relaxation of a magnetized electron temperature filament embedded in a large, uniform plasma of lower temperature. The study provides insight into the role played by unstable drift-Alfvén waves observed in a basic electron heat transport experiment [D. C. Pace et al., Phys. Plasmas 15, 122304 (2008)] in which anomalous cross-field transport has been documented. The simulation exhibits the early growth of temperature-gradient-driven, drift-Alfvén fluctuations that closely match the eigenmodes predicted by linear theory. At the onset of saturation, the unstable fluctuations display a spiral spatial pattern, similar to that observed in the laboratory, which causes the rearrangement of the temperature profile. After saturation of the linear instability, the system exhibits a markedly different behavior depending on the inclusion in the computation of modes without variation along the magnetic field, i.e., k{sub z} = 0. In their absence, the initial filament evolves into a broadened temperature profile, self-consistent with undamped, finite amplitude drift-Alfvén waves. But the inclusion of k{sub z} = 0 modes causes the destruction of the filament and damping of the drift-Alfvén modes leading to a final state consisting of undamped convective cells and multiple, smaller-scale filaments.

  4. Collisional Ion and Electron Scale Gyrokinetic Simulations in the Tokamak Pedestal

    NASA Astrophysics Data System (ADS)

    Belli, E. A.; Candy, J.; Snyder, P. B.

    2016-10-01

    A new gyrokinetic solver, CGYRO, has been developed for precise studies of high collisionality regimes, such as the H-mode pedestal and L-mode edge. Building on GYRO and NEO, CGYRO uses the same velocity-space coordinates as NEO to optimize the accuracy of the collision dynamics and allow for advanced operators beyond the standard Lorentz pitch-angle scattering model. These advanced operators include energy diffusion and finite-FLR collisional effects. The code is optimized for multiscale (coupled electron and ion turbulence scales) simulations, employing a new spatial discretization and array distribution scheme that targets scalability on next-generation (exascale) HPC systems. In this work, CGYRO is used to study the complex spectrum of modes in the pedestal region. The onset of the linear KBM with full collisional effects is assessed to develop an improved KBM/RBM model for EPED. The analysis is extended to high k to explore the role of electron-scale (ETG-range) physics. Comparisons with new analytic collisional theories are made. Inclusion of sonic toroidal rotation (including full centrifugal effects) for studies including heavy wall impurities is also reported. Work supported in part by the US DOE under DE-FC02-06ER54873 and DE-FC02-08ER54963.

  5. A new hybrid-Lagrangian numerical scheme for gyrokinetic simulation of tokamak edge plasma

    SciTech Connect

    Ku, S.; Hager, R.; Chang, C.S.; Kwon, J.M.; Parker, S.E.

    2016-06-15

    In order to enable kinetic simulation of non-thermal edge plasmas at a reduced computational cost, a new hybrid-Lagrangian δf scheme has been developed that utilizes the phase space grid in addition to the usual marker particles, taking advantage of the computational strengths from both sides. The new scheme splits the particle distribution function of a kinetic equation into two parts. Marker particles contain the fast space-time varying, δf, part of the distribution function and the coarse-grained phase-space grid contains the slow space-time varying part. The coarse-grained phase-space grid reduces the memory-requirement and the computing cost, while the marker particles provide scalable computing ability for the fine-grained physics. Weights of the marker particles are determined by a direct weight evolution equation instead of the differential form weight evolution equations that the conventional delta-f schemes use. The particle weight can be slowly transferred to the phase space grid, thereby reducing the growth of the particle weights. The non-Lagrangian part of the kinetic equation – e.g., collision operation, ionization, charge exchange, heat-source, radiative cooling, and others – can be operated directly on the phase space grid. Deviation of the particle distribution function on the velocity grid from a Maxwellian distribution function – driven by ionization, charge exchange and wall loss – is allowed to be arbitrarily large. The numerical scheme is implemented in the gyrokinetic particle code XGC1, which specializes in simulating the tokamak edge plasma that crosses the magnetic separatrix and is in contact with the material wall.

  6. A new hybrid-Lagrangian numerical scheme for gyrokinetic simulation of tokamak edge plasma

    SciTech Connect

    Ku, S.; Hager, R.; Chang, C. S.; Kwon, J. M.; Parker, S. E.

    2016-06-01

    In order to enable kinetic simulation of non-thermal edge plasmas at a reduced computational cost, a new hybrid-Lagrangian δf scheme has been developed that utilizes the phase space grid in addition to the usual marker particles, taking advantage of the computational strengths from both sides. The new scheme splits the particle distribution function of a kinetic equation into two parts. Marker particles contain the fast space-time varying, δf, part of the distribution function and the coarse-grained phase-space grid contains the slow space-time varying part. The coarse-grained phase-space grid reduces the memory-requirement and the computing cost, while the marker particles provide scalable computing ability for the fine-grained physics. Weights of the marker particles are determined by a direct weight evolution equation instead of the differential form weight evolution equations that the conventional delta-f schemes use. The particle weight can be slowly transferred to the phase space grid, thereby reducing the growth of the particle weights. The non-Lagrangian part of the kinetic equation – e.g., collision operation, ionization, charge exchange, heat-source, radiative cooling, and others – can be operated directly on the phase space grid. Deviation of the particle distribution function on the velocity grid from a Maxwellian distribution function – driven by ionization, charge exchange and wall loss – is allowed to be arbitrarily large. The numerical scheme is implemented in the gyrokinetic particle code XGC1, which specializes in simulating the tokamak edge plasma that crosses the magnetic separatrix and is in contact with the material wall.

  7. Multispecies density peaking in gyrokinetic turbulence simulations of low collisionality Alcator C-Mod plasmas

    SciTech Connect

    Mikkelsen, D. R. Bitter, M.; Delgado-Aparicio, L.; Hill, K. W.; Greenwald, M.; Howard, N. T.; Hughes, J. W.; Rice, J. E.; Reinke, M. L.; Podpaly, Y.; Ma, Y.; Candy, J.; Waltz, R. E.

    2015-06-15

    Peaked density profiles in low-collisionality AUG and JET H-mode plasmas are probably caused by a turbulently driven particle pinch, and Alcator C-Mod experiments confirmed that collisionality is a critical parameter. Density peaking in reactors could produce a number of important effects, some beneficial, such as enhanced fusion power and transport of fuel ions from the edge to the core, while others are undesirable, such as lower beta limits, reduced radiation from the plasma edge, and consequently higher divertor heat loads. Fundamental understanding of the pinch will enable planning to optimize these impacts. We show that density peaking is predicted by nonlinear gyrokinetic turbulence simulations based on measured profile data from low collisionality H-mode plasma in Alcator C-Mod. Multiple ion species are included to determine whether hydrogenic density peaking has an isotope dependence or is influenced by typical levels of low-Z impurities, and whether impurity density peaking depends on the species. We find that the deuterium density profile is slightly more peaked than that of hydrogen, and that experimentally relevant levels of boron have no appreciable effect on hydrogenic density peaking. The ratio of density at r/a = 0.44 to that at r/a = 0.74 is 1.2 for the majority D and minority H ions (and for electrons), and increases with impurity Z: 1.1 for helium, 1.15 for boron, 1.3 for neon, 1.4 for argon, and 1.5 for molybdenum. The ion temperature profile is varied to match better the predicted heat flux with the experimental transport analysis, but the resulting factor of two change in heat transport has only a weak effect on the predicted density peaking.

  8. Verification of gyrokinetic particle simulation of current-driven instability in fusion plasmas. III. Collisionless tearing mode

    SciTech Connect

    Liu, Dongjian; Bao, Jian; Han, Tao; Wang, Jiaqi; Lin, Zhihong

    2016-02-15

    A finite-mass electron fluid model for low frequency electromagnetic fluctuations, particularly the collisionless tearing mode, has been implemented in the gyrokinetic toroidal code. Using this fluid model, linear properties of the collisionless tearing mode have been verified. Simulations verify that the linear growth rate of the single collisionless tearing mode is proportional to D{sub e}{sup 2}, where D{sub e} is the electron skin depth. On the other hand, the growth rate of a double tearing mode is proportional to D{sub e} in the parameter regime of fusion plasmas.

  9. Generalized gyrokinetics

    SciTech Connect

    Bernstein, I.B.; Catto, P.J.

    1984-05-01

    A nonlinear gyrokinetic formalism is developed which permits mean velocities comparable to thermal speeds in arbitrary magnetic field geometry. The theory is fully electromagnetic and does not employ an eikonal ansatz. The freedom in the theory is exploited to display simply the connection with ideal magnetohydrodynamics.

  10. Global approach to the spectral problem of microinstabilities in tokamak plasmas using a gyrokinetic model

    NASA Astrophysics Data System (ADS)

    Brunner, S.; Fivaz, M.; Tran, T. M.; Vaclavik, J.

    1998-11-01

    A solution to the full two-dimensional eigenvalue problem of electrostatic microinstabilities in a tokamak plasma is presented in the framework of gyrokinetic theory. The approach is the generalization of methods previously developed for a cylindrical system [S. Brunner and J. Vaclavik, Phys. Plasmas 5, 365 (1998)]. By solving the spectral problem in a special Fourier space adapted to the curved geometry, orbit width as well as Larmor radius can be kept to all orders. For a first numerical implementation, a large aspect ratio plasma with circular concentric magnetic surfaces is considered. A root finding algorithm for identifying the eigenfrequencies, based on a higher order Nyquist method, enables straightforward implementation on a parallel computer. Illustrative results for ion temperature gradient-related instabilities are presented. These include scaling studies of the radial width, and toroidicity and magnetic shear scans, as well as the effects of nonadiabatic trapped electron dynamics.

  11. Monte Carlo particle-in-cell methods for the simulation of the Vlasov-Maxwell gyrokinetic equations

    NASA Astrophysics Data System (ADS)

    Bottino, A.; Sonnendrücker, E.

    2015-10-01

    > The particle-in-cell (PIC) algorithm is the most popular method for the discretisation of the general 6D Vlasov-Maxwell problem and it is widely used also for the simulation of the 5D gyrokinetic equations. The method consists of coupling a particle-based algorithm for the Vlasov equation with a grid-based method for the computation of the self-consistent electromagnetic fields. In this review we derive a Monte Carlo PIC finite-element model starting from a gyrokinetic discrete Lagrangian. The variations of the Lagrangian are used to obtain the time-continuous equations of motion for the particles and the finite-element approximation of the field equations. The Noether theorem for the semi-discretised system implies a certain number of conservation properties for the final set of equations. Moreover, the PIC method can be interpreted as a probabilistic Monte Carlo like method, consisting of calculating integrals of the continuous distribution function using a finite set of discrete markers. The nonlinear interactions along with numerical errors introduce random effects after some time. Therefore, the same tools for error analysis and error reduction used in Monte Carlo numerical methods can be applied to PIC simulations.

  12. Impact of the neoclassical distribution function on turbulent impurity and momentum fluxes: fluid model and gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    Manas, P.; Hornsby, W. A.; Angioni, C.; Camenen, Y.; Peeters, A. G.

    2017-03-01

    The impact of the neoclassical background on turbulent impurity transport is investigated by means of gyrokinetic simulations supported by fluid equations. The latter are derived, using a Laguerre polynomials expansion of the first order neoclassical distribution function, and analytical expressions of the turbulent momentum flux and impurity transport coefficients are assessed. Comparisons of gyrokinetic simulations including this neoclassical background (coupling between the codes GKW and NEO) and the fluid model are used to identify the main mechanisms behind the modification of the turbulent transport channels and benchmark the numerical implementation. These mechanisms include a modification of the parallel dynamics of the main ions and direct contributions stemming from the asymmetry in the parallel velocity space of the neoclassical distribution function. The latter which is found dominant for turbulent impurity transport, increases with increasing collisionality, R/{L}{Ti}, R/{L}n, impurity mass, safety factor and aspect ratio. These contributions to momentum and impurity fluxes are also found to depend on the directions of the toroidal magnetic field and plasma current.

  13. Center for Gyrokinetic Particle Simulations of Turbulent Transport in Burning Plasmas

    SciTech Connect

    Scott, Parker

    2011-05-02

    This is the Final Technical Report for University of Colorado's portion of the SciDAC project 'Center for Gyrokinetic Particle Simulation of Turbulent Transport.' This is funded as a multi-institutional SciDAC Center and W.W. Lee at the Princeton Plasma Physics Laboratory is the lead Principal Investigator. Scott Parker is the local Principal Investigator for University of Colorado and Yang Chen is a Co-Principal Investigator. This is Cooperative Agreement DE-FC02-05ER54816. Research personnel include Yang Chen (Senior Research Associate), Jianying Lang (Graduate Research Associate, Ph.D. Physics Student) and Scott Parker (Associate Professor). Research includes core microturbulence studies of NSTX, simulation of trapped electron modes, development of efficient particle-continuum hybrid methods and particle convergence studies of electron temperature gradient driven turbulence simulations. Recently, the particle-continuum method has been extended to five-dimensions in GEM. We find that actually a simple method works quite well for the Cyclone base case with either fully kinetic or adiabatic electrons. Particles are deposited on a 5D phase-space grid using nearest-grid-point interpolation. Then, the value of delta-f is reset, but not the particle's trajectory. This has the effect of occasionally averaging delta-f of nearby (in the phase space) particles. We are currently trying to estimate the dissipation (or effective collision operator). We have been using GEM to study turbulence and transport in NSTX with realistic equilibrium density and temperature profiles, including impurities, magnetic geometry and ExB shear flow. Greg Rewoldt, PPPL, has developed a TRANSP interface for GEM that specifies the equilibrium profiles and parameters needed to run realistic NSTX cases. Results were reported at the American Physical Society - Division of Plasma Physics, and we are currently running convergence studies to ensure physical results. We are also studying the effect of

  14. 3D hybrid simulations with gyrokinetic particle ions and fluid electrons

    SciTech Connect

    Belova, E.V.; Park, W.; Fu, G.Y.; Strauss, H.R.; Sugiyama, L.E.

    1998-12-31

    The previous hybrid MHD/particle model (MH3D-K code) represented energetic ions as gyrokinetic (or drift-kinetic) particles coupled to MHD equations using the pressure or current coupling scheme. A small energetic to bulk ion density ratio was assumed, n{sub h}/n{sub b} {much_lt} 1, allowing the neglect of the energetic ion perpendicular inertia in the momentum equation and the use of MHD Ohm`s law E = {minus}v{sub b} {times} B. A generalization of this model in which all ions are treated as gyrokinetic/drift-kinetic particles and fluid description is used for the electron dynamics is considered in this paper.

  15. Multi-Channel Validation of Nonlinear Gyrokinetic Simulations in Alcator C-Mod I-mode Plasmas

    NASA Astrophysics Data System (ADS)

    Creely, A. J.

    2016-10-01

    New multi-channel validation of nonlinear gyrokinetic simulations (GYRO) is carried out for I-mode plasmas on Alcator C-Mod, utilizing heat fluxes, profile stiffness, and density and temperature fluctuations. I-mode plasmas are characterized by high energy confinement, similar to H-mode, but with L-mode-like particle confinement, making them favorable for reactors due to natural absence of ELMs, but without impurity accumulation [Whyte NF 2010]. At C-Mod, I-mode plasmas have been obtained across a wide range of plasma currents (Ip = 0.55-1.2MA) and magnetic fields (Bt = 2.8-8.0T). I-mode is also actively studied at ASDEX Upgrade, DIII-D and other tokamaks [Hubbard NF 2016]. Open questions remain regarding core transport in I-mode compared to L and H-mode, making validation studies in I-mode of great interest. Previous work at C-Mod found that ITG/TEM-scale GYRO simulations can match both electron and ion heat fluxes within error bars in I-mode [White PoP 2015], suggesting that multi-scale, cross-scale coupling effects [Howard PoP 2016] may be less important in I-mode than in L-mode. Adding the constraint of experimental perturbative heat diffusivity, however, revealed that ITG/TEM scale simulations do not adequately capture the high profile stiffness in I-mode [Creely NF 2016]. These results motivated more comprehensive comparisons of gyrokinetic simulations with I-mode plasmas. This talk expands upon past I-mode GYRO validation work to simultaneously constrain nonlinear gyrokinetic simulations with experimental electron and ion heat fluxes, electron temperature fluctuations measured with Correlation ECE, density fluctuations measured with Phase Contrast Imaging and reflectometry, and the temperature profile stiffness measured using partial sawtooth heat pulses. This work is supported by the US DOE under Grants DE-SC0006419 and DEFC02-99ER54512-CMOD.

  16. Energetically consistent collisional gyrokinetics

    SciTech Connect

    Burby, J. W.; Brizard, A. J.; Qin, H.

    2015-10-15

    We present a formulation of collisional gyrokinetic theory with exact conservation laws for energy and canonical toroidal momentum. Collisions are accounted for by a nonlinear gyrokinetic Landau operator. Gyroaveraging and linearization do not destroy the operator's conservation properties. Just as in ordinary kinetic theory, the conservation laws for collisional gyrokinetic theory are selected by the limiting collisionless gyrokinetic theory.

  17. An explicit large time step particle-in-cell scheme for nonlinear gyrokinetic simulations in the electromagnetic regime

    NASA Astrophysics Data System (ADS)

    Kleiber, R.; Hatzky, R.; Könies, A.; Mishchenko, A.; Sonnendrücker, E.

    2016-03-01

    A new algorithm for electromagnetic gyrokinetic simulations, the so called "pullback transformation scheme" proposed by Mishchenko et al. [Phys. Plasmas 21, 092110 (2014)] is motivated as an explicit time integrator reset after each full timestep and investigated in detail. Using a numerical dispersion relation valid in slab geometry, it is shown that the linear properties of the scheme are comparable to those of an implicit v∥ -scheme. A nonlinear extension of the mixed variable formulation, derived consistently from a field Lagrangian, is proposed. The scheme shows excellent numerical properties with a low statistical noise level and a large time step especially for MHD modes. The example of a nonlinear slab tearing mode simulation is used to illustrate the properties of different formulations of the physical model equations.

  18. Comparison of BES measurements of ion-scale turbulence with direct gyro-kinetic simulations of MAST L-mode plasmas

    NASA Astrophysics Data System (ADS)

    Field, A. R.; Dunai, D.; Ghim, Y.-c.; Hill, P.; McMillan, B.; Roach, C. M.; Saarelma, S.; Schekochihin, A. A.; Zoletnik, S.; the MAST Team

    2014-02-01

    Observations of ion-scale (kyρi ⩽ 1) density turbulence of relative amplitude ≳0.2% are available on the Mega Amp Spherical Tokamak (MAST) using a 2D (8 radial × 4 poloidal channel) imaging beam emission spectroscopy diagnostic. Spatial and temporal characteristics of this turbulence, i.e., amplitudes, correlation times, radial and perpendicular correlation lengths and apparent phase velocities of the density contours, are determined by means of correlation analysis. For a low-density, L-mode discharge with strong equilibrium flow shear exhibiting an internal transport barrier in the ion channel, the observed turbulence characteristics are compared with synthetic density turbulence data generated from global, non-linear, gyro-kinetic simulations using the particle-in-cell code NEMORB. This validation exercise highlights the need to include increasingly sophisticated physics, e.g., kinetic treatment of trapped electrons, equilibrium flow shear and collisions, to reproduce most of the characteristics of the observed turbulence. Even so, significant discrepancies remain: an underprediction by the simulations of the turbulence amplitude and heat flux at plasma periphery and the finding that the correlation times of the numerically simulated turbulence are typically two orders of magnitude longer than those measured in MAST. Comparison of these correlation times with various linear timescales suggests that, while the measured turbulence is strong and may be ‘critically balanced’, the simulated turbulence is weak.

  19. Weimer Award: Reduction of core turbulence and transport in I-mode and comparisons with nonlinear gyrokinetic simulations

    NASA Astrophysics Data System (ADS)

    White, Anne

    2014-10-01

    Understanding transport in high performance ELM-suppressed tokamak plasmas is of great interest for ITER and other future experiments. `I-mode' regime on Alcator C-Mod, also known as `improved L-mode' on ASDEX Upgrade, has several favorable characteristics: pedestals in electron and ion temperature, with ITER98y2 H-factors similar to and exceeding H-mode [Hubbard et al., Phys. Plasmas 18, 056115 (2011)], but without a density pedestal and without impurity accumulation and without ELMs. Most research on I-mode focuses on changes in edge and pedestal turbulence/transport and stability. In this work, transport in I-mode is probed by measuring changes in core turbulence across L-I transitions at Alcator C-Mod and comparing with nonlinear gyrokinetic simulations. Long wavelength (kθρs < 0.5) density fluctuation levels decrease from L-mode levels by up to 30% in I-mode, and long wavelength (kθρs < 0.3) electron temperature fluctuation levels decrease by up to 70%, reaching the instrumental sensitivity limit. Gyrokinetic simulation results suggest that ExB shear in the core of these intrinsically rotating plasmas can reduce the fluctuation amplitude in I-mode. As the pedestal temperature increases across slow L-I transitions, core density fluctuations (0.40 < ρ <0.95) are reduced prior to the onset of the edge-localized (0.99 < ρ < 1.0) weakly coherent mode (WCM) and prior to the reduction of low-frequency turbulence in the edge/pedestal region (0.99 < ρ < 1.0), which suggests that effects of profile stiffness across the radius can also lead to reduced core turbulence. By comparing experimental measurements from Alcator C-Mod to nonlinear gyrokinetic simulations and to different models of profile stiffness, this talk will explore the impact of core turbulence and transport on overall I-mode confinement and on the separation of particle and heat transport in I-mode. This work was supported by U.S. Department of Energy Contract DE-FC02-99ER54512-CMOD.

  20. Verification and Validation of Gyrokinetic Particle Simulation of Fast Electron Driven Beta-induced Alfvén Eigenmodes on HL-2A Tokamak

    NASA Astrophysics Data System (ADS)

    Cheng, Junyi; Chen, Yang; Zhang, Wenlu; Lin, Zhihong; Chen, Wei; Yu, Limin; Ding, Xuantong

    2015-11-01

    A verification and validation study is carried out for a sequence of fast electron driven beta-induced Alfven eigenmodes in HL-2A tokamak plasma. The fast electron driven beta induced Alfvén eigenmode (e-BAE) in toroidal plasmas is investigated for the first time using global gyrokinetic particle simulations, where the fast electrons are described by the drift kinetic model. The phase space structure shows that only the processional resonance is responsible for the e-BAE excitations while fast-ion driven BAE can be excited through all the channels such as transit, drift-bounce, and processional resonance. For weakly nonlinear driven case, frequency is observed to be in phase with the particle energy flux, and mode structure is almost the same as linear stage . While in the strongly driven nonlinear case, BAAE is excited after the BAE mode saturated. The simulation of e-BAE with the HL-2A tokamak parameters is taken. Three modes n/m = 1/2 , 2/5 ,1/3 in HL-2A can be excited in our simulations.

  1. Gyrokinetic particle simulation of neoclassical transport in the pedestal/scrape-off region of a tokamak plasma

    NASA Astrophysics Data System (ADS)

    Ku, S.; Chang, C.-S.; Adams, M.; Cummings, J.; Hinton, F.; Keyes, D.; Klasky, S.; Lee, W.; Lin, Z.; Parker, S.; CPES Team

    2006-09-01

    A gyrokinetic neoclassical solution for a diverted tokamak edge plasma has been obtained for the first time using the massively parallel Jaguar XT3 computer at Oak Ridge National Laboratory. The solutions show similar characteristics to the experimental observations: electric potential is positive in the scrape-off layer and negative in the H-mode layer, and the parallel rotation is positive in the scrape-off layer and at the inside boundary of the H-mode layer. However, the solution also makes a new physical discovery that there is a strong ExB convective flow in the scrape-off plasma. A general introduction to the edge simulation problem is also presented.

  2. Gyrokinetic particle simulation of neoclassical transport in the pedestal/scrape-off region of a tokamak plasma

    SciTech Connect

    Adams, Mark; Chang, C. S.; Cummings, J.; Hinton, F.; Keyes, David E; Klasky, Scott A; Ku, S.; Lee, W. W.; Lin, Z.; Parker, Scott; CPES Team, the

    2006-01-01

    A gyrokinetic neoclassical solution for a diverted tokamak edge plasma has been obtained for the first time using the massively parallel Jaguar XT3 computer at Oak Ridge National Laboratory. The solutions show similar characteristics to the experimental observations: electric potential is positive in the scrape-off layer and negative in the H-mode layer, and the parallel rotation is positive in the scrape-off layer and at the inside boundary of the H-mode layer. However, the solution also makes a new physical discovery that there is a strong ExB convective flow in the scrape-off plasma. A general introduction to the edge simulation problem is also presented.

  3. 3D electrostatic gyrokinetic electron and fully kinetic ion simulation of lower-hybrid drift instability of Harris current sheet

    DOE PAGES

    Wang, Zhenyu; Lin, Yu; Wang, Xueyi; ...

    2016-07-07

    The eigenmode stability properties of three-dimensional lower-hybrid-drift-instabilities (LHDI) in a Harris current sheet with a small but finite guide magnetic field have been systematically studied by employing the gyrokinetic electron and fully kinetic ion (GeFi) particle-in-cell (PIC) simulation model with a realistic ion-to-electron mass ratio mi/me. In contrast to the fully kinetic PIC simulation scheme, the fast electron cyclotron motion and plasma oscillations are systematically removed in the GeFi model, and hence one can employ the realistic mi/me. The GeFi simulations are benchmarked against and show excellent agreement with both the fully kinetic PIC simulation and the analytical eigenmode theory. Our studies indicate that, for small wavenumbers, ky, along the current direction, the most unstable eigenmodes are peaked at the location wheremore » $$\\vec{k}$$• $$\\vec{B}$$ =0, consistent with previous analytical and simulation studies. Here, $$\\vec{B}$$ is the equilibrium magnetic field and $$\\vec{k}$$ is the wavevector perpendicular to the nonuniformity direction. As ky increases, however, the most unstable eigenmodes are found to be peaked at $$\\vec{k}$$ •$$\\vec{B}$$ ≠0. Additionally, the simulation results indicate that varying mi/me, the current sheet width, and the guide magnetic field can affect the stability of LHDI. Simulations with the varying mass ratio confirm the lower hybrid frequency and wave number scalings.« less

  4. 3D electrostatic gyrokinetic electron and fully kinetic ion simulation of lower-hybrid drift instability of Harris current sheet

    NASA Astrophysics Data System (ADS)

    Wang, Zhenyu; Lin, Yu; Wang, Xueyi; Tummel, Kurt; Chen, Liu

    2016-07-01

    The eigenmode stability properties of three-dimensional lower-hybrid-drift-instabilities (LHDI) in a Harris current sheet with a small but finite guide magnetic field have been systematically studied by employing the gyrokinetic electron and fully kinetic ion (GeFi) particle-in-cell (PIC) simulation model with a realistic ion-to-electron mass ratio mi/me . In contrast to the fully kinetic PIC simulation scheme, the fast electron cyclotron motion and plasma oscillations are systematically removed in the GeFi model, and hence one can employ the realistic mi/me . The GeFi simulations are benchmarked against and show excellent agreement with both the fully kinetic PIC simulation and the analytical eigenmode theory. Our studies indicate that, for small wavenumbers, ky, along the current direction, the most unstable eigenmodes are peaked at the location where k →.B → =0 , consistent with previous analytical and simulation studies. Here, B → is the equilibrium magnetic field and k → is the wavevector perpendicular to the nonuniformity direction. As ky increases, however, the most unstable eigenmodes are found to be peaked at k →.B → ≠0 . In addition, the simulation results indicate that varying mi/me , the current sheet width, and the guide magnetic field can affect the stability of LHDI. Simulations with the varying mass ratio confirm the lower hybrid frequency and wave number scalings.

  5. Gyrokinetic Simulations of RMP Effects on DIII-D Edge Turbulence

    NASA Astrophysics Data System (ADS)

    Taimourzadeh, Sam; Holod, Ihor; Lin, Zhihong; Nazikian, Raffi; Wingen, Andreas

    2016-10-01

    It has been demonstrated that edge localized modes (ELMs) can be fully suppressed in DIII-D H-mode plasmas with the application of resonant magnetic perturbations (RMPs), and that there is a corresponding reduction of pedestal gradients, changes in rotation, and changes in the radial electric field (Er) profile. However, with the application of RMPs there is also an increase in long wavelength, electrostatic turbulence on top of the pedestal, as observed with BES, DBS, and other fluctuation diagnostics. Using the Gyrokinetic Toroidal Code (GTC), DIII-D shots 158103, at times 3750 ms (ELMing w/ RMP) and 3050 ms (ELM suppressed w/ RMP), and shot 158104.1350 (ELMing) are investigated, and a link between increased pedestal top turbulence, during the ELM suppressed phase, and a shift in the Er profile is demonstrated.

  6. Comparison of Implicit Multiscale Full Kinetics to Gyrokinetics

    NASA Astrophysics Data System (ADS)

    Parker, Scott; Sturdevant, Benjamin; Chen, Yang

    2016-10-01

    Recent progress has been made developing full kinetic Lorentz force ion dynamics using implicit multiscale techniques. It is now possible to capture low-frequency physics along with finite Larmor radius (FLR) effects with a fully kinetic multiscale delta-f particle simulation. The utility of such a model is to be able to verify gyrokinetics in situations where the smallness of the ordering parameters are under question. Additionally, such a model can help identify what higher order terms in gyrokinetics might be important. Orbit averaging and sub-cycling are utilized with an implicit particle time advance based on variational principles. This produces stable and accurate ion trajectories on long time scales. Excellent agreement with the gyrokinetic dispersion relation is obtained including full FLR effects. Ion Bernstein waves are easily suppressed with the implicit time advance. We have developed a global toroidal electrostatic adiabatic electron Lorentz ion code. We will report our linear results benchmarking Lorentz ions with gyrokinetics for the Cyclone base case. We will also present our progress on ion including drift-kinetic electrons and electromagnetic perturbations.

  7. Energetically consistent collisional gyrokinetics

    SciTech Connect

    Burby, J. W.; Brizard, A. J.; Qin, H.

    2015-10-30

    Here, we present a formulation of collisional gyrokinetic theory with exact conservation laws for energy and canonical toroidal momentum. Collisions are accounted for by a nonlinear gyrokinetic Landau operator. Gyroaveraging and linearization do not destroy the operator's conservation properties. Just as in ordinary kinetic theory, the conservation laws for collisional gyrokinetic theory are selected by the limiting collisionless gyrokinetic theory. (C) 2015 AIP Publishing LLC.

  8. Gyrokinetic treatment of GAE modes in cylindrical geometry

    SciTech Connect

    Eremin, D.

    2006-11-30

    Global Alfven eigenmodes (GAEs) are investigated in cylindrical geometry both analytically and numerically. These modes are of particular importance in low-shear magnetic configurations, such as modern stellarators. Analytical treatment starts from the linearised equations of gyrokinetics and yields a generalized dispersion relation for GAE with FLR and kinetic effects taken into account, which is demonstrated to reduce to the well-known MHD counterpart in the appropriate limit. An eigenvalue code is developed to solve the dispersion relation, which is used to investigate the kinetic analogs of GAE modes in various regimes with different beta. On the other hand, GAE modes are simulated with global linear particle-in-cell (PIC) electromagnetic gyrokinetic code following self-consistent time evolution of electromagnetic fields and plasma. GAE modes are observed and their damping rate agrees with predictions made by the eigenvalue code.

  9. Particle-in-cell δf gyrokinetic simulations of the microtearing mode

    SciTech Connect

    Chowdhury, J.; Chen, Yang; Wan, Weigang; Parker, Scott E.; Guttenfelder, W.; Canik, J. M.

    2016-01-15

    The linear stability properties of the microtearing mode are investigated in the edge and core regimes of the National Spherical Torus Experiment (NSTX) using the particle-in-cell method based gyrokinetic code GEM. The dependence of the mode on various equilibrium quantities in both regions is compared. While the microtearing mode in the core depends upon the electron-ion collisions, in the edge region, it is found to be weakly dependent on the collisions and exists even when the collision frequency is zero. The electrostatic potential is non-negligible in each of the cases. It plays opposite roles in the core and edge of NSTX. While the microtearing mode is partially stabilized by the electrostatic potential in the core, it has substantial destabilizing effect in the edge. In addition to the spherical tokamak, we also study the microtearing mode for parameters relevant to the core of a standard tokamak. The fundamental characteristics of the mode remain the same; however, the electrostatic potential in this case is destabilizing as opposed to the core of NSTX. The velocity dependence of the collision frequency, which is crucial for the mode to grow in slab calculations, is not required to destabilize the mode in toroidal devices.

  10. Verification and validation of linear gyrokinetic simulation of Alfven eigenmodes in the DIII-D tokamak

    SciTech Connect

    Spong, D. A.; Bass, E. M.; Deng, W.; Heidbrink, W. W.; Lin, Z.; Tobias, B.; Van Zeeland, M. A.; Austin, M. E.; Domier, C. W.; Luhmann, N. C. Jr.

    2012-08-15

    A verification and validation study is carried out for a sequence of reversed shear Alfven instability time slices. The mode frequency increases in time as the minimum (q{sub min}) in the safety factor profile decreases. Profiles and equilibria are based upon reconstructions of DIII-D discharge (no. 142111) in which many such frequency up-sweeping modes were observed. Calculations of the frequency and mode structure evolution from two gyrokinetic codes, GTC and GYRO, and a gyro-Landau fluid code TAEFL are compared. The experimental mode structure of the instability was measured using time-resolved two-dimensional electron cyclotron emission imaging. The three models reproduce the frequency upsweep event within {+-}10% of each other, and the average of the code predictions is within {+-}8% of the measurements; growth rates are predicted that are consistent with the observed spectral line widths. The mode structures qualitatively agree with respect to radial location and width, dominant poloidal mode number, ballooning structure, and the up-down asymmetry, with some remaining differences in the details. Such similarities and differences between the predictions of the different models and the experimental results are a valuable part of the verification/validation process and help to guide future development of the modeling efforts.

  11. 3D electrostatic gyrokinetic electron and fully kinetic ion simulation of lower-hybrid drift instability of Harris current sheet

    SciTech Connect

    Wang, Zhenyu; Lin, Yu; Wang, Xueyi; Tummel, Kurt; Chen, Liu

    2016-07-07

    The eigenmode stability properties of three-dimensional lower-hybrid-drift-instabilities (LHDI) in a Harris current sheet with a small but finite guide magnetic field have been systematically studied by employing the gyrokinetic electron and fully kinetic ion (GeFi) particle-in-cell (PIC) simulation model with a realistic ion-to-electron mass ratio mi/me. In contrast to the fully kinetic PIC simulation scheme, the fast electron cyclotron motion and plasma oscillations are systematically removed in the GeFi model, and hence one can employ the realistic mi/me. The GeFi simulations are benchmarked against and show excellent agreement with both the fully kinetic PIC simulation and the analytical eigenmode theory. Our studies indicate that, for small wavenumbers, ky, along the current direction, the most unstable eigenmodes are peaked at the location where $\\vec{k}$• $\\vec{B}$ =0, consistent with previous analytical and simulation studies. Here, $\\vec{B}$ is the equilibrium magnetic field and $\\vec{k}$ is the wavevector perpendicular to the nonuniformity direction. As ky increases, however, the most unstable eigenmodes are found to be peaked at $\\vec{k}$ •$\\vec{B}$ ≠0. Additionally, the simulation results indicate that varying mi/me, the current sheet width, and the guide magnetic field can affect the stability of LHDI. Simulations with the varying mass ratio confirm the lower hybrid frequency and wave number scalings.

  12. Multi-channel transport experiments at Alcator C-Mod and comparison with gyrokinetic simulations

    SciTech Connect

    White, A. E.; Howard, N. T.; Greenwald, M.; Reinke, M. L.; Sung, C.; Baek, S.; Barnes, M.; Dominguez, A.; Ernst, D.; Gao, C.; Hubbard, A. E.; Hughes, J. W.; Lin, Y.; Parra, F.; Porkolab, M.; Rice, J. E.; Walk, J.; Wukitch, S. J.; Team, Alcator C-Mod; Candy, J.; and others

    2013-05-15

    Multi-channel transport experiments have been conducted in auxiliary heated (Ion Cyclotron Range of Frequencies) L-mode plasmas at Alcator C-Mod [Marmar and Alcator C-Mod Group, Fusion Sci. Technol. 51(3), 3261 (2007)]. These plasmas provide good diagnostic coverage for measurements of kinetic profiles, impurity transport, and turbulence (electron temperature and density fluctuations). In the experiments, a steady sawtoothing L-mode plasma with 1.2 MW of on-axis RF heating is established and density is scanned by 20%. Measured rotation profiles change from peaked to hollow in shape as density is increased, but electron density and impurity profiles remain peaked. Ion or electron heat fluxes from the two plasmas are the same. The experimental results are compared directly to nonlinear gyrokinetic theory using synthetic diagnostics and the code GYRO [Candy and Waltz, J. Comput. Phys. 186, 545 (2003)]. We find good agreement with experimental ion heat flux, impurity particle transport, and trends in the fluctuation level ratio (T(tilde sign){sub e}/T{sub e})/(ñ{sub e}/n{sub e}), but underprediction of electron heat flux. We find that changes in momentum transport (rotation profiles changing from peaked to hollow) do not correlate with changes in particle transport, and also do not correlate with changes in linear mode dominance, e.g., Ion Temperature Gradient versus Trapped Electron Mode. The new C-Mod results suggest that the drives for momentum transport differ from drives for heat and particle transport. The experimental results are inconsistent with present quasilinear models, and the strong sensitivity of core rotation to density remains unexplained.

  13. Three-dimensional gyrokinetic particle-in-cell simulation of plasmas on a massively parallel computer: Final report on LDRD Core Competency Project, FY 1991--FY 1993

    SciTech Connect

    Byers, J.A.; Williams, T.J.; Cohen, B.I.; Dimits, A.M.

    1994-04-27

    One of the programs of the Magnetic fusion Energy (MFE) Theory and computations Program is studying the anomalous transport of thermal energy across the field lines in the core of a tokamak. We use the method of gyrokinetic particle-in-cell simulation in this study. For this LDRD project we employed massively parallel processing, new algorithms, and new algorithms, and new formal techniques to improve this research. Specifically, we sought to take steps toward: researching experimentally-relevant parameters in our simulations, learning parallel computing to have as a resource for our group, and achieving a 100 {times} speedup over our starting-point Cray2 simulation code`s performance.

  14. Nonlinear gyrokinetic equations

    SciTech Connect

    Dubin, D.H.E.; Krommes, J.A.; Oberman, C.; Lee, W.W.

    1983-03-01

    Nonlinear gyrokinetic equations are derived from a systematic Hamiltonian theory. The derivation employs Lie transforms and a noncanonical perturbation theory first used by Littlejohn for the simpler problem of asymptotically small gyroradius. For definiteness, we emphasize the limit of electrostatic fluctuations in slab geometry; however, there is a straight-forward generalization to arbitrary field geometry and electromagnetic perturbations. An energy invariant for the nonlinear system is derived, and various of its limits are considered. The weak turbulence theory of the equations is examined. In particular, the wave kinetic equation of Galeev and Sagdeev is derived from an asystematic truncation of the equations, implying that this equation fails to consider all gyrokinetic effects. The equations are simplified for the case of small but finite gyroradius and put in a form suitable for efficient computer simulation. Although it is possible to derive the Terry-Horton and Hasegawa-Mima equations as limiting cases of our theory, several new nonlinear terms absent from conventional theories appear and are discussed.

  15. Gyrokinetic turbulent heating

    SciTech Connect

    Hinton, F. L.; Waltz, R. E.

    2006-10-15

    Expressions for particle and energy fluxes and heating rates due to turbulence are derived. These fluxes and heating rates are identified from moments of an extended drift-kinetic equation for the equilibrium distribution function. These include neoclassical as well as turbulent diffusion and heating. Phase-space conservation is demonstrated, allowing the drift-kinetic equation to be expressed in conservative form. This facilitates taking moments with few approximations, mainly those consistent with drift kinetics for the equilibrium distribution function and the relative smallness of the fluctuations. The turbulent heating is uniquely defined by choosing the standard gyrokinetic definition for the energy flux. With this definition, most of the heating can be expressed in the form of ohmic heating from turbulent parallel and perpendicular current density perturbations. The latter current is identified with grad-B and curvature drifts, plus terms involving magnetic perturbations (which are smaller for low beta). A small contribution to the heating comes from the divergence of an energy flux that is dependent on the finite gyroradius of the ions. The fluxes and heating rates are expressed in a form that can be easily evaluated from gyrokinetic turbulence simulations.

  16. Gyrokinetic and kinetic particle-in-cell simulations of guide-field reconnection. I. Macroscopic effects of the electron flows

    SciTech Connect

    Muñoz, P. A. Kilian, P.; Büchner, J.; Told, D.; Jenko, F.

    2015-08-15

    In this work, we compare gyrokinetic (GK) with fully kinetic Particle-in-Cell (PIC) simulations of magnetic reconnection in the limit of strong guide field. In particular, we analyze the limits of applicability of the GK plasma model compared to a fully kinetic description of force free current sheets for finite guide fields (b{sub g}). Here, we report the first part of an extended comparison, focusing on the macroscopic effects of the electron flows. For a low beta plasma (β{sub i} = 0.01), it is shown that both plasma models develop magnetic reconnection with similar features in the secondary magnetic islands if a sufficiently high guide field (b{sub g} ≳ 30) is imposed in the kinetic PIC simulations. Outside of these regions, in the separatrices close to the X points, the convergence between both plasma descriptions is less restrictive (b{sub g} ≳ 5). Kinetic PIC simulations using guide fields b{sub g} ≲ 30 reveal secondary magnetic islands with a core magnetic field and less energetic flows inside of them in comparison to the GK or kinetic PIC runs with stronger guide fields. We find that these processes are mostly due to an initial shear flow absent in the GK initialization and negligible in the kinetic PIC high guide field regime, in addition to fast outflows on the order of the ion thermal speed that violate the GK ordering. Since secondary magnetic islands appear after the reconnection peak time, a kinetic PIC/GK comparison is more accurate in the linear phase of magnetic reconnection. For a high beta plasma (β{sub i} = 1.0) where reconnection rates and fluctuations levels are reduced, similar processes happen in the secondary magnetic islands in the fully kinetic description, but requiring much lower guide fields (b{sub g} ≲ 3)

  17. Final report on work for Center for Gyrokinetic Particle Simulation of Turbulent Transport in Burning Plasmas — Tools for Improved Data Logistics

    SciTech Connect

    Micah Beck

    2008-09-14

    This project focused on the use of Logistical Networking technology to address the challenges involved in rapid sharing of data from the the Center's gyrokinetic particle simulations, which can be on the order of terabytes per time step, among researchers at a number of geographically distributed locations. There is a great need to manage data on this scale in a flexible manner, with simulation code, file system, database and visualization functions requiring access. The project used distributed data management infrastructure based on Logistical Networking technology to address these issues in a way that maximized interoperability and achieved the levels of performance the required by the Center's application community. The work focused on the development and deployment of software tools and infrastructure for the storage and distribution of terascale datasets generated by simulations running at the National Center for Computational Science at Oak Ridge National Laboratory.

  18. Petascale Parallelization of the Gyrokinetic Toroidal Code

    SciTech Connect

    Ethier, Stephane; Adams, Mark; Carter, Jonathan; Oliker, Leonid

    2010-05-01

    The Gyrokinetic Toroidal Code (GTC) is a global, three-dimensional particle-in-cell application developed to study microturbulence in tokamak fusion devices. The global capability of GTC is unique, allowing researchers to systematically analyze important dynamics such as turbulence spreading. In this work we examine a new radial domain decomposition approach to allow scalability onto the latest generation of petascale systems. Extensive performance evaluation is conducted on three high performance computing systems: the IBM BG/P, the Cray XT4, and an Intel Xeon Cluster. Overall results show that the radial decomposition approach dramatically increases scalability, while reducing the memory footprint - allowing for fusion device simulations at an unprecedented scale. After a decade where high-end computing (HEC) was dominated by the rapid pace of improvements to processor frequencies, the performance of next-generation supercomputers is increasingly differentiated by varying interconnect designs and levels of integration. Understanding the tradeoffs of these system designs is a key step towards making effective petascale computing a reality. In this work, we examine a new parallelization scheme for the Gyrokinetic Toroidal Code (GTC) [?] micro-turbulence fusion application. Extensive scalability results and analysis are presented on three HEC systems: the IBM BlueGene/P (BG/P) at Argonne National Laboratory, the Cray XT4 at Lawrence Berkeley National Laboratory, and an Intel Xeon cluster at Lawrence Livermore National Laboratory. Overall results indicate that the new radial decomposition approach successfully attains unprecedented scalability to 131,072 BG/P cores by overcoming the memory limitations of the previous approach. The new version is well suited to utilize emerging petascale resources to access new regimes of physical phenomena.

  19. 2D properties of core turbulence on DIII-D and comparison to gyrokinetic simulations

    SciTech Connect

    Shafer, Morgan W; Fonck, R. J.; McKee, G. R.; Holland, Chris; White, A. E.; Schlossberg, D J

    2012-01-01

    Quantitative 2D characteristics of localized density fluctuations are presented over the range of 0.3 < r/a < 0.9 in L-mode plasmas on DIII-D [J. L. Luxon, Nucl. Fusion 42, 614 (2002)]. Broadband density fluctuations increase in amplitude from (n) over tilde/n < 0.5% in the deep core to (n) over tilde/n similar to 2.5% near the outer region. The observed Doppler-shift due to the E x B velocity matches well with the measured turbulence group and phase velocities (in toroidally rotating neutral beam heated plasmas). Turbulence decorrelation rates are found to be similar to 200 kHz at the edge and to decrease toward the core (0.45 < r/a < 0.9) where they approach the E x B shearing rate (similar to 50 kHz). Radial and poloidal correlation lengths are found to scale with the ion gyroradius and exhibit an asymmetric poloidally elongated eddy structure. The ensemble-averaged turbulent eddy structure changes its tilt with respect to the radial-poloidal coordinates in the core, consistent with an E x B shear mechanism. The 2D spatial correlation and wavenumber spectra [S(k(r); k(theta))] are presented and compared to nonlinear flux-tube GYRO simulations at two radii, r/a = 0.5 and r/a = 0.75, showing reasonable overall agreement, but the GYRO spectrum exhibits a peak at finite kr for r/a = 0.75 that is not observed experimentally; E x B shear may cause this discrepancy. (C) 2012 American Institute of Physics.

  20. Gyrokinetic Fokker-Planck collision operator.

    PubMed

    Li, B; Ernst, D R

    2011-05-13

    The gyrokinetic linearized exact Fokker-Planck collision operator is obtained in a form suitable for plasma gyrokinetic equations, for arbitrary mass ratio. The linearized Fokker-Planck operator includes both the test-particle and field-particle contributions, and automatically conserves particles, momentum, and energy, while ensuring non-negative entropy production. Finite gyroradius effects in both field-particle and test-particle terms are evaluated. When implemented in gyrokinetic simulations, these effects can be precomputed. The field-particle operator at each time step requires the evaluation of a single two-dimensional integral, and is not only more accurate, but appears to be less expensive to evaluate than conserving model operators.

  1. Nonlinear gyrokinetic equations for tokamak microturbulence

    SciTech Connect

    Hahm, T.S.

    1988-05-01

    A nonlinear electrostatic gyrokinetic Vlasov equation, as well as Poisson equation, has been derived in a form suitable for particle simulation studies of tokamak microturbulence and associated anomalous transport. This work differs from the existing nonlinear gyrokinetic theories in toroidal geometry, since the present equations conserve energy while retaining the crucial linear and nonlinear polarization physics. In the derivation, the action-variational Lie perturbation method is utilized in order to preserve the Hamiltonian structure of the original Vlasov-Poisson system. Emphasis is placed on the dominant physics of the collective fluctuations in toroidal geometry, rather than on details of particle orbits. 13 refs.

  2. Gyrokinetic studies of stellarator turbulent transport via Gene

    NASA Astrophysics Data System (ADS)

    Mynick, H. E.; Xanthopoulos, P.; Boozer, A. H.

    2009-05-01

    We study the turbulence and turbulent transport in stellarators (and tokamaks), via analysis of simulation results from the 3D gyrokinetic code Gene with particular emphasis on the configuration-dependence of turbulence characteristics. Present day stellarator designs seek to optimize stellarator neoclassical transport. With the advent of simulation codes like Gene, one can now seek to characterize and then optimize designs for TOTAL transport. The comparison between different configurations in stellarator parameter space is of 2 types, global and local. Global comparisons look at changes in plasma performance (eg, levels of turbulent fluxes and zonal flows, dependence of these on plasma gradients) between very different designs (eg, a QA versus a QI/QO design). Local comparisons look at the changes in performance between slight variants of the same design. Both aid in gaining insight into which geometric features (curvature, local and global shear, etc) are important in determining the turbulent characteristics. P. Xanthopoulos, F. Jenko, Phys.Plasmas 13, 092301 (2006).

  3. Linear gyrokinetic simulations of microinstabilities within the pedestal region of H-mode NSTX discharges in a highly shaped geometry

    SciTech Connect

    Coury, M.; Guttenfelder, W.; Mikkelsen, D. R.; Canik, J. M.; Canal, G. P.; Diallo, A.; Kaye, S.; Kramer, G. J.; Maingi, R.

    2016-06-30

    Linear (local) gyrokinetic predictions of edge microinstabilities in highly shaped, lithiated and non-lithiated NSTX discharges are reported using the gyrokinetic code GS2. Microtearing modes dominate the non-lithiated pedestal top. The stabilization of these modes at the lithiated pedestal top enables the electron temperature pedestal to extend further inwards, as observed experimentally. Kinetic ballooning modes are found to be unstable mainly at the mid-pedestal of both types of discharges, with un- stable trapped electron modes nearer the separatrix region. At electron wavelengths, ETG modes are found to be unstable from mid-pedestal outwards for ηe, exp ~2.2 with higher growth rates for the lithiated discharge. Near the separatrix, the critical temperature gradient for driving ETG modes is reduced in the presence of lithium, re ecting the reduction of the lithiated density gradients observed experimentally. A preliminary linear study in the edge of non-lithiated discharges shows that the equilibrium shaping alters the electrostatic modes stability, found more unstable at high plasma shaping.

  4. Linear gyrokinetic simulations of microinstabilities within the pedestal region of H-mode NSTX discharges in a highly shaped geometry

    DOE PAGES

    Coury, M.; Guttenfelder, W.; Mikkelsen, D. R.; ...

    2016-06-30

    Linear (local) gyrokinetic predictions of edge microinstabilities in highly shaped, lithiated and non-lithiated NSTX discharges are reported using the gyrokinetic code GS2. Microtearing modes dominate the non-lithiated pedestal top. The stabilization of these modes at the lithiated pedestal top enables the electron temperature pedestal to extend further inwards, as observed experimentally. Kinetic ballooning modes are found to be unstable mainly at the mid-pedestal of both types of discharges, with un- stable trapped electron modes nearer the separatrix region. At electron wavelengths, ETG modes are found to be unstable from mid-pedestal outwards for ηe, exp ~2.2 with higher growth rates formore » the lithiated discharge. Near the separatrix, the critical temperature gradient for driving ETG modes is reduced in the presence of lithium, re ecting the reduction of the lithiated density gradients observed experimentally. A preliminary linear study in the edge of non-lithiated discharges shows that the equilibrium shaping alters the electrostatic modes stability, found more unstable at high plasma shaping.« less

  5. Continuum Gyrokinetic Edge New Technology

    SciTech Connect

    Dorr, M. R.; Hittinger, J. A.; Dorf, M.; Cohen, R.; Ghosh, D.; Lee, W.; Reynolds, C.

    2016-05-02

    COGENT is a simulation code that models the plasma evolution in the edge region of a tokamak fusion reactor, from the open field line scrape-off layer, across the separatrix, and into the core. The model is based on the 4D gyrokinetic closure of the kinetic equations for a plasma coupled to an electrostatic potential field. The background magnetic field is prescribed either analytically or generated from experimental data, and the grid is aligned with magnetic flux surfaces. Multiple collision operator options are provided, from Krook to fully nonlinear Fokker-Planck.

  6. Second order gyrokinetic theory for particle-in-cell codes

    NASA Astrophysics Data System (ADS)

    Tronko, Natalia; Bottino, Alberto; Sonnendrücker, Eric

    2016-08-01

    The main idea of the gyrokinetic dynamical reduction consists in a systematical removal of the fast scale motion (the gyromotion) from the dynamics of the plasma, resulting in a considerable simplification and a significant gain of computational time. The gyrokinetic Maxwell-Vlasov equations are nowadays implemented in for modeling (both laboratory and astrophysical) strongly magnetized plasmas. Different versions of the reduced set of equations exist, depending on the construction of the gyrokinetic reduction procedure and the approximations performed in the derivation. The purpose of this article is to explicitly show the connection between the general second order gyrokinetic Maxwell-Vlasov system issued from the modern gyrokinetic theory and the model currently implemented in the global electromagnetic Particle-in-Cell code ORB5. Necessary information about the modern gyrokinetic formalism is given together with the consistent derivation of the gyrokinetic Maxwell-Vlasov equations from first principles. The variational formulation of the dynamics is used to obtain the corresponding energy conservation law, which in turn is used for the verification of energy conservation diagnostics currently implemented in ORB5. This work fits within the context of the code verification project VeriGyro currently run at IPP Max-Planck Institut in collaboration with others European institutions.

  7. Sparse Grid Methods in Discontinuous Galerkin Algorithms, and Initial Continuum Gyrokinetic Simulations of NSTX-like SOL Turbulence

    NASA Astrophysics Data System (ADS)

    Hakim, Ammar; Hammett, Greg; Shi, Eric

    2016-10-01

    We have developed a hybrid discontinuous/continuous Galerkin scheme for gyrokinetic equations. Our scheme solves the equations in the Poisson bracket formulation and, with a careful choice of basis functions, conserves energy exactly. We use a sparse grid representation to reduce cost. We have developed a novel form of sheath boundary conditions, going beyond logical-sheath BCs, that allows current flow into the boundaries, yet retains overall charge continuity as well as conserves energy. First applications to a simplified model of the NSTX-like scrape-off-layer (SOL) are presented. We treat the SOL in simplified geometry, retaining magnetic curvature effects, and study the turbulent spreading of particle and heat flux. Extensions to include magnetic fluctuations and collisions are discussed. Supported by the Max-Planck/Princeton Center for Plasma Physics, the SciDAC Center for the Study of Plasma Microturbulence, and DOE Contract DE-AC02-09CH11466.

  8. Global particle-in-cell simulations of plasma pressure effects on Alfvenic modes

    SciTech Connect

    Mishchenko, Alexey; Koenies, Axel; Hatzky, Roman

    2011-01-15

    Global linear gyrokinetic particle-in-cell simulations of electromagnetic modes in realistic tokamak geometry are reported. The effect of plasma pressure on Alfvenic modes is studied. It is shown that the fast-particle pressure can considerably affect the shear Alfven wave continuum structure and hence the toroidicity-induced gap in the continuum. It is also found that the energetic ions can substantially reduce the growth rate of the ballooning modes (and perhaps completely stabilize them in a certain parameter range). Ballooning modes are found to be the dominant instabilities if the bulk-plasma pressure gradient is large enough.

  9. Self-consistent modeling of multiscale gyrokinetics and transport

    NASA Astrophysics Data System (ADS)

    Parker, Jeffrey; Lodestro, Lynda; Told, Daniel; Jenko, Frank

    2016-10-01

    In the core of tokamak plasmas, a separation of timescales between turbulence and transport makes direct simulation of both processes computationally expensive. A workable, practical method to exploit the separation of timescales will be a key component in enabling the self-consistent solution of macroscopic profiles of density and temperature. We report on progress to implement the LoDestro scheme coupled with the gyrokinetic code GENE to perform for the first time coupled turbulence and transport simulations using a global gyrokinetic code. One of the advantages of the LoDestro scheme, which is essentially a method of solving an implicitly advanced nonlinear transport problem, is that it does not use Newton iteration and hence avoids difficulties that arise from calculating Jacobians or Jacobian-vector products in the presence of noisy fluxes. Instead, the implicit timestep equation is solved with an iteration scheme by representing the turbulent flux as the sum of diffusive and convective pieces, after which Picard iteration is used to converge to the self-consistent solution. Preliminary results will be presented. Prepared by LLNL under Contract DE-AC52-07NA27344.

  10. Gyrokinetic Models for Edge Plasmas*

    NASA Astrophysics Data System (ADS)

    Dimits, Andris

    2010-11-01

    The use of gyrokinetic equations for the simulation of magnetic fusion edge and scrapeoff-layer plasmas requires that the equations be valid for large relative perturbation amplitudes and, possibly, large flows. The Hamiltonian gyrokinetic theory has therefore been extended to two new orderings [1,2] that are more general than the standard ones in that they allow for potential perturbations or ExB flows of order the thermal levels. These theories both generalize and show that additional terms should have been present some related prior work. Here, full (low-β) electromagnetic toroidal equation sets are presented, and he energy conservation relations are derived using Noether's theorem in a Lagrangian variational approach. Useful subsidiary and reduced orderings are also considered that result in considerable simplification, and methods for the numerical implementation of the new terms in the equations will also be discussed. *This work was performed for US DOE by LLNL under Contract DE-AC52-07NA27344 and is part of the ESL. [4pt] [1] A.M. Dimits et al., Phys. Fluids B4, 274 (1992). [0pt] [2] A.M. Dimits, Phys. Plasmas 17, 055901 (2010).

  11. Simulating Global Climate Summits

    ERIC Educational Resources Information Center

    Vesperman, Dean P.; Haste, Turtle; Alrivy, Stéphane

    2014-01-01

    One of the most persistent and controversial issues facing the global community is climate change. With the creation of the UN Framework Convention on Climate Change (UNFCCC) in 1992 and the Kyoto Protocol (1997), the global community established some common ground on how to address this issue. However, the last several climate summits have failed…

  12. Verification and validation of linear gyrokinetic simulation of Alfvén eigenmodes in the DIII-D tokamak

    NASA Astrophysics Data System (ADS)

    Spong, D. A.; Bass, E. M.; Deng, W.; Heidbrink, W. W.; Lin, Z.; Tobias, B.; Van Zeeland, M. A.; Austin, M. E.; Domier, C. W.; Luhmann, N. C.

    2012-08-01

    A verification and validation study is carried out for a sequence of reversed shear Alfvén instability time slices. The mode frequency increases in time as the minimum (qmin) in the safety factor profile decreases. Profiles and equilibria are based upon reconstructions of DIII-D discharge (#142111) in which many such frequency up-sweeping modes were observed. Calculations of the frequency and mode structure evolution from two gyrokinetic codes, GTC and GYRO, and a gyro-Landau fluid code TAEFL are compared. The experimental mode structure of the instability was measured using time-resolved two-dimensional electron cyclotron emission imaging. The three models reproduce the frequency upsweep event within ±10% of each other, and the average of the code predictions is within ±8% of the measurements; growth rates are predicted that are consistent with the observed spectral line widths. The mode structures qualitatively agree with respect to radial location and width, dominant poloidal mode number, ballooning structure, and the up-down asymmetry, with some remaining differences in the details. Such similarities and differences between the predictions of the different models and the experimental results are a valuable part of the verification/validation process and help to guide future development of the modeling efforts.

  13. Global Feedback Simulator

    SciTech Connect

    Carlos Serrano, Lawrence Doolittle

    2015-10-29

    GFS is a simulation engine that is used for the characterization of Accelerator performance parameters based on the machine layout, configuration and noise sources. It combines extensively tested Feedback models with a longitudinal phase space tracking simulator along with the interaction between the two via beam-based feedback using a computationally efficient simulation engine. The models include beam instrumentation, considerations on loop delays for in both the R and beam-based feedback loops, as well as the ability to inject noise (both correlated and uncorrelated) at different points of the machine including a full characterization of the electron gun performance parameters.

  14. Linear global gyrokinetic simulations of toroidal Alfven eigenmodes in KSTAR plasmas

    NASA Astrophysics Data System (ADS)

    Shahzad, M.; Rizvi, H.; Ryu, C. M.

    2016-12-01

    Excitation of toroidal Alfven eigenmodes (TAEs) in KSTAR tokamak plasmas has been studied by using the GENE code. Verification and benchmark analysis are performed for Alfven eigenmodes (AEs) excited by the energetic particles (EPs) in comparison with the AEs from the GYGLES code, and excellent agreements are found. In addition, the threshold value of the EP density gradient to destabilize the TAE has been investigated. For the plasma equilibrium of KSTAR discharge (10574), TAEs of n = 2 are found to be excited by coupling of adjoining poloidal harmonics (5, 6), (6, 7), and (7, 8). The dependence of the growth rate and frequency of the TAE on the EP density gradient is examined. It is found that the threshold value of EP density gradient increases with the higher poloidal mode coupling, of which location moves outward in the radial direction. The growth rates of TAEs with higher poloidal mode numbers are smaller than those with lower poloidal mode numbers, indicating that perpendicular wavenumbers play an important role. The efficiency of the EP drive for the TAE decreases for a higher poloidal mode coupling. At a higher EP density gradient, TAEs with higher poloidal harmonics are less unstable due to the decrease in the radial extents of the modes.

  15. Global Simulation of Aviation Operations

    NASA Technical Reports Server (NTRS)

    Sridhar, Banavar; Sheth, Kapil; Ng, Hok Kwan; Morando, Alex; Li, Jinhua

    2016-01-01

    The simulation and analysis of global air traffic is limited due to a lack of simulation tools and the difficulty in accessing data sources. This paper provides a global simulation of aviation operations combining flight plans and real air traffic data with historical commercial city-pair aircraft type and schedule data and global atmospheric data. The resulting capability extends the simulation and optimization functions of NASA's Future Air Traffic Management Concept Evaluation Tool (FACET) to global scale. This new capability is used to present results on the evolution of global air traffic patterns from a concentration of traffic inside US, Europe and across the Atlantic Ocean to a more diverse traffic pattern across the globe with accelerated growth in Asia, Australia, Africa and South America. The simulation analyzes seasonal variation in the long-haul wind-optimal traffic patterns in six major regions of the world and provides potential time-savings of wind-optimal routes compared with either great circle routes or current flight-plans if available.

  16. Gyrokinetic characterization of the isotope effect in turbulent transport at the FT-2 tokamak

    NASA Astrophysics Data System (ADS)

    Niskala, P.; Gurchenko, A. D.; Gusakov, E. Z.; Altukhov, A. B.; Esipov, L. A.; Kantor, M. Yu; Kiviniemi, T. P.; Kouprienko, D.; Korpilo, T.; Lashkul, S. I.; Leerink, S.; Perevalov, A. A.; Rochford, R.

    2017-04-01

    Isotope effect allows fusion devices to perform better when heavier hydrogen isotopes are used as fuel, but the reason for this improvement is not yet understood. We present the first direct evidence of the isotope effect on particle confinement in the FT-2 tokamak and investigate it via gyrokinetic simulations. Experimental measurements for comparable hydrogen and deuterium discharges show that the particle confinement time increases by 40% for the heavier isotope species. The isotope effect on particle flux is reproduced in global and local gyrokinetic simulations. Global ELMFIRE simulations demonstrate a systemic reduction in particle fluxes across the radial range, showing a ratio of fluxes {{{Γ }}}{{H}}/{{{Γ }}}{{D}}=1.3 at the edge and {{{Γ }}}{{H}}/{{{Γ }}}{{D}}=1.4 at r/a=0.6. Local GENE simulations agree qualitatively with the result. Besides the fluctuation level, smaller scales and a favorable shift in the cross-phase between the turbulent fluctuations are found to contribute to the isotope effect in the simulations.

  17. Global Health Simulation During Residency

    PubMed Central

    Rosenman, Jane R.; Fischer, Philip R.; Arteaga, Grace M.; Hulyalkar, Manasi; Butteris, Sabrina M.; Pitt, Michael B.

    2016-01-01

    Resident participation in international health electives (IHEs) has been shown to be beneficial, yet not all residents have the opportunity to participate. We sought to determine whether participating in simulated global health cases, via the standardized Simulation Use for Global Away Rotations (SUGAR) curriculum, was useful for all pediatric residents, not merely those planning to go on an IHE. Pediatric residents in our program took part in 2 SUGAR cases and provided feedback via an online survey. Thirty-six of 40 residents participated (90%); 72% responded to the survey. Three of 10 residents not previously planning to work in resource-limited settings indicated participation in SUGAR made them more likely to do so. Nearly all residents (88%) felt SUGAR should be part of the residency curriculum. All felt better prepared for working cross-culturally. While designed to prepare trainees for work in resource-limited settings, SUGAR may be beneficial for all residents. PMID:27583300

  18. Gyrokinetic Studies of Magnetic Reconnection

    NASA Astrophysics Data System (ADS)

    Pueschel, Moritz J.; Jenko, Frank; Told, Daniel; Buechner, Joerg

    2011-10-01

    Collisionless magnetic reconnection constitutes an effective mechanism for particle acceleration in astrophysical plasmas, in particular the solar corona. In addition, it is also of relevance to fusion experiments. Gyrokinetic simulations with the GENE code are performed to explore the temporal evolution of current sheets in two-dimensional slab geometry with a strong guide field. After successful code-code benchmarking, Extensive parameter studies are performed, covering a wide range of physical scenarios. In particular, differing findings regarding the influence of the ion temperature are explained. In its nonlinear phase, the characteristics of the reconnection process depend on whether the system is driven or decaying. Decaying turbulence sees an inverse cascade, and all energy is ultimately transferred to the largest radial scale. If driven by a Krook-type term, the system develops into a turbulent, quasi-stationary state. An important quantity to investigate in nonlinear simulations is the parallel electric field which is able to accelerate particles along the background magnetic field. The spatial structure of this field is studied for the different nonlinear cases, and its amplitude reported as a function of the drive frequency.

  19. Multichannel Transport in L-mode and I-mode Plasmas at Alcator C-Mod and Comparison with Gyrokinetic Simulations

    NASA Astrophysics Data System (ADS)

    White, A. E.

    2012-10-01

    New experiments at Alcator C-Mod are challenging and expanding our understanding of electron, impurity particle, and momentum transport. Understanding these coupled transport channels is important, since alpha particles will slow down mostly on electrons in ITER intrinsically rotating, alpha-heated plasmas. Core density fluctuations are reduced in high performance (H98˜1) I-mode plasmas by up to 30% compared to L-mode. At the L-I transition, the core turbulence changes lead the edge turbulence changes. This is in contrast to observations at L-H transitions, where the edge turbulence changes lead the core turbulence changes. It is also found that L-mode and I-mode plasmas are both ITG dominant, with lower linear ITG growth rates in I-mode. TRANSP analysis indicates that core electron heat transport is reduced in I-mode compared to L-mode, with little change in ion heat transport. This indicates that significant electron heat transport is driven by ITG turbulence in L-mode. However, impurity particle transport is similar in L-mode and I-mode, suggesting that tracking changes in ITG drive alone does not describe as well the transport in this channel. Additionally, in L-mode plasmas, small < 20% changes in line averaged density lead to dramatic differences in the on-axis rotation, due to a hollowing of the radial profile at marginally lower density. This change in the shape of the rotation profile in L-mode plasmas does not appear to occur at the ITG/TEM boundary, contrary to similar phenomena seen in Ohmic plasmas. For the first time, local, long-wavelength density and electron temperature fluctuations in the core plasma (0.4 < r/a < 0.9) at C-Mod have been measured with reflectometry and correlation ECE. These new fluctuation measurements at C-Mod will allow for better testing and validation of transport models. Gyrokinetic simulations are in progress to interpret the new multichannel and multifield turbulence/transport results from C-Mod.

  20. Global Simulations of Magnetotail Reconnection

    NASA Technical Reports Server (NTRS)

    Kuznetsova, M. M.; Hesse, M.; Rastatter, L.; Toth, G.; Gombosi, T.

    2007-01-01

    There is a growing number of observational evidences of dynamic quasi-periodical magnetosphere response to continuously southward interplan etary magnetic field (IMF). However, traditional global MHD simulatio ns with magnetic reconnection supported by numerical dissipation and ad hoc anomalous resistivity driven by steady southward IMF often prod uce only quasi-steady configurations with almost stationary near-eart h neutral line. This discrepancy can be explained by the assumption that global MHD simulations significantly underestimate the reconnectio n rate in the magnetotail during substorm expansion phase. Indeed, co mparative studies of magnetic reconnection in small scale geometries demonstrated that traditional resistive MHD did not produce the fast r econnection rates observed in kinetic simulations. The major approxim ation of the traditional MHD approach is an isotropic fluid assumption) with zero off-diagonal pressure tensor components. The approximatio n, however, becomes invalid in the diffusion region around the reconn ection site where ions become unmagnetized and experience nongyrotropic behaviour. Deviation from gyrotropy in particle distribution functi on caused by kinetic effects manifests itself in nongyrotropic pressu re tensor with nonzero off-diagonal components. We use the global MHD code BATS-R-US and replace ad hoc parameters such as "critical curren t density" and "anomalous resistivity" with a physically motivated di ssipation model. The key element of the approach is to identify diffusion regions where the isotropic fluid MHD approximation is not applic able. We developed an algorithm that searches for locations of magnet otail reconnection sites. The algorithm takes advantage of block-based domain-decomposition technique employed by the BATS-R-US. Boundaries of the diffusion region around each reconnection site are estimated from the gyrotropic orbit threshold condition, where the ion gyroradius is equal to the distance to the

  1. Gyrofluid-Gyrokinetic Hybrid Turbulence Model

    NASA Astrophysics Data System (ADS)

    Dorland, William; Mandell, Noah

    2015-11-01

    Gyrofluid models of tokamak turbulence are efficient compared to gyrokinetic models, in three senses. First, it is typically easier to develop one's intuition from fluid equations than kinetic equations. Second, because gyrofluid equations are only three-dimensional (instead of 5D or 6D), simulations with gyrofluid models require less memory than kinetic simulations and can therefore more easily fit on highly-optimized computing hardware, such as graphics processors. The third advantage is a result of the first two: one can develop and test ideas quickly with gyrofluid models. The disadvantage of gyrofluid models is their potential lack of physics fidelity. In this poster, we present our attempt to take full advantage of gyrofluid models, without sacrificing physics fidelity. Our approach is encapsulated in the Gryf-X code, which is an implementation of hybrid gyrofluid/gyrokinetic equations. The key improvements that we have brought to bear are: an improved understanding of the cascade of free energy simultaneously in k⊥ and v⊥ an improved model of zonal flow physics; and an implementation of the equations on modern heterogeneous computing platforms, both as a standalone simulation tool and as a component of TRINITY (a transport modeling code for tokamaks).

  2. A basic plasma test for gyrokinetics: GDC turbulence in LAPD

    NASA Astrophysics Data System (ADS)

    Pueschel, M. J.; Rossi, G.; Told, D.; Terry, P. W.; Jenko, F.; Carter, T. A.

    2017-02-01

    Providing an important step towards validating gyrokinetics under comparatively little-explored conditions, simulations of pressure-gradient-driven plasma turbulence in the Large Plasma Device (LAPD) are compared with experimental observations. The corresponding signatures confirm the existence of a novel regime of turbulence, based on the recently-discovered gradient-driven drift coupling (GDC) instability, which is thus confirmed as a candidate mechanism for turbulence in basic, space and astrophysical plasmas. Despite the limitations of flux-tube gyrokinetics for this scenario, when accounting for box size scaling by applying a scalar factor η =6, agreement between simulations and experiment improves to within a factor of two for key observables: compressional magnetic, density, and temperature fluctuations, both in amplitude and structure. Thus, a first, strong indication is presented that the GDC instability seen in gyrokinetics appears to operate in the experiment and that the essential instability physics is present in the numerical model. Overall, the gyrokinetic framework and its numerical implementation in the Gene code therefore perform well for LAPD plasmas very different from their brethren in fusion experiments.

  3. Gyrokinetic studies on turbulence-driven and neoclassical nondiffusive toroidal-momentum transport and the effect of residual fluctuations in strong E x B shear.

    PubMed

    Wang, W X; Hahm, T S; Ethier, S; Rewoldt, G; Lee, W W; Tang, W M; Kaye, S M; Diamond, P H

    2009-01-23

    A significant inward flux of toroidal momentum is found in global gyrokinetic simulations of ion temperature gradient turbulence, leading to core plasma rotation spin-up. The underlying mechanism is identified to be the generation of residual stress due to the k parallel symmetry breaking induced by global quasistationary zonal flow shear. Simulations also show a significant off-diagonal element associated with the ion temperature gradient in the neoclassical momentum flux, while the overall neoclassical flux is small. In addition, the residual turbulence found in the presence of strong E x B flow shear may account for neoclassical-level ion heat and anomalous momentum transport widely observed in experiments.

  4. The theory of gyrokinetic turbulence: A multiple-scales approach

    NASA Astrophysics Data System (ADS)

    Plunk, Gabriel Galad

    gradient (ETG)) which rules out the possibility that ultra-fine streamers could produce significant transport, (3) a demonstration that the variation in the phasing of the primary mode (which depend on the values, of the equilibrium scale lengths of the system) effects the strength of the secondary instability, distinguishing the gyrokinetic model from a previous gyrofluid model, (4) parameter scans for the mean-scale gradient lengths which suggest a possible role of secondary instabilities in the Dimits shift and the formation of electron internal transport barriers (ITB) in tokamaks, (5) a formulation of the theory for fully gyrokinetic ions and electrons in order to explore the transition between ETG and ITG scales and (6) demonstrate the existence of a mechanism for the saturation of long-wavelength ETG modes in this ETG-ITG transition range (modes which have been demonstrated in simulations not to saturate when employing the ETG Boltzmann-ion gyrokinetic system). The final project is an application of the methods from inertial range understanding of fluid turbulence, to describe the stationary state of fully developed two-dimensional gyrokinetic turbulence. This work explores the relatively new idea of a phase-space cascade, whereby fine scales are nonlinearly generated in both position space and velocity space, and ultimately smoothed by collisional entropy production. This process constitutes the thermodynamic balance which occurs in the true steady state of a turbulent plasma, including those found in fusion devices. The results of this work include (1) exact third order relations (in analogy to Kolmogorov's four-fifths law), (2) phenomenological scaling theories for the forward and inverse cascades, (3) a detailed description of the relationship of the two-dimensional gyrokinetic cascade to the Charney-Hasegawa-Mima and two-dimensional Navier-Stokes cascades, (4) a Hankel transform formalism for treating velocity scales in the distribution function and (4) power

  5. Gyrokinetic full f analysis of electric field dynamics and poloidal velocity in the FT2-tokamak configuration

    SciTech Connect

    Leerink, S.; Heikkinen, J. A.; Janhunen, S. J.; Kiviniemi, T. P.; Nora, M.; Ogando, F.

    2008-09-15

    The ELMFIRE gyrokinetic simulation code has been used to perform full f simulations of the FT-2 tokamak. The dynamics of the radial electric field and the creation of poloidal velocity in the presence of turbulence are presented.

  6. Nonlinear theory of drift-cyclotron kinetics and the possible breakdown of gyro-kinetics

    SciTech Connect

    Waltz, R. E.; Deng Zhao

    2013-01-15

    A nonlinear theory of drift-cyclotron kinetics (termed cyclo-kinetics here) is formulated to test the breakdown of the gyro-kinetic approximations. Six dimensional cyclo-kinetics can be regarded as an extension of five dimensional gyro-kinetics to include high-frequency cyclotron waves, which can interrupt the low-frequency gyro-averaging in the (sixth velocity grid) gyro-phase angle. Nonlinear cyclo-kinetics has no limit on the amplitude of the perturbations. Formally, there is no gyro-averaging when all cyclotron (gyro-phase angle) harmonics of the perturbed distribution function (delta-f) are retained. Retaining only the (low frequency) zeroth cyclotron harmonic in cyclo-kinetics recovers both linear and nonlinear gyro-kinetics. Simple recipes are given for converting continuum nonlinear delta-f gyro-kinetic transport simulation codes to cyclo-kinetics codes by retaining (at least some) higher cyclotron harmonics.

  7. Nonlinear gyrokinetic theory for finite-BETA plasmas

    SciTech Connect

    Hahm, T.S.; Lee, W.W.; Brizard, A.

    1988-02-01

    A self-consistent and energy-conserving set of nonlinear gyrokinetic equations, consisting of the averaged Vlasov and Maxwell's equations for finite-..beta.. plasmas, is derived. The method utilized in the present investigation is based on the Hamiltonian formalism and Lie transformation. The resulting formation is valid for arbitrary values of k/perpendicular//rho//sub i/ and, therefore, is most suitable for studying linear and nonlinear evolution of microinstabilities in tokamak plasmas as well as other areas of plasma physics where the finite Larmor radius effects are important. Because the underlying Hamiltonian structure is preserved in the present formalism, these equations are directly applicable to numerical studies based on the existing gyrokinetic particle simulation techniques. 31 refs.

  8. Global simulation of field-reversed configuration using fully kinetic ion and drift kinetic electron

    NASA Astrophysics Data System (ADS)

    Lau, Calvin; Fulton, Daniel; Kuley, Animesh; Bao, Jian; Lin, Zhihong; Binderbauer, Michael; Tajima, Toshiki; Schmitz, Lothar; the TAE Team Team

    2016-10-01

    In the last several years, the C-2/C-2U advanced beam-driven field-reversed configuration (FRC) experiments at Tri Alpha Energy have progressed to consistent, reproducible plasma lifetimes of 10+ ms, i.e. FRCs have reached transport limited regimes. In FRC geometry, the thermal ion gyroradius is on the order of the size of the plasma near the magnetic null-point. Fast ion orbits intersect both the FRC core and the scrape-off layer (SOL) regions. Previous local simulations of electrostatic drift-wave instabilities using the Gyrokinetic Toroidal Code (GTC) find the core to be robustly stable with driftwave instability only in the SOL at frequencies approaching the ion cyclotron frequency. Therefore, FRC transport studies require fully kinetic ion simulations with cross-separatrix coupling between the core and SOL. Here we report progress of such global simulations using fully kinetic ions and drift kinetic electrons, including the implementation of the Boris push scheme for cyclotron motion and cylindrical coordinates for the separatrix. Supported by the Norman Rostoker Fellowship.

  9. SciDAC Center for Plasma Edge Simulation

    SciTech Connect

    Lin, Zhihong

    2013-12-17

    This project with a total funding of $592,998 for six years has partially supported four postdoctoral researchers at the University of California, Irvine (UCI). The UCI team has formulated electrostatic and electromagnetic global gyrokinetic particle simulation models with kinetic electrons, implemented these models in the edge code XGC1, performed benchmark between GTC and XGC1, developed computational tools for gyrokinetic particle simulation in tokamak edge geometry, and initiated preparatory study of edge turbulence using GTC code. The research results has been published in 12 papers and presented at many international and national conferences.

  10. Confronting Global Issues: A Multipurpose IR Simulation

    ERIC Educational Resources Information Center

    Shellman, Stephen M.; Turan, Kursad

    2006-01-01

    This article describes an international relations simulation that focuses on threats of transnational insurgent organizations, the future of the Iraqi regime, and the effect of globalization on foreign policies. It contains both the Simulation Director's Guide and the Participant's Guide. The guides explain the steps taken to run the simulation…

  11. Differential formulation of the gyrokinetic Landau operator

    NASA Astrophysics Data System (ADS)

    Hirvijoki, Eero; Brizard, Alain J.; Pfefferlé, David

    2017-02-01

    Subsequent to the recent rigorous derivation of an energetically consistent gyrokinetic collision operator in the so-called Landau representation, this paper investigates the possibility of finding a differential formulation of the gyrokinetic Landau collision operator. It is observed that, while a differential formulation is possible in the gyrokinetic phase space, reduction of the resulting system of partial differential equations to five dimensions via gyroaveraging poses a challenge. Based on the present work, it is likely that the gyrocentre analogues of the Rosenbluth-MacDonald-Judd potential functions must be kept gyroangle dependent.

  12. Global Positioning System Simulator Field Operational Procedures

    NASA Technical Reports Server (NTRS)

    Kizhner, Semion; Quinn, David A.; Day, John H. (Technical Monitor)

    2002-01-01

    Global Positioning System (GPS) simulation is an important activity in the development or qualification of GPS signal receivers for space flight. Because a GPS simulator is a critical resource it is highly desirable to develop a set of field operational procedures to supplement the basic procedures provided by most simulator vendors. Validated field procedures allow better utilization of the GPS simulator in the development of new test scenarios and simulation operations. These procedures expedite simulation scenario development while resulting in scenarios that are more representative of the true design, as well as enabling construction of more complex simulations than previously possible, for example, spacecraft maneuvers. One difficulty in the development of a simulation scenario is specifying various modes of test vehicle motion and associated maneuvers requiring that a user specify some (but not all) of a few closely related simulation parameters. Currently this can only be done by trial and error. A stand-alone procedure that implements the simulator maneuver motion equations and solves for the motion profile transient times, jerk and acceleration would be of considerable value. Another procedure would permit the specification of some configuration parameters that would determine the simulated GPS signal composition. The resulting signal navigation message, for example, would force the receiver under test to use only the intended C-code component of the simulated GPS signal. A representative class of GPS simulation-related field operational procedures is described in this paper. These procedures were developed and used in support of GPS integration and testing for many successful spacecraft missions such as SAC-A, EO-1, AMSAT, VCL, SeaStar, sounding rockets, and by using the industry standard Spirent Global Simulation Systems Incorporated (GSSI) STR series simulators.

  13. Global magnetohydrodynamic simulations of the magnetosphere

    NASA Astrophysics Data System (ADS)

    Walker, Raymond J.; Ogino, Tatsuki

    1989-04-01

    The use of a global MHD simulation to study the magnetospheric configuration is demonstrated by reviewing some of the results obtained with the model of Ogino (1986). The steady-state configuration of the magnetosphere in the absence of an IMF is considered, and it is demonstrated that this configuration is changed when a northward or southward IMF is introduced. It is noted that the magnetosphere is very dynamic, and that, since global MHD simulations are intrinsically time-dependent, they offer the possibility of modeling the time sequence of events in the magnetosphere. Results are presented from a calculation in which a magnetospheric substrom is modeled.

  14. Global magnetohydrodynamic simulations of the magnetosphere

    NASA Technical Reports Server (NTRS)

    Walker, Raymond J.; Ogino, Tatsuki

    1989-01-01

    The use of a global MHD simulation to study the magnetospheric configuration is demonstrated by reviewing some of the results obtained with the model of Ogino (1986). The steady-state configuration of the magnetosphere in the absence of an IMF is considered, and it is demonstrated that this configuration is changed when a northward or southward IMF is introduced. It is noted that the magnetosphere is very dynamic, and that, since global MHD simulations are intrinsically time-dependent, they offer the possibility of modeling the time sequence of events in the magnetosphere. Results are presented from a calculation in which a magnetospheric substrom is modeled.

  15. A Short Introduction to General Gyrokinetic Theory

    SciTech Connect

    H. Qin

    2005-02-14

    Interesting plasmas in the laboratory and space are magnetized. General gyrokinetic theory is about a symmetry, gyro-symmetry, in the Vlasov-Maxwell system for magnetized plasmas. The most general gyrokinetic theory can be geometrically formulated. First, the coordinate-free, geometric Vlasov-Maxwell equations are developed in the 7-D phase space, which is defined as a fiber bundle over the space-time. The Poincar{copyright}-Cartan-Einstein 1-form pullbacked onto the 7-D phase space determines particles' worldlines in the phase space, and realizes the momentum integrals in kinetic theory as fiber integrals. The infinite small generator of the gyro-symmetry is then asymptotically constructed as the base for the gyrophase coordinate of the gyrocenter coordinate system. This is accomplished by applying the Lie coordinate perturbation method to the Poincar{copyright}-Cartan-Einstein 1-form, which also generates the most relaxed condition under which the gyro-symmetry still exists. General gyrokinetic Vlasov-Maxwell equations are then developed as the Vlasov-Maxwell equations in the gyrocenter coordinate system, rather than a set of new equations. Since the general gyrokinetic system-developed is geometrically the same as the Vlasov-Maxwell equations, all the coordinate independent properties of the Vlasov-Maxwell equations, such as energy conservation, momentum conservation, and Liouville volume conservation, are automatically carried over to the general gyrokinetic system. The pullback transformation associated with the coordinate transformation is shown to be an indispensable part of the general gyrokinetic Vlasov-Maxwell equations. Without this vital element, a number of prominent physics features, such as the presence of the compressional Alfven wave and a proper description of the gyrokinetic equilibrium, cannot be readily recovered. Three examples of applications of the general gyrokinetic theory developed in the areas of plasma equilibrium and plasma waves are

  16. A gyrokinetic one-dimensional scrape-off layer model of an edge-localized mode heat pulse

    NASA Astrophysics Data System (ADS)

    Shi, E. L.; Hakim, A. H.; Hammett, G. W.

    2015-02-01

    An electrostatic gyrokinetic-based model is applied to simulate parallel plasma transport in the scrape-off layer to a divertor plate. The authors focus on a test problem that has been studied previously, using parameters chosen to model a heat pulse driven by an edge-localized mode in JET. Previous work has used direct particle-in-cell equations with full dynamics, or Vlasov or fluid equations with only parallel dynamics. With the use of the gyrokinetic quasineutrality equation and logical sheath boundary conditions, spatial and temporal resolution requirements are no longer set by the electron Debye length and plasma frequency, respectively. This test problem also helps illustrate some of the physics contained in the Hamiltonian form of the gyrokinetic equations and some of the numerical challenges in developing an edge gyrokinetic code.

  17. A gyrokinetic one-dimensional scrape-off layer model of an edge-localized mode heat pulse

    SciTech Connect

    Shi, E. L.; Hakim, A. H.; Hammett, G. W.

    2015-02-15

    An electrostatic gyrokinetic-based model is applied to simulate parallel plasma transport in the scrape-off layer to a divertor plate. The authors focus on a test problem that has been studied previously, using parameters chosen to model a heat pulse driven by an edge-localized mode in JET. Previous work has used direct particle-in-cell equations with full dynamics, or Vlasov or fluid equations with only parallel dynamics. With the use of the gyrokinetic quasineutrality equation and logical sheath boundary conditions, spatial and temporal resolution requirements are no longer set by the electron Debye length and plasma frequency, respectively. This test problem also helps illustrate some of the physics contained in the Hamiltonian form of the gyrokinetic equations and some of the numerical challenges in developing an edge gyrokinetic code.

  18. Analysis and compression of six-dimensional gyrokinetic datasets using higher order singular value decomposition

    SciTech Connect

    Hatch, David R.; Del-Castillo-Negrete, Diego B; Terry, P.W.

    2012-01-01

    Higher order singular value decomposition (HOSVD) is explored as a tool for analyzing and compressing gyrokinetic data. An efficient numerical implementation of an HOSVD algorithm is described. HOSVD is used to analyze the full six-dimensional (three spatial, two velocity space, and time dimensions) gyrocenter distribution function from gyrokinetic simulations of ion temperature gradient, electron temperature gradient, and trapped electron mode driven turbulence. The HOSVD eigenvalues for the velocity space coordinates decay very rapidly, indicating that only a few structures in velocity space can capture the most important dynamics. In almost all of the cases studied, HOSVD extracts parallel velocity space structures which are very similar to orthogonal polynomials. HOSVD is also used to compress gyrokinetic datasets, an application in which it is shown to significantly outperform the more commonly used singular value decomposition. It is shown that the effectiveness of the HOSVD compression improves as the dimensionality of the dataset increases. (C) 2012 Elsevier Inc. All rights reserved.

  19. Developing Scientific Literacy Skills through Interdisciplinary, Technology-Based Global Simulations: GlobalEd 2

    ERIC Educational Resources Information Center

    Lawless, Kimberly A.; Brown, Scott W.

    2015-01-01

    GlobalEd 2 (GE2) is a set of technology-mediated, problem-based learning (PBL) simulations for middle-grade students, that capitalises on the multidisciplinary nature of the social sciences as an expanded curricular space for students to learn and apply scientific literacies and concepts, while simultaneously also enriching their understanding of…

  20. Global kinetic ballooning mode simulations in BOUT++

    NASA Astrophysics Data System (ADS)

    Ma, C. H.; Xu, X. Q.

    2017-01-01

    We report on simulation results of a 3+1 gyro-Landau-fluid (GLF) model in BOUT++ framework, which contributes to increasing the physics understanding of the edge turbulence. We find that there is no second stability region of kinetic ballooning modes (KBM) in the concentric circular geometry. The first unstable β of KBM decreases below the ideal ballooning mode threshold with increasing {ηi} . In order to study the KBM in the real tokamak equilibrium, we find that the approximation of shifted circular geometry (β \\ll {{\\varepsilon}2} ) is not valid for a high β global equilibrium near the second stability region of KBM. Thus we generate a series of real equilibria from a global equilibrium solver CORSICA, including both Shafranov shift and elongation effects, but not including bootstrap current. In these real equilibria, the second stability region of KBM are observed in our global linear simulations. The most unstable mode for different β are the same while the mode number spectrum near the second stability region is wider than the case near the first stability region. The nonlinear simulations show that the energy loss of an ELM keeps increasing with β, because the linear drive of the turbulence remains strong for the case near the second stability region during profile evolution.

  1. Search for the Missing L-mode Edge Transport and Possible Breakdown of Gyrokinetics

    NASA Astrophysics Data System (ADS)

    Waltz, R. E.

    2012-10-01

    While GYRO simulations of typical core (0 < r/a < 0.7) DIII-D L-modes seems to be in good agreement with experiment, simulated low-k (kθρs< 1) transport and turbulence intensity is more than 5-fold lower than experimentally inferred levels in the near edge L-mode (r/a=0.7-0.95) DIII-D shot 128913 [1]. Global edge slice GYRO simulations of this and the well-studied discharge 101391 [2] are presented here to document the shortfall. TGLF transport code simulations over a large L-mode database indicate this short fall is not atypical so that L-mode edges transit to H-like pedestal profiles contrary to experiment. High edge e-i collisionality stabilizes the TEM modes so that diffusivities (χ) decrease like T^7/2/n to the cold edge. The very high magnetic shear and density gradients stabilize the ITG despite the very high temperature gradient drive and high q. High-k ETG can make-up for the shortfall in the electron but increases ion transport very little. Near L-edge transport is highly local. Focusing on local simulations at r/a=0.9, the ion channel short fall can exceed 10-fold. An artificial 10-fold increase in collisionality is needed to reach the expected resistive g-mode scaling with χ increasing like nT-1/2. Identical GYRO drift kinetic ion simulations (suppressing the gyroaverage) are close to experiment levels suggesting a possible breakdown of low-frequency gyrokinetics. Formulation of a nonlinear theory of 6D drift-cyclotron kinetics following the fast time scale of the gyrophase to test the breakdown of 5D gyrokinetics with reduced model simulations is presented. 6pt [1] C. Holland, A.E. White, et al., Phys. Plasmas 16, 052301 (2009). [2] R.E. Waltz, J. Candy, C.C. Petty, Phys. Plasmas 13, 072304 (2006).

  2. Gyrokinetic theory and computational methods for electromagnetic perturbations in tokamaks

    NASA Astrophysics Data System (ADS)

    Qin, Hong

    A general gyrokinetic formalism and appropriate computational methods have been developed for electromagnetic perturbations in toroidal plasmas. This formalism and associated numerical code represent the first self-consistent, comprehensive, fully kinetic model for treating both magnetohydrodynamic (MHD) instabilities and electromagnetic drift waves. The gyrokinetic system of equation is derived by phase- space Lagrangian Lie perturbation methods which enable applications to modes with arbitrary wavelength. An important component missing from previous electromagnetic gyrokinetic theories, the gyrokinetic perpendicular dynamics, is identified and developed in the present analysis. This is accomplished by introducing a new ``distribution function'' and an associated governing gyrokinetic equation. Consequently, the compressional Alfvén waves and cyclotron waves can be systematically treated. The new insights into the gyrokinetic perpendicular dynamics uncovered here clarify the understanding of the gyrokinetic approach-the real spirit of the gyrokinetic reduction is to decouple the gyromotion from the guiding center orbital motion, instead of averaging it out. The gyrokinetic perpendicular dynamics is in fact essential to the recovery of the MHD model from a fully kinetic derivation. In particular, it serves to generalize, in gyrokinetic framework, Spitzer's solution of the fluid/particle paradox to a broader regime of applicability. The gyrokinetic system is also shown to be reducible to a simpler form to deal with shear Alfvén waves. This consists of an appropriate form of the gyrokinetic equation governing the distribution function, the gyrokinetic Poisson equation, and a newly derived gyrokinetic moment equation. If all of the kinetic effects are neglected, the gyrokinetic moment equation is shown to recover the ideal MHD equation for shear Alfvén modes. In addition, a gyrokinetic Ohm's law, including both the perpendicular and the parallel components, is

  3. Electromagnetic nonlinear gyrokinetics with polarization drift

    SciTech Connect

    Duthoit, F.-X.; Hahm, T. S.; Wang, Lu

    2014-08-15

    A set of new nonlinear electromagnetic gyrokinetic Vlasov equation with polarization drift and gyrokinetic Maxwell equations is systematically derived by using the Lie-transform perturbation method in toroidal geometry. For the first time, we recover the drift-kinetic expression for parallel acceleration [R. M. Kulsrud, in Basic Plasma Physics, edited by A. A. Galeev and R. N. Sudan (North-Holland, Amsterdam, 1983)] from the nonlinear gyrokinetic equations, thereby bridging a gap between the two formulations. This formalism should be useful in addressing nonlinear ion Compton scattering of intermediate-mode-number toroidal Alfvén eigenmodes for which the polarization current nonlinearity [T. S. Hahm and L. Chen, Phys. Rev. Lett. 74, 266 (1995)] and the usual finite Larmor radius effects should compete.

  4. Electromagnetic nonlinear gyrokinetics with polarization drift

    NASA Astrophysics Data System (ADS)

    Duthoit, F.-X.; Hahm, T. S.; Wang, Lu

    2014-08-01

    A set of new nonlinear electromagnetic gyrokinetic Vlasov equation with polarization drift and gyrokinetic Maxwell equations is systematically derived by using the Lie-transform perturbation method in toroidal geometry. For the first time, we recover the drift-kinetic expression for parallel acceleration [R. M. Kulsrud, in Basic Plasma Physics, edited by A. A. Galeev and R. N. Sudan (North-Holland, Amsterdam, 1983)] from the nonlinear gyrokinetic equations, thereby bridging a gap between the two formulations. This formalism should be useful in addressing nonlinear ion Compton scattering of intermediate-mode-number toroidal Alfvén eigenmodes for which the polarization current nonlinearity [T. S. Hahm and L. Chen, Phys. Rev. Lett. 74, 266 (1995)] and the usual finite Larmor radius effects should compete.

  5. A study of self organized criticality in ion temperature gradient mode driven gyrokinetic turbulence

    SciTech Connect

    Mavridis, M.; Isliker, H.; Vlahos, L.; Görler, T.; Jenko, F.; Told, D.

    2014-10-15

    An investigation on the characteristics of self organized criticality (Soc) in ITG mode driven turbulence is made, with the use of various statistical tools (histograms, power spectra, Hurst exponents estimated with the rescaled range analysis, and the structure function method). For this purpose, local non-linear gyrokinetic simulations of the cyclone base case scenario are performed with the GENE software package. Although most authors concentrate on global simulations, which seem to be a better choice for such an investigation, we use local simulations in an attempt to study the locally underlying mechanisms of Soc. We also study the structural properties of radially extended structures, with several tools (fractal dimension estimate, cluster analysis, and two dimensional autocorrelation function), in order to explore whether they can be characterized as avalanches. We find that, for large enough driving temperature gradients, the local simulations exhibit most of the features of Soc, with the exception of the probability distribution of observables, which show a tail, yet they are not of power-law form. The radial structures have the same radial extent at all temperature gradients examined; radial motion (transport) though appears only at large temperature gradients, in which case the radial structures can be interpreted as avalanches.

  6. Global magnetohydrodynamic simulations of the magnetosphere

    SciTech Connect

    Walker, R.J.; Ogino, T.

    1989-04-01

    Global magnetohydrodynamic (MHD) simulations of the interaction between the solar wind and a planetary magnetosphere enable us to calculate self-consistently the time-dependent three-dimensional configuration of the magnetosphere. To demonstrate the application of a global MHD model to the magnetosphere, the authors have calculated the dependence of the magnetospheric configuration and polar-cap structure on the north-south component of the interplanetary magnetic field (IMF). First, they modeled the magnetosphere in the absence of an IMF and found a slowly evolving system in which steady convection leads to slow reconnection in the plasma sheet. When a uniform northward IMF was initially imposed throughout the system the plasma sheet thickened in a small region near the noon-midnight meridian and extended into the tail lobes. When viewed from the polar cap, this appears as a narrow finger of closed field lines extending into the polar cap. The plasma sheet thickening is caused by reconnection on the nightside magnetopause. This plasma sheet extension becomes less pronounced when the northward IMF enters the simulation box with the solar wind. For both cases the convection near midnight is toward the sun, and region-1-type field-aligned currents appear on both sides of the plasma sheet extension. For northward IMF the resulting magnetospheric configuration approached a quasi-steady state in which stable magnetospheric convection was maintained. The simulation results indicate that the presence of a northward B in the plasma sheet stabilizes the tail.

  7. Gyrokinetic studies of core turbulence features in ASDEX Upgrade H-mode plasmas

    SciTech Connect

    Navarro, A. Bañón Told, D.; Happel, T.; Görler, T.; Abiteboul, J.; Bustos, A.; Doerk, H.; Jenko, F.

    2015-04-15

    Gyrokinetic validation studies are crucial for developing confidence in the model incorporated in numerical simulations and thus improving their predictive capabilities. As one step in this direction, we simulate an ASDEX Upgrade discharge with the GENE code, and analyze various fluctuating quantities and compare them to experimental measurements. The approach taken is the following. First, linear simulations are performed in order to determine the turbulence regime. Second, the heat fluxes in nonlinear simulations are matched to experimental fluxes by varying the logarithmic ion temperature gradient within the expected experimental error bars. Finally, the dependence of various quantities with respect to the ion temperature gradient is analyzed in detail. It is found that density and temperature fluctuations can vary significantly with small changes in this parameter, thus making comparisons with experiments very sensitive to uncertainties in the experimental profiles. However, cross-phases are more robust, indicating that they are better observables for comparisons between gyrokinetic simulations and experimental measurements.

  8. Toroidal Alfvén eigenmodes with nonlinear gyrokinetic and fluid hybrid models

    NASA Astrophysics Data System (ADS)

    Cole, M. D. J.; Biancalani, A.; Bottino, A.; Kleiber, R.; Könies, A.; Mishchenko, A.

    2017-02-01

    Alfvén eigenmodes may be important in driving fast particle transport in magnetic confinement fusion devices, with potentially deleterious results. To explain and predict this behaviour, numerical simulations are necessary. In order to predict transport, modes must be simulated through to their nonlinear saturated state. In this work, the first simulations of non-linear wave-particle interaction between an energetic particle population and a Toroidal Alfvén Eigenmode are performed in which fluctuations responding self-consistently to modification of the fast particle profile are calculated with gyrokinetic treatment of all plasma species. Results from two such gyrokinetic codes are compared with new results from non-perturbative and perturbative fluid-gyrokinetic hybrid codes. There is a power-law relationship between the saturated magnetic perturbation amplitude, δB/B0, and the linear mode growth rate, γL. All models show a transition from a higher to a lower exponent regime with increasing γL. Measured values of the higher exponent from different codes fall in a range between 1.45 and 1.79, while the lower exponent falls in a range between 0.47 and 0.79. There is a consistent difference of 1.0 between the higher and lower exponents independent of the model. The absolute level of saturated δB/B0 is determined by the damping rate. In the fluid-gyrokinetic hybrid codes, an ad-hoc damping is applied, while in the gyrokinetic case the measured damping is consistent with the estimated rate of physical electron Landau damping.

  9. Clarifications to the limitations of the s-{alpha} equilibrium model for gyrokinetic computations of turbulence

    SciTech Connect

    Lapillonne, X.; Brunner, S.; Dannert, T.; Jolliet, S.; Marinoni, A.; Villard, L.; Goerler, T.; Jenko, F.; Merz, F.

    2009-03-15

    In the context of gyrokinetic flux-tube simulations of microturbulence in magnetized toroidal plasmas, different treatments of the magnetic equilibrium are examined. Considering the Cyclone DIII-D base case parameter set [Dimits et al., Phys. Plasmas 7, 969 (2000)], significant differences in the linear growth rates, the linear and nonlinear critical temperature gradients, and the nonlinear ion heat diffusivities are observed between results obtained using either an s-{alpha} or a magnetohydrodynamic (MHD) equilibrium. Similar disagreements have been reported previously [Redd et al., Phys. Plasmas 6, 1162 (1999)]. In this paper it is shown that these differences result primarily from the approximation made in the standard implementation of the s-{alpha} model, in which the straight field line angle is identified to the poloidal angle, leading to inconsistencies of order {epsilon} ({epsilon}=a/R is the inverse aspect ratio, a the minor radius and R the major radius). An equilibrium model with concentric, circular flux surfaces and a correct treatment of the straight field line angle gives results very close to those using a finite {epsilon}, low {beta} MHD equilibrium. Such detailed investigation of the equilibrium implementation is of particular interest when comparing flux tube and global codes. It is indeed shown here that previously reported agreements between local and global simulations in fact result from the order {epsilon} inconsistencies in the s-{alpha} model, coincidentally compensating finite {rho}{sup *} effects in the global calculations, where {rho}{sup *}={rho}{sub s}/a with {rho}{sub s} the ion sound Larmor radius. True convergence between local and global simulations is finally obtained by correct treatment of the geometry in both cases, and considering the appropriate {rho}{sup *}{yields}0 limit in the latter case.

  10. Gyrokinetic modelling of stationary electron and impurity profiles in tokamaks

    SciTech Connect

    Skyman, A. Tegnered, D. Nordman, H. Strand, P.

    2014-09-15

    Particle transport due to Ion Temperature Gradient (ITG)/Trapped Electron Mode (TEM) turbulence is investigated using the gyrokinetic code GENE. Both a reduced quasilinear treatment and nonlinear simulations are performed for typical tokamak parameters corresponding to ITG dominated turbulence. The gyrokinetic results are compared and contrasted with results from a computationally efficient fluid model. A selfconsistent treatment is used, where the stationary local profiles are calculated corresponding to zero particle flux simultaneously for electrons and trace impurities. The scaling of the stationary profiles with magnetic shear, safety factor, electron-to-ion temperature ratio, collisionality, toroidal sheared rotation, plasma β, triangularity, and elongation is investigated. In addition, the effect of different main ion mass on the zero flux condition is discussed. The electron density gradient can significantly affect the stationary impurity profile scaling. It is therefore expected that a selfconsistent treatment will yield results more comparable to experimental results for parameter scans where the stationary background density profile is sensitive. This is shown to be the case in scans over magnetic shear, collisionality, elongation, and temperature ratio, for which the simultaneous zero flux electron and impurity profiles are calculated. A slight asymmetry between hydrogen, deuterium, and tritium with respect to profile peaking is obtained, in particular, for scans in collisionality and temperature ratio.

  11. Gyrokinetic linear stability analysis of NSTX L-mode plasmas

    NASA Astrophysics Data System (ADS)

    Han, Ke; Ren, Yang

    2016-10-01

    NSTX offered unique opportunities in studying transport and turbulence with low aspect ratio, strong plasma shaping and strong E ×B shear. NSTX L-mode plasmas have some favorable properties to facilitate the study of the relation between microturbulence and thermal transport: easier to obtain stationary profiles; easier to maintain MHD quiescence; no complications from edge transport barrier. Studies of NSTX RF/NBI-heated L-mode plasmas have provided new insight into the role of ion and electron-scale turbulence in driving anomalous transport. Here we present linear stability analysis of some NSTX L-mode plasmas with GS2 gyrokinetic code. GS2 is an initial value gyrokinetic code which, in its linear mode, finds the fastest growing mode for a given pair of poloidal and radial wavenumbers. The linear simulations used local Miller equilibria and plasma parameters derived from measured experimental profiles with electromagnetic effects, electron and ion collisions and carbon impurity. The work is supported by DOE, China Scholarship Council, the Natural Science Foundation of China (61402138) and the Natural Science Foundation of Heilongjiang Province (E201452).

  12. Global Cloud Liquid Water Path Simulations(.

    NASA Astrophysics Data System (ADS)

    Lemus, Lilia; Rikus, Lawrie; Martin, C.; Platt, R.

    1997-01-01

    A new parameterization of cloud liquid water and ice content has been included in the Bureau of Meteorology Global Assimilation and Prediction System. The cloud liquid water content is derived from the mean cloud temperatures in the model using an empirical relationship based on observations. The results from perpetual January and July simulations are presented and show that the total cloud water path steadily decreases toward high latitudes, with two relative maxima at midlatitudes and a peak at low latitudes. To validate the scheme, the simulated fields need to be processed to produce liquid water paths that can be directly compared with the corresponding field derived from Special Sensor Microwave/Imager (SSM/I) data. This requires the identification of cloud ice water content within the parameterization and a prescription to account for the treatment of strongly precipitating subgrid-scale cloud. The resultant cloud liquid water paths agree qualitatively with the SSM/I data but show some systematic errors that are attributed to corresponding errors in the model's simulation of cloud amounts. Given that a more quantitative validation requires substantial improvement in the model's diagnostic cloud scheme, the comparison with the SSM/I data indicates that the cloud water path, derived from the cloud liquid water content parameterization introduced in this paper, is consistent with the observations and can be usefully incorporated in the prediction system.

  13. Adaptive wavelet simulation of global ocean dynamics

    NASA Astrophysics Data System (ADS)

    Kevlahan, N. K.-R.; Dubos, T.; Aechtner, M.

    2015-07-01

    In order to easily enforce solid-wall boundary conditions in the presence of complex coastlines, we propose a new mass and energy conserving Brinkman penalization for the rotating shallow water equations. This penalization does not lead to higher wave speeds in the solid region. The error estimates for the penalization are derived analytically and verified numerically for linearized one dimensional equations. The penalization is implemented in a conservative dynamically adaptive wavelet method for the rotating shallow water equations on the sphere with bathymetry and coastline data from NOAA's ETOPO1 database. This code could form the dynamical core for a future global ocean model. The potential of the dynamically adaptive ocean model is illustrated by using it to simulate the 2004 Indonesian tsunami and wind-driven gyres.

  14. The nonlinear gyro-kinetic flux tube code GKW

    NASA Astrophysics Data System (ADS)

    Peeters, A. G.; Camenen, Y.; Casson, F. J.; Hornsby, W. A.; Snodin, A. P.; Strintzi, D.; Szepesi, G.

    2009-12-01

    A new nonlinear gyro-kinetic flux tube code (GKW) for the simulation of micro instabilities and turbulence in magnetic confinement plasmas is presented in this paper. The code incorporates all physics effects that can be expected from a state of the art gyro-kinetic simulation code in the local limit: kinetic electrons, electromagnetic effects, collisions, full general geometry with a coupling to a MHD equilibrium code, and E×B shearing. In addition the physics of plasma rotation has been implemented through a formulation of the gyro-kinetic equation in the co-moving system. The gyro-kinetic model is five-dimensional and requires a massive parallel approach. GKW has been parallelised using MPI and scales well up to 8192+ cores. The paper presents the set of equations solved, the numerical methods, the code structure, and the essential benchmarks. Program summaryProgram title: GKW Catalogue identifier: AEES_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEES_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: GNU GPL v3 No. of lines in distributed program, including test data, etc.: 29 998 No. of bytes in distributed program, including test data, etc.: 206 943 Distribution format: tar.gz Programming language: Fortran 95 Computer: Not computer specific Operating system: Any for which a Fortran 95 compiler is available Has the code been vectorised or parallelised?: Yes. The program can efficiently utilise 8192+ processors, depending on problem and available computer. 128 processors is reasonable for a typical nonlinear kinetic run on the latest x86-64 machines. RAM:˜128 MB-1 GB for a linear run; 25 GB for typical nonlinear kinetic run (30 million grid points) Classification: 19.8, 19.9, 19.11 External routines: None required, although the functionality of the program is somewhat limited without a MPI implementation (preferably MPI-2) and the FFTW3 library. Nature of problem: Five

  15. Comparison of two-fluid and gyrokinetic models for kinetic Alfvén waves in solar and space plasmas

    SciTech Connect

    Yang, L.; Wu, D. J.; Wang, S. J.; Lee, L. C.

    2014-09-01

    An analytical comparative study of a two-fluid and a gyrokinetic model of kinetic Alfvén waves (KAWs) is presented for various solar and space plasma environments. Based on the linear KAW dispersion relation for gyrokinetics (Howes et al. 2006), the wave group velocity and electromagnetic polarizations are obtained analytically. Then the gyrokinetic wave properties are compared with those of the two-fluid model. The results show that both models agree well with each other not only in the long wavelength regime (>> the ion gyroradius ρ {sub i}) for all cases considered, but also in wavelengths ∼ρ {sub i} and <<ρ {sub i} (still much larger than the electron gyroscale) for a moderate or low (≲ 1) and a high (>>1) ion/electron temperature ratio T {sub 0i}/T {sub 0e}, respectively. However, the fluid model calculations deviate strongly from the gyrokinetic model at scales <ρ {sub i} for a relatively low T {sub 0i}/T {sub 0e} due to the electron gyroradius effect. Meanwhile, the plasma β {sub i} can make the gyrokinetic dispersion relation of KAWs become complex and sometimes have an oscillation-like structure. With the inherent simplicity of the fluid theory, these results may improve our understanding of the applicability of the two-fluid model, and may have important implications for computer simulation studies of KAWs in the solar and space plasma surroundings.

  16. Gyrokinetic theory of the screw pinch

    NASA Astrophysics Data System (ADS)

    Stéfant, Robert J.

    1989-06-01

    The gyrokinetic differential equation for waves propagating in a hot collisionless current-carrying plasma is derived in cylindrical geometry. It is shown that the averaging of the wave electric field over the ion Larmor circle leads to a transcendental differential equation (d.e.) of infinite order in the radial derivative. This reduces to a d.e. of sixth order when the scale length of the plasma inhomogeneity Ln is greater than the ion gyroradius ρi by a factor (M/m)1/2, where M and m are, respectively, the ion and electron mass. This sixth-order d.e. describes the properties of the two (compressional and torsional) Alfvén modes and the ion acoustic mode. When Ln <(M/m)1/2ρi, the plasma can only support modes of the magnetokinetic (short wavelength) type. In the absence of a finite Larmor radius (FLR) effect, shear, and equilibrium current, we find that the correct equation to start with is the Hain and Lust [Z. Naturforsch. A 13, 936 (1958)] d.e. of second order that is singular at the Alfvén resonance layer (ARL). The ARL behaves in that case like a Budden absorption layer that traps the global Alfvén eigenmodes (GAEM) inside the plasma cavity where they are damped by transit time magnetic pumping (TTMP). The logarithmic singularity does not disappear with the introduction of the FLR effect in the Hain and Lust d.e., but only with the TTMP damping term. There is no mode conversion between the fast magnetosonic mode and the shear or magnetokinetic mode at the ARL or anywhere in the plasma. In the presence of shear and equilibrium current, the correct equation to use is a d.e. of fourth (or greater) order whose solutions descibe the shear Alfvén mode in the long wavelength limit or the magnetokinetic mode at shorter wavelengths. In the true magnetohydrodynamic (MHD) limit, both modes become degenerate. It is shown that the slow Alfvén eigenmodes are (almost) completely decoupled from the fast magnetosonic wave and therefore the growth rates show no

  17. A gyrokinetic one-dimensional scrape-off layer model of an edge-localized mode heat pulse

    DOE PAGES

    Shi, E. L.; Hakim, A. H.; Hammett, G. W.

    2015-02-03

    An electrostatic gyrokinetic-based model is applied to simulate parallel plasma transport in the scrape-off layer to a divertor plate. We focus on a test problem that has been studied previously, using parameters chosen to model a heat pulse driven by an edge-localized mode in JET. Previous work has used direct particle-in-cellequations with full dynamics, or Vlasov or fluid equations with only parallel dynamics. With the use of the gyrokinetic quasineutrality equation and logical sheathboundary conditions, spatial and temporal resolution requirements are no longer set by the electron Debye length and plasma frequency, respectively. Finally, this test problem also helps illustratemore » some of the physics contained in the Hamiltonian form of the gyrokineticequations and some of the numerical challenges in developing an edge gyrokinetic code.« less

  18. A gyrokinetic one-dimensional scrape-off layer model of an edge-localized mode heat pulse

    SciTech Connect

    Shi, E. L.; Hakim, A. H.; Hammett, G. W.

    2015-02-03

    An electrostatic gyrokinetic-based model is applied to simulate parallel plasma transport in the scrape-off layer to a divertor plate. We focus on a test problem that has been studied previously, using parameters chosen to model a heat pulse driven by an edge-localized mode in JET. Previous work has used direct particle-in-cellequations with full dynamics, or Vlasov or fluid equations with only parallel dynamics. With the use of the gyrokinetic quasineutrality equation and logical sheathboundary conditions, spatial and temporal resolution requirements are no longer set by the electron Debye length and plasma frequency, respectively. Finally, this test problem also helps illustrate some of the physics contained in the Hamiltonian form of the gyrokineticequations and some of the numerical challenges in developing an edge gyrokinetic code.

  19. MERLIN Performance Simulation of Global CH4

    NASA Astrophysics Data System (ADS)

    Ehret, G.; Flamant, P.; Kiemle, C.; Quatrevalet, M.; Amediek, A.

    2011-12-01

    optically thin layers which also impact on the measurement performance are derived from CALIOP measurements for selected scenes. Global error maps for all four seasons are generated in order to demonstrate the CH4 flux error reduction potential by use of hypothetical MERLIN observations in observation simulation system experiments (OSSEs).

  20. Chasing Hamiltonian structure in gyrokinetic theory

    SciTech Connect

    Burby, J. W.

    2015-09-01

    Hamiltonian structure is pursued and uncovered in collisional and collisionless gyrokinetic theory. A new Hamiltonian formulation of collisionless electromagnetic theory is presented that is ideally suited to implementation on modern supercomputers. The method used to uncover this structure is described in detail and applied to a number of examples, where several well-known plasma models are endowed with a Hamiltonian structure for the first time. The first energy- and momentum-conserving formulation of full-F collisional gyrokinetics is presented. In an effort to understand the theoretical underpinnings of this result at a deeper level, a stochastic Hamiltonian modeling approach is presented and applied to pitch angle scattering. Interestingly, the collision operator produced by the Hamiltonian approach is equal to the Lorentz operator plus higher-order terms, but does not exactly conserve energy. Conversely, the classical Lorentz collision operator is provably not Hamiltonian in the stochastic sense.

  1. Towards nonhydrostatic simulation of moist global flows

    NASA Astrophysics Data System (ADS)

    Kurowski, Marcin J.; Grabowski, Wojciech W.; Smolarkiewicz, Piotr K.

    2015-04-01

    High-resolution simulation of moist global flows for numerical weather prediction and climate research requires convection-permitting nonhydrostatic flow solvers valid across the entire range of spatial scales, from small-scale dynamics to planetary-scale flows. Fluid flow solvers based on compressible dynamics meet such a requirement, but they need special treatments of acoustic modes to make them computationally efficient. Soundproof (e.g., anelastic) solvers filter out acoustic modes, but their application to the large-scale dynamics has been questioned in the past. In addition, mesoscale and large-scale hydrostatic pressure perturbations are typically excluded from moist thermodynamics in standard anelastic models. This presentation will review these issues and report application of the explicit/implicit compressible and anelastic versions of the finite-difference non-oscillatory forward-in-time EULAG model to the idealized baroclinic instability problem and to the Held-Suarez climate benchmark. All model versions share a common numerical framework and allow confident assessment of the impacts of governing equations mathematical formulations on model solutions. The implicit compressible version allows time steps as large as the anelastic version, typically two orders of magnitude larger than required by the explicit compressible version. We will show an excellent agreement between solutions obtained with the explicit and implicit compressible versions. Systematic differences between compressible and anelastic solutions are present in the baroclinic test case. In contrast, the climate benchmark shows that the compressible and anelastic model versions simulate similar zonally averaged fields, and that the meridional transports of entropy, momentum and moisture agree well between the two model versions.

  2. Free energy balance in gyrokinetic turbulence

    SciTech Connect

    Banon Navarro, A.; Morel, P.; Albrecht-Marc, M.; Carati, D.; Merz, F.; Goerler, T.; Jenko, F.

    2011-09-15

    Free energy plays an important role in gyrokinetic theory, since it is known to be a nonlinear invariant. Its evolution equations are derived and analyzed for the case of ion temperature gradient driven turbulence, using the formalism adopted in the Gene code. In particular, the ion temperature gradient drive, the collisional dissipation as well as entropy/electrostatic energy transfer channels represented by linear curvature and parallel terms are analyzed in detail.

  3. Generalized Covariant Gyrokinetic Dynamics of Magnetoplasmas

    SciTech Connect

    Cremaschini, C.; Tessarotto, M.; Nicolini, P.; Beklemishev, A.

    2008-12-31

    A basic prerequisite for the investigation of relativistic astrophysical magnetoplasmas, occurring typically in the vicinity of massive stellar objects (black holes, neutron stars, active galactic nuclei, etc.), is the accurate description of single-particle covariant dynamics, based on gyrokinetic theory (Beklemishev et al., 1999-2005). Provided radiation-reaction effects are negligible, this is usually based on the assumption that both the space-time metric and the EM fields (in particular the magnetic field) are suitably prescribed and are considered independent of single-particle dynamics, while allowing for the possible presence of gravitational/EM perturbations driven by plasma collective interactions which may naturally arise in such systems. The purpose of this work is the formulation of a generalized gyrokinetic theory based on the synchronous variational principle recently pointed out (Tessarotto et al., 2007) which permits to satisfy exactly the physical realizability condition for the four-velocity. The theory here developed includes the treatment of nonlinear perturbations (gravitational and/or EM) characterized locally, i.e., in the rest frame of a test particle, by short wavelength and high frequency. Basic feature of the approach is to ensure the validity of the theory both for large and vanishing parallel electric field. It is shown that the correct treatment of EM perturbations occurring in the presence of an intense background magnetic field generally implies the appearance of appropriate four-velocity corrections, which are essential for the description of single-particle gyrokinetic dynamics.

  4. Gyrokinetic Statistical Absolute Equilibrium and Turbulence

    SciTech Connect

    Jian-Zhou Zhu and Gregory W. Hammett

    2011-01-10

    A paradigm based on the absolute equilibrium of Galerkin-truncated inviscid systems to aid in understanding turbulence [T.-D. Lee, "On some statistical properties of hydrodynamical and magnetohydrodynamical fields," Q. Appl. Math. 10, 69 (1952)] is taken to study gyrokinetic plasma turbulence: A finite set of Fourier modes of the collisionless gyrokinetic equations are kept and the statistical equilibria are calculated; possible implications for plasma turbulence in various situations are discussed. For the case of two spatial and one velocity dimension, in the calculation with discretization also of velocity v with N grid points (where N + 1 quantities are conserved, corresponding to an energy invariant and N entropy-related invariants), the negative temperature states, corresponding to the condensation of the generalized energy into the lowest modes, are found. This indicates a generic feature of inverse energy cascade. Comparisons are made with some classical results, such as those of Charney-Hasegawa-Mima in the cold-ion limit. There is a universal shape for statistical equilibrium of gyrokinetics in three spatial and two velocity dimensions with just one conserved quantity. Possible physical relevance to turbulence, such as ITG zonal flows, and to a critical balance hypothesis are also discussed.

  5. Gyrokinetic modeling: A multi-water-bag approach

    SciTech Connect

    Morel, P.; Gravier, E.; Besse, N.; Klein, R.; Ghizzo, A.; Bertrand, P.; Garbet, X.; Ghendrih, P.; Grandgirard, V.; Sarazin, Y.

    2007-11-15

    Predicting turbulent transport in nearly collisionless fusion plasmas requires one to solve kinetic (or, more precisely, gyrokinetic) equations. In spite of considerable progress, several pending issues remain; although more accurate, the kinetic calculation of turbulent transport is much more demanding in computer resources than fluid simulations. An alternative approach is based on a water-bag representation of the distribution function that is not an approximation but rather a special class of initial conditions, allowing one to reduce the full kinetic Vlasov equation into a set of hydrodynamic equations while keeping its kinetic character. The main result for the water-bag model is a lower cost in the parallel velocity direction since no differential operator associated with some approximate numerical scheme has to be carried out on this variable v{sub parallel}. Indeed, a small bag number is sufficient to correctly describe the ion temperature gradient instability.

  6. Gyrokinetic turbulence under near-separatrix or nonaxisymmetric conditionsa)

    NASA Astrophysics Data System (ADS)

    Jenko, F.; Told, D.; Xanthopoulos, P.; Merz, F.; Horton, L. D.

    2009-05-01

    Linear and nonlinear gyrokinetic simulations with the GENE code [F. Jenko et al., Phys. Plasmas 7, 1904 (2000)] for tokamak edge plasmas as well as for stellarator core plasmas are presented, shedding light on the behavior of plasma microturbulence under near-separatrix or nonaxisymmetric conditions. To this aim, the required geometric coefficients are inferred directly from the magnetohydrodynamic equilibria of three different devices via the newly developed GIST code. It is found that the residual electron heat transport level in the H-mode edge can be explained in terms of high-wave-number fluctuations driven by electron temperature gradient modes. Moreover, the study of adiabatic ion temperature gradient turbulence in optimized stellarators points to the possibility of a systematic geometric optimization with respect to anomalous transport in nonaxisymmetric devices.

  7. Status of Continuum Edge Gyrokinetic Code Physics Development

    SciTech Connect

    Xu, X Q; Xiong, Z; Dorr, M R; Hittinger, J A; Kerbel, G D; Nevins, W M; Cohen, B I; Cohen, R H

    2005-05-31

    We are developing an edge gyro-kinetic continuum simulation code to study the boundary plasma over a region extending from inside the H-mode pedestal across the separatrix to the divertor plates. A 4-D ({psi}, {theta}, {epsilon}, {mu}) version of this code is presently being implemented, en route to a full 5-D version. A set of gyrokinetic equations[1] are discretized on computational grid which incorporates X-point divertor geometry. The present implementation is a Method of Lines approach where the phase-space derivatives are discretized with finite differences and implicit backwards differencing formulas are used to advance the system in time. A fourth order upwinding algorithm is used for particle cross-field drifts, parallel streaming, and acceleration. Boundary conditions at conducting material surfaces are implemented on the plasma side of the sheath. The Poisson-like equation is solved using GMRES with multi-grid preconditioner from HYPRE. A nonlinear Fokker-Planck collision operator from STELLA[2] in ({nu}{sub {parallel}},{nu}{sub {perpendicular}}) has been streamlined and integrated into the gyro-kinetic package using the same implicit Newton-Krylov solver and interpolating F and dF/dt|{sub coll} to/from ({epsilon}, {mu}) space. With our 4D code we compute the ion thermal flux, ion parallel velocity, self-consistent electric field, and geo-acoustic oscillations, which we compare with standard neoclassical theory for core plasma parameters; and we study the transition from collisional to collisionless end-loss. In the real X-point geometry, we find that the particles are trapped near outside midplane and in the X-point regions due to the magnetic configurations. The sizes of banana orbits are comparable to the pedestal width and/or the SOL width for energetic trapped particles. The effect of the real X-point geometry and edge plasma conditions on standard neoclassical theory will be evaluated, including a comparison of our 4D code with other kinetic

  8. Hybrid Gyrofluid/Gyrokinetic Modeling of Tokamak Turbulence with GryfX

    NASA Astrophysics Data System (ADS)

    Mandell, Noah; Dorland, Bill; Highcock, Edmund; Hammett, Greg

    2016-10-01

    Gyrofluid models are more efficient than gyrokinetic models, but have a disadvantage in their potential lack of physics fidelity. Here we present three major improvements to the physics fidelity and speed of gyrofluid models, which we encapsulate in the GryfX gyrofluid turbulence code. First, we implement a new nonlinear closure to model the cascade of free energy simultaneously in k⊥ and v⊥ via nonlinear phase-mixing (NLPM). Second, we use a hybrid algorithm that improves zonal flow physics by simulating zonal flow modes with a fully gyrokinetic model. These two improvements bring heat flux predictions from nonlinear GryfX simulations into agreement with the gyrokinetic code GS2. Third, we implement the equations on modern heterogeneous computing platforms, both as a standalone simulation tool that exploits the power of GPUs and as a component of TRINITY (a transport modeling code for tokamaks). GryfX has a roughly 1,200 times performance advantage over GS2 due to the combination of GPU acceleration and the reduction of hundreds of velocity space grid points to six gyrofluid moments. This makes GryfX ideal for large parameter scans, and enables the use of the TRINITY-GryfX system for efficient multi-scale analysis of tokamak turbulence on transport time scales. Present address: Chalmers University, Gothenburg, Sweden.

  9. A flux-matched gyrokinetic analysis of DIII-D L-mode turbulence

    SciTech Connect

    Görler, T. Told, D.; White, A. E.; Jenko, F.; Holland, C.; Rhodes, T. L.

    2014-12-15

    Previous nonlinear gyrokinetic simulations of specific DIII-D L-mode cases have been found to significantly underpredict the ion heat transport and associated density and temperature fluctuation levels by up to almost one of order of magnitude in the outer-core domain, i.e., roughly in the last third of the minor radius. Since then, this so-called shortfall issue has been subject to various speculations on possible reasons and furthermore motivation for a number of dedicated comparisons for L-mode plasmas in comparable machines. However, only a rather limited number of simulations and gyrokinetic codes has been applied to the original scenario, thus calling for further dedicated investigations in order to broaden the scientific basis. The present work contributes along these lines by employing another well-established gyrokinetic code in a numerically and physically comprehensive manner. Contrary to the previous studies, only a mild underprediction is observed at the outer radial positions which can furthermore be overcome by varying the ion temperature gradient within the error bars associated with the experimental measurement. The significance and reliability of these simulations are demonstrated by benchmarks, numerical convergence tests, and furthermore by extensive validation studies. The latter involve cross-phase and cross-power spectra analyses of various fluctuating quantities and confirm a high degree of realism. The code discrepancies come as a surprise since the involved software packages had been benchmarked repeatedly and very successfully in the past. Further collaborative effort in identifying the underlying difference is hence required.

  10. A flux-matched gyrokinetic analysis of DIII-D L-mode turbulence

    NASA Astrophysics Data System (ADS)

    Görler, T.; White, A. E.; Told, D.; Jenko, F.; Holland, C.; Rhodes, T. L.

    2014-12-01

    Previous nonlinear gyrokinetic simulations of specific DIII-D L-mode cases have been found to significantly underpredict the ion heat transport and associated density and temperature fluctuation levels by up to almost one of order of magnitude in the outer-core domain, i.e., roughly in the last third of the minor radius. Since then, this so-called shortfall issue has been subject to various speculations on possible reasons and furthermore motivation for a number of dedicated comparisons for L-mode plasmas in comparable machines. However, only a rather limited number of simulations and gyrokinetic codes has been applied to the original scenario, thus calling for further dedicated investigations in order to broaden the scientific basis. The present work contributes along these lines by employing another well-established gyrokinetic code in a numerically and physically comprehensive manner. Contrary to the previous studies, only a mild underprediction is observed at the outer radial positions which can furthermore be overcome by varying the ion temperature gradient within the error bars associated with the experimental measurement. The significance and reliability of these simulations are demonstrated by benchmarks, numerical convergence tests, and furthermore by extensive validation studies. The latter involve cross-phase and cross-power spectra analyses of various fluctuating quantities and confirm a high degree of realism. The code discrepancies come as a surprise since the involved software packages had been benchmarked repeatedly and very successfully in the past. Further collaborative effort in identifying the underlying difference is hence required.

  11. A very general electromagnetic gyrokinetic formalism

    NASA Astrophysics Data System (ADS)

    McMillan, B. F.; Sharma, A.

    2016-09-01

    We derive a gyrokinetic formalism which is very generally valid: the ordering allows both large inhomogeneities in plasma flow and magnetic field at long wavelength, such as typical drift-kinetic theories, as well as fluctuations at the gyro-scale. The underlying approach is to order the vorticity to be small, and to assert that the timescales in the local plasma frame are long compared to the gyrofrequency. Unlike most other derivations, we do not treat the long and short wavelength components of the fluctuating fields separately; the single-field description defines the particle motion and their interaction with the electromagnetic field at small-scale, the system-scale, and intermediate length scales in a unified fashion. As in earlier literature, the work consists of identifying a coordinate system where the gyroangle-dependent terms are small, and using a near-unity transform to systematically find a set of coordinates where the gyroangle dependence vanishes. We derive a gyrokinetic Lagrangian which is valid where the vorticity | ∇ × ( E × B / B ) | is small compared to the gyrofrequency Ω, and the magnetic field scale length is long compared to the gyroradius; we also require that time variation be slow in an appropriately chosen reference frame. This appears to be a minimum set of constraints on a gyrokinetic theory and is substantially more general than earlier approaches. It is the general-geometry electromagnetic extension of Dimits, Phys. Plasmas 17, 055901 (2010) (which is an electrostatic formalism with a homogeneous background magnetic field). This approach also does not require a separate treatment of fluctuating and background components of the magnetic field, unlike much of the previous literature. As a consequence, the "cross terms" due to a combination of long- and short-wavelength variation, which were ignored in the earlier work (but derived in a more restrictive ordering in Parra and Calvo, Plasma Phys. Controlled Fusion 53, 045001 (2011

  12. Linear gyrokinetic theory for kinetic magnetohydrodynamic eigenmodes in tokamak plasmas

    NASA Astrophysics Data System (ADS)

    Qin, H.; Tang, W. M.; Rewoldt, G.

    1999-06-01

    A two-dimensional (2D) numerical solution method is developed for the recently derived linear gyrokinetic system which describes arbitrary wavelength electromagnetic perturbations in tokamak plasmas. The system consists of the gyrokinetic equation, the gyrokinetic Poisson equation, and the gyrokinetic moment equation. Since familiar magnetohydrodynamic (MHD) results can be recovered entirely from this gyrokinetic model, and all interesting kinetic effects are intrinsically included, this gyrokinetic system offers an approach for kinetic MHD phenomena which is more rigorous, self-consistent, and comprehensive than the previous hybrid models. Meanwhile, drift type microinstabilities can be also investigated systematically in this theoretical framework. The linear gyrokinetic equation is solved for the distribution function in terms of the perturbed fields by integrating along unperturbed particle orbits. The solution is substituted back into the gyrokinetic moment equation and the gyrokinetic Poisson equation. When the boundary conditions are incorporated, an eigenvalue problem is formed. The resulting numerical code, KIN-2DEM, is applied to kinetic ballooning modes, internal kink modes, and toroidal Alfvén eigenmodes (TAEs). The numerical results are benchmarked against the well-established FULL code [G. Rewoldt, W. M. Tang, and M. S. Chance, Phys. Fluids 25, 480 (1982)], the PEST code [J. Manickam, Nucl. Fusion 24, 595 (1984)], and the NOVA-K code [C. Z. Cheng, Phys. Rep. 211, No. 1 (1992)]. More importantly, kinetic effects on MHD modes can be investigated nonperturbatively. In particular, the kinetic effects of the background plasma on internal kink modes and the hot particle destabilization of TAEs are studied numerically.

  13. Gyrokinetic Study of L-H Transition with Profile Evolution

    NASA Astrophysics Data System (ADS)

    Xie, Hua-Sheng; GTC Team

    2015-11-01

    Recent simulations based on gyrokinetic toroidal code (GTC) and theory based on model eigen equation (H. S. Xie and Y. Xiao, arXiv:1503.04440) have found that the eigenstates of mirco-instabilities (trapped electron mode TEM or ion temperature gradient mode ITG) under strong and weak gradients are not the same. Under weak gradient, the most unstable mode is on the ground state, with conventional ballooning mode structure. When the gradient exceed a critical value, the most unstable mode jump to non-ground state. The mode structures of non-ground state are rich and unconventional, and thus can reduced the transport level, which can provide a explanation to the H-mode in the mirco-scale aspect. Nonlinear simulations (H. S. Xie, Y. Xiao and Z. Lin, 9th West Lake International Symposium on Plasma Simulation, May. 18-21, 2015, Hangzhou, China) verified this and have also found a turning point of the gradient. The turbulent transport coefficient would decrease with the gradient increasing when the gradient exceed a critical value. This provide a new route for the L to H transition without invoking shear flow or zonal flow. In the above works, the profiles are fixed. In this work, we will give some preliminary results on self-consistent simulations of L-H transition including the evolution of the radial plasma profiles. Collaboration with GTC team.

  14. Global Responses to Potential Climate Change: A Simulation.

    ERIC Educational Resources Information Center

    Williams, Mary Louise; Mowry, George

    This interdisciplinary five-day unit provides students with an understanding of the issues in the debate on global climate change. Introductory lessons enhance understanding of the "greenhouse gases" and their sources with possible global effects of climate change. Students then roleplay negotiators from 10 nations in a simulation of the…

  15. A gyrokinetic perspective on the JET-ILW pedestal

    NASA Astrophysics Data System (ADS)

    Hatch, D. R.; Kotschenreuther, M.; Mahajan, S.; Valanju, P.; Liu, X.

    2017-03-01

    JET has been unable to recover historical confinement levels when operating with an ITER-like wall (ILW) due largely to the inaccessibility of high pedestal temperatures. Finding a path to overcome this challenge is of utmost importance for both a prospective JET DT campaign and for future ITER operation. Gyrokinetic simulations (using the Gene code) quantitatively capture experimental transport levels for a representative experimental discharge and qualitatively recover the major experimental trends. Microtearing turbulence is a major transport mechanisms for the low-temperature pedestals characteristic of unseeded JET-ILW discharges. At higher temperatures and/or lower {ρ\\ast} , we identify electrostatic ITG transport of a type that is strongly shear-suppressed on smaller machines. Consistent with observations, this transport mechanism is strongly reduced by the presence of a low-Z impurity (e.g. carbon or nitrogen at the level of {{Z}\\text{eff}}∼ 2 ), recovering the accessibility of high pedestal temperatures. Notably, simulations based on dimensionless {ρ\\ast} scans recover historical scaling behavior except in the unique JET-ILW parameter regime where ITG turbulence becomes important. Our simulations also elucidate the observed degradation of confinement caused by gas puffing, emphasizing the important role of the density pedestal structure. This study maps out important regions of parameter space, providing insights that may point to optimal physical regimes that can enable the recovery of high pedestal temperatures on JET.

  16. The next-generation ESL continuum gyrokinetic edge code

    NASA Astrophysics Data System (ADS)

    Cohen, R.; Dorr, M.; Hittinger, J.; Rognlien, T.; Collela, P.; Martin, D.

    2009-05-01

    The Edge Simulation Laboratory (ESL) project is developing continuum-based approaches to kinetic simulation of edge plasmas. A new code is being developed, based on a conservative formulation and fourth-order discretization of full-f gyrokinetic equations in parallel-velocity, magnetic-moment coordinates. The code exploits mapped multiblock grids to deal with the geometric complexities of the edge region, and utilizes a new flux limiter [P. Colella and M.D. Sekora, JCP 227, 7069 (2008)] to suppress unphysical oscillations about discontinuities while maintaining high-order accuracy elsewhere. The code is just becoming operational; we will report initial tests for neoclassical orbit calculations in closed-flux surface and limiter (closed plus open flux surfaces) geometry. It is anticipated that the algorithmic refinements in the new code will address the slow numerical instability that was observed in some long simulations with the existing TEMPEST code. We will also discuss the status and plans for physics enhancements to the new code.

  17. Intervention: Simulating the War on Global Terrorism

    ERIC Educational Resources Information Center

    Steinbrink, John E.; Helmer, Joel W.

    2004-01-01

    Students analyze a contemporary geopolitical event from a comprehensive geographic perspective using role play simulation, discussion, and decision-making. The three-day activity provides teachers with a realistic, ready-made classroom lesson that combines powerful conceptual learning with drama and surprise. The task of the teacher is to…

  18. Exact momentum conservation laws for the gyrokinetic Vlasov-Poisson equations

    SciTech Connect

    Brizard, Alain J.; Tronko, Natalia

    2011-08-15

    The exact momentum conservation laws for the nonlinear gyrokinetic Vlasov-Poisson equations are derived by applying the Noether method on the gyrokinetic variational principle [A. J. Brizard, Phys. Plasmas 7, 4816 (2000)]. From the gyrokinetic Noether canonical-momentum equation derived by the Noether method, the gyrokinetic parallel momentum equation and other gyrokinetic Vlasov-moment equations are obtained. In addition, an exact gyrokinetic toroidal angular-momentum conservation law is derived in axisymmetric tokamak geometry, where the transport of parallel-toroidal momentum is related to the radial gyrocenter polarization, which includes contributions from the guiding-center and gyrocenter transformations.

  19. Cooperative global security programs modeling & simulation.

    SciTech Connect

    Briand, Daniel

    2010-05-01

    The national laboratories global security programs implement sustainable technical solutions for cooperative nonproliferation, arms control, and physical security systems worldwide. To help in the development and execution of these programs, a wide range of analytical tools are used to model, for example, synthetic tactical environments for assessing infrastructure protection initiatives and tactics, systematic approaches for prioritizing nuclear and biological threat reduction opportunities worldwide, and nuclear fuel cycle enrichment and spent fuel management for nuclear power countries. This presentation will describe how these models are used in analyses to support the Obama Administration's agenda and bilateral/multinational treaties, and ultimately, to reduce weapons of mass destruction and terrorism threats through international technical cooperation.

  20. Teaching Global Awareness with Simulations and Games. Grades 6-12. Global Awareness Series.

    ERIC Educational Resources Information Center

    Lamy, Steven L.; And Others

    This teaching guide contains 15 simulation/games for students in grades 6-12 on the topic of global awareness. The overall objective is to help students understand various global concepts and social studies content. Specifically, it gives students the chance to experience and understand international/intercultural situations which involve people…

  1. Developing Experimentally Relevant Benchmarks for Gyrokinetic Microstability Codes

    NASA Astrophysics Data System (ADS)

    Bravenec, R.; Candy, J.; Dorland, W.; Ernst, D.; Staebler, G.; Waltz, R.

    2008-11-01

    A few nonlinear gyrokinetic microstability codes are now capable of simulating tokamak plasmas to an unprecedented level of complexity. Verification of these ``experimentally relevant'' simulations is difficult, however, because no benchmarks exist with which the codes can compare. This work describes the development of such benchmarks through ``apples-to-apples'' comparisons among codes, i.e., comparisons for the same plasma containing the same physics and having sufficient temporal, spatial, pitch-angle, and energy resolutions. A single utility code is used to extract experimental data from analysis by TRANSP, ONETWO, etc., and to produce input files for all the codes. The codes are first run linearly and, if differences in the mode frequencies are found, the computations are simplified by removing shaping, collisions, etc., one at a time, until agreement is reached. This process pinpoints the source(s) of the disagreement which the code developers attempt to resolve. Next, nonlinear runs are undertaken for the same cases and the procedure is repeated. The final results are both linear and nonlinear benchmarks at various levels of complexity by which other codes may be verified.

  2. Electromagnetic gyrokinetic turbulence in finite-beta helical plasmas

    SciTech Connect

    Ishizawa, A.; Watanabe, T.-H.; Sugama, H.; Nakajima, N.; Maeyama, S.

    2014-05-15

    A saturation mechanism for microturbulence in a regime of weak zonal flow generation is investigated by means of electromagnetic gyrokinetic simulations. The study identifies a new saturation process of the kinetic ballooning mode (KBM) turbulence originating from the spatial structure of the KBM instabilities in a finite-beta Large Helical Device (LHD) plasma. Specifically, the most unstable KBM in LHD has an inclined mode structure with respect to the mid-plane of a torus, i.e., it has a finite radial wave-number in flux tube coordinates, in contrast to KBMs in tokamaks as well as ion-temperature gradient modes in tokamaks and helical systems. The simulations reveal that the growth of KBMs in LHD is saturated by nonlinear interactions of oppositely inclined convection cells through mutual shearing as well as by the zonal flow. The saturation mechanism is quantitatively investigated by analysis of the nonlinear entropy transfer that shows not only the mutual shearing but also a self-interaction with an elongated mode structure along the magnetic field line.

  3. Meshless thin-shell simulation based on global conformal parameterization.

    PubMed

    Guo, Xiaohu; Li, Xin; Bao, Yunfan; Gu, Xianfeng; Qin, Hong

    2006-01-01

    This paper presents a new approach to the physically-based thin-shell simulation of point-sampled geometry via explicit, global conformal point-surface parameterization and meshless dynamics. The point-based global parameterization is founded upon the rigorous mathematics of Riemann surface theory and Hodge theory. The parameterization is globally conformal everywhere except for a minimum number of zero points. Within our parameterization framework, any well-sampled point surface is functionally equivalent to a manifold, enabling popular and powerful surface-based modeling and physically-based simulation tools to be readily adapted for point geometry processing and animation. In addition, we propose a meshless surface computational paradigm in which the partial differential equations (for dynamic physical simulation) can be applied and solved directly over point samples via Moving Least Squares (MLS) shape functions defined on the global parametric domain without explicit connectivity information. The global conformal parameterization provides a common domain to facilitate accurate meshless simulation and efficient discontinuity modeling for complex branching cracks. Through our experiments on thin-shell elastic deformation and fracture simulation, we demonstrate that our integrative method is very natural, and that it has great potential to further broaden the application scope of point-sampled geometry in graphics and relevant fields.

  4. Enabling Global Kinetic Simulations of the Magnetosphere via Petascale Computing

    NASA Astrophysics Data System (ADS)

    Karimabadi, H.; Vu, H. X.; Omelchenko, Y. A.; Tatineni, M.; Majumdar, A.; Catalyurek, U. V.; Saule, E.

    2009-11-01

    The ultimate goal in magnetospheric physics is to understand how the solar wind transfers its mass, momentum and energy to the magnetosphere. This problem has turned out to be much more complex intellectually than originally thought. MHD simulations have proven useful in predicting eminent features of substorms and other global events. Given the complexity of solar wind-magnetosphere interactions, hybrid (electron fluid, kinetic ion) simulations have recently been emerging in the studies of the global dynamics of the magnetosphere with the goal of accurately predicting the energetic particle transport and structure of plasma boundaries. We take advantage of our recent innovations in hybrid simulations and the power of massively parallel computers to make breakthrough 3D global kinetic simulations of the magnetosphere. The preliminary results reveal many major differences with global MHD simulations. For example, the hybrid simulations predict the formation of the quadruple structure associated with reconnection events, ion/ion kink instability in the tail, turbulence in the magnetosheath, and formation of the ion foreshock region.

  5. Gyrokinetic Studies of Turbulence in Steep Gradient Region: Role of Turbulence Spreading and E x B Shear

    SciTech Connect

    T.S. Hahm; Z. Lin; P.H. Diamond; G. Rewoldt; W.X. Wang; S. Ethier; O. Gurcan; W.W. Lee; W.M. Tang

    2004-12-21

    An integrated program of gyrokinetic particle simulation and theory has been developed to investigate several outstanding issues in both turbulence and neoclassical physics. Gyrokinetic particle simulations of toroidal ion temperature gradient (ITG) turbulence spreading using the GTC code and its related dynamical model have been extended to the case with radially increasing ion temperature gradient, to study the inward spreading of edge turbulence toward the core. Due to turbulence spreading from the edge, the turbulence intensity in the core region is significantly enhanced over the value obtained from simulations of the core region only. Even when the core gradient is within the Dimits shift regime (i.e., self-generated zonal flows reduce the transport to a negligible value), a significant level of turbulence and transport is observed in the core due to spreading from the edge. The scaling of the turbulent front propagation speed is closer to the prediction from our nonlinear diffusion model than one based on linear toroidal coupling. A calculation of ion poloidal rotation in the presence of sharp density and toroidal angular rotation frequency gradients from the GTC-Neo particle simulation code shows that the results are significantly different from the conventional neoclassical theory predictions. An energy conserving set of a fully electromagnetic nonlinear gyrokinetic Vlasov equation and Maxwell's equations, which is applicable to edge turbulence, is being derived via the phase-space action variational Lie perturbation method. Our generalized ordering takes the ion poloidal gyroradius to be on the order of the radial electric field gradient length.

  6. Gyrokinetic Turbulence Driven Toroidal Momentum Transport and Comparison to Experimental Observations

    NASA Astrophysics Data System (ADS)

    Wang, Weixing

    2008-11-01

    Global gyrokinetic simulations using the GTS code [1] have found that a large inward flux of toroidal momentum is driven robustly in the post saturation phase of ion temperature gradient (ITG) turbulence. As a consequence, core plasma rotation spins up resulting in δu a few percent of vth in the case with no momentum source at the edge. The underlying physics for the inward flux is identified to be the generation of residual stress due to the k symmetry breaking [2] induced by self-generated zonal flow shear which is quasi-stationary in global simulations. The elatively low level momentum flux in the long- time steady state appears to be approximately diffusive, with effective χφ/χi on the order of unity, in broad agreement with experimental observations and theory predictions for ITG turbulence [3]. Neoclassical simulations using the GTC- NEO code [4] also show that the ion temperature gradient can drive a significant inward nondiffusive momentum flux. However, the overall neoclassical contribution to the momentum transport is negligibly small compared to experimental levels for NSTX and DIII-D plasmas. It is also found that finite residual turbulence can survive strong mean ExB shear flow induced damping. This residual turbulence in the presence of strong ExB shear may drive an insignificant ion heat flux reasonably close to the neoclassical value, and a finite momentum flux significantly higher than the neoclassical level. Moreover, the equilibrium ExB flow shear is found to reduce the turbulence driven transport for energy more efficiently than for momentum. These findings may offer an explanation for rather peculiar observations of near neoclassical ion heat and anomalous momentum transport in experiments, which has been often observed in various machines, but with little theoretical understanding. [1] W.X. Wang et al., Phys. Plasmas 14, 072306 (2007). [2] O.D. Gurcan et al., Phys. Plasmas 14, 042306 (2007). [3] N. Mattor and P.H. Diamond, Phys. Fluids 31

  7. Benchmark Studies of the Gyro-Landau-Fluid code and Gyro-kinetic Codes on Kinetic Ballooning Modes

    NASA Astrophysics Data System (ADS)

    Tang, Tengfei; Xu, Xueqiao; Ma, Chenhao; Holland, Chris; Candy, Jeff

    2015-11-01

    A Gyro-Landau-Fluid (GLF) 3 +1 model has been implemented in BOUT + + framework recently, which contains full Finite-Larmor-Radius (FLR) effects, Landau damping and toroidal resonance. A linear global beta scan has been done using the cbm18 series equilibriums, showing that the unstable modes are kinetic ballooning modes (KBMs). In this work, we use the GYRO code, which is a gyrokinetic continuum code widely used for simulation of the plasma microturbulence, to benchmark with GLF 3 +1 code on KBMs. As the modes locate in peak pressure gradient region, a linear local beta scan using the same set of equilibriums has been done at this position for comparison. With the drift kinetic electron module in the GYRO code by including small electron-ion collision to damp electron modes, GYRO generated mode structures and parity suggest that they are kinetic ballooning modes, and the growth rate is comparable to the GLF results. However, a radial scan of the pedestal for a particular cbm18 equilibrium shows that the growth rate of the most unstable mode shifts outward to the bottom of pedestal and the real frequency of what was originally the KBMs steadily approaches and crosses over to the electron diamagnetic drift direction. Prepared by LLNL under Contract DE-AC52-07NA27344.

  8. The Hamiltonian Structure and Euler-Poincare Formulation of the Valsov-Maxwell and Gyrokinetic System

    SciTech Connect

    J. Squire, H. Qin and W.M. Tang

    2012-09-25

    We present a new variational principle for the gyrokinetic system, similar to the Maxwell-Vlasov action presented in Ref. 1. The variational principle is in the Eulerian frame and based on constrained variations of the phase space fluid velocity and particle distribution function. Using a Legendre transform, we explicitly derive the field theoretic Hamiltonian structure of the system. This is carried out with the Dirac theory of constraints, which is used to construct meaningful brackets from those obtained directly from Euler-Poincare theory. Possible applications of these formulations include continuum geometric integration techniques, large-eddy simulation models and Casimir type stability methods. __________________________________________________

  9. GBS: Global 3D simulation of tokamak edge region

    NASA Astrophysics Data System (ADS)

    Zhu, Ben; Fisher, Dustin; Rogers, Barrett; Ricci, Paolo

    2012-10-01

    A 3D two-fluid global code, namely Global Braginskii Solver (GBS), is being developed to explore the physics of turbulent transport, confinement, self-consistent profile formation, pedestal scaling and related phenomena in the edge region of tokamaks. Aimed at solving drift-reduced Braginskii equations [1] in complex magnetic geometry, the GBS is used for turbulence simulation in SOL region. In the recent upgrade, the simulation domain is expanded into close flux region with twist-shift boundary conditions. Hence, the new GBS code is able to explore global transport physics in an annular full-torus domain from the top of the pedestal into the far SOL. We are in the process of identifying and analyzing the linear and nonlinear instabilities in the system using the new GBS code. Preliminary results will be presented and compared with other codes if possible.[4pt] [1] A. Zeiler, J. F. Drake and B. Rogers, Phys. Plasmas 4, 2134 (1997)

  10. Asymptotic and spectral analysis of the gyrokinetic-waterbag integro-differential operator in toroidal geometry

    NASA Astrophysics Data System (ADS)

    Besse, Nicolas; Coulette, David

    2016-08-01

    Achieving plasmas with good stability and confinement properties is a key research goal for magnetic fusion devices. The underlying equations are the Vlasov-Poisson and Vlasov-Maxwell (VPM) equations in three space variables, three velocity variables, and one time variable. Even in those somewhat academic cases where global equilibrium solutions are known, studying their stability requires the analysis of the spectral properties of the linearized operator, a daunting task. We have identified a model, for which not only equilibrium solutions can be constructed, but many of their stability properties are amenable to rigorous analysis. It uses a class of solution to the VPM equations (or to their gyrokinetic approximations) known as waterbag solutions which, in particular, are piecewise constant in phase-space. It also uses, not only the gyrokinetic approximation of fast cyclotronic motion around magnetic field lines, but also an asymptotic approximation regarding the magnetic-field-induced anisotropy: the spatial variation along the field lines is taken much slower than across them. Together, these assumptions result in a drastic reduction in the dimensionality of the linearized problem, which becomes a set of two nested one-dimensional problems: an integral equation in the poloidal variable, followed by a one-dimensional complex Schrödinger equation in the radial variable. We show here that the operator associated to the poloidal variable is meromorphic in the eigenparameter, the pulsation frequency. We also prove that, for all but a countable set of real pulsation frequencies, the operator is compact and thus behaves mostly as a finite-dimensional one. The numerical algorithms based on such ideas have been implemented in a companion paper [D. Coulette and N. Besse, "Numerical resolution of the global eigenvalue problem for gyrokinetic-waterbag model in toroidal geometry" (submitted)] and were found to be surprisingly close to those for the original gyrokinetic

  11. Testing empirical relationships between global sea-level and global temperature in long climate model simulations

    NASA Astrophysics Data System (ADS)

    von Storch, H.; Zorita, E.; Gonzalez-Rouco, F.

    2009-04-01

    Estimations of future global sea-level rise brought about by increasing concentrations of atmospheric greenhouse gases of anthropogenic origin are based on simulations with coarse-resolution global climate models, which imposes some limitations on the skill of future projections because some of the processes that modulate the heat and fresh water flux into may not be adequately represented. To fill this gap, and until more complex climate models are available, some ad-hoc methods have been proposed that link the rise in global average temperature with the global mean sea-level rise. The statistical methods can be calibrated with observations and applied to the future global temperature rise simulated by climate models. This methods can be tested in the virtual reality simulated by global atmosphere.ocean models. Thereby, deficiencies can be identified and improvement suggested. The output of 1000-year long climate model simulation with the coupled atmosphere-ocean model ECHO-G over the past millennium has been used to determine the skill of different predictors to describe the variations of the rate of sea-level change in the simulation. These predictor variables comprise the global mean near-surface temperature, its rate of change with time and the heat-flux into the ocean. It is found that, in the framework of this climate simulation, global mean temperature is not a good predictor for the rate-of-change of sea-level. The correlation between both variables is not stable along the simulations and even its sign changes. A better predictor is the rate-of-change of temperature. Its correlation with the rate-of-change of sea-level is much more stable, it is always positive along the simulation, and there exists a lead-lag relationship between both that can be understood in simple physical terms. The best predictor among those tested is the heat-flux into the ocean. Its correlation is higher and there exists no time lag to the rate-of-change of sea-level, as expected

  12. Verification of Gyrokinetic codes: theoretical background and applications

    NASA Astrophysics Data System (ADS)

    Tronko, Natalia

    2016-10-01

    In fusion plasmas the strong magnetic field allows the fast gyro motion to be systematically removed from the description of the dynamics, resulting in a considerable model simplification and gain of computational time. Nowadays, the gyrokinetic (GK) codes play a major role in the understanding of the development and the saturation of turbulence and in the prediction of the consequent transport. We present a new and generic theoretical framework and specific numerical applications to test the validity and the domain of applicability of existing GK codes. For a sound verification process, the underlying theoretical GK model and the numerical scheme must be considered at the same time, which makes this approach pioneering. At the analytical level, the main novelty consists in using advanced mathematical tools such as variational formulation of dynamics for systematization of basic GK code's equations to access the limits of their applicability. The indirect verification of numerical scheme is proposed via the Benchmark process. In this work, specific examples of code verification are presented for two GK codes: the multi-species electromagnetic ORB5 (PIC), and the radially global version of GENE (Eulerian). The proposed methodology can be applied to any existing GK code. We establish a hierarchy of reduced GK Vlasov-Maxwell equations using the generic variational formulation. Then, we derive and include the models implemented in ORB5 and GENE inside this hierarchy. At the computational level, detailed verification of global electromagnetic test cases based on the CYCLONE are considered, including a parametric β-scan covering the transition between the ITG to KBM and the spectral properties at the nominal β value.

  13. Fluid and gyrokinetic modelling of particle transport in plasmas with hollow density profiles

    NASA Astrophysics Data System (ADS)

    Tegnered, D.; Oberparleiter, M.; Nordman, H.; Strand, P.

    2016-11-01

    Hollow density profiles occur in connection with pellet fuelling and L to H transitions. A positive density gradient could potentially stabilize the turbulence or change the relation between convective and diffusive fluxes, thereby reducing the turbulent transport of particles towards the center, making the fuelling scheme inefficient. In the present work, the particle transport driven by ITG/TE mode turbulence in regions of hollow density profiles is studied by fluid as well as gyrokinetic simulations. The fluid model used, an extended version of the Weiland transport model, Extended Drift Wave Model (EDWM), incorporates an arbitrary number of ion species in a multi-fluid description, and an extended wavelength spectrum. The fluid model, which is fast and hence suitable for use in predictive simulations, is compared to gyrokinetic simulations using the code GENE. Typical tokamak parameters are used based on the Cyclone Base Case. Parameter scans in key plasma parameters like plasma β, R/LT , and magnetic shear are investigated. It is found that β in particular has a stabilizing effect in the negative R/Ln region, both nonlinear GENE and EDWM show a decrease in inward flux for negative R/Ln and a change of direction from inward to outward for positive R/Ln . This might have serious consequences for pellet fuelling of high β plasmas.

  14. Simulation of the global contrail radiative forcing: A sensitivity analysis

    NASA Astrophysics Data System (ADS)

    Yi, Bingqi; Yang, Ping; Liou, Kuo-Nan; Minnis, Patrick; Penner, Joyce E.

    2012-12-01

    The contrail radiative forcing induced by human aviation activity is one of the most uncertain contributions to climate forcing. An accurate estimation of global contrail radiative forcing is imperative, and the modeling approach is an effective and prominent method to investigate the sensitivity of contrail forcing to various potential factors. We use a simple offline model framework that is particularly useful for sensitivity studies. The most-up-to-date Community Atmospheric Model version 5 (CAM5) is employed to simulate the atmosphere and cloud conditions during the year 2006. With updated natural cirrus and additional contrail optical property parameterizations, the RRTMG Model (RRTM-GCM application) is used to simulate the global contrail radiative forcing. Global contrail coverage and optical depth derived from the literature for the year 2002 is used. The 2006 global annual averaged contrail net (shortwave + longwave) radiative forcing is estimated to be 11.3 mW m-2. Regional contrail radiative forcing over dense air traffic areas can be more than ten times stronger than the global average. A series of sensitivity tests are implemented and show that contrail particle effective size, contrail layer height, the model cloud overlap assumption, and contrail optical properties are among the most important factors. The difference between the contrail forcing under all and clear skies is also shown.

  15. Effects of collisions on conservation laws in gyrokinetic field theory

    NASA Astrophysics Data System (ADS)

    Sugama, H.; Watanabe, T.-H.; Nunami, M.

    2014-10-01

    In gyrokinetic field theory, the gyrokinetic Vlasov equation, Poisson's equation, and Ampere's law are all obtained from the Lagrangian formulation, and conservation laws of energy and momentum for collisionless magnetized plasmas are derived by applying the Noether's theorem. In this work, effects of collisions on conservation laws are investigated by using the gyrokinetic Boltzmann equation which includes Landau's collision operator represented in the gyrocenter coordinates. Particle, energy, and momentum transport equations including collisional transport fluxes are systematically derived by modifying Noether's theorem. Then, the ensemble-averaged transport equations of particles, energy, and toroidal momentum given in the present work are shown to include both collisional and turbulent transport fluxes which agree with those derived from the conventional recursive formulation with the WKB representation.

  16. Simulation of Aerosols and Chemistry with a Unified Global Model

    NASA Technical Reports Server (NTRS)

    Chin, Mian

    2004-01-01

    This project is to continue the development of the global simulation capabilities of tropospheric and stratospheric chemistry and aerosols in a unified global model. This is a part of our overall investigation of aerosol-chemistry-climate interaction. In the past year, we have enabled the tropospheric chemistry simulations based on the GEOS-CHEM model, and added stratospheric chemical reactions into the GEOS-CHEM such that a globally unified troposphere-stratosphere chemistry and transport can be simulated consistently without any simplifications. The tropospheric chemical mechanism in the GEOS-CHEM includes 80 species and 150 reactions. 24 tracers are transported, including O3, NOx, total nitrogen (NOy), H2O2, CO, and several types of hydrocarbon. The chemical solver used in the GEOS-CHEM model is a highly accurate sparse-matrix vectorized Gear solver (SMVGEAR). The stratospheric chemical mechanism includes an additional approximately 100 reactions and photolysis processes. Because of the large number of total chemical reactions and photolysis processes and very different photochemical regimes involved in the unified simulation, the model demands significant computer resources that are currently not practical. Therefore, several improvements will be taken, such as massive parallelization, code optimization, or selecting a faster solver. We have also continued aerosol simulation (including sulfate, dust, black carbon, organic carbon, and sea-salt) in the global model to cover most of year 2002. These results have been made available to many groups worldwide and accessible from the website http://code916.gsfc.nasa.gov/People/Chin/aot.html.

  17. Global simulations of plasma turbulence in laboratory plasmas

    NASA Astrophysics Data System (ADS)

    Ricci, P.; Fasoli, A.; Furno, I.; Jolliet, S.; Loizu, J.; Mosetto, A.; Rogers, B. N.; Theiler, C.

    2012-04-01

    The Global Braginskii Solver (GBS) code has been developed in the last few years to simulate plasma turbulence in laboratory plasmas [1]. By solving the drift-reduced Braginkii equation in magnetic configurations of increasing complexity, from linear devices to the Simple Magnetized Toroidal (SMT) configuration, GBS performs non-linear self-consistent global three-dimensional simulations of the plasma dynamics, as the result of the interplay among the plasma source, the turbulent transport, and the plasma losses at the vessel. This gradual approach has allowed gaining a deep understanding of the turbulence dynamics, by identifying the instabilities responsible for driving plasma turbulence and to estimate the turbulence saturation amplitude. In particular, simulation results have pointed out the need of global simulations to correctly represent the dynamics of laboratory plasmas, as well as the importance of not separating fluctuations and equilibrium quantities. A code validation development project has been conducted side by side with the GBS development [2]. Such validation project has lead to the establishment of a rigorous methodology to carry out experiment-simulation comparison, and has allowed quantifying precisely the level of agreement between the GBS results and the experimental data from the TORPEX experiment at CRPP. [1] P. Ricci, B.N. Rogers, S. Brunner, Phys. Rev. Lett. 100, 225002 (2008); P. Ricci and B. N. Rogers, Phys. Rev. Lett. 104, 145001 (2010); B. N. Rogers and P. Ricci, Phys. Rev. Lett. 104, 225002 (2010); B. Li et al., Phys. Rev. E 83, 056406 (2011). [2] P. Ricci et al, Phys. Plasmas 16, 055703 (2009); P. Ricci et al., Phys. Plasmas 18, 032109 (2011).

  18. Global MHD Simulation of Mesoscale Structures at the Magnetospheric Boundary

    NASA Technical Reports Server (NTRS)

    Berchem, Jean

    1998-01-01

    The research carried out for this protocol was focused on the study of mesoscales structures at the magnetospheric boundary. We investigated three areas: (1) the structure of the magnetospheric boundary for steady solar wind conditions; (2) the dynamics of the dayside magnetospheric boundary and (3) the dynamics of the distant tail magnetospheric boundary. Our approach was to use high resolution three-dimensional global magnetohydrodynamic (MHD) simulations of the interaction of the solar wind with the Earth's magnetosphere. We first considered simple variations of the interplanetary conditions to obtain generic cases that helped us in establishing the basic cause and effect relationships for steady solar wind conditions. Subsequently, we used actual solar wind plasma and magnetic field parameters measured by an upstream spacecraft as input to the simulations and compared the simulation results with sequences of events observed by another or several other spacecraft located downstream the bow shock. In particular we compared results with observations made when spacecraft crossed the magnetospheric boundary.

  19. The effect of global visual flow on simulator sickness

    NASA Technical Reports Server (NTRS)

    Sharkey, Thomas J.; Mccauley, Michael E.

    1991-01-01

    Simulator-induced sickness is investigated in experiments performed at the NASA Ames Army Crew Station Research Facility using the fixed-base helmet-mounted-display flight simulator described by Lypaczewski et al. (1986). The focus of the tests was on the possible roles of (1) global visual flow, as defined by Warren et al. (1982), and (2) maneuvering intensity (in the conflict hypothesis of Reason and Brand, 1975). The results, based on subjective evaluations, physiological measurements, and physical tests on 19 Army helicopter pilots performing a 40-min river-valley following task, are presented in extensive tables and graphs and discussed. The data are found to be in agreement with (1) and inconsistent with (2), indicating more sickness at lower altitude instead of with increased maneuvering. Shorter simulator sessions and postponement of low-altitude work until later in the training period are recommended.

  20. Gyrokinetic neoclassical study of the bootstrap current in the tokamak edge pedestal with fully non-linear Coulomb collisions

    DOE PAGES

    Hager, Robert; Chang, C. S.

    2016-04-08

    As a follow-up on the drift-kinetic study of the non-local bootstrap current in the steep edge pedestal of tokamak plasma by Koh et al. [Phys. Plasmas 19, 072505 (2012)], a gyrokinetic neoclassical study is performed with gyrokinetic ions and drift-kinetic electrons. Besides the gyrokinetic improvement of ion physics from the drift-kinetic treatment, a fully non-linear Fokker-Planck collision operator—that conserves mass, momentum, and energy—is used instead of Koh et al.'s linearized collision operator in consideration of the possibility that the ion distribution function is non-Maxwellian in the steep pedestal. An inaccuracy in Koh et al.'s result is found in the steepmore » edge pedestal that originated from a small error in the collisional momentum conservation. The present study concludes that (1) the bootstrap current in the steep edge pedestal is generally smaller than what has been predicted from the small banana-width (local) approximation [e.g., Sauter et al., Phys. Plasmas 6, 2834 (1999) and Belli et al., Plasma Phys. Controlled Fusion 50, 095010 (2008)], (2) the plasma flow evaluated from the local approximation can significantly deviate from the non-local results, and (3) the bootstrap current in the edge pedestal, where the passing particle region is small, can be dominantly carried by the trapped particles in a broad trapped boundary layer. In conclusion, a new analytic formula based on numerous gyrokinetic simulations using various magnetic equilibria and plasma profiles with self-consistent Grad-Shafranov solutions is constructed.« less

  1. Gyrokinetic neoclassical study of the bootstrap current in the tokamak edge pedestal with fully non-linear Coulomb collisions

    NASA Astrophysics Data System (ADS)

    Hager, Robert; Chang, C. S.

    2016-04-01

    As a follow-up on the drift-kinetic study of the non-local bootstrap current in the steep edge pedestal of tokamak plasma by Koh et al. [Phys. Plasmas 19, 072505 (2012)], a gyrokinetic neoclassical study is performed with gyrokinetic ions and drift-kinetic electrons. Besides the gyrokinetic improvement of ion physics from the drift-kinetic treatment, a fully non-linear Fokker-Planck collision operator—that conserves mass, momentum, and energy—is used instead of Koh et al.'s linearized collision operator in consideration of the possibility that the ion distribution function is non-Maxwellian in the steep pedestal. An inaccuracy in Koh et al.'s result is found in the steep edge pedestal that originated from a small error in the collisional momentum conservation. The present study concludes that (1) the bootstrap current in the steep edge pedestal is generally smaller than what has been predicted from the small banana-width (local) approximation [e.g., Sauter et al., Phys. Plasmas 6, 2834 (1999) and Belli et al., Plasma Phys. Controlled Fusion 50, 095010 (2008)], (2) the plasma flow evaluated from the local approximation can significantly deviate from the non-local results, and (3) the bootstrap current in the edge pedestal, where the passing particle region is small, can be dominantly carried by the trapped particles in a broad trapped boundary layer. A new analytic formula based on numerous gyrokinetic simulations using various magnetic equilibria and plasma profiles with self-consistent Grad-Shafranov solutions is constructed.

  2. Gyrokinetic neoclassical study of the bootstrap current in the tokamak edge pedestal with fully non-linear Coulomb collisions

    SciTech Connect

    Hager, Robert; Chang, C. S.

    2016-04-08

    As a follow-up on the drift-kinetic study of the non-local bootstrap current in the steep edge pedestal of tokamak plasma by Koh et al. [Phys. Plasmas 19, 072505 (2012)], a gyrokinetic neoclassical study is performed with gyrokinetic ions and drift-kinetic electrons. Besides the gyrokinetic improvement of ion physics from the drift-kinetic treatment, a fully non-linear Fokker-Planck collision operator—that conserves mass, momentum, and energy—is used instead of Koh et al.'s linearized collision operator in consideration of the possibility that the ion distribution function is non-Maxwellian in the steep pedestal. An inaccuracy in Koh et al.'s result is found in the steep edge pedestal that originated from a small error in the collisional momentum conservation. The present study concludes that (1) the bootstrap current in the steep edge pedestal is generally smaller than what has been predicted from the small banana-width (local) approximation [e.g., Sauter et al., Phys. Plasmas 6, 2834 (1999) and Belli et al., Plasma Phys. Controlled Fusion 50, 095010 (2008)], (2) the plasma flow evaluated from the local approximation can significantly deviate from the non-local results, and (3) the bootstrap current in the edge pedestal, where the passing particle region is small, can be dominantly carried by the trapped particles in a broad trapped boundary layer. In conclusion, a new analytic formula based on numerous gyrokinetic simulations using various magnetic equilibria and plasma profiles with self-consistent Grad-Shafranov solutions is constructed.

  3. Impact of derived global weather data on simulated crop yields.

    PubMed

    van Wart, Justin; Grassini, Patricio; Cassman, Kenneth G

    2013-12-01

    Crop simulation models can be used to estimate impact of current and future climates on crop yields and food security, but require long-term historical daily weather data to obtain robust simulations. In many regions where crops are grown, daily weather data are not available. Alternatively, gridded weather databases (GWD) with complete terrestrial coverage are available, typically derived from: (i) global circulation computer models; (ii) interpolated weather station data; or (iii) remotely sensed surface data from satellites. The present study's objective is to evaluate capacity of GWDs to simulate crop yield potential (Yp) or water-limited yield potential (Yw), which can serve as benchmarks to assess impact of climate change scenarios on crop productivity and land use change. Three GWDs (CRU, NCEP/DOE, and NASA POWER data) were evaluated for their ability to simulate Yp and Yw of rice in China, USA maize, and wheat in Germany. Simulations of Yp and Yw based on recorded daily data from well-maintained weather stations were taken as the control weather data (CWD). Agreement between simulations of Yp or Yw based on CWD and those based on GWD was poor with the latter having strong bias and large root mean square errors (RMSEs) that were 26-72% of absolute mean yield across locations and years. In contrast, simulated Yp or Yw using observed daily weather data from stations in the NOAA database combined with solar radiation from the NASA-POWER database were in much better agreement with Yp and Yw simulated with CWD (i.e. little bias and an RMSE of 12-19% of the absolute mean). We conclude that results from studies that rely on GWD to simulate agricultural productivity in current and future climates are highly uncertain. An alternative approach would impose a climate scenario on location-specific observed daily weather databases combined with an appropriate upscaling method.

  4. Gyrokinetic Theory and Computational Methods for Electromagnetic Perturbations in Tokamaks

    NASA Astrophysics Data System (ADS)

    Qin, H.; Tang, W. M.; Rewoldt, G.

    1998-11-01

    A general gyrokinetic formalism and computational methods have been developed for electromagnetic perturbations in toroidal plasmas. This formalism and the associated numerical code represent the first self-consistent, comprehensive, fully kinetic model for treating both MHD instabilities and electromagnetic drift waves(H. Qin, W. M. Tang, and G. Rewoldt, Phys. Plasmas 5), 1035 (1998). The gyrokinetic system of equations is derived by phase-space Lagrangian Lie perturbation methods. An important component missing from previous gyrokinetic theories, the gyrokinetic perpendicular dynamics, is identified and developed. The corresponding numerical code, KIN-2DEM, has been systematically benchmarked against the high-n FULL code, the PEST code, and the NOVA-K code for kinetic ballooning modes, internal kink modes, and TAEs, respectively. For the internal kink mode, it is found that kinetic effects due to trapped ions can significantly modify the γ vs. q0 curve. For the destabilization of the TAEs by energetic particles, comparisons have been made between the non-perturbative, fully kinetic KIN-2DEM results and the perturbative hybrid NOVA-K results.

  5. Benchmark studies of the gyro-Landau-fluid code and gyro-kinetic codes on kinetic ballooning modes

    NASA Astrophysics Data System (ADS)

    Tang, T. F.; Xu, X. Q.; Ma, C. H.; Bass, E. M.; Holland, C.; Candy, J.

    2016-03-01

    A Gyro-Landau-Fluid (GLF) 3 + 1 model has been recently implemented in BOUT++ framework, which contains full Finite-Larmor-Radius effects, Landau damping, and toroidal resonance [Ma et al., Phys. Plasmas 22, 055903 (2015)]. A linear global beta scan has been conducted using the JET-like circular equilibria (cbm18 series), showing that the unstable modes are kinetic ballooning modes (KBMs). In this work, we use the GYRO code, which is a gyrokinetic continuum code widely used for simulation of the plasma microturbulence, to benchmark with GLF 3 + 1 code on KBMs. To verify our code on the KBM case, we first perform the beta scan based on "Cyclone base case parameter set." We find that the growth rate is almost the same for two codes, and the KBM mode is further destabilized as beta increases. For JET-like global circular equilibria, as the modes localize in peak pressure gradient region, a linear local beta scan using the same set of equilibria has been performed at this position for comparison. With the drift kinetic electron module in the GYRO code by including small electron-electron collision to damp electron modes, GYRO generated mode structures and parity suggest that they are kinetic ballooning modes, and the growth rate is comparable to the GLF results. However, a radial scan of the pedestal for a particular set of cbm18 equilibria, using GYRO code, shows different trends for the low-n and high-n modes. The low-n modes show that the linear growth rate peaks at peak pressure gradient position as GLF results. However, for high-n modes, the growth rate of the most unstable mode shifts outward to the bottom of pedestal and the real frequency of what was originally the KBMs in ion diamagnetic drift direction steadily approaches and crosses over to the electron diamagnetic drift direction.

  6. Grid-based Parallel Data Streaming Implemented for the Gyrokinetic Toroidal Code

    SciTech Connect

    S. Klasky; S. Ethier; Z. Lin; K. Martins; D. McCune; R. Samtaney

    2003-09-15

    We have developed a threaded parallel data streaming approach using Globus to transfer multi-terabyte simulation data from a remote supercomputer to the scientist's home analysis/visualization cluster, as the simulation executes, with negligible overhead. Data transfer experiments show that this concurrent data transfer approach is more favorable compared with writing to local disk and then transferring this data to be post-processed. The present approach is conducive to using the grid to pipeline the simulation with post-processing and visualization. We have applied this method to the Gyrokinetic Toroidal Code (GTC), a 3-dimensional particle-in-cell code used to study microturbulence in magnetic confinement fusion from first principles plasma theory.

  7. Non-steady Reconnection in Global Simulations of Magnetosphere Dynamics

    NASA Technical Reports Server (NTRS)

    Kuznetsova, M. M.; Hesse, M.; Sibeck, D.; Rastaetter, L.; Toth, G.; Ridley, A.

    2008-01-01

    To analyze the non-steady magnetic reconnection during quasi-steady solar wind driving we employed high resolution global MHD model BATSRUS with non-MHD corrections in diffusion regions around the reconnection sites. To clarify the role of small-scale non-MHD effects on the global magnetospheric dynamic we performed simulations with different models of dissipation. We found that magnetopause surface is not in steady state even during extended periods of steady solar wind conditions. The so-called tilted reconnection lines become unstable due to formation of pressure bubbles, strong core field flux tubes, vortices, and traveling magnetic field cavities. Non-steady dayside reconnection results in formation of flux tubes with bended axis magnetically connecting magnetic field cavities generated at flanks and strong core segments formed near the subsolar region. We found that the rate of magnetic flux loading to the tail lobes is not very sensitive to the dissipation mechanism and details of the dayside reconnection. On the other hand the magnetotail reconnection rate, the speed of the reconnection site retreat and the global magnetotail dynamics strongly depend on the model of dissipation. THEMIS and Cluster observations are consistent with signatures predicted by simulations.

  8. Numerical Instability in a 2D Gyrokinetic Code Caused by Divergent E × B Flow

    NASA Astrophysics Data System (ADS)

    Byers, J. A.; Dimits, A. M.; Matsuda, Y.; Langdon, A. B.

    1994-12-01

    In this paper, a numerical instability first observed in a 2D electrostatic gyrokinetic code is described. The instability should also be present in some form in many versons of particle-in-cell simulation codes that employ guiding center drifts. A perturbation analysis of the instability is given and its results agree quantitatively with the observations from the gyrokinetic code in all respects. The basic mechanism is a false divergence of the E × B flow caused by the interpolation between the grid and the particles as coupled with the specific numerical method for calculating E - ∇φ. Stability or instability depends in detail on the specific choice of particle interpolation method and field method. One common interpolation method, subtracted dipole, is stable. Other commonly used interpolation methods, linear and quadratic, are unstable when combined with a finite difference for the electric field. Linear and quadratic interpolation can be rendered stable if combined with another method for the electric field, the analytic differential of the interpolated potential.

  9. Profile stiffness measurements in the Helically Symmetric experiment and comparison to nonlinear gyrokinetic calculations

    SciTech Connect

    Weir, G. M.; Faber, B. J.; Likin, K. M.; Talmadge, J. N.; Anderson, D. T.; Anderson, F. S. B.

    2015-05-15

    Stiffness measurements are presented in the quasi-helically symmetric experiment (HSX), in which the neoclassical transport is comparable to that in a tokamak and turbulent transport dominates throughout the plasma. Electron cyclotron emission is used to measure the local electron temperature response to modulated electron cyclotron resonant heating. The amplitude and phase of the heat wave through the steep electron temperature gradient (ETG) region of the plasma are used to determine a transient electron thermal diffusivity that is close to the steady-state diffusivity. The low stiffness in the region between 0.2 ≤ r/a ≤ 0.4 agrees with the scaling of the steady-state heat flux with temperature gradient in this region. These experimental results are compared to gyrokinetic calculations in a flux-tube geometry using the gyrokinetic electromagnetic numerical experiment code with two kinetic species. Linear simulations show that the ETG mode may be experimentally relevant within r/a ≤ 0.2, while the Trapped Electron Mode (TEM) is the dominant long-wavelength microturbulence instability across most of the plasma. The TEM is primarily driven by the density gradient. Non-linear calculations of the saturated heat flux driven by the TEM and ETG bracket the experimental heat flux.

  10. Application of Global Paleovegetation Data for Benchmarking Paleoclimate Simulations

    NASA Astrophysics Data System (ADS)

    Izumi, K.; Bartlein, P. J.

    2011-12-01

    Climate models provide an opportunity for testing hypotheses concerning the causes of past climatic variations, providing the consistent explanations of past climate changes, and simulating potential future climate changes. We compare paleovegetation syntheses from the Last Glacial Maximum (LGM) and Mid Holocene (MH) with simulations performed as part of the Paleoclimate Modelling Intercomparison Project (PMIP) 2 and 3 projects, with the aim of evaluating the ability of the simulations to reproduce the key regional and global patterns of climate recorded by the data. We apply two approaches using vegetation models in a data-model comparison framework: a forward-modeling approach that simulates vegetation using climate-model output, and an inverse-modeling approach that uses the vegetation data to infer the past values of the specific climate that controlled vegetation distributions. In the forward-modeling approach, we use the BIOME 4 equilibrium-biogeochemistry model and palaeovegetation data (e.g. BIOME 6000), which includes new regional pollen data sets from Australia, Southeast Asia, South America, and the Indian subcontinent, in order to evaluate the response of PMIP2 AOGCMs simulations of the LGM and MH. For the inverse approach, we use BIOME4 to iteratively estimate the potential paleoclimate consistent with based on the BIOME6000 data using a Monte Carlo Markov Chain algorithm. BIOME 4 employs mechanistic descriptions of the relationship of vegetation on climate and also allows the direct effects of carbon dioxide concentration to be considered. In addition to standard (i.e. map-comparison) approaches for comparing the simulated/observed vegetation and climate, we show some diagnostics based the mapping of observed and simulated biomes in climatic spaces. These diagnoses can provide information about the specific climatological explanations for the mismatches between the simulations and observations.

  11. Effect of heterogeneousatmospheric CO2 on simulated global carbon budget

    USGS Publications Warehouse

    Zhang, Zhen; Jiang, Hong; Liu, Jinxun; Ju, Weimin; Zhang, Xiuying

    2013-01-01

    The effects of rising atmospheric carbon dioxide (CO2) on terrestrial carbon (C) sequestration have been a key focus in global change studies. As anthropological CO2 emissions substantially increase, the spatial variability of atmospheric CO2 should be considered to reduce the potential bias on C source and sink estimations. In this study, the global spatial–temporal patterns of near surface CO2 concentrations for the period 2003-2009 were established using the SCIAMACHY satellite observations and the GLOBALVIEW-CO2 field observations. With this CO2 data and the Integrated Biosphere Simulator (IBIS), our estimation of the global mean annual NPP and NEP was 0.5% and 7% respectively which differs from the traditional C sequestration assessments. The Amazon, Southeast Asia, and Tropical Africa showed higher C sequestration than the traditional assessment, and the rest of the areas around the world showed slightly lower C sequestration than the traditional assessment. We find that the variability of NEP is less intense under heterogeneous CO2 pattern on a global scale. Further studies of the cause of CO2 variation and the interactions between natural and anthropogenic processes of C sequestration are needed.

  12. Studies of climate dynamics with innovative global-model simulations

    NASA Astrophysics Data System (ADS)

    Shi, Xiaoming

    Climate simulations with different degrees of idealization are essential for the development of our understanding of the climate system. Studies in this dissertation employ carefully designed global-model simulations for the goal of gaining theoretical and conceptual insights into some problems of climate dynamics. Firstly, global warming-induced changes in extreme precipitation are investigated using a global climate model with idealized geography. The precipitation changes over an idealized north-south mid-latitude mountain barrier at the western margin of an otherwise flat continent are studied. The intensity of the 40 most intense events on the western slopes increases by about ~4°C of surface warming. In contrast, the intensity of the top 40 events on the eastern mountain slopes increases at about ~6°C. This higher sensitivity is due to enhanced ascent during the eastern-slope events, which can be explained in terms of linear mountain-wave theory relating to global warming-induced changes in the upper-tropospheric static stability and the tropopause level. Dominated by different dynamical factors, changes in the intensity of extreme precipitation events over plains and oceans might differ from changes over mountains. So the response of extreme precipitation over mountains and flat areas are further compared using larger data sets of simulated extreme events over the two types of surfaces. It is found that the sensitivity of extreme precipitation to increases in global mean surface temperature is 3% per °C lower over mountains than over the oceans or the plains. The difference in sensitivity among these regions is not due to thermodynamic effects, but rather to differences between the gravity-wave dynamics governing vertical velocities over the mountains and the cyclone dynamics governing vertical motions over the oceans and plains. The strengthening of latent heating in the storms over oceans and plains leads to stronger ascent in the warming climate

  13. Simulating the global transport of nitrogen oxides emissions from aircraft

    NASA Astrophysics Data System (ADS)

    Sausen, R.; Köhler, I.

    1994-05-01

    With the atmosphere general circulation model ECHAM the passive transport of NOx emitted from global subsonic air traffic and the NOx concentration change due to these emissions are investigated. The source of NOx is prescribed according to an aircraft emission data base. The sink of NOx is parameterized as an exponential decay process with globally constant lifetime. Simulations in perpetual January and July modes are performed. Both the resulting mean and the standard deviation of the NOx mass mixing ratio are analysed. In January horizontal dispersion is more pronounced and vertical mixing is smaller than in July. In both cases the resulting quasi-stationary fields of the mass mixing ratio display a pronounced zonal asymmetry. The variability accounts up to 30% of the mean field.

  14. Global simulation of the carbon isotope exchange of terrestrial ecosystems

    NASA Astrophysics Data System (ADS)

    Ito, A.; Terao, Y.; Mukai, H.

    2009-12-01

    There remain large uncertainties in our quantification of global carbon cycle, which has close interactions with the climate system and is subject to human-induced global environmental change. Information on carbon isotopes is expected to reduce the uncertainty by providing additional constraints on net atmosphere-ecosystem exchange. This study attempted to simulate the dynamics of carbon isotopes at the global scale, using a process-based terrestrial ecosystem model: Vegetation Integrative SImulator for Trace gases (VISIT). The base-model of carbon cycle (Sim-CYCLE, Ito 2003) has already considered stable carbon isotope composition (13C/12C), and here radioactive carbon isotope (14C) was included. The isotope ratios characterize various aspects of terrestrial carbon cycle, which is difficult to be constrained by sole mass balance. For example, isotopic discrimination by photosynthetic assimilation is closely related with leaf stomatal conductance and composition of C3 and C4 plant in grasslands. Isotopic disequilibrium represents mean residence time of terrestrial carbon pools. In this study, global simulations (spatial resolution 0.5-deg, time-step 1-month) were conducted during the period 1901 to 2100 on the basis of observed and projected atmospheric CO2, climate, and land-use conditions. As anthropogenic CO2 accumulates in the atmosphere, heavier stable carbon isotope (13C) was diluted, while radioactive carbon isotope (14C) is strongly affected by atomic bomb experiments mainly in the 1950s and 1960s. The model simulated the decadal change in carbon isotope compositions. Leaf carbon with shorter mean residence time responded rapidly to the atmospheric change, while plant stems and soil humus showed substantial time-lag, leading to large isotopic disequilibrium. In the future, the isotopic disequilibrium was estimated to augment, due to accelerated rate of anthropogenic CO2 accumulation. Spatial distribution of stable isotope composition (12C/13C, or d13C) was

  15. Can Multimedia Make Kids Care about Social Studies? The GlobalEd Problem-Based Learning Simulation

    ERIC Educational Resources Information Center

    Ioannou, Andri; Brown, Scott W.; Hannafin, Robert D.; Boyer, Mark A.

    2009-01-01

    This study investigated whether using multimedia-based instructional material in a problem-based social studies simulation enhances student learning about world issues, increases interest in social studies, and generates positive attitudes toward the instruction. The GlobalEd Project, a Web-based international negotiation simulation embedded in…

  16. Simulating the global ozone distribution with ICON-ART

    NASA Astrophysics Data System (ADS)

    Schröter, Jennifer; Ruhnke, Roland

    2015-04-01

    Ozone is one of the most important atmospheric trace gases within the stratosphere as well as in the troposphere. Atmospheric chemistry is driven by solar radiation induced photodissociation of atmospheric trace gases. Thus, the calculation of the actinic flux and hence of the photodissociation frequencies is an essential part in the simulation of atmospheric trace gas distributions. The ICON-ART1 model is an extension of the non-hydrostatic modeling framework ICON2, jointly developed by the German Weather Service (DWD) and Max-Planck-Institute for Meteorology (MPI-M), and is used for numerical weather prediction as well as for future climate predictions. ICON-ART is developed with the goal to simulate interactions between trace substances and the state of the atmosphere. For the dynamics (transport and diffusion) of gaseous tracers, the original ICON tracer framework is used. For the model physics, numerical time integration follows a process splitting approach separating physical processes. Each process is called independently via an interface module. Currently, the processes of emission, dry and wet deposition, sedimentation, and first order chemical reactions are included. In this study we introduce a new gas-phase chemistry module for ICON-ART in combination with an online photolysis module. The new gas-phase chemical module uses the kpp formalism3 and the photolysis module is based on Fast-JX4, which provides online calculation of actinic flux for a wavelength region down to 170 nm, depending on the actual state of ozone, temperature, pressure, relative humidity and liquid water path, resulting in photolysis rates which are usable for the simulation of tropospheric as well as stratospheric trace gas distributions. We will present first simulations of global ozone distribution by using the new gas-phase chemistry module and photolysis module within ICON-ART to show the ability of ICON-ART to investigate chemical mechanisms and transport of chemical trace gas

  17. Global contrail coverage simulated by CAM5 with the inventory of 2006 global aircraft emissions

    NASA Astrophysics Data System (ADS)

    Chen, Chih-Chieh; Gettelman, Andrew; Craig, Cheryl; Minnis, Patrick; Duda, David P.

    2012-02-01

    This paper documents the incorporation of an inventory of the AEDT (Aviation Environmental Design Tool) global commercial aircraft emissions for the year of 2006 into the National Center for Atmospheric Research Community Earth System Model (CESM) version 1. The original dataset reports aircraft emission mass of ten species on an hourly basis which is converted to monthly emission mixing ratio tendencies as the released version of the dataset. We also describe how the released aircraft emission dataset is incorporated into CESM. A contrail parameterization is implemented in the CESM in which it is assumed that persistent contrails initially form when aircraft water vapor emissions experience a favorable atmospheric environment. Both aircraft emissions and ambient humidity are attributed to the formation of contrails. The ice water content of contrails is assumed to follow an empirical function of atmospheric temperature which determines the cloud fraction associated with contrails. Our modeling study indicates that the simulated global contrail coverage is sensitive to the vertical resolution of the GCMs in the upper troposphere and lower stratosphere because of model assumptions about the vertical overlap structure of clouds. Furthermore, the extent of global contrail coverage simulated by CESM exhibits a seasonal cycle which is in broad agreement with observations.

  18. Global Dynamic Numerical Simulations of Plate Tectonic Reorganizations

    NASA Astrophysics Data System (ADS)

    Morra, G.; Quevedo, L.; Butterworth, N.; Matthews, K. J.; Müller, D.

    2010-12-01

    We use a new numerical approach for global geodynamics to investigate the origin of present global plate motion and to identify the causes of the last two global tectonic reorganizations occurred about 50 and 100 million years ago (Ma) [1]. While the 50 Ma event is the most well-known global plate-mantle event, expressed by the bend in the Hawaiian-Emperor volcanic chain, a prominent plate reorganization at about 100 Ma, although presently little studied, is clearly indicated by a major bend in the fracture zones in the Indian Ocean and by a change in Pacific plate motion [2]. Our workflow involves turning plate reconstructions into surface meshes that are subsequently employed as initial conditions for global Boundary Element numerical models. The tectonic setting that anticipates the reorganizations is processed with the software GPlates, combining the 3D mesh of the paleo-plate morphology and the reconstruction of paleo-subducted slabs, elaborated from tectonic history [3]. All our models involve the entire planetary system, are fully dynamic, have free surface, are characterized by a spectacular computational speed due to the simultaneous use of the multi-pole algorithm and the Boundary Element formulation and are limited only by the use of sharp material property variations [4]. We employ this new tool to unravel the causes of plate tectonic reorganizations, producing and comparing global plate motion with the reconstructed ones. References: [1] Torsvik, T., Müller, R.D., Van der Voo, R., Steinberger, B., and Gaina, C., 2008, Global Plate Motion Frames: Toward a unified model: Reviews in Geophysics, VOL. 46, RG3004, 44 PP., 2008 [2] Wessel, P. and Kroenke, L.W. Pacific absolute plate motion since 145 Ma: An assessment of the fixed hot spot hypothesis. Journal of Geophysical Research, Vol 113, B06101, 2008 [3] L. Quevedo, G. Morra, R. D. Mueller. Parallel Fast Multipole Boundary Element Method for Crustal Dynamics, Proceeding 9th World Congress and 4th Asian

  19. Search for gyrokinetic dependencies in helium transport at Alcator C-Mod

    NASA Astrophysics Data System (ADS)

    Liao, Kenneth; Rowan, William; Hatch, David; Bespamyatnov, Igor; Horton, Wendell

    2013-10-01

    Helium-3 and helium-4 impurity transport measurements and density profile measurements have been obtained on Alcator C-Mod in a variety of discharge conditions, using the core Charge Exchange Recombination Spectroscopy (CXRS) diagnostic. The helium concentrations range from trace (< 2 %) to large minority (~ 20 %). L-mode, H-mode, and I-mode results are included, with Ohmic heated, ICRF heated, and LH heated plasmas. Helium profiles are observed to vary with plasma current, and also change in time during ICRF shots. Linear and nonlinear gyrokinetic simulations are performed for some shots using the GENE code. Sensitivity scans are done for magnetic shear, impurity density, and other plasma parameters and transport scalings are compared with experimental results. Simulated transport flux is compared with experimentally derived D and v parameters. Supported by USDoE awards DE-FG03-96ER-54373 and DE-FC02-99ER54512.

  20. Gyrokinetic studies of trapped electron mode turbulence in the Helically Symmetric eXperiment stellarator

    SciTech Connect

    Faber, B. J.; Pueschel, M. J.; Terry, P. W.; Proll, J. H. E.; Hegna, C. C.; Weir, G. M.; Likin, K. M.; Talmadge, J. N.

    2015-07-15

    Gyrokinetic simulations of plasma microturbulence in the Helically Symmetric eXperiment are presented. Using plasma profiles relevant to experimental operation, four dominant drift wave regimes are observed in the ion wavenumber range, which are identified as different flavors of density-gradient-driven trapped electron modes. For the most part, the heat transport exhibits properties associated with turbulence driven by these types of modes. Additionally, long-wavelength, radially localized, nonlinearly excited coherent structures near the resonant central flux surface, not predicted by linear simulations, can further enhance flux levels. Integrated heat fluxes are compatible with experimental observations in the corresponding density gradient range. Despite low shearing rates, zonal flows are observed to regulate turbulence but can be overwhelmed at higher density gradients by the long-wavelength coherent structures.

  1. Very high-resolution simulations of depolarization fronts in global scale MHD simulations of the magnetosphere

    NASA Astrophysics Data System (ADS)

    Wiltberger, M. J.; Lyon, J.; Elkington, S. R.; Merkin, V. G.

    2013-12-01

    Global scale magnetohydrodynamic simulations have been used to successfully study the evolution of the magnetosphere-ionosphere system under a variety of solar wind conditions. Early studies with the Lyon-Fedder-Mobarry (LFM) model show the presence of flow channels in substorm simulations that had characteristics similar to those seen in observations of bursty bulk flows (BBFs) observed by numerous spacecraft, such as AMPTE and Geotail. More recently the THEMIS constellation has provided a unique opportunity to track the evolution of dipolarization fronts (DFs) from the mid-tail into the inner magnetosphere. Additionally, advances in high performance computing capability make it possible to conduct ultra-high resolution global simulations. In this paper we present comparisons between these ultra-high resolution simulations and the observations of THEMIS. The comparisons include a case study for a DF that was well observed on February 27, 2009 and statistical properties of the flow and electromagnetic field signatures seen in observations and MHD simulations with idealized solar wind conditions. In addition to these comparisons we will present results of using test-particle simulations of electrons driven by the simulated fields to study particle energization in regions around DFs.

  2. Physical Processes for Driving Ionospheric Outflows in Global Simulations

    NASA Technical Reports Server (NTRS)

    Moore, Thomas Earle; Strangeway, Robert J.

    2009-01-01

    We review and assess the importance of processes thought to drive ionospheric outflows, linking them as appropriate to the solar wind and interplanetary magnetic field, and to the spatial and temporal distribution of their magnetospheric internal responses. These begin with the diffuse effects of photoionization and thermal equilibrium of the ionospheric topside, enhancing Jeans' escape, with ambipolar diffusion and acceleration. Auroral outflows begin with dayside reconnexion and resultant field-aligned currents and driven convection. These produce plasmaspheric plumes, collisional heating and wave-particle interactions, centrifugal acceleration, and auroral acceleration by parallel electric fields, including enhanced ambipolar fields from electron heating by precipitating particles. Observations and simulations show that solar wind energy dissipation into the atmosphere is concentrated by the geomagnetic field into auroral regions with an amplification factor of 10-100, enhancing heavy species plasma and gas escape from gravity, and providing more current carrying capacity. Internal plasmas thus enable electromagnetic driving via coupling to the plasma, neutral gas and by extension, the entire body " We assess the Importance of each of these processes in terms of local escape flux production as well as global outflow, and suggest methods for their implementation within multispecies global simulation codes. We complete 'he survey with an assessment of outstanding obstacles to this objective.

  3. Magnetohydrodynamic simulations of global accretion disks with vertical magnetic fields

    SciTech Connect

    Suzuki, Takeru K.; Inutsuka, Shu-ichiro

    2014-04-01

    We report results of three-dimensional magnetohydrodynamical (MHD) simulations of global accretion disks threaded with weak vertical magnetic fields. We perform the simulations in the spherical coordinates with different temperature profiles and accordingly different rotation profiles. In the cases with a spatially constant temperature, because the rotation frequency is vertically constant in the equilibrium condition, general properties of the turbulence excited by magnetorotational instability are quantitatively similar to those obtained in local shearing box simulations. On the other hand, in the cases with a radially variable temperature profile, the vertical differential rotation, which is inevitable in the equilibrium condition, winds up the magnetic field lines in addition to the usual radial differential rotation. As a result, the coherent wound magnetic fields contribute to the Maxwell stress in the surface regions. We obtain nondimensional density and velocity fluctuations ∼0.1-0.2 at the midplane. The azimuthal power spectra of the magnetic fields show shallower slopes, ∼m {sup 0} – m {sup –1}, than those of velocity and density. The Poynting flux associated with the MHD turbulence drives intermittent and structured disk winds as well as sound-like waves toward the midplane. The mass accretion mainly occurs near the surfaces, and the gas near the midplane slowly moves outward in the time domain of the present simulations. The vertical magnetic fields are also dragged inward in the surface regions, while they stochastically move outward and inward around the midplane. We also discuss an observational implication of induced spiral structure in the simulated turbulent disks.

  4. Integrated particle simulation of neoclassical and turbulence physics in the tokamak pedestal/edge region using XGC

    SciTech Connect

    Chang, C S; Ku, Seung-Hoe; Adams, Mark; D'Azevedo, Eduardo; Chen, Yang; Cummings, Julian; Ethier, Stephane; Greengard, Leslie; Hahm, Taik Soo; Hinton, Fred; Keyes, David E; Klasky, Scott A; Lee, Wei-Li; Lin, Zhihong; Nishimura, Yasutaro; Parker, Scott; Samtaney, Ravi; Stotler, D.; Weitzner, Harold; Worley, Patrick H; Zorin, Denis

    2007-01-01

    An integrated gyrokinetic particle simulation with turbulence and neoclassical physics in a diverted tokamak edge plasma has been performed. Neoclassical equilibrium gyrokinetic solutions in the whole edge plasma have been separated from the turbulence activities for the first time, using the massively parallel Jaguar XT3 computer at Oak Ridge National Laboratory. The equilibrium solutions in an H-mode-like edge plasma condition show strongly sheared global ExB and parallel flows in the entire edge plasma including the pedestal and scrape-off regions. In an L-mode-like edge plasma condition, the sheared flows in the pedestal layer are much weaker, supporting the conjecture that the neoclassical flow-shear may play a significant role in the H-mode physics.

  5. Atmospheric Sulfur Cycle Simulated in The Global Model GOCART: Model Description and Global Properties

    NASA Technical Reports Server (NTRS)

    Chin, Mian; Rood, Richard B.; Lin, Shian-Jiann; Mueller, Jean-Francois; Thompson, Anne M.

    2000-01-01

    The Georgia Tech/Goddard Global Ozone Chemistry Aerosol Radiation and Transport (GOCART) model is used to simulate the atmospheric sulfur cycle. The model uses the simulated meteorological data from the Goddard Earth Observing System Data Assimilation System (GEOS DAS). Global sulfur budgets from a 6-year simulation for SO2, sulfate, dimethylsulfide (DMS), and methanesulfonic acid (MSA) are presented in this paper. In a normal year without major volcanic perturbations, about 20% of the sulfate precursor emission is from natural sources (biogenic and volcanic) and 80% is anthropogenic: the same sources contribute 339% and 67% respectively to the total sulfate burden. A sulfate production efficiency of 0.41 - 0.42 is estimated in the model, an efficiency which is defined as a ratio of the amount oi sulfate produced to the total amount of SO2 emitted and produced in the atmosphere. This value indicates that less than half of the SO2 entering the atmosphere contributes to the sulfate production, the rest being removed by dry and wet depositions. In a simulation for 1990, we estimate a total sulfate production of 39 Tg S /yr with 36% and 64% respectively from in-air and in-cloud oxidation of SO2. We also demonstrate that major volcanic eruptions, such as the Mt. Pinatubo eruption in 1991, can significantly change the sulfate formation pathways, distributions, abundance, and lifetime. Comparison with other models shows that the parameterizations for wet removal or wet production of sulfate are the most critical factors in determining the burdens of SO2 and sulfate. Therefore, a priority for future research should be to reduce the large uncertainties associated with the wet physical and chemical processes.

  6. Global Adjoint Tomography: Combining Big Data with HPC Simulations

    NASA Astrophysics Data System (ADS)

    Bozdag, E.; Lefebvre, M. P.; Lei, W.; Peter, D. B.; Smith, J. A.; Komatitsch, D.; Tromp, J.

    2014-12-01

    The steady increase in data quality and the number of global seismographic stations have substantially grown the amount of data available for construction of Earth models. Meanwhile, developments in the theory of wave propagation, numerical methods and HPC systems have enabled unprecedented simulations of seismic wave propagation in realistic 3D Earth models which lead the extraction of more information from data, ultimately culminating in the use of entire three-component seismograms.Our aim is to take adjoint tomography further to image the entire planet which is one of the extreme cases in seismology due to its intense computational requirements and vast amount of high-quality seismic data that can potentially be assimilated in inversions. We have started low resolution (T > 27 s, soon will be > 17 s) global inversions with 253 earthquakes for a transversely isotropic crust and mantle model on Oak Ridge National Laboratory's Cray XK7 "Titan" system. Recent improvements in our 3D solvers, such as the GPU version of the SPECFEM3D_GLOBE package, will allow us perform higher-resolution (T > 9 s) and longer-duration (~180 m) simulations to take the advantage of high-frequency body waves and major-arc surface waves to improve imbalanced ray coverage as a result of uneven distribution of sources and receivers on the globe. Our initial results after 10 iterations already indicate several prominent features reported in high-resolution continental studies, such as major slabs (Hellenic, Japan, Bismarck, Sandwich, etc.) and enhancement in plume structures (the Pacific superplume, the Hawaii hot spot, etc.). Our ultimate goal is to assimilate seismic data from more than 6,000 earthquakes within the magnitude range 5.5 ≤ Mw ≤ 7.0. To take full advantage of this data set on ORNL's computational resources, we need a solid framework for managing big data sets during pre-processing (e.g., data requests and quality checks), gradient calculations, and post-processing (e

  7. The energetic coupling of scales in gyrokinetic plasma turbulence

    NASA Astrophysics Data System (ADS)

    Teaca, Bogdan; Navarro, Alejandro Bañón; Jenko, Frank

    2014-07-01

    In magnetized plasma turbulence, the couplings of perpendicular spatial scales that arise due to the nonlinear interactions are analyzed from the perspective of the free-energy exchanges. The plasmas considered here, with appropriate ion or electron adiabatic electro-neutrality responses, are described by the gyrokinetic formalism in a toroidal magnetic geometry. Turbulence develops due to the electrostatic fluctuations driven by temperature gradient instabilities, either ion temperature gradient (ITG) or electron temperature gradient (ETG). The analysis consists in decomposing the system into a series of scale structures, while accounting separately for contributions made by modes possessing special symmetries (e.g., the zonal flow modes). The interaction of these scales is analyzed using the energy transfer functions, including a forward and backward decomposition, scale fluxes, and locality functions. The comparison between the ITG and ETG cases shows that ETG turbulence has a more pronounced classical turbulent behavior, exhibiting a stronger energy cascade, with implications for gyrokinetic turbulence modeling.

  8. Gyrokinetic investigation of ITG modes in helical RFPs

    NASA Astrophysics Data System (ADS)

    Predebon, I.; Xanthopoulos, P.; Terranova, D.

    2013-10-01

    Micro-instabilities in the RFP have been investigated in the last years from several viewpoints and with various numerical tools. The strongest underlying assumption for all of these approaches is that the magnetic equilibrium does not deviate significantly from axisymmetry. Contrary to this, in RFX-mod, the physical conditions more favorable for the onset of electrostatic/electromagnetic turbulence emerge when magnetic surfaces are helical, i.e., during the single helicity states of the RFP. In general, we wish to systematically revisit the existing gyrokinetic studies of microturbulence focusing on the novel 3D feature. The RFP equilibria are now derived using the VMEC code and subsequently applied to the nonlinear gyrokinetic code GENE with the aid of the GIST interface code. The physical problem we address here is the occurrence of ITG instability in single helicity plasmas, and its distinct properties compared to the axisymmetric geometry.

  9. A Numerical Instability in an ADI Algorithm for Gyrokinetics

    SciTech Connect

    E.A. Belli; G.W. Hammett

    2004-12-17

    We explore the implementation of an Alternating Direction Implicit (ADI) algorithm for a gyrokinetic plasma problem and its resulting numerical stability properties. This algorithm, which uses a standard ADI scheme to divide the field solve from the particle distribution function advance, has previously been found to work well for certain plasma kinetic problems involving one spatial and two velocity dimensions, including collisions and an electric field. However, for the gyrokinetic problem we find a severe stability restriction on the time step. Furthermore, we find that this numerical instability limitation also affects some other algorithms, such as a partially implicit Adams-Bashforth algorithm, where the parallel motion operator v{sub {parallel}} {partial_derivative}/{partial_derivative}z is treated implicitly and the field terms are treated with an Adams-Bashforth explicit scheme. Fully explicit algorithms applied to all terms can be better at long wavelengths than these ADI or partially implicit algorithms.

  10. The energetic coupling of scales in gyrokinetic plasma turbulence

    SciTech Connect

    Teaca, Bogdan; Jenko, Frank

    2014-07-15

    In magnetized plasma turbulence, the couplings of perpendicular spatial scales that arise due to the nonlinear interactions are analyzed from the perspective of the free-energy exchanges. The plasmas considered here, with appropriate ion or electron adiabatic electro-neutrality responses, are described by the gyrokinetic formalism in a toroidal magnetic geometry. Turbulence develops due to the electrostatic fluctuations driven by temperature gradient instabilities, either ion temperature gradient (ITG) or electron temperature gradient (ETG). The analysis consists in decomposing the system into a series of scale structures, while accounting separately for contributions made by modes possessing special symmetries (e.g., the zonal flow modes). The interaction of these scales is analyzed using the energy transfer functions, including a forward and backward decomposition, scale fluxes, and locality functions. The comparison between the ITG and ETG cases shows that ETG turbulence has a more pronounced classical turbulent behavior, exhibiting a stronger energy cascade, with implications for gyrokinetic turbulence modeling.

  11. Global economic burden of Chagas disease: a computational simulation model

    PubMed Central

    Lee, Bruce Y; Bacon, Kristina M; Bottazzi, Maria Elena; Hotez, Peter J

    2013-01-01

    Summary Background As Chagas disease continues to expand beyond tropical and subtropical zones, a growing need exists to better understand its resulting economic burden to help guide stakeholders such as policy makers, funders, and product developers. We developed a Markov simulation model to estimate the global and regional health and economic burden of Chagas disease from the societal perspective. Methods Our Markov model structure had a 1 year cycle length and consisted of five states: acute disease, indeterminate disease, cardiomyopathy with or without congestive heart failure, megaviscera, and death. Major model parameter inputs, including the annual probabilities of transitioning from one state to another, and present case estimates for Chagas disease came from various sources, including WHO and other epidemiological and disease-surveillance-based reports. We calculated annual and lifetime health-care costs and disability-adjusted life-years (DALYs) for individuals, countries, and regions. We used a discount rate of 3% to adjust all costs and DALYs to present-day values. Findings On average, an infected individual incurs US$474 in health-care costs and 0·51 DALYs annually. Over his or her lifetime, an infected individual accrues an average net present value of $3456 and 3·57 DALYs. Globally, the annual burden is $627·46 million in health-care costs and 806 170 DALYs. The global net present value of currently infected individuals is $24·73 billion in health-care costs and 29 385 250 DALYs. Conversion of this burden into costs results in annual per-person costs of $4660 and lifetime per-person costs of $27 684. Global costs are $7·19 billion per year and $188·80 billion per lifetime. More than 10% of these costs emanate from the USA and Canada, where Chagas disease has not been traditionally endemic. A substantial proportion of the burden emerges from lost productivity from cardiovascular disease-induced early mortality. Interpretation The economic burden

  12. Gyrokinetic treatment of a grazing angle magnetic presheath

    NASA Astrophysics Data System (ADS)

    Geraldini, A.; Parra, F. I.; Militello, F.

    2017-02-01

    We develop a gyrokinetic treatment for ions in the magnetic presheath, close to the plasma-wall boundary. We focus on magnetic presheaths with a small magnetic field to wall angle, α \\ll 1 (in radians). Characteristic lengths perpendicular to the wall in such a magnetic presheath scale with the typical ion Larmor orbit size, {ρ }{{i}}. The smallest scale length associated with variations parallel to the wall is taken to be across the magnetic field, and ordered l={ρ }{{i}}/δ , where δ \\ll 1 is assumed. The scale lengths along the magnetic field line are assumed so long that variations associated with this direction are neglected. These orderings are consistent with what we expect close to the divertor target of a tokamak. We allow for a strong component of the electric field {E} in the direction normal to the electron repelling wall, with strong variation in the same direction. The large change of the electric field over an ion Larmor radius distorts the orbit so that it is not circular. We solve for the lowest order orbits by identifying coordinates, which consist of constants of integration, an adiabatic invariant and a gyrophase, associated with periodic ion motion in the system with α =δ =0. By using these new coordinates as variables in the limit α ∼ δ \\ll 1, we obtain a generalised ion gyrokinetic equation. We find another quantity that is conserved to first order and use this to simplify the gyrokinetic equation, solving it in the case of a collisionless magnetic presheath. Assuming a Boltzmann response for the electrons, a form of the quasineutrality equation that exploits the change of variables is derived. The gyrokinetic and quasineutrality equations give the ion distribution function and electrostatic potential in the magnetic presheath if the entrance boundary condition is specified.

  13. A geometry interface for gyrokinetic microturbulence investigations in toroidal configurations

    NASA Astrophysics Data System (ADS)

    Xanthopoulos, P.; Cooper, W. A.; Jenko, F.; Turkin, Yu.; Runov, A.; Geiger, J.

    2009-08-01

    The GENE/GIST code package is developed for the investigation of plasma microturbulence, suitable for both stellarator and tokamak configurations. The geometry module is able to process typical equilibrium files and create the interface for the gyrokinetic solver. The analytical description of the method for constructing the geometric elements is documented, together with several numerical evaluation tests. As a concrete application of this product, a cross-machine comparison of the anomalous ion heat diffusivity is presented.

  14. Global Change Simulations Affect Potential Methane Oxidation in Upland Soils

    NASA Astrophysics Data System (ADS)

    Blankinship, J. C.; Hungate, B. A.

    2004-12-01

    Atmospheric concentrations of methane (CH4) are higher now than they have ever been during the past 420,000 years. However, concentrations have remained stable since 1999. Emissions associated with livestock husbandry are unlikely to have changed, so some combination of reduced production in wetlands, more efficient capture by landfills, or increased consumption by biological CH4 oxidation in upland soils may be responsible. Methane oxidizing bacteria are ubiquitous in upland soils and little is known about how these bacteria respond to anthropogenic global change, and how they will influence - or already are influencing - the radiative balance of the atmosphere. Might ongoing and future global changes increase biological CH4 oxidation? Soils were sampled from two field experiments to assess changes in rates of CH4 oxidation in response to global change simulations. Potential activities of CH4 oxidizing bacterial communities were measured through laboratory incubations under optimal temperature, soil moisture, and atmospheric CH4 concentrations (~18 ppm, or 10x ambient). The ongoing 6-year multifactorial Jasper Ridge Global Change Experiment (JRGCE) simulates warming, elevated precipitation, elevated atmospheric CO2, elevated atmospheric N deposition, and increased wildfire frequency in an annual grassland in a Mediterranean-type climate in central California. The ongoing 1-year multifactorial Merriam Climate Change Experiment (MCCE) simulates warming, elevated precipitation, and reduced precipitation in four different types of ecosystems along an elevational gradient in a semi-arid climate in northern Arizona. The high desert grassland, pinyon-juniper woodland, ponderosa pine forest, and mixed conifer forest ecosystems range in annual precipitation from 100 to 1000 mm yr-1, and from productivity being strongly water limited to strongly temperature limited. Among JRGCE soils, elevated atmospheric CO2 increased potential CH4 oxidation rates (p=0.052) and wildfire

  15. Effects of collisions on conservation laws in gyrokinetic field theory

    SciTech Connect

    Sugama, H.; Nunami, M.; Watanabe, T.-H.

    2015-08-15

    Effects of collisions on conservation laws for toroidal plasmas are investigated based on the gyrokinetic field theory. Associating the collisional system with a corresponding collisionless system at a given time such that the two systems have the same distribution functions and electromagnetic fields instantaneously, it is shown how the collisionless conservation laws derived from Noether's theorem are modified by the collision term. Effects of the external source term added into the gyrokinetic equation can be formulated similarly with the collisional effects. Particle, energy, and toroidal momentum balance equations including collisional and turbulent transport fluxes are systematically derived using a novel gyrokinetic collision operator, by which the collisional change rates of energy and canonical toroidal angular momentum per unit volume in the gyrocenter space can be given in the conservative forms. The ensemble-averaged transport equations of particles, energy, and toroidal momentum given in the present work are shown to include classical, neoclassical, and turbulent transport fluxes which agree with those derived from conventional recursive formulations.

  16. Verification of gyrokinetic microstability codes with an LHD configuration

    SciTech Connect

    Mikkelsen, D. R.; Nunami, M.; Sugama, H.; Tanaka, K.; Watanabe, T.-H.

    2014-11-15

    We extend previous benchmarks of the GS2 and GKV-X codes to verify their algorithms for solving the gyrokinetic Vlasov-Poisson equations for plasma microturbulence. Code benchmarks are the most complete way of verifying the correctness of implementations for the solution of mathematical models for complex physical processes such as those studied here. The linear stability calculations reported here are based on the plasma conditions of an ion-ITB plasma in the LHD configuration. The plasma parameters and the magnetic geometry differ from previous benchmarks involving these codes. We find excellent agreement between the independently written pre-processors that calculate the geometrical coefficients used in the gyrokinetic equations. Grid convergence tests are used to establish the resolution and domain size needed to obtain converged linear stability results. The agreement of the frequencies, growth rates, and eigenfunctions in the benchmarks reported here provides additional verification that the algorithms used by the GS2 and GKV-X codes are correctly finding the linear eigenvalues and eigenfunctions of the gyrokinetic Vlasov-Poisson equations.

  17. Effects of collisions on conservation laws in gyrokinetic field theory

    NASA Astrophysics Data System (ADS)

    Sugama, H.; Watanabe, T.-H.; Nunami, M.

    2015-08-01

    Effects of collisions on conservation laws for toroidal plasmas are investigated based on the gyrokinetic field theory. Associating the collisional system with a corresponding collisionless system at a given time such that the two systems have the same distribution functions and electromagnetic fields instantaneously, it is shown how the collisionless conservation laws derived from Noether's theorem are modified by the collision term. Effects of the external source term added into the gyrokinetic equation can be formulated similarly with the collisional effects. Particle, energy, and toroidal momentum balance equations including collisional and turbulent transport fluxes are systematically derived using a novel gyrokinetic collision operator, by which the collisional change rates of energy and canonical toroidal angular momentum per unit volume in the gyrocenter space can be given in the conservative forms. The ensemble-averaged transport equations of particles, energy, and toroidal momentum given in the present work are shown to include classical, neoclassical, and turbulent transport fluxes which agree with those derived from conventional recursive formulations.

  18. Verification of gyrokinetic microstability codes with an LHD configuration

    SciTech Connect

    Mikkelsen, D. R.; Nunami, M.; Watanabe, T. -H.; Sugama, H.; Tanaka, K.

    2014-11-01

    We extend previous benchmarks of the GS2 and GKV-X codes to verify their algorithms for solving the gyrokinetic Vlasov-Poisson equations for plasma microturbulence. Code benchmarks are the most complete way of verifying the correctness of implementations for the solution of mathematical models for complex physical processes such as those studied here. The linear stability calculations reported here are based on the plasma conditions of an ion-ITB plasma in the LHD configuration. The plasma parameters and the magnetic geometry differ from previous benchmarks involving these codes. We find excellent agreement between the independently written pre-processors that calculate the geometrical coefficients used in the gyrokinetic equations. Grid convergence tests are used to establish the resolution and domain size needed to obtain converged linear stability results. The agreement of the frequencies, growth rates and eigenfunctions in the benchmarks reported here provides additional verification that the algorithms used by the GS2 and GKV-X codes are correctly finding the linear eigenvalues and eigenfunctions of the gyrokinetic Vlasov-Poisson equations.

  19. On push-forward representations in the standard gyrokinetic model

    SciTech Connect

    Miyato, N. Yagi, M.; Scott, B. D.

    2015-01-15

    Two representations of fluid moments in terms of a gyro-center distribution function and gyro-center coordinates, which are called push-forward representations, are compared in the standard electrostatic gyrokinetic model. In the representation conventionally used to derive the gyrokinetic Poisson equation, the pull-back transformation of the gyro-center distribution function contains effects of the gyro-center transformation and therefore electrostatic potential fluctuations, which is described by the Poisson brackets between the distribution function and scalar functions generating the gyro-center transformation. Usually, only the lowest order solution of the generating function at first order is considered to explicitly derive the gyrokinetic Poisson equation. This is true in explicitly deriving representations of scalar fluid moments with polarization terms. One also recovers the particle diamagnetic flux at this order because it is associated with the guiding-center transformation. However, higher-order solutions are needed to derive finite Larmor radius terms of particle flux including the polarization drift flux from the conventional representation. On the other hand, the lowest order solution is sufficient for the other representation, in which the gyro-center transformation part is combined with the guiding-center one and the pull-back transformation of the distribution function does not appear.

  20. Linear and nonlinear verification of gyrokinetic microstability codes

    NASA Astrophysics Data System (ADS)

    Bravenec, R. V.; Candy, J.; Barnes, M.; Holland, C.

    2011-12-01

    Verification of nonlinear microstability codes is a necessary step before comparisons or predictions of turbulent transport in toroidal devices can be justified. By verification we mean demonstrating that a code correctly solves the mathematical model upon which it is based. Some degree of verification can be accomplished indirectly from analytical instability threshold conditions, nonlinear saturation estimates, etc., for relatively simple plasmas. However, verification for experimentally relevant plasma conditions and physics is beyond the realm of analytical treatment and must rely on code-to-code comparisons, i.e., benchmarking. The premise is that the codes are verified for a given problem or set of parameters if they all agree within a specified tolerance. True verification requires comparisons for a number of plasma conditions, e.g., different devices, discharges, times, and radii. Running the codes and keeping track of linear and nonlinear inputs and results for all conditions could be prohibitive unless there was some degree of automation. We have written software to do just this and have formulated a metric for assessing agreement of nonlinear simulations. We present comparisons, both linear and nonlinear, between the gyrokinetic codes GYRO [J. Candy and R. E. Waltz, J. Comput. Phys. 186, 545 (2003)] and GS2 [W. Dorland, F. Jenko, M. Kotschenreuther, and B. N. Rogers, Phys. Rev. Lett. 85, 5579 (2000)]. We do so at the mid-radius for the same discharge as in earlier work [C. Holland, A. E. White, G. R. McKee, M. W. Shafer, J. Candy, R. E. Waltz, L. Schmitz, and G. R. Tynan, Phys. Plasmas 16, 052301 (2009)]. The comparisons include electromagnetic fluctuations, passing and trapped electrons, plasma shaping, one kinetic impurity, and finite Debye-length effects. Results neglecting and including electron collisions (Lorentz model) are presented. We find that the linear frequencies with or without collisions agree well between codes, as do the time averages of

  1. Global Monte Carlo Simulation with High Order Polynomial Expansions

    SciTech Connect

    William R. Martin; James Paul Holloway; Kaushik Banerjee; Jesse Cheatham; Jeremy Conlin

    2007-12-13

    The functional expansion technique (FET) was recently developed for Monte Carlo simulation. The basic idea of the FET is to expand a Monte Carlo tally in terms of a high order expansion, the coefficients of which can be estimated via the usual random walk process in a conventional Monte Carlo code. If the expansion basis is chosen carefully, the lowest order coefficient is simply the conventional histogram tally, corresponding to a flat mode. This research project studied the applicability of using the FET to estimate the fission source, from which fission sites can be sampled for the next generation. The idea is that individual fission sites contribute to expansion modes that may span the geometry being considered, possibly increasing the communication across a loosely coupled system and thereby improving convergence over the conventional fission bank approach used in most production Monte Carlo codes. The project examined a number of basis functions, including global Legendre polynomials as well as “local” piecewise polynomials such as finite element hat functions and higher order versions. The global FET showed an improvement in convergence over the conventional fission bank approach. The local FET methods showed some advantages versus global polynomials in handling geometries with discontinuous material properties. The conventional finite element hat functions had the disadvantage that the expansion coefficients could not be estimated directly but had to be obtained by solving a linear system whose matrix elements were estimated. An alternative fission matrix-based response matrix algorithm was formulated. Studies were made of two alternative applications of the FET, one based on the kernel density estimator and one based on Arnoldi’s method of minimized iterations. Preliminary results for both methods indicate improvements in fission source convergence. These developments indicate that the FET has promise for speeding up Monte Carlo fission source

  2. GLOBAL PROPERTIES OF FULLY CONVECTIVE ACCRETION DISKS FROM LOCAL SIMULATIONS

    SciTech Connect

    Bodo, G.; Ponzo, F.; Rossi, P.; Cattaneo, F.; Mignone, A.

    2015-08-01

    We present an approach to deriving global properties of accretion disks from the knowledge of local solutions derived from numerical simulations based on the shearing box approximation. The approach consists of a two-step procedure. First, a local solution valid for all values of the disk height is constructed by piecing together an interior solution obtained numerically with an analytical exterior radiative solution. The matching is obtained by assuming hydrostatic balance and radiative equilibrium. Although in principle the procedure can be carried out in general, it simplifies considerably when the interior solution is fully convective. In these cases, the construction is analogous to the derivation of the Hayashi tracks for protostars. The second step consists of piecing together the local solutions at different radii to obtain a global solution. Here we use the symmetry of the solutions with respect to the defining dimensionless numbers—in a way similar to the use of homology relations in stellar structure theory—to obtain the scaling properties of the various disk quantities with radius.

  3. Precursors of deep moist convection in a subkilometer global simulation

    NASA Astrophysics Data System (ADS)

    Miyamoto, Yoshiaki; Yamaura, Tsuyoshi; Yoshida, Ryuji; Yashiro, Hisashi; Tomita, Hirofumi; Kajikawa, Yoshiyuki

    2016-10-01

    Deep moist convection in the atmosphere plays an important role in cloudy weather disturbances, such as hurricanes, and even in the global climate. The convection often causes disastrous heavy rainfall, and predicting such convection is therefore critical for both disaster prevention and climate projection. Although the key parameters for convection have been pointed out, understanding the preprocesses of convection is a challenging issue. Here we identified the precursors of convection by analyzing a global simulated data set with very high resolution in time and space. We found that the mass convergence near the Earth's surface changed significantly several minutes before the initiation of early convection (the formation of cumulus clouds), which occurred with the increase in the convective available potential energy (CAPE). Decomposition of the statistical data revealed that a higher-CAPE environment resulted in stronger convection than in the stronger-convergence case. Furthermore, for the stronger-convergence case, the precursor was detected earlier than the total average (10-15 min before the initiation), whereas the amplitude of maximum velocity was not so strong as the higher-CAPE case. This suggests that the strength of convection is connected with CAPE, and the predictability is sensitive to the convergence.

  4. Gyrokinetic turbulence cascade via predator-prey interactions between different scales

    SciTech Connect

    Kobayashi, Sumire Gurcan, Ozgur D.

    2015-05-15

    Gyrokinetic simulations in a closed fieldline geometry are presented to explore the physics of nonlinear transfer in plasma turbulence. As spontaneously formed zonal flows and small-scale turbulence demonstrate “predator-prey” dynamics, a particular cascade spectrum emerges. The electrostatic potential and the density spectra appear to be in good agreement with the simple theoretical prediction based on Charney-Hasegawa-Mima equation | ϕ{sup ~}{sub k} |{sup 2}∼| n{sup ~}{sub k} |{sup 2}∝k{sup −3}/(1+k{sup 2}){sup 2}, with the spectra becoming anisotropic at small scales. The results indicate that the disparate scale interactions, in particular, the refraction and shearing of larger scale eddies by the self-consistent zonal flows, dominate over local interactions, and contrary to the common wisdom, the comprehensive scaling relation is created even within the energy injection region.

  5. Structure of Plasma Heating in Gyrokinetic Alfvénic Turbulence

    NASA Astrophysics Data System (ADS)

    Navarro, Alejandro Bañón; Teaca, Bogdan; Told, Daniel; Groselj, Daniel; Crandall, Paul; Jenko, Frank

    2016-12-01

    We analyze plasma heating in weakly collisional kinetic Alfvén wave turbulence using high resolution gyrokinetic simulations spanning the range of scales between the ion and the electron gyroradii. Real space structures that have a higher than average heating rate are shown not to be confined to current sheets. This novel result is at odds with previous studies, which use the electromagnetic work in the local electron fluid frame, i.e., J .(E +ve×B ) , as a proxy for turbulent dissipation to argue that heating follows the intermittent spatial structure of the electric current. Furthermore, we show that electrons are dominated by parallel heating while the ions prefer the perpendicular heating route. We comment on the implications of the results presented here.

  6. Status of the 5D gyrokinetic code COGENT and its initial applications

    NASA Astrophysics Data System (ADS)

    Lee, Wonjae; Dorf, M.; Dorr, M.; Cohen, R.; Ghosh, D.; Rognlien, T.; Hittinger, J.; Umansky, M.; Krasheninnikov, S.

    2016-10-01

    We report recent progress with the development of the 5D (3D configuration and 2D velocity space) version of the full-f continuum gyrokinetic code COGENT. The original 2D configuration space has been successfully extended to 3D, with the Cartesian (slab) geometry chosen for verification and initial applications. The code has been successfully verified with drift-wave simulations including drift-kinetic equations for both electrons and ions coupled to the long-wavelength limit of the Gyro-Poisson equation. The initial application of the 5D COGENT is focused on addressing kinetic effects of drift-wave instabilities (e.g., universal instability) on blob dynamics in tokamak edge plasmas. Work performed for USDOE, at UCSD under Grants DE-FG02-04ER54739 and DE-SC0010413, and at LLNL under contract DE-AC52-07NA27344 and under Livermore Graduate Scholar Program.

  7. Collision-dependent power law scalings in two dimensional gyrokinetic turbulence

    SciTech Connect

    Cerri, S. S. Bañón Navarro, A.; Told, D.; Jenko, F.

    2014-08-15

    Nonlinear gyrokinetics provides a suitable framework to describe short-wavelength turbulence in magnetized laboratory and astrophysical plasmas. In the electrostatic limit, this system is known to exhibit a free energy cascade towards small scales in (perpendicular) real and/or velocity space. The dissipation of free energy is always due to collisions (no matter how weak the collisionality), but may be spread out across a wide range of scales. Here, we focus on freely decaying two dimensional electrostatic turbulence on sub-ion-gyroradius scales. An existing scaling theory for the turbulent cascade in the weakly collisional limit is generalized to the moderately collisional regime. In this context, non-universal power law scalings due to multiscale dissipation are predicted, and this prediction is confirmed by means of direct numerical simulations.

  8. The Hamiltonian structure and Euler-Poincare formulation of the Vlasov-Maxwell and gyrokinetic systems

    SciTech Connect

    Squire, J.; Tang, W. M.; Qin, H.; Chandre, C.

    2013-02-15

    We present a new variational principle for the gyrokinetic system, similar to the Maxwell-Vlasov action presented in H. Cendra et al., [J. Math. Phys. 39, 3138 (1998)]. The variational principle is in the Eulerian frame and based on constrained variations of the phase space fluid velocity and particle distribution function. Using a Legendre transform, we explicitly derive the field theoretic Hamiltonian structure of the system. This is carried out with a modified Dirac theory of constraints, which is used to construct meaningful brackets from those obtained directly from Euler-Poincare theory. Possible applications of these formulations include continuum geometric integration techniques, large-eddy simulation models, and Casimir type stability methods.

  9. Extension of GTC Capability for Simulating Non-Axisymmetric Systems

    NASA Astrophysics Data System (ADS)

    Holod, Ihor; Spong, Donald

    2014-10-01

    Effects of magnetic field non-axisymmetry are important for all magnetic confinement systems, including tokamaks, stellarators, and reversed field pinches. In this work we present recent upgrade of GTC global gyrokinetic model to use general 3D toroidal equilibria and to study the associated phenomena. We have initially applied new capability to simulate electrostatic ITG, and fast ion driven electromagnetic TAE modes in the LHD stellarator. This work is supported by the US Department of Energy under Contract DE-AC05-00OR22725 with UT-Battelle, LLC and under the US DOE SciDAC GSEP Center.

  10. Gyrokinetic study of the impact of the electron to ion heating ratio on the turbulent diffusion of highly charged impurities

    SciTech Connect

    Angioni, C.

    2015-10-15

    A gyrokinetic study based on numerical and analytical calculations is presented, which computes the dependence of the turbulent diffusion of highly charged impurities on the ratio of the electron to the ion heat flux of the plasma. Nonlinear simulations show that the size of the turbulent diffusion of heavy impurities can vary by one order of magnitude with fixed total heat flux and is an extremely sensitive function of the electron to ion heat flux ratio. Numerical linear calculations are found to reproduce the nonlinear results. Thereby, a quasi-linear analytical approach is used to explain the origin of this dependence.

  11. SOLAR WIND COLLISIONAL AGE FROM A GLOBAL MAGNETOHYDRODYNAMICS SIMULATION

    SciTech Connect

    Chhiber, R; Usmanov, AV; Matthaeus, WH; Goldstein, ML

    2016-04-10

    Simple estimates of the number of Coulomb collisions experienced by the interplanetary plasma to the point of observation, i.e., the “collisional age”, can be usefully employed in the study of non-thermal features of the solar wind. Usually these estimates are based on local plasma properties at the point of observation. Here we improve the method of estimation of the collisional age by employing solutions obtained from global three-dimensional magnetohydrodynamics simulations. This enables evaluation of the complete analytical expression for the collisional age without using approximations. The improved estimation of the collisional timescale is compared with turbulence and expansion timescales to assess the relative importance of collisions. The collisional age computed using the approximate formula employed in previous work is compared with the improved simulation-based calculations to examine the validity of the simplified formula. We also develop an analytical expression for the evaluation of the collisional age and we find good agreement between the numerical and analytical results. Finally, we briefly discuss the implications for an improved estimation of collisionality along spacecraft trajectories, including Solar Probe Plus.

  12. Simulation of 3D Global Wave Propagation Through Geodynamic Models

    NASA Astrophysics Data System (ADS)

    Schuberth, B.; Piazzoni, A.; Bunge, H.; Igel, H.; Steinle-Neumann, G.

    2005-12-01

    This project aims at a better understanding of the forward problem of global 3D wave propagation. We use the spectral element program "SPECFEM3D" (Komatitsch and Tromp, 2002a,b) with varying input models of seismic velocities derived from mantle convection simulations (Bunge et al., 2002). The purpose of this approach is to obtain seismic velocity models independently from seismological studies. In this way one can test the effects of varying parameters of the mantle convection models on the seismic wave field. In order to obtain the seismic velocities from the temperature field of the geodynamical simulations we follow a mineral physics approach. Assuming a certain mantle composition (e.g. pyrolite with CMASF composition) we compute the stable phases for each depth (i.e. pressure) and temperature by system Gibbs free energy minimization. Elastic moduli and density are calculated from the equations of state of the stable mineral phases. For this we use a mineral physics database derived from calorimetric experiments (enthalphy and entropy of formation, heat capacity) and EOS parameters.

  13. Nonlinear Gyrokinetics: A Powerful Tool for the Description of Microturbulence in Magnetized Plasmas

    SciTech Connect

    John E. Krommes

    2010-09-27

    Gyrokinetics is the description of low-frequency dynamics in magnetized plasmas. In magnetic-confinement fusion, it provides the most fundamental basis for numerical simulations of microturbulence; there are astrophysical applications as well. In this tutorial, a sketch of the derivation of the novel dynamical system comprising the nonlinear gyrokinetic (GK) equation (GKE) and the coupled electrostatic GK Poisson equation will be given by using modern Lagrangian and Lie perturbation methods. No background in plasma physics is required in order to appreciate the logical development. The GKE describes the evolution of an ensemble of gyrocenters moving in a weakly inhomogeneous background magnetic field and in the presence of electromagnetic perturbations with wavelength of the order of the ion gyroradius. Gyrocenters move with effective drifts, which may be obtained by an averaging procedure that systematically, order by order, removes gyrophase dependence. To that end, the use of the Lagrangian differential one-form as well as the content and advantages of Lie perturbation theory will be explained. The electromagnetic fields follow via Maxwell's equations from the charge and current density of the particles. Particle and gyrocenter densities differ by an important polarization effect. That is calculated formally by a "pull-back" (a concept from differential geometry) of the gyrocenter distribution to the laboratory coordinate system. A natural truncation then leads to the closed GK dynamical system. Important properties such as GK energy conservation and fluctuation noise will be mentioned briefly, as will the possibility (and diffculties) of deriving nonlinear gyro fluid equations suitable for rapid numerical solution -- although it is probably best to directly simulate the GKE. By the end of the tutorial, students should appreciate the GKE as an extremely powerful tool and will be prepared for later lectures describing its applications to physical problems.

  14. Global-Scale Hydrology: Simple Characterization of Complex Simulation

    NASA Technical Reports Server (NTRS)

    Koster, Randal D.

    1999-01-01

    Atmospheric general circulation models (AGCMS) are unique and valuable tools for the analysis of large-scale hydrology. AGCM simulations of climate provide tremendous amounts of hydrological data with a spatial and temporal coverage unmatched by observation systems. To the extent that the AGCM behaves realistically, these data can shed light on the nature of the real world's hydrological cycle. In the first part of the seminar, I will describe the hydrological cycle in a typical AGCM, with some emphasis on the validation of simulated precipitation against observations. The second part of the seminar will focus on a key goal in large-scale hydrology studies, namely the identification of simple, overarching controls on hydrological behavior hidden amidst the tremendous amounts of data produced by the highly complex AGCM parameterizations. In particular, I will show that a simple 50-year-old climatological relation (and a recent extension we made to it) successfully predicts, to first order, both the annual mean and the interannual variability of simulated evaporation and runoff fluxes. The seminar will conclude with an example of a practical application of global hydrology studies. The accurate prediction of weather statistics several months in advance would have tremendous societal benefits, and conventional wisdom today points at the use of coupled ocean-atmosphere-land models for such seasonal-to-interannual prediction. Understanding the hydrological cycle in AGCMs is critical to establishing the potential for such prediction. Our own studies show, among other things, that soil moisture retention can lead to significant precipitation predictability in many midlatitude and tropical regions.

  15. Differential rotation in solar-like stars from global simulations

    SciTech Connect

    Guerrero, G.; Kosovichev, A. G.; Smolarkiewicz, P. K.; Mansour, N. N. E-mail: sasha@sun.stanford.edu E-mail: nagi.n.mansour@nasa.gov

    2013-12-20

    To explore the physics of large-scale flows in solar-like stars, we perform three-dimensional anelastic simulations of rotating convection for global models with stratification resembling the solar interior. The numerical method is based on an implicit large-eddy simulation approach designed to capture effects from non-resolved small scales. We obtain two regimes of differential rotation, with equatorial zonal flows accelerated either in the direction of rotation (solar-like) or in the opposite direction (anti-solar). While the models with the solar-like differential rotation tend to produce multiple cells of meridional circulation, the models with anti-solar differential rotation result in only one or two meridional cells. Our simulations indicate that the rotation and large-scale flow patterns critically depend on the ratio between buoyancy and Coriolis forces. By including a sub-adiabatic layer at the bottom of the domain, corresponding to the stratification of a radiative zone, we reproduce a layer of strong radial shear similar to the solar tachocline. Similarly, enhanced super-adiabaticity at the top results in a near-surface shear layer located mainly at lower latitudes. The models reveal a latitudinal entropy gradient localized at the base of the convection zone and in the stable region, which, however, does not propagate across the convection zone. In consequence, baroclinicity effects remain small, and the rotation isocontours align in cylinders along the rotation axis. Our results confirm the alignment of large convective cells along the rotation axis in the deep convection zone and suggest that such 'banana-cell' pattern can be hidden beneath the supergranulation layer.

  16. A 20-year simulated climatology of global dust aerosol deposition.

    PubMed

    Zheng, Yu; Zhao, Tianliang; Che, Huizheng; Liu, Yu; Han, Yongxiang; Liu, Chong; Xiong, Jie; Liu, Jianhui; Zhou, Yike

    2016-07-01

    Based on a 20-year (1991-2010) simulation of dust aerosol deposition with the global climate model CAM5.1 (Community Atmosphere Model, version 5.1), the spatial and temporal variations of dust aerosol deposition were analyzed using climate statistical methods. The results indicated that the annual amount of global dust aerosol deposition was approximately 1161±31Mt, with a decreasing trend, and its interannual variation range of 2.70% over 1991-2010. The 20-year average ratio of global dust dry to wet depositions was 1.12, with interannual variation of 2.24%, showing the quantity of dry deposition of dust aerosol was greater than dust wet deposition. High dry deposition was centered over continental deserts and surrounding regions, while wet deposition was a dominant deposition process over the North Atlantic, North Pacific and northern Indian Ocean. Furthermore, both dry and wet deposition presented a zonal distribution. To examine the regional changes of dust aerosol deposition on land and sea areas, we chose the North Atlantic, Eurasia, northern Indian Ocean, North Pacific and Australia to analyze the interannual and seasonal variations of dust deposition and dry-to-wet deposition ratio. The deposition amounts of each region showed interannual fluctuations with the largest variation range at around 26.96% in the northern Indian Ocean area, followed by the North Pacific (16.47%), Australia (9.76%), North Atlantic (9.43%) and Eurasia (6.03%). The northern Indian Ocean also had the greatest amplitude of interannual variation in dry-to-wet deposition ratio, at 22.41%, followed by the North Atlantic (9.69%), Australia (6.82%), North Pacific (6.31%) and Eurasia (4.36%). Dust aerosol presented a seasonal cycle, with typically strong deposition in spring and summer and weak deposition in autumn and winter. The dust deposition over the northern Indian Ocean exhibited the greatest seasonal change range at about 118.00%, while the North Atlantic showed the lowest seasonal

  17. Global cloud-permitting simulations of Typhoon Fengshen (2008)

    NASA Astrophysics Data System (ADS)

    Nasuno, Tomoe; Yamada, Hiroyuki; Nakano, Masuo; Kubota, Hisayuki; Sawada, Masahiro; Yoshida, Ryuji

    2016-12-01

    Large-scale fields and inner-core processes relevant to the formation and intensification of Typhoon Fengshen (2008) were examined by simulations using a global nonhydrostatic model with a cloud-permitting resolution. Five runs were performed by varying the cloud microphysics or initial condition settings. In three out of five runs, a middle tropospheric trough developed within a few days following a large-scale latent heat release, which enabled the successive occurrence of deep convective events within the 50-km radius of the incipient disturbance and subsequent tropical cyclone (TC) formation. In the run initialized by altering the analysis dataset, collocation between latent heat release and the large-scale gyre was less evident, and neither the trough nor a TC developed. In the run with weaker latent heating in the lower troposphere, the trough was weak and TC formation was significantly delayed. These results indicate that the superposition of large-scale disturbances in the lower and middle troposphere and their linkage through convective enhancement played an important role in the genesis of Fengshen by preconditioning the establishment of a deep upright inner core.

  18. Global Citizens Are Made, Not Born: Multiclass Role-Playing Simulation of Global Decision Making

    ERIC Educational Resources Information Center

    Levintova, Ekaterina; Johnson, Terri; Scheberle, Denise; Vonck, Kevin

    2011-01-01

    Globalization, global citizenship, and political engagement have become such buzzwords and cliches that we often lose the sense of their meaning. Global citizenship in particular is an elusive concept to operationalize. This article proposes to look at three dimensions of global citizenship: legal (rights and obligations), psychological…

  19. Global simulation of aromatic volatile organic compounds in the atmosphere

    NASA Astrophysics Data System (ADS)

    Cabrera Perez, David; Taraborrelli, Domenico; Pozzer, Andrea

    2015-04-01

    Among the large number of chemical compounds in the atmosphere, the organic group plays a key role in the tropospheric chemistry. Specifically the subgroup called aromatics is of great interest. Aromatics are the predominant trace gases in urban areas due to high emissions, primarily by vehicle exhausts and fuel evaporation. They are also present in areas where biofuel is used (i.e residential wood burning). Emissions of aromatic compounds are a substantial fraction of the total emissions of the volatile organic compounds (VOC). Impact of aromatics on human health is very important, as they do not only contribute to the ozone formation in the urban environment, but they are also highly toxic themselves, especially in the case of benzene which is able to trigger a range of illness under long exposure, and of nitro-phenols which cause detrimental for humans and vegetation even at very low concentrations. The aim of this work is to assess the atmospheric impacts of aromatic compounds on the global scale. The main goals are: lifetime and budget estimation, mixing ratios distribution, net effect on ozone production and OH loss for the most emitted aromatic compounds (benzene, toluene, xylenes, ethylbenzene, styrene and trimethylbenzenes). For this purpose, we use the numerical chemistry and climate simulation ECHAM/MESSy Atmospheric Chemistry (EMAC) model to build the global atmospheric budget for the most emitted and predominant aromatic compounds in the atmosphere. A set of emissions was prepared in order to include biomass burning, vegetation and anthropogenic sources of aromatics into the model. A chemical mechanism based on the Master Chemical Mechanism (MCM) was developed to describe the chemical oxidation in the gas phase of these aromatic compounds. MCM have been reduced in terms of number of chemical equation and species in order to make it affordable in a 3D model. Additionally other features have been added, for instance the production of HONO via ortho

  20. Towards the optimization of a gyrokinetic Particle-In-Cell (PIC) code on large-scale hybrid architectures

    NASA Astrophysics Data System (ADS)

    Ohana, N.; Jocksch, A.; Lanti, E.; Tran, T. M.; Brunner, S.; Gheller, C.; Hariri, F.; Villard, L.

    2016-11-01

    With the aim of enabling state-of-the-art gyrokinetic PIC codes to benefit from the performance of recent multithreaded devices, we developed an application from a platform called the “PIC-engine” [1, 2, 3] embedding simplified basic features of the PIC method. The application solves the gyrokinetic equations in a sheared plasma slab using B-spline finite elements up to fourth order to represent the self-consistent electrostatic field. Preliminary studies of the so-called Particle-In-Fourier (PIF) approach, which uses Fourier modes as basis functions in the periodic dimensions of the system instead of the real-space grid, show that this method can be faster than PIC for simulations with a small number of Fourier modes. Similarly to the PIC-engine, multiple levels of parallelism have been implemented using MPI+OpenMP [2] and MPI+OpenACC [1], the latter exploiting the computational power of GPUs without requiring complete code rewriting. It is shown that sorting particles [3] can lead to performance improvement by increasing data locality and vectorizing grid memory access. Weak scalability tests have been successfully run on the GPU-equipped Cray XC30 Piz Daint (at CSCS) up to 4,096 nodes. The reduced time-to-solution will enable more realistic and thus more computationally intensive simulations of turbulent transport in magnetic fusion devices.

  1. Gyrokinetic study of turbulent convection of heavy impurities in tokamak plasmas at comparable ion and electron heat fluxes

    NASA Astrophysics Data System (ADS)

    Angioni, C.; Bilato, R.; Casson, F. J.; Fable, E.; Mantica, P.; Odstrcil, T.; Valisa, M.; ASDEX Upgrade Team; Contributors, JET

    2017-02-01

    In tokamaks, the role of turbulent transport of heavy impurities, relative to that of neoclassical transport, increases with increasing size of the plasma, as clarified by means of general scalings, which use the ITER standard scenario parameters as reference, and by actual results from a selection of discharges from ASDEX Upgrade and JET. This motivates the theoretical investigation of the properties of the turbulent convection of heavy impurities by nonlinear gyrokinetic simulations in the experimentally relevant conditions of comparable ion and electron heat fluxes. These conditions also correspond to an intermediate regime between dominant ion temperature gradient turbulence and trapped electron mode turbulence. At moderate plasma toroidal rotation, the turbulent convection of heavy impurities, computed with nonlinear gyrokinetic simulations, is found to be directed outward, in contrast to that obtained by quasi-linear calculations based on the most unstable linear mode, which is directed inward. In this mixed turbulence regime, with comparable electron and ion heat fluxes, the nonlinear results of the impurity transport can be explained by the coexistence of both ion temperature gradient and trapped electron modes in the turbulent state, both contributing to the turbulent convection and diffusion of the impurity. The impact of toroidal rotation on the turbulent convection is also clarified.

  2. Global Simulations of Galactic Winds Including Cosmic-ray Streaming

    NASA Astrophysics Data System (ADS)

    Ruszkowski, Mateusz; Yang, H.-Y. Karen; Zweibel, Ellen

    2017-01-01

    Galactic outflows play an important role in galactic evolution. Despite their importance, a detailed understanding of the physical mechanisms responsible for the driving of these winds is lacking. In an effort to gain more insight into the nature of these flows, we perform global three-dimensional magnetohydrodynamical simulations of an isolated Milky Way-size starburst galaxy. We focus on the dynamical role of cosmic rays (CRs) injected by supernovae, and specifically on the impact of the streaming and anisotropic diffusion of CRs along the magnetic fields. We find that these microphysical effects can have a significant effect on the wind launching and mass loading factors, depending on the details of the plasma physics. Due to the CR streaming instability, CRs propagating in the interstellar medium scatter on self-excited Alfvén waves and couple to the gas. When the wave growth due to the streaming instability is inhibited by some damping process, such as turbulent damping, the coupling of CRs to the gas is weaker and their effective propagation speed faster than the Alfvén speed. Alternatively, CRs could scatter from “extrinsic turbulence” that is driven by another mechanism. We demonstrate that the presence of moderately super-Alfvénic CR streaming enhances the efficiency of galactic wind driving. Cosmic rays stream away from denser regions near the galactic disk along partially ordered magnetic fields and in the process accelerate more tenuous gas away from the galaxy. For CR acceleration efficiencies broadly consistent with the observational constraints, CRs reduce the galactic star formation rates and significantly aid in launching galactic winds.

  3. Research highlights of the global modeling and simulation branch for 1986-1987

    NASA Technical Reports Server (NTRS)

    Baker, Wayman (Editor); Susskind, Joel (Editor); Pfaendtner, James (Editor); Randall, David (Editor); Atlas, Robert (Editor)

    1988-01-01

    This document provides a summary of the research conducted in the Global Modeling and Simulation Branch and highlights the most significant accomplishments in 1986 to 1987. The Branch has been the focal point for global weather and climate prediction research in the Laboratory for Atmospheres through the retrieval and use of satellite data, the development of global models and data assimilation techniques, the simulation of future observing systems, and the performance of atmospheric diagnostic studies.

  4. Gyro-water-bag approach in nonlinear gyrokinetic turbulence

    SciTech Connect

    Besse, Nicolas Bertrand, Pierre

    2009-06-20

    Turbulent transport is a key issue for controlled thermonuclear fusion based on magnetic confinement. The thermal confinement of a magnetized fusion plasma is essentially determined by the turbulent heat conduction across the equilibrium magnetic field. It has long been acknowledged, that the prediction of turbulent transport requires to solve Vlasov-type gyrokinetic equations. Although the kinetic description is more accurate than fluid models (MHD, gyro-fluid), because among other things it takes into account nonlinear resonant wave-particle interaction, kinetic modeling has the drawback of a huge computer resource request. An unifying approach consists in considering water-bag-like weak solutions of kinetic collisionless equations, which allow to reduce the full kinetic Vlasov equation into a set of hydrodynamic equations, while keeping its kinetic behaviour. As a result this exact reduction induces a multi-fluid numerical resolution cost. Therefore finding water-bag-like weak solutions of the gyrokinetic equations leads to the birth of the gyro-water-bag model. This model is suitable for studying linear and nonlinear low-frequency micro-instabilities and the associated anomalous transport in magnetically-confined plasmas. The present paper addresses the derivation of the nonlinear gyro-water-bag model, its quasilinear approximation and their numerical approximations by Runge-Kutta semi-Lagrangian methods and Runge-Kutta discontinuous Galerkin schemes respectively.

  5. Properties of Discontinuous Galerkin Algorithms and Implications for Edge Gyrokinetics

    NASA Astrophysics Data System (ADS)

    Hammett, G. W.; Hakim, A.; Shi, E. L.; Abel, I. G.; Stoltzfus-Dueck, T.

    2015-11-01

    The continuum gyrokinetic code Gkeyll uses Discontinuous Galerkin (DG) algorithms, which have a lot of flexibility in the choice of basis functions and inner product norm that can be useful in designing algorithms for particular problems. Rather than use regular polynomial basis functions, we consider here Maxwellian-weighted basis functions (which have similarities to Gaussian radial basis functions). The standard Galerkin approach loses particle and energy conservation, but this can be restored with a particular weight for the inner product (this is equivalent to a Petrov-Galerkin method). This allows a full- F code to have some benefits similar to the Gaussian quadrature used in gyrokinetic δf codes to integrate Gaussians times some polynomials exactly. In tests of Gkeyll for electromagnetic fluctuations, we found it is important to use consistent basis functions where the potential is in a higher-order continuity subspace of the space for the vector potential A| |. A regular projection method to this subspace is a non-local operation, while we show a self-adjoint averaging operator that can preserve locality and energy conservation. This does not introduce damping, but like gyro-averaging involves only the reactive part of the dynamics. Supported by the Max-Planck/Princeton Center for Plasma Physics, the SciDAC Center for the Study of Plasma Microturbulence, and DOE Contract DE-AC02-09CH11466.

  6. Fully Electromagnetic Nonlinear Gyrokinetic Equations for Tokamak Edge Turbulence

    SciTech Connect

    Hahm, T. S.; Wang, Lu; Madsen, J.

    2008-08-01

    An energy conserving set of the fully electromagnetic nonlinear gyrokinetic Vlasov equation and Maxwell's equations, which is applicable to both L-mode turbulence with large amplitude and H-mode turbulence in the presence of high E Χ B shear has been derived. The phase-space action variational Lie perturbation method ensures the preservation of the conservation laws of the underlying Vlasov-Maxwell system. Our generalized ordering takes ρi<< ρθ¡ ~ LE ~ Lp << R (here ρi is the thermal ion Larmor radius and ρθ¡ = B/Bθ] ρi), as typically observed in the tokamak H-mode edge, with LE and Lp being the radial electric field and pressure gradient lengths. We take κ perpendicular to ρi ~ 1 for generality, and keep the relative fluctuation amplitudes eδφ /Τi ~ δΒ / Β up to the second order. Extending the electrostatic theory in the presence of high E Χ B shear [Hahm, Phys. Plasmas 3, 4658 (1996)], contributions of electromagnetic fluctuations to the particle charge density and current are explicitly evaluated via pull-back transformation from the gyrocenter distribution function in the gyrokinetic Maxwell's equation.

  7. Linear signatures in nonlinear gyrokinetics: interpreting turbulence with pseudospectra

    NASA Astrophysics Data System (ADS)

    Hatch, D. R.; Jenko, F.; Bañón Navarro, A.; Bratanov, V.; Terry, P. W.; Pueschel, M. J.

    2016-07-01

    A notable feature of plasma turbulence is its propensity to retain features of the underlying linear eigenmodes in a strongly turbulent state—a property that can be exploited to predict various aspects of the turbulence using only linear information. In this context, this work examines gradient-driven gyrokinetic plasma turbulence through three lenses—linear eigenvalue spectra, pseudospectra, and singular value decomposition (SVD). We study a reduced gyrokinetic model whose linear eigenvalue spectra include ion temperature gradient driven modes, stable drift waves, and kinetic modes representing Landau damping. The goal is to characterize in which ways, if any, these familiar ingredients are manifest in the nonlinear turbulent state. This pursuit is aided by the use of pseudospectra, which provide a more nuanced view of the linear operator by characterizing its response to perturbations. We introduce a new technique whereby the nonlinearly evolved phase space structures extracted with SVD are linked to the linear operator using concepts motivated by pseudospectra. Using this technique, we identify nonlinear structures that have connections to not only the most unstable eigenmode but also subdominant modes that are nonlinearly excited. The general picture that emerges is a system in which signatures of the linear physics persist in the turbulence, albeit in ways that cannot be fully explained by the linear eigenvalue approach; a non-modal treatment is necessary to understand key features of the turbulence.

  8. Gyrokinetic Studies of Resonant Magnetic Perturbation Effect on Microturbulence in DIII-D H-Mode Pedestal

    NASA Astrophysics Data System (ADS)

    Holod, Ihor; Lin, Zhihong; Taimourzadeh, Sam; Nazikian, Raffi; Spong, Donald; Wingen, Andreas

    2016-10-01

    Vacuum Resonant Magnetic Perturbation (RMP) applied to otherwise axisymmetric plasmas for the purpose of ELM mitigation produce in general a combination of non resonant effects preserving closed flux surfaces (kink response) and resonant effects that introduce magnetic islands. The effect of the plasma kink response on the stability and transport of edge turbulence is studied using the gyrokinetic code GTC for a DIII-D discharge with applied n=2 vacuum RMP. Three reference equilibria were modeled using VMEC code, based on DIII-D shot 158103: axisymmetric (no RMP) equilibrium, n=2 RMP, and artificially amplified RMPx10 equilibria. Gyrokinetic simulations reveal no increase of growth rates for electrostatic driftwave instability and electromagnetic kinetic-ballooning mode in the presence of the RMP. The effect of RMP on zonal flow damping is found to be insufficient to modify turbulent transport. Therefore, the plasma kink response to the RMP cannot account for the change in the turbulence level seen in experiments with suppressed ELMs. These results demonstrate that other physics must be controlling the transition in confinement responsible for ELM suppression. Work is supported by General Atomics subcontract 4500055243, U.S. DOE Grant DE-SC0010416 and DE-SC0013804, and by General Atomics collaboration agreement under DOE Grant DE-FG03-94ER54271.

  9. Gyrokinetic electromagnetic isotope effect in ITER-hybrid plasmas and validation

    NASA Astrophysics Data System (ADS)

    Goerler, Tobias; Garcia, Jeronimo; Jenko, Frank

    2015-11-01

    A number of high-realism simulations with the gyrokinetic turbulence code GENE have been performed recently for comparison with experimental measurements in, e.g., ASDEX Upgrade and DIII-D. Some of these successful validation studies will be reviewed briefly as basis for subsequent predictive simulations for a particular ITER hybrid scenario. Here, comprehensive local GENE simulations have been employed considering the multi-component character of such plasmas including impurities, fuel ions, helium ash, up to two fast ion species as well as electromagnetic fluctuations, inter- and intra-species collisions, and external shear effects. The fluxes are in general in good agreement with those in the above ITER study performed with the CRONOS code suite. A particular subject of interest is the turbulent transport comparison between deuterium-tritium (DT) plasmas and pure deuterium (DD) fuel as mostly used in present-day experiments. Here, a strong heat flux drop from DD to DT plasmas can be observed which is in line with experimental evidence found at TFTR and JET. This contribution may hence help to gain a better understanding of this so-called isotope effect and improve projections for future ITER DD- and DT-plasma studies.

  10. A global optimization algorithm for simulation-based problems via the extended DIRECT scheme

    NASA Astrophysics Data System (ADS)

    Liu, Haitao; Xu, Shengli; Wang, Xiaofang; Wu, Junnan; Song, Yang

    2015-11-01

    This article presents a global optimization algorithm via the extension of the DIviding RECTangles (DIRECT) scheme to handle problems with computationally expensive simulations efficiently. The new optimization strategy improves the regular partition scheme of DIRECT to a flexible irregular partition scheme in order to utilize information from irregular points. The metamodelling technique is introduced to work with the flexible partition scheme to speed up the convergence, which is meaningful for simulation-based problems. Comparative results on eight representative benchmark problems and an engineering application with some existing global optimization algorithms indicate that the proposed global optimization strategy is promising for simulation-based problems in terms of efficiency and accuracy.

  11. On the Existence of Canonical Gyrokinetic Variables for Chaotic Magnetic Fields

    SciTech Connect

    Nicolini, Piero; Tessarotto, Massimo

    2008-12-31

    The gyrokinetic description of particle dynamics faces a basic difficulty when a special type of canonical variables is sought, i.e., the so-called gyrokinetic canonical variables. These are defined in such a way that two of them are respectively identified with the gyrophase-angle, describing the fast particle gyration motion around magnetic field lines, and its canonically conjugate momentum. In this paper we intend to discuss the conditions of existence for these variables.

  12. High-resolution Global Crop Simulation Design and Implementation for Sustainability and Climate Change Analysis

    NASA Astrophysics Data System (ADS)

    Kang, S.; Kline, K.; Post, W.; Nichols, J.; Nair, S.; Singh, N.; Wang, D.; Wullschleger, S. D.; Izaurralde, R. C.

    2012-12-01

    International communities seek expanded understanding of the land use change issues associated with food and bioenergy production, and climate change; however, the existing assessments of large-scale deployment, utilization, and sustainability of crop production systems are insufficiently quantitative at the global scale. To undertake this broad analysis of large-scale crop production, an analysis framework to meet the challenges with a regionally and globally distributed agroecosystem model is needed. We designed a global modeling platform of crop production, consisting of five major components: (i) standardized global natural resources and management databases, ii) global simulation unit and management scenarios, iii) model calibration and validation, iv) high-performance computing (HPC) modeling, and v) simulation output processing and analysis. A case study with the HPC-EPIC model and a perennial bioenergy crop, switchgrass (Panicum virgatum L.) and global biomass productivity analysis on grassland was conducted to demonstrate the application of this platform. The results indicated that this modeling platform was effective to catch global productivity variability of switchgrass and applicable for the global analysis of crop production and sustainability. Future efforts include enhancing the databases of crops and implementing global simulations for various crops and studying impacts, adaptation and vulnerability of climate change. We anticipated this platform to provide effective tools and assessment data for international communities to conduct global analysis of crop production and sustainability associated with climate change issues.

  13. Toroidal Electromagnetic Particle-in-Cell Code with Gyro-kinetic Electron and Fully-kinetic ion

    NASA Astrophysics Data System (ADS)

    Lin, Jingbo; Zhang, Wenlu; Liu, Pengfei; Li, Ding

    2016-10-01

    A kinetic simulation model has been developed using gyro-kinetic electron and fully-kinetic ion by removing fast gyro motion of electrons using the Lie-transform perturbation theory. A particle-in-cell kinetic code is developed based on this model in general magnetic flux coordinate systems, which is particularly suitable for simulations of toroidally confined plasma. Single particle motion and field solver are successfully verified respectively. Integrated electrostatic benchmark, for example the lower-hybrid wave (LHW) and ion Bernstein wave (IBW), shows a good agreement with theoretical results. Preliminary electromagnetic benchmark of fast wave at lower hybrid frequency range is also presented. This code can be a first-principal tool to investigate high frequency nonlinear phenomenon, such as parametric decay instability, during lower-hybrid current drive (LHCD) and ion cyclotron radio frequency heating (ICRF) with complex geometry effect included. Supported by National Special Research Program of China For ITER and National Natural Science Foundation of China.

  14. The use of GRACE satellite data to validate the global hydrological cycle as simulated by a global climate model

    NASA Astrophysics Data System (ADS)

    Boening, Carmen; Demory, Marie-Estelle; Vidale, Pier Luigi; Wiese, David; Roberts, Malcolm; Schiemann, Reinhard; Mizielinski, Matthew; Watkins, Michael

    2015-04-01

    This study investigates the use of the Gravity Recovery and Climate Experiment (GRACE) data to validate the global hydrological cycle as simulated by an atmospheric General Circulation Model (GCM), particularly the transport of water from the ocean to the land and vice-versa. Until GRACE, no other observational data were available for such a robust assessment. Usually, moisture transport is calculated by using the water balance equations (e.g. Precipitation-Evaporation), or by using reanalysis data, which are known to have major issues related to the hydrological cycle. By comparing the decade-long record of Earth's gravity field variations measured by GRACE with the terrestrial water storage simulated by GCMs, we can compare the amplitude of the variability in water transport at inter-annual to decadal time scales at global and regional scales. This is an innovative approach to assess GCMs and understand the processes underlying changes in the water cycle. It is by improving our understanding of the mechanisms involved in the hydrological cycle that we will be able to build confidence in model simulations of the evolution of the hydrological cycle with climate change. We make use of the UPSCALE (UK on PRACE: weather resolving Simulations of Climate for globAL Environmental risk) campaign, a traceable hierarchy of global atmospheric simulations (based on the Met Office Unified Model, GA3 formulation), with mesh sizes ranging from 130 km to 25 km, for which five-member ensembles of 27-year, atmosphere-only integrations are available, using present-day forcing. We show here the ability of this climate model, at any resolution, to simulate the inter-annual variability of terrestrial water storage, compared to GRACE. We particularly find that the model is able to capture the regional distribution of changes in terrestrial water transport during El Nino Southern Oscillation events, implying its ability to import more or less water over land during a La Nina or an El

  15. Gyrokinetic studies of microinstabilities in the reversed field pinch

    SciTech Connect

    Carmody, D.; Pueschel, M. J.; Terry, P. W.

    2013-05-15

    An analytic equilibrium, the Toroidal Bessel Function Model, is used in conjunction with the gyrokinetic code GYRO to investigate the nature of microinstabilities in a reversed field pinch plasma. The effect of the normalized electron plasma pressure β on the characteristics of the microinstabilities is studied. At a β of 4.5%, a transition between an ion temperature gradient (ITG) and a microtearing mode is observed. Suppression of the ITG mode occurs as in the tokamak, through coupling to shear Alfvén waves, with a critical β for stability higher than its tokamak equivalent due to a shorter parallel connection length. A steep dependence of the microtearing growth rate on the temperature gradient suggests high profile stiffness. There is evidence for a collisionless microtearing mode. The properties of this mode are investigated, and it is found that electron curvature drift plays an important role in the instability.

  16. Gyrokinetic Theory for Arbitrary Wavelength Electromagnetic Modes in Tokamaks

    SciTech Connect

    Qin, H.; Rewoldt, G.; Tang, W.M.

    1997-10-01

    A linear gyrokinetic system for arbitrary wavelength electromagnetic modes is developed. A wide range of modes in inhomogeneous plasmas, such as the internal kink modes, the toroidal Alfvén eigenmode (TAE) modes, and the drift modes, can be recovered from this system. The inclusion of most of the interesting physical factors into a single framework enables us to look at many familiar modes simultaneously and thus to study the modifications of and the interactions between them in a systematic way. Especially, we are able to investigate self-consistently the kinetic MHD phenomena entirely from the kinetic side. Phase space Lagrangian Lie perturbation methods and a newly developed computer algebra package for vector analysis in general coordinate system are utilized in the analytical derivation. In tokamak geometries, a 2D finite element code has been developed and tested. In this paper, we present the basic theoretical formalism and some of the preliminary results.

  17. Monsoon Variability in the Arabian Sea from Global 0.08 deg HYCOM Simulations

    DTIC Science & Technology

    2015-09-30

    1 DISTRIBUTION STATEMENT A. Approved for public release; distribution is unlimited. Monsoon Variability in the Arabian Sea from Global 0.08...the sequence of events leading up to the early reversal of the western boundary current (WBC) circulation, we are using an existing forced global ...hybrid vertical coordinate system. The model simulation was forced with 0.5° Navy Operational Global Atmospheric Prediction (NOGAPS) fluxes for

  18. Global and local properties used as analyses tools for molecular-dynamics simulations

    NASA Astrophysics Data System (ADS)

    Bachlechner, Martina E.; Anderson, Jonas T.; Cao, Deng; Leonard, Robert H.; Owens, Eli T.; Schiffbauer, Jarrod E.; Burky, Melissa R.; Ducatman, Samuel C.; Guffey, Eric J.; Serrano Ramos2, Fernando

    2006-03-01

    Molecular dynamics simulations have been used to study mechanical failure in realistic interface materials. Averaging over the individual atoms' contributions yields local and global information including displacements, bond angles, strains, stress tensor components, and pair distribution functions. A combined analysis of global and local properties facilitates detailed insight in the mechanisms of failure, which will eventually guide on how to prevent failure of interfaces.

  19. Global Simulation of Bioenergy Crop Productivity: Analytical framework and Case Study for Switchgrass

    SciTech Connect

    Nair, S. Surendran; Nichols, Jeff A. {Cyber Sciences}; Post, Wilfred M; Wang, Dali; Wullschleger, Stan D; Kline, Keith L; Wei, Yaxing; Singh, Nagendra; Kang, Shujiang

    2014-01-01

    Contemporary global assessments of the deployment potential and sustainability aspects of biofuel crops lack quantitative details. This paper describes an analytical framework capable of meeting the challenges associated with global scale agro-ecosystem modeling. We designed a modeling platform for bioenergy crops, consisting of five major components: (i) standardized global natural resources and management data sets, (ii) global simulation unit and management scenarios, (iii) model calibration and validation, (iv) high-performance computing (HPC) modeling, and (v) simulation output processing and analysis. A case study with the HPC- Environmental Policy Integrated Climate model (HPC-EPIC) to simulate a perennial bioenergy crop, switchgrass (Panicum virgatum L.) and global biomass feedstock analysis on grassland demonstrates the application of this platform. The results illustrate biomass feedstock variability of switchgrass and provide insights on how the modeling platform can be expanded to better assess sustainable production criteria and other biomass crops. Feedstock potentials on global grasslands and within different countries are also shown. Future efforts involve developing databases of productivity, implementing global simulations for other bioenergy crops (e.g. miscanthus, energycane and agave), and assessing environmental impacts under various management regimes. We anticipated this platform will provide an exemplary tool and assessment data for international communities to conduct global analysis of biofuel biomass feedstocks and sustainability.

  20. Comparing the model-simulated global warming signal to observations using empirical estimates of unforced noise

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The comparison of observed global mean surface air temperature (GMT) change to the mean change simulated by climate models has received much attention. For a given global warming signal produced by a climate model ensemble, there exists an envelope of GMT values representing the range of possible un...

  1. Nonlinear particle simulation of ion cyclotron waves in toroidal geometry

    SciTech Connect

    Kuley, A. Lin, Z.; Bao, J.; Wei, X. S.; Xiao, Y.

    2015-12-10

    Global particle simulation model has been developed in this work to provide a first-principles tool for studying the nonlinear interactions of radio frequency (RF) waves with plasmas in tokamak. In this model, ions are considered as fully kinetic particles using the Vlasov equation and electrons are treated as guiding centers using the drift kinetic equation with realistic electron-to-ion mass ratio. Boris push scheme for the ion motion has been developed in the toroidal geometry using magnetic coordinates and successfully verified for the ion cyclotron and ion Bernstein waves in global gyrokinetic toroidal code (GTC). The nonlinear simulation capability is applied to study the parametric decay instability of a pump wave into an ion Bernstein wave side band and a low frequency ion cyclotron quasi mode.

  2. Nonlinear particle simulation of ion cyclotron waves in toroidal geometry

    NASA Astrophysics Data System (ADS)

    Kuley, A.; Bao, J.; Lin, Z.; Wei, X. S.; Xiao, Y.

    2015-12-01

    Global particle simulation model has been developed in this work to provide a first-principles tool for studying the nonlinear interactions of radio frequency (RF) waves with plasmas in tokamak. In this model, ions are considered as fully kinetic particles using the Vlasov equation and electrons are treated as guiding centers using the drift kinetic equation with realistic electron-to-ion mass ratio. Boris push scheme for the ion motion has been developed in the toroidal geometry using magnetic coordinates and successfully verified for the ion cyclotron and ion Bernstein waves in global gyrokinetic toroidal code (GTC). The nonlinear simulation capability is applied to study the parametric decay instability of a pump wave into an ion Bernstein wave side band and a low frequency ion cyclotron quasi mode.

  3. Relationship between global mean sea-level and global mean temperature in a climate simulation of the past millennium

    NASA Astrophysics Data System (ADS)

    Storch, Hans Von; Zorita, Eduardo; González-Rouco, Jesús F.

    2008-11-01

    The possibility of using global mean near-surface temperature, its rate of change or the global mean ocean heat-flux as predictors to statistically estimate the change of global mean sea-level is explored in the context of a long climate simulation of the past millennium with the climate model ECHO-G. Such relationships have recently been proposed to by-pass the difficulty of estimating future sea-level changes based on simulations with coarse-resolution climate models. It is found that, in this simulation, a simple linear relationship between mean temperature and the rate of change of sea level does not exist. A regression parameter linking both variables, and estimated in sliding 120-year windows, varies widely along the simulation and, in some periods, even attains negative values. The ocean heat-flux and the rate-of-change of mean temperature seem to better capture the rate-of-change of sea level due to thermal expansion.

  4. Computational Approaches to Simulation and Optimization of Global Aircraft Trajectories

    NASA Technical Reports Server (NTRS)

    Ng, Hok Kwan; Sridhar, Banavar

    2016-01-01

    This study examines three possible approaches to improving the speed in generating wind-optimal routes for air traffic at the national or global level. They are: (a) using the resources of a supercomputer, (b) running the computations on multiple commercially available computers and (c) implementing those same algorithms into NASAs Future ATM Concepts Evaluation Tool (FACET) and compares those to a standard implementation run on a single CPU. Wind-optimal aircraft trajectories are computed using global air traffic schedules. The run time and wait time on the supercomputer for trajectory optimization using various numbers of CPUs ranging from 80 to 10,240 units are compared with the total computational time for running the same computation on a single desktop computer and on multiple commercially available computers for potential computational enhancement through parallel processing on the computer clusters. This study also re-implements the trajectory optimization algorithm for further reduction of computational time through algorithm modifications and integrates that with FACET to facilitate the use of the new features which calculate time-optimal routes between worldwide airport pairs in a wind field for use with existing FACET applications. The implementations of trajectory optimization algorithms use MATLAB, Python, and Java programming languages. The performance evaluations are done by comparing their computational efficiencies and based on the potential application of optimized trajectories. The paper shows that in the absence of special privileges on a supercomputer, a cluster of commercially available computers provides a feasible approach for national and global air traffic system studies.

  5. Methane Emissions From Global Paddy Rice Agriculture - a New Estimate Based on DNDC Model Simulations

    NASA Astrophysics Data System (ADS)

    Hagen, S. C.; Li, C.; Salas, W.; Ingraham, P.; Li, J.; Beach, R.; Frolking, S.

    2012-12-01

    Roughly one-quarter of global methane emissions to the atmosphere come from the agricultural sector. Agricultural emissions are dominated by livestock (ruminants) and paddy-rice agriculture. We report on a new estimate of global methane emissions from paddy rice c.2010, based on DNDC model simulations of rice cropping around the world. We first generated a global map of rice cropping at 0.5°-resolution, based on existing global crop maps and various other published data. For each 0.5° grid cell that has rice agriculture, we simulated all rice cropping systems that our mapping indicated to be occurring there - irrigated and/or rainfed; single-rice, double-rice, triple-rice, and/or rice-rotated with other upland crops - under local climate and soil conditions, with assumptions about crop management (e.g., fertilizer type and amount, irrigation, flooding frequency and duration, manure application, tillage, crop residue management). We estimate global paddy rice emissions at 23 Tg CH4/yr from 120 Mha of rice paddies (land area) and 160 Mha of rice cropping (harvested area) for the baseline management scenario. We also report on the spatial distribution of these emissions, and the impacts of various management alternatives (flooding methods, fertilizer types, crop residue incorporation etc.) on yield, soil carbon sequestration and emissions of methane and nitrous oxide. For example, simulations with continuous flooding on all paddies increased simulated global paddy rice emissions to 33 Tg CH4/yr, while simulations where all fertilizer was applied as ammonium sulfate reduced simulated global paddy rice emissions to about 19 Tg CH4/yr. Simulated global paddy rice yield was about 320 Tg C in grain.

  6. A Theoretical Study of the Global Geospace System Simulations

    NASA Technical Reports Server (NTRS)

    Hudson, Mary K.

    2002-01-01

    This report describes work undertaken by the principal investigator (PI) and her colleagues in three areas of research: Relativistic Electron Dynamics, Solar Energetic Particle Study, and ULF Wave Statistical Study. The researchers conducted three dimensional modeling of relativistic electron dynamics, simulated Solar Energetic Particles (SEP) trapping using a magnetohydrodynamic (MHD) code, and a study of Pc 5 magnetic pulsations.

  7. Water savings potentials of irrigation systems: dynamic global simulation

    NASA Astrophysics Data System (ADS)

    Jägermeyr, J.; Gerten, D.; Heinke, J.; Schaphoff, S.; Kummu, M.; Lucht, W.

    2015-04-01

    Global agricultural production is heavily sustained by irrigation, but irrigation system efficiencies are often surprisingly low. However, our knowledge of irrigation efficiencies is mostly confined to rough indicative estimates for countries or regions that do not account for spatio-temporal heterogeneity due to climate and other biophysical dependencies. To allow for refined estimates of global agricultural water use, and of water saving and water productivity potentials constrained by biophysical processes and also non-trivial downstream effects, we incorporated a dynamic representation of the three major irrigation systems (surface, sprinkler, and drip) into a process-based bio- and agrosphere model, LPJmL. Based on this enhanced model we provide a gridded worldmap of dynamically retrieved irrigation efficiencies reflecting differences in system types, crop types, climatic and hydrologic conditions, and overall crop management. We find pronounced regional patterns in beneficial irrigation efficiency (a refined irrigation efficiency indicator accounting for crop-productive water consumption only), due to differences in these features, with lowest values (< 30%) in South Asia and Sub-Saharan Africa and highest values (> 60%) in Europe and North America. We arrive at an estimate of global irrigation water withdrawal of 2396 km3 (2004-2009 average); irrigation water consumption is calculated to be 1212 km3, of which 511 km3 are non-beneficially consumed, i.e. lost through evaporation, interception, and conveyance. Replacing surface systems by sprinkler or drip systems could, on average across the world's river basins, reduce the non-beneficial consumption at river basin level by 54 and 76%, respectively, while maintaining the current level of crop yields. Accordingly, crop water productivity would increase by 9 and 15%, respectively, and by much more in specific regions such as in the Indus basin. This study significantly advances the global quantification of

  8. KEYNOTE: Simulation, computation, and the Global Nuclear Energy Partnership

    NASA Astrophysics Data System (ADS)

    Reis, Victor, Dr.

    2006-01-01

    Dr. Victor Reis delivered the keynote talk at the closing session of the conference. The talk was forward looking and focused on the importance of advanced computing for large-scale nuclear energy goals such as Global Nuclear Energy Partnership (GNEP). Dr. Reis discussed the important connections of GNEP to the Scientific Discovery through Advanced Computing (SciDAC) program and the SciDAC research portfolio. In the context of GNEP, Dr. Reis talked about possible fuel leasing configurations, strategies for their implementation, and typical fuel cycle flow sheets. A major portion of the talk addressed lessons learnt from ‘Science Based Stockpile Stewardship’ and the Accelerated Strategic Computing Initiative (ASCI) initiative and how they can provide guidance for advancing GNEP and SciDAC goals. Dr. Reis’s colorful and informative presentation included international proverbs, quotes and comments, in tune with the international flavor that is part of the GNEP philosophy and plan. He concluded with a positive and motivating outlook for peaceful nuclear energy and its potential to solve global problems. An interview with Dr. Reis, addressing some of the above issues, is the cover story of Issue 2 of the SciDAC Review and available at http://www.scidacreview.org This summary of Dr. Reis’s PowerPoint presentation was prepared by Institute of Physics Publishing, the complete PowerPoint version of Dr. Reis’s talk at SciDAC 2006 is given as a multimedia attachment to this summary.

  9. Global sensitivity analysis in stochastic simulators of uncertain reaction networks.

    PubMed

    Navarro Jimenez, M; Le Maître, O P; Knio, O M

    2016-12-28

    Stochastic models of chemical systems are often subjected to uncertainties in kinetic parameters in addition to the inherent random nature of their dynamics. Uncertainty quantification in such systems is generally achieved by means of sensitivity analyses in which one characterizes the variability with the uncertain kinetic parameters of the first statistical moments of model predictions. In this work, we propose an original global sensitivity analysis method where the parametric and inherent variability sources are both treated through Sobol's decomposition of the variance into contributions from arbitrary subset of uncertain parameters and stochastic reaction channels. The conceptual development only assumes that the inherent and parametric sources are independent, and considers the Poisson processes in the random-time-change representation of the state dynamics as the fundamental objects governing the inherent stochasticity. A sampling algorithm is proposed to perform the global sensitivity analysis, and to estimate the partial variances and sensitivity indices characterizing the importance of the various sources of variability and their interactions. The birth-death and Schlögl models are used to illustrate both the implementation of the algorithm and the richness of the proposed analysis method. The output of the proposed sensitivity analysis is also contrasted with a local derivative-based sensitivity analysis method classically used for this type of systems.

  10. Microbial legacies alter decomposition in response to simulated global change

    PubMed Central

    Martiny, Jennifer BH; Martiny, Adam C; Weihe, Claudia; Lu, Ying; Berlemont, Renaud; Brodie, Eoin L; Goulden, Michael L; Treseder, Kathleen K; Allison, Steven D

    2017-01-01

    Terrestrial ecosystem models assume that microbial communities respond instantaneously, or are immediately resilient, to environmental change. Here we tested this assumption by quantifying the resilience of a leaf litter community to changes in precipitation or nitrogen availability. By manipulating composition within a global change experiment, we decoupled the legacies of abiotic parameters versus that of the microbial community itself. After one rainy season, more variation in fungal composition could be explained by the original microbial inoculum than the litterbag environment (18% versus 5.5% of total variation). This compositional legacy persisted for 3 years, when 6% of the variability in fungal composition was still explained by the microbial origin. In contrast, bacterial composition was generally more resilient than fungal composition. Microbial functioning (measured as decomposition rate) was not immediately resilient to the global change manipulations; decomposition depended on both the contemporary environment and rainfall the year prior. Finally, using metagenomic sequencing, we showed that changes in precipitation, but not nitrogen availability, altered the potential for bacterial carbohydrate degradation, suggesting why the functional consequences of the two experiments may have differed. Predictions of how terrestrial ecosystem processes respond to environmental change may thus be improved by considering the legacies of microbial communities. PMID:27740610

  11. Visualization and analysis of eddies in a global ocean simulation

    SciTech Connect

    Williams, Sean J; Hecht, Matthew W; Petersen, Mark; Strelitz, Richard; Maltrud, Mathew E; Ahrens, James P; Hlawitschka, Mario; Hamann, Bernd

    2010-10-15

    Eddies at a scale of approximately one hundred kilometers have been shown to be surprisingly important to understanding large-scale transport of heat and nutrients in the ocean. Due to difficulties in observing the ocean directly, the behavior of eddies below the surface is not very well understood. To fill this gap, we employ a high-resolution simulation of the ocean developed at Los Alamos National Laboratory. Using large-scale parallel visualization and analysis tools, we produce three-dimensional images of ocean eddies, and also generate a census of eddy distribution and shape averaged over multiple simulation time steps, resulting in a world map of eddy characteristics. As expected from observational studies, our census reveals a higher concentration of eddies at the mid-latitudes than the equator. Our analysis further shows that mid-latitude eddies are thicker, within a range of 1000-2000m, while equatorial eddies are less than 100m thick.

  12. Fire emissions simulated by prescribing burned area observations in a global vegetation model

    NASA Astrophysics Data System (ADS)

    Khlystova, Iryna G.; Wilkenskjeld, Stiig; Kloster, Silvia

    2014-05-01

    The emissions of trace gases and aerosols from large vegetation fires into the atmosphere have an important climate impact. In this study we integrate observed burned area into a global vegetation model to derive global fire emissions. A global continuous burned area products provided by GFED (Global Fire Emissions Dataset) were obtained from MODIS (and pre-MODIS) satellites and are available for the time period 1997-2011. We integrate the global burned area product into the global vegetation model JSBACH, a land part of the Earth-System model developed at the Max Planck Institute for Meteorology. JSBACH simulates land biomass in terms of carbon, which can be combined with the satellite burned area information to derive fire carbon emissions. Some assumptions on fire fuel consumptions have to be made during the integration of satellite burned area into the JSBACH. This includes processes such as tree mortality and combustion completeness, i.e. how much of the vegetation biomass gets combusted during a fire. Partially, this information can be also obtained from measurements. In this study we follow closely the approach of GFED, incorporating also GFED supplemental information, to simulate fuel consumption in JSBACH. And we compare simulated by this approach fire carbon emissions with the fire emissions from GFED. Global vegetation models often use prescribed land cover maps. The simulated in the JSBACH vegetation biomass and thus the simulated fire carbon emissions critically depend on the land cover distribution. In our study we derive fire carbon emissions using two different land cover parameterizations, based on two different satellite datasets. We will present the results obtained from simulations using the JSBACH standard MODIS based vegetation distribution and compare them to the results derived using the recently released ESA CCI land cover satellite product to demonstrate the sensitivity of simulated fire carbon emissions to the underlying land cover

  13. Gyrokinetic theory of electrostatic lower-hybrid drift instabilities in a current sheet with guide field

    SciTech Connect

    Tummel, K.; Chen, L.; Wang, Z.; Wang, X. Y.; Lin, Y.

    2014-05-15

    A kinetic electrostatic eigenvalue equation for the lower-hybrid drift instability (LHDI) in a thin Harris current sheet with a guide field is derived based on the gyrokinetic electron and fully kinetic ion(GeFi) description. Three-dimensional nonlocal analyses are carried out to investigate the influence of a guide field on the stabilization of the LHDI by finite parallel wavenumber, k{sub ∥}. Detailed stability properties are first analyzed locally, and then as a nonlocal eigenvalue problem. Our results indicate that at large equilibrium drift velocities, the LHDI is further destabilized by finite k{sub ∥} in the short-wavelength domain. This is demonstrated in a local stability analysis and confirmed by the peak in the eigenfunction amplitude. We find the most unstable modes localized at the current sheet edges, and our results agree well with simulations employing the GeFi code developed by Lin et al. [Plasma Phys. Controlled Fusion 47, 657 (2005); Plasma Phys. Controlled Fusion 53, 054013 (2011)].

  14. Simulation-Based Methodologies for Global Optimization and Planning

    DTIC Science & Technology

    2013-10-11

    budget spent on accurately estimating correlations must be traded off with any potential performance gains. 2.2.2 Gradient-Enhanced Stochastic Kriging ...GESK) Stochastic kriging (SK) was introduced by Ankenman, Nelson, and Staum [1] to handle the stochastic simulation setting, where the noise in the...deterministic) kriging , the fitted curve in stochastic kriging need not go through every data point, making it closer to regression rather than, e.g., spline

  15. Cloud radiative forcing effects on observed and simulated global energetics

    NASA Technical Reports Server (NTRS)

    Sohn, Byung-Ju; Robertson, Franklin

    1993-01-01

    The research objectives are the following: (1) to examine how cloud-radiation processes generate/destroy available potential energy by altering both meridional and zonal temperature gradient; (2) to investigate how the atmospheric dynamic fields respond to the cloud-altered mass distributions through the energy conversion circuit; and (3) to examine how the improved version of CCM1 simulates observationally obtained cloud-radiative forcing and its associated energetics and circulations. Significant accomplishments in the past year towards obtaining these objectives and the focus of current research and plans for next year are discussed.

  16. Global trend analysis of surface CO simulated using the global atmospheric chemistry general circulation model, EMAC (ECHAM5/MESSy)

    NASA Astrophysics Data System (ADS)

    Yoon, Jongmin; Pozzer, Andrea; Lelieveld, Jos

    2013-04-01

    Carbon monoxide (CO) is an important trace gas in tropospheric chemistry. It directly influences the concentration of tropospheric hydroxyl radical (OH), and therefore regulates the lifetimes of various tropospheric trace gases. Since anthropogenic activity produces about 60% of the annual global emission of the tropospheric CO, temporal trend analysis of surface CO is needed to understand the increasing (decreasing) influence of humans on the cleansing capacity of the atmosphere. In this study, the global trend of surface CO from 2001 to 2010 was estimated using the EMAC (ECHAM5/MESSy for Atmospheric Chemistry) model. The simulation is based on the emission scenario based on RCP8.5 (Representative Concentration Pathways). The global EMAC simulations of monthly surface CO are evaluated with monthly MOPITT (Measurements Of Pollution In The Troposphere) observations (i.e. MOP03TM), and the spatial correlations range from 0.87 to 0.97. The simulated trends are compared with the data from a global surface CO monitoring network, the World Data Centre for Greenhouse Gases (WDCGG), which includes also the NOAA/CMDL (Climate Monitoring and Diagnostic Laboratory of the National Oceanic and Atmospheric Administration) Cooperative Air Sampling Network. Over the United States and Western Europe, the significant decreases of surface CO are estimated at -49.7±2.7 and -38.6±2.7 ppbv per decade. In contrast, the surface CO increased by +12.4±10.2 and +7.2±3.7 ppbv per decade over South America and South Africa, respectively.

  17. GLOBAL SIMULATIONS OF MAGNETOROTATIONAL INSTABILITY IN THE COLLAPSED CORE OF A MASSIVE STAR

    SciTech Connect

    Sawai, H.; Yamada, S.; Suzuki, H.

    2013-06-20

    We performed the first global numerical simulations of magnetorotational instability from a sub-magnetar-class seed magnetic field in core-collapse supernovae. As a result of axisymmetric ideal MHD simulations, we found that the magnetic field is greatly amplified to magnetar-class strength. In the saturation phase, a substantial part of the core is dominated by turbulence, and the magnetic field possesses dominant large-scale components, comparable to the size of a proto-neutron star. A pattern of coherent channel flows, which generally appears during the exponential growth phase in previous local simulations, is not observed in our global simulations. While the approximate convergence in the exponential growth rate is attained by increasing spatial resolution, that of the saturation magnetic field is not achieved due to still large numerical diffusion. Although the effect of the magnetic field on the dynamics is found to be mild, a simulation with a high enough resolution might result in a larger impact.

  18. Simulating REAL LIVES: Promoting Global Empathy and Interest in Learning through Simulation Games

    ERIC Educational Resources Information Center

    Bachen, Christine M.; Hernandez-Ramos, Pedro F.; Raphael, Chad

    2012-01-01

    In response to an increasingly interdependent world, educators are demonstrating a growing interest in educating for global citizenship. Many definitions of the "good global citizen" value empathy as an especially important disposition for understanding others across national borders and cultural divides. Yet it may be difficult for…

  19. Impacts of Wet Scavenging Parameterizations on Global Simulations of Aerosol Concentrations and Lifetimes (Invited)

    NASA Astrophysics Data System (ADS)

    Croft, B.; Martin, R.; Lohmann, U.; Pierce, J. R.

    2013-12-01

    Wet scavenging processes strongly control aerosol three-dimensional distributions. In this study, we quantify the uncertainty in global simulations of aerosol vertical profiles and lifetimes, which may be attributed to uncertainties in both convective and stratiform wet scavenging parameterizations. For convective clouds, we show that different assumptions about the wet removal of aerosols entrained above convective cloud bases can yield differences of about one order of magnitude in middle and upper tropospheric aerosol concentrations. For stratiform clouds, we demonstrate the impact of size-dependent aerosol wet scavenging as compared to the use of fixed prescribed scavenging coefficients. We quantify the difference in simulated aerosol concentrations, particularly at high latitudes, yielded by different assumptions about scavenging in mixed phase and ice clouds. We also examine the sensitivity of simulated global mean aerosol lifetimes to parameterizations for wet scavenging. Global simulations of the scavenging of aerosol-bound radionuclides following the Fukushima Dai-Ichi nuclear power plant accident are also presented. The simulated radionuclide lifetimes are compared to measurements. We present an interpretation of these constraints on global mean aerosol lifetimes. The sensitivity of simulated aerosol-bound radionuclide lifetimes to altitude and location of the radionuclide injection is also examined with consideration to the interplay of aerosol transport, mixing, and removal processes.

  20. Towards multiscale simulation of moist global flows with soundproof equations

    NASA Astrophysics Data System (ADS)

    Grabowski, Wojciech W.; Kurowski, Marcin J.; Smolarkiewicz, Piotr K.

    2013-04-01

    This presentation will discuss incorporation of phase changes of the water substance that accompany moist atmospheric flows into the all-scale atmospheric model based on soundproof equations. Specific issue concerns developing a theoretical basis and practical implementation to include pressure perturbations associated with atmospheric circulations, from small-scale to global, into representations of moist thermodynamics. In small-scale modeling using soundproof equations, pressure perturbations are obtained from the elliptic pressure solver and are typically excluded from the moist thermodynamics. For some small-scale or mesoscale extreme weather events such as a tornado or a hurricane, pressure perturbations are significant and neglecting them in the moist thermodynamics is no longer justifiable. We show through the theoretical analysis that, in larger-scale flows, at least the hydrostatic component of the pressure perturbation needs to be included because pressure variation in synoptic weather systems may affect moist thermodynamics in a way comparable to the temperature variations. As an illustration, we compare numerical solutions to the problem of moist thermal rising in a stratified environment obtained with a fully-compressible acoustic-mode-resolving model and with two versions of the anelastic model, either including or excluding small-scale pressure perturbations in moist thermodynamics. A range of initial temperature perturbations is considered. Model results show that small differences between anelastic and compressible solutions exist only for the largest initial temperature perturbation of 50~K. This paves the way to include pressure perturbations from the elliptic pressure solver in the larger-scale moist problems that will be considered in the future.

  1. Global Observing System Simulation Experiments of the Ionosphere, Thermosphere and Plasmasphere

    DTIC Science & Technology

    2013-10-30

    variability. As many of these structures as desired can be added to the background density field. 2. Traveling Ionospheric Disturbances (TIDS): IDL...GLOBAL OBSERVING SYSTEM SIMULATION EXPERIMENTS OF THE IONOSPHERE , THERMOSPHERE AND PLASMASPHERE LARS DYRUD JOHNS HOPKINS UNIVERSITY, THE 10/30/2013...21-10-2013 Final Report July 2012 - July 2013 Global OSSE of the Ionosphere , Thermosphere and Plasmasphere FA9550-12-1-0309 Gary Bust Lars Dyrud The

  2. Trends in 20th Century Global Rainfall Interception as Simulated by a Dynamic Global Vegetation Model: Implications for Global Water Resources

    NASA Astrophysics Data System (ADS)

    Murray, Steve; Prentice, Colin

    2010-05-01

    In order to monitor and forecast regions of potential freshwater stress and surplus, a comprehensive understanding and quantification of the global hydrological cycle and its components is needed. Such work should lead to better constrained estimates of freshwater fluxes and facilitate the identification of regions requiring enhanced water management. The research described here aims to quantify the contribution of climate- and CO2-induced changes in the physical properties of the land surface, mediated by biological processes. Global climate change is expected to bring about substantial latitudinal and altitudinal shifts in vegetation cover. Shifts in species distribution, the potential of increased leaf area index (LAI) but also reduced stomatal conductance in response to rising concentrations of CO2, and variability in precipitation, can all influence rates and spatial variability of the interception-throughfall balance. These effects will have implications for runoff generation and the partitioning between 'green' and 'white' water fluxes. The Land Processes eXchange Dynamic Global Vegetation Model (LPX-DGVM, a development of the LPJ model) was evaluated in terms of its interception component and used to simulate trends in global relative throughfall from 1901-2006, as this is directly relevant for runoff. We estimate that mean global annual runoff was reduced by 164 ±18 km3/year during the twentieth century as a result of biophysical changes controlling relative throughfall generation. Widespread decreases in relative throughfall of typically between 0 and -1% are evident between 1901-1953 and 1954-2006. Changes of up to

  3. Particle tracking code of simulating global RF feedback

    SciTech Connect

    Mestha, L.K.

    1991-09-01

    It is well known in the control community'' that a good feedback controller design is deeply rooted in the physics of the system. For example, when accelerating the beam we must keep several parameters under control so that the beam travels within the confined space. Important parameters include the frequency and phase of the rf signal, the dipole field, and the cavity voltage. Because errors in these parameters will progressively mislead the beam from its projected path in the tube, feedback loops are used to correct the behavior. Since the feedback loop feeds energy to the system, it changes the overall behavior of the system and may drive it to instability. Various types of controllers are used to stabilize the feedback loop. Integrating the beam physics with the feedback controllers allows us to carefully analyze the beam behavior. This will not only guarantee optimal performance but will also significantly enhance the ability of the beam control engineer to deal effectively with the interaction of various feedback loops. Motivated by this theme, we developed a simple one-particle tracking code to simulate particle behavior with feedback controllers. In order to achieve our fundamental objective, we can ask some key questions: What are the input and output parameters How can they be applied to the practical machine How can one interface the rf system dynamics such as the transfer characteristics of the rf cavities and phasing between the cavities Answers to these questions can be found by considering a simple case of a single cavity with one particle, tracking it turn-by-turn with appropriate initial conditions, then introducing constraints on crucial parameters. Critical parameters are rf frequency, phase, and amplitude once the dipole field has been given. These are arranged in the tracking code so that we can interface the feedback system controlling them.

  4. Effects of Plasma Shaping on Nonlinear Gyrokinetic Turbulence

    SciTech Connect

    E. A. Belli; Hammett, G. W.; Dorland, W.

    2008-08-01

    The effects of flux surface shape on the gyrokinetic stability and transport of tokamak plasmas are studied using the GS2 code [M. Kotschenreuther, G. Rewoldt, and W.M. Tang, Comput. Phys. Commun. 88, 128 (1995); W. Dorland, F. Jenko, M. Kotschenreuther, and B.N. Rogers, Phys. Rev. Lett. 85, 5579 (2000)]. Studies of the scaling of nonlinear turbulence with shaping parameters are performed using analytic equilibria based on interpolations of representative shapes of the Joint European Torus (JET) [P.H. Rebut and B.E. Keen, Fusion Technol. 11, 13 (1987)]. High shaping is found to be a stabilizing influence on both the linear ion-temperature-gradient (ITG) instability and the nonlinear ITG turbulence. For the parameter regime studied here, a scaling of the heat flux with elongation of χ ~ κ-1.5 or κ-2.0, depending on the triangularity, is observed at fixed average temperature gradient. While this is not as strong as empirical elongation scalings, it is also found that high shaping results in a larger Dimits upshift of the nonlinear critical temperature gradient due to an enhancement of the Rosenbluth-Hinton residual zonal flows.

  5. An Efficient Method for Verifying Gyrokinetic Microstability Codes

    NASA Astrophysics Data System (ADS)

    Bravenec, R.; Candy, J.; Dorland, W.; Holland, C.

    2009-11-01

    Benchmarks for gyrokinetic microstability codes can be developed through successful ``apples-to-apples'' comparisons among them. Unlike previous efforts, we perform the comparisons for actual discharges, rendering the verification efforts relevant to existing experiments and future devices (ITER). The process requires i) assembling the experimental analyses at multiple times, radii, discharges, and devices, ii) creating the input files ensuring that the input parameters are faithfully translated code-to-code, iii) running the codes, and iv) comparing the results, all in an organized fashion. The purpose of this work is to automate this process as much as possible: At present, a python routine is used to generate and organize GYRO input files from TRANSP or ONETWO analyses. Another routine translates the GYRO input files into GS2 input files. (Translation software for other codes has not yet been written.) Other python codes submit the multiple GYRO and GS2 jobs, organize the results, and collect them into a table suitable for plotting. (These separate python routines could easily be consolidated.) An example of the process -- a linear comparison between GYRO and GS2 for a DIII-D discharge at multiple radii -- will be presented.

  6. The rotation effect on tokamak stability in the gyrokinetic description

    NASA Astrophysics Data System (ADS)

    Zheng, L.-J.; Tessarotto, M.

    1996-11-01

    The combined eigenvalue and initial value problems for both ion temperature gradient (ITG) and ballooning modes are solved analytically, with full gyrokinetic and toroidal effects taken into account. The results show that the sonic rotation can be harmful for both ITG and ballooning stabilities, while subsonic rotation plays always a stabilizing role. The flow shear damping on the ballooning modes is found to be much weaker than that on the ITG ones. This suggests that the ballooning instabilities are more likely to develop than the ITG modes in the rotating plasmas. The existence of the flow shear leads the time evolution of the fluctuation signals to become the type containing two timescales --- fast oscillating (with either fast or slow growing) signals with their amplitudes modulated by the slow oscillating and damping envelops, looking as if fish-bone like fluctuations. The comparison with the experimental observations are also discussed, in addressing the issues that which type of modes: the electrostatic drift or the MHD ones is likely to be responsible for the anomalous transport in tokamaks, and how to suppress them based on the current analyses.

  7. A multi-species collisional operator for full-F gyrokinetics

    SciTech Connect

    Estève, D.; Garbet, X.; Sarazin, Y.; Grandgirard, V.; Cartier-Michaud, T.; Dif-Pradalier, G.; Ghendrih, P.; Latu, G.; Norscini, C.

    2015-12-15

    A linearized multi-species collision operator has been developed for an efficient implementation in gyrokinetic codes. This operator satisfies the main expected properties: particle, momentum, and energy conservation, and existence of an H-theorem. A gyrokinetic version is then calculated, which involves derivatives with respect to the gyrocenter position, parallel velocity, and magnetic momentum. An isotropic version in the velocity space can be constructed for the specific problem of trace impurities colliding with a main species. A simpler version that involves derivatives with parallel velocity only has been developed. This reduced version has been implemented in the GYSELA gyrokinetic code, and is shown to comply with particle, momentum, and energy conservation laws. Moreover, the interspecies relaxation rates for momentum and energy agree very well with the theoretical values.

  8. Ionospheric Simulation System for Satellite Observations and Global Assimilative Modeling Experiments (ISOGAME)

    NASA Technical Reports Server (NTRS)

    Pi, Xiaoqing; Mannucci, Anthony J.; Verkhoglyadova, Olga P.; Stephens, Philip; Wilson, Brian D.; Akopian, Vardan; Komjathy, Attila; Lijima, Byron A.

    2013-01-01

    ISOGAME is designed and developed to assess quantitatively the impact of new observation systems on the capability of imaging and modeling the ionosphere. With ISOGAME, one can perform observation system simulation experiments (OSSEs). A typical OSSE using ISOGAME would involve: (1) simulating various ionospheric conditions on global scales; (2) simulating ionospheric measurements made from a constellation of low-Earth-orbiters (LEOs), particularly Global Navigation Satellite System (GNSS) radio occultation data, and from ground-based global GNSS networks; (3) conducting ionospheric data assimilation experiments with the Global Assimilative Ionospheric Model (GAIM); and (4) analyzing modeling results with visualization tools. ISOGAME can provide quantitative assessment of the accuracy of assimilative modeling with the interested observation system. Other observation systems besides those based on GNSS are also possible to analyze. The system is composed of a suite of software that combines the GAIM, including a 4D first-principles ionospheric model and data assimilation modules, an Internal Reference Ionosphere (IRI) model that has been developed by international ionospheric research communities, observation simulator, visualization software, and orbit design, simulation, and optimization software. The core GAIM model used in ISOGAME is based on the GAIM++ code (written in C++) that includes a new high-fidelity geomagnetic field representation (multi-dipole). New visualization tools and analysis algorithms for the OSSEs are now part of ISOGAME.

  9. Atomic oxygen distributions in the Venus thermosphere: Comparisons between Venus Express observations and global model simulations

    NASA Astrophysics Data System (ADS)

    Brecht, A. S.; Bougher, S. W.; Gérard, J.-C.; Soret, L.

    2012-02-01

    Nightglow emissions provide insight into the global thermospheric circulation, specifically in the transition region (˜70-120 km). The O 2 IR nightglow statistical map created from Venus Express (VEx) Visible and InfraRed Thermal Imaging Spectrometer (VIRTIS) observations has been used to deduce a three-dimensional atomic oxygen density map. In this study, the National Center of Atmospheric Research (NCAR) Venus Thermospheric General Circulation Model (VTGCM) is utilized to provide a self-consistent global view of the atomic oxygen density distribution. More specifically, the VTGCM reproduces a 2D nightside atomic oxygen density map and vertical profiles across the nightside, which are compared to the VEx atomic oxygen density map. Both the simulated map and vertical profiles are in close agreement with VEx observations within a ˜30° contour of the anti-solar point. The quality of agreement decreases past ˜30°. This discrepancy implies the employment of Rayleigh friction within the VTGCM may be an over-simplification for representing wave drag effects on the local time variation of global winds. Nevertheless, the simulated atomic oxygen vertical profiles are comparable with the VEx profiles above 90 km, which is consistent with similar O 2 ( 1Δ) IR nightglow intensities. The VTGCM simulations demonstrate the importance of low altitude trace species as a loss for atomic oxygen below 95 km. The agreement between simulations and observations provides confidence in the validity of the simulated mean global thermospheric circulation pattern in the lower thermosphere.

  10. MJO simulation in a cloud-system-resolving global ocean-atmosphere coupled model

    NASA Astrophysics Data System (ADS)

    Sasaki, Wataru; Onishi, Ryo; Fuchigami, Hiromitsu; Goto, Koji; Nishikawa, Shiro; Ishikawa, Yoichi; Takahashi, Keiko

    2016-09-01

    An observed Madden-Julian Oscillation (MJO) propagating from the central Indian Ocean to the western Pacific from 15 December 2006 to 10 January 2007 was successfully simulated by a cloud-system-resolving global ocean-atmosphere coupled model without parameterization of cumulus convection. We found that the ocean coupling has significant impacts on the MJO simulation, e.g., strength of the moisture convergence, and the timing and strength of the westerly wind burst over the Maritime Continent. The model also generally well simulated the decay of the MJO in the western Pacific, as well as the changes in sea surface temperature. These results demonstrate that the cloud-system-resolving global ocean-atmosphere coupled model can be used for realistic MJO simulation.

  11. A calibration procedure to improve global rice yield simulations with EPIC

    SciTech Connect

    Xiong, Wei; Balkovic, Juraj; van der Velde, M.; Zhang, Xuesong; Izaurralde, Roberto C.; Skalsky, Rastislav; Lin, Erda; Mueller, Nathan; Obersteiner, Michael

    2014-02-01

    Crop models are increasingly used to assess impacts of climate change/variability and management practices on productivity and environmental performance of alternative cropping systems. Calibration is an important procedure to improve reliability of model simulations, especially for large area applications. However, global-scale crop model calibration has rarely been exercised due to limited data availability and expensive computing cost. Here we present a simple approach to calibrate Environmental Policy Integrated Climate (EPIC) model for a global implementation of rice. We identify four parameters (potential heat unit – PHU, planting density – PD, harvest index – HI, and biomass energy ratio – BER) and calibrate them regionally to capture the spatial pattern of reported rice yield in 2000. Model performance is assessed by comparing simulated outputs with independent FAO national data. The comparison demonstrates that the global calibration scheme performs satisfactorily in reproducing the spatial pattern of rice yield, particularly in main rice production areas. Spatial agreement increases substantially when more parameters are selected and calibrated, but with varying efficiencies. Among the parameters, PHU and HI exhibit the highest efficiencies in increasing the spatial agreement. Simulations with different calibration strategies generate a pronounced discrepancy of 5–35% in mean yields across latitude bands, and a small to moderate difference in estimated yield variability and yield changing trend for the period of 1981–2000. Present calibration has little effects in improving simulated yield variability and trends at both regional and global levels, suggesting further works are needed to reproduce temporal variability of reported yields. This study highlights the importance of crop models’ calibration, and presents the possibility of a transparent and consistent up scaling approach for global crop simulations given current availability of

  12. Quadratic free energy for the linearized gyrokinetic Vlasov-Maxwell equations

    NASA Astrophysics Data System (ADS)

    Brizard, Alain

    1994-08-01

    The motivation for the present work resides in the search for a new formalism for investigating the stability of plasma equilibria perturbed by low-frequency electromagnetic field fluctuations. In this context, the free-energy method of Morrison and Pfirsch [Phys. Fluids B 2, 1105 (1990)] has been extended by deriving an expression for the gyrokinetic free energy. As a check on the gyrokinetic free-energy method, known formulas previously obtained in the electrostatic limit are recovered, while recent (drift-kinetic) formulas obtained by Betti and Freidberg [Phys. Fluids B 4, 1465 (1992)] in the electromagnetic limit are generalized.

  13. Revisiting Aerosol Effects in Global Climate Models Using an Aerosol Lidar Simulator

    NASA Astrophysics Data System (ADS)

    Ma, P. L.; Chepfer, H.; Winker, D. M.; Ghan, S.; Rasch, P. J.

    2015-12-01

    Aerosol effects are considered a major source of uncertainty in global climate models and the direct and indirect radiative forcings have strong model dependency. These forcings are routinely evaluated (and calibrated) against observations, among them satellite retrievals are greatly used for their near-global coverage. However, the forcings calculated from model output are not directly comparable with those computed from satellite retrievals since sampling and algorithmic differences (such as cloud screening, noise reduction, and retrieval) between models and observations are not accounted for. It is our hypothesis that the conventional model validation procedures for comparing satellite observations and model simulations can mislead model development and introduce biases. Hence, we have developed an aerosol lidar simulator for global climate models that simulates the CALIOP lidar signal at 532nm. The simulator uses the same algorithms as those used to produce the "GCM-oriented CALIPSO Aerosol Product" to (1) objectively sample lidar signal profiles; and (2) derive aerosol fields (e.g., extinction profile, aerosol type, etc) from lidar signals. This allows us to sample and derive aerosol fields in the model and real atmosphere in identical ways. Using the Department of Energy's ACME model simulations, we found that the simulator-retrieved aerosol distribution and aerosol-cloud interactions are significantly different from those computed from conventional approaches, and that the model is much closer to satellite estimates than previously believed.

  14. A Global System for Transportation Simulation and Visualization in Emergency Evacuation Scenarios

    SciTech Connect

    Lu, Wei; Liu, Cheng; Thomas, Neil; Bhaduri, Budhendra L; Han, Lee

    2015-01-01

    Simulation-based studies are frequently used for evacuation planning and decision making processes. Given the transportation systems complexity and data availability, most evacuation simulation models focus on certain geographic areas. With routine improvement of OpenStreetMap road networks and LandScanTM global population distribution data, we present WWEE, a uniform system for world-wide emergency evacuation simulations. WWEE uses unified data structure for simulation inputs. It also integrates a super-node trip distribution model as the default simulation parameter to improve the system computational performance. Two levels of visualization tools are implemented for evacuation performance analysis, including link-based macroscopic visualization and vehicle-based microscopic visualization. For left-hand and right-hand traffic patterns in different countries, the authors propose a mirror technique to experiment with both scenarios without significantly changing traffic simulation models. Ten cities in US, Europe, Middle East, and Asia are modeled for demonstration. With default traffic simulation models for fast and easy-to-use evacuation estimation and visualization, WWEE also retains the capability of interactive operation for users to adopt customized traffic simulation models. For the first time, WWEE provides a unified platform for global evacuation researchers to estimate and visualize their strategies performance of transportation systems under evacuation scenarios.

  15. Simulation of atmospheric carbon dioxide variability with a global coupled Eulerian-Lagrangian transport model

    NASA Astrophysics Data System (ADS)

    Koyama, Y.; Maksyutov, S.; Mukai, H.; Thoning, K.; Tans, P.

    2010-11-01

    This study assesses the advantages of using a coupled atmospheric-tracer transport model, comprising a global Eulerian model and a global Lagrangian particle dispersion model, for reproducibility of tracer gas variation affected by near field around observation sites. The ability to resolve variability in atmospheric composition on an hourly time scale and a spatial scale of several kilometers would be beneficial for analyzing data from continuous ground-based monitoring and upcoming space-based observations. The coupled model yields increased horizontal resolution of transport and fluxes, and has been tested in regional-scale studies of atmospheric chemistry. By applying the Lagrangian component to the global domain, we extend this approach to the global scale, thereby enabling global inverse modeling and data assimilation. To validate the coupled model, we compare model-simulated CO2 concentrations with continuous observations at two sites operated by the National Oceanic and Atmospheric Administration, USA and one site operated by National Institute for Environmental Studies, Japan. As the purpose of this study is limited to demonstration of the new modeling approach, we select a small subset of 3 sites to highlight use of the model in various geographical areas. To explore the capability of the coupled model in simulating synoptic-scale meteorological phenomena, we calculate the correlation coefficients and variance ratios between deseasonalized model-simulated and observed CO2 concentrations. Compared with the Eulerian model alone, the coupled model yields improved agreement between modeled and observed CO2 concentrations.

  16. "we cannot Wait to ACT!" Simulating Global Climate Summits with Gifted and Talented Students

    NASA Astrophysics Data System (ADS)

    Haste, T.; Vesperman, D.; Alrivy, S.

    2012-12-01

    Students simulated the 2011 Durban Climate Summit in order to experience two roles: global diplomats attempting to solve a significant global problem and scientists as contributors of knowledge. Together, they worked to develop a framework to provide global solutions as world leaders. This project demonstrated [highlighted?] student work from the climate summit, describing how students promoted dialogue and provided climate science information to their diplomatic peers, who then used this information in diplomatic negotiations. By focusing on increasing student climate literacy, students engaged in both climate science and global diplomacy through meaningful simulations to understand the global and political issues surrounding Climate Change mitigation. Three classes of international middle school students attending Johns Hopkins Center for Talented Youth summer programs enacted the 2011 Durban Model United Nations meeting. One class developed a deep understanding of climate and climate science by working with computer models and data to represent members of the IPCC. Members of this class collaborated with climate scientists, conducted experiments, and developed a well-rounded understanding of paleoclimate, current climatic trends, carbon cycling, and modeling future outcomes. Two additional classes took on the roles of UN diplomats, researched their respective nations, engaged in practice UN simulations, and developed a working understanding of the diplomatic process. Students representing the IPCC assisted their diplomatic peers in developing and proposing possible UN resolutions. All three classes worked together to enact the Durban Climate Summit with the underlying focus of developing diplomatic Climate Change mitigation strategies and ultimately resolutions for member nations.

  17. Global Simulation of Bioenergy Crop Productivity: Analytical Framework and Case Study for Switchgrass

    SciTech Connect

    Kang, Shujiang; Kline, Keith L; Nair, S. Surendran; Nichols, Dr Jeff A; Post, Wilfred M; Brandt, Craig C; Wullschleger, Stan D; Wei, Yaxing; Singh, Nagendra

    2013-01-01

    A global energy crop productivity model that provides geospatially explicit quantitative details on biomass potential and factors affecting sustainability would be useful, but does not exist now. This study describes a modeling platform capable of meeting many challenges associated with global-scale agro-ecosystem modeling. We designed an analytical framework for bioenergy crops consisting of six major components: (i) standardized natural resources datasets, (ii) global field-trial data and crop management practices, (iii) simulation units and management scenarios, (iv) model calibration and validation, (v) high-performance computing (HPC) simulation, and (vi) simulation output processing and analysis. The HPC-Environmental Policy Integrated Climate (HPC-EPIC) model simulated a perennial bioenergy crop, switchgrass (Panicum virgatum L.), estimating feedstock production potentials and effects across the globe. This modeling platform can assess soil C sequestration, net greenhouse gas (GHG) emissions, nonpoint source pollution (e.g., nutrient and pesticide loss), and energy exchange with the atmosphere. It can be expanded to include additional bioenergy crops (e.g., miscanthus, energy cane, and agave) and food crops under different management scenarios. The platform and switchgrass field-trial dataset are available to support global analysis of biomass feedstock production potential and corresponding metrics of sustainability.

  18. Living in a Global Age. A Simulation Activity for Upper Elementary and Secondary Level Students.

    ERIC Educational Resources Information Center

    Stanford Univ., CA. Stanford Program on International and Cross Cultural Education.

    Designed to introduce concepts in international trade and global economics to upper elementary and secondary level students, this simulation activity engages students in the group task of assembling flashlights. A variety of topics can be explored, such as energy shortages, international crises, relationships between rich and poor nations, foreign…

  19. A Globalization Simulation to Teach Corporate Social Responsibility: Design Features and Analysis of Student Reasoning

    ERIC Educational Resources Information Center

    Bos, Nathan D.; Shami, N. Sadat; Naab, Sara

    2006-01-01

    There is an increasing need for business students to be taught the ability to think through ethical dilemmas faced by corporations conducting business on a global scale. This article describes a multiplayer online simulation game, ISLAND TELECOM, that exposes students to ethical dilemmas in international business. Through role playing and…

  20. Investigation of High-Latitude Phenomena Using Polar Data and Global Simulations

    NASA Technical Reports Server (NTRS)

    Russell, Christopher T.; Hoffman, Robert (Technical Monitor)

    2001-01-01

    The goal of this one-year project was to use data from the Polar satellite in conjunction with global simulations of Earth's magnetosphere to investigate phenomena in the high-latitude magnetosphere. Specifically, we addressed reconnection at the cusp during periods of northward interplanetary magnetic field (IMF), and the effects of substorms on the high-latitude magnetosphere.

  1. Structural uncertainty in model-simulated trends of global gross primary production

    NASA Astrophysics Data System (ADS)

    Hashimoto, H.; Wang, W.; Milesi, C.; Xiong, J.; Ganguly, S.; Zhu, Z.; Nemani, R. R.

    2012-12-01

    Accurate representation of the effect of drought on terrestrial vegetation functioning is important for understanding the interannual variability in global Gross Primary Production(GPP) and for projecting carbon sequestration potential by vegetation. Drought effect is usually modeled as a function of Vapor Pressure Deficit (VPD) and/or soil moisture. Global warming is likely to accelerate increasing trend in VPD, while a relatively stable precipitation is predicted. This difference in projections between VPD and precipitation can cause serious discrepancies in vegetation behavior depending on how the ecosystem models represent the drought effect. In this study, we scrutinized the model responses to drought using the 30-year record of GIMMS 3G dataset (1982-2010). A diagnostic ecosystem model, Terrestrial Observation and Prediction System (TOPS), was used to estimate global GPP from 1982 to 2009 with 9 different experimental simulations. The control run of global GPP increased until around 2000, but stayed flat after 2000. Among the simulations with single climate constraint, only the VPD-driven simulation showed a decrease in 2000s, while the other scenarios simulated an increase in GPP. These different responses in 2000s can be attributed to the difference in the representation of water stress in models, i.e. using VPD and/or precipitation. When we compared the trend of simulated GPP with CO2 growth rate, VPD-driven model had the highest correlation with CO2 growth rate. However, spatial map of trend in simulated GPP using GIMMS 3G data showed more consistent with the GPP driven by soil moisture than the GPP driven by VPD. Thus, the GPP driven by soil moisture is close to satellite observations in TOPS model, and high correlation of VPD-driven simulation with CO2 growth rate can be attributed to spurious correlation that is likely induced by the previously reported high correlations between CO2 growth rate and temperature variability.

  2. On numerical simulation of the global distribution of sulfate aerosol produced by a large volcanic eruption

    SciTech Connect

    Pudykiewicz, J.A.; Dastoor, A.P.

    1994-12-31

    Volcanic eruptions play an important role in the global sulfur cycle of the Earth`s atmosphere and can significantly perturb the global atmospheric chemistry. The large amount of sulfate aerosol produced by the oxidation of SO{sub 2} injected into the atmosphere during volcanic eruptions also has a relatively big influence on the radiative equilibrium of the Earth`s climatic system. The submicron particles of the sulfate aerosol reflect solar radiation more effectively than they trap radiation in the infrared range. The effect of this is observed as cooling of the Earth`s surface. The modification of the global radiation budget following volcanic eruption can subsequently cause significant fluctuations of atmospheric variables on a subclimatic scale. The resulting perturbation of weather patterns has been observed and well documented since the eruptions of Mt. Krakatau and Mt. Tambora. The impact of the sulfate aerosol from volcanic eruptions on the radiative equilibrium of the Earth`s atmosphere was also confirmed by the studies done with Global Circulation Models designed to simulate climate. The objective of the present paper is to present a simple and effective method to estimate the global distribution of the sulfate aerosol produced as a consequence of volcanic eruptions. In this study we will present results of the simulation of global distribution of sulfate aerosol from the eruption of Mt Pinatubo.

  3. Changes on Mid-Latitude Cyclones due to Global Warming Simulated by a Global 20-km-mesh Atmospheric Model

    NASA Astrophysics Data System (ADS)

    Miyamoto, K.

    2005-12-01

    I investigate how the intensity and the activity of mid-latitude cyclones change as a result of global warming, based on a time-slice experiment with a super-high resolution Atmospheric General Circulation Model (20-km mesh TL959L60 MRI/JMA AGCM). The model was developed by the RR2002 project "Development of Super High Resolution Global and Regional Climate Models" funded by the Japanese Ministry of Education, Culture, Sports, Science and Technology. In this context, I use a 10-year control simulation with the climatological SST and a 10-year time-slice global warming simulation using the SST anomalies derived from the SRES A1B scenario run with the MRI-CGCM2.3 (T42L30 atmosphere, 0.5-2.0 x 2.5 L23 ocean) corresponding to the end of the 21st century. I have analyzed the sea-level pressure field and the kinetic energy field of the wind at the 500 hPa pressure level associated with mid-latitude transients from October through April. According to a comparison of 10-day average fields between present and future in the North Pacific, some statistically significant changes are found in a warmer climate for the both of sea-level pressure and the kinetic energy fields. In particular, from late winter through early spring, the sea-level pressure decreases on many parts of the whole Pacific. The kinetic energy of the wind becomes higher on center of the basin. Therefore, I suppose the Aleutian Low is likely to settle in longer by about one month than the present. Hereafter, I plan to investigate what kind of phenomena may accompany the changes on mid-latitude transients.

  4. Applications of TRMM-based Multi-Satellite Precipitation Estimation for Global Runoff Simulation: Prototyping a Global Flood Monitoring System

    NASA Technical Reports Server (NTRS)

    Hong, Yang; Adler, Robert F.; Huffman, George J.; Pierce, Harold

    2008-01-01

    Advances in flood monitoring/forecasting have been constrained by the difficulty in estimating rainfall continuously over space (catchment-, national-, continental-, or even global-scale areas) and flood-relevant time scale. With the recent availability of satellite rainfall estimates at fine time and space resolution, this paper describes a prototype research framework for global flood monitoring by combining real-time satellite observations with a database of global terrestrial characteristics through a hydrologically relevant modeling scheme. Four major components included in the framework are (1) real-time precipitation input from NASA TRMM-based Multi-satellite Precipitation Analysis (TMPA); (2) a central geospatial database to preprocess the land surface characteristics: water divides, slopes, soils, land use, flow directions, flow accumulation, drainage network etc.; (3) a modified distributed hydrological model to convert rainfall to runoff and route the flow through the stream network in order to predict the timing and severity of the flood wave, and (4) an open-access web interface to quickly disseminate flood alerts for potential decision-making. Retrospective simulations for 1998-2006 demonstrate that the Global Flood Monitor (GFM) system performs consistently at both station and catchment levels. The GFM website (experimental version) has been running at near real-time in an effort to offer a cost-effective solution to the ultimate challenge of building natural disaster early warning systems for the data-sparse regions of the world. The interactive GFM website shows close-up maps of the flood risks overlaid on topography/population or integrated with the Google-Earth visualization tool. One additional capability, which extends forecast lead-time by assimilating QPF into the GFM, also will be implemented in the future.

  5. Dayside Proton Aurora: Comparisons between Global MHD Simulations and Image Observations

    NASA Technical Reports Server (NTRS)

    Berchem, J.; Fuselier, S. A.; Petrinec, S.; Frey, H. U.; Burch, J. L.

    2003-01-01

    The IMAGE mission provides a unique opportunity to evaluate the accuracy of current global models of the solar wind interaction with the Earth's magnetosphere. In particular, images of proton auroras from the Far Ultraviolet Instrument (FUV) onboard the IMAGE spacecraft are well suited to support investigations of the response of the Earth's magnetosphere to interplanetary disturbances. Accordingly, we have modeled two events that occurred on June 8 and July 28, 2000, using plasma and magnetic field parameters measured upstream of the bow shock as input to three-dimensional magnetohydrodynamic (MHD) simulations. This paper begins with a discussion of images of proton auroras from the FUV SI-12 instrument in comparison with the simulation results. The comparison showed a very good agreement between intensifications in the auroral emissions measured by FUV SI-12 and the enhancement of plasma flows into the dayside ionosphere predicted by the global simulations. Subsequently, the IMAGE observations are analyzed in the context of the dayside magnetosphere's topological changes in magnetic field and plasma flows inferred from the simulation results. Finding include that the global dynamics of the auroral proton precipitation patterns observed by IMAGE are consistent with magnetic field reconnection occurring as a continuous process while the iMF changes in direction and the solar wind dynamic pressure varies. The global simulations also indicate that some of the transient patterns observed by IMAGE are consistent with sporadic reconnection processes. Global merging patterns found in the simulations agree with the antiparallel merging model. though locally component merging might broaden the merging region, especially in the region where shocked solar wind discontinuities first reach the magnetopause. Finally, the simulations predict the accretion of plasma near the bow shock in the regions threaded by newly open field lines on which plasma flows into the dayside

  6. Evaluation of Global Observations-Based Evapotranspiration Datasets and IPCC AR4 Simulations

    NASA Technical Reports Server (NTRS)

    Mueller, B.; Seneviratne, S. I.; Jimenez, C.; Corti, T.; Hirschi, M.; Balsamo, G.; Ciais, P.; Dirmeyer, P.; Fisher, J. B.; Guo, Z.; Jung, M.; Maignan, F.; McCabe, M. F.; Reichle, R.; Reichstein, M.; Rodell, M.; Sheffield, J.; Teuling, A. J.; Wang, K.; Wood, E. F.; Zhang, Y.

    2011-01-01

    Quantification of global land evapotranspiration (ET) has long been associated with large uncertainties due to the lack of reference observations. Several recently developed products now provide the capacity to estimate ET at global scales. These products, partly based on observational data, include satellite ]based products, land surface model (LSM) simulations, atmospheric reanalysis output, estimates based on empirical upscaling of eddycovariance flux measurements, and atmospheric water balance datasets. The LandFlux-EVAL project aims to evaluate and compare these newly developed datasets. Additionally, an evaluation of IPCC AR4 global climate model (GCM) simulations is presented, providing an assessment of their capacity to reproduce flux behavior relative to the observations ]based products. Though differently constrained with observations, the analyzed reference datasets display similar large-scale ET patterns. ET from the IPCC AR4 simulations was significantly smaller than that from the other products for India (up to 1 mm/d) and parts of eastern South America, and larger in the western USA, Australia and China. The inter-product variance is lower across the IPCC AR4 simulations than across the reference datasets in several regions, which indicates that uncertainties may be underestimated in the IPCC AR4 models due to shared biases of these simulations.

  7. Global simulations of smoke from Kuwaiti oil fires and possible effects on climate

    SciTech Connect

    Glatzmaier, G.A.; Malone, R.C.; Kao, C.Y.J.

    1991-01-01

    The Los Alamos Global Climate Model has bee used to simulate the global evolution of the Kuwaiti oil fire smoke and its potential effects on the climate. The initial simulations were done shortly before the fires were lit in January 1991. They indicated that such an event would not result in a Mini Nuclear Winter'' as some people were suggesting. Further simulations during the year suggested that the smoke could be responsible for subtle regional climate changes in the spring such as a 5 degree centigrade decrease in the surface temperature in Kuwait, a 10% decrease in precipitation in Saudi Arabia and a 10% increase in precipitation in the Tibetan Plateau region. These results are in qualitative agreement with the observations this year.

  8. Global simulations of smoke from Kuwaiti oil fires and possible effects on climate

    SciTech Connect

    Glatzmaier, G.A.; Malone, R.C.; Kao, C.Y.J.

    1991-12-31

    The Los Alamos Global Climate Model has bee used to simulate the global evolution of the Kuwaiti oil fire smoke and its potential effects on the climate. The initial simulations were done shortly before the fires were lit in January 1991. They indicated that such an event would not result in a ``Mini Nuclear Winter`` as some people were suggesting. Further simulations during the year suggested that the smoke could be responsible for subtle regional climate changes in the spring such as a 5 degree centigrade decrease in the surface temperature in Kuwait, a 10% decrease in precipitation in Saudi Arabia and a 10% increase in precipitation in the Tibetan Plateau region. These results are in qualitative agreement with the observations this year.

  9. Properties of convection in the tropics within high-resolution global GEOS-5 simulations

    NASA Astrophysics Data System (ADS)

    Putman, W. M.; Suarez, M.; Reale, O.

    2011-12-01

    The NASA Global Modeling and Assimilation Office (GMAO) has developed a global non-hydrostatic cloud-system resolving capability within the NASA Goddard Earth Observing System global atmospheric model version 5 (GEOS-5) [Putman and Suarez, 2011]. Using a non-hydrostatic finite-volume dynamical core coupled with advances in the moist physics and convective parameterization the model has been used to perform cloud-system resolving experiments at resolutions as fine as 3.5- to 14-km globally. This effort follows the recommendations from the World Modeling Summit for Climate Prediction [Shukla et al, 2009] that the pursuit of global ultra-high resolution climate models should be developed to evaluate global climate change at regional scales. Two-year free running simulations with GEOS-5 at 14- and 10-km globally forced by observed sea surface temperatures and climatological aerosol emissions, know as Nature Runs (NRs), demonstrate the ability of GEOS-5 to predict realistic seasonal variability of tropical cyclone activity in terms of frequency and track location. These NRs provide a satisfactory representation of the motion of the tropical atmosphere on scales ranging from easterly wave propagation to seasonal means. The innovative aspect of these simulations is the capability of representing detailed features of tropical cyclone structure, which are generally seen only in mesoscale regional models. In particular, the scale of the eye and rainbands, the vertical profile of vorticity and divergence, the strength of the thermal warm core, and the intensity of the upper-level outflow, are all realistically represented. These NRs are valuable simulations in assessing the nature of multi-scale tropical convective clusters and their organization within the tropical circulation. Using model derived brightness temperatures and composite global observations the characteristics of these clusters are evaluated with respect to size, temperature and global distribution. The role of

  10. Tropical Cyclone Activity in Regional and Grid-Refined Global Simulations

    NASA Astrophysics Data System (ADS)

    Hashimoto, A.

    2014-12-01

    Most electric power and transmission facilities in Japan operate for half a century or more, so it is important to ensure against general fatigue and damage from extreme weather and climate events. There is therefore a critical demand for useful assessments of the present weather and accurate predictions of future weather and climate. Tropical Cyclones (TCs) are among the most destructive weather phenomenon to the industry. This study compares simulated TC activity in regional climate simulations using the Weather Research and Forecasting (WRF) model and global climate simulations using the Model for Prediction Across Scales (MPAS) specifically to identify the benefits of global variable resolution simulation. Horizontal refinement to approximately 20km grid spacing over the Northwest Pacific is achieved through nesting for WRF and MPAS uses a variable resolution mesh. The ability of these two simulation approaches to capture TC activity is examined in single-year continuous simulations from May 2005 to April 2006. Compared to surface station and satellite derived rainfall datasets, tropical precipitation patterns are reproduced reasonably well by both models, but the annual precipitation totals are overestimated. Similarly, using an automated TC identification and tracking algorithm, results show that both models reproduce well TC genesis regions, tracks, wind-pressure relationships, and intensification rate, but TC frequencies are overestimated by both models. These results indicate that global variable resolution simulation is a suitable tool to study regional climate and TC activity. Future work will use MPAS to simulate longer periods of current and future climate to provide a unique view of the future change TC activity over Japan, tailored to the needs of the electric power industry.

  11. A global simulation of brown carbon: implications for photochemistry and direct radiative effect

    NASA Astrophysics Data System (ADS)

    Jo, Duseong S.; Park, Rokjin J.; Lee, Seungun; Kim, Sang-Woo; Zhang, Xiaolu

    2016-03-01

    Recent observations suggest that a certain fraction of organic carbon (OC) aerosol effectively absorbs solar radiation, which is also known as brown carbon (BrC) aerosol. Despite much observational evidence of its presence, very few global modelling studies have been conducted because of poor understanding of global BrC emissions. Here we present an explicit global simulation of BrC in a global 3-D chemical transport model (GEOS-Chem), including global BrC emission estimates from primary (3.9 ± 1.7 and 3.0 ± 1.3 TgC yr-1 from biomass burning and biofuel) and secondary (5.7 TgC yr-1 from aromatic oxidation) sources. We evaluate the model by comparing the results with observed absorption by water-soluble OC in surface air in the United States, and with single scattering albedo observations at Aerosol Robotic Network (AERONET) sites all over the globe. The model successfully reproduces the seasonal variations of observed light absorption by water-soluble OC, but underestimates the magnitudes, especially in regions with high secondary source contributions. Our global simulations show that BrC accounts for 21 % of the global mean surface OC concentration, which is typically assumed to be scattering. We find that the global direct radiative effect of BrC is nearly zero at the top of the atmosphere, and consequently decreases the direct radiative cooling effect of OC by 16 %. In addition, the BrC absorption leads to a general reduction of NO2 photolysis rates, whose maximum decreases occur in Asia up to -8 % (-17 %) on an annual (spring) mean basis. The resulting decreases of annual (spring) mean surface ozone concentrations are up to -6 % (-13 %) in Asia, indicating a non-negligible effect of BrC on photochemistry in this region.

  12. High resolution simulations of aerosol microphysics in a global and regionally nested chemical transport model

    NASA Astrophysics Data System (ADS)

    Adams, P. J.; Marks, M.

    2015-12-01

    The aerosol indirect effect is the largest source of forcing uncertainty in current climate models. This effect arises from the influence of aerosols on the reflective properties and lifetimes of clouds, and its magnitude depends on how many particles can serve as cloud droplet formation sites. Assessing levels of this subset of particles (cloud condensation nuclei, or CCN) requires knowledge of aerosol levels and their global distribution, size distributions, and composition. A key tool necessary to advance our understanding of CCN is the use of global aerosol microphysical models, which simulate the processes that control aerosol size distributions: nucleation, condensation/evaporation, and coagulation. Previous studies have found important differences in CO (Chen, D. et al., 2009) and ozone (Jang, J., 1995) modeled at different spatial resolutions, and it is reasonable to believe that short-lived, spatially-variable aerosol species will be similarly - or more - susceptible to model resolution effects. The goal of this study is to determine how CCN levels and spatial distributions change as simulations are run at higher spatial resolution - specifically, to evaluate how sensitive the model is to grid size, and how this affects comparisons against observations. Higher resolution simulations are necessary supports for model/measurement synergy. Simulations were performed using the global chemical transport model GEOS-Chem (v9-02). The years 2008 and 2009 were simulated at 4ox5o and 2ox2.5o globally and at 0.5ox0.667o over Europe and North America. Results were evaluated against surface-based particle size distribution measurements from the European Supersites for Atmospheric Aerosol Research project. The fine-resolution model simulates more spatial and temporal variability in ultrafine levels, and better resolves topography. Results suggest that the coarse model predicts systematically lower ultrafine levels than does the fine-resolution model. Significant

  13. A First Approach to Global Runoff Simulation using Satellite Rainfall Estimation

    NASA Technical Reports Server (NTRS)

    Hong, Yang; Adler, Robert F.; Hossain, Faisal; Curtis, Scott; Huffman, George J.

    2007-01-01

    Many hydrological models have been introduced in the hydrological literature to predict runoff but few of these have become common planning or decision-making tools, either because the data requirements are substantial or because the modeling processes are too complicated for operational application. On the other hand, progress in regional or global rainfall-runoff simulation has been constrained by the difficulty of measuring spatiotemporal variability of the primary causative factor, i.e. rainfall fluxes, continuously over space and time. Building on progress in remote sensing technology, researchers have improved the accuracy, coverage, and resolution of rainfall estimates by combining imagery from infrared, passive microwave, and space-borne radar sensors. Motivated by the recent increasing availability of global remote sensing data for estimating precipitation and describing land surface characteristics, this note reports a ballpark assessment of quasi-global runoff computed by incorporating satellite rainfall data and other remote sensing products in a relatively simple rainfall-runoff simulation approach: the Natural Resources Conservation Service (NRCS) runoff Curve Number (CN) method. Using an Antecedent Precipitation Index (API) as a proxy of antecedent moisture conditions, this note estimates time-varying NRCS-CN values determined by the 5-day normalized API. Driven by multi-year (1998-2006) Tropical Rainfall Measuring Mission (TRMM) Multi-satellite Precipitation Analysis, quasi-global runoff was retrospectively simulated with the NRCS-CN method and compared to Global Runoff Data Centre data at global and catchment scales. Results demonstrated the potential for using this simple method when diagnosing runoff values from satellite rainfall for the globe and for medium to large river basins. This work was done with the simple NRCS-CN method as a first-cut approach to understanding the challenges that lie ahead in advancing the satellite-based inference of

  14. Gyrokinetic Stability Studies of the Microtearing Mode in the National Spherical Torus Experiment H-mode

    SciTech Connect

    Baumgaertel, J. A.; Redi, M. H.; Budny, R. V.; Rewoldt, G.; Dorland, W.

    2005-10-19

    Insight into plasma microturbulence and transport is being sought using linear simulations of drift waves on the National Spherical Torus Experiment (NSTX), following a study of drift wave modes on the Alcator C-Mod Tokamak. Microturbulence is likely generated by instabilities of drift waves, which cause transport of heat and particles. Understanding this transport is important because the containment of heat and particles is required for the achievement of practical nuclear fusion. Microtearing modes may cause high heat transport through high electron thermal conductivity. It is hoped that microtearing will be stable along with good electron transport in the proposed low collisionality International Thermonuclear Experimental Reactor (ITER). Stability of the microtearing mode is investigated for conditions at mid-radius in a high density NSTX high performance (H-mode) plasma, which is compared to the proposed ITER plasmas. The microtearing mode is driven by the electron temperature gradient, and believed to be mediated by ion collisions and magnetic shear. Calculations are based on input files produced by TRXPL following TRANSP (a time-dependent transport analysis code) analysis. The variability of unstable mode growth rates is examined as a function of ion and electron collisionalities using the parallel gyrokinetic computational code GS2. Results show the microtearing mode stability dependence for a range of plasma collisionalities. Computation verifies analytic predictions that higher collisionalities than in the NSTX experiment increase microtearing instability growth rates, but that the modes are stabilized at the highest values. There is a transition of the dominant mode in the collisionality scan to ion temperature gradient character at both high and low collisionalities. The calculations suggest that plasma electron thermal confinement may be greatly improved in the low-collisionality ITER.

  15. Simulation of the Universal-Time Diurnal Variation of the Global Electric Circuit Charging Rate

    NASA Technical Reports Server (NTRS)

    Mackerras, D.; Darvenzia, M.; Orville, R. E.; Williams, E. R.; Goodman, S. J.

    1999-01-01

    A global lightning model that includes diurnal and annual lightning variation, and total flash density versus latitude for each major land and ocean, has been used as the basis for simulating the global electric circuit charging rate. A particular objective has been to reconcile the difference in amplitude ratios [AR=(max-min)/mean] between global lightning diurnal variation (AR approx. = 0.8) and the diurnal variation of typical atmospheric potential gradient curves (AR approx. = 0.35). A constraint on the simulation is that the annual mean charging current should be about 1000 A. The global lightning model shows that negative ground flashes can contribute, at most, about 10-15% of the required current. For the purpose of the charging rate simulation, it was assumed that each ground flash contributes 5 C to the charging process. It was necessary to assume that all electrified clouds contribute to charging by means other than lightning, that the total flash rate can serve as an indirect indicator of the rate of charge transfer, and that oceanic electrified clouds contribute to charging even though they are relatively inefficient in producing lightning. It was also found necessary to add a diurnally invariant charging current component. By trial and error it was found that charging rate diurnal variation curves in Universal time (UT) could be produced with amplitude ratios and general shapes similar to those of the potential gradient diurnal variation curves measured over ocean and arctic regions during voyages of the Carnegie Institute research vessels.

  16. Linear dispersion relation for the mirror instability in context of the gyrokinetic theory

    SciTech Connect

    Porazik, Peter; Johnson, Jay R.

    2013-10-15

    The linear dispersion relation for the mirror instability is discussed in context of the gyrokinetic theory. The objective is to provide a coherent view of different kinetic approaches used to derive the dispersion relation. The method based on gyrocenter phase space transformations is adopted in order to display the origin and ordering of various terms.

  17. Simulated effects of nitrogen saturation on the global carbon budget using the IBIS model

    NASA Astrophysics Data System (ADS)

    Lu, Xuehe; Jiang, Hong; Liu, Jinxun; Zhang, Xiuying; Jin, Jiaxin; Zhu, Qiuan; Zhang, Zhen; Peng, Changhui

    2016-12-01

    Over the past 100 years, human activity has greatly changed the rate of atmospheric N (nitrogen) deposition in terrestrial ecosystems, resulting in N saturation in some regions of the world. The contribution of N saturation to the global carbon budget remains uncertain due to the complicated nature of C-N (carbon-nitrogen) interactions and diverse geography. Although N deposition is included in most terrestrial ecosystem models, the effect of N saturation is frequently overlooked. In this study, the IBIS (Integrated BIosphere Simulator) was used to simulate the global-scale effects of N saturation during the period 1961–2009. The results of this model indicate that N saturation reduced global NPP (Net Primary Productivity) and NEP (Net Ecosystem Productivity) by 0.26 and 0.03 Pg C yr‑1, respectively. The negative effects of N saturation on carbon sequestration occurred primarily in temperate forests and grasslands. In response to elevated CO2 levels, global N turnover slowed due to increased biomass growth, resulting in a decline in soil mineral N. These changes in N cycling reduced the impact of N saturation on the global carbon budget. However, elevated N deposition in certain regions may further alter N saturation and C-N coupling.

  18. Simulated effects of nitrogen saturation on the global carbon budget using the IBIS model

    PubMed Central

    Lu, Xuehe; Jiang, Hong; Liu, Jinxun; Zhang, Xiuying; Jin, Jiaxin; Zhu, Qiuan; Zhang, Zhen; Peng, Changhui

    2016-01-01

    Over the past 100 years, human activity has greatly changed the rate of atmospheric N (nitrogen) deposition in terrestrial ecosystems, resulting in N saturation in some regions of the world. The contribution of N saturation to the global carbon budget remains uncertain due to the complicated nature of C-N (carbon-nitrogen) interactions and diverse geography. Although N deposition is included in most terrestrial ecosystem models, the effect of N saturation is frequently overlooked. In this study, the IBIS (Integrated BIosphere Simulator) was used to simulate the global-scale effects of N saturation during the period 1961–2009. The results of this model indicate that N saturation reduced global NPP (Net Primary Productivity) and NEP (Net Ecosystem Productivity) by 0.26 and 0.03 Pg C yr−1, respectively. The negative effects of N saturation on carbon sequestration occurred primarily in temperate forests and grasslands. In response to elevated CO2 levels, global N turnover slowed due to increased biomass growth, resulting in a decline in soil mineral N. These changes in N cycling reduced the impact of N saturation on the global carbon budget. However, elevated N deposition in certain regions may further alter N saturation and C-N coupling. PMID:27966643

  19. Simulated effects of nitrogen saturation on the global carbon budget using the IBIS model.

    PubMed

    Lu, Xuehe; Jiang, Hong; Liu, Jinxun; Zhang, Xiuying; Jin, Jiaxin; Zhu, Qiuan; Zhang, Zhen; Peng, Changhui

    2016-12-14

    Over the past 100 years, human activity has greatly changed the rate of atmospheric N (nitrogen) deposition in terrestrial ecosystems, resulting in N saturation in some regions of the world. The contribution of N saturation to the global carbon budget remains uncertain due to the complicated nature of C-N (carbon-nitrogen) interactions and diverse geography. Although N deposition is included in most terrestrial ecosystem models, the effect of N saturation is frequently overlooked. In this study, the IBIS (Integrated BIosphere Simulator) was used to simulate the global-scale effects of N saturation during the period 1961-2009. The results of this model indicate that N saturation reduced global NPP (Net Primary Productivity) and NEP (Net Ecosystem Productivity) by 0.26 and 0.03 Pg C yr(-1), respectively. The negative effects of N saturation on carbon sequestration occurred primarily in temperate forests and grasslands. In response to elevated CO2 levels, global N turnover slowed due to increased biomass growth, resulting in a decline in soil mineral N. These changes in N cycling reduced the impact of N saturation on the global carbon budget. However, elevated N deposition in certain regions may further alter N saturation and C-N coupling.

  20. Simulated effects of nitrogen saturation the global carbon budget using the IBIS model

    USGS Publications Warehouse

    Lu, Xuehe; Jiang, Hong; Liu, Jinxun; Zhang, Xiuying; Jin, Jiaxin; Zhu, Qiuan; Zhang, Zhen; Peng, Changhui

    2016-01-01

    Over the past 100 years, human activity has greatly changed the rate of atmospheric N (nitrogen) deposition in terrestrial ecosystems, resulting in N saturation in some regions of the world. The contribution of N saturation to the global carbon budget remains uncertain due to the complicated nature of C-N (carbon-nitrogen) interactions and diverse geography. Although N deposition is included in most terrestrial ecosystem models, the effect of N saturation is frequently overlooked. In this study, the IBIS (Integrated BIosphere Simulator) was used to simulate the global-scale effects of N saturation during the period 1961–2009. The results of this model indicate that N saturation reduced global NPP (Net Primary Productivity) and NEP (Net Ecosystem Productivity) by 0.26 and 0.03 Pg C yr−1, respectively. The negative effects of N saturation on carbon sequestration occurred primarily in temperate forests and grasslands. In response to elevated CO2 levels, global N turnover slowed due to increased biomass growth, resulting in a decline in soil mineral N. These changes in N cycling reduced the impact of N saturation on the global carbon budget. However, elevated N deposition in certain regions may further alter N saturation and C-N coupling.

  1. A time-dependent gyro-kinetic model of thermal ion upflows in the high-latitude F region

    NASA Technical Reports Server (NTRS)

    Loranc, M.; St.-Maurice, J.-P.

    1994-01-01

    Ample evidence supports the significance of the high-latitude ionospheric contribution to magnetospheric plasma. Assuming flux conservation along a flux tube, the upward field-aligned ion flows observed in the magnetosphere require high-latitude ionospheric field-aligned ion upflows of the order of 10(exp 8) to 10(exp 9)/sq cm/s. Since radar and satellite observations of high-latitude F region flows at times exceed this flux requirement by an order of magnitude, the thermal ionospheric upflows are not simply the ionospheric response to a magnetospheric flux requirement. Several ionospheric ion upflow mechanisms have been proposed, but simulations based on fluid theory do not reproduce all the observed features of ionospheric ion upflows. Certain asymmetries in the statistical morphology of high-latitude F region ion upflows suggest that the ion upflows may be generated by ion-neutral frictional heating. We developed a single-component (O(+)), time-dependent gyro-kinetic model of the high-latitude F region response to frictional heating in which the neutral exobase is a discontinuous boundary between fully collisional and collisionless plasmas. The concept of a discontinuous neutreal exobase and the assumption of a constant and uniform polarization electric field reduce the ion velocity distribution function, from which we can compute the ion density, parallel velocity, parallel and perpendicular temperature, and parallel flux. Using our model, we simulated the response of a convecting flux tube between 500 km and 2500 km to various frictional heating inputs; the results were both qualitatively and quantitatively different from fluid model results, which may indicate an inadequacy of the fluid theory approach. The gyro-kinetic frictional heating model responses to the various simulations were qualitatively similar: (1) initial perturbations of all the modeled parameters propagated rapidly up the flux tube, (2) transient values of the ion parallel velocity

  2. Comparative energetics of the observed and simulated global circulation during the special observing periods of FGGE

    NASA Technical Reports Server (NTRS)

    Kung, E. C.; Baker, W. E.

    1986-01-01

    Energetics of the observed and simulated global circulation are evaluated in the zonal spectral domain for the special observing periods of FGGE. The study utilizes GLA analyses of FGGE observational data and parallel simulation experiments. There are noticeable differences in energy transformations between the observation and simulation during SOP-1. These include the baroclinic conversion C(n) by the zonal mean motion and short-wave disturbances, and the nonlinear wave-wave interaction L(n) at the long and short waves. The energy transformations of the short-wave disturbances are much more intense in the simulated circulation than in the observation. However, good agreement is noted in the conversion and dissipation of kinetic energy in the large- and cyclone-wave range n = 1-10. Spectral distributions of global energy transformations at the long- and cyclone-wave range indicate that the SOP-2 simulation agrees more closely with the observed fields than the SOP-1 simulation. Other pertinent points of energetics diagnosis are also included in the discussion.

  3. Simulation of ion-temperature-gradient turbulence in tokamaks

    SciTech Connect

    Cohen, B I; Dimits, A M; Kim, C; Mattor, N; Nevins, W M; Parker, S E; Shumaker, D E

    1998-10-14

    Results are presented from nonlinear gyrokinetic simulations of toroidal ion temperature gradient (ITG) turbulence and transport. The gyrokinetic simulations are found to yield values of the thermal diffusivity significantly lower than gyrofluid or IFS-PPPL-model predictions. A new phenomenon of nonlinear effective critical gradients larger than the linear instability threshold gradients is observed, and is associated with undamped flux-surface-averaged shear flows. The nonlinear gyrokineic codes have passed extensive validity tests which include comparison against independent linear calculations, a series of nonlinear convergence tests, and a comparison between two independent nonlinear gyrokinetic codes. Our most realistic simulations to date have actual reconstructed equilibria from experiments and a model for dilution by impurity and beam ions. These simulations highlight the need for still more physics to be included in the simulations

  4. High-resolution global climate modelling: the UPSCALE project, a large-simulation campaign

    NASA Astrophysics Data System (ADS)

    Mizielinski, M. S.; Roberts, M. J.; Vidale, P. L.; Schiemann, R.; Demory, M.-E.; Strachan, J.; Edwards, T.; Stephens, A.; Lawrence, B. N.; Pritchard, M.; Chiu, P.; Iwi, A.; Churchill, J.; del Cano Novales, C.; Kettleborough, J.; Roseblade, W.; Selwood, P.; Foster, M.; Glover, M.; Malcolm, A.

    2014-08-01

    The UPSCALE (UK on PRACE: weather-resolving Simulations of Climate for globAL Environmental risk) project constructed and ran an ensemble of HadGEM3 (Hadley Centre Global Environment Model 3) atmosphere-only global climate simulations over the period 1985-2011, at resolutions of N512 (25 km), N216 (60 km) and N96 (130 km) as used in current global weather forecasting, seasonal prediction and climate modelling respectively. Alongside these present climate simulations a parallel ensemble looking at extremes of future climate was run, using a time-slice methodology to consider conditions at the end of this century. These simulations were primarily performed using a 144 million core hour, single year grant of computing time from PRACE (the Partnership for Advanced Computing in Europe) in 2012, with additional resources supplied by the Natural Environment Research Council (NERC) and the Met Office. Almost 400 terabytes of simulation data were generated on the HERMIT supercomputer at the High Performance Computing Center Stuttgart (HLRS), and transferred to the JASMIN super-data cluster provided by the Science and Technology Facilities Council Centre for Data Archival (STFC CEDA) for analysis and storage. In this paper we describe the implementation of the project, present the technical challenges in terms of optimisation, data output, transfer and storage that such a project involves and include details of the model configuration and the composition of the UPSCALE data set. This data set is available for scientific analysis to allow assessment of the value of model resolution in both present and potential future climate conditions.

  5. Transient simulation of global changes of the hydrological cycle during the last deglaciation (Invited)

    NASA Astrophysics Data System (ADS)

    He, F.; Shakun, J. D.; Clark, P. U.

    2013-12-01

    The future changes of the hydrological cycle caused by the anthropogenic carbon emission have great impact on regional water management, national food security and global health. The IPCC AR4 report concluded that it is very likely that the frequency of heavy rainfall will increase over most of the land area, while area affected by drought will likely increase as well. However, the level of the scientific understanding of the hydrological changes is hindered by the short instrumental records and the inherent delay of the response of climate system to greenhouse gas forcing. The last deglaciation witnessed the last natural global warming and represents the unique opportunity to overcome the above challenges when carbon dioxide concentrations rose from 185 ppm to 260 ppm over the approximately 10,000 years. Clark et al. [2012, PNAS] has compiled the changes of the global hydrological cycle during the last deglaciation with 39 high-resolution precipitation proxies over the land area. Here we compare the transient simulation of the last deglaciation in fully coupled Community Climate System Model version 3 (CCSM3) with the reconstructed hydrological changes to check whether the current climate models used to predict the future is capable of reproducing the evolution of global hydrological cycle in the past. Over Greenland, the transient simulation reproduces the abrupt increase of precipitation during the Bølling and the reduction of precipitation during the Younger Dryas (YD). The transient simulation also reproduces the global impacts of these abrupt climate events. In the Arabian Sea, the transient simulation produces the decrease of precipitation during the Oldest Dryas (OD) and YD, and the increase of precipitation during the Bølling. In South America, the transient simulation reproduces the meridional shifts of the ITCZ, with increase of precipitation over Brazil and Bolivia during the OD and YD and decrease of precipitation during the Bølling. The transient

  6. Comparison of empirical magnetic field models and global MHD simulations: The near-tail currents

    NASA Technical Reports Server (NTRS)

    Pulkkinen, T. I.; Baker, D. N.; Walker, R. J.; Raeder, J.; Ashour-Abdalla, M.

    1995-01-01

    The tail currents predicted by empirical magnetic field models and global MHD simulations are compared. It is shown that the near-Earth currents obtained from the MHD simulations are much weaker than the currents predicted by the Tsyganenko models, primarily because the ring current is not properly represented in the simulations. On the other hand, in the mid-tail and distant tail the lobe field strength predicted by the simulations is comparable to what is observed at about 50 R(sub E) distance, significantly larger than the very low lobe field values predicted by the Tsyganenko models at that distance. Ways to improve these complementary approaches to model the actual magnetospheric configuration are discussed.

  7. MAGNETIC CYCLES IN GLOBAL LARGE-EDDY SIMULATIONS OF SOLAR CONVECTION

    SciTech Connect

    Ghizaru, Mihai; Charbonneau, Paul; Smolarkiewicz, Piotr K.

    2010-06-01

    We report on a global magnetohydrodynamical simulation of the solar convection zone, which succeeds in generating a large-scale axisymmetric magnetic component, antisymmetric about the equatorial plane and undergoing regular polarity reversals on decadal timescales. We focus on a specific simulation run covering 255 years, during which 8 polarity reversals are observed, with a mean period of 30 years. Time-latitude slices of the zonally averaged toroidal magnetic component at the base of the convecting envelope show a well-organized toroidal flux system building up in each solar hemisphere, peaking at mid-latitudes and migrating toward the equator in the course of each cycle, in remarkable agreement with inferences based on the sunspot butterfly diagram. The simulation also produces a large-scale dipole moment, varying in phase with the internal toroidal component, suggesting that the simulation may be operating as what is known in mean-field theory as an {alpha}{Omega} dynamo.

  8. A vertically resolved, global, gap-free ozone database for assessing or constraining global climate model simulations

    NASA Astrophysics Data System (ADS)

    Bodeker, G. E.; Hassler, B.; Young, P. J.; Portmann, R. W.

    2013-02-01

    High vertical resolution ozone measurements from eight different satellite-based instruments have been merged with data from the global ozonesonde network to calculate monthly mean ozone values in 5° latitude zones. These ''Tier 0'' ozone number densities and ozone mixing ratios are provided on 70 altitude levels (1 to 70 km) and on 70 pressure levels spaced ~ 1 km apart (878.4 hPa to 0.046 hPa). The Tier 0 data are sparse and do not cover the entire globe or altitude range. To provide a gap-free database, a least squares regression model is fitted to the Tier 0 data and then evaluated globally. The regression model fit coefficients are expanded in Legendre polynomials to account for latitudinal structure, and in Fourier series to account for seasonality. Regression model fit coefficient patterns, which are two dimensional fields indexed by latitude and month of the year, from the N-th vertical level serve as an initial guess for the fit at the N + 1-th vertical level. The initial guess field for the first fit level (20 km/58.2 hPa) was derived by applying the regression model to total column ozone fields. Perturbations away from the initial guess are captured through the Legendre and Fourier expansions. By applying a single fit at each level, and using the approach of allowing the regression fits to change only slightly from one level to the next, the regression is less sensitive to measurement anomalies at individual stations or to individual satellite-based instruments. Particular attention is paid to ensuring that the low ozone abundances in the polar regions are captured. By summing different combinations of contributions from different regression model basis functions, four different ''Tier 1'' databases have been compiled for different intended uses. This database is suitable for assessing ozone fields from chemistry-climate model simulations or for providing the ozone boundary conditions for global climate model simulations that do not treat stratospheric

  9. A vertically resolved, global, gap-free ozone database for assessing or constraining global climate model simulations

    NASA Astrophysics Data System (ADS)

    Bodeker, G. E.; Hassler, B.; Young, P. J.; Portmann, R. W.

    2012-10-01

    High vertical resolution ozone measurements from eight different satellite-based instruments have been merged with data from the global ozonesonde network to calculate monthly mean ozone values in 5° latitude zones. These "Tier 0" ozone number densities and ozone mixing ratios are provided on 70 altitude levels (1 to 70 km) and on 70 pressure levels spaced ~1 km apart (878.4 hPa to 0.046 hPa). The Tier 0 data are sparse and do not cover the entire globe or altitude range. To provide a gap-free database, a least squares regression model is fitted to the Tier 0 data and then evaluated globally. The regression model fit coefficients are expanded in Legendre polynomials to account for latitudinal structure, and in Fourier series to account for seasonality. Regression model fit coefficient patterns, which are two dimensional fields indexed by latitude and month of the year, from the N-th vertical level serve as an initial guess for the fit at the N+1th vertical level. The initial guess field for the first fit level (20 km/58.2 hPa) was derived by applying the regression model to total column ozone fields. Perturbations away from the initial guess are captured through the Legendre and Fourier expansions. By applying a single fit at each level, and using the approach of allowing the regression fits to change only slightly from one level to the next, the regression is less sensitive to measurement anomalies at individual stations or to individual satellite-based instruments. Particular attention is paid to ensuring that the low ozone abundances in the polar regions are captured. By summing different combinations of contributions from different regression model basis functions, four different "Tier 1" databases have been compiled for different intended uses. This database is suitable for assessing ozone fields from chemistry-climate model simulations or for providing the ozone boundary conditions for global climate model simulations that do not treat stratospheric

  10. Cold gas in cluster cores: global stability analysis and non-linear simulations of thermal instability

    NASA Astrophysics Data System (ADS)

    Choudhury, Prakriti Pal; Sharma, Prateek

    2016-04-01

    We perform global linear stability analysis and idealized numerical simulations in global thermal balance to understand the condensation of cold gas from hot/virial atmospheres (coronae), in particular the intracluster medium (ICM). We pay particular attention to geometry (e.g. spherical versus plane-parallel) and the nature of the gravitational potential. Global linear analysis gives a similar value for the fastest growing thermal instability modes in spherical and Cartesian geometries. Simulations and observations suggest that cooling in haloes critically depends on the ratio of the cooling time to the free-fall time (tcool/tff). Extended cold gas condenses out of the ICM only if this ratio is smaller than a threshold value close to 10. Previous works highlighted the difference between the nature of cold gas condensation in spherical and plane-parallel atmospheres; namely, cold gas condensation appeared easier in spherical atmospheres. This apparent difference due to geometry arises because the previous plane-parallel simulations focused on in situ condensation of multiphase gas but spherical simulations studied condensation anywhere in the box. Unlike previous claims, our non-linear simulations show that there are only minor differences in cold gas condensation, either in situ or anywhere, for different geometries. The amount of cold gas depends on the shape of tcool/tff; gas has more time to condense if gravitational acceleration decreases towards the centre. In our idealized plane-parallel simulations with heating balancing cooling in each layer, there can be significant mass/energy/momentum transfer across layers that can trigger condensation and drive tcool/tff far beyond the critical value close to 10.

  11. SciDAC - Center for Plasma Edge Simulation - Project Summary

    SciTech Connect

    Parker, Scott

    2014-11-03

    Final Technical Report: Center for Plasma Edge Simulation (CPES) Principal Investigator: Scott Parker, University of Colorado, Boulder Description/Abstract First-principle simulations of edge pedestal micro-turbulence are performed with the global gyrokinetic turbulence code GEM for both low and high confinement tokamak plasmas. The high confinement plasmas show a larger growth rate, but nonlinearly a lower particle and heat flux. Numerical profiles are obtained from the XGC0 neoclassical code. XGC0/GEM code coupling is implemented under the EFFIS (“End-to-end Framework for Fusion Integrated Simulation”) framework. Investigations are underway to clearly identify the micro-instabilities in the edge pedestal using global and flux-tube gyrokinetic simulation with realistic experimental high confinement profiles. We use both experimental profiles and those obtained using the EFFIS XGC0/GEM coupled code framework. We find there are three types of instabilities at the edge: a low-n, high frequency electron mode, a high-n, low frequency ion mode, and possibly an ion mode like kinetic ballooning mode (KBM). Investigations are under way for the effects of the radial electric field. Finally, we have been investigating how plasmas dominated by ion-temperature gradient (ITG) driven turbulence, how cold Deuterium and Tritium ions near the edge will naturally pinch radially inward towards the core. We call this mechanism “natural fueling.” It is due to the quasi-neutral heat flux dominated nature of the turbulence and still applies when trapped and passing kinetic electron effects are included. To understand this mechanism, examine the situation where the electrons are adiabatic, and there is an ion heat flux. In such a case, lower energy particles move inward and higher energy particles move outward. If a trace amount of cold particles are added, they will move inward.

  12. Simulated Stochastic Approximation Annealing for Global Optimization with a Square-Root Cooling Schedule

    SciTech Connect

    Liang, Faming; Cheng, Yichen; Lin, Guang

    2014-06-13

    Simulated annealing has been widely used in the solution of optimization problems. As known by many researchers, the global optima cannot be guaranteed to be located by simulated annealing unless a logarithmic cooling schedule is used. However, the logarithmic cooling schedule is so slow that no one can afford to have such a long CPU time. This paper proposes a new stochastic optimization algorithm, the so-called simulated stochastic approximation annealing algorithm, which is a combination of simulated annealing and the stochastic approximation Monte Carlo algorithm. Under the framework of stochastic approximation Markov chain Monte Carlo, it is shown that the new algorithm can work with a cooling schedule in which the temperature can decrease much faster than in the logarithmic cooling schedule, e.g., a square-root cooling schedule, while guaranteeing the global optima to be reached when the temperature tends to zero. The new algorithm has been tested on a few benchmark optimization problems, including feed-forward neural network training and protein-folding. The numerical results indicate that the new algorithm can significantly outperform simulated annealing and other competitors.

  13. A Madden-Julian oscillation event realistically simulated by a global cloud-resolving model.

    PubMed

    Miura, Hiroaki; Satoh, Masaki; Nasuno, Tomoe; Noda, Akira T; Oouchi, Kazuyoshi

    2007-12-14

    A Madden-Julian Oscillation (MJO) is a massive weather event consisting of deep convection coupled with atmospheric circulation, moving slowly eastward over the Indian and Pacific Oceans. Despite its enormous influence on many weather and climate systems worldwide, it has proven very difficult to simulate an MJO because of assumptions about cumulus clouds in global meteorological models. Using a model that allows direct coupling of the atmospheric circulation and clouds, we successfully simulated the slow eastward migration of an MJO event. Topography, the zonal sea surface temperature gradient, and interplay between eastward- and westward-propagating signals controlled the timing of the eastward transition of the convective center. Our results demonstrate the potential making of month-long MJO predictions when global cloud-resolving models with realistic initial conditions are used.

  14. CYCLIC THERMAL SIGNATURE IN A GLOBAL MHD SIMULATION OF SOLAR CONVECTION

    SciTech Connect

    Cossette, Jean-Francois; Charbonneau, Paul; Smolarkiewicz, Piotr K.

    2013-11-10

    Global magnetohydrodynamical simulations of the solar convection zone have recently achieved cyclic large-scale axisymmetric magnetic fields undergoing polarity reversals on a decadal time scale. In this Letter, we show that these simulations also display a thermal convective luminosity that varies in-phase with the magnetic cycle, and trace this modulation to deep-seated magnetically mediated changes in convective flow patterns. Within the context of the ongoing debate on the physical origin of the observed 11 yr variations in total solar irradiance, such a signature supports the thesis according to which all, or part, of the variations on decadal time scales and longer could be attributed to a global modulation of the Sun's internal thermal structure by magnetic activity.

  15. A Global Approach to the Physics Validation of Simulation Codes for Future Nuclear Systems

    SciTech Connect

    Giuseppe Palmiotti; Massimo Salvatores; Gerardo Aliberti; Hikarui Hiruta; R. McKnight; P. Oblozinsky; W. S. Yang

    2008-09-01

    This paper presents a global approach to the validation of the parameters that enter into the neutronics simulation tools for advanced fast reactors with the objective to reduce the uncertainties associated to crucial design parameters. This global approach makes use of sensitivity/uncertainty methods; statistical data adjustments; integral experiment selection, analysis and “representativity” quantification with respect to a reference system; scientifically based cross section covariance data and appropriate methods for their use in multigroup calculations. This global approach has been applied to the uncertainty reduction on the criticality of the Advanced Burner Reactor, (both metal and oxide core versions) presently investigated in the frame of the GNEP initiative. The results obtained are very encouraging and allow to indicate some possible improvements of the ENDF/B-VII data file.

  16. Spatial and Temporal Signatures of Flux Transfer Events in Global Simulations of Magnetopause Dynamics

    NASA Technical Reports Server (NTRS)

    Kuznetsova, Maria M.; Sibeck, David Gary; Hesse, Michael; Berrios, David; Rastaetter, Lutz; Toth, Gabor; Gombosi, Tamas I.

    2011-01-01

    Flux transfer events (FTEs) were originally identified by transient bipolar variations of the magnetic field component normal to the nominal magnetopause centered on enhancements in the total magnetic field strength. Recent Cluster and THEMIS multi-point measurements provided a wide range of signatures that are interpreted as evidence for FTE passage (e.g., crater FTE's, traveling magnetic erosion regions). We use the global magnetohydrodynamic (MHD) code BATS-R-US developed at the University of Michigan to model the global three-dimensional structure and temporal evolution of FTEs during multi-spacecraft magnetopause crossing events. Comparison of observed and simulated signatures and sensitivity analysis of the results to the probe location will be presented. We will demonstrate a variety of observable signatures in magnetic field profile that depend on space probe location with respect to the FTE passage. The global structure of FTEs will be illustrated using advanced visualization tools developed at the Community Coordinated Modeling Center

  17. Rating global magnetosphere model simulations through statistical data-model comparisons

    NASA Astrophysics Data System (ADS)

    Ridley, A. J.; De Zeeuw, D. L.; Rastätter, L.

    2016-10-01

    The Community Coordinated Modeling Center (CCMC) was created in 2000 to allow researchers to remotely run simulations and explore the results through online tools. Since that time, over 10,000 simulations have been conducted at CCMC through their runs-on-request service. Many of those simulations have been event studies using global magnetohydrodynamic (MHD) models of the magnetosphere. All of these simulations are available to the general public to explore and utilize. Many of these simulations have had virtual satellites flown through the model to extract the simulation results at the satellite location as a function of time. This study used 662 of these magnetospheric simulations, with a total of 2503 satellite traces, to statistically compare the magnetic field simulated by models to the satellite data. Ratings for each satellite trace were created by comparing the root-mean-square error of the trace with all of the other traces for the given satellite and magnetic field component. The 1-5 ratings, with 5 being the best quality run, are termed "stars." From these star ratings, a few conclusions were made: (1) Simulations tend to have a lower rating for higher levels of activity; (2) there was a clear bias in the Bz component of the simulations at geosynchronous orbit, implying that the models were challenged in simulating the inner magnetospheric dynamics correctly; and (3) the highest performing model included a coupled ring current model, which was about 0.15 stars better on average than the same model without the ring current model coupling.

  18. Evaluation of Regional Climate Simulations over the Great Lakes Region Driven by Three Global Data Sets

    SciTech Connect

    Zhong, Shiyuan; Li, Xiuping; Bian, Xindi; Heilman, Warren E.; Leung, Lai-Yung R.; Gustafson, William I.

    2012-06-27

    The performance of regional climate simulations is evaluated for the Great Lakes region. Three 10-year (1990–1999) current-climate simulations are performed using the MM5 regional climate model (RCM) with 36-km horizontal resolution. The simulations employed identical configuration and physical parameterizations, but different lateral boundary conditions and sea-surface temperatures derived from the NCEP Global Reanalysis and output from the CCSM3 and GISS general circulation models (GCMs). The simulation results are compared to the North American Regional Reanalysis (NARR). The three RCM simulations appeared to be more accurate in winter and least accurate in summer, and more accurate aloft than near the surface. The reanalysis-constrained simulation adequately captured the spatial distribution and seasonal cycle of the observed surface-air temperature and precipitation, but it produced consistently across all seasons a cold bias that is generally larger over the lakes than over land and a wet bias due to an overestimation of nonconvective precipitation. The simulated seasonal cycle of moisture–flux convergence over the region was in very good agreement with NARR. The two GCM-driven runs adequately simulated the spatial and seasonal variation of temperature, but overestimated cold-season precipitation and underestimated summer precipitation, reversing the observed annual precipitation cycle. The GISS-driven run failed to simulate the prevailing low-level flow and moisture convergence patterns. All three RCM simulations successfully captured the impact of the Great Lakes on the region's climate, especially on winter precipitation, a significant improvement over coarse-resolution GCM simulations over the region.

  19. Recent results from the GISS model of the global atmosphere. [circulation simulation for weather forecasting

    NASA Technical Reports Server (NTRS)

    Somerville, R. C. J.

    1975-01-01

    Large numerical atmospheric circulation models are in increasingly widespread use both for operational weather forecasting and for meteorological research. The results presented here are from a model developed at the Goddard Institute for Space Studies (GISS) and described in detail by Somerville et al. (1974). This model is representative of a class of models, recently surveyed by the Global Atmospheric Research Program (1974), designed to simulate the time-dependent, three-dimensional, large-scale dynamics of the earth's atmosphere.

  20. A 1/16° eddying simulation of the global NEMO sea-ice-ocean system

    NASA Astrophysics Data System (ADS)

    Iovino, Doroteaciro; Masina, Simona; Storto, Andrea; Cipollone, Andrea; Stepanov, Vladimir N.

    2016-08-01

    Analysis of a global eddy-resolving simulation using the NEMO general circulation model is presented. The model has 1/16° horizontal spacing at the Equator, employs two displaced poles in the Northern Hemisphere, and uses 98 vertical levels. The simulation was spun up from rest and integrated for 11 model years, using ERA-Interim reanalysis as surface forcing. Primary intent of this hindcast is to test how the model represents upper ocean characteristics and sea ice properties. Analysis of the zonal averaged temperature and salinity, and the mixed layer depth indicate that the model average state is in good agreement with observed fields and that the model successfully represents the variability in the upper ocean and at intermediate depths. Comparisons against observational estimates of mass transports through key straits indicate that most aspects of the model circulation are realistic. As expected, the simulation exhibits turbulent behaviour and the spatial distribution of the sea surface height (SSH) variability from the model is close to the observed pattern. The distribution and volume of the sea ice are, to a large extent, comparable to observed values. Compared with a corresponding eddy-permitting configuration, the performance of the model is significantly improved: reduced temperature and salinity biases, in particular at intermediate depths, improved mass and heat transports, better representation of fluxes through narrow and shallow straits, and increased global-mean eddy kinetic energy (by ˜ 40 %). However, relatively minor weaknesses still exist such as a lower than observed magnitude of the SSH variability. We conclude that the model output is suitable for broader analysis to better understand upper ocean dynamics and ocean variability at global scales. This simulation represents a major step forward in the global ocean modelling at the Euro-Mediterranean Centre on Climate Change and constitutes the groundwork for future applications to short

  1. CFD simulation of local and global mixing time in an agitated tank

    NASA Astrophysics Data System (ADS)

    Li, Liangchao; Xu, Bin

    2017-01-01

    The Issue of mixing efficiency in agitated tanks has drawn serious concern in many industrial processes. The turbulence model is very critical to predicting mixing process in agitated tanks. On the basis of computational fluid dynamics(CFD) software package Fluent 6.2, the mixing characteristics in a tank agitated by dual six-blade-Rushton-turbines(6-DT) are predicted using the detached eddy simulation(DES) method. A sliding mesh(SM) approach is adopted to solve the rotation of the impeller. The simulated flow patterns and liquid velocities in the agitated tank are verified by experimental data in the literature. The simulation results indicate that the DES method can obtain more flow details than Reynolds-averaged Navier-Stokes(RANS) model. Local and global mixing time in the agitated tank is predicted by solving a tracer concentration scalar transport equation. The simulated results show that feeding points have great influence on mixing process and mixing time. Mixing efficiency is the highest for the feeding point at location of midway of the two impellers. Two methods are used to determine global mixing time and get close result. Dimensionless global mixing time remains unchanged with increasing of impeller speed. Parallel, merging and diverging flow pattern form in the agitated tank, respectively, by changing the impeller spacing and clearance of lower impeller from the bottom of the tank. The global mixing time is the shortest for the merging flow, followed by diverging flow, and the longest for parallel flow. The research presents helpful references for design, optimization and scale-up of agitated tanks with multi-impeller.

  2. Quantum simulators based on the global collective light-matter interaction

    NASA Astrophysics Data System (ADS)

    Caballero-Benitez, Santiago F.; Mazzucchi, Gabriel; Mekhov, Igor B.

    2016-06-01

    We show that coupling ultracold atoms in optical lattices to quantized modes of an optical cavity leads to quantum phases of matter, which at the same time possess properties of systems with both short- and long-range interactions. This opens perspectives for novel quantum simulators of finite-range interacting systems, even though the light-induced interaction is global (i.e., infinitely long range). This is achieved by spatial structuring of the global light-matter coupling at a microscopic scale. Such simulators can directly benefit from the collective enhancement of the global light-matter interaction and constitute an alternative to standard approaches using Rydberg atoms or polar molecules. The system in the steady state of light induces effective many-body interactions that change the landscape of the phase diagram of the typical Bose-Hubbard model. Therefore, the system can support nontrivial superfluid states, bosonic dimer, trimer, etc., states, and supersolid phases depending on the choice of the wavelength and pattern of the light with respect to the classical optical lattice potential. We find that by carefully choosing the system parameters one can investigate diverse strongly correlated physics with the same setup, i.e., modifying the geometry of light beams. In particular, we present the interplay between the density and bond (or matter-wave coherence) interactions. We show how to tune the effective interaction length in such a hybrid system with both short-range and global interactions.

  3. Advanced Distributed Simulation Technology II Global Positioning System Interactive Simulation (GPS DIS) Experiment

    DTIC Science & Technology

    2007-11-02

    RWA Manned Simulators 11 3.2.6 Voice Radio Communications: SRE & ASTi 11 3.2.7 ModSAF Operations 11 3.2.8 Data Logger 12 3.2.9 Time Stamper 12...utilized were the Single Channel Ground and Airborne Radio System (SINCGARS) Radio Emulator (SRE), the ASTi Radio, and the Tactical Internet Model (TIM...SGIs at the MWTB and ASTi radios at Ft. Rucker. These two Approved for public release; distribution is unlimited 4 ADST-II-CDRL-GPSDIS-9800018A

  4. Comparing the model-simulated global warming signal to observations using empirical estimates of unforced noise

    PubMed Central

    Brown, Patrick T.; Li, Wenhong; Cordero, Eugene C.; Mauget, Steven A.

    2015-01-01

    The comparison of observed global mean surface air temperature (GMT) change to the mean change simulated by climate models has received much public and scientific attention. For a given global warming signal produced by a climate model ensemble, there exists an envelope of GMT values representing the range of possible unforced states of the climate system (the Envelope of Unforced Noise; EUN). Typically, the EUN is derived from climate models themselves, but climate models might not accurately simulate the correct characteristics of unforced GMT variability. Here, we simulate a new, empirical, EUN that is based on instrumental and reconstructed surface temperature records. We compare the forced GMT signal produced by climate models to observations while noting the range of GMT values provided by the empirical EUN. We find that the empirical EUN is wide enough so that the interdecadal variability in the rate of global warming over the 20th century does not necessarily require corresponding variability in the rate-of-increase of the forced signal. The empirical EUN also indicates that the reduced GMT warming over the past decade or so is still consistent with a middle emission scenario's forced signal, but is likely inconsistent with the steepest emission scenario's forced signal. PMID:25898351

  5. Towards Direct Simulation of Future Tropical Cyclone Statistics in a High-Resolution Global Atmospheric Model

    DOE PAGES

    Wehner, Michael F.; Bala, G.; Duffy, Phillip; ...

    2010-01-01

    We present a set of high-resolution global atmospheric general circulation model (AGCM) simulations focusing on the model's ability to represent tropical storms and their statistics. We find that the model produces storms of hurricane strength with realistic dynamical features. We also find that tropical storm statistics are reasonable, both globally and in the north Atlantic, when compared to recent observations. The sensitivity of simulated tropical storm statistics to increases in sea surface temperature (SST) is also investigated, revealing that a credible late 21st century SST increase produced increases in simulated tropical storm numbers and intensities in all ocean basins. Whilemore » this paper supports previous high-resolution model and theoretical findings that the frequency of very intense storms will increase in a warmer climate, it differs notably from previous medium and high-resolution model studies that show a global reduction in total tropical storm frequency. However, we are quick to point out that this particular model finding remains speculative due to a lack of radiative forcing changes in our time-slice experiments as well as a focus on the Northern hemisphere tropical storm seasons.« less

  6. Global network of embodied water flow by systems input-output simulation

    NASA Astrophysics Data System (ADS)

    Chen, Zhanming; Chen, Guoqian; Xia, Xiaohua; Xu, Shiyun

    2012-09-01

    The global water resources network is simulated in the present work for the latest target year with statistical data available and with the most detailed data disaggregation. A top-down approach of systems inputoutput simulation is employed to track the embodied water flows associated with economic flows for the globalized economy in 2004. The numerical simulation provides a database of embodied water intensities for all economic commodities from 4928 producers, based on which the differences between direct and indirect water using efficiencies at the global scale are discussed. The direct and embodied water uses are analyzed at continental level. Besides, the commodity demand in terms of monetary expenditure and the water demand in terms of embodied water use are compared for the world as well as for three major water using regions, i.e., India, China, and the United States. Results show that food product contributes to a significant fraction for water demand, despite the value varies significantly with respect to the economic status of region.

  7. Comparing the model-simulated global warming signal to observations using empirical estimates of unforced noise.

    PubMed

    Brown, Patrick T; Li, Wenhong; Cordero, Eugene C; Mauget, Steven A

    2015-04-21

    The comparison of observed global mean surface air temperature (GMT) change to the mean change simulated by climate models has received much public and scientific attention. For a given global warming signal produced by a climate model ensemble, there exists an envelope of GMT values representing the range of possible unforced states of the climate system (the Envelope of Unforced Noise; EUN). Typically, the EUN is derived from climate models themselves, but climate models might not accurately simulate the correct characteristics of unforced GMT variability. Here, we simulate a new, empirical, EUN that is based on instrumental and reconstructed surface temperature records. We compare the forced GMT signal produced by climate models to observations while noting the range of GMT values provided by the empirical EUN. We find that the empirical EUN is wide enough so that the interdecadal variability in the rate of global warming over the 20(th) century does not necessarily require corresponding variability in the rate-of-increase of the forced signal. The empirical EUN also indicates that the reduced GMT warming over the past decade or so is still consistent with a middle emission scenario's forced signal, but is likely inconsistent with the steepest emission scenario's forced signal.

  8. Confronting Pedagogy in "Confronting Globalization": The Use of Role-Play Simulations to Foster Interdisciplinary/Global Learning

    ERIC Educational Resources Information Center

    DeNardis, Lesley A.

    2015-01-01

    With the increasing emphasis on global learning as part of the redesigned institutional mission of American higher education, there will arguably be a need for a variety of global learning experiences across the undergraduate curriculum. Efforts to incorporate global learning in course content at home by globalizing or internationalizing the…

  9. Using a High-Resolution Global Climate Model to Simulate Extreme Extratropical Cyclones

    NASA Astrophysics Data System (ADS)

    Catalano, A. J.; Kapnick, S. B.; Broccoli, A. J.

    2015-12-01

    Extreme coastal storms devastate heavily populated areas around the world. Our understanding of exposure to extreme storms is limited due to the short duration of the observational record, which causes difficulty in assessing their true probability of occurrence. Global climate models provide a means of simulating a much larger sample of extreme events, allowing for better resolution of the tail of the distribution. Both tropical and extratropical cyclones (ETCs) occur over the northwestern Atlantic Ocean, and the risks associated with ETCs can be just as severe as those associated with tropical storms (e.g. high winds, storm surge). Therefore, we examine the ability of a high-resolution coupled atmosphere-ocean general circulation model (GFDL FLOR) to realistically simulate extreme ETCs in the northwestern Atlantic Ocean. We analyze similarities between results from a long (i.e. multi-century) FLOR simulation and several atmospheric reanalysis products. After considering differences in spatial and temporal resolution, results indicate that atmospheric measures of ETC intensity are comparable to those diagnosed from reanalyses. The full 1500-year simulation provides a higher frequency of the strongest intensity measures over the northwestern Atlantic Ocean compared with reanalyses. This illustrates that the larger number of realizations in the simulation provides a better opportunity to sample the tail of the ETC distribution. We further investigate the realism of simulated ETCs by using a tracking algorithm to conduct quantitative comparisons of feature, track, cyclogenesis, and cyclolysis densities of simulated ETC subsamples with storms from recent history (using reanalyses).

  10. Variable-resolution frameworks for the simulation of tropical cyclones in global atmospheric general circulation models

    NASA Astrophysics Data System (ADS)

    Zarzycki, Colin

    The ability of atmospheric General Circulation Models (GCMs) to resolve tropical cyclones in the climate system has traditionally been difficult. The challenges include adequately capturing storms which are small in size relative to model grids and the fact that key thermodynamic processes require a significant level of parameterization. At traditional GCM grid spacings of 50-300 km tropical cyclones are severely under-resolved, if not completely unresolved. This thesis explores a variable-resolution global model approach that allows for high spatial resolutions in areas of interest, such as low-latitude ocean basins where tropical cyclogenesis occurs. Such GCM designs with multi-resolution meshes serve to bridge the gap between globally-uniform grids and limited area models and have the potential to become a future tool for regional climate assessments. A statically-nested, variable-resolution option has recently been introduced into the Department of Energy/National Center for Atmospheric Research (DoE/NCAR) Community Atmosphere Model's (CAM) Spectral Element (SE) dynamical core. Using an idealized tropical cyclone test, variable-resolution meshes are shown to significantly lessen computational requirements in regional GCM studies. Furthermore, the tropical cyclone simulations are free of spurious numerical errors at the resolution interfaces. Utilizing aquaplanet simulations as an intermediate test between idealized simulations and fully-coupled climate model runs, climate statistics within refined patches are shown to be well-matched to globally-uniform simulations of the same grid spacing. Facets of the CAM version 4 (CAM4) subgrid physical parameterizations are likely too scale sensitive for variable-resolution applications, but the newer CAM5 package is vastly improved in performance at multiple grid spacings. Multi-decadal simulations following 'Atmospheric Model Intercomparison Project' protocols have been conducted with variable-resolution grids. Climate

  11. Creation and Global Deployment of a Mobile, Application-Based Cognitive Simulator for Cardiac Surgical Procedures.

    PubMed

    Brewer, Zachary E; Ogden, William David; Fann, James I; Burdon, Thomas A; Sheikh, Ahmad Y

    Several modern learning frameworks (eg, cognitive apprenticeship, anchored instruction, and situated cognition) posit the utility of nontraditional methods for effective experiential learning. Thus, development of novel educational tools emphasizing the cognitive framework of operative sequences may be of benefit to surgical trainees. We propose the development and global deployment of an effective, mobile cognitive cardiac surgical simulator. In methods, 16 preclinical medical students were assessed. Overall, 4 separate surgical modules (sternotomy, cannulation, decannulation, and sternal closure) were created utilizing the Touch Surgery (London, UK) platform. Modules were made available to download free of charge for use on mobile devices. Usage data were collected over a 6-month period. Educational efficacy of the modules was evaluated by randomizing a cohort of medical students to either module usage or traditional, reading-based self-study, followed by a multiple-choice learning assessment tool. In results, downloads of the simulator achieved global penetrance, with highest usage in the USA, Brazil, Italy, UK, and India. Overall, 5368 unique users conducted a total of 1971 hours of simulation. Evaluation of the medical student cohort revealed significantly higher assessment scores in those randomized to module use versus traditional reading (75% ± 9% vs 61% ± 7%, respectively; P < 0.05). In conclusion, this study represents the first effort to create a mobile, interactive cognitive simulator for cardiac surgery. Simulators of this type may be effective for the training and assessment of surgical students. We investigated whether an interactive, mobile-computing-based cognitive task simulator for cardiac surgery could be developed, deployed, and validated. Our findings suggest that such simulators may be a useful learning tool.

  12. Global MHD modeling of resonant ULF waves: Simulations with and without a plasmasphere.

    PubMed

    Claudepierre, S G; Toffoletto, F R; Wiltberger, M

    2016-01-01

    We investigate the plasmaspheric influence on the resonant mode coupling of magnetospheric ultralow frequency (ULF) waves using the Lyon-Fedder-Mobarry (LFM) global magnetohydrodynamic (MHD) model. We present results from two different versions of the model, both driven by the same solar wind conditions: one version that contains a plasmasphere (the LFM coupled to the Rice Convection Model, where the Gallagher plasmasphere model is also included) and another that does not (the stand-alone LFM). We find that the inclusion of a cold, dense plasmasphere has a significant impact on the nature of the simulated ULF waves. For example, the inclusion of a plasmasphere leads to a deeper (more earthward) penetration of the compressional (azimuthal) electric field fluctuations, due to a shift in the location of the wave turning points. Consequently, the locations where the compressional electric field oscillations resonantly couple their energy into local toroidal mode field line resonances also shift earthward. We also find, in both simulations, that higher-frequency compressional (azimuthal) electric field oscillations penetrate deeper than lower frequency oscillations. In addition, the compressional wave mode structure in the simulations is consistent with a radial standing wave oscillation pattern, characteristic of a resonant waveguide. The incorporation of a plasmasphere into the LFM global MHD model represents an advance in the state of the art in regard to ULF wave modeling with such simulations. We offer a brief discussion of the implications for radiation belt modeling techniques that use the electric and magnetic field outputs from global MHD simulations to drive particle dynamics.

  13. Global MHD modeling of resonant ULF waves: Simulations with and without a plasmasphere

    NASA Astrophysics Data System (ADS)

    Claudepierre, S. G.; Toffoletto, F. R.; Wiltberger, M.

    2016-01-01

    We investigate the plasmaspheric influence on the resonant mode coupling of magnetospheric ultralow frequency (ULF) waves using the Lyon-Fedder-Mobarry (LFM) global magnetohydrodynamic (MHD) model. We present results from two different versions of the model, both driven by the same solar wind conditions: one version that contains a plasmasphere (the LFM coupled to the Rice Convection Model, where the Gallagher plasmasphere model is also included) and another that does not (the stand-alone LFM). We find that the inclusion of a cold, dense plasmasphere has a significant impact on the nature of the simulated ULF waves. For example, the inclusion of a plasmasphere leads to a deeper (more earthward) penetration of the compressional (azimuthal) electric field fluctuations, due to a shift in the location of the wave turning points. Consequently, the locations where the compressional electric field oscillations resonantly couple their energy into local toroidal mode field line resonances also shift earthward. We also find, in both simulations, that higher-frequency compressional (azimuthal) electric field oscillations penetrate deeper than lower frequency oscillations. In addition, the compressional wave mode structure in the simulations is consistent with a radial standing wave oscillation pattern, characteristic of a resonant waveguide. The incorporation of a plasmasphere into the LFM global MHD model represents an advance in the state of the art in regard to ULF wave modeling with such simulations. We offer a brief discussion of the implications for radiation belt modeling techniques that use the electric and magnetic field outputs from global MHD simulations to drive particle dynamics.

  14. Effects of data assimilation on the global aerosol key optical properties simulations

    NASA Astrophysics Data System (ADS)

    Yin, Xiaomei; Dai, Tie; Schutgens, Nick A. J.; Goto, Daisuke; Nakajima, Teruyuki; Shi, Guangyu

    2016-09-01

    We present the one month results of global aerosol optical properties for April 2006, using the Spectral Radiation Transport Model for Aerosol Species (SPRINTARS) coupled with the Non-hydrostatic ICosahedral Atmospheric Model (NICAM), by assimilating Moderate Resolution Imaging Spectroradiometer (MODIS) aerosol optical depth (AOD) with Local Ensemble Transform Kalman Filter (LETKF). The simulated AOD, Ångström Exponent (AE) and single scattering albedo (SSA) are validated by independent Aerosol Robotic Network (AERONET) observations over the global sites. The data assimilation has the strongest positive effect on the AOD simulation and slight positive influences on the AE and SSA simulations. For the time-averaged globally spatial distribution, the data assimilation increases the model skill score (S) of AOD, AE, and SSA from 0.55, 0.92, and 0.75 to 0.79, 0.94, and 0.80, respectively. Over the North Africa (NAF) and Middle East region where the aerosol composition is simple (mainly dust), the simulated AODs are best improved by the data assimilation, indicating the assimilation correctly modifies the wrong dust burdens caused by the uncertainties of the dust emission parameterization. Assimilation also improves the simulation of the temporal variations of the aerosol optical properties over the AERONET sites, with improved S at 60 (62%), 45 (55%) and 11 (50%) of 97, 82 and 22 sites for AOD, AE and SSA. By analyzing AOD and AE at five selected sites with best S improvement, this study further indicates that the assimilation can reproduce short duration events and ratios between fine and coarse aerosols more accurately.

  15. Toolbox for Urban Mobility Simulation: High Resolution Population Dynamics for Global Cities

    NASA Astrophysics Data System (ADS)

    Bhaduri, B. L.; Lu, W.; Liu, C.; Thakur, G.; Karthik, R.

    2015-12-01

    In this rapidly urbanizing world, unprecedented rate of population growth is not only mirrored by increasing demand for energy, food, water, and other natural resources, but has detrimental impacts on environmental and human security. Transportation simulations are frequently used for mobility assessment in urban planning, traffic operation, and emergency management. Previous research, involving purely analytical techniques to simulations capturing behavior, has investigated questions and scenarios regarding the relationships among energy, emissions, air quality, and transportation. Primary limitations of past attempts have been availability of input data, useful "energy and behavior focused" models, validation data, and adequate computational capability that allows adequate understanding of the interdependencies of our transportation system. With increasing availability and quality of traditional and crowdsourced data, we have utilized the OpenStreetMap roads network, and has integrated high resolution population data with traffic simulation to create a Toolbox for Urban Mobility Simulations (TUMS) at global scale. TUMS consists of three major components: data processing, traffic simulation models, and Internet-based visualizations. It integrates OpenStreetMap, LandScanTM population, and other open data (Census Transportation Planning Products, National household Travel Survey, etc.) to generate both normal traffic operation and emergency evacuation scenarios. TUMS integrates TRANSIMS and MITSIM as traffic simulation engines, which are open-source and widely-accepted for scalable traffic simulations. Consistent data and simulation platform allows quick adaption to various geographic areas that has been demonstrated for multiple cities across the world. We are combining the strengths of geospatial data sciences, high performance simulations, transportation planning, and emissions, vehicle and energy technology development to design and develop a simulation

  16. Numerical simulation of global temperature change during the 20th century with the IAP/LASG GOALS model

    NASA Astrophysics Data System (ADS)

    Ma, Xiaoyan; Guo, Yufu; Shi, Guangyu; Yu, Yongqiang

    2004-04-01

    The IAP/LASG GOALS coupled model is used to simulate the climate change during the 20th century using historical greenhouse gases concentrations, the mass mixing ratio of sulfate aerosols simulated by a CTM model, and reconstruction of solar variability spanning the period 1900 to 1997. Four simulations, including a control simulation and three forcing simulations, are conducted. Comparison with the observational record for the period indicates that the three forcing experiments simulate reasonable temporal and spatial distributions of the temperature change. The global warming during the 20th century is caused mainly by increasing greenhouse gas concentration especially since the late 1980s; sulfate aerosols offset a portion of the global warming and the reduction of global temperature is up to about 0.11°C over the century; additionally, the effect of solar variability is not negligible in the simulation of climate change over the 20th century.

  17. Assessment of extreme precipitation events over Amazon simulated by global climate models from HIGEM family

    NASA Astrophysics Data System (ADS)

    Custodio, M. D. S.; Ambrizzi, T.; Da Rocha, R.

    2015-12-01

    The increased horizontal resolution of climate models aims to improve the simulations accuracy and to understand the non-linear processes during interactions between different spatial scales within the climate system. Up to this moment, these interactions did not have a good representation on low horizontal resolution GCMs. The variations of extreme climatic events had been described and analyzed in the scientific literature. In a scenario of global warming it is necessary understanding and explaining extreme events and to know if global models may represent these events. The purpose of this study was to understand the impact of the horizontal resolution in high resolution coupled and atmospheric global models of HiGEM project in simulating atmospheric patterns and processes of interaction between spatial scales. Moreover, evaluate the performance of coupled and uncoupled versions of the High-Resolution Global Environmental Model in capturing the signal of interannual and intraseasonal variability of precipitation over Amazon region. The results indicated that the grid refinement and ocean-atmosphere coupling contributes to a better representation of seasonal patterns, both precipitation and temperature, on the Amazon region. Besides, the climatic models analyzed represent better than other models (regional and global) the climatic characteristics of this region. This indicates a breakthrough in the development of high resolution climate models. Both coupled and uncoupled models capture the observed signal of the ENSO and MJO oscillations, although with reversed phase in some cases. The interannual variability analysis showed that coupled simulations intensify the impact of the ENSO in the Amazon. In the intraseasonal scale, although the simulations intensify this signal, the coupled models present larger similarities with observations than the atmospheric models for the extremes of precipitation. The simulation of ENSO in GCMs can be attributed to their high

  18. The Building: An Adaptation of Francis Debyser's Writing Project. A Global Simulation To Teach Language and Culture.

    ERIC Educational Resources Information Center

    Magnin, Michele Claude

    A "global simulation" is a class activity allowing students to encounter situations that include love, life, and death in a simulated environment. This paper describes several possible simulations. Each one can be integrated into a variety of intermediate- to advanced-level curricula such as a conversation class, a culture and civilization class,…

  19. Numerical simulation of global hydro-dynamics in a pulsatile bioreactor for cardiovascular tissue engineering.

    PubMed

    Shi, Yubing

    2008-01-01

    Previous numerical simulations of the hydro-dynamic response in the various bioreactor designs were mostly concentrated on the local flow field analysis using computational fluid dynamics, which cannot provide the global hydro-dynamics information to assist the bioreactor design. In this research, a mathematical model is developed to simulate the global hydro-dynamic changes in a pulsatile bioreactor design by considering the flow resistance, the elasticity of the vessel and the inertial effect of the media fluid in different parts of the system. The developed model is used to study the system dynamic response in a typical pulsatile bioreactor design for the culturing of cardiovascular tissues. Simulation results reveal the detailed pressure and flow-rate changes in the different positions of the bioreactor, which are very useful for the evaluation of hydro-dynamic performance in the bioreactor designed. Typical pressure and flow-rate changes simulated agree well with the published experimental data, thus validates the mathematical model developed. The proposed mathematical model can be used for design optimization of other pulsatile bioreactors that work under different experimental conditions and have different system configurations.

  20. BUOYANT MAGNETIC LOOPS IN A GLOBAL DYNAMO SIMULATION OF A YOUNG SUN

    SciTech Connect

    Nelson, Nicholas J.; Toomre, Juri; Brown, Benjamin P.; Brun, Allan Sacha

    2011-10-01

    The current dynamo paradigm for the Sun and Sun-like stars places the generation site for strong toroidal magnetic structures deep in the solar interior. Sunspots and starspots on Sun-like stars are believed to arise when sections of these magnetic structures become buoyantly unstable and rise from the deep interior to the photosphere. Here, we present the first three-dimensional global magnetohydrodynamic (MHD) simulation in which turbulent convection, stratification, and rotation combine to yield a dynamo that self-consistently generates buoyant magnetic loops. We simulate stellar convection and dynamo action in a spherical shell with solar stratification, but rotating three times faster than the current solar rate. Strong wreaths of toroidal magnetic field are realized by dynamo action in the convection zone. By turning to a dynamic Smagorinsky model for subgrid-scale turbulence, we here attain considerably reduced diffusion in our simulation. This permits the regions of strongest magnetic field in these wreaths to rise toward the top of the convection zone via a combination of magnetic buoyancy instabilities and advection by convective giant cells. Such a global simulation yielding buoyant loops represents a significant step forward in combining numerical models of dynamo action and flux emergence.

  1. Evaluation of rainfall simulations over West Africa in dynamically downscaled CMIP5 global circulation models

    NASA Astrophysics Data System (ADS)

    Akinsanola, A. A.; Ajayi, V. O.; Adejare, A. T.; Adeyeri, O. E.; Gbode, I. E.; Ogunjobi, K. O.; Nikulin, G.; Abolude, A. T.

    2017-03-01

    This study presents evaluation of the ability of Rossby Centre Regional Climate Model (RCA4) driven by nine global circulation models (GCMs), to skilfully reproduce the key features of rainfall climatology over West Africa for the period of 1980-2005. The seasonal climatology and annual cycle of the RCA4 simulations were assessed over three homogenous subregions of West Africa (Guinea coast, Savannah, and Sahel) and evaluated using observed precipitation data from the Global Precipitation Climatology Project (GPCP). Furthermore, the model output was evaluated using a wide range of statistical measures. The interseasonal and interannual variability of the RCA4 were further assessed over the subregions and the whole of the West Africa domain. Results indicate that the RCA4 captures the spatial and interseasonal rainfall pattern adequately but exhibits a weak performance over the Guinea coast. Findings from the interannual rainfall variability indicate that the model performance is better over the larger West Africa domain than the subregions. The largest difference across the RCA4 simulated annual rainfall was found in the Sahel. Result from the Mann-Kendall test showed no significant trend for the 1980-2005 period in annual rainfall either in GPCP observation data or in the model simulations over West Africa. In many aspects, the RCA4 simulation driven by the HadGEM2-ES perform best over the region. The use of the multimodel ensemble mean has resulted to the improved representation of rainfall characteristics over the study domain.

  2. Modeling of substorm development with a kinematic effect by the global MHD simulations

    NASA Astrophysics Data System (ADS)

    den, Mitsue; Fujita, Shigeru; Tanaka, Takashi; Horiuchi, Ritoku

    Magnetic reconnection is considered to play an important role in space phenomena such as substorm in the Earth's magnetosphere. Recently, Tanaka and Fujita reproduced substorm evoution process by numerical simulation with the global MHD code. In the MHD framework, the dissipation model is used for modeling of the kinetic effects. They found that the normalized reconnection viscosity, one of the dessipation model employed there, gave a large effect for the substorm development though that viscosity was assumed to be a constant parameter. It is well known that magnetric reconnection is controlled by microscopic kinetic mechanism. Horiuchi et al. investigated the roles of microscopic plasma instabilities on the violation of the frozen-in condition by examining the force balance equation based on explicit electromagnetic particle simulation for an ion-scale current sheet, and concluded that the growth of drift kink instability can create anomalous resistivity leading to the excitation of collisionless reconnection. They estimated the effective resistivity based on the particle simulation data. In this paper, we perform substorm simulation by using the global MHD code with this anomalous resistivity obtained in their microscopic approach istead of the emprical resistivity model, and investigate the relationship between the substorm development and the anomalous resistivity model.

  3. Uncertainty in soil data can outweigh climate impact signals in global crop yield simulations

    PubMed Central

    Folberth, Christian; Skalský, Rastislav; Moltchanova, Elena; Balkovič, Juraj; Azevedo, Ligia B.; Obersteiner, Michael; van der Velde, Marijn

    2016-01-01

    Global gridded crop models (GGCMs) are increasingly used for agro-environmental assessments and estimates of climate change impacts on food production. Recently, the influence of climate data and weather variability on GGCM outcomes has come under detailed scrutiny, unlike the influence of soil data. Here we compare yield variability caused by the soil type selected for GGCM simulations to weather-induced yield variability. Without fertilizer application, soil-type-related yield variability generally outweighs the simulated inter-annual variability in yield due to weather. Increasing applications of fertilizer and irrigation reduce this variability until it is practically negligible. Importantly, estimated climate change effects on yield can be either negative or positive depending on the chosen soil type. Soils thus have the capacity to either buffer or amplify these impacts. Our findings call for improvements in soil data available for crop modelling and more explicit accounting for soil variability in GGCM simulations. PMID:27323866

  4. How much complexity is needed in global model organic aerosol simulations?

    NASA Astrophysics Data System (ADS)

    Tsigaridis, K.; Daskalakis, N.; Kanakidou, M.

    2014-12-01

    The skill in simulating the global atmospheric distribution and fate of organic aerosols (OA) of thirty-one global chemistry/transport and general circulation models of various complexities will be presented. Significant differences between models are identified in the magnitude of primary emissions, secondary OA (SOA) formation, the number of OA species used, the complexity of OA parameterizations (gas-particle partitioning, chemical aging, multiphase chemistry, aerosol microphysics), and the OA physical, chemical and optical properties. The diversity of the global OA simulation results has increased since earlier AeroCom experiments, mainly due to the increasing complexity of the SOA parameterization in models, and the implementation of new, highly uncertain, OA sources. Diversity of over an order of magnitude exists in the modeled vertical distribution of OA concentrations pointing to uncertainties in the parameterization of the semi-volatile character of OA and its temperature dependence, as well as OA long-range transport. Fine aerosol organic carbon (OC) and OA observations from continuous monitoring networks and individual field campaigns have been used for model evaluation. Τhe combined model/measurements analysis suggests the existence of increased OA levels during summer due to biogenic SOA formation over large areas of the USA that can be of the same order of magnitude as the POA, even at urban locations, and contribute to the observed urban seasonal pattern. The global models are able to simulate the high secondary character of OA observed in the atmosphere as a result of SOA formation and of POA aging, although, the amount of OA present in the atmosphere remains largely underestimated. The models skill with increasing model complexity with regard to OC or OA mass concentration will be presented and thoroughly discussed. This work is part of AeroCom phase II.

  5. Simulation of the Universal-Time Diurnal Variation of the Global Electric Circuit Charging Rate

    NASA Technical Reports Server (NTRS)

    Mackerras, David; Darveniza, Mat; Orville, Richard E.; Williams, Earle R.; Goodman, Steven J.

    1999-01-01

    A global lightning model that includes diurnal and annual lightning variation, and total flash density versus latitude for each major land and ocean, has been used as the basis for simulating the global electric circuit charging rate. A particular objective has been to reconcile the difference in amplitude ratios [AR=(max-min)/mean] between global lightning diurnal variation (AR approximately equals 0.8) and the diurnal variation of typical atmospheric potential gradient curves (AR approximately equals 0.35). A constraint on the simulation is that the annual mean charging current should be about 1000 A. The global lightning model shows that negative ground flashes can contribute, at most, about 10-15% of the required current. For the purpose of the charging rate simulation, it was assumed that each ground flash contributes 5 C to the charging process. It was necessary to assume that all electrified clouds contribute to charging by means other than lightning, that the total flash rate can serve as an indirect indicator of the rate of charge transfer, and that oceanic electrified clouds contribute to charging even though they are relatively inefficient in producing lightning. It was also found necessary to add a diurnally invariant charging current component. By trial and error it was found that charging rate diurnal variation curves could be produced with amplitude ratios and general shapes similar to those of the potential gradient diurnal variation curves measured over ocean and arctic regions during voyages of the Carnegie Institute research vessels. The comparisons were made for the northern winter (Nov.-Feb.), the equinox (Mar., Apr., Sept., Oct.), the northern summer (May-Aug.), and the whole year.

  6. Simulation of variability in atmospheric carbon dioxide using a global coupled Eulerian - Lagrangian transport model

    NASA Astrophysics Data System (ADS)

    Koyama, Y.; Maksyutov, S.; Mukai, H.; Thoning, K.; Tans, P.

    2011-04-01

    This study assesses the advantages of using a coupled atmospheric-tracer transport model, comprising a global Eulerian model and a global Lagrangian particle dispersion model, to improve the reproducibility of tracer-gas variations affected by the near-field surface emissions and transport around observation sites. The ability to resolve variability in atmospheric composition on an hourly time-scale and a spatial scale of several kilometers would be beneficial for analyzing data from continuous ground-based monitoring and from upcoming space-based observations. The coupled model yields an increase in the horizontal resolution of transport and fluxes, and has been tested in regional-scale studies of atmospheric chemistry. By applying the Lagrangian component to the global domain, we extend this approach to the global scale, thereby enabling computationally efficient global inverse modeling and data assimilation. To validate the coupled model, we compare model-simulated CO2 concentrations with continuous observations at three sites: two operated by the National Oceanic and Atmospheric Administration, USA, and one operated by the National Institute for Environmental Studies, Japan. As the goal of this study is limited to introducing the new modeling approach, we selected a transport simulation at these three sites to demonstrate how the model may perform at various geographical areas. The coupled model provides improved agreement between modeled and observed CO2 concentrations in comparison to the Eulerian model. In an area where variability in CO2 concentration is dominated by a fossil fuel signal, the correlation coefficient between modeled and observed concentrations increases by between 0.05 to 0.1 from the original values of 0.5-0.6 achieved with the Eulerian model.

  7. The Ozone Budget in the Upper Troposphere from Global Modeling Initiative (GMI)Simulations

    NASA Technical Reports Server (NTRS)

    Rodriquez, J.; Duncan, Bryan N.; Logan, Jennifer A.

    2006-01-01

    Ozone concentrations in the upper troposphere are influenced by in-situ production, long-range tropospheric transport, and influx of stratospheric ozone, as well as by photochemical removal. Since ozone is an important greenhouse gas in this region, it is particularly important to understand how it will respond to changes in anthropogenic emissions and changes in stratospheric ozone fluxes.. This response will be determined by the relative balance of the different production, loss and transport processes. Ozone concentrations calculated by models will differ depending on the adopted meteorological fields, their chemical scheme, anthropogenic emissions, and treatment of the stratospheric influx. We performed simulations using the chemical-transport model from the Global Modeling Initiative (GMI) with meteorological fields from (It)h e NASA Goddard Institute for Space Studies (GISS) general circulation model (GCM), (2) the atmospheric GCM from NASA's Global Modeling and Assimilation Office(GMAO), and (3) assimilated winds from GMAO . These simulations adopt the same chemical mechanism and emissions, and adopt the Synthetic Ozone (SYNOZ) approach for treating the influx of stratospheric ozone -. In addition, we also performed simulations for a coupled troposphere-stratosphere model with a subset of the same winds. Simulations were done for both 4degx5deg and 2degx2.5deg resolution. Model results are being tested through comparison with a suite of atmospheric observations. In this presentation, we diagnose the ozone budget in the upper troposphere utilizing the suite of GMI simulations, to address the sensitivity of this budget to: a) the different meteorological fields used; b) the adoption of the SYNOZ boundary condition versus inclusion of a full stratosphere; c) model horizontal resolution. Model results are compared to observations to determine biases in particular simulations; by examining these comparisons in conjunction with the derived budgets, we may pinpoint

  8. Padé approximation of the adiabatic electron contribution to the gyrokinetic quasi-neutrality equation in the ORB5 code

    NASA Astrophysics Data System (ADS)

    Lanti, E.; Dominski, J.; Brunner, S.; McMillan, B. F.; Villard, L.

    2016-11-01

    This work aims at completing the implementation of a solver for the quasineutrality equation using a Padé approximation in the global gyrokinetic code ORB5. Initially [Dominski, Ph.D. thesis, 2016], the Pade approximation was only implemented for the kinetic electron model. To enable runs with adiabatic or hybrid electron models while using a Pade approximation to the polarization response, the adiabatic response term of the quasi-neutrality equation must be consistently modified. It is shown that the Pade solver is in good agreement with the arbitrary wavelength solver of ORB5 [Dominski, Ph.D. thesis, 2016]. To perform this verification, the linear dispersion relation of an ITG-TEM transition is computed for both solvers and the linear growth rates and frequencies are compared.

  9. Short-term Climate Simulations of African Easterly Waves with a Global Mesoscale Model

    NASA Astrophysics Data System (ADS)

    Shen, B. W.

    2015-12-01

    Recent high-resolution global model simulations ( Shen et al., 2010a, 2010b, 2012; 2013), which were conducted to examine the role of multiscale processes associated with tropical waves in the predictability of mesoscale tropical cyclones (TCs), suggested that a large-scale system (e.g., tropical waves) can provide determinism on the prediction of TC genesis, making it possible to extend the lead time of genesis predictions. Selected cases include the relationship between (i) TC Nargis (2008) and an Equatorial Rossby wave; (ii) Hurricane Helene (2006) and an intensifying African Easterly Wave (AEW); (iii) Twin TCs (2002) and a mixed Rossby-gravity wave during an active phase of the Madden Julian Oscillation (MJO); (iv) Hurricane Sandy (2012) and tropical waves during an active phase of the MJO. In this talk, thirty-day simulations with different model configurations are presented to examine the model's ability to simulate AEWs and MJOs and their association with tropical cyclogenesis. I will first discuss the simulations of the initiation and propagation of 6 consecutive AEWs in late August 2006 and the mean state of the African easterly jet (AEJ) over both Africa and downstream in the tropical Atlantic. By comparing our simulations with NCEP analysis and satellite data (e.g., TRMM), it is shown that the statistical characteristics of individual AEWs are realistically simulated with larger errors in the 5th and th AEWs. Results from the sensitivity experiments suggest the following: 1) accurate representations of non-linear interactions between the atmosphere and land processes are crucial for improving the simulations of the AEWs and the AEJ; 2) improved simulations of an individual AEW and its interaction with local environments (e.g., the Guinea Highlands) could provide determinism for hurricane formation downstream. Of interest is the potential to extend the lead time for predicting hurricane formation (e.g., a lead time of up to 22 days) as the 4th AEW is

  10. Verification of particle simulation of radio frequency waves in fusion plasmas

    SciTech Connect

    Kuley, Animesh; Lin, Z.; Wang, Z. X.; Wessel, F.

    2013-10-15

    Radio frequency (RF) waves can provide heating, current and flow drive, as well as instability control for steady state operations of fusion experiments. A particle simulation model has been developed in this work to provide a first-principles tool for studying the RF nonlinear interactions with plasmas. In this model, ions are considered as fully kinetic particles using the Vlasov equation and electrons are treated as guiding centers using the drift kinetic equation. This model has been implemented in a global gyrokinetic toroidal code using real electron-to-ion mass ratio. To verify the model, linear simulations of ion plasma oscillation, ion Bernstein wave, and lower hybrid wave are carried out in cylindrical geometry and found to agree well with analytic predictions.

  11. Microbial response to simulated global change is phylogenetically conserved and linked with functional potential.

    PubMed

    Amend, Anthony S; Martiny, Adam C; Allison, Steven D; Berlemont, Renaud; Goulden, Michael L; Lu, Ying; Treseder, Kathleen K; Weihe, Claudia; Martiny, Jennifer B H

    2016-01-01

    The high diversity of microbial communities hampers predictions about their responses to global change. Here we investigate the potential for using a phylogenetic, trait-based framework to capture the response of bacteria and fungi to global change manipulations. Replicated grassland plots were subjected to 3+ years of drought and nitrogen fertilization. The responses of leaf litter bacteria and fungi to these simulated changes were significantly phylogenetically conserved. Proportional changes in abundance were highly correlated among related organisms, such that relatives with approximately 5% ribosomal DNA genetic distance showed similar responses to the treatments. A microbe's change in relative abundance was significantly correlated between the treatments, suggesting a compromise between numerical abundance in undisturbed environments and resistance to change in general, independent of disturbance type. Lineages in which at least 90% of the microbes shared the same response were circumscribed at a modest phylogenetic depth (τD 0.014-0.021), but significantly larger than randomized simulations predict. In several clades, phylogenetic depth of trait consensus was higher. Fungal response to drought was more conserved than was response to nitrogen fertilization, whereas bacteria responded equally to both treatments. Finally, we show that a bacterium's response to the manipulations is correlated with its potential functional traits (measured here as the number of glycoside hydrolase genes encoding the capacity to degrade different types of carbohydrates). Together, these results suggest that a phylogenetic, trait-based framework may be useful for predicting shifts in microbial composition and functioning in the face of global change.

  12. Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping.

    PubMed

    Zhao, Mengxin; Xue, Kai; Wang, Feng; Liu, Shanshan; Bai, Shijie; Sun, Bo; Zhou, Jizhong; Yang, Yunfeng

    2014-10-01

    Despite microbes' key roles in driving biogeochemical cycles, the mechanism of microbe-mediated feedbacks to global changes remains elusive. Recently, soil transplant has been successfully established as a proxy to simulate climate changes, as the current trend of global warming coherently causes range shifts toward higher latitudes. Four years after southward soil transplant over large transects in China, we found that microbial functional diversity was increased, in addition to concurrent changes in microbial biomass, soil nutrient content and functional processes involved in the nitrogen cycle. However, soil transplant effects could be overridden by maize cropping, which was attributed to a negative interaction. Strikingly, abundances of nitrogen and carbon cycle genes were increased by these field experiments simulating global change, coinciding with higher soil nitrification potential and carbon dioxide (CO2) efflux. Further investigation revealed strong correlations between carbon cycle genes and CO2 efflux in bare soil but not cropped soil, and between nitrogen cycle genes and nitrification. These findings suggest that changes of soil carbon and nitrogen cycles by soil transplant and cropping were predictable by measuring microbial functional potentials, contributing to a better mechanistic understanding of these soil functional processes and suggesting a potential to incorporate microbial communities in greenhouse gas emission modeling.

  13. Simulation and Observation of Global Atmospheric CO2 from 2009-2010

    NASA Astrophysics Data System (ADS)

    Denning, A.; O'Dell, C. W.; Baker, D. F.; Parazoo, N.; McKeown, R.; Baker, I. T.; Kawa, S. R.; Doney, S. C.

    2011-12-01

    We compare global variations in atmospheric CO2 concentrations using a comprehensive model of surface carbon cycling and atmospheric transport to retrievals of column CO2 mole fraction from near-infrared spectroscopy from the GOSAT mission. Surface carbon exchanges due to photosynthesis, respiration, decomposition, biomass burning, fossil fuel combustion, and air-sea gas exchange are computed every hour. These fluxes are used as input to a global atmospheric tranport model to obtain three-dimensional fields of CO2, which are sampled at the time and location of quality-screened GOSAT data retrieved by the Atmospheric Carbon Observations from Space (ACOS) team. The system is operated on a 0.5° x 0.67° grid (dx ~ 50 km), providing global mesoscale coverage, and has good skill at replicating diurnal, synoptic, and seasonal variations over vegetated land surfaces. It is driven by meteorological output from the NASA Goddard EOS Data Assimilation System. Surface weather from the system drives calculations of terrestrial ecosystem metabolism (radiation, precipitation, humidity, temperature) and air-sea gas exchange (wind), with other input data coming from satellite data products. Simulated spatial patterns and seasonal variations of simulated and observed column CO2 exhibit broad agreement, but some offsets in latitude and seasonal variations are noted. These are attributed to both model and satellite retrieval errors.

  14. Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping

    PubMed Central

    Zhao, Mengxin; Xue, Kai; Wang, Feng; Liu, Shanshan; Bai, Shijie; Sun, Bo; Zhou, Jizhong; Yang, Yunfeng

    2014-01-01

    Despite microbes' key roles in driving biogeochemical cycles, the mechanism of microbe-mediated feedbacks to global changes remains elusive. Recently, soil transplant has been successfully established as a proxy to simulate climate changes, as the current trend of global warming coherently causes range shifts toward higher latitudes. Four years after southward soil transplant over large transects in China, we found that microbial functional diversity was increased, in addition to concurrent changes in microbial biomass, soil nutrient content and functional processes involved in the nitrogen cycle. However, soil transplant effects could be overridden by maize cropping, which was attributed to a negative interaction. Strikingly, abundances of nitrogen and carbon cycle genes were increased by these field experiments simulating global change, coinciding with higher soil nitrification potential and carbon dioxide (CO2) efflux. Further investigation revealed strong correlations between carbon cycle genes and CO2 efflux in bare soil but not cropped soil, and between nitrogen cycle genes and nitrification. These findings suggest that changes of soil carbon and nitrogen cycles by soil transplant and cropping were predictable by measuring microbial functional potentials, contributing to a better mechanistic understanding of these soil functional processes and suggesting a potential to incorporate microbial communities in greenhouse gas emission modeling. PMID:24694714

  15. Kelvin-Helmholtz instability during northward IMF conditions: Global 3-Dimensional MHD simulations (Invited)

    NASA Astrophysics Data System (ADS)

    Merkin, V. G.; Lyon, J.; Claudepierre, S. G.

    2013-12-01

    The Kelvin-Helmholtz Instability (KHI) has long been suggested to operate on the magnetospheric boundary, where the magnetosheath plasma streams past the magnetosphere. The instability is thought to be responsible for inducing various wave populations in the magnetosphere and for mass, momentum and energy transport across the magnetospheric boundary. Waves attributed to the KHI have been observed at the Earth's magnetosphere flanks as well as at Saturn and Mercury during spacecraft crossings, and remotely at boundaries of Coronal Mass Ejections (CMEs). Recent high-resolution global 3D magnetohydrodynamic (MHD) simulations of the magnetosphere confirm the existence of pronounced perturbations of the magnetospheric boundary, which are thought to be due to KHI. Such global simulations had been challenging in the past because of the need to encompass the entire magnetosphere, while sufficiently resolving the boundary layer. Here we present results of such a high-resolution simulation of the magnetosphere, using the Lyon-Fedder-Mobarry (LFM) model, under steady northward Interplanetary Magnetic Field (IMF) conditions. We find the magnetospheric boundary to be globally unstable, including the high-latitude boundary layer (meridional plane), where magnetic tension is apparently not sufficient to stabilize the growth of oscillations. Roughly beyond the terminator, global modes, coupled into the surface modes, become apparent, so that the entire body of the magnetosphere is engaged in an oscillatory motion. The wave vector of the surface oscillations has a component perpendicular to the background flow and tangential to the shear layer (in the equatorial plane, k_z component of the wave vector), which is consistent with the generation of field-aligned currents that flow on closed field lines between the inner portion of the boundary layer and the ionosphere. We calculate the distribution of wave power in the equatorial plane and find it consistent with the existence of a

  16. Ionospheric Simulation System for Satellite Observations and Global Assimilative Model Experiments - ISOGAME

    NASA Technical Reports Server (NTRS)

    Pi, Xiaoqing; Mannucci, Anthony J.; Verkhoglyadova, Olga; Stephens, Philip; Iijima, Bryron A.

    2013-01-01

    Modeling and imaging the Earth's ionosphere as well as understanding its structures, inhomogeneities, and disturbances is a key part of NASA's Heliophysics Directorate science roadmap. This invention provides a design tool for scientific missions focused on the ionosphere. It is a scientifically important and technologically challenging task to assess the impact of a new observation system quantitatively on our capability of imaging and modeling the ionosphere. This question is often raised whenever a new satellite system is proposed, a new type of data is emerging, or a new modeling technique is developed. The proposed constellation would be part of a new observation system with more low-Earth orbiters tracking more radio occultation signals broadcast by Global Navigation Satellite System (GNSS) than those offered by the current GPS and COSMIC observation system. A simulation system was developed to fulfill this task. The system is composed of a suite of software that combines the Global Assimilative Ionospheric Model (GAIM) including first-principles and empirical ionospheric models, a multiple- dipole geomagnetic field model, data assimilation modules, observation simulator, visualization software, and orbit design, simulation, and optimization software.

  17. A new satellite simulator tool for global model-measurements intercomparisons

    NASA Astrophysics Data System (ADS)

    Khlystova, Iryna; Schreier, Mathias; Bovensmann, Heinrich; Sausen, Robert; Burrows, John P.

    A new satellite simulation tool has been developed at the University of Bremen in cooperation with the DLR IPA in Muenchen. The original objective of this tool was to simplify and unify all typical comparison steps performed repeatedly by different research groups for comparisons of the global measurements of an atmospheric trace species with corresponding model fields. To answer the main requirements, the SatSim tool was designed as an extendable (based on concepts of Object-Oriented Programming) and flexible relative to the format of the input data tool. The latter allows the integration of the SatSim into a chemistry-transport model facility as a post-processing routine as well as its independent usage. Additionally, as it has become clear through the development process, SatSim can be also used as a validation tool for different satellite measurements. Being independent of the retrieval procedure, which is required in order to obtain a trace-species information from satellites radiometric measurements, this tool allows comparisons of the modelled fields of several atmospheric trace species as if they were measured by satellite instruments. Such approach provides an insight into the differences of the instrumental measurement precision caused only by the difference in the ground tracks geometry and related differences in the cloud coverage of the observed scenes. An example of the simulated SCIAMACHY and MOPITT CO observations based on the ECHAM5/Messy1 simulated global CO fields will be presented.

  18. Laboratory test simulation for non-flat response calibration of global Earth albedo monitor

    NASA Astrophysics Data System (ADS)

    Seong, Sehyun; Kim, Sug-Whan; Ryu, Dongok; Hong, Jinsuk; Lockwood, Mike

    2012-09-01

    In this report, we present laboratory test simulation for directional responsivity of a global Earth albedo monitoring instrument. The sensor is to observe the Sun and the Earth, alternately, and measure their shortwave (<4μm) radiations around the L1 halo orbit to obtain global Earth albedo. The instrument consists of a broadband scanning radiometer (energy channel instrument) and an imager (visible channel instrument) with ±2° field-of-view. In the case of the energy channel instrument, radiations arriving at the viewing ports from the Sun and the Earth are directed toward the pyroelectric detector via two spherical folding mirrors and a 3D compound parabolic concentrator (CPC). The instrument responsivity is defined by the ratio of the incident radiation input to the instrument output signal. The radiometer's relative directional responsivity needs to be characterized across the field-of-view to assist output signal calibration. For the laboratory test, the distant small source configuration consists of an off-axis collimator and the instrument with adjustable mounts. Using reconstructed 3D CPC surface, the laboratory test simulation for predicting the instrument directional responsivity was conducted by a radiative transfer computation with ray tracing technique. The technical details of the laboratory test simulation are presented together with future plan.

  19. Mechanism of ENSO influence on the South Asian monsoon rainfall in global model simulations

    NASA Astrophysics Data System (ADS)

    Joshi, Sneh; Kar, Sarat C.

    2017-02-01

    Coupled ocean atmosphere global climate models are increasingly being used for seasonal scale simulation of the South Asian monsoon. In these models, sea surface temperatures (SSTs) evolve as coupled air-sea interaction process. However, sensitivity experiments with various SST forcing can only be done in an atmosphere-only model. In this study, the Global Forecast System (GFS) model at T126 horizontal resolution has been used to examine the mechanism of El Niño-Southern Oscillation (ENSO) forcing on the monsoon circulation and rainfall. The model has been integrated (ensemble) with observed, climatological and ENSO SST forcing to document the mechanism on how the South Asian monsoon responds to basin-wide SST variations in the Indian and Pacific Oceans. The model simulations indicate that the internal variability gets modulated by the SSTs with warming in the Pacific enhancing the ensemble spread over the monsoon region as compared to cooling conditions. Anomalous easterly wind anomalies cover the Indian region both at 850 and 200 hPa levels during El Niño years. The locations and intensity of Walker and Hadley circulations are altered due to ENSO SST forcing. These lead to reduction of monsoon rainfall over most parts of India during El Niño events compared to La Niña conditions. However, internally generated variability is a major source of uncertainty in the model-simulated climate.

  20. Projected changes in atmospheric river events in Arizona as simulated by global and regional climate models

    NASA Astrophysics Data System (ADS)

    Rivera, Erick R.; Dominguez, Francina

    2016-09-01

    Inland-penetrating atmospheric rivers (ARs) affect the United States Southwest and significantly contribute to cool season precipitation. In this study, we examine the results from an ensemble of dynamically downscaled simulations from the North American Regional Climate Change Assessment Program (NARCCAP) and their driving general circulation models (GCMs) in order to determine statistically significant changes in the intensity of the cool season ARs impacting Arizona and the associated precipitation. Future greenhouse gas emissions follow the A2 emission scenario from the Intergovernmental Panel on Climate Change Fourth Assessment Report simulations. We find that there is a consistent and clear intensification of the AR-related water vapor transport in both the global and regional simulations which reflects the increase in water vapor content due to warmer atmospheric temperatures, according to the Clausius-Clapeyron relationship. However, the response of AR-related precipitation intensity to increased moisture flux and column-integrated water vapor is weak and no significant changes are projected either by the GCMs or the NARCCAP models. This lack of robust precipitation variations can be explained in part by the absence of meaningful changes in both the large-scale water vapor flux convergence and the maximum positive relative vorticity in the GCMs. Additionally, some global models show a robust decrease in relative humidity which may also be responsible for the projected precipitation patterns.

  1. Evaluation of tropospheric chemistry simulations for the Global Modeling Initiative (GMI)

    NASA Astrophysics Data System (ADS)

    Logan, J. A.; Bergman, D.; Rodriguez, J.; Chatfield, R.; Considine, D.; Wang, Y.; Jacob, D.; Prather, M.; Rotman, D.; Cameron-Smith, P.

    2003-04-01

    The NASA Global Modeling Initiative is a global 3-D modeling tool focused on addressing assessments of anthropogenic impacts in an optimal manner, consistent with the state of the science. It consists of a flexible modular platform in which components developed by different research groups for atmospheric transport, emissions, radiation, chemistry, and related processes can be evaluated and inter-compared. The key advantage of GMI is that it will facilitate exploration of how differences in the choice of model components affect the simulation of the atmospheric chemistry system, and ultimately, the uncertainty of assessments. The GMI model for tropospheric chemistry has been run for three sets of meteorological input: NASA Data Assimilation Office results for 1997 (GEOS-STRAT), and general circulation model results from NCAR's MACCM3 and from the 23-layer Model II' of NASA/GISS. The chemistry scheme and magnitude of stratospheric input was identical for all simulations, and the emissions were identical insofar as possible. We will present an evaluation of these simulations using surface, ozonesonde, and aircraft data, as well as a preliminary assessment of the causes of model-model differences resulting from the adoption of different meteorological fields.

  2. Geodesic acoustic mode in anisotropic plasmas using double adiabatic model and gyro-kinetic equation

    SciTech Connect

    Ren, Haijun; Cao, Jintao

    2014-12-15

    Geodesic acoustic mode in anisotropic tokamak plasmas is theoretically analyzed by using double adiabatic model and gyro-kinetic equation. The bi-Maxwellian distribution function for guiding-center ions is assumed to obtain a self-consistent form, yielding pressures satisfying the magnetohydrodynamic (MHD) anisotropic equilibrium condition. The double adiabatic model gives the dispersion relation of geodesic acoustic mode (GAM), which agrees well with the one derived from gyro-kinetic equation. The GAM frequency increases with the ratio of pressures, p{sub ⊥}/p{sub ∥}, and the Landau damping rate is dramatically decreased by p{sub ⊥}/p{sub ∥}. MHD result shows a low-frequency zonal flow existing for all p{sub ⊥}/p{sub ∥}, while according to the kinetic dispersion relation, no low-frequency branch exists for p{sub ⊥}/p{sub ∥}≳ 2.

  3. Practice effects on local and global dynamics of the ski-simulator task.

    PubMed

    Hong, S L; Newell, K M

    2006-03-01

    This experiment examined the acquisition of the global and local dynamics of the changes in the total body center of mass-platform and inter-limb coordination motions over the course of practice (20, 30 s trials each day for 7 days) in the ski-simulator task. Four blocks of trials, representative of early, moderate, and extensive practice were analyzed through power spectrum and coherence analyses. The oscillation frequencies of the knee joints became tuned to that of the platform-performer system and there were changes due to practice in the lower inter-limb coordination dynamics independent of the center of mass and platform coordination pattern. Acquisition of global level dynamics occurs to achieve a stable task solution that can allow for degenerate frequency- and phase-locking of the mechanical degrees of freedom at both the local intra- and inter-limb levels.

  4. Global Simulation of Proton Precipitation Due to Field Line Curvature During Substorms

    NASA Technical Reports Server (NTRS)

    Gilson, M. L.; Raeder, J.; Donovan, E.; Ge, Y. S.; Kepko, L.

    2012-01-01

    The low latitude boundary of the proton aurora (known as the Isotropy Boundary or IB) marks an important boundary between empty and full downgoing loss cones. There is significant evidence that the IB maps to a region in the magnetosphere where the ion gyroradius becomes comparable to the local field line curvature. However, the location of the IB in the magnetosphere remains in question. In this paper, we show simulated proton precipitation derived from the Field Line Curvature (FLC) model of proton scattering and a global magnetohydrodynamic simulation during two substorms. The simulated proton precipitation drifts equatorward during the growth phase, intensifies at onset and reproduces the azimuthal splitting published in previous studies. In the simulation, the pre-onset IB maps to 7-8 RE for the substorms presented and the azimuthal splitting is caused by the development of the substorm current wedge. The simulation also demonstrates that the central plasma sheet temperature can significantly influence when and where the azimuthal splitting takes place.

  5. Kinetics programs for simulation of tropospheric photochemistry on the global scale

    SciTech Connect

    Elliott, S.; Kao, C.Y.J.; Turco, R.P.; Zhao, X.P.

    1993-08-01

    The study of tropospheric kinetics underlies global change because key greenhouse gases are photochemically active. Modeling of tropospheric chemistry on a global scale is essential because some indirect greenhouse gases are short-lived and interact in a non-linear fashion. It is also extremely challenging, however; the global change grid is extensive in both the physical and temporal domains, and critical lower atmospheric species include the organics and their oxidized derivatives, which are numerous. Several types of optimization may be incorporated into kinetics modules to enhance their ability to simulate the complete lower atmospheric gas phase chemical system. (1) The photochemical integrator can be accelerated by avoiding matrix and iterative solutions and by establishing families. Accuracy and mass conservation are sacrificed in the absence of iteration, but atom balancing is restorable post hoc. (2) Chemistry can be arranged upon the massive grid to exploit parallel processing, and solutions to its continuity equations can be automated to permit experimentation with species and reaction lists or family definitions. Costs in programming effort will be incurred in these cases. (3) Complex hydrocarbon decay sequences can be streamlined either through structural lumping methods descended from smog investigations, which require considerable calibration, or by defining surrogates for classes of compounds, with a loss in constituent detail. From among the available options, the most advantageous permutations will vary with the specific nature of any eventual global scale study, and there is likely to be demand for many approaches. Tracer transport codes serve as a foundation upon which tropospheric chemistry packages will be tested. Encroachment of the NO{sub x} sphere of influence upon tropical rain forests and the upper free troposphere are two examples of specific problems to which full three-dimensional chemical simulations might be applied.

  6. Monte Carlo computer simulations of Venus equilibrium and global resurfacing models

    NASA Technical Reports Server (NTRS)

    Dawson, D. D.; Strom, R. G.; Schaber, G. G.

    1992-01-01

    Two models have been proposed for the resurfacing history of Venus: (1) equilibrium resurfacing and (2) global resurfacing. The equilibrium model consists of two cases: in case 1, areas less than or equal to 0.03 percent of the planet are spatially randomly resurfaced at intervals of less than or greater than 150,000 yr to produce the observed spatially random distribution of impact craters and average surface age of about 500 m.y.; and in case 2, areas greater than or equal to 10 percent of the planet are resurfaced at intervals of greater than or equal to 50 m.y. The global resurfacing model proposes that the entire planet was resurfaced about 500 m.y. ago, destroying the preexisting crater population and followed by significantly reduced volcanism and tectonism. The present crater population has accumulated since then with only 4 percent of the observed craters having been embayed by more recent lavas. To test the equilibrium resurfacing model we have run several Monte Carlo computer simulations for the two proposed cases. It is shown that the equilibrium resurfacing model is not a valid model for an explanation of the observed crater population characteristics or Venus' resurfacing history. The global resurfacing model is the most likely explanation for the characteristics of Venus' cratering record. The amount of resurfacing since that event, some 500 m.y. ago, can be estimated by a different type of Monte Carolo simulation. To date, our initial simulation has only considered the easiest case to implement. In this case, the volcanic events are randomly distributed across the entire planet and, therefore, contrary to observation, the flooded craters are also randomly distributed across the planet.

  7. Coupled Global-Regional Climate Model Simulations of Future Changes in Hydrology over Central America

    NASA Astrophysics Data System (ADS)

    Oglesby, R. J.; Erickson, D. J.; Hernandez, J. L.; Irwin, D.

    2005-12-01

    Central America covers a relatively small area, but is topographically very complex, has long coast-lines, large inland bodies of water, and very diverse land cover which is both natural and human-induced. As a result, Central America is plagued by hydrologic extremes, especially major flooding and drought events, in a region where many people still barely manage to eke out a living through subsistence. Therefore, considerable concern exists about whether these extreme events will change, either in magnitude or in number, as climate changes in the future. To address this concern, we have used global climate model simulations of future climate change to drive a regional climate model centered on Central America. We use the IPCC `business as usual' scenario 21st century run made with the NCAR CCSM3 global model to drive the regional model MM5 at 12 km resolution. We chose the `business as usual' scenario to focus on the largest possible changes that are likely to occur. Because we are most interested in near-term changes, our simulations are for the years 2010, 2015, and 2025. A long `present-day run (for 2005) allows us to distinguish between climate variability and any signal due to climate change. Furthermore, a multi-year run with MM5 forced by NCEP reanalyses allows an assessment of how well the coupled global-regional model performs over Central America. Our analyses suggest that the coupled model does a credible job simulating the current climate and hydrologic regime, though lack of sufficient observations strongly complicates this comparison. The suite of model runs for the future years is currently nearing completion, and key results will be presented at the meeting.

  8. Simulation of future global warming scenarios in rice paddies with an open-field warming facility

    PubMed Central

    2011-01-01

    To simulate expected future global warming, hexagonal arrays of infrared heaters have previously been used to warm open-field canopies of upland crops such as wheat. Through the use of concrete-anchored posts, improved software, overhead wires, extensive grounding, and monitoring with a thermal camera, the technology was safely and reliably extended to paddy rice fields. The system maintained canopy temperature increases within 0.5°C of daytime and nighttime set-point differences of 1.3 and 2.7°C 67% of the time. PMID:22145582

  9. Dynamics of global vegetation biomass simulated by the integrated Earth System Model

    NASA Astrophysics Data System (ADS)

    Mao, J.; Shi, X.; Di Vittorio, A. V.; Thornton, P. E.; Piao, S.; Yang, X.; Truesdale, J. E.; Bond-Lamberty, B. P.; Chini, L. P.; Thomson, A. M.; Hurtt, G. C.; Collins, W.; Edmonds, J.

    2014-12-01

    The global vegetation biomass stores huge amounts of carbon and is thus important to the global carbon budget (Pan et al., 2010). For the past few decades, different observation-based estimates and modeling of biomass in the above- and below-ground vegetation compartments have been comprehensively conducted (Saatchi et al., 2011; Baccini et al., 2012). However, uncertainties still exist, in particular for the simulation of biomass magnitude, tendency, and the response of biomass to climatic conditions and natural and human disturbances. The recently successful coupling of the integrated Earth System Model (iESM) (Di Vittorio et al., 2014; Bond-Lamberty et al., 2014), which links the Global Change Assessment Model (GCAM), Global Land-use Model (GLM), and Community Earth System Model (CESM), offers a great opportunity to understand the biomass-related dynamics in a fully-coupled natural and human modeling system. In this study, we focus on the systematic analysis and evaluation of the iESM simulated historical (1850-2005) and future (2006-2100) biomass changes and the response of the biomass dynamics to various impact factors, in particular the human-induced Land Use/Land Cover Change (LULCC). By analyzing the iESM simulations with and without the interactive LULCC feedbacks, we further study how and where the climate feedbacks affect socioeconomic decisions and LULCC, such as to alter vegetation carbon storage. References Pan Y et. al: A large and persistent carbon sink in the World's forests. Science 2011, 333:988-993. Saatchi SS et al: Benchmark map of forest carbon stocks in tropical regions across three continents. Proc Natl Acad Sci 2011, 108:9899-9904. Baccini A et al: Estimated carbon dioxide emissions from tropical deforestation improved by carbon-density maps. Nature Clim Change 2012, 2:182-185. Di Vittorio AV et al: From land use to land cover: restoring the afforestation signal in a coupled integrated assessment-earth system model and the implications for

  10. Modeling Persistent Contrails in a Large Eddy Simulation and a Global Climate Model

    NASA Astrophysics Data System (ADS)

    Naiman, A. D.; Lele, S. K.; Wilkerson, J. T.; Jacobson, M. Z.

    2009-12-01

    Two models of aircraft condensation trail (contrail) evolution have been developed: a high resolution, three-dimensional Large Eddy Simulation (LES) and a simple, low-cost Subgrid Contrail Model (SCM). The LES model was used to simulate contrail development from one second to twenty minutes after emission by the passing aircraft. The LES solves the incompressible Navier-Stokes equations with a Boussinesq approximation for buoyancy forces on an unstructured periodic grid. The numerical scheme uses a second-order finite volume spatial discretization and an implicit fractional-step method for time advancement. Lagrangian contrail particles grow according to a microphysical model of ice deposition and sublimation. The simulation is initialized with the wake of a commercial jet superimposed on a decaying turbulence field. The ambient atmosphere is stable and has a supersaturated relative humidity with respect to ice. Grid resolution is adjusted during the simulation, allowing higher resolution of flow structures than previous studies. We present results of a parametric study in which ambient turbulence levels, vertical wind shear, and aircraft type were varied. We find that higher levels of turbulence and shear promote mixing of aircraft exhaust with supersaturated ambient air, resulting in faster growth of ice and wider dispersion of the exhaust plume. The SCM was developed as a parameterization of contrail dynamics intended for use within a global model that examines the effect of commercial aviation on climate. The SCM provides an analytic solution to the changes in size and shape of a contrail cross-section over time due to global model grid-scale vertical wind shear and turbulence parameters. The model was derived from the physical equations of motion of a plume in a sheared, turbulent environment. Approximations based on physical reasoning and contrail observations allowed these equations to be reduced to simple ordinary differential equations in time with exact

  11. Simulation of future global warming scenarios in rice paddies with an open-field warming facility.

    PubMed

    Rehmani, Muhammad Ishaq Asif; Zhang, Jingqi; Li, Ganghua; Ata-Ul-Karim, Syed Tahir; Wang, Shaohua; Kimball, Bruce A; Yan, Chuan; Liu, Zhenghui; Ding, Yanfeng

    2011-12-06

    To simulate expected future global warming, hexagonal arrays of infrared heaters have previously been used to warm open-field canopies of upland crops such as wheat. Through the use of concrete-anchored posts, improved software, overhead wires, extensive grounding, and monitoring with a thermal camera, the technology was safely and reliably extended to paddy rice fields. The system maintained canopy temperature increases within 0.5°C of daytime and nighttime set-point differences of 1.3 and 2.7°C 67% of the time.

  12. Regulators of coastal wetland methane production and responses to simulated global change

    NASA Astrophysics Data System (ADS)

    Vizza, Carmella; West, William E.; Jones, Stuart E.; Hart, Julia A.; Lamberti, Gary A.

    2017-01-01

    Wetlands are the largest natural source of methane (CH4) emissions to the atmosphere, which vary along salinity and productivity gradients. Global change has the potential to reshape these gradients and therefore alter future contributions of wetlands to the global CH4 budget. Our study examined CH4 production along a natural salinity gradient in fully inundated coastal Alaska wetlands. In the laboratory, we incubated natural sediments to compare CH4 production rates between non-tidal freshwater and tidal brackish wetlands, and quantified the abundances of methanogens and sulfate-reducing bacteria in these ecosystems. We also simulated seawater intrusion and enhanced organic matter availability, which we predicted would have contrasting effects on coastal wetland CH4 production. Tidal brackish wetlands produced less CH4 than non-tidal freshwater wetlands probably due to high sulfate availability and generally higher abundances of sulfate-reducing bacteria, whereas non-tidal freshwater wetlands had significantly greater methanogen abundances. Seawater addition experiments with freshwater sediments, however, did not reduce CH4 production, perhaps because the 14-day incubation period was too short to elicit a shift in microbial communities. In contrast, increased organic matter enhanced CH4 production in 75 % of the incubations, but this response depended on the macrophyte species added, with half of the species treatments having no significant effect. Our study suggests that CH4 production in coastal wetlands, and therefore their overall contribution to the global CH4 cycle, will be sensitive to increased organic matter availability and potentially seawater intrusion. To better predict future wetland contributions to the global CH4 budget, future studies and modeling efforts should investigate how multiple global change mechanisms will interact to impact CH4 dynamics.

  13. A global magnetohydrodynamic simulation of the magnetosheath and magnetosphere when the interplanetary magnetic field is northward

    NASA Technical Reports Server (NTRS)

    Ogino, Tatsuki; Walker, Raymond I.; Ashour-Abdalla, Maha

    1992-01-01

    We have used a new high-resolution global magnetohydrodynamic simulation model to investigate the configuration of the magnetosphere when the interplanetary magnetic field (IMF) is northward. For northward IMF the magnetospheric configuration is dominated by magnetic reconnection at the tail lobe magnetopause tailward of the polar cusp. This results in a local thickening of the plasma sheet equatorward of the region of reconnection and the establishment of a convection system with two cells in each lobe. In the magnetosheath the plasma density and pressure decrease near the subsolar magnetopause, forming a depletion region. Along the flanks of the magnetosphere the magnetosheath flow is accelerated to values larger than the solar wind velocity. The magnetopause shape from the simulations is consistent with the empirically determined shape.

  14. Three-Dimensional Signatures of Intermittent Magnetic Reconnection in Global Simulations of Dayside Magnetosphere Dynamics

    NASA Technical Reports Server (NTRS)

    Kuznetsova, M.M.; Sibeck, D.; Hesse, M.; Rastatter, L.; Toth, G.

    2008-01-01

    We performed high resolution global MHD simulations of THEMIS dayside crossings events in May -June 2007. We found that magnetopause surface is not in steady-state even during extended periods of steady solar wind conditions. The so-called tilted reconnection lines become unstable due to formation of pressure bubbles, strong core field flux tubes, vortices, and traveling magnetic field cavities. The topology of FTEs differ from that in two dimension cartoons representing obliquely oriented quasi-2D flux rope. The structure of FTE is changing at spatial scales of 1 -2 Re. Closely located space probes can observe completely different signatures. Branches of bent flux rope can move in opposite directions. THEMIS and Cluster observations are consistent with signatures predicted by simulations.

  15. Multifluid Simulations of the Global Solar Wind Including Pickup Ions and Turbulence Modeling

    NASA Technical Reports Server (NTRS)

    Goldstein, Melvyn L.; Usmanov, A. V.

    2011-01-01

    I will describe a three-dimensional magnetohydrodynamic model of the solar wind that takes into account turbulent heating of the wind by velocity and magnetic fluctuations as well as a variety of effects produced by interstellar pickup protons. The interstellar pickup protons are treated in the model as one fluid and the protons and electrons are treated together as a second fluid. The model equations include a Reynolds decomposition of the plasma velocity and magnetic field into mean and fluctuating quantities, as well as energy transfer from interstellar pickup protons to solar wind protons that results in the deceleration of the solar wind. The model is used to simulate the global steady-state structure of the solar wind in the region from 0.3 to 100 AU. The simulation assumes that the background magnetic field on the Sun is either a dipole (aligned or tilted with respect to the solar rotation axis) or one that is deduced from solar magnetograms.

  16. Online Simulations and Forecasts of the Global Aerosol Distribution in the NASA GEOS-5 Model

    NASA Technical Reports Server (NTRS)

    Colarco, Peter

    2006-01-01

    We present an analysis of simulations of the global aerosol system in the NASA GEOS-5 transport, radiation, and chemistry model. The model includes representations of all major tropospheric aerosol species, including dust, sea salt, black carbon, particulate organic matter, and sulfates. The aerosols are run online for the period 2000 through 2005 in a simulation driven by assimilated meteorology from the NASA Goddard Data Assimilation System. Aerosol surface mass concentrations are compared with existing long-term surface measurement networks. Aerosol optical thickness is compared with ground-based AERONET sun photometry and space-based retrievals from MODIS, MISR, and OMI. Particular emphasis is placed here on consistent sampling of model and satellite aerosol optical thickness to account for diurnal variations in aerosol optical properties. Additionally, we illustrate the use of this system for providing chemical weather forecasts in support of various NASA and community field missions.

  17. Model-data fusion across ecosystems: from multi-site optimizations to global simulations

    NASA Astrophysics Data System (ADS)

    Kuppel, S.; Peylin, P.; Maignan, F.; Chevallier, F.; Kiely, G.; Montagnani, L.; Cescatti, A.

    2014-05-01

    This study uses a variational data assimilation framework to simultaneously constrain a global ecosystem model with eddy covariance measurements of daily net carbon (NEE) and latent heat (LE) fluxes from a large number of sites grouped in seven plant functional types (PFTs). It is an attempt to bridge the gap between the numerous site-specific parameter optimization works found in the literature and the generic parameterization used by most land surface models within each PFT. The present multi-site approach allows deriving PFT-generic sets of optimized parameters enhancing the agreement between measured and simulated fluxes at most of the sites considered, with performances often comparable to those of the corresponding site-specific optimizations. Besides reducing the PFT-averaged model-data root-mean-square difference (RMSD) and the associated daily output uncertainty, the optimization improves the simulated CO2 balance at tropical and temperate forests sites. The major site-level NEE adjustments at the seasonal scale are: reduced amplitude in C3 grasslands and boreal forests, increased seasonality in temperate evergreen forests, and better model-data phasing in temperate deciduous broadleaf forests. Conversely, the poorer performances in tropical evergreen broadleaf forests points to deficiencies regarding the modeling of phenology and soil water stress for this PFT. An evaluation with data-oriented estimates of photosynthesis (GPP) and ecosystem respiration (Reco) rates indicates distinctively improved simulations of both gross fluxes. The multi-site parameter sets are then tested against CO2 concentrations measured at 53 locations around the globe, showing significant adjustments of the modeled seasonality of atmospheric CO2 concentration, whose relevance seems PFT-dependent, along with an improved interannual variability. Lastly, a global scale evaluation with remote sensing NDVI measurements indicates an improvement of the simulated seasonal variations of

  18. Model-data fusion across ecosystems: from multisite optimizations to global simulations

    NASA Astrophysics Data System (ADS)

    Kuppel, S.; Peylin, P.; Maignan, F.; Chevallier, F.; Kiely, G.; Montagnani, L.; Cescatti, A.

    2014-11-01

    This study uses a variational data assimilation framework to simultaneously constrain a global ecosystem model with eddy covariance measurements of daily net ecosystem exchange (NEE) and latent heat (LE) fluxes from a large number of sites grouped in seven plant functional types (PFTs). It is an attempt to bridge the gap between the numerous site-specific parameter optimization works found in the literature and the generic parameterization used by most land surface models within each PFT. The present multisite approach allows deriving PFT-generic sets of optimized parameters enhancing the agreement between measured and simulated fluxes at most of the sites considered, with performances often comparable to those of the corresponding site-specific optimizations. Besides reducing the PFT-averaged model-data root-mean-square difference (RMSD) and the associated daily output uncertainty, the optimization improves the simulated CO2 balance at tropical and temperate forests sites. The major site-level NEE adjustments at the seasonal scale are reduced amplitude in C3 grasslands and boreal forests, increased seasonality in temperate evergreen forests, and bet