Low frequency mechanical modes of viruses with atomic detail

NASA Astrophysics Data System (ADS)

Dykeman, Eric; Sankey, Otto

2008-03-01

The low frequency mechanical modes of viruses can provide important insights into the large global motions that a virus may exhibit. Recently it has been proposed that these large global motions may be excited using impulsive stimulated Raman scattering producing permanent damage to the virus. In order to understand the coupling of external probes to the capsid, vibrational modes with atomic detail are essential. The standard approach to find the atomic modes of a molecule with N atoms requires the formation and diagonlization of a 3Nx3N matrix. As viruses have 10^5 or more atoms, the standard approach is difficult. Using ideas from electronic structure theory, we have developed a method to construct the mechanical modes of large molecules such as viruses with atomic detail. Application to viruses such as the cowpea chlorotic mottle virus, satellite tobacco necrosis virus, and M13 bacteriophage show a fairly complicated picture of the mechanical modes.

Comparison of Global and Mode of Action-Based Models for Aquatic Toxicity

EPA Science Inventory

The ability to estimate aquatic toxicity for a wide variety of chemicals is a critical need for ecological risk assessment and chemical regulation. The consensus in the literature is that mode of action (MOA) based QSAR (Quantitative Structure Activity Relationship) models yield ...

An in silico algal toxicity model with a wide applicability potential for industrial chemicals and pharmaceuticals.

PubMed

Önlü, Serli; Saçan, Melek Türker

2017-04-01

The authors modeled the 72-h algal toxicity data of hundreds of chemicals with different modes of action as a function of chemical structures. They developed mode of action-based local quantitative structure-toxicity relationship (QSTR) models for nonpolar and polar narcotics as well as a global QSTR model with a wide applicability potential for industrial chemicals and pharmaceuticals. The present study rigorously evaluated the generated models, meeting the Organisation for Economic Co-operation and Development principles of robustness, validity, and transparency. The proposed global model had a broad structural coverage for the toxicity prediction of diverse chemicals (some of which are high-production volume chemicals) with no experimental toxicity data. The global model is potentially useful for endpoint predictions, the evaluation of algal toxicity screening, and the prioritization of chemicals, as well as for the decision of further testing and the development of risk-management measures in a scientific and regulatory frame. Environ Toxicol Chem 2017;36:1012-1019. © 2016 SETAC. © 2016 SETAC.

Curvature, metric and parametrization of origami tessellations: theory and application to the eggbox pattern.

PubMed

Nassar, H; Lebée, A; Monasse, L

2017-01-01

Origami tessellations are particular textured morphing shell structures. Their unique folding and unfolding mechanisms on a local scale aggregate and bring on large changes in shape, curvature and elongation on a global scale. The existence of these global deformation modes allows for origami tessellations to fit non-trivial surfaces thus inspiring applications across a wide range of domains including structural engineering, architectural design and aerospace engineering. The present paper suggests a homogenization-type two-scale asymptotic method which, combined with standard tools from differential geometry of surfaces, yields a macroscopic continuous characterization of the global deformation modes of origami tessellations and other similar periodic pin-jointed trusses. The outcome of the method is a set of nonlinear differential equations governing the parametrization, metric and curvature of surfaces that the initially discrete structure can fit. The theory is presented through a case study of a fairly generic example: the eggbox pattern. The proposed continuous model predicts correctly the existence of various fittings that are subsequently constructed and illustrated.

Curvature, metric and parametrization of origami tessellations: theory and application to the eggbox pattern

NASA Astrophysics Data System (ADS)

Nassar, H.; Lebée, A.; Monasse, L.

2017-01-01

Origami tessellations are particular textured morphing shell structures. Their unique folding and unfolding mechanisms on a local scale aggregate and bring on large changes in shape, curvature and elongation on a global scale. The existence of these global deformation modes allows for origami tessellations to fit non-trivial surfaces thus inspiring applications across a wide range of domains including structural engineering, architectural design and aerospace engineering. The present paper suggests a homogenization-type two-scale asymptotic method which, combined with standard tools from differential geometry of surfaces, yields a macroscopic continuous characterization of the global deformation modes of origami tessellations and other similar periodic pin-jointed trusses. The outcome of the method is a set of nonlinear differential equations governing the parametrization, metric and curvature of surfaces that the initially discrete structure can fit. The theory is presented through a case study of a fairly generic example: the eggbox pattern. The proposed continuous model predicts correctly the existence of various fittings that are subsequently constructed and illustrated.

Decentralized semi-active damping of free structural vibrations by means of structural nodes with an on/off ability to transmit moments

NASA Astrophysics Data System (ADS)

Poplawski, Blazej; Mikułowski, Grzegorz; Mróz, Arkadiusz; Jankowski, Łukasz

2018-02-01

This paper proposes, tests numerically and verifies experimentally a decentralized control algorithm with local feedback for semi-active mitigation of free vibrations in frame structures. The algorithm aims at transferring the vibration energy of low-order, lightly-damped structural modes into high-frequency modes of vibration, where it is quickly damped by natural mechanisms of material damping. Such an approach to mitigation of vibrations, known as the prestress-accumulation release (PAR) strategy, has been earlier applied only in global control schemes to the fundamental vibration mode of a cantilever beam. In contrast, the decentralization and local feedback allows the approach proposed here to be applied to more complex frame structures and vibration patterns, where the global control ceases to be intuitively obvious. The actuators (truss-frame nodes with controllable ability to transmit moments) are essentially unblockable hinges that become unblocked only for very short time periods in order to trigger local modal transfer of energy. The paper proposes a computationally simple model of the controllable nodes, specifies the control performance measure, yields basic characteristics of the optimum control, proposes the control algorithm and then tests it in numerical and experimental examples.

Collisionless microtearing modes in hot tokamaks: Effect of trapped electrons

DOE Office of Scientific and Technical Information (OSTI.GOV)

Swamy, Aditya K.; Ganesh, R., E-mail: ganesh@ipr.res.in; Brunner, S.

2015-07-15

Collisionless microtearing modes have recently been found linearly unstable in sharp temperature gradient regions of large aspect ratio tokamaks. The magnetic drift resonance of passing electrons has been found to be sufficient to destabilise these modes above a threshold plasma β. A global gyrokinetic study, including both passing electrons as well as trapped electrons, shows that the non-adiabatic contribution of the trapped electrons provides a resonant destabilization, especially at large toroidal mode numbers, for a given aspect ratio. The global 2D mode structures show important changes to the destabilising electrostatic potential. The β threshold for the onset of the instabilitymore » is found to be generally downshifted by the inclusion of trapped electrons. A scan in the aspect ratio of the tokamak configuration, from medium to large but finite values, clearly indicates a significant destabilizing contribution from trapped electrons at small aspect ratio, with a diminishing role at larger aspect ratios.« less

Diurnal, seasonal and inter-annual variations in the Schumann resonance parameters

NASA Astrophysics Data System (ADS)

Price, Colin; Melnikov, Alexander

2004-09-01

The Schumann resonances (SR) represent an electromagnetic phenomenon in the Earth's atmosphere related to global lightning activity. The spectral characteristics of the SR modes are defined by their resonant mode amplitude, center frequency and half-width (Q-factor). Long-term (4 years) diurnal and seasonal variations of these parameters are presented based on measurements at a field site in the Negev desert, Israel. Variations of the different modes (8, 14 and 20Hz) and the different electromagnetic components (Hns, Hew and Ez) are presented. The power variations of the various modes and components show three dominant maxima in the diurnal cycle related to lightning activity in south-east Asia (0800UT), Africa (1400UT) and South America (2000UT). The largest global lightning activity occurs during the northern hemisphere summer (JJA) with the southern hemisphere summer (DJF) having the least lightning around the globe. The frequency and half-width (Q-factor) variations of the different modes and SR components are fairly complicated in structure, and will need additional theoretical work to explain their variations. However, the frequency variations are in excellent agreement with previous studies, implying that the frequency variations are robust features of the SR. The inter-annual variability of global lightning activity is shown to vary differently for each of the three major source regions of global lightning.

A Comparison of Solar p-Mode Parameters from MDI and Gong: Mode Frequencies and Structure Inversions

NASA Technical Reports Server (NTRS)

Basu, S.; Christensen-Dalsgaard, J.; Howe, R.; Schou, J.; Thompson, M. J.; Hill, F.; Komm, R.

2003-01-01

Helioseismic analysis of solar global oscillations allows investigation of the internal structure of the Sun. One important test of the reliability of the inferences from helioseismology is that the results from independent sets of contemporaneous data are consistent with one another. Here we compare mode frequencies from the Global Oscillation Network Group and Michelson Doppler Imager on board SOHO and resulting inversion results on the Sun's internal structure. The average relative differences between the data sets are typically less than 1 x 10(exp -5) substantially smaller than the formal errors in the differences; however, in some cases the frequency differences show a systematic behavior that might nonetheless influence the inversion results. We find that the differences in frequencies are not a result of instrumental effects but are almost entirely related to the data pipeline software. Inversion of the frequencies shows that their differences do not result in any significant effects on the resulting inferences on solar structure. We have also experimented with fitting asymmetric profiles to the oscillation power spectra and find that, compared with the symmetric fits, this causes no significant change in the inversion results.

A new Method for the Estimation of Initial Condition Uncertainty Structures in Mesoscale Models

NASA Astrophysics Data System (ADS)

Keller, J. D.; Bach, L.; Hense, A.

2012-12-01

The estimation of fast growing error modes of a system is a key interest of ensemble data assimilation when assessing uncertainty in initial conditions. Over the last two decades three methods (and variations of these methods) have evolved for global numerical weather prediction models: ensemble Kalman filter, singular vectors and breeding of growing modes (or now ensemble transform). While the former incorporates a priori model error information and observation error estimates to determine ensemble initial conditions, the latter two techniques directly address the error structures associated with Lyapunov vectors. However, in global models these structures are mainly associated with transient global wave patterns. When assessing initial condition uncertainty in mesoscale limited area models, several problems regarding the aforementioned techniques arise: (a) additional sources of uncertainty on the smaller scales contribute to the error and (b) error structures from the global scale may quickly move through the model domain (depending on the size of the domain). To address the latter problem, perturbation structures from global models are often included in the mesoscale predictions as perturbed boundary conditions. However, the initial perturbations (when used) are often generated with a variant of an ensemble Kalman filter which does not necessarily focus on the large scale error patterns. In the framework of the European regional reanalysis project of the Hans-Ertel-Center for Weather Research we use a mesoscale model with an implemented nudging data assimilation scheme which does not support ensemble data assimilation at all. In preparation of an ensemble-based regional reanalysis and for the estimation of three-dimensional atmospheric covariance structures, we implemented a new method for the assessment of fast growing error modes for mesoscale limited area models. The so-called self-breeding is development based on the breeding of growing modes technique. Initial perturbations are integrated forward for a short time period and then rescaled and added to the initial state again. Iterating this rapid breeding cycle provides estimates for the initial uncertainty structure (or local Lyapunov vectors) given a specific norm. To avoid that all ensemble perturbations converge towards the leading local Lyapunov vector we apply an ensemble transform variant to orthogonalize the perturbations in the sub-space spanned by the ensemble. By choosing different kind of norms to measure perturbation growth, this technique allows for estimating uncertainty patterns targeted at specific sources of errors (e.g. convection, turbulence). With case study experiments we show applications of the self-breeding method for different sources of uncertainty and different horizontal scales.

Low and High Frequency Models of Response Statistics of a Cylindrical Orthogrid Vehicle Panel to Acoustic Excitation

NASA Technical Reports Server (NTRS)

Smith, Andrew; LaVerde, Bruce; Teague, David; Gardner, Bryce; Cotoni, Vincent

2010-01-01

This presentation further develops the orthogrid vehicle panel work. Employed Hybrid Module capabilities to assess both low/mid frequency and high frequency models in the VA One simulation environment. The response estimates from three modeling approaches are compared to ground test measurements. Detailed Finite Element Model of the Test Article -Expect to capture both the global panel modes and the local pocket mode response, but at a considerable analysis expense (time & resources). A Composite Layered Construction equivalent global stiffness approximation using SEA -Expect to capture response of the global panel modes only. An SEA approximation using the Periodic Subsystem Formulation. A finite element model of a single periodic cell is used to derive the vibroacoustic properties of the entire periodic structure (modal density, radiation efficiency, etc. Expect to capture response at various locations on the panel (on the skin and on the ribs) with less analysis expense

Frequency-independent radiation modes of interior sound radiation: An analytical study

NASA Astrophysics Data System (ADS)

Hesse, C.; Vivar Perez, J. M.; Sinapius, M.

2017-03-01

Global active control methods of sound radiation into acoustic cavities necessitate the formulation of the interior sound field in terms of the surrounding structural velocity. This paper proposes an efficient approach to do this by presenting an analytical method to describe the radiation modes of interior sound radiation. The method requires no knowledge of the structural modal properties, which are often difficult to obtain in control applications. The procedure is exemplified for two generic systems of fluid-structure interaction, namely a rectangular plate coupled to a cuboid cavity and a hollow cylinder with the fluid in its enclosed cavity. The radiation modes are described as a subset of the acoustic eigenvectors on the structural-acoustic interface. For the two studied systems, they are therefore independent of frequency.

Normal mode Rossby waves observed in the upper stratosphere

NASA Technical Reports Server (NTRS)

Hirooka, T.; Hirota, I.

1985-01-01

In recent years, observational evidence has been obtained for westward traveling planetary waves in the middle atmosphere with the aid of global data from satellites. There is no doubt that the fair portion of the observed traveling waves can be understood as the manifestation of the normal mode Rossby waves which are theoretically derived from the tidal theory. Some observational aspects of the structure and behavior of the normal model Rossby waves in the upper stratosphere are reported. The data used are the global stratospheric geopotential thickness and height analyses which are derived mainly from the Stratospheric Sounding Units (SSUs) on board TIROS-N and NOAA satellites. A clear example of the influence of the normal mode Rossby wave on the mean flow is reported. The mechanism considered is interference between the normal mode Rossby wave and the quasi-stationary wave.

Spreading vs. Rifting as modes of extensional tectonics on the globally expanded Ganymede

NASA Astrophysics Data System (ADS)

Pizzi, Alberto; Domenica, Alessandra Di; Komatsu, Goro; Cofano, Alessandra; Mitri, Giuseppe; Bruzzone, Lorenzo

2017-05-01

The formation of Ganymede's sulci is likely related to extensional tectonics that affected this largest icy satellite of Jupiter. Through geometric and structural analyses we reconstructed the pre-deformed terrains and we recognized two different modes of extension associated with sulci. In the first mode, smooth sulci constitute spreading centers between two dark terrain plates, similar to the fast oceanic spreading centers on Earth. Here extension is primarily accommodated by crustal accretion of newly formed icy crust. In the second mode, dark terrain extension is mainly accommodated by swaths of normal fault systems analogous to Earth's continental crustal rifts. A comparison with terrestrial extensional analogues, based on the fault displacement/length (Dmax/L) ratio, spacing and morphology, showed that magmato-tectonic spreading centers and continental crustal rifts on Earth follow the same relative patterns observed on Ganymede. Our results suggest that the amount of extensional strain may have previously been underestimated since the occurrence of spreading centers may have played a major role in the tectonic evolution of the globally expanded Ganymede. We also discuss a possible model for the origin of the different modes of extension in the context of the global expansion of the satellite.

Dynamic testing and analysis of extension-twist-coupled composite tubular spars

NASA Astrophysics Data System (ADS)

Lake, Renee C.; Izapanah, Amir P.; Baucon, Robert M.

The results from a study aimed at improving the dynamic and aerodynamic characteristics of composite rotor blades through the use of extension-twist elastic coupling are presented. A set of extension-twist-coupled composite tubular spars, representative of the primary load carrying structure within a helicopter rotor blade, was manufactured using four plies of woven graphite/epoxy cloth 'prepreg.' These spars were non-circular in cross section design and were therefore subject to warping deformations. Three cross-sectional geometries were developed: square, D-shape, and flattened ellipse. Results from free-free vibration tests of the spars were compared with results from normal modes and frequency analyses of companion shell-finite-element models developed in MSC/NASTRAN. Five global or 'non-shell' modes were identified within the 0-2000 Hz range for each spar. The frequencies and associated mode shapes for the D-shape spar were correlated with analytical results, showing agreement within 13.8 percent. Frequencies corresponding to the five global mode shapes for the square spar agreed within 9.5 percent of the analytical results. Five global modes were similarly identified for the elliptical spar and agreed within 4.9 percent of the respective analytical results.

Dynamic testing and analysis of extension-twist-coupled composite tubular spars

NASA Technical Reports Server (NTRS)

Lake, Renee C.; Izapanah, Amir P.; Baucon, Robert M.

1992-01-01

The results from a study aimed at improving the dynamic and aerodynamic characteristics of composite rotor blades through the use of extension-twist elastic coupling are presented. A set of extension-twist-coupled composite tubular spars, representative of the primary load carrying structure within a helicopter rotor blade, was manufactured using four plies of woven graphite/epoxy cloth 'prepreg.' These spars were non-circular in cross section design and were therefore subject to warping deformations. Three cross-sectional geometries were developed: square, D-shape, and flattened ellipse. Results from free-free vibration tests of the spars were compared with results from normal modes and frequency analyses of companion shell-finite-element models developed in MSC/NASTRAN. Five global or 'non-shell' modes were identified within the 0-2000 Hz range for each spar. The frequencies and associated mode shapes for the D-shape spar were correlated with analytical results, showing agreement within 13.8 percent. Frequencies corresponding to the five global mode shapes for the square spar agreed within 9.5 percent of the analytical results. Five global modes were similarly identified for the elliptical spar and agreed within 4.9 percent of the respective analytical results.

Density perturbation mode structure of high frequency compressional and global Alfvén eigenmodes in the National Spherical Torus Experiment using a novel reflectometer analysis technique

NASA Astrophysics Data System (ADS)

Crocker, N. A.; Kubota, S.; Peebles, W. A.; Rhodes, T. L.; Fredrickson, E. D.; Belova, E.; Diallo, A.; LeBlanc, B. P.; Sabbagh, S. A.

2018-01-01

Reflectometry measurements of compressional (CAE) and global (GAE) Alfvén eigenmodes are analyzed to obtain the amplitude and spatial structure of the density perturbations associated with the modes. A novel analysis technique developed for this purpose is presented. The analysis also naturally yields the amplitude and spatial structure of the density contour radial displacement, which is found to be 2-4 times larger than the value estimated directly from the reflectometer measurements using the much simpler ‘mirror approximation’. The modes were driven by beam ions in a high power (6 MW) neutral beam heated H-mode discharge (#141398) in the National Spherical Torus Experiment. The results of the analysis are used to assess the contribution of the modes to core energy transport and ion heating. The total displacement amplitude of the modes, which is shown to be larger than previously estimated (Crocker et al 2013 Nucl. Fusion 53 43017), is compared to the predicted threshold (Gorelenkov et al 2010 Nucl. Fusion 50 84012) for the anomalously high heat diffusion inferred from transport modeling in similar NSTX discharges. The results of the analysis also have strong implications for the energy transport via coupling of CAEs to kinetic Alfvén waves seen in simulations with the Hybrid MHD code (Belova et al 2015 Phys. Rev. Lett. 115 15001). Finally, the amplitudes of the observed CAEs fall well below the threshold for causing significant ion heating by stochastic velocity space diffusion (Gates et al 2001 Phys. Rev. Lett. 87 205003).

Interfacial wave theory for dendritic structure of a growing needle crystal. I - Local instability mechanism. II - Wave-emission mechanism at the turning point

NASA Technical Reports Server (NTRS)

Xu, Jian-Jun

1989-01-01

The complicated dendritic structure of a growing needle crystal is studied on the basis of global interfacial wave theory. The local dispersion relation for normal modes is derived in a paraboloidal coordinate system using the multiple-variable-expansion method. It is shown that the global solution in a dendrite growth process incorporates the morphological instability factor and the traveling wave factor.

Nonlinear reconnecting edge localized modes in current-carrying plasmas

DOE PAGES

Ebrahimi, F.

2017-05-22

Nonlinear edge localized modes in a tokamak are examined using global three-dimensional resistive magnetohydrodynamics simulations. Coherent current-carrying filament (ribbon-like) structures wrapped around the torus are nonlinearly formed due to nonaxisymmetric reconnecting current sheet instabilities, the so-called peeling-like edge localized modes. These fast growing modes saturate by breaking axisymmetric current layers isolated near the plasma edge and go through repetitive relaxation cycles by expelling current radially outward and relaxing it back. The local bidirectional fluctuation-induced electromotive force (emf) from the edge localized modes, the dynamo action, relaxes the axisymmetric current density and forms current holes near the edge. Furthermore, the three-dimensionalmore » coherent current-carrying filament structures (sometimes referred to as 3-D plasmoids) observed here should also have strong implications for solar and astrophysical reconnection.« less

Progressive Fracture of Composite Structures

NASA Technical Reports Server (NTRS)

Chamis, Christos C.; Minnetyan, Levon

2008-01-01

A new approach is described for evaluating fracture in composite structures. This approach is independent of classical fracture mechanics parameters like fracture toughness. It relies on computational simulation and is programmed in a stand-alone integrated computer code. It is multiscale, multifunctional because it includes composite mechanics for the composite behavior and finite element analysis for predicting the structural response. It contains seven modules; layered composite mechanics (micro, macro, laminate), finite element, updating scheme, local fracture, global fracture, stress based failure modes, and fracture progression. The computer code is called CODSTRAN (Composite Durability Structural ANalysis). It is used in the present paper to evaluate the global fracture of four composite shell problems and one composite built-up structure. Results show that the composite shells and the built-up composite structure global fracture are enhanced when internal pressure is combined with shear loads.

A space-based climatology of diurnal MLT tidal winds, temperatures and densities from UARS wind measurements

NASA Astrophysics Data System (ADS)

Svoboda, Aaron A.; Forbes, Jeffrey M.; Miyahara, Saburo

2005-11-01

A self-consistent global tidal climatology, useful for comparing and interpreting radar observations from different locations around the globe, is created from space-based Upper Atmosphere Research Satellite (UARS) horizontal wind measurements. The climatology created includes tidal structures for horizontal winds, temperature and relative density, and is constructed by fitting local (in latitude and height) UARS wind data at 95 km to a set of basis functions called Hough mode extensions (HMEs). These basis functions are numerically computed modifications to Hough modes and are globally self-consistent in wind, temperature, and density. We first demonstrate this self-consistency with a proxy data set from the Kyushu University General Circulation Model, and then use a linear weighted superposition of the HMEs obtained from monthly fits to the UARS data to extrapolate the global, multi-variable tidal structure. A brief explanation of the HMEs’ origin is provided as well as information about a public website that has been set up to make the full extrapolated data sets available.

Studying Climate Response to Forcing by the Nonlinear Dynamical Mode Decomposition

NASA Astrophysics Data System (ADS)

Mukhin, Dmitry; Gavrilov, Andrey; Loskutov, Evgeny; Feigin, Alexander

2017-04-01

An analysis of global climate response to external forcing, both anthropogenic (mainly, CO2 and aerosol) and natural (solar and volcanic), is needed for adequate predictions of global climate change. Being complex dynamical system, the climate reacts to external perturbations exciting feedbacks (both positive and negative) making the response non-trivial and poorly predictable. Thus an extraction of internal modes of climate system, investigation of their interaction with external forcings and further modeling and forecast of their dynamics, are all the problems providing the success of climate modeling. In the report the new method for principal mode extraction from climate data is presented. The method is based on the Nonlinear Dynamical Mode (NDM) expansion [1,2], but takes into account a number of external forcings applied to the system. Each NDM is represented by hidden time series governing the observed variability, which, together with external forcing time series, are mapped onto data space. While forcing time series are considered to be known, the hidden unknown signals underlying the internal climate dynamics are extracted from observed data by the suggested method. In particular, it gives us an opportunity to study the evolution of principal system's mode structure in changing external conditions and separate the internal climate variability from trends forced by external perturbations. Furthermore, the modes so obtained can be extrapolated beyond the observational time series, and long-term prognosis of modes' structure including characteristics of interconnections and responses to external perturbations, can be carried out. In this work the method is used for reconstructing and studying the principal modes of climate variability on inter-annual and decadal time scales accounting the external forcings such as anthropogenic emissions, variations of the solar activity and volcanic activity. The structure of the obtained modes as well as their response to external factors, e.g. forecast their change in 21 century under different CO2 emission scenarios, are discussed. [1] Mukhin, D., Gavrilov, A., Feigin, A., Loskutov, E., & Kurths, J. (2015). Principal nonlinear dynamical modes of climate variability. Scientific Reports, 5, 15510. http://doi.org/10.1038/srep15510 [2] Gavrilov, A., Mukhin, D., Loskutov, E., Volodin, E., Feigin, A., & Kurths, J. (2016). Method for reconstructing nonlinear modes with adaptive structure from multidimensional data. Chaos: An Interdisciplinary Journal of Nonlinear Science, 26(12), 123101. http://doi.org/10.1063/1.4968852

A theory for protein dynamics: Global anisotropy and a normal mode approach to local complexity

NASA Astrophysics Data System (ADS)

Copperman, Jeremy; Romano, Pablo; Guenza, Marina

2014-03-01

We propose a novel Langevin equation description for the dynamics of biological macromolecules by projecting the solvent and all atomic degrees of freedom onto a set of coarse-grained sites at the single residue level. We utilize a multi-scale approach where molecular dynamic simulations are performed to obtain equilibrium structural correlations input to a modified Rouse-Zimm description which can be solved analytically. The normal mode solution provides a minimal basis set to account for important properties of biological polymers such as the anisotropic global structure, and internal motion on a complex free-energy surface. This multi-scale modeling method predicts the dynamics of both global rotational diffusion and constrained internal motion from the picosecond to the nanosecond regime, and is quantitative when compared to both simulation trajectory and NMR relaxation times. Utilizing non-equilibrium sampling techniques and an explicit treatment of the free-energy barriers in the mode coordinates, the model is extended to include biologically important fluctuations in the microsecond regime, such as bubble and fork formation in nucleic acids, and protein domain motion. This work supported by the NSF under the Graduate STEM Fellows in K-12 Education (GK-12) program, grant DGE-0742540 and NSF grant DMR-0804145, computational support from XSEDE and ACISS.

Quasi-periodic oscillations and the global modes of relativistic, MHD accretion discs

NASA Astrophysics Data System (ADS)

Dewberry, Janosz W.; Latter, Henrik N.; Ogilvie, Gordon I.

2018-05-01

The high-frequency quasi-periodic oscillations that punctuate the light curves of X-ray binary systems present a window on to the intrinsic properties of stellar-mass black holes and hence a testbed for general relativity. One explanation for these features is that relativistic distortion of the accretion disc's differential rotation creates a trapping region in which inertial waves (r-modes) might grow to observable amplitudes. Local analyses, however, predict that large-scale magnetic fields push this trapping region to the inner disc edge, where conditions may be unfavourable for r-mode growth. We revisit this problem from a pseudo-Newtonian but fully global perspective, deriving linearized equations describing a relativistic, magnetized accretion flow, and calculating normal modes with and without vertical density stratification. In an unstratified model we confirm that vertical magnetic fields drive r-modes towards the inner edge, though the effect depends on the choice of vertical wavenumber. In a global model we better quantify this susceptibility, and its dependence on the disc's vertical structure and thickness. Our calculations suggest that in thin discs, r-modes may remain independent of the inner disc edge for vertical magnetic fields with plasma betas as low as β ≈ 100-300. We posit that the appearance of r-modes in observations may be more determined by a competition between excitation and damping mechanisms near the ISCO than by the modification of the trapping region by magnetic fields.

Coupling between Catalytic Loop Motions and Enzyme Global Dynamics

PubMed Central

Kurkcuoglu, Zeynep; Bakan, Ahmet; Kocaman, Duygu; Bahar, Ivet; Doruker, Pemra

2012-01-01

Catalytic loop motions facilitate substrate recognition and binding in many enzymes. While these motions appear to be highly flexible, their functional significance suggests that structure-encoded preferences may play a role in selecting particular mechanisms of motions. We performed an extensive study on a set of enzymes to assess whether the collective/global dynamics, as predicted by elastic network models (ENMs), facilitates or even defines the local motions undergone by functional loops. Our dataset includes a total of 117 crystal structures for ten enzymes of different sizes and oligomerization states. Each enzyme contains a specific functional/catalytic loop (10–21 residues long) that closes over the active site during catalysis. Principal component analysis (PCA) of the available crystal structures (including apo and ligand-bound forms) for each enzyme revealed the dominant conformational changes taking place in these loops upon substrate binding. These experimentally observed loop reconfigurations are shown to be predominantly driven by energetically favored modes of motion intrinsically accessible to the enzyme in the absence of its substrate. The analysis suggests that robust global modes cooperatively defined by the overall enzyme architecture also entail local components that assist in suitable opening/closure of the catalytic loop over the active site. PMID:23028297

Optimization of composite box-beam structures including effects of subcomponent interactions

NASA Technical Reports Server (NTRS)

Ragon, Scott A.; Guerdal, Zafer; Starnes, James H., Jr.

1995-01-01

Minimum mass designs are obtained for a simple box beam structure subject to bending, torque and combined bending/torque load cases. These designs are obtained subject to point strain and linear buckling constraints. The present work differs from previous efforts in that special attention is payed to including the effects of subcomponent panel interaction in the optimal design process. Two different approaches are used to impose the buckling constraints. When the global approach is used, buckling constraints are imposed on the global structure via a linear eigenvalue analysis. This approach allows the subcomponent panels to interact in a realistic manner. The results obtained using this approach are compared to results obtained using a traditional, less expensive approach, called the local approach. When the local approach is used, in-plane loads are extracted from the global model and used to impose buckling constraints on each subcomponent panel individually. In the global cases, it is found that there can be significant interaction between skin, spar, and rib design variables. This coupling is weak or nonexistent in the local designs. It is determined that weight savings of up to 7% may be obtained by using the global approach instead of the local approach to design these structures. Several of the designs obtained using the linear buckling analysis are subjected to a geometrically nonlinear analysis. For the designs which were subjected to bending loads, the innermost rib panel begins to collapse at less than half the intended design load and in a mode different from that predicted by linear analysis. The discrepancy between the predicted linear and nonlinear responses is attributed to the effects of the nonlinear rib crushing load, and the parameter which controls this rib collapse failure mode is shown to be the rib thickness. The rib collapse failure mode may be avoided by increasing the rib thickness above the value obtained from the (linear analysis based) optimizer. It is concluded that it would be necessary to include geometric nonlinearities in the design optimization process if the true optimum in this case were to be found.

Multiscale Multifunctional Progressive Fracture of Composite Structures

NASA Technical Reports Server (NTRS)

Chamis, C. C.; Minnetyan, L.

2012-01-01

A new approach is described for evaluating fracture in composite structures. This approach is independent of classical fracture mechanics parameters like fracture toughness. It relies on computational simulation and is programmed in a stand-alone integrated computer code. It is multiscale, multifunctional because it includes composite mechanics for the composite behavior and finite element analysis for predicting the structural response. It contains seven modules; layered composite mechanics (micro, macro, laminate), finite element, updating scheme, local fracture, global fracture, stress based failure modes, and fracture progression. The computer code is called CODSTRAN (Composite Durability Structural ANalysis). It is used in the present paper to evaluate the global fracture of four composite shell problems and one composite built-up structure. Results show that the composite shells. Global fracture is enhanced when internal pressure is combined with shear loads. The old reference denotes that nothing has been added to this comprehensive report since then.

Normal mode-guided transition pathway generation in proteins

PubMed Central

Lee, Byung Ho; Seo, Sangjae; Kim, Min Hyeok; Kim, Youngjin; Jo, Soojin; Choi, Moon-ki; Lee, Hoomin; Choi, Jae Boong

2017-01-01

The biological function of proteins is closely related to its structural motion. For instance, structurally misfolded proteins do not function properly. Although we are able to experimentally obtain structural information on proteins, it is still challenging to capture their dynamics, such as transition processes. Therefore, we need a simulation method to predict the transition pathways of a protein in order to understand and study large functional deformations. Here, we present a new simulation method called normal mode-guided elastic network interpolation (NGENI) that performs normal modes analysis iteratively to predict transition pathways of proteins. To be more specific, NGENI obtains displacement vectors that determine intermediate structures by interpolating the distance between two end-point conformations, similar to a morphing method called elastic network interpolation. However, the displacement vector is regarded as a linear combination of the normal mode vectors of each intermediate structure, in order to enhance the physical sense of the proposed pathways. As a result, we can generate more reasonable transition pathways geometrically and thermodynamically. By using not only all normal modes, but also in part using only the lowest normal modes, NGENI can still generate reasonable pathways for large deformations in proteins. This study shows that global protein transitions are dominated by collective motion, which means that a few lowest normal modes play an important role in this process. NGENI has considerable merit in terms of computational cost because it is possible to generate transition pathways by partial degrees of freedom, while conventional methods are not capable of this. PMID:29020017

Theory and evidence of global Rossby waves in upper main-sequence stars: r-mode oscillations in many Kepler stars

NASA Astrophysics Data System (ADS)

Saio, Hideyuki; Kurtz, Donald W.; Murphy, Simon J.; Antoci, Victoria L.; Lee, Umin

2018-02-01

Asteroseismic inference from pressure modes (p modes) and buoyancy, or gravity, modes (g modes) is ubiquitous for stars across the Hertzsprung-Russell diagram. Until now, however, discussion of r modes (global Rossby waves) has been rare. Here we derive the expected frequency ranges of r modes in the observational frame by considering the visibility of these modes. We find that the frequencies of r modes of azimuthal order m appear as groups at slightly lower frequency than m times the rotation frequency. Comparing the visibility curves for r modes with Fourier amplitude spectra of Kepler light curves of upper main-sequence B, A, and F stars, we find that r modes are present in many γ Dor stars (as first discovered by Van Reeth et al.), spotted stars, and so-called heartbeat stars, which are highly eccentric binary stars. We also find a signature of r modes in a frequently bursting Be star observed by Kepler. In the amplitude spectra of moderately to rapidly rotating γ Dor stars, r-mode frequency groups appear at lower frequency than prograde g-mode frequency groups, while in the amplitude spectra of spotted early A to B stars, groups of symmetric (with respect to the equator) r-mode frequencies appear just below the frequency of a structured peak that we suggest represents an approximate stellar rotation rate. In many heartbeat stars, a group of frequencies can be fitted with symmetric m = 1 r modes, which can be used to obtain rotation frequencies of these stars.

Vertical resolution of baroclinic modes in global ocean models

NASA Astrophysics Data System (ADS)

Stewart, K. D.; Hogg, A. McC.; Griffies, S. M.; Heerdegen, A. P.; Ward, M. L.; Spence, P.; England, M. H.

2017-05-01

Improvements in the horizontal resolution of global ocean models, motivated by the horizontal resolution requirements for specific flow features, has advanced modelling capabilities into the dynamical regime dominated by mesoscale variability. In contrast, the choice of the vertical grid remains a subjective choice, and it is not clear that efforts to improve vertical resolution adequately support their horizontal counterparts. Indeed, considering that the bulk of the vertical ocean dynamics (including convection) are parameterized, it is not immediately obvious what the vertical grid is supposed to resolve. Here, we propose that the primary purpose of the vertical grid in a hydrostatic ocean model is to resolve the vertical structure of horizontal flows, rather than to resolve vertical motion. With this principle we construct vertical grids based on their abilities to represent baroclinic modal structures commensurate with the theoretical capabilities of a given horizontal grid. This approach is designed to ensure that the vertical grids of global ocean models complement (and, importantly, to not undermine) the resolution capabilities of the horizontal grid. We find that for z-coordinate global ocean models, at least 50 well-positioned vertical levels are required to resolve the first baroclinic mode, with an additional 25 levels per subsequent mode. High-resolution ocean-sea ice simulations are used to illustrate some of the dynamical enhancements gained by improving the vertical resolution of a 1/10° global ocean model. These enhancements include substantial increases in the sea surface height variance (∼30% increase south of 40°S), the barotropic and baroclinic eddy kinetic energies (up to 200% increase on and surrounding the Antarctic continental shelf and slopes), and the overturning streamfunction in potential density space (near-tripling of the Antarctic Bottom Water cell at 65°S).

Energetic-particle-modified global Alfvén eigenmodes

NASA Astrophysics Data System (ADS)

Lestz, J. B.; Belova, E. V.; Gorelenkov, N. N.

2018-04-01

Fully self-consistent hybrid MHD/particle simulations reveal strong energetic particle modifications to sub-cyclotron global Alfvén eigenmodes (GAEs) in low-aspect ratio, NSTX-like conditions. Key parameters defining the fast ion distribution function—the normalized injection velocity v0/vA and central pitch—are varied in order to study their influence on the characteristics of the excited modes. It is found that the frequency of the most unstable mode changes significantly and continuously with beam parameters, in accordance with the Doppler-shifted cyclotron resonances which drive the modes, and depending most substantially on v0/vA . This unexpected result is present for both counter-propagating GAEs, which are routinely excited in NSTX, and high frequency co-GAEs, which have not been previously studied. Large changes in frequency without clear corresponding changes in the mode structure are signatures of an energetic particle mode, referred to here as an energetic-particle-modified GAE. Additional simulations conducted for a fixed MHD equilibrium demonstrate that the GAE frequency shift cannot be explained by the equilibrium changes due to energetic particle effects.

Energetic-particle-modified global Alfven eigenmodes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lestz, J. B.; Belova, E. V.; Gorelenkov, N. N.

Fully self-consistent hybrid MHD/particle simulations reveal strong energetic particle modifications to sub-cyclotron global Alfvén eigenmodes (GAEs) in low-aspect ratio, NSTX-like conditions. Key parameters defining the fast ion distribution function—the normalized injection velocity v 0/v A and central pitch—are varied in order to study their influence on the characteristics of the excited modes. It is found that the frequency of the most unstable mode changes significantly and continuously with beam parameters, in accordance with the Doppler-shifted cyclotron resonances which drive the modes, and depending most substantially on v 0/v A. This unexpected result is present for both counter-propagating GAEs, which aremore » routinely excited in NSTX, and high frequency co-GAEs, which have not been previously studied. Large changes in frequency without clear corresponding changes in the mode structure are signatures of an energetic particle mode, referred to here as an energetic-particle-modified GAE. In conclusion, additional simulations conducted for a fixed MHD equilibrium demonstrate that the GAE frequency shift cannot be explained by the equilibrium changes due to energetic particle effects.« less

Energetic-particle-modified global Alfven eigenmodes

DOE PAGES

Lestz, J. B.; Belova, E. V.; Gorelenkov, N. N.

2018-04-30

Fully self-consistent hybrid MHD/particle simulations reveal strong energetic particle modifications to sub-cyclotron global Alfvén eigenmodes (GAEs) in low-aspect ratio, NSTX-like conditions. Key parameters defining the fast ion distribution function—the normalized injection velocity v 0/v A and central pitch—are varied in order to study their influence on the characteristics of the excited modes. It is found that the frequency of the most unstable mode changes significantly and continuously with beam parameters, in accordance with the Doppler-shifted cyclotron resonances which drive the modes, and depending most substantially on v 0/v A. This unexpected result is present for both counter-propagating GAEs, which aremore » routinely excited in NSTX, and high frequency co-GAEs, which have not been previously studied. Large changes in frequency without clear corresponding changes in the mode structure are signatures of an energetic particle mode, referred to here as an energetic-particle-modified GAE. In conclusion, additional simulations conducted for a fixed MHD equilibrium demonstrate that the GAE frequency shift cannot be explained by the equilibrium changes due to energetic particle effects.« less

Mechanical Failure Mode of Metal Nanowires: Global Deformation versus Local Deformation

PubMed Central

Ho, Duc Tam; Im, Youngtae; Kwon, Soon-Yong; Earmme, Youn Young; Kim, Sung Youb

2015-01-01

It is believed that the failure mode of metal nanowires under tensile loading is the result of the nucleation and propagation of dislocations. Such failure modes can be slip, partial slip or twinning and therefore they are regarded as local deformation. Here we provide numerical and theoretical evidences to show that global deformation is another predominant failure mode of nanowires under tensile loading. At the global deformation mode, nanowires fail with a large contraction along a lateral direction and a large expansion along the other lateral direction. In addition, there is a competition between global and local deformations. Nanowires loaded at low temperature exhibit global failure mode first and then local deformation follows later. We show that the global deformation originates from the intrinsic instability of the nanowires and that temperature is a main parameter that decides the global or local deformation as the failure mode of nanowires. PMID:26087445

System identification for Space Station Freedom using observer/Kalman filter Markov parameters. M.S. Thesis

NASA Technical Reports Server (NTRS)

Papadopoulos, Michael; Tolson, Robert H.

1993-01-01

The Modal Identification Experiment (MIE) is a proposed experiment to define the dynamic characteristics of Space Station Freedom. Previous studies emphasized free-decay modal identification. The feasibility of using a forced response method (Observer/Kalman Filter Identification (OKID)) is addressed. The interest in using OKID is to determine the input mode shape matrix which can be used for controller design or control-structure interaction analysis, and investigate if forced response methods may aid in separating closely spaced modes. A model of the SC-7 configuration of Space Station Freedom was excited using simulated control system thrusters to obtain acceleration output. It is shown that an 'optimum' number of outputs exists for OKID. To recover global mode shapes, a modified method called Global-Local OKID was developed. This study shows that using data from a long forced response followed by free-decay leads to the 'best' modal identification. Twelve out of the thirteen target modes were identified for such an output.

Edge-localized mode avoidance and pedestal structure in I-mode plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Walk, J. R., E-mail: jrwalk@psfc.mit.edu; Hughes, J. W.; Hubbard, A. E.

I-mode is a high-performance tokamak regime characterized by the formation of a temperature pedestal and enhanced energy confinement, without an accompanying density pedestal or drop in particle and impurity transport. I-mode operation appears to have naturally occurring suppression of large Edge-Localized Modes (ELMs) in addition to its highly favorable scalings of pedestal structure and overall performance. Extensive study of the ELMy H-mode has led to the development of the EPED model, which utilizes calculations of coupled peeling-ballooning MHD modes and kinetic-ballooning mode (KBM) stability limits to predict the pedestal structure preceding an ELM crash. We apply similar tools to themore » structure and ELM stability of I-mode pedestals. Analysis of I-mode discharges prepared with high-resolution pedestal data from the most recent C-Mod campaign reveals favorable pedestal scalings for extrapolation to large machines—pedestal temperature scales strongly with power per particle P{sub net}/n{sup ¯}{sub e}, and likewise pedestal pressure scales as the net heating power (consistent with weak degradation of confinement with heating power). Matched discharges in current, field, and shaping demonstrate the decoupling of energy and particle transport in I-mode, increasing fueling to span nearly a factor of two in density while maintaining matched temperature pedestals with consistent levels of P{sub net}/n{sup ¯}{sub e}. This is consistent with targets for increased performance in I-mode, elevating pedestal β{sub p} and global performance with matched increases in density and heating power. MHD calculations using the ELITE code indicate that I-mode pedestals are strongly stable to edge peeling-ballooning instabilities. Likewise, numerical modeling of the KBM turbulence onset, as well as scalings of the pedestal width with poloidal beta, indicates that I-mode pedestals are not limited by KBM turbulence—both features identified with the trigger for large ELMs, consistent with the observed suppression of large ELMs in I-mode.« less

Edge-localized mode avoidance and pedestal structure in I-mode plasmasa)

NASA Astrophysics Data System (ADS)

Walk, J. R.; Hughes, J. W.; Hubbard, A. E.; Terry, J. L.; Whyte, D. G.; White, A. E.; Baek, S. G.; Reinke, M. L.; Theiler, C.; Churchill, R. M.; Rice, J. E.; Snyder, P. B.; Osborne, T.; Dominguez, A.; Cziegler, I.

2014-05-01

I-mode is a high-performance tokamak regime characterized by the formation of a temperature pedestal and enhanced energy confinement, without an accompanying density pedestal or drop in particle and impurity transport. I-mode operation appears to have naturally occurring suppression of large Edge-Localized Modes (ELMs) in addition to its highly favorable scalings of pedestal structure and overall performance. Extensive study of the ELMy H-mode has led to the development of the EPED model, which utilizes calculations of coupled peeling-ballooning MHD modes and kinetic-ballooning mode (KBM) stability limits to predict the pedestal structure preceding an ELM crash. We apply similar tools to the structure and ELM stability of I-mode pedestals. Analysis of I-mode discharges prepared with high-resolution pedestal data from the most recent C-Mod campaign reveals favorable pedestal scalings for extrapolation to large machines—pedestal temperature scales strongly with power per particle Pnet/n ¯e, and likewise pedestal pressure scales as the net heating power (consistent with weak degradation of confinement with heating power). Matched discharges in current, field, and shaping demonstrate the decoupling of energy and particle transport in I-mode, increasing fueling to span nearly a factor of two in density while maintaining matched temperature pedestals with consistent levels of Pnet/n ¯e. This is consistent with targets for increased performance in I-mode, elevating pedestal βp and global performance with matched increases in density and heating power. MHD calculations using the ELITE code indicate that I-mode pedestals are strongly stable to edge peeling-ballooning instabilities. Likewise, numerical modeling of the KBM turbulence onset, as well as scalings of the pedestal width with poloidal beta, indicates that I-mode pedestals are not limited by KBM turbulence—both features identified with the trigger for large ELMs, consistent with the observed suppression of large ELMs in I-mode.

Topological Defects and Structures in the Early Universe

NASA Astrophysics Data System (ADS)

Zhu, Yong

1997-08-01

This thesis discusses the topological defects generated in the early universe and their contributions to cosmic structure formation. First, we investigate non-Gaussian isocurvature perturbations generated by the evolution of Goldstone modes during inflation. If a global symmetry is broken before inflation, the resulting Goldstone modes are disordered during inflation in a precise and predictable way. After inflation these Goldstone modes order themselves in a self-similar way, much as Goldstone modes in field ordering scenarios based on the Kibble mechanism. For (Hi2/Mpl2)~10- 6, through their gravitational interaction these Goldstone modes generate density perturbations of approximately the right magnitude to explain the cosmic microwave background (CMB) anisotropy and seed the structure seen in the universe today. In such a model non-Gaussian perturbations result because to lowest order density perturbations are sourced by products of Gaussian fields. We explore the issue of phase dispersion and conclude that this non-Gaussian model predicts Doppler peaks in the CMB anisotropy. Topological defects generated from quantum fluctuations during inflation are studied in chapter four. We present a calculation of the power spectrum generated in a classically symmetry-breaking O(N) scalar field through inflationary quantum fluctuations, using the large-N limit. The effective potential of the theory in de Sitter space is obtained from a gap equation which is exact at large N. Quantum fluctuations restore the O(N) symmetry in de Sitter space, but for the finite values of N of interest, there is symmetry breaking and phase ordering after inflation, described by the classical nonlinear sigma model. The scalar field power spectrum is obtained as a function of the scalar field self-coupling. In the second part of the thesis, we investigate non-Abelian topological worm-holes, obtained when winding number one texture field is coupled to Einstein gravity with a conserved global charge. This topological wormhole has the same Euclidean action as axion wormholes and charged scalar wormholes. We find that free topological wormholes are spontaneously generated in the Euclidean space-time with finite density. It is then shown that wormholes with finite density might destroy any long range order in the global fields.

Substructure Versus Property-Level Dispersed Modes Calculation

NASA Technical Reports Server (NTRS)

Stewart, Eric C.; Peck, Jeff A.; Bush, T. Jason; Fulcher, Clay W.

2016-01-01

This paper calculates the effect of perturbed finite element mass and stiffness values on the eigenvectors and eigenvalues of the finite element model. The structure is perturbed in two ways: at the "subelement" level and at the material property level. In the subelement eigenvalue uncertainty analysis the mass and stiffness of each subelement is perturbed by a factor before being assembled into the global matrices. In the property-level eigenvalue uncertainty analysis all material density and stiffness parameters of the structure are perturbed modified prior to the eigenvalue analysis. The eigenvalue and eigenvector dispersions of each analysis (subelement and property-level) are also calculated using an analytical sensitivity approximation. Two structural models are used to compare these methods: a cantilevered beam model, and a model of the Space Launch System. For each structural model it is shown how well the analytical sensitivity modes approximate the exact modes when the uncertainties are applied at the subelement level and at the property level.

Global Observations of Magnetospheric High-m Poloidal Waves During the 22 June 2015 Magnetic Storm

NASA Technical Reports Server (NTRS)

Le, G.; Chi, P. J.; Strangeway, R. J.; Russell, C. T.; Slavin, J. A.; Takahashi, K.; Singer, H. J.; Anderson, B. J.; Bromund, K.; Fischer, D.;

Global observations of magnetospheric high-m poloidal waves during the 22 June 2015 magnetic storm.

PubMed

Le, G; Chi, P J; Strangeway, R J; Russell, C T; Slavin, J A; Takahashi, K; Singer, H J; Anderson, B J; Bromund, K; Fischer, D; Kepko, E L; Magnes, W; Nakamura, R; Plaschke, F; Torbert, R B

2017-04-28

We report global observations of high- m poloidal waves during the recovery phase of the 22 June 2015 magnetic storm from a constellation of widely spaced satellites of five missions including Magnetospheric Multiscale (MMS), Van Allen Probes, Time History of Events and Macroscale Interactions during Substorm (THEMIS), Cluster, and Geostationary Operational Environmental Satellites (GOES). The combined observations demonstrate the global spatial extent of storm time poloidal waves. MMS observations confirm high azimuthal wave numbers ( m  ~ 100). Mode identification indicates the waves are associated with the second harmonic of field line resonances. The wave frequencies exhibit a decreasing trend as L increases, distinguishing them from the single-frequency global poloidal modes normally observed during quiet times. Detailed examination of the instantaneous frequency reveals discrete spatial structures with step-like frequency changes along L . Each discrete L shell has a steady wave frequency and spans about 1  R E , suggesting that there exist a discrete number of drift-bounce resonance regions across L shells during storm times.

Statistical analysis of modeling error in structural dynamic systems

NASA Technical Reports Server (NTRS)

Hasselman, T. K.; Chrostowski, J. D.

1990-01-01

The paper presents a generic statistical model of the (total) modeling error for conventional space structures in their launch configuration. Modeling error is defined as the difference between analytical prediction and experimental measurement. It is represented by the differences between predicted and measured real eigenvalues and eigenvectors. Comparisons are made between pre-test and post-test models. Total modeling error is then subdivided into measurement error, experimental error and 'pure' modeling error, and comparisons made between measurement error and total modeling error. The generic statistical model presented in this paper is based on the first four global (primary structure) modes of four different structures belonging to the generic category of Conventional Space Structures (specifically excluding large truss-type space structures). As such, it may be used to evaluate the uncertainty of predicted mode shapes and frequencies, sinusoidal response, or the transient response of other structures belonging to the same generic category.

Magnetorotational Instability: Nonmodal Growth and the Relationship of Global Modes to the Shearing Box

DOE Office of Scientific and Technical Information (OSTI.GOV)

J Squire, A Bhattacharjee

We study the magnetorotational instability (MRI) (Balbus & Hawley 1998) using non-modal stability techniques.Despite the spectral instability of many forms of the MRI, this proves to be a natural method of analysis that is well-suited to deal with the non-self-adjoint nature of the linear MRI equations. We find that the fastest growing linear MRI structures on both local and global domains can look very diff erent to the eigenmodes, invariably resembling waves shearing with the background flow (shear waves). In addition, such structures can grow many times faster than the least stable eigenmode over long time periods, and be localizedmore » in a completely di fferent region of space. These ideas lead – for both axisymmetric and non-axisymmetric modes – to a natural connection between the global MRI and the local shearing box approximation. By illustrating that the fastest growing global structure is well described by the ordinary diff erential equations (ODEs) governing a single shear wave, we find that the shearing box is a very sensible approximation for the linear MRI, contrary to many previous claims. Since the shear wave ODEs are most naturally understood using non-modal analysis techniques, we conclude by analyzing local MRI growth over finite time-scales using these methods. The strong growth over a wide range of wave-numbers suggests that non-modal linear physics could be of fundamental importance in MRI turbulence (Squire & Bhattacharjee 2014).« less

Fully three-dimensional ideal magnetohydrodynamic stability analysis of low- n modes and Mercier modes in stellarators

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fu, G.Y.; Cooper, W.A.; Gruber, R.

1992-06-01

The TERPSICHORE three-dimensional linear ideal magnetohydrodynamic (MHD) stability code ({ital Theory} {ital of} {ital Fusion} {ital Plasmas}, Proceedings of the Joint Varenna--Lausanne International Workshop, Chexbres, Switzerland, 1988 (Editrice Compositori, Bologna, Italy, 1989), p. 93; {ital Controlled} {ital Fusion} {ital and} {ital Plasma} {ital Heating}, Proceedings of the 17th European Conference, Amsterdam, The Netherlands (European Physical Society, Petit-Lancy, Switzerland, 1990), Vol. 14B, Part II, p. 931; {ital Theory} {ital of} {ital Fusion} {ital Plasmas}, Proceedings of the Joint Varenna--Lausanne International Workshop, Valla Monastero, Varenna, Italy, 1990 (Editrice Compositori, Bologna, Italy, 1990), p. 655) has been extended to the full MHD equations.more » The new code is used to calculate the physical growth rates of nonlocal low-{ital n} modes for {ital l}=2 torsatron configurations. A comprehensive investigation of the relation between the Mercier modes and the low-{ital n} modes has been performed. The unstable localized low-{ital n} modes are found to be correlated with the Mercier criterion. Finite growth rates of the low-{ital n} modes correspond to finite values of the Mercier criterion parameter. Near the Mercier marginal stability boundary, the low-{ital n} modes tend to be weakly unstable with very small growth rates. However, the stability of global-type low-{ital n} modes is found to be decorrelated from that of Mercier modes. The low-{ital n} modes with global radial structures can be more stable or more unstable than Mercier modes.« less

Energetic-ion-driven global instabilities in stellarator/helical plasmas and comparison with tokamak plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Toi, K.; Ogawa, K.; Isobe, M.

2011-01-01

Comprehensive understanding of energetic-ion-driven global instabilities such as Alfven eigenmodes (AEs) and their impact on energetic ions and bulk plasma is crucially important for tokamak and stellarator/helical plasmas and in the future for deuterium-tritium (DT) burning plasma experiments. Various types of global modes and their associated enhanced energetic ion transport are commonly observed in toroidal plasmas. Toroidicity-induced AEs and ellipticity-induced AEs, whose gaps are generated through poloidal mode coupling, are observed in both tokamak and stellarator/helical plasmas. Global AEs and reversed shear AEs, where toroidal couplings are not as dominant were also observed in those plasmas. Helicity induced AEs thatmore » exist only in 3D plasmas are observed in the large helical device (LHD) and Wendelstein 7 Advanced Stellarator plasmas. In addition, the geodesic acoustic mode that comes from plasma compressibility is destabilized by energetic ions in both tokamak and LHD plasmas. Nonlinear interaction of these modes and their influence on the confinement of the bulk plasma as well as energetic ions are observed in both plasmas. In this paper, the similarities and differences in these instabilities and their consequences for tokamak and stellarator/helical plasmas are summarized through comparison with the data sets obtained in LHD. In particular, this paper focuses on the differences caused by the rotational transform profile and the 2D or 3D geometrical structure of the plasma equilibrium. Important issues left for future study are listed.« less

Integrated tuned vibration absorbers: a theoretical study.

PubMed

Gardonio, Paolo; Zilletti, Michele

2013-11-01

This article presents a simulation study on two integrated tuned vibration absorbers (TVAs) designed to control the global flexural vibration of lightly damped thin structures subject to broad frequency band disturbances. The first one consists of a single axial switching TVA composed by a seismic mass mounted on variable axial spring and damper elements so that the characteristic damping and natural frequency of the absorber can be switched iteratively to control the resonant response of three flexural modes of the hosting structure. The second one consists of a single three-axes TVA composed by a seismic mass mounted on axial and rotational springs and dampers, which are arranged in such a way that the suspended mass is characterized by uncoupled heave and pitch-rolling vibrations. In this case the three damping and natural frequency parameters of the absorber are tuned separately to control three flexural modes of the hosting structure. The simulation study shows that the proposed single-unit absorbers produce, respectively, 5.3 and 8.7 dB reductions of the global flexural vibration of a rectangular plate between 20 and 120 Hz.

Mode-locking in advection-reaction-diffusion systems: An invariant manifold perspective

NASA Astrophysics Data System (ADS)

Locke, Rory A.; Mahoney, John R.; Mitchell, Kevin A.

2018-01-01

Fronts propagating in two-dimensional advection-reaction-diffusion systems exhibit a rich topological structure. When the underlying fluid flow is periodic in space and time, the reaction front can lock to the driving frequency. We explain this mode-locking phenomenon using the so-called burning invariant manifolds (BIMs). In fact, the mode-locked profile is delineated by a BIM attached to a relative periodic orbit (RPO) of the front element dynamics. Changes in the type (and loss) of mode-locking can be understood in terms of local and global bifurcations of the RPOs and their BIMs. We illustrate these concepts numerically using a chain of alternating vortices in a channel geometry.

Three-Dimensional Structure of Boundary Layers in Transition to Turbulence.

DTIC Science & Technology

1987-06-24

a general parabolic velo- city distribution (4.4) Discussion of the relevance of these motions for the forced situation in the laminar sublayer of...areas of energy transfer with the symmetries of the various peak-valley splitting and subharmonic modes. Analysis of the global energy transfer over a ...expansion. At third order, we obtain a Landau con- stant that accounts for those nonlinear effects on the growth rate of the 3D mode that directly originate

Nonlinear motion of cantilevered SWNT and Its Meaning to Phonon Dynamics

NASA Astrophysics Data System (ADS)

Koh, Heeyuen; Cannon, James; Chiashi, Shohei; Shiomi, Junichiro; Maruyama, Shigeo

2013-03-01

Based on the finding that the lowest frequency mode of cantilevered SWNT is described by the continuum beam theory in frequency domain, we considered its effect of the symmetric structure for the coupling of orthogonal transverse modes to explain the nonlinear motion of free thermal vibration. This nonlinear motion calculated by our molecular dynamics simulation, once regarded as noise, is observed to have the periodic order with duffing and beating, which is dependent on aspect ratio and temperature. It could be dictated by the governing equation from the Green Lagrangian strain tensor. The nonlinear beam equation from strain tensor described the motion well for various models which has different aspect ratio in molecular dynamics simulation. Since this motion is nothing but the interaction between 2nd mode of radial, tangential mode and 1st longitudinal mode, it was found that Green Lagrangian strain tensor is capable to deal such coupling. The free thermal motion of suspended SWNT is also considered without temperature gradient. The Q factor measured by this theoretical analysis will be discussed. Part of this work was financially supported by Grant-in-Aid for Scientific Research (19054003 and 22226006), and Global COE Program 'Global Center for Excellence for Mechanical Systems Innovation'

Ionospheric current source modeling and global geomagnetic induction using ground geomagnetic observatory data

USGS Publications Warehouse

Sun, Jin; Kelbert, Anna; Egbert, G.D.

2015-01-01

Long-period global-scale electromagnetic induction studies of deep Earth conductivity are based almost exclusively on magnetovariational methods and require accurate models of external source spatial structure. We describe approaches to inverting for both the external sources and three-dimensional (3-D) conductivity variations and apply these methods to long-period (T≥1.2 days) geomagnetic observatory data. Our scheme involves three steps: (1) Observatory data from 60 years (only partly overlapping and with many large gaps) are reduced and merged into dominant spatial modes using a scheme based on frequency domain principal components. (2) Resulting modes are inverted for corresponding external source spatial structure, using a simplified conductivity model with radial variations overlain by a two-dimensional thin sheet. The source inversion is regularized using a physically based source covariance, generated through superposition of correlated tilted zonal (quasi-dipole) current loops, representing ionospheric source complexity smoothed by Earth rotation. Free parameters in the source covariance model are tuned by a leave-one-out cross-validation scheme. (3) The estimated data modes are inverted for 3-D Earth conductivity, assuming the source excitation estimated in step 2. Together, these developments constitute key components in a practical scheme for simultaneous inversion of the catalogue of historical and modern observatory data for external source spatial structure and 3-D Earth conductivity.

Terminal Sliding Mode Tracking Controller Design for Automatic Guided Vehicle

NASA Astrophysics Data System (ADS)

Chen, Hongbin

2018-03-01

Based on sliding mode variable structure control theory, the path tracking problem of automatic guided vehicle is studied, proposed a controller design method based on the terminal sliding mode. First of all, through analyzing the characteristics of the automatic guided vehicle movement, the kinematics model is presented. Then to improve the traditional expression of terminal sliding mode, design a nonlinear sliding mode which the convergence speed is faster than the former, verified by theoretical analysis, the design of sliding mode is steady and fast convergence in the limited time. Finally combining Lyapunov method to design the tracking control law of automatic guided vehicle, the controller can make the automatic guided vehicle track the desired trajectory in the global sense as well as in finite time. The simulation results verify the correctness and effectiveness of the control law.

A veterinary anatomy tutoring system.

PubMed

Theodoropoulos, G; Loumos, V; Antonopoulos, J

1994-02-14

A veterinary anatomy tutoring system was developed by using Knowledge Pro, an object-oriented software development tool with hypermedia capabilities, and MS Access, a relational database. Communication between them is facilitated by using the Structured Query Language (SQL). The architecture of the system is based on knowledge sets, each of which covers four different descriptions of an organ, namely gross anatomy (general description), gross anatomy (comparative features), histology, and embryology, which constitute the knowledge units. These knowledge units are linked with three global variables that define the animals, the topographies, and the system to which this organ belongs, creating three data-bases. These three data-bases are interrelated through the organ field in order to establish a relational model. This system allows versatility in the student's navigation through the information space by offering different modes for information location and presentation. These include course mode, review mode, reference mode, dissection mode, and comparison mode. In addition, the system provides a self-evaluation mode.

Synchronous Motions Across the Instrumental Climate Record

NASA Astrophysics Data System (ADS)

Carl, Peter

The Earth's climate system bears a rich variety of feedback mechanisms that may give rise to complex, evolving modal structures under internal and external control. Various types of synchronization may be identified in the system's motion when looking at representative time series of the instrumental period through the glasses of an advanced technique of sparse data approximation, the Matching Pursuit (MP) approach. To disentangle the emerging network of oscillatory modes to the degree that climate dynamics turns out to be separable, a large dictionary of "Gaussian logons," i.e. frequency modulated (FM) Gabor atoms, is applied. Though the extracted modes make up linear decompositions, this flexible analyzing signal matches highly nonlinear waveforms. Univariate analyses over the period 1870-1997 are presented of a set of customary time series in annual resolution, comprising global and regional climate, central European synoptic systems, German precipitation, and runoff of the Elbe river near Dresden. All the evidence from this first-generation MP-FM study, obtained in subsequent multivariate syntheses, points to dynamically excited regimes of an organized yet complex climate system under permanent change—perhaps a (pre)chaotic one at centennial timescales, suggesting a "chaos control" perspective on global climate dynamics and change. Findings and conclusions include, among others, internal structure of reconstructed insolation, the episodic nature of global warming as reflected in multidecadal temperature modes, their swarm of "interdomain" companions across the whole system that unveils an unknown regime character of interannual climate dynamics, and the apparent onset early in the 1990s of the present thermal stagnation.

Mode selective generation of guided waves by systematic optimization of the interfacial shear stress profile

NASA Astrophysics Data System (ADS)

Yazdanpanah Moghadam, Peyman; Quaegebeur, Nicolas; Masson, Patrice

2015-01-01

Piezoelectric transducers are commonly used in structural health monitoring systems to generate and measure ultrasonic guided waves (GWs) by applying interfacial shear and normal stresses to the host structure. In most cases, in order to perform damage detection, advanced signal processing techniques are required, since a minimum of two dispersive modes are propagating in the host structure. In this paper, a systematic approach for mode selection is proposed by optimizing the interfacial shear stress profile applied to the host structure, representing the first step of a global optimization of selective mode actuator design. This approach has the potential of reducing the complexity of signal processing tools as the number of propagating modes could be reduced. Using the superposition principle, an analytical method is first developed for GWs excitation by a finite number of uniform segments, each contributing with a given elementary shear stress profile. Based on this, cost functions are defined in order to minimize the undesired modes and amplify the selected mode and the optimization problem is solved with a parallel genetic algorithm optimization framework. Advantages of this method over more conventional transducers tuning approaches are that (1) the shear stress can be explicitly optimized to both excite one mode and suppress other undesired modes, (2) the size of the excitation area is not constrained and mode-selective excitation is still possible even if excitation width is smaller than all excited wavelengths, and (3) the selectivity is increased and the bandwidth extended. The complexity of the optimal shear stress profile obtained is shown considering two cost functions with various optimal excitation widths and number of segments. Results illustrate that the desired mode (A0 or S0) can be excited dominantly over other modes up to a wave power ratio of 1010 using an optimal shear stress profile.

Investigating the radial structure of axisymmetric fluctuations in the TCV tokamak with local and global gyrokinetic GENE simulations

NASA Astrophysics Data System (ADS)

Merlo, G.; Brunner, S.; Huang, Z.; Coda, S.; Görler, T.; Villard, L.; Bañón Navarro, A.; Dominski, J.; Fontana, M.; Jenko, F.; Porte, L.; Told, D.

2018-03-01

Axisymmetric (n = 0) density fluctuations measured in the TCV tokamak are observed to possess a frequency f 0 which is either varying (radially dispersive oscillations) or a constant over a large fraction of the plasma minor radius (radially global oscillations) as reported in a companion paper (Z Huang et al, this issue). Given that f 0 scales with the sound speed and given the poloidal structure of density fluctuations, these oscillations were interpreted as Geodesic Acoustic Modes, even though f 0 is in fact smaller than the local linear GAM frequency {f}{GAM}. In this work we employ the Eulerian gyrokinetic code GENE to simulate TCV relevant conditions and investigate the nature and properties of these oscillations, in particular their relation to the safety factor profile. Local and global simulations are carried out and a good qualitative agreement is observed between experiments and simulations. By varying also the plasma temperature and density profiles, we conclude that a variation of the edge safety factor alone is not sufficient to induce a transition from global to radially inhomogeneous oscillations, as was initially suggested by experimental results. This transition appears instead to be the combined result of variations in the different plasma profiles, collisionality and finite machine size effects. Simulations also show that radially global GAM-like oscillations can be observed in all fluxes and fluctuation fields, suggesting that they are the result of a complex nonlinear process involving also finite toroidal mode numbers and not just linear global GAM eigenmodes.

Stability of Lobed Balloons

NASA Technical Reports Server (NTRS)

Ball, Danny (Technical Monitor); Pagitz, M.; Pellegrino, Xu S.

2004-01-01

This paper presents a computational study of the stability of simple lobed balloon structures. Two approaches are presented, one based on a wrinkled material model and one based on a variable Poisson s ratio model that eliminates compressive stresses iteratively. The first approach is used to investigate the stability of both a single isotensoid and a stack of four isotensoids, for perturbations of in.nitesimally small amplitude. It is found that both structures are stable for global deformation modes, but unstable for local modes at su.ciently large pressure. Both structures are stable if an isotropic model is assumed. The second approach is used to investigate the stability of the isotensoid stack for large shape perturbations, taking into account contact between di.erent surfaces. For this structure a distorted, stable configuration is found. It is also found that the volume enclosed by this con.guration is smaller than that enclosed by the undistorted structure.

Origami tubes assembled into stiff, yet reconfigurable structures and metamaterials.

PubMed

Filipov, Evgueni T; Tachi, Tomohiro; Paulino, Glaucio H

2015-10-06

Thin sheets have long been known to experience an increase in stiffness when they are bent, buckled, or assembled into smaller interlocking structures. We introduce a unique orientation for coupling rigidly foldable origami tubes in a "zipper" fashion that substantially increases the system stiffness and permits only one flexible deformation mode through which the structure can deploy. The flexible deployment of the tubular structures is permitted by localized bending of the origami along prescribed fold lines. All other deformation modes, such as global bending and twisting of the structural system, are substantially stiffer because the tubular assemblages are overconstrained and the thin sheets become engaged in tension and compression. The zipper-coupled tubes yield an unusually large eigenvalue bandgap that represents the unique difference in stiffness between deformation modes. Furthermore, we couple compatible origami tubes into a variety of cellular assemblages that can enhance mechanical characteristics and geometric versatility, leading to a potential design paradigm for structures and metamaterials that can be deployed, stiffened, and tuned. The enhanced mechanical properties, versatility, and adaptivity of these thin sheet systems can provide practical solutions of varying geometric scales in science and engineering.

Origami tubes assembled into stiff, yet reconfigurable structures and metamaterials

PubMed Central

Filipov, Evgueni T.; Tachi, Tomohiro; Paulino, Glaucio H.

2015-01-01

Thin sheets have long been known to experience an increase in stiffness when they are bent, buckled, or assembled into smaller interlocking structures. We introduce a unique orientation for coupling rigidly foldable origami tubes in a “zipper” fashion that substantially increases the system stiffness and permits only one flexible deformation mode through which the structure can deploy. The flexible deployment of the tubular structures is permitted by localized bending of the origami along prescribed fold lines. All other deformation modes, such as global bending and twisting of the structural system, are substantially stiffer because the tubular assemblages are overconstrained and the thin sheets become engaged in tension and compression. The zipper-coupled tubes yield an unusually large eigenvalue bandgap that represents the unique difference in stiffness between deformation modes. Furthermore, we couple compatible origami tubes into a variety of cellular assemblages that can enhance mechanical characteristics and geometric versatility, leading to a potential design paradigm for structures and metamaterials that can be deployed, stiffened, and tuned. The enhanced mechanical properties, versatility, and adaptivity of these thin sheet systems can provide practical solutions of varying geometric scales in science and engineering. PMID:26351693

Origami tubes assembled into stiff, yet reconfigurable structures and metamaterials

NASA Astrophysics Data System (ADS)

Filipov, Evgueni T.; Tachi, Tomohiro; Paulino, Glaucio H.

2015-10-01

Thin sheets have long been known to experience an increase in stiffness when they are bent, buckled, or assembled into smaller interlocking structures. We introduce a unique orientation for coupling rigidly foldable origami tubes in a "zipper" fashion that substantially increases the system stiffness and permits only one flexible deformation mode through which the structure can deploy. The flexible deployment of the tubular structures is permitted by localized bending of the origami along prescribed fold lines. All other deformation modes, such as global bending and twisting of the structural system, are substantially stiffer because the tubular assemblages are overconstrained and the thin sheets become engaged in tension and compression. The zipper-coupled tubes yield an unusually large eigenvalue bandgap that represents the unique difference in stiffness between deformation modes. Furthermore, we couple compatible origami tubes into a variety of cellular assemblages that can enhance mechanical characteristics and geometric versatility, leading to a potential design paradigm for structures and metamaterials that can be deployed, stiffened, and tuned. The enhanced mechanical properties, versatility, and adaptivity of these thin sheet systems can provide practical solutions of varying geometric scales in science and engineering.

Assessment of body mapping sportswear using a manikin operated in constant temperature mode and thermoregulatory model control mode

NASA Astrophysics Data System (ADS)

Wang, Faming; Del Ferraro, Simona; Molinaro, Vincenzo; Morrissey, Matthew; Rossi, René

2014-09-01

Regional sweating patterns and body surface temperature differences exist between genders. Traditional sportswear made from one material and/or one fabric structure has a limited ability to provide athletes sufficient local wear comfort. Body mapping sportswear consists of one piece of multiple knit structure fabric or of different fabric pieces that may provide athletes better wear comfort. In this study, the `modular' body mapping sportswear was designed and subsequently assessed on a `Newton' type sweating manikin that operated in both constant temperature mode and thermophysiological model control mode. The performance of the modular body mapping sportswear kit and commercial products were also compared. The results demonstrated that such a modular body mapping sportswear kit can meet multiple wear/thermal comfort requirements in various environmental conditions. All body mapping clothing (BMC) presented limited global thermophysiological benefits for the wearers. Nevertheless, BMC showed evident improvements in adjusting local body heat exchanges and local thermal sensations.

Assessment of body mapping sportswear using a manikin operated in constant temperature mode and thermoregulatory model control mode.

PubMed

Wang, Faming; Del Ferraro, Simona; Molinaro, Vincenzo; Morrissey, Matthew; Rossi, René

2014-09-01

Regional sweating patterns and body surface temperature differences exist between genders. Traditional sportswear made from one material and/or one fabric structure has a limited ability to provide athletes sufficient local wear comfort. Body mapping sportswear consists of one piece of multiple knit structure fabric or of different fabric pieces that may provide athletes better wear comfort. In this study, the 'modular' body mapping sportswear was designed and subsequently assessed on a 'Newton' type sweating manikin that operated in both constant temperature mode and thermophysiological model control mode. The performance of the modular body mapping sportswear kit and commercial products were also compared. The results demonstrated that such a modular body mapping sportswear kit can meet multiple wear/thermal comfort requirements in various environmental conditions. All body mapping clothing (BMC) presented limited global thermophysiological benefits for the wearers. Nevertheless, BMC showed evident improvements in adjusting local body heat exchanges and local thermal sensations.

Dynamic Transmission of Protein Allostery without Structural Change: Spatial Pathways or Global Modes?

PubMed Central

McLeish, Tom C.B.; Cann, Martin J.; Rodgers, Thomas L.

2015-01-01

We examine the contrast between mechanisms for allosteric signaling that involve structural change, and those that do not, from the perspective of allosteric pathways. In particular we treat in detail the case of fluctuation-allostery by which amplitude modulation of the thermal fluctuations of the elastic normal modes conveys the allosteric signal, and address the question of what an allosteric pathway means in this case. We find that a perturbation theory of thermal elastic solids and nonperturbative approach (by super-coarse-graining elasticity into internal bending modes) have opposite signatures in their structure of correlated pathways. We illustrate the effect from analysis of previous results from GlxR of Corynebacterium glutamicum, an example of the CRP/FNR transcription family of allosteric homodimers. We find that the visibility of both correlated pathways and disconnected sites of correlated motion in this protein suggests that mechanisms of local elastic stretch and bend are recruited for the purpose of creating and controlling allosteric cooperativity. PMID:26338443

Global snowfall: A combined CloudSat, GPM, and reanalysis perspective.

NASA Astrophysics Data System (ADS)

Milani, Lisa; Kulie, Mark S.; Skofronick-Jackson, Gail; Munchak, S. Joseph; Wood, Norman B.; Levizzani, Vincenzo

2017-04-01

Quantitative global snowfall estimates derived from multi-year data records will be presented to highlight recent advances in high latitude precipitation retrievals using spaceborne observations. More specifically, the analysis features the 2006-2016 CloudSat Cloud Profiling Radar (CPR) and the 2014-2016 Global Precipitation (GPM) Microwave Imager (GMI) and Dual-frequency Precipitation Radar (DPR) observational datasets and derived products. The ERA-Interim reanalysis dataset is also used to define the meteorological context and an independent combined modeling/observational evaluation dataset. An overview is first provided of CloudSat CPR-derived results that have stimulated significant recent research regarding global snowfall, including seasonal analyses of unique snowfall modes. GMI and DPR global annual snowfall retrievals are then evaluated against the CloudSat estimates to highlight regions where the datasets provide both consistent and diverging snowfall estimates. A hemispheric seasonal analysis for both datasets will also be provided. These comparisons aim at providing a unified global snowfall characterization that leverages the respective instrument's strengths. Attention will also be devoted to regions around the globe that experience unique snowfall modes. For instance, CloudSat has demonstrated an ability to effectively discern snowfall produced by shallow cumuliform cloud structures (e.g., lake/ocean-induced convective snow produced by air/water interactions associated with seasonal cold air outbreaks). The CloudSat snowfall database also reveals prevalent seasonal shallow cumuliform snowfall trends over climate-sensitive regions like the Greenland Ice Sheet. Other regions with unique snowfall modes, such as the US East Coast winter storm track zone that experiences intense snowfall rates directly associated with strong low pressure systems, will also be highlighted to demonstrate GPM's observational effectiveness. Linkages between CloudSat and GPM global snowfall analyses and independent ERA-Interim datasets will also be presented as a final evaluation exercise.

Andreev rectifier: A nonlocal conductance signature of topological phase transitions

NASA Astrophysics Data System (ADS)

Rosdahl, T. Ö.; Vuik, A.; Kjaergaard, M.; Akhmerov, A. R.

2018-01-01

The proximity effect in hybrid superconductor-semiconductor structures, crucial for realizing Majorana edge modes, is complicated to control due to its dependence on many unknown microscopic parameters. In addition, defects can spoil the induced superconductivity locally in the proximitized system, which complicates measuring global properties with a local probe. We show how to use the nonlocal conductance between two spatially separated leads to probe three global properties of a proximitized system: the bulk superconducting gap, the induced gap, and the induced coherence length. Unlike local conductance spectroscopy, nonlocal conductance measurements distinguish between nontopological zero-energy modes localized around potential inhomogeneities, and true Majorana edge modes that emerge in the topological phase. In addition, we find that the nonlocal conductance is an odd function of bias at the topological phase transition, acting as a current rectifier in the low-bias limit. More generally, we identify conditions for crossed Andreev reflection to dominate the nonlocal conductance and show how to design a Cooper pair splitter in the open regime.

Global observations of magnetospheric high‐m poloidal waves during the 22 June 2015 magnetic storm

PubMed Central

Chi, P. J.; Strangeway, R. J.; Russell, C. T.; Slavin, J. A.; Takahashi, K.; Singer, H. J.; Anderson, B. J.; Bromund, K.; Fischer, D.; Kepko, E. L.; Magnes, W.; Nakamura, R.; Plaschke, F.; Torbert, R. B.

2017-01-01

Abstract We report global observations of high‐m poloidal waves during the recovery phase of the 22 June 2015 magnetic storm from a constellation of widely spaced satellites of five missions including Magnetospheric Multiscale (MMS), Van Allen Probes, Time History of Events and Macroscale Interactions during Substorm (THEMIS), Cluster, and Geostationary Operational Environmental Satellites (GOES). The combined observations demonstrate the global spatial extent of storm time poloidal waves. MMS observations confirm high azimuthal wave numbers (m ~ 100). Mode identification indicates the waves are associated with the second harmonic of field line resonances. The wave frequencies exhibit a decreasing trend as L increases, distinguishing them from the single‐frequency global poloidal modes normally observed during quiet times. Detailed examination of the instantaneous frequency reveals discrete spatial structures with step‐like frequency changes along L. Each discrete L shell has a steady wave frequency and spans about 1 R E, suggesting that there exist a discrete number of drift‐bounce resonance regions across L shells during storm times. PMID:28713180

Upper Mantle Shear Wave Structure Beneath North America From Multi-mode Surface Wave Tomography

NASA Astrophysics Data System (ADS)

Yoshizawa, K.; Ekström, G.

2008-12-01

The upper mantle structure beneath the North American continent has been investigated from measurements of multi-mode phase speeds of Love and Rayleigh waves. To estimate fundamental-mode and higher-mode phase speeds of surface waves from a single seismogram at regional distances, we have employed a method of nonlinear waveform fitting based on a direct model-parameter search using the neighbourhood algorithm (Yoshizawa & Kennett, 2002). The method of the waveform analysis has been fully automated by employing empirical quantitative measures for evaluating the accuracy/reliability of estimated multi-mode phase dispersion curves, and thus it is helpful in processing the dramatically increasing numbers of seismic data from the latest regional networks such as USArray. As a first step toward modeling the regional anisotropic shear-wave velocity structure of the North American upper mantle with extended vertical resolution, we have applied the method to long-period three-component records of seismic stations in North America, which mostly comprise the GSN and US regional networks as well as the permanent and transportable USArray stations distributed by the IRIS DMC. Preliminary multi-mode phase-speed models show large-scale patterns of isotropic heterogeneity, such as a strong velocity contrast between the western and central/eastern United States, which are consistent with the recent global and regional models (e.g., Marone, et al. 2007; Nettles & Dziewonski, 2008). We will also discuss radial anisotropy of shear wave speed beneath North America from multi-mode dispersion measurements of Love and Rayleigh waves.

Cosmological texture is incompatible with Planck-scale physics

NASA Technical Reports Server (NTRS)

Holman, Richard; Hsu, Stephen D. H.; Kolb, Edward W.; Watkins, Richard; Widrow, Lawrence M.

1992-01-01

Nambu-Goldstone modes are sensitive to the effects of physics at energies comparable to the scale of spontaneous symmetry breaking. We show that as a consequence of this the global texture proposal for structure formation requires rather severe assumptions about the nature of physics at the Planck scale.

Hybrid simulation of fishbone instabilities in the EAST tokamak

DOE PAGES

Shen, Wei; Wang, Feng; Fu, G. Y.; ...

2017-08-11

Hybrid simulations with the global kinetic-magnetohydrodynamic (MHD) code M3D-K have been carried out to investigate the linear stability and nonlinear dynamics of beam-driven fishbone in the experimental advanced superconducting tokamak (EAST) experiment. Linear simulations show that a low frequency fishbone instability is excited at experimental value of beam ion pressure. The mode is mainly driven by low energy beam ions via precessional resonance. Our results are consistent with the experimental measurement with respect to mode frequency and mode structure. When the beam ion pressure is increased to exceed a critical value, the low frequency mode transits to a beta-induced Alfvenmore » eigenmode (BAE) with much higher frequency. This BAE is driven by higher energy beam ions. Nonlinear simulations show that the frequency of the low frequency fishbone chirps up and down with corresponding hole-clump structures in phase space, consistent with the Berk-Breizman theory. In addition to the low frequency mode, the high frequency BAE is excited during the nonlinear evolution. Furthermore, for the transient case of beam pressure fraction where the low and high frequency modes are simultaneously excited in the linear phase, only one dominant mode appears in the nonlinear phase with frequency jumps up and down during nonlinear evolution.« less

Torsional Alfv\\xE9n resonances as an efficient damping mechanism for non-radial oscillations in red giant stars

NASA Astrophysics Data System (ADS)

Loi, Shyeh Tjing; Papaloizou, John C. B.

2017-05-01

Stars are self-gravitating fluids in which pressure, buoyancy, rotation and magnetic fields provide the restoring forces for global modes of oscillation. Pressure and buoyancy energetically dominate, while rotation and magnetism are generally assumed to be weak perturbations and often ignored. However, observations of anomalously weak dipole mode amplitudes in red giant stars suggest that a substantial fraction of these are subject to an additional source of damping localized to their core region, with indirect evidence pointing to the role of a deeply buried magnetic field. It is also known that in many instances, the gravity-mode character of affected modes is preserved, but so far, no effective damping mechanism has been proposed that accommodates this aspect. Here we present such a mechanism, which damps the oscillations of stars harbouring magnetised cores via resonant interactions with standing Alfvén modes of high harmonic index. The damping rates produced by this mechanism are quantitatively on par with those associated with turbulent convection, and in the range required to explain observations, for realistic stellar models and magnetic field strengths. Our results suggest that magnetic fields can provide an efficient means of damping stellar oscillations without needing to disrupt the internal structure of the modes, and lay the groundwork for an extension of the theory of global stellar oscillations that incorporates these effects.

Investigating the radial structure of axisymmetric fluctuations in the TCV tokamak with local and global gyrokinetic GENE simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merlo, Gabriele; Brunner, Stephan; Huang, Zhouji

Axisymmetric (n=0) density fluctuations measured in the TCV tokamak are observed to possess a frequency f₀ which is either varying (radially dispersive oscillations) or a constant over a large fraction of the plasma minor radius (radially global oscillations) as reported in a companion paper [Z. Huang et al., this issue]. Given that f₀ scales with the sound speed and given the poloidal structure of density fluctuations, these oscillations were interpreted as Geodesic Acoustic Modes, even though f₀ is in fact smaller than the local linear GAM frequency f_GAM . In this work we employ the Eulerian gyrokinetic code GENE tomore » simulate TCV relevant conditions and investigate the nature properties of these oscillations, in particular their relation to the safety factor profile. Local and global simulations are carried out and a good qualitative agreement is observed between experiments and simulations. By varying also the plasma temperature and density profiles, we conclude that a variation of the edge safety factor alone is not sufficient to induce a transition from global to radially inhomogeneous oscillations, as was initially suggested by experimental results. This transition appears instead to be the combined result of variations in the different plasma profiles, collisionality and finite machine size effects. In conclusion, simulations also show that radially global GAM-like oscillations can be observed in all fluxes and fluctuation fields, suggesting that they are the result of a complex nonlinear process involving also finite toroidal mode numbers and not just linear global GAM eigenmodes.« less

Investigating the radial structure of axisymmetric fluctuations in the TCV tokamak with local and global gyrokinetic GENE simulations

DOE PAGES

Merlo, Gabriele; Brunner, Stephan; Huang, Zhouji; ...

2017-12-19

Axisymmetric (n=0) density fluctuations measured in the TCV tokamak are observed to possess a frequency f₀ which is either varying (radially dispersive oscillations) or a constant over a large fraction of the plasma minor radius (radially global oscillations) as reported in a companion paper [Z. Huang et al., this issue]. Given that f₀ scales with the sound speed and given the poloidal structure of density fluctuations, these oscillations were interpreted as Geodesic Acoustic Modes, even though f₀ is in fact smaller than the local linear GAM frequency f_GAM . In this work we employ the Eulerian gyrokinetic code GENE tomore » simulate TCV relevant conditions and investigate the nature properties of these oscillations, in particular their relation to the safety factor profile. Local and global simulations are carried out and a good qualitative agreement is observed between experiments and simulations. By varying also the plasma temperature and density profiles, we conclude that a variation of the edge safety factor alone is not sufficient to induce a transition from global to radially inhomogeneous oscillations, as was initially suggested by experimental results. This transition appears instead to be the combined result of variations in the different plasma profiles, collisionality and finite machine size effects. In conclusion, simulations also show that radially global GAM-like oscillations can be observed in all fluxes and fluctuation fields, suggesting that they are the result of a complex nonlinear process involving also finite toroidal mode numbers and not just linear global GAM eigenmodes.« less

In situ damage detection in frame structures through coupled response measurements

NASA Astrophysics Data System (ADS)

Liu, D.; Gurgenci, H.; Veidt, M.

2004-05-01

Due to the existence of global modes and local modes of the neighbouring members, damage detection on a structure is more challenging than damage on isolated beams. Detection of an artificial circumferential crack on a joint in a frame-like welded structure is studied in this paper using coupled response measurements. Similarity to real engineering structures is maintained in the fabrication of the test frame. Both the chords and the branch members have hollow sections and the branch members have smaller sizes. The crack is created by a hacksaw on a joint where a branch meets the chord. The methodology is first demonstrated on a single hollow section beam. The test results are then presented for the damaged and undamaged frame. The existence of the damage is clearly observable from the experimental results. It is suggested that this approach offers the potential to detect damage in welded structures such as cranes, mining equipment, steel-frame bridges, naval and offshore structures.

Effects of radial electric fields on linear ITG instabilities in W7-X and LHD

NASA Astrophysics Data System (ADS)

Riemann, J.; Kleiber, R.; Borchardt, M.

2016-07-01

The impact of radial electric fields on the properties of linear ion-temperature-gradient (ITG) modes in stellarators is studied. Numerical simulations have been carried out with the global particle-in-cell (PIC) code EUTERPE, modelling the behaviour of ITG modes in Wendelstein 7-X and an LHD-like configuration. In general, radial electric fields seem to lead to a reduction of ITG instability growth, which can be related to the action of an induced E× B -drift. Focus is set on the modification of mode properties (frequencies, power spectrum, spatial structure and localization) to understand the observed growth rates as the result of competing stabilizing mechanisms.

Spatially resolved measurements of two-dimensional turbulent structures in DIII-D plasmas

DOE PAGES

Zemedkun, Samuel E.; Che, S.; Chen, Y.; ...

2015-12-21

Here, two-dimensional observations of spatially-coherent electron temperature fluctuations at drift wave scales (k ~1 cm -1) have been made using the electron cyclotron emission imaging (ECEI) diagnostic on the DIII-D tokamak. These measurements enable the extraction of spectral properties, including poloidal dispersion relations. Temperature fluctuation levels are found to be ˜ T e/< T e > = 1.2%, and the phase velocity of the fluctuations is found to be constant across frequencies, consistent with modes having real frequencies low compared to the rotation-induced Doppler shifts. Comparisons with radially global linear gyrokinetic simulations suggest that the observed modes may be trappedmore » electron modes (TEM).« less

Global Health Teaching in India: A Curricular Landscape

PubMed Central

Pati, Sanghamitra; Sinha, Rajeshwari; Panda, Meely; Pati, Sandipana; Sharma, Anjali; Zodpey, Sanjay

2017-01-01

Today, health has transcended national boundaries and become more multifaceted. Global health has evolved as a new paradigm and is recently being identified as a thrust area now in India. Despite an existing need for a standardized global health curriculum, there is little information available on its education and curriculum in medical and health education space. In the Indian context, we are yet to have a fuller picture of the current status, including, content, structure, selection, teaching methods of global health, and how students are evaluated in India. The objective of this study was to map courses relating to studies on global health in India and analyze its mode of delivery. A detailed Internet search was carried out to identify global health courses and analyzed for: (i) whether global health is a part of the teaching curriculum, (ii) mode of teaching, (iii) broad contents, (iv) instructional formats, (v) assessment, and (vi) selection process. It was found that delivery of global health education in India was fragmented with limited focus at the undergraduate and postgraduate levels. Global health teaching was largely based on certificate courses or online courses, with hardly any institutions imparting a distinct global health education program. There is also no definite specification as to which institutes can impart teaching on global health education and what the specific eligibility requirements are. Our analysis suggests that efforts should be directed toward integrating global health education into broader public health curriculum. At the same time, the need for generation of global health leaders, creation of a common forum for addressing merits and demerits of global health issues, as well as creation of more opportunities for placements are recognized. PMID:29021978

Global Health Teaching in India: A Curricular Landscape.

PubMed

Pati, Sanghamitra; Sinha, Rajeshwari; Panda, Meely; Pati, Sandipana; Sharma, Anjali; Zodpey, Sanjay

2017-01-01

Today, health has transcended national boundaries and become more multifaceted. Global health has evolved as a new paradigm and is recently being identified as a thrust area now in India. Despite an existing need for a standardized global health curriculum, there is little information available on its education and curriculum in medical and health education space. In the Indian context, we are yet to have a fuller picture of the current status, including, content, structure, selection, teaching methods of global health, and how students are evaluated in India. The objective of this study was to map courses relating to studies on global health in India and analyze its mode of delivery. A detailed Internet search was carried out to identify global health courses and analyzed for: (i) whether global health is a part of the teaching curriculum, (ii) mode of teaching, (iii) broad contents, (iv) instructional formats, (v) assessment, and (vi) selection process. It was found that delivery of global health education in India was fragmented with limited focus at the undergraduate and postgraduate levels. Global health teaching was largely based on certificate courses or online courses, with hardly any institutions imparting a distinct global health education program. There is also no definite specification as to which institutes can impart teaching on global health education and what the specific eligibility requirements are. Our analysis suggests that efforts should be directed toward integrating global health education into broader public health curriculum. At the same time, the need for generation of global health leaders, creation of a common forum for addressing merits and demerits of global health issues, as well as creation of more opportunities for placements are recognized.

Decentralized modal identification using sparse blind source separation

NASA Astrophysics Data System (ADS)

Sadhu, A.; Hazra, B.; Narasimhan, S.; Pandey, M. D.

2011-12-01

Popular ambient vibration-based system identification methods process information collected from a dense array of sensors centrally to yield the modal properties. In such methods, the need for a centralized processing unit capable of satisfying large memory and processing demands is unavoidable. With the advent of wireless smart sensor networks, it is now possible to process information locally at the sensor level, instead. The information at the individual sensor level can then be concatenated to obtain the global structure characteristics. A novel decentralized algorithm based on wavelet transforms to infer global structure mode information using measurements obtained using a small group of sensors at a time is proposed in this paper. The focus of the paper is on algorithmic development, while the actual hardware and software implementation is not pursued here. The problem of identification is cast within the framework of under-determined blind source separation invoking transformations of measurements to the time-frequency domain resulting in a sparse representation. The partial mode shape coefficients so identified are then combined to yield complete modal information. The transformations are undertaken using stationary wavelet packet transform (SWPT), yielding a sparse representation in the wavelet domain. Principal component analysis (PCA) is then performed on the resulting wavelet coefficients, yielding the partial mixing matrix coefficients from a few measurement channels at a time. This process is repeated using measurements obtained from multiple sensor groups, and the results so obtained from each group are concatenated to obtain the global modal characteristics of the structure.

Observation of a free-Shercliff-layer instability in cylindrical geometry.

PubMed

Roach, Austin H; Spence, Erik J; Gissinger, Christophe; Edlund, Eric M; Sloboda, Peter; Goodman, Jeremy; Ji, Hantao

2012-04-13

We report on observations of a free-Shercliff-layer instability in a Taylor-Couette experiment using a liquid metal over a wide range of Reynolds numbers, Re∼10(3)-10(6). The free Shercliff layer is formed by imposing a sufficiently strong axial magnetic field across a pair of differentially rotating axial end cap rings. This layer is destabilized by a hydrodynamic Kelvin-Helmholtz-type instability, characterized by velocity fluctuations in the r-θ plane. The instability appears with an Elsasser number above unity, and saturates with an azimuthal mode number m which increases with the Elsasser number. Measurements of the structure agree well with 2D global linear mode analyses and 3D global nonlinear simulations. These observations have implications for a range of rotating MHD systems in which similar shear layers may be produced.

Transient analysis mode participation for modal survey target mode selection using MSC/NASTRAN DMAP

NASA Technical Reports Server (NTRS)

Barnett, Alan R.; Ibrahim, Omar M.; Sullivan, Timothy L.; Goodnight, Thomas W.

1994-01-01

Many methods have been developed to aid analysts in identifying component modes which contribute significantly to component responses. These modes, typically targeted for dynamic model correlation via a modal survey, are known as target modes. Most methods used to identify target modes are based on component global dynamic behavior. It is sometimes unclear if these methods identify all modes contributing to responses important to the analyst. These responses are usually those in areas of hardware design concerns. One method used to check the completeness of target mode sets and identify modes contributing significantly to important component responses is mode participation. With this method, the participation of component modes in dynamic responses is quantified. Those modes which have high participation are likely modal survey target modes. Mode participation is most beneficial when it is used with responses from analyses simulating actual flight events. For spacecraft, these responses are generated via a structural dynamic coupled loads analysis. Using MSC/NASTRAN DMAP, a method has been developed for calculating mode participation based on transient coupled loads analysis results. The algorithm has been implemented to be compatible with an existing coupled loads methodology and has been used successfully to develop a set of modal survey target modes.

A Strategy Combining Higher Energy C-Trap Dissociation with Neutral Loss- and Product Ion-Based MSn Acquisition for Global Profiling and Structure Annotation of Fatty Acids Conjugates

NASA Astrophysics Data System (ADS)

Bi, Qi-rui; Hou, Jin-jun; Yang, Min; Shen, Yao; Qi, Peng; Feng, Rui-hong; Dai, Zhuo; Yan, Bing-peng; Wang, Jian-wei; Shi, Xiao-jian; Wu, Wan-ying; Guo, De-an

2017-03-01

Fatty acids conjugates (FACs) are ubiquitous but found in trace amounts in the natural world. They are composed of multiple unknown substructures and side chains. Thus, FACs are difficult to be analyzed by traditional mass spectrometric methods. In this study, an integrated strategy was developed to global profiling and targeted structure annotation of FACs in complex matrix by LTQ Orbitrap. Dicarboxylic acid conjugated bufotoxins (DACBs) in Venenum bufonis (VB) were used as model compounds. The new strategy (abbreviated as HPNA) combined higher-energy C-trap dissociation (HCD) with product ion- (PI), neutral loss- (NL) based MSn (n ≥ 3) acquisition in both positive-ion mode and negative-ion mode. Several advantages are presented. First, various side chains were found under HCD in negative-ion mode, which included both known and unknown side chains. Second, DACBs with multiple side chains were simultaneously detected in one run. Compared with traditional quadrupole-based mass method, it greatly increased analysis throughput. Third, the fragment ions of side chain and steroids substructure could be obtained by PI- and NL-based MSn acquisition, respectively, which greatly increased the accuracy of the structure annotation of DACBs. In all, 78 DACBs have been discovered, of which 68 were new compounds; 25 types of substructure formulas and seven dicarboxylic acid side chains were found, especially five new side chains, including two saturated dicarboxylic acids [(azelaic acid (C9) and sebacic acid (C10)] and three unsaturated dicarboxylic acids (u-C8, u-C9, and u-C10). All these results greatly enriched the structures of DACBs in VB.

Can CFMIP2 models reproduce the leading modes of cloud vertical structure in the CALIPSO-GOCCP observations?

NASA Astrophysics Data System (ADS)

Wang, Fang; Yang, Song

2018-02-01

Using principal component (PC) analysis, three leading modes of cloud vertical structure (CVS) are revealed by the GCM-Oriented CALIPSO Cloud Product (GOCCP), i.e. tropical high, subtropical anticyclonic and extratropical cyclonic cloud modes (THCM, SACM and ECCM, respectively). THCM mainly reflect the contrast between tropical high clouds and clouds in middle/high latitudes. SACM is closely associated with middle-high clouds in tropical convective cores, few-cloud regimes in subtropical anticyclonic clouds and stratocumulus over subtropical eastern oceans. ECCM mainly corresponds to clouds along extratropical cyclonic regions. Models of phase 2 of Cloud Feedback Model Intercomparison Project (CFMIP2) well reproduce the THCM, but SACM and ECCM are generally poorly simulated compared to GOCCP. Standardized PCs corresponding to CVS modes are generally captured, whereas original PCs (OPCs) are consistently underestimated (overestimated) for THCM (SACM and ECCM) by CFMIP2 models. The effects of CVS modes on relative cloud radiative forcing (RSCRF/RLCRF) (RSCRF being calculated at the surface while RLCRF at the top of atmosphere) are studied in terms of principal component regression method. Results show that CFMIP2 models tend to overestimate (underestimated or simulate the opposite sign) RSCRF/RLCRF radiative effects (REs) of ECCM (THCM and SACM) in unit global mean OPC compared to observations. These RE biases may be attributed to two factors, one of which is underestimation (overestimation) of low/middle clouds (high clouds) (also known as stronger (weaker) REs in unit low/middle (high) clouds) in simulated global mean cloud profiles, the other is eigenvector biases in CVS modes (especially for SACM and ECCM). It is suggested that much more attention should be paid on improvement of CVS, especially cloud parameterization associated with particular physical processes (e.g. downwelling regimes with the Hadley circulation, extratropical storm tracks and others), which may be crucial to reduce the CRF biases in current climate models.

Atomistic modeling of the low-frequency mechanical modes and Raman spectra of icosahedral virus capsids

NASA Astrophysics Data System (ADS)

Dykeman, Eric C.; Sankey, Otto F.

2010-02-01

We describe a technique for calculating the low-frequency mechanical modes and frequencies of a large symmetric biological molecule where the eigenvectors of the Hessian matrix are determined with full atomic detail. The method, which follows order N methods used in electronic structure theory, determines the subset of lowest-frequency modes while using group theory to reduce the complexity of the problem. We apply the method to three icosahedral viruses of various T numbers and sizes; the human viruses polio and hepatitis B, and the cowpea chlorotic mottle virus, a plant virus. From the normal-mode eigenvectors, we use a bond polarizability model to predict a low-frequency Raman scattering profile for the viruses. The full atomic detail in the displacement patterns combined with an empirical potential-energy model allows a comparison of the fully atomic normal modes with elastic network models and normal-mode analysis with only dihedral degrees of freedom. We find that coarse-graining normal-mode analysis (particularly the elastic network model) can predict the displacement patterns for the first few (˜10) low-frequency modes that are global and cooperative.

Benchmark studies of the gyro-Landau-fluid code and gyro-kinetic codes on kinetic ballooning modes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, T. F.; Lawrence Livermore National Laboratory, Livermore, California 94550; Xu, X. Q.

2016-03-15

A Gyro-Landau-Fluid (GLF) 3 + 1 model has been recently implemented in BOUT++ framework, which contains full Finite-Larmor-Radius effects, Landau damping, and toroidal resonance [Ma et al., Phys. Plasmas 22, 055903 (2015)]. A linear global beta scan has been conducted using the JET-like circular equilibria (cbm18 series), showing that the unstable modes are kinetic ballooning modes (KBMs). In this work, we use the GYRO code, which is a gyrokinetic continuum code widely used for simulation of the plasma microturbulence, to benchmark with GLF 3 + 1 code on KBMs. To verify our code on the KBM case, we first perform the beta scan basedmore » on “Cyclone base case parameter set.” We find that the growth rate is almost the same for two codes, and the KBM mode is further destabilized as beta increases. For JET-like global circular equilibria, as the modes localize in peak pressure gradient region, a linear local beta scan using the same set of equilibria has been performed at this position for comparison. With the drift kinetic electron module in the GYRO code by including small electron-electron collision to damp electron modes, GYRO generated mode structures and parity suggest that they are kinetic ballooning modes, and the growth rate is comparable to the GLF results. However, a radial scan of the pedestal for a particular set of cbm18 equilibria, using GYRO code, shows different trends for the low-n and high-n modes. The low-n modes show that the linear growth rate peaks at peak pressure gradient position as GLF results. However, for high-n modes, the growth rate of the most unstable mode shifts outward to the bottom of pedestal and the real frequency of what was originally the KBMs in ion diamagnetic drift direction steadily approaches and crosses over to the electron diamagnetic drift direction.« less

Modeling the excitation of global Alfven modes by an external antenna in the Joint European Torus (JET)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Huysmans, G.T.A.; Kerner, W.; Borba, D.

1995-05-01

The active excitation of global Alfven modes using the saddle coils in the Joint European Torus (JET) [{ital Plasma} {ital Physics} {ital and} {ital Controlled} {ital Nuclear} {ital Fusion} {ital Research} 1984, Proceedings of the 10th International Conference, London (International Atomic Energy Agency, Vienna, 1985), Vol. 1, p. 11] as the external antenna, will provide information on the damping of global modes without the need to drive the modes unstable. For the modeling of the Alfven mode excitation, the toroidal resistive magnetohydrodynamics (MHD) code CASTOR (Complex Alfven Spectrum in TORoidal geometry) [18{ital th} {ital EPS} {ital Conference} {ital On} {italmore » Controlled} {ital Fusion} {ital and} {ital Plasma} {ital Physics}, Berlin, 1991, edited by P. Bachmann and D. C. Robinson (The European Physical Society, Petit-Lancy, 1991), Vol. 15, Part IV, p. 89] has been extended to calculate the response to an external antenna. The excitation of a high-performance, high beta JET discharge is studied numerically. In particular, the influence of a finite pressure is investigated. Weakly damped low-{ital n} global modes do exist in the gaps in the continuous spectrum at high beta. A pressure-driven global mode is found due to the interaction of Alfven and slow modes. Its frequency scales solely with the plasma temperature, not like a pure Alfven mode with a density and magnetic field.« less

Hybrid simulation of fishbone instabilities in the EAST tokamak

NASA Astrophysics Data System (ADS)

Shen, Wei; Fu, Guoyong; Wang, Feng; Xu, Liqing; Li, Guoqiang; Liu, Chengyue; EAST Team

2017-10-01

Hybrid simulations with the global kinetic- MHD code M3D-K have been carried out to investigate the linear stability and nonlinear dynamics of beam-driven fishbone in EAST experiment. Linear simulations show that a low frequency fishbone instability is excited at experimental value of beam ion pressure. The mode is mainly driven by low energy beam ions via precessional resonance. The results are consistent with the experimental measurement with respect to mode frequency and mode structure. When the beam ion pressure is increased to exceed a critical value, the low frequency mode transits to a BAE with much higher frequency. Nonlinear simulations show that the frequency of the low frequency fishbone chirps up and down with corresponding hole-clump structures in phase space, consistent with the Berk-Breizman theory. In addition to the low frequency mode, the high frequency BAE is excited during the nonlinear evolution. For the transient case of beam pressure fraction where the low and high frequency modes are simultaneously excited in the linear phase, only one dominant mode appears in the nonlinear phase with frequency jumps up and down during nonlinear evolution. This work is supported by the National Natural Science Foundation of China under Grant Nos. 11605245 and 11505022, and the CASHIPS Director's Fund under Grant No. YZJJ201510, and the Department of Energy Scientific Discovery through Advanced Computing (SciDAC) under Grant No. DE-AC02-09CH11466.

Simultaneous Multi-Scale Diffusion Estimation and Tractography Guided by Entropy Spectrum Pathways

PubMed Central

Galinsky, Vitaly L.; Frank, Lawrence R.

2015-01-01

We have developed a method for the simultaneous estimation of local diffusion and the global fiber tracts based upon the information entropy flow that computes the maximum entropy trajectories between locations and depends upon the global structure of the multi-dimensional and multi-modal diffusion field. Computation of the entropy spectrum pathways requires only solving a simple eigenvector problem for the probability distribution for which efficient numerical routines exist, and a straight forward integration of the probability conservation through ray tracing of the convective modes guided by a global structure of the entropy spectrum coupled with a small scale local diffusion. The intervoxel diffusion is sampled by multi b-shell multi q-angle DWI data expanded in spherical waves. This novel approach to fiber tracking incorporates global information about multiple fiber crossings in every individual voxel and ranks it in the most scientifically rigorous way. This method has potential significance for a wide range of applications, including studies of brain connectivity. PMID:25532167

Nonlinear dynamics and damage induced properties of soft matter with application in oncology

NASA Astrophysics Data System (ADS)

Naimark, O.

2017-09-01

Molecular-morphological signs of oncogenesis could be linked to multiscale collective effects in molecular, cell and tissue related to defects (damage) dynamics. It was shown that nonlinear behavior of biological systems can be linked to the existence of characteristic collective open state modes providing the coherent expression dynamics. New type of criticality in nonequilibrium systems with defects—structural-scaling transition allows the definition of the `driving force' for a biological soft matter related to consolidated open states. The set of collective open states (breathers, autosolitons and blow-up modes) in the molecular ensembles provides the collective expression dynamics to attract the entire system (cell, tissue) toward a few preferred global states. The co-existence of three types of collective modes determines the multifractal scenario of biological soft matter dynamics. The appearance of `globally convergent' dynamics corresponding to the coherent behavior of multiscale blow-up open states (blow-up gene expression) leads to anomalous localized softening (blow-up localized damage) and the subjection of the cells (or tissue) to monofractal dynamics. This dynamics can be associated with cancer progression.

Computation of the bluff-body sound generation by a self-consistent mean flow formulation

NASA Astrophysics Data System (ADS)

Fani, A.; Citro, V.; Giannetti, F.; Auteri, F.

2018-03-01

The sound generated by the flow around a circular cylinder is numerically investigated by using a finite-element method. In particular, we study the acoustic emissions generated by the flow past the bluff body at low Mach and Reynolds numbers. We perform a global stability analysis by using the compressible linearized Navier-Stokes equations. The resulting direct global mode provides detailed information related to the underlying hydrodynamic instability and data on the acoustic field generated. In order to recover the intensity of the produced sound, we apply the self-consistent model for non-linear saturation proposed by Mantič-Lugo, Arratia, and Gallaire ["Self-consistent mean flow description of the nonlinear saturation of the vortex shedding in the cylinder wake," Phys. Rev. Lett. 113, 084501 (2014)]. The application of this model allows us to compute the amplitude of the resulting linear mode and the effects of saturation on the mode structure and acoustic field. Our results show excellent agreement with those obtained by a full compressible simulation direct numerical simulation and those derived by the application of classical acoustic analogy formulations.

Service tough composite structures using the Z-direction reinforcement process

NASA Technical Reports Server (NTRS)

Freitas, Glenn; Magee, Constance; Boyce, Joseph; Bott, Richard

1992-01-01

Foster-Miller has developed a new process to provide through thickness reinforcement of composite structures. The process reinforces laminates locally or globally on-tool during standard autoclave processing cycles. Initial test results indicate that the method has the potential to significantly reduce delamination in carbon-epoxy. Laminates reinforced with the z-fiber process have demonstrated significant improvements in mode 1 fracture toughness and compression strength after impact. Unlike alternative methods, in-plane properties are not adversely affected.

Global Alfvén eigenmodes in the H-1 heliac

NASA Astrophysics Data System (ADS)

Hole, M. J.; Blackwell, B. D.; Bowden, G.; Cole, M.; Könies, A.; Michael, C.; Zhao, F.; Haskey, S. R.

2017-12-01

Recent upgrades in H-1 power supplies have enabled the operation of the H-1 experiment at higher heating powers than previously attainable. A heating power scan in mixed hydrogen/helium plasmas reveals a change in mode activity with increasing heating power. At low power (< 50 kW) modes with beta-induced Alfvén eigenmode frequency scaling are observed. At higher power modes consistent with an analysis of nonconventional global Alfvén eigenmodes (GAEs) are observed, the subject of this work. We have computed the mode continuum, and identified GAE structures using the ideal MHD solver CKA and the gyrokinetic code EUTERPE. An analytic model for ICRH-heated minority ions is used to estimate the fast ion temperature from the hydrogen species. Linear growth rate scans using a local flux surface stability calculation, LGRO, are performed. These studies demonstrate drive from the radial spatial gradient of circulating particles whose speed is significantly less than the Alfvén speed, and are resonant with the mode through harmonics of the Fourier decomposition of the strongly shaped heliac magnetic field. They reveal drive is possible with a small ({n}f/{n}0< 0.2) hot energetic tail of the hydrogen species, for which {T}f> 300 {eV}. Local linear growth rate scans are also complemented with global calculations from CKA and EUTERPE. These qualitatively confirm the findings from the LGRO study, and show that the inclusion of finite Larmor radius effects can reduce the growth rate by a factor of up to ten, and increases the marginal stability fast ion temperature by a factor of two. Finally, a study of damping of the global mode with the thermal plasma is conducted, computing continuum damping , and the damping arising from finite Larmor radius and parallel electric fields (via resistivity). We find that continuum damping is of order 0.1% for the configuration studied. A similar calculation in the cylindrical plasma model produces a frequency 35% higher and a damping 30% of the three-dimensional result: this confirms the importance of strong magnetic shaping to the frequency and damping. The inclusion of resistivity lifts the damping to γ /ω =-0.189. Such large damping is consistent with experimental observations that in absence of drive the mode decays rapidly (∼0.1 ms).

5-Methylation of Cytosine in CG:CG Base-Pair Steps: A Physicochemical Mechanism for the Epigenetic Control of DNA Nanomechanics

NASA Astrophysics Data System (ADS)

Yusufaly, Tahir; Olson, Wilma; Li, Yun

2014-03-01

Van der Waals density functional theory is integrated with analysis of a non-redundant set of protein-DNA crystal structures from the Nucleic Acid Database to study the stacking energetics of CG:CG base-pair steps, specifically the role of cytosine 5-methylation. Principal component analysis of the steps reveals the dominant collective motions to correspond to a tensile ``opening'' mode and two shear ``sliding'' and ``tearing'' modes in the orthogonal plane. The stacking interactions of the methyl groups are observed to globally inhibit CG:CG step overtwisting while simultaneously softening the modes locally via potential energy modulations that create metastable states. The results have implications for the epigenetic control of DNA mechanics.

Magnetic seismology of interstellar gas clouds: Unveiling a hidden dimension

NASA Astrophysics Data System (ADS)

Tritsis, Aris; Tassis, Konstantinos

2018-05-01

Stars and planets are formed inside dense interstellar molecular clouds by processes imprinted on the three-dimensional (3D) morphology of the clouds. Determining the 3D structure of interstellar clouds remains challenging because of projection effects and difficulties measuring the extent of the clouds along the line of sight. We report the detection of normal vibrational modes in the isolated interstellar cloud Musca, allowing determination of the 3D physical dimensions of the cloud. We found that Musca is vibrating globally, with the characteristic modes of a sheet viewed edge on, not the characteristics of a filament as previously supposed. We reconstructed the physical properties of Musca through 3D magnetohydrodynamic simulations, reproducing the observed normal modes and confirming a sheetlike morphology.

Networked dynamical systems with linear coupling: synchronisation patterns, coherence and other behaviours.

PubMed

Judd, Kevin

2013-12-01

Many physical and biochemical systems are well modelled as a network of identical non-linear dynamical elements with linear coupling between them. An important question is how network structure affects chaotic dynamics, for example, by patterns of synchronisation and coherence. It is shown that small networks can be characterised precisely into patterns of exact synchronisation and large networks characterised by partial synchronisation at the local and global scale. Exact synchronisation modes are explained using tools of symmetry groups and invariance, and partial synchronisation is explained by finite-time shadowing of exact synchronisation modes.

Fast-sausage oscillations in coronal loops with smooth boundary

NASA Astrophysics Data System (ADS)

Lopin, I.; Nagorny, I.

2014-12-01

Aims: The effect of the transition layer (shell) in nonuniform coronal loops with a continuous radial density profile on the properties of fast-sausage modes are studied analytically and numerically. Methods: We modeled the coronal waveguide as a structured tube consisting of a cord and a transition region (shell) embedded within a magnetic uniform environment. The derived general dispersion relation was investigated analytically and numerically in the context of frequency, cut-off wave number, and the damping rate of fast-sausage oscillations for various values of loop parameters. Results: The frequency of the global fast-sausage mode in the loops with a diffuse (or smooth) boundary is determined mainly by the external Alfvén speed and longitudinal wave number. The damping rate of such a mode can be relatively low. The model of coronal loop with diffuse boundary can support a comparatively low-frequency, global fast-sausage mode of detectable quality without involving extremely low values of the density contrast. The effect of thin transition layer (corresponds to the loops with steep boundary) is negligible and produces small reductions of oscillation frequency and relative damping rate in comparison with the case of step-function density profile. Seismological application of obtained results gives the estimated Alfvén speed outside the flaring loop about 3.25 Mm/s.

Emergence of a few distinct structures from a single formal structure type during high-throughput screening for stable compounds: The case of RbCuS and RbCuSe

NASA Astrophysics Data System (ADS)

Trimarchi, Giancarlo; Zhang, Xiuwen; DeVries Vermeer, Michael J.; Cantwell, Jacqueline; Poeppelmeier, Kenneth R.; Zunger, Alex

2015-10-01

Theoretical sorting of stable and synthesizable "missing compounds" from those that are unstable is a crucial step in the discovery of previously unknown functional materials. This active research area often involves high-throughput (HT) examination of the total energy of a given compound in a list of candidate formal structure types (FSTs), searching for those with the lowest energy within that list. While it is well appreciated that local relaxation methods based on a fixed list of structure types can lead to inaccurate geometries, this approach is widely used in HT studies because it produces answers faster than global optimization methods (that vary lattice vectors and atomic positions without local restrictions). We find, however, a different failure mode of the HT protocol: specific crystallographic classes of formal structure types each correspond to a series of chemically distinct "daughter structure types" (DSTs) that have the same space group but possess totally different local bonding configurations, including coordination types. Failure to include such DSTs in the fixed list of examined candidate structures used in contemporary high-throughput approaches can lead to qualitative misidentification of the stable bonding pattern, not just quantitative inaccuracies. In this work, we (i) clarify the understanding of the general DST-FST relationship, thus improving current discovery HT approaches, (ii) illustrate this failure mode for RbCuS and RbCuSe (the latter being a yet unreported compound and is predicted here) by developing a synthesis method and accelerated crystal-structure determination, and (iii) apply the genetic-algorithm-based global space-group optimization (GSGO) approach which is not vulnerable to the failure mode of HT searches of fixed lists, demonstrating a correct identification of the stable DST. The broad impact of items (i)-(iii) lies in the demonstrated predictive ability of a more comprehensive search strategy than what is currently used—use HT calculations as the preliminary broad screening followed by unbiased GSGO of the final candidates.

Advection modes by optimal mass transfer

NASA Astrophysics Data System (ADS)

Iollo, Angelo; Lombardi, Damiano

2014-02-01

Classical model reduction techniques approximate the solution of a physical model by a limited number of global modes. These modes are usually determined by variants of principal component analysis. Global modes can lead to reduced models that perform well in terms of stability and accuracy. However, when the physics of the model is mainly characterized by advection, the nonlocal representation of the solution by global modes essentially reduces to a Fourier expansion. In this paper we describe a method to determine a low-order representation of advection. This method is based on the solution of Monge-Kantorovich mass transfer problems. Examples of application to point vortex scattering, Korteweg-de Vries equation, and hurricane Dean advection are discussed.

Investigation of Structural Dynamics in a 2-Meter Square Solar Sail Model Including Axial Load Effects

NASA Technical Reports Server (NTRS)

Holland, D. B.; Virgin, L. N.; Belvin, W. K.

2003-01-01

This paper presents a parameter study of the effect of boom axial loading on the global dynamics of a 2-meter solar sail scale model. The experimental model used is meant for building expertise in finite element analysis and experimental execution, not as a predecessor to any planned flight mission or particular design concept. The results here are to demonstrate the ability to predict and measure structural dynamics and mode shapes in the presence of axial loading.

Determination of low-frequency normal modes and structure coefficients using optimal sequence stacking method and autoregressive method in frequency domain

NASA Astrophysics Data System (ADS)

Majstorovic, J.; Rosat, S.; Lambotte, S.; Rogister, Y. J. G.

2017-12-01

Although there are numerous studies about 3D density Earth model, building an accurate one is still an engaging challenge. One procedure to refine global 3D Earth density models is based on unambiguous measurements of Earth's normal mode eigenfrequencies. To have unbiased eigenfrequency measurements one needs to deal with a variety of time records quality and especially different noise sources, while standard approaches usually include signal processing methods such as Fourier transform. Here we present estimate of complex eigenfrequencies and structure coefficients for several modes below 1 mHz (0S2, 2S1, etc.). Our analysis is performed in three steps. The first step includes the use of stacking methods to enhance specific modes of interest above the observed noise level. Out of three trials the optimal sequence estimation turned out to be the foremost compared to the spherical harmonic stacking method and receiver strip method. In the second step we apply an autoregressive method in the frequency domain to estimate complex eigenfrequencies of target modes. In the third step we apply the phasor walkout method to test and confirm our eigenfrequencies. Before conducting an analysis of time records, we evaluate how the station distribution and noise levels impact the estimate of eigenfrequencies and structure coefficients by using synthetic seismograms calculated for a 3D realistic Earth model, which includes Earth's ellipticity and lateral heterogeneity. Synthetic seismograms are computed by means of normal mode summation using self-coupling and cross-coupling of modes up to 1 mHz. Eventually, the methods tested on synthetic data are applied to long-period seismometer and superconducting gravimeter data recorded after six mega-earthquakes of magnitude greater than 8.3. Hence, we propose new estimates of structure coefficients dependent on the density variations.

Correlating regional natural hazards for global reinsurance risk assessment

NASA Astrophysics Data System (ADS)

Steptoe, Hamish; Maynard, Trevor; Economou, Theo; Fox, Helen; Wallace, Emily; Maisey, Paul

2016-04-01

Concurrent natural hazards represent an uncertainty in assessing exposure for the insurance industry. The recently implemented Solvency II Directive requires EU insurance companies to fully understand and justify their capital reserving and portfolio decisions. Lloyd's, the London insurance and reinsurance market, commissioned the Met Office to investigate the dependencies between different global extreme weather events (known to the industry as perils), and the mechanisms for these dependencies, with the aim of helping them assess their compound risk to the exposure of multiple simultaneous hazards. In this work, we base the analysis of hazard-to-hazard dependency on the interaction of different modes of global and regional climate variability. Lloyd's defined 16 key hazard regions, including Australian wildfires, flooding in China and EU windstorms, and we investigate the impact of 10 key climate modes on these areas. We develop a statistical model that facilitates rapid risk assessment whilst allowing for both temporal auto-correlation and, crucially, interdependencies between drivers. The simulator itself is built conditionally using autoregressive regression models for each driver conditional on the others. Whilst the baseline assumption within the (re)insurance industry is that different natural hazards are independent of each other, the assumption of independence of meteorological risks requires greater justification. Although our results suggest that most of the 120 hazard-hazard connections considered are likely to be independent of each other, 13 have significant dependence arising from one or more global modes of climate variability. This allows us to create a matrix of linkages describing the hazard dependency structure that Lloyd's can use to inform their understanding of risk.

Global MHD modeling of resonant ULF waves: Simulations with and without a plasmasphere.

PubMed

Claudepierre, S G; Toffoletto, F R; Wiltberger, M

2016-01-01

We investigate the plasmaspheric influence on the resonant mode coupling of magnetospheric ultralow frequency (ULF) waves using the Lyon-Fedder-Mobarry (LFM) global magnetohydrodynamic (MHD) model. We present results from two different versions of the model, both driven by the same solar wind conditions: one version that contains a plasmasphere (the LFM coupled to the Rice Convection Model, where the Gallagher plasmasphere model is also included) and another that does not (the stand-alone LFM). We find that the inclusion of a cold, dense plasmasphere has a significant impact on the nature of the simulated ULF waves. For example, the inclusion of a plasmasphere leads to a deeper (more earthward) penetration of the compressional (azimuthal) electric field fluctuations, due to a shift in the location of the wave turning points. Consequently, the locations where the compressional electric field oscillations resonantly couple their energy into local toroidal mode field line resonances also shift earthward. We also find, in both simulations, that higher-frequency compressional (azimuthal) electric field oscillations penetrate deeper than lower frequency oscillations. In addition, the compressional wave mode structure in the simulations is consistent with a radial standing wave oscillation pattern, characteristic of a resonant waveguide. The incorporation of a plasmasphere into the LFM global MHD model represents an advance in the state of the art in regard to ULF wave modeling with such simulations. We offer a brief discussion of the implications for radiation belt modeling techniques that use the electric and magnetic field outputs from global MHD simulations to drive particle dynamics.

Playing in or out of character: user role differences in the experience of interactive storytelling.

PubMed

Roth, Christian; Vermeulen, Ivar; Vorderer, Peter; Klimmt, Christoph; Pizzi, David; Lugrin, Jean-Luc; Cavazza, Marc

2012-11-01

Interactive storytelling (IS) is a promising new entertainment technology synthesizing preauthored narrative with dynamic user interaction. Existing IS prototypes employ different modes to involve users in a story, ranging from individual avatar control to comprehensive control over the virtual environment. The current experiment tested whether different player modes (exerting local vs. global influence) yield different user experiences (e.g., senses of immersion vs. control). A within-subject design involved 34 participants playing the cinematic IS drama "Emo Emma"( 1 ) both in the local (actor) and in global (ghost) mode. The latter mode allowed free movement in the virtual environment and hidden influence on characters, objects, and story development. As expected, control-related experiential qualities (effectance, autonomy, flow, and pride) were more intense for players in the global (ghost) mode. Immersion-related experiences did not differ over modes. Additionally, men preferred the sense of command facilitated by the ghost mode, whereas women preferred the sense of involvement facilitated by the actor mode.

Solving large-scale dynamic systems using band Lanczos method in Rockwell NASTRAN on CRAY X-MP

NASA Technical Reports Server (NTRS)

Gupta, V. K.; Zillmer, S. D.; Allison, R. E.

1986-01-01

The improved cost effectiveness using better models, more accurate and faster algorithms and large scale computing offers more representative dynamic analyses. The band Lanczos eigen-solution method was implemented in Rockwell's version of 1984 COSMIC-released NASTRAN finite element structural analysis computer program to effectively solve for structural vibration modes including those of large complex systems exceeding 10,000 degrees of freedom. The Lanczos vectors were re-orthogonalized locally using the Lanczos Method and globally using the modified Gram-Schmidt method for sweeping rigid-body modes and previously generated modes and Lanczos vectors. The truncated band matrix was solved for vibration frequencies and mode shapes using Givens rotations. Numerical examples are included to demonstrate the cost effectiveness and accuracy of the method as implemented in ROCKWELL NASTRAN. The CRAY version is based on RPK's COSMIC/NASTRAN. The band Lanczos method was more reliable and accurate and converged faster than the single vector Lanczos Method. The band Lanczos method was comparable to the subspace iteration method which was a block version of the inverse power method. However, the subspace matrix tended to be fully populated in the case of subspace iteration and not as sparse as a band matrix.

Modeling resistive wall modes and disruptive instabilities with M3D-C1

NASA Astrophysics Data System (ADS)

Ferraro, Nm; Jardin, Sc; Pfefferle, D.

2016-10-01

Disruptive instabilities pose a significant challenge to the tokamak approach to magnetic fusion energy, and must be reliably avoided in a successful reactor. These instabilities generally involve rapid, global changes to the magnetic field, and electromagnetic interaction with surrounding conducting structures. Here we apply the extended-MHD code M3D-C1 to calculate the stability and evolution of disruptive modes, including their interaction with external conducting structures. The M3D-C1 model includes the effects of resistivity, equilibrium rotation, and resistive walls of arbitrary thickness, each of which may play important roles in the stability and evolution of disruptive modes. The strong stabilizing effect of rotation on resistive wall modes is explored and compared with analytic theory. The nonlinear evolution of vertical displacement events is also considered, including the evolution of non-axisymmetric instabilities that may arise during the current-quench phase of the disruption. It is found that the non-axisymmetric stability of the plasma during a VDE depends strongly on the thermal history of the plasma. This work is supported by US DOE Grant DE-AC02-09CH11466 and the SciDAC Center for Extended MHD Modeling.

Theoretical and experimental study on active sound transmission control based on single structural mode actuation using point force actuators.

PubMed

Sanada, Akira; Tanaka, Nobuo

2012-08-01

This study deals with the feedforward active control of sound transmission through a simply supported rectangular panel using vibration actuators. The control effect largely depends on the excitation method, including the number and locations of actuators. In order to obtain a large control effect at low frequencies over a wide frequency, an active transmission control method based on single structural mode actuation is proposed. Then, with the goal of examining the feasibility of the proposed method, the (1, 3) mode is selected as the target mode and a modal actuation method in combination with six point force actuators is considered. Assuming that a single input single output feedforward control is used, sound transmission in the case minimizing the transmitted sound power is calculated for some actuation methods. Simulation results showed that the (1, 3) modal actuation is globally effective at reducing the sound transmission by more than 10 dB in the low-frequency range for both normal and oblique incidences. Finally, experimental results also showed that a large reduction could be achieved in the low-frequency range, which proves the validity and feasibility of the proposed method.

Magnetosheath Filamentary Structures

NASA Astrophysics Data System (ADS)

Rojas-Castillo, D. I.; Blanco-Cano, X.; Omidi, N.; Kajdic, P.

2014-12-01

The terrestrial magnetosheath is full of highly perturbed plasma. The inhomogeneity of this region leads to temperature anisotropies that can originate waves; e.g, mirror mode and ion cyclotron waves. Other structures like the magnetosheath filamentary structures (MFS) can also be present. These are structures reported from results of global hybrid simulations by Omidi et al. (2014) that are formed in the quasi-parallel region of the bow shock and they are convected into the magnetosheath. The MFS are characterized by field aligned enhancements of density and temperature that are anti-correlated. In this work we analyze magnetic field and plasma data from the THEMIS mission to explore the possible existence of MFS.

Effect of surface tension on global modes of confined wake flows

NASA Astrophysics Data System (ADS)

Tammisola, Outi; Lundell, Fredrik; Söderberg, L. Daniel

2011-01-01

Many wake flows are susceptible to self-sustained oscillations, such as the well-known von Kármán vortex street behind a cylinder that makes a rope beat against a flagpole at a distinct frequency on a windy day. One appropriate method to study these global instabilities numerically is to look at the growth rates of the linear temporal global modes. If all growth rates for all modes are negative for a certain flow field then a self-sustained oscillation should not occur. On the other hand, if one growth rate for one mode is slightly positive, the oscillation will approximately obtain the frequency and shape of this global mode. In our study, we first introduce surface tension between two fluids to the wake-flow problem. Then we investigate its effects on the global linear instability of a spatially developing wake with two co-flowing immiscible fluids. The inlet profile consists of two uniform layers, which makes the problem easily parametrizable. The fluids are assumed to have the same density and viscosity, with the result that the interface position becomes dynamically important solely through the action of surface tension. Two wakes with different parameter values and surface tension are studied in detail. The results show that surface tension has a strong influence on the oscillation frequency, growth rate, and shape of the global mode(s). Finally, we make an attempt to confirm and explain the surface-tension effect based on a local stability analysis of the same flow field in the streamwise position of maximum reverse flow.

On extended analytic theory of 2D ballooning modes in tokamak plasmas

NASA Astrophysics Data System (ADS)

Abdoul, Peshwaz; Dickinson, David; Roach, Colin; Wilson, Howard

2016-10-01

We have extended the leading order ballooning theory which typically yields more unstable isolated mode (IM) that usually sit on the outboard mid-plane, to higher order where less unstable general mode (GM) sits at a different poloidal location. Our analytic theory has revealed that any poloidal shift of the mode with respect to the outboard mid-plane - arising from the effect of profile variations, for example - is always accompanied by an asymmetry of the radial eigenmode structure. Hence, GMs have radial asymmetry. Our theory can have important consequences, especially for calculations that invoke quasilinear theory to model intrinsic rotation arising from Reynolds stress. This is very important in ITER for which external torques are small. In such theories it is the radial asymmetry in the global GM mode which can generate a Reynolds stress that could in principle contribute to the poloidal flow during the low to high (L-H) mode transition in tokamaks. I am also an associate member at the York Plasma Institute, University of York and teaching at the Physics Department, University of Sulaimani, Kurdistan Region, Iraq.

Influence of mode-beating pulse on laser-induced plasma

NASA Astrophysics Data System (ADS)

Nishihara, M.; Freund, J. B.; Glumac, N. G.; Elliott, G. S.

2018-04-01

This paper addresses the influence of mode-beating pulse on laser-induced plasma. The second harmonic of a Nd:YAG laser, operated either with the single mode or multimode, was used for non-resonant optical breakdown, and subsequent plasma development was visualized using a streak imaging system. The single mode lasing leads to a stable breakdown location and smooth envelopment of the plasma boundary, while the multimode lasing, with the dominant mode-beating frequency of 500-800 MHz, leads to fluctuations in the breakdown location, a globally modulated plasma surface, and growth of local microstructures at the plasma boundary. The distribution of the local inhomogeneity was measured from the elastic scattering signals on the streak image. The distance between the local structures agreed with the expected wavelength of hydrodynamic instability development due to the interference between the surface excited wave and transmitted wave. A numerical simulation, however, indicates that the local microstructure could also be directly generated at the peaks of the higher harmonic components if the multimode pulse contains up to the eighth harmonic of the fundamental cavity mode.

Global Sliding Mode Control for the Bank-to-Turn of Hypersonic Glide Vehicle

NASA Astrophysics Data System (ADS)

Zhang, J.; Yu, Y. F.; Yan, P. P.; Fan, Y. H.; Guo, X. W.

2017-03-01

The technology of Bank-to-Turn has been recognized as an attractive direction due to their significance for the control of hypersonic glide vehicle. Strong coupling existing among pitch, yaw and roll channel was a great challenge for banking to turn, and thus a novel global sliding mode controller was designed for hypersonic glider in this paper. Considering the coupling among channels as interference, we can use invariance principle of sliding mode motion to realize the decoupling control. The global sliding mode control system could eliminate the stage of reaching, which can lead to the realization of whole systematic process decoupling control. When the global sliding mode factor was designed, a minimum norm pole assignment method of the sliding mode matrix was introduced to improve the robustness of the system. The method of continuity of symbolic function was adopted to overcome the chatter, which furtherly modify the transient performance of the system. The simulation results show that this method has good performance of three channel decoupling control and guidance command tracking. And it can meet the requirements of the dynamic performance of the system.

Conformational analysis, spectroscopic, structure-activity relations and quantum chemical simulation studies of 4-(trifluoromethyl)benzylamine

NASA Astrophysics Data System (ADS)

Arjunan, V.; Devi, L.; Mohan, S.

2018-05-01

The FT-IR and FT-Raman spectra of 4-trifluoromethylbenzylamine (TFMBA) have been recorded in the range 4000-450 and 4000-100 cm-1 respectively. The conformational analysis of the compound has been carried out to attain stable geometry of the compound. The complete vibrational assignment and analysis of the fundamental modes of the compound are carried out using the experimental FTIR and FT-Raman data and quantum chemical studies. The experimental vibrational frequencies are compared with the wavenumbers obtained theoretically from the B3LYP gradient calculations employing the standard high level 6-311++G** and cc-pVTZ basis sets for the optimised geometry of the compound. The structural parameters, thermodynamic properties and vibrational frequencies of the normal modes obtained from the B3LYP methods are in good agreement with the experimental data. The 1H (400 MHz; CDCl3) and 13C (100 MHz; CDCl3) nuclear magnetic resonance (NMR) spectra were also recorded. The electronic properties, highest occupied molecular orbital and lowest unoccupied molecular orbital energies are measured by DFT approach. The charges of the atoms by natural bond orbital (NBO) analysis are determined by B3LYP/cc-pVTZ method. The structure-chemical reactivity relations of the compound are determined through chemical potential, global hardness, global softness, electronegativity, electrophilicity and local reactivity descriptors by conceptual DFT methods.

Global kinetic simulations of neoclassical toroidal viscosity in low-collisional perturbed tokamak plasmas

NASA Astrophysics Data System (ADS)

Matsuoka, Seikichi; Idomura, Yasuhiro; Satake, Shinsuke

2017-10-01

The neoclassical toroidal viscosity (NTV) caused by a non-axisymmetric magnetic field perturbation is numerically studied using two global kinetic simulations with different numerical approaches. Both simulations reproduce similar collisionality ( νb*) dependencies over wide νb * ranges. It is demonstrated that resonant structures in the velocity space predicted by the conventional superbanana-plateau theory exist in the small banana width limit, while the resonances diminish when the banana width becomes large. It is also found that fine scale structures are generated in the velocity space as νb* decreases in the large banana width simulations, leading to the νb* -dependency of the NTV. From the analyses of the particle orbit, it is found that the finite k∥ mode structure along the bounce motion appears owing to the finite orbit width, and it suffers from bounce phase mixing, suggesting the generation of the fine scale structures by the similar mechanism as the parallel phase mixing of passing particles.

Extracting Leading Nonlinear Modes of Changing Climate From Global SST Time Series

NASA Astrophysics Data System (ADS)

Mukhin, D.; Gavrilov, A.; Loskutov, E. M.; Feigin, A. M.; Kurths, J.

2017-12-01

Data-driven modeling of climate requires adequate principal variables extracted from observed high-dimensional data. For constructing such variables it is needed to find spatial-temporal patterns explaining a substantial part of the variability and comprising all dynamically related time series from the data. The difficulties of this task rise from the nonlinearity and non-stationarity of the climate dynamical system. The nonlinearity leads to insufficiency of linear methods of data decomposition for separating different processes entangled in the observed time series. On the other hand, various forcings, both anthropogenic and natural, make the dynamics non-stationary, and we should be able to describe the response of the system to such forcings in order to separate the modes explaining the internal variability. The method we present is aimed to overcome both these problems. The method is based on the Nonlinear Dynamical Mode (NDM) decomposition [1,2], but takes into account external forcing signals. An each mode depends on hidden, unknown a priori, time series which, together with external forcing time series, are mapped onto data space. Finding both the hidden signals and the mapping allows us to study the evolution of the modes' structure in changing external conditions and to compare the roles of the internal variability and forcing in the observed behavior. The method is used for extracting of the principal modes of SST variability on inter-annual and multidecadal time scales accounting the external forcings such as CO2, variations of the solar activity and volcanic activity. The structure of the revealed teleconnection patterns as well as their forecast under different CO2 emission scenarios are discussed.[1] Mukhin, D., Gavrilov, A., Feigin, A., Loskutov, E., & Kurths, J. (2015). Principal nonlinear dynamical modes of climate variability. Scientific Reports, 5, 15510. [2] Gavrilov, A., Mukhin, D., Loskutov, E., Volodin, E., Feigin, A., & Kurths, J. (2016). Method for reconstructing nonlinear modes with adaptive structure from multidimensional data. Chaos: An Interdisciplinary Journal of Nonlinear Science, 26(12), 123101.

Marshall N. Rosenbluth Outstanding Doctoral Thesis Award Talk: Control of Non-Axisymmetric Fields With Static and Dynamic Boundary Conditions

NASA Astrophysics Data System (ADS)

Paz-Soldan, C.

2013-10-01

Small deformations of the otherwise axisymmetric field, known as ``error fields'' (EFs), lead to large changes in global MHD stability. This talk will compare results from both 1) a line-tied screw-pinch with rotating conducting walls and 2) the DIII-D tokamak to illustrate that in both devices the EF has greatest effect where it overlaps with the spatial structure of its global kink mode. In both configurations the kink structure in the symmetry direction is well described by a single mode number (azimuthal m = 1 , toroidal n = 1 , respectively) and EF ordering is clear. In the asymmetric direction (axial and poloidal, respectively) the harmonics of the kink are coupled (by line-tying and toroidicity, respectively) and thus EF ordering is not straightforward. In the pinch, the kink is axially localized to the anode region and consequently the anode EF dominates the MHD stability. In DIII-D, the poloidal harmonics of the n = 1 EF whose pitch is smaller than the local field-line pitch are empirically shown to be dominant across a wide breadth of EF optimization experiments. In analogy with the pinch, these harmonics are also where overlap with the kink is greatest and thus where the largest plasma kink response is found. The robustness of the kink structure further enables vacuum-field cost-function minimization techniques to accurately predict optimal EF correction coil currents by strongly weighting the kink-like poloidal harmonics in the minimization. To test the limits of this paradigm recent experiments in DIII-D imposed field structures that lack kink-overlapping harmonics, yielding ~10X less sensitivity. The very different plasmas of the pinch and tokamak thus both demonstrate the dominance of the kink mode in determining optimal EF correction. Supported by US DOE under DE-AC05-06OR23100, DE-FG02-00ER54603, DE-FC02-04ER54698, and NSF 0903900.

El Nino as an element of a global-scale wave in the atmosphere-ocean system

NASA Astrophysics Data System (ADS)

Serykh, Ilya; Sonechkin, Dmitry

2016-04-01

The analyses of the real meteorological and oceanographical data, and long runs of the coupled atmosphere-ocean hydro- thermodynamical models identify a spatial-temporal structure of the main mode of the interannual to decadal climatic variations. This mode looks like a global-scale wave that extends from West to East around the Earth, and varies rhythmically. In fact, the establishment of this wave is a generalization and development of the well-known structures of the so-called "teleconnections" in the ocean-atmosphere system. The known regional structures like ENSO, IOD, PDO, IPO, PNA, NAO, AO, ACW and other can be considered as parts of this global-scale wave. Moving eastward around the Earth, this wave triggers El Nino - Southern oscillation events. An index of this wave is proposed as a sum of normalized anomalies of the sea level pressure and the near-surface temperature in 20 locations around the globe. It is proven that the power spectrum of this index is not continuous but discrete in its character. Thus, one can suppose that the dynamics of the global-scale wave is nonchaotic, and so predictable with no limit in principle. The index power spectrum reveals statistically significant peaks at the same periods that are inherent to the power spectra of the traditional ENSO indices. The main peaks are at the sub-harmonics of the well-known Chandler wobble (of the ~1.2 year period) in the Earth's pole motion: 3.6; 4.8; 2.4 years. Some other statistically significant peaks also are seen at the super-harmonics of the Luni-Solar nutation (of the ~18.6 year period), and combinational harmonics of the Schwabe's and Hale's solar activity cycles. Based on the eastward propagation of the global-scale wave, a predictor of ENSO events was suggested. It has high correlation (about 0.7) with Nino indices but leads them on about 12 months. The use of this predictor opens a possibility to overcome the Spring Predictability Barrier in ENSO forecasting.

A plasma source driven predator-prey like mechanism as a potential cause of spiraling intermittencies in linear plasma devices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reiser, D.; Ohno, N.; Tanaka, H.

2014-03-15

Three-dimensional global drift fluid simulations are carried out to analyze coherent plasma structures appearing in the NAGDIS-II linear device (nagoya divertor plasma Simulator-II). The numerical simulations reproduce several features of the intermittent spiraling structures observed, for instance, statistical properties, rotation frequency, and the frequency of plasma expulsion. The detailed inspection of the three-dimensional plasma dynamics allows to identify the key mechanism behind the formation of these intermittent events. The resistive coupling between electron pressure and parallel electric field in the plasma source region gives rise to a quasilinear predator-prey like dynamics where the axisymmetric mode represents the prey and themore » spiraling structure with low azimuthal mode number represents the predator. This interpretation is confirmed by a reduced one-dimensional quasilinear model derived on the basis of the findings in the full three-dimensional simulations. The dominant dynamics reveals certain similarities to the classical Lotka-Volterra cycle.« less

Macroscopic damping model for structural dynamics with random polycrystalline configurations

NASA Astrophysics Data System (ADS)

Yang, Yantao; Cui, Junzhi; Yu, Yifan; Xiang, Meizhen

2018-06-01

In this paper the macroscopic damping model for dynamical behavior of the structures with random polycrystalline configurations at micro-nano scales is established. First, the global motion equation of a crystal is decomposed into a set of motion equations with independent single degree of freedom (SDOF) along normal discrete modes, and then damping behavior is introduced into each SDOF motion. Through the interpolation of discrete modes, the continuous representation of damping effects for the crystal is obtained. Second, from energy conservation law the expression of the damping coefficient is derived, and the approximate formula of damping coefficient is given. Next, the continuous damping coefficient for polycrystalline cluster is expressed, the continuous dynamical equation with damping term is obtained, and then the concrete damping coefficients for a polycrystalline Cu sample are shown. Finally, by using statistical two-scale homogenization method, the macroscopic homogenized dynamical equation containing damping term for the structures with random polycrystalline configurations at micro-nano scales is set up.

Global estimation of ocean tides in deep and shallow waters from TOPEX/POSEIDON and numerical models with applications to geophysics, oceanography, and precision altimetry

NASA Astrophysics Data System (ADS)

Tierney, Craig Cristy

Presented here are several investigations of ocean tides derived from TOPEX/POSEIDON (T/P) altimetry and numerical models. The purpose of these investigations is to study the short wavelength features in the T/P data and to preserve these wavelengths in global ocean tide models that are accurate in shallow and deep waters. With these new estimates, effects of the tides on loading, Earth's rotation, and tidal energetics are studied. To preserve tidal structure, tides have been estimated along the ground track of T/P by the harmonic and response methods using 4.5 years of data. Results show the two along-track (AT) estimates agree with each other and with other tide models for those components with minimal aliasing problems. Comparisons to global models show that there is tidal structure in the T/P data that is not preserved with current gridding methods. Error estimates suggest there is accurate information in the T/P data from shallow waters that can be used to improve tidal models. It has been shown by Ray and Mitchum (1996) that the first mode baroclinic tide can be separated from AT tide estimates by filtering. This method has been used to estimate the first mode semidiurnal baroclinic tides globally. Estimates for M2 show good correlation with known regions of baroclinic tide generation. Using gridded, filtered AT estimates, a lower bound on the energy contained in the M2 baroclinic tide is 50 PJ. Inspired by the structure found in the AT estimates, a gridding method is presented that preserves tidal structure in the T/P data. These estimates are assimilated into a nonlinear, finite difference, global barotropic tidal model. Results from the 8 major tidal constituents show the model performs equivalently to other models in the deep waters, and is significantly better in the shallow waters. Crossover variance is reduced from 14 cm to 10 cm in the shallow waters. Comparisons to Earth rotation show good agreement to results from VLBI data. Tidal energetics computed from the models show good agreement with previous results. PE/KE ratios and quality factors are more consistent in each frequency band than in previous results.

Theoretical aspects of tidal and planetary wave propagation at thermospheric heights

NASA Technical Reports Server (NTRS)

Volland, H.; Mayr, H. G.

1977-01-01

A simple semiquantitative model is presented which allows analytic solutions of tidal and planetary wave propagation at thermospheric heights. This model is based on perturbation approximation and mode separation. The effects of viscosity and heat conduction are parameterized by Rayleigh friction and Newtonian cooling. Because of this simplicity, one gains a clear physical insight into basic features of atmospheric wave propagation. In particular, we discuss the meridional structures of pressure and horizontal wind (the solutions of Laplace's equation) and their modification due to dissipative effects at thermospheric heights. Furthermore, we solve the equations governing the height structure of the wave modes and arrive at a very simple asymptotic solution valid in the upper part of the thermosphere. That 'system transfer function' of the thermosphere allows one to estimate immediately the reaction of the thermospheric wave mode parameters such as pressure, temperature, and winds to an external heat source of arbitrary temporal and spatial distribution. Finally, the diffusion effects of the minor constituents due to the global wind circulation are discussed, and some results of numerical calculations are presented.

Resolvent analysis of shear flows using One-Way Navier-Stokes equations

NASA Astrophysics Data System (ADS)

Rigas, Georgios; Schmidt, Oliver; Towne, Aaron; Colonius, Tim

2017-11-01

For three-dimensional flows, questions of stability, receptivity, secondary flows, and coherent structures require the solution of large partial-derivative eigenvalue problems. Reduced-order approximations are thus required for engineering prediction since these problems are often computationally intractable or prohibitively expensive. For spatially slowly evolving flows, such as jets and boundary layers, the One-Way Navier-Stokes (OWNS) equations permit a fast spatial marching procedure that results in a huge reduction in computational cost. Here, an adjoint-based optimization framework is proposed and demonstrated for calculating optimal boundary conditions and optimal volumetric forcing. The corresponding optimal response modes are validated against modes obtained in terms of global resolvent analysis. For laminar base flows, the optimal modes reveal modal and non-modal transition mechanisms. For turbulent base flows, they predict the evolution of coherent structures in a statistical sense. Results from the application of the method to three-dimensional laminar wall-bounded flows and turbulent jets will be presented. This research was supported by the Office of Naval Research (N00014-16-1-2445) and Boeing Company (CT-BA-GTA-1).

Field programmable analog array based on current differencing transconductance amplifiers and its application to high-order filter

NASA Astrophysics Data System (ADS)

He, Haizhen; Luo, Rongming; Hu, Zhenhua; Wen, Lei

2017-07-01

A current-mode field programmable analog array(FPAA) is presented in this paper. The proposed FPAA consists of 9 configurable analog blocks(CABs) which are based on current differencing transconductance amplifiers (CDTA) and trans-impedance amplifier (TIA). The proposed CABs interconnect through global lines. These global lines contain some bridge switches, which used to reduce the parasitic capacitance effectively. High-order current-mode low-pass and band-pass filter with transmission zeros based on the simulation of general passive RLC ladder prototypes is proposed and mapped into the FPAA structure in order to demonstrate the versatility of the FPAA. These filters exhibit good performance on bandwidth. Filter's cutoff frequency can be tuned from 1.2MHz to 40MHz.The proposed FPAA is simulated in a standard Charted 0.18μm CMOS process with +/-1.2V power supply to confirm the presented theory, and the results have good agreement with the theoretical analysis.

Self-organization in multilayer network with adaptation mechanisms based on competition

NASA Astrophysics Data System (ADS)

Pitsik, Elena N.; Makarov, Vladimir V.; Nedaivozov, Vladimir O.; Kirsanov, Daniil V.; Goremyko, Mikhail V.

2018-04-01

The paper considers the phenomena of competition in multiplex network whose structure evolves corresponding to dynamics of it's elements, forming closed loop of self-learning with the aim to reach the optimal topology. Numerical analysis of proposed model shows that it is possible to obtain scale-invariant structures for corresponding parameters as well as the structures with homogeneous distribution of connections in the layers. Revealed phenomena emerges as the consequence of the self-organization processes related to structure-dynamical selflearning based on homeostasis and homophily, as well as the result of the competition between the network's layers for optimal topology. It was shown that in the mode of partial and cluster synchronization the network reaches scale-free topology of complex nature that is different from layer to layer. However, in the mode of global synchronization the homogeneous topologies on all layer of the network are observed. This phenomenon is tightly connected with the competitive processes that represent themselves as the natural mechanism of reaching the optimal topology of the links in variety of real-world systems.

Electron temperature structures associated with magnetic tearing modes in the Madison Symmetric Torus

NASA Astrophysics Data System (ADS)

Stephens, Hillary Dianne

Tearing mode induced magnetic islands have a significant impact on the thermal characteristics of magnetically confined plasmas such as those in the reversed-field-pinch. Using a state-of-the-art Thomson scattering (TS) diagnostic, electron temperature fluctuations correlated with magnetic tearing modes have been observed on the Madison Symmetric Torus reversed-field-pinch. The TS diagnostic consists of two independently triggerable Nd:YAG lasers that can each pulse up to 15 times each plasma discharge and 21 General Atomics polchromators equipped with avalanche photodiode modules. Detailed calibrations focusing on accuracy, ease of use and repeatability and in-situ measurements have been performed on the system. Electron temperature (Te) profiles are acquired at 25 kHz with 2 cm or less resolution along the minor radius, sufficient to measure the effect of an island on the profile as the island rotates by the measurement point. Bayesian data analysis techniques are developed and used to detect fluctuations over an ensemble of shots. Four cases are studied; standard plasmas in quiescent periods, through sawteeth, through core reconnection events and in plasmas where the tearing mode activity is decreased. With a spectrum of unstable tearing modes, remnant islands that tend to flatten the temperature profile are present in the core between sawtooth-like reconnection events. This flattening is characteristic of rapid parallel heat conduction along helical magnetic field lines. The spatial structure of the temperature fluctuations show that the location of the rational surface of the m/n = 1/6 tearing mode is significantly further in than equilibrium suggestions predict. The fluctuations also provide a measurement of the remnant island width which is significantly smaller than the predicted full island width. These correlated fluctuations disappear during both global and core reconnection events. In striking contrast to temperature flattening, a temperature gradient within an m/m = 1/5 island is observed just after a global reconnection event. This suggests local heating and relatively good confinement within the island. Local power balance calculations suggest reduced thermal transport within this island. During improved confinement plasmas with reduced stochasticity, brought about by a reduction in tearing instability temperature fluctuations correlated with magnetic modes are small with characteristic fluctuation amplitudes of T˜e/Te ˜ 2%.

Global gyrokinetic simulation of Tokamak edge pedestal instabilities.

PubMed

Wan, Weigang; Parker, Scott E; Chen, Yang; Yan, Zheng; Groebner, Richard J; Snyder, Philip B

2012-11-02

Global electromagnetic gyrokinetic simulations show the existence of near threshold conditions for both a high-n kinetic ballooning mode (KBM) and an intermediate-n kinetic version of peeling-ballooning mode (KPBM) in the edge pedestal of two DIII-D H-mode discharges. When the magnetic shear is reduced in a narrow region of steep pressure gradient, the KPBM is significantly stabilized, while the KBM is weakly destabilized and hence becomes the most-unstable mode. Collisions decrease the KBM's critical β and increase the growth rate.

Dynamic fracture mechanics analysis for an edge delamination crack

NASA Technical Reports Server (NTRS)

Rizzi, Stephen A.; Doyle, James F.

1994-01-01

A global/local analysis is applied to the problem of a panel with an edge delamination crack subject to an impulse loading to ascertain the dynamic J integral. The approach uses the spectral element method to obtain the global dynamic response and local resultants to obtain the J integral. The variation of J integral along the crack front is shown. The crack behavior is mixed mode (Mode 2 and Mode 3), but is dominated by the Mode 2 behavior.

RNA 3D Structure Modeling by Combination of Template-Based Method ModeRNA, Template-Free Folding with SimRNA, and Refinement with QRNAS.

PubMed

Piatkowski, Pawel; Kasprzak, Joanna M; Kumar, Deepak; Magnus, Marcin; Chojnowski, Grzegorz; Bujnicki, Janusz M

2016-01-01

RNA encompasses an essential part of all known forms of life. The functions of many RNA molecules are dependent on their ability to form complex three-dimensional (3D) structures. However, experimental determination of RNA 3D structures is laborious and challenging, and therefore, the majority of known RNAs remain structurally uncharacterized. To address this problem, computational structure prediction methods were developed that either utilize information derived from known structures of other RNA molecules (by way of template-based modeling) or attempt to simulate the physical process of RNA structure formation (by way of template-free modeling). All computational methods suffer from various limitations that make theoretical models less reliable than high-resolution experimentally determined structures. This chapter provides a protocol for computational modeling of RNA 3D structure that overcomes major limitations by combining two complementary approaches: template-based modeling that is capable of predicting global architectures based on similarity to other molecules but often fails to predict local unique features, and template-free modeling that can predict the local folding, but is limited to modeling the structure of relatively small molecules. Here, we combine the use of a template-based method ModeRNA with a template-free method SimRNA. ModeRNA requires a sequence alignment of the target RNA sequence to be modeled with a template of the known structure; it generates a model that predicts the structure of a conserved core and provides a starting point for modeling of variable regions. SimRNA can be used to fold small RNAs (<80 nt) without any additional structural information, and to refold parts of models for larger RNAs that have a correctly modeled core. ModeRNA can be either downloaded, compiled and run locally or run through a web interface at http://genesilico.pl/modernaserver/ . SimRNA is currently available to download for local use as a precompiled software package at http://genesilico.pl/software/stand-alone/simrna and as a web server at http://genesilico.pl/SimRNAweb . For model optimization we use QRNAS, available at http://genesilico.pl/qrnas .

Control of atomic transition rates via laser-light shaping

NASA Astrophysics Data System (ADS)

Jáuregui, R.

2015-04-01

A modular systematic analysis of the feasibility of modifying atomic transition rates by tailoring the electromagnetic field of an external coherent light source is presented. The formalism considers both the center of mass and internal degrees of freedom of the atom, and all properties of the field: frequency, angular spectrum, and polarization. General features of recoil effects for internal forbidden transitions are discussed. A comparative analysis of different structured light sources is explicitly worked out. It includes spherical waves, Gaussian beams, Laguerre-Gaussian beams, and propagation invariant beams with closed analytical expressions. It is shown that increments in the order of magnitude of the transition rates for Gaussian and Laguerre-Gaussian beams, with respect to those obtained in the paraxial limit, require waists of the order of the wavelength, while propagation invariant modes may considerably enhance transition rates under more favorable conditions. For transitions that can be naturally described as modifications of the atomic angular momentum, this enhancement is maximal (within propagation invariant beams) for Bessel modes, Mathieu modes can be used to entangle the internal and center-of-mass involved states, and Weber beams suppress this kind of transition unless they have a significant component of odd modes. However, if a recoil effect of the transition with an adequate symmetry is allowed, the global transition rate (center of mass and internal motion) can also be enhanced using Weber modes. The global analysis presented reinforces the idea that a better control of the transitions between internal atomic states requires both a proper control of the available states of the atomic center of mass, and shaping of the background electromagnetic field.

Optimal Variable-Structure Control Tracking of Spacecraft Maneuvers

NASA Technical Reports Server (NTRS)

Crassidis, John L.; Vadali, Srinivas R.; Markley, F. Landis

1999-01-01

An optimal control approach using variable-structure (sliding-mode) tracking for large angle spacecraft maneuvers is presented. The approach expands upon a previously derived regulation result using a quaternion parameterization for the kinematic equations of motion. This parameterization is used since it is free of singularities. The main contribution of this paper is the utilization of a simple term in the control law that produces a maneuver to the reference attitude trajectory in the shortest distance. Also, a multiplicative error quaternion between the desired and actual attitude is used to derive the control law. Sliding-mode switching surfaces are derived using an optimal-control analysis. Control laws are given using either external torque commands or reaction wheel commands. Global asymptotic stability is shown for both cases using a Lyapunov analysis. Simulation results are shown which use the new control strategy to stabilize the motion of the Microwave Anisotropy Probe spacecraft.

WEBGIS based CropWatch online agriculture monitoring system

NASA Astrophysics Data System (ADS)

Zhang, X.; Wu, B.; Zeng, H.; Zhang, M.; Yan, N.

2015-12-01

CropWatch, which was developed by the Institute of Remote Sensing and Digital Earth (RADI), Chinese Academy of Sciences (CAS), has achieved breakthrough results in the integration of methods, independence of the assessments and support to emergency response by periodically releasing global agricultural information. Taking advantages of the multi-source remote sensing data and the openness of the data sharing policies, CropWatch group reported their monitoring results by publishing four bulletins one year. In order to better analysis and generate the bulletin and provide an alternative way to access agricultural monitoring indicators and results in CropWatch, The CropWatch online system based on the WEBGIS techniques has been developed. Figure 1 shows the CropWatch online system structure and the system UI in Clustering mode. Data visualization is sorted into three different modes: Vector mode, Raster mode and Clustering mode. Vector mode provides the statistic value for all the indicators over each monitoring units which allows users to compare current situation with historical values (average, maximum, etc.). Users can compare the profiles of each indicator over the current growing season with the historical data in a chart by selecting the region of interest (ROI). Raster mode provides pixel based anomaly of CropWatch indicators globally. In this mode, users are able to zoom in to the regions where the notable anomaly was identified from statistic values in vector mode. Data from remote sensing image series at high temporal and low spatial resolution provide key information in agriculture monitoring. Clustering mode provides integrated information on different classes in maps, the corresponding profiles for each class and the percentage of area of each class to the total area of all classes. The time series data is categorized into limited types by the ISODATA algorithm. For each clustering type, pixels on the map, profiles, and percentage legend are all linked together. All the three visualization methods are applied to four scales including 65 monitoring and reporting units (MRUs), 7 major production zones (MPZs), 173 countries and sub-countries for 9 large countries. Agro-Climatic information, Agronomic information and indicators related with crop area, crop yield and crop production are provided.

Interpretation of frequency sweeping of n=0 mode in JET

NASA Astrophysics Data System (ADS)

Berk, H. L.

2006-04-01

Persistent rapid up and down frequency chirping modes with a toroidal mode number of zero (n=0) are observed in the JET tokamak when energetic ions, in the range of several hundred keV, are created by high field side ion cyclotron resonance frequency heating. Fokker-Planck calculations demonstrate that the heating method enables the formation of an energetically inverted ion distribution which supplies the free energy for the ions to excite a global geodesic acoustic mode (GGAM). The large frequency shifts of this mode are attributed to the formation of phase space structures whose frequencies, which are locked to an ion orbit resonance frequency, are forced to continually shift so that energetic particle energy can be released to counterbalance the energy dissipation present in the background plasma. In collaboration with C.J. Boswell, MIT; D. Borba, A.C.A. Figueiredo, Center for Nuclear Fusion Association; T. Johnson, Alfven Laboratory, KTH; M.F.F. Nave, Center for Nuclear Fusion Association; S.D. Pinches, Max Planck Institute for Plasma Physics; S.E. Sharapov, UKEA Culham Science Centre; and T. Zhou, University of Texas at Austin.

Development of pile foundation bias factors using observed behavior of platforms during Hurricane Andrew

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aggarwal, R.K.; Litton, R.W.; Cornell, C.A.

1996-12-31

The performance of more than 3,000 offshore platforms in the Gulf of Mexico was observed during the passage of Hurricane Andrew in August 1992. This event provided an opportunity to test the procedures used for platform analysis and design. A global bias was inferred for overall platform capacity and loads in the Andrew Joint Industry Project (JIP) Phase 1. It was predicted that the pile foundations of several platforms should have failed, but did not. These results indicated that the biases specific to foundation failure modes may be higher than those of jacket failure modes. The biases in predictions ofmore » foundation failure modes were therefore investigated further in this study. The work included capacity analysis and calibration of predictions with the observed behavior for 3 jacket platforms and 3 caissons using Bayesian updating. Bias factors for two foundation failure modes, lateral shear and overturning, were determined for each structure. Foundation capacity estimates using conventional methods were found to be conservatively biased overall.« less

A mechanics framework for a progressive failure methodology for laminated composites

NASA Technical Reports Server (NTRS)

Harris, Charles E.; Allen, David H.; Lo, David C.

1989-01-01

A laminate strength and life prediction methodology has been postulated for laminated composites which accounts for the progressive development of microstructural damage to structural failure. A damage dependent constitutive model predicts the stress redistribution in an average sense that accompanies damage development in laminates. Each mode of microstructural damage is represented by a second-order tensor valued internal state variable which is a strain like quantity. The mechanics framework together with the global-local strategy for predicting laminate strength and life is presented in the paper. The kinematic effects of damage are represented by effective engineering moduli in the global analysis and the results of the global analysis provide the boundary conditions for the local ply level stress analysis. Damage evolution laws are based on experimental results.

DFT simulation, quantum chemical electronic structure, spectroscopic and structure-activity investigations of 2-benzothiazole acetonitrile.

PubMed

Arjunan, V; Thillai Govindaraja, S; Jose, Sujin P; Mohan, S

2014-07-15

The Fourier transform infrared and FT-Raman spectra of 2-benzothiazole acetonitrile (BTAN) have been recorded in the range 4000-450 and 4000-100 cm(-1) respectively. The conformational analysis of the compound has been carried out to obtain the stable geometry of the compound. The complete vibrational assignment and analysis of the fundamental modes of the compound are carried out using the experimental FTIR and FT-Raman data and quantum chemical studies. The experimental vibrational frequencies are compared with the wavenumbers derived theoretically by B3LYP gradient calculations employing the standard 6-31G(**), high level 6-311++G(**) and cc-pVTZ basis sets. The structural parameters, thermodynamic properties and vibrational frequencies of the normal modes obtained from the B3LYP methods are in good agreement with the experimental data. The (1)H (400 MHz; CDCl3) and (13)C (100 MHz;CDCl3) nuclear magnetic resonance (NMR) spectra are also recorded. The electronic properties, the energies of the highest occupied and lowest unoccupied molecular orbitals are measured by DFT approach. The kinetic stability of the molecule has been determined from the frontier molecular orbital energy gap. The charges of the atoms and the structure-chemical reactivity relations of the compound are determined by its chemical potential, global hardness, global softness, electronegativity, electrophilicity and local reactivity descriptors by conceptual DFT methods. The non-linear optical properties of the compound have been discussed by measuring the polarisability and hyperpolarisability tensors. Copyright © 2014 Elsevier B.V. All rights reserved.

Shaking table experimentation on adjacent structures controlled by passive and semi-active MR dampers

NASA Astrophysics Data System (ADS)

Basili, M.; De Angelis, M.; Fraraccio, G.

2013-06-01

This paper presents the results of shaking table tests on adjacent structures controlled by passive and semi-active MR dampers. The aim was to demonstrate experimentally the effectiveness of passive and semi-active strategies in reducing structural vibrations due to seismic excitation. The physical model at issue was represented by two adjacent steel structures, respectively of 4 and 2 levels, connected at the second level by a MR damper. When the device operated in semi-active mode, an ON-OFF control algorithm, derived by the Lyapunov stability theory, was implemented and experimentally validated. Since the experimentation concerned adjacent structures, two control objectives have been reached: global and selective protection. In case of global protection, the attention was focused on protecting both structures, whereas, in case of selective protection, the attention was focused on protecting only one structure. For each objective the effectiveness of passive control has been compared with the situation of no control and then the effectiveness of semi-active control has been compared with the passive one. The quantities directly compared have been: measured displacements, accelerations and force-displacement of the MR damper, moreover some global response quantities have been estimated from experimental measures, which are the base share force and the base bending moment, the input energy and the energy dissipated by the device. In order to evaluate the effectiveness of the control action in both passive and semi-active case, an energy index EDI, previously defined and already often applied numerically, has been utilized. The aspects investigated in the experimentation have been: the implementation and validation of the control algorithm for selective and global protection, the MR damper input voltage influence, the kind of seismic input and its intensity.

Development of GENOA Progressive Failure Parallel Processing Software Systems

NASA Technical Reports Server (NTRS)

Abdi, Frank; Minnetyan, Levon

1999-01-01

A capability consisting of software development and experimental techniques has been developed and is described. The capability is integrated into GENOA-PFA to model polymer matrix composite (PMC) structures. The capability considers the physics and mechanics of composite materials and structure by integration of a hierarchical multilevel macro-scale (lamina, laminate, and structure) and micro scale (fiber, matrix, and interface) simulation analyses. The modeling involves (1) ply layering methodology utilizing FEM elements with through-the-thickness representation, (2) simulation of effects of material defects and conditions (e.g., voids, fiber waviness, and residual stress) on global static and cyclic fatigue strengths, (3) including material nonlinearities (by updating properties periodically) and geometrical nonlinearities (by Lagrangian updating), (4) simulating crack initiation. and growth to failure under static, cyclic, creep, and impact loads. (5) progressive fracture analysis to determine durability and damage tolerance. (6) identifying the percent contribution of various possible composite failure modes involved in critical damage events. and (7) determining sensitivities of failure modes to design parameters (e.g., fiber volume fraction, ply thickness, fiber orientation. and adhesive-bond thickness). GENOA-PFA progressive failure analysis is now ready for use to investigate the effects on structural responses to PMC material degradation from damage induced by static, cyclic (fatigue). creep, and impact loading in 2D/3D PMC structures subjected to hygrothermal environments. Its use will significantly facilitate targeting design parameter changes that will be most effective in reducing the probability of a given failure mode occurring.

Extreme ultraviolet diagnostic upgrades for kink mode control on the HBT-EP tokamak

NASA Astrophysics Data System (ADS)

Levesque, J. P.; Brooks, J. W.; Desanto, S.; Mauel, M. E.; Navratil, G. A.; Page, J. W.; Hansen, C. J.; Delgado-Aparicio, L.

2016-10-01

Optical diagnostics can provide non-invasive measurements of tokamak equilibria and the internal characteristics of MHD mode activity. We present research plans and ongoing progress on upgrading extreme ultraviolet (EUV) diagnostics in the HBT-EP tokamak. Four sets of 16 poloidal views will allow tomographic reconstruction of plasma emissivity and internal kink mode structure. Emission characteristics of naturally-occurring m/n = 2/1, 3/2, and 3/1 tearing and kink modes will be compared with expectations from a synthetic diagnostic. Coupling between internal and external modes leading up to disruptions is studied. The internal plasma response to external magnetic perturbations is investigated, and compared with magnetic response measurements. Correlation between internal emissivity and external magnetic measurements provides a global picture of long-wavelength MHD instabilities. Measurements are input to HBT-EP's GPU-based feedback system, allowing active feedback for kink modes using only optical sensors and both magnetic and edge current actuators. A separate two-color, 16-chord tangential system will be installed next year to allow reconstruction of temperature profiles and their fluctuations versus time. Supported by U.S. DOE Grant DE-FG02-86ER53222.

Comparative study of various normal mode analysis techniques based on partial Hessians.

PubMed

Ghysels, An; Van Speybroeck, Veronique; Pauwels, Ewald; Catak, Saron; Brooks, Bernard R; Van Neck, Dimitri; Waroquier, Michel

2010-04-15

Standard normal mode analysis becomes problematic for complex molecular systems, as a result of both the high computational cost and the excessive amount of information when the full Hessian matrix is used. Several partial Hessian methods have been proposed in the literature, yielding approximate normal modes. These methods aim at reducing the computational load and/or calculating only the relevant normal modes of interest in a specific application. Each method has its own (dis)advantages and application field but guidelines for the most suitable choice are lacking. We have investigated several partial Hessian methods, including the Partial Hessian Vibrational Analysis (PHVA), the Mobile Block Hessian (MBH), and the Vibrational Subsystem Analysis (VSA). In this article, we focus on the benefits and drawbacks of these methods, in terms of the reproduction of localized modes, collective modes, and the performance in partially optimized structures. We find that the PHVA is suitable for describing localized modes, that the MBH not only reproduces localized and global modes but also serves as an analysis tool of the spectrum, and that the VSA is mostly useful for the reproduction of the low frequency spectrum. These guidelines are illustrated with the reproduction of the localized amine-stretch, the spectrum of quinine and a bis-cinchona derivative, and the low frequency modes of the LAO binding protein. 2009 Wiley Periodicals, Inc.

Comparative Study of Various Normal Mode Analysis Techniques Based on Partial Hessians

PubMed Central

GHYSELS, AN; VAN SPEYBROECK, VERONIQUE; PAUWELS, EWALD; CATAK, SARON; BROOKS, BERNARD R.; VAN NECK, DIMITRI; WAROQUIER, MICHEL

2014-01-01

Standard normal mode analysis becomes problematic for complex molecular systems, as a result of both the high computational cost and the excessive amount of information when the full Hessian matrix is used. Several partial Hessian methods have been proposed in the literature, yielding approximate normal modes. These methods aim at reducing the computational load and/or calculating only the relevant normal modes of interest in a specific application. Each method has its own (dis)advantages and application field but guidelines for the most suitable choice are lacking. We have investigated several partial Hessian methods, including the Partial Hessian Vibrational Analysis (PHVA), the Mobile Block Hessian (MBH), and the Vibrational Subsystem Analysis (VSA). In this article, we focus on the benefits and drawbacks of these methods, in terms of the reproduction of localized modes, collective modes, and the performance in partially optimized structures. We find that the PHVA is suitable for describing localized modes, that the MBH not only reproduces localized and global modes but also serves as an analysis tool of the spectrum, and that the VSA is mostly useful for the reproduction of the low frequency spectrum. These guidelines are illustrated with the reproduction of the localized amine-stretch, the spectrum of quinine and a bis-cinchona derivative, and the low frequency modes of the LAO binding protein. PMID:19813181

Experimental and analytical investigation of dynamic characteristics of extension-twist-coupled composite tubular spars

NASA Astrophysics Data System (ADS)

Lake, Renee C.; Izadpanah, Amir P.; Baucom, Robert M.

1993-02-01

The results from a study aimed at improving the dynamic and aerodynamic characteristics of composite rotor blades through the use of extension-twist coupling are presented. A set of extension-twist-coupled composite spars was manufactured with four plies of graphite-epoxy cloth prepreg. These spars were noncircular in cross-section design and were therefore subject to warping deformations. Three different cross-sectional geometries were developed: D-shape, square, and flattened ellipse. Three spars of each type were fabricated to assess the degree of repeatability in the manufacturing process of extension-twist-coupled structures. Results from free-free vibration tests of the spars were compared with results from normal modes and frequency analyses of companion shell-finite-element models. Five global modes were identified within the frequency range from 0 to 2000 Hz for each spar. The experimental results for only one D-shape spar could be determined, however, and agreed within 13.8 percent of the analytical results. Frequencies corresponding to the five global modes for the three square spars agreed within 9.5, 11.6, and 8.5 percent of the respective analytical results and for the three elliptical spars agreed within 4.9, 7.7, and 9.6 percent of the respective analytical results.

Experimental and analytical investigation of dynamic characteristics of extension-twist-coupled composite tubular spars

NASA Technical Reports Server (NTRS)

Lake, Renee C.; Izadpanah, Amir P.; Baucom, Robert M.

1993-01-01

The results from a study aimed at improving the dynamic and aerodynamic characteristics of composite rotor blades through the use of extension-twist coupling are presented. A set of extension-twist-coupled composite spars was manufactured with four plies of graphite-epoxy cloth prepreg. These spars were noncircular in cross-section design and were therefore subject to warping deformations. Three different cross-sectional geometries were developed: D-shape, square, and flattened ellipse. Three spars of each type were fabricated to assess the degree of repeatability in the manufacturing process of extension-twist-coupled structures. Results from free-free vibration tests of the spars were compared with results from normal modes and frequency analyses of companion shell-finite-element models. Five global modes were identified within the frequency range from 0 to 2000 Hz for each spar. The experimental results for only one D-shape spar could be determined, however, and agreed within 13.8 percent of the analytical results. Frequencies corresponding to the five global modes for the three square spars agreed within 9.5, 11.6, and 8.5 percent of the respective analytical results and for the three elliptical spars agreed within 4.9, 7.7, and 9.6 percent of the respective analytical results.

Persistent ecological shifts in marine molluscan assemblages across the end-Cretaceous mass extinction.

PubMed

Aberhan, Martin; Kiessling, Wolfgang

2015-06-09

Contemporary biodiversity loss and population declines threaten to push the biosphere toward a tipping point with irreversible effects on ecosystem composition and function. As a potential example of a global-scale regime shift in the geological past, we assessed ecological changes across the end-Cretaceous mass extinction based on molluscan assemblages at four well-studied sites. By contrasting preextinction and postextinction rank abundance and numerical abundance in 19 molluscan modes of life--each defined as a unique combination of mobility level, feeding mode, and position relative to the substrate--we find distinct shifts in ecospace utilization, which significantly exceed predictions from null models. The magnitude of change in functional traits relative to normal temporal fluctuations at far-flung sites indicates that molluscan assemblages shifted to differently structured systems and faunal response was global. The strengths of temporal ecological shifts, however, are mostly within the range of preextinction site-to-site variability, demonstrating that local ecological turnover was similar to geographic variation over a broad latitudinal range. In conjunction with varied site-specific temporal patterns of individual modes of life, these spatial and temporal heterogeneities argue against a concerted phase shift of molluscan assemblages from one well-defined regime to another. At a broader ecological level, by contrast, congruent tendencies emerge and suggest deterministic processes. These patterns comprise the well-known increase of deposit-feeding mollusks in postextinction assemblages and increases in predators and predator-resistant modes of life, i.e., those characterized by elevated mobility and infaunal life habits.

Global-Local Analysis and Optimization of a Composite Civil Tilt-Rotor Wing

NASA Technical Reports Server (NTRS)

Rais-Rohani, Masound

1999-01-01

This report gives highlights of an investigation on the design and optimization of a thin composite wing box structure for a civil tilt-rotor aircraft. Two different concepts are considered for the cantilever wing: (a) a thin monolithic skin design, and (b) a thick sandwich skin design. Each concept is examined with three different skin ply patterns based on various combinations of 0, +/-45, and 90 degree plies. The global-local technique is used in the analysis and optimization of the six design models. The global analysis is based on a finite element model of the wing-pylon configuration while the local analysis uses a uniformly supported plate representing a wing panel. Design allowables include those on vibration frequencies, panel buckling, and material strength. The design optimization problem is formulated as one of minimizing the structural weight subject to strength, stiffness, and d,vnamic constraints. Six different loading conditions based on three different flight modes are considered in the design optimization. The results of this investigation reveal that of all the loading conditions the one corresponding to the rolling pull-out in the airplane mode is the most stringent. Also the frequency constraints are found to drive the skin thickness limits, rendering the buckling constraints inactive. The optimum skin ply pattern for the monolithic skin concept is found to be (((0/+/-45/90/(0/90)(sub 2))(sub s))(sub s), while for the sandwich skin concept the optimal ply pattern is found to be ((0/+/-45/90)(sub 2s))(sub s).

Simulation and stability analysis of oblique shock-wave/boundary-layer interactions at Mach 5.92

NASA Astrophysics Data System (ADS)

Hildebrand, Nathaniel; Dwivedi, Anubhav; Nichols, Joseph W.; Jovanović, Mihailo R.; Candler, Graham V.

2018-01-01

We investigate flow instability created by an oblique shock wave impinging on a Mach 5.92 laminar boundary layer at a transitional Reynolds number. The adverse pressure gradient of the oblique shock causes the boundary layer to separate from the wall, resulting in the formation of a recirculation bubble. For sufficiently large oblique shock angles, the recirculation bubble is unstable to three-dimensional perturbations and the flow bifurcates from its original laminar state. We utilize direct numerical simulation (DNS) and global stability analysis to show that this first occurs at a critical shock angle of θ =12 .9∘ . At bifurcation, the least-stable global mode is nonoscillatory and it takes place at a spanwise wave number β =0.25 , in good agreement with DNS results. Examination of the critical global mode reveals that it originates from an interaction between small spanwise corrugations at the base of the incident shock, streamwise vortices inside the recirculation bubble, and spanwise modulation of the bubble strength. The global mode drives the formation of long streamwise streaks downstream of the bubble. While the streaks may be amplified by either the lift-up effect or by Görtler instability, we show that centrifugal instability plays no role in the upstream self-sustaining mechanism of the global mode. We employ an adjoint solver to corroborate our physical interpretation by showing that the critical global mode is most sensitive to base flow modifications that are entirely contained inside the recirculation bubble.

Using Entropy Maximization to Understand the Determinants of Structural Dynamics beyond Native Contact Topology

PubMed Central

Lezon, Timothy R.; Bahar, Ivet

2010-01-01

Comparison of elastic network model predictions with experimental data has provided important insights on the dominant role of the network of inter-residue contacts in defining the global dynamics of proteins. Most of these studies have focused on interpreting the mean-square fluctuations of residues, or deriving the most collective, or softest, modes of motions that are known to be insensitive to structural and energetic details. However, with increasing structural data, we are in a position to perform a more critical assessment of the structure-dynamics relations in proteins, and gain a deeper understanding of the major determinants of not only the mean-square fluctuations and lowest frequency modes, but the covariance or the cross-correlations between residue fluctuations and the shapes of higher modes. A systematic study of a large set of NMR-determined proteins is analyzed using a novel method based on entropy maximization to demonstrate that the next level of refinement in the elastic network model description of proteins ought to take into consideration properties such as contact order (or sequential separation between contacting residues) and the secondary structure types of the interacting residues, whereas the types of amino acids do not play a critical role. Most importantly, an optimal description of observed cross-correlations requires the inclusion of destabilizing, as opposed to exclusively stabilizing, interactions, stipulating the functional significance of local frustration in imparting native-like dynamics. This study provides us with a deeper understanding of the structural basis of experimentally observed behavior, and opens the way to the development of more accurate models for exploring protein dynamics. PMID:20585542

Using entropy maximization to understand the determinants of structural dynamics beyond native contact topology.

PubMed

Lezon, Timothy R; Bahar, Ivet

2010-06-17

Comparison of elastic network model predictions with experimental data has provided important insights on the dominant role of the network of inter-residue contacts in defining the global dynamics of proteins. Most of these studies have focused on interpreting the mean-square fluctuations of residues, or deriving the most collective, or softest, modes of motions that are known to be insensitive to structural and energetic details. However, with increasing structural data, we are in a position to perform a more critical assessment of the structure-dynamics relations in proteins, and gain a deeper understanding of the major determinants of not only the mean-square fluctuations and lowest frequency modes, but the covariance or the cross-correlations between residue fluctuations and the shapes of higher modes. A systematic study of a large set of NMR-determined proteins is analyzed using a novel method based on entropy maximization to demonstrate that the next level of refinement in the elastic network model description of proteins ought to take into consideration properties such as contact order (or sequential separation between contacting residues) and the secondary structure types of the interacting residues, whereas the types of amino acids do not play a critical role. Most importantly, an optimal description of observed cross-correlations requires the inclusion of destabilizing, as opposed to exclusively stabilizing, interactions, stipulating the functional significance of local frustration in imparting native-like dynamics. This study provides us with a deeper understanding of the structural basis of experimentally observed behavior, and opens the way to the development of more accurate models for exploring protein dynamics.

Magnetic seismology of interstellar gas clouds: Unveiling a hidden dimension.

PubMed

Tritsis, Aris; Tassis, Konstantinos

2018-05-11

Stars and planets are formed inside dense interstellar molecular clouds by processes imprinted on the three-dimensional (3D) morphology of the clouds. Determining the 3D structure of interstellar clouds remains challenging because of projection effects and difficulties measuring the extent of the clouds along the line of sight. We report the detection of normal vibrational modes in the isolated interstellar cloud Musca, allowing determination of the 3D physical dimensions of the cloud. We found that Musca is vibrating globally, with the characteristic modes of a sheet viewed edge on, not the characteristics of a filament as previously supposed. We reconstructed the physical properties of Musca through 3D magnetohydrodynamic simulations, reproducing the observed normal modes and confirming a sheetlike morphology. Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Effects of eddy initial conditions on nonlinear forcing of planetary scale waves by amplifying baroclinic eddies

NASA Technical Reports Server (NTRS)

Young, Richard E.

1986-01-01

The previous study of Young and Villere concerning growth of planetary scale waves forced by wave-wave interactions of amplifying intermediate scale baroclinic eddies is extended to investigate effects of different eddy initial conditions. A global, spectral, primitive equation model is used for the calculations. For every set of eddy initial conditions considered, growth rates of planetary modes are considerably greater than growth rates computed from linear instability theory for a fixed zonally independent basic state. However, values of growth rates ranged over a factor of 3 depending on the particular set of eddy initial conditions used. Nonlinear forcing of planetary modes via wave-wave coupling becomes more important than baroclinic growth on the basic state at small values of the intermediate-scale modal amplitudes. The relative importance of direct transfer of kinetic energy from intermediate scales of motion to a planetary mode, compared to baroclinic conversion of available potential energy to kinetic energy within that planetary mode, depends on the individual case. In all cases, however, the transfer of either kinetic or available potential energy to the planetary modes was accomplished principally by wave-wave transfer from intermediate scale eddies, rather than from the zonally averaged state. The zonal wavenumber 2 planetary mode was prominent in all solutions, even in those for which eddy initial conditions were such that a different planetary mode was selectively forced at the start. General characteristics of the structural evolution of the planetary wave components of total heat and momentum flux, and modal structures themselves, were relatively insensitive to variations in eddy initial conditions, even though quantitative details varied from case to case.

Dynamical Structure of Madden-Julian Oscillation over Malay Peninsula

NASA Astrophysics Data System (ADS)

Djamil, Y. S.; Koh, T. Y.; Chandimala, J.; Teo, C. K.

2014-12-01

Madden-Julian Oscillation (MJO) is the dominant weather event in the intraseasonal time scale over Malay Peninsula region. The MJO signals are represented by the first two modes of radiosonde records extracted using Extended Empirical Orthogonal Function (EEOF) analyses which we label as Local Multivariate MJO (LMM). LMM is able to capture the spatio-temporal profile of MJO along the global tropics in all seasons. With the help of LMM, we clarify the dynamical and thermodynamical structure of the MJO over Malay Peninsula, including the unique "boomerang-shaped" feature in the time-height temperature profile identified in previous literature.

Quasi-periodic Fast-mode Wave Trains Within a Global EUV Wave and Sequential Transverse Oscillations Detected by SDO-AIA

NASA Technical Reports Server (NTRS)

Liu, Wei; Ofman, Leon; Nitta, Nariaki; Aschwanden, Markus J.; Schrijver, Carolus J.; Title, Alan M.; Tarbell, Theodore D.

2012-01-01

We present the first unambiguous detection of quasi-periodic wave trains within the broad pulse of a global EUV wave (so-called EIT wave) occurring on the limb. These wave trains, running ahead of the lateral coronal mass ejection (CME) front of 2-4 times slower, coherently travel to distances greater than approximately solar radius/2 along the solar surface, with initial velocities up to 1400 kilometers per second decelerating to approximately 650 kilometers per second. The rapid expansion of the CME initiated at an elevated height of 110 Mm produces a strong downward and lateral compression, which may play an important role in driving the primary EUV wave and shaping its front forwardly inclined toward the solar surface. The wave trains have a dominant 2 minute periodicity that matches the X-ray flare pulsations, suggesting a causal connection. The arrival of the leading EUV wave front at increasing distances produces an uninterrupted chain sequence of deflections and/or transverse (likely fast kink mode) oscillations of local structures, including a flux-rope coronal cavity and its embedded filament with delayed onsets consistent with the wave travel time at an elevated (by approximately 50%) velocity within it. This suggests that the EUV wave penetrates through a topological separatrix surface into the cavity, unexpected from CME-caused magnetic reconfiguration. These observations, when taken together, provide compelling evidence of the fast-mode MHD wave nature of the primary (outer) fast component of a global EUV wave, running ahead of the secondary (inner) slow component of CME-caused restructuring.

Detailed assessment of global transport-energy models’ structures and projections

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yeh, Sonia; Mishra, Gouri Shankar; Fulton, Lew

This paper focuses on comparing the frameworks and projections from four major global transportation models with considerable transportation technology and behavioral detail. We analyze and compare the modeling frameworks, underlying data, assumptions, intermediate parameters, and projections to identify the sources of divergence or consistency, as well as key knowledge gaps. We find that there are significant differences in the base-year data and key parameters for future projections, especially for developing countries. These include passenger and freight activity, mode shares, vehicle ownership rates, and even energy consumption by mode, particularly for shipping, aviation and trucking. This may be due in partmore » to a lack of previous efforts to do such consistency-checking and “bench-marking.” We find that the four models differ in terms of the relative roles of various mitigation strategies to achieve a 2°C / 450 ppm CO2e target: the economics-based integrated assessment models favor the use of low carbon fuels as the primary mitigation option followed by efficiency improvements, whereas transport-only and expert-based models favor efficiency improvements of vehicles followed by mode shifts. We offer recommendations for future modeling improvements focusing on (1) reducing data gaps; (2) translating the findings from this study into relevant policy implications such as feasibility of current policy goals, additional policy targets needed, regional vs. global reductions, etc.; (3) modeling strata of demographic groups to improve understanding of vehicle ownership levels, travel behavior, and urban vs. rural considerations; and (4) conducting coordinated efforts in aligning input assumptions and historical data, policy analysis, and modeling insights.« less

Computational simulation of progressive fracture in fiber composites

NASA Technical Reports Server (NTRS)

Chamis, C. C.

1986-01-01

Computational methods for simulating and predicting progressive fracture in fiber composite structures are presented. These methods are integrated into a computer code of modular form. The modules include composite mechanics, finite element analysis, and fracture criteria. The code is used to computationally simulate progressive fracture in composite laminates with and without defects. The simulation tracks the fracture progression in terms of modes initiating fracture, damage growth, and imminent global (catastrophic) laminate fracture.

Magnetorotational instability: nonmodal growth and the relationship of global modes to the shearing box

DOE Office of Scientific and Technical Information (OSTI.GOV)

Squire, J.; Bhattacharjee, A.

2014-12-10

We study magnetorotational instability (MRI) using nonmodal stability techniques. Despite the spectral instability of many forms of MRI, this proves to be a natural method of analysis that is well-suited to deal with the non-self-adjoint nature of the linear MRI equations. We find that the fastest growing linear MRI structures on both local and global domains can look very different from the eigenmodes, invariably resembling waves shearing with the background flow (shear waves). In addition, such structures can grow many times faster than the least stable eigenmode over long time periods, and be localized in a completely different region ofmore » space. These ideas lead—for both axisymmetric and non-axisymmetric modes—to a natural connection between the global MRI and the local shearing box approximation. By illustrating that the fastest growing global structure is well described by the ordinary differential equations (ODEs) governing a single shear wave, we find that the shearing box is a very sensible approximation for the linear MRI, contrary to many previous claims. Since the shear wave ODEs are most naturally understood using nonmodal analysis techniques, we conclude by analyzing local MRI growth over finite timescales using these methods. The strong growth over a wide range of wave-numbers suggests that nonmodal linear physics could be of fundamental importance in MRI turbulence.« less

Spectral fitting inversion of low-frequency normal modes with self-coupling and cross-coupling of toroidal and spheroidal multiplets: numerical experiments to estimate the isotropic and anisotropic velocity structures

NASA Astrophysics Data System (ADS)

Oda, Hitoshi

2016-06-01

The aspherical structure of the Earth is described in terms of lateral heterogeneity and anisotropy of the P- and S-wave velocities, density heterogeneity, ellipticity and rotation of the Earth and undulation of the discontinuity interfaces of the seismic wave velocities. Its structure significantly influences the normal mode spectra of the Earth's free oscillation in the form of cross-coupling between toroidal and spheroidal multiplets and self-coupling between the singlets forming them. Thus, the aspherical structure must be conversely estimated from the free oscillation spectra influenced by the cross-coupling and self-coupling. In the present study, we improve a spectral fitting inversion algorithm which was developed in a previous study to retrieve the global structures of the isotropic and anisotropic velocities of the P and S waves from the free oscillation spectra. The main improvement is that the geographical distribution of the intensity of the S-wave azimuthal anisotropy is represented by a nonlinear combination of structure coefficients for the anisotropic velocity structure, whereas in the previous study it was expanded into a generalized spherical harmonic series. Consequently, the improved inversion algorithm reduces the number of unknown parameters that must be determined compared to the previous inversion algorithm and employs a one-step inversion method by which the structure coefficients for the isotropic and anisotropic velocities are directly estimated from the fee oscillation spectra. The applicability of the improved inversion is examined by several numerical experiments using synthetic spectral data, which are produced by supposing a variety of isotropic and anisotropic velocity structures, earthquake source parameters and station-event pairs. Furthermore, the robustness of the inversion algorithm is investigated with respect to the back-ground noise contaminating the spectral data as well as truncating the series expansions by finite terms to represent the three-dimensional velocity structures. As a result, it is shown that the improved inversion can estimate not only the isotropic and anisotropic velocity structures but also the depth extent of the anisotropic regions in the Earth. In particular, the cross-coupling modes are essential to correctly estimate the isotropic and anisotropic velocity structures from the normal mode spectra. In addition, we argue that the effect of the seismic anisotropy is not negligible when estimating only the isotropic velocity structure from the spheroidal mode spectra.

Global-scale modes of surface temperature variability on interannual to century timescales

NASA Technical Reports Server (NTRS)

Mann, Michael E.; Park, Jeffrey

1994-01-01

Using 100 years of global temperature anomaly data, we have performed a singluar value decomposition of temperature variations in narrow frequency bands to isolate coherent spatio-temporal modes of global climate variability. Statistical significance is determined from confidence limits obtained by Monte Carlo simulations. Secular variance is dominated by a globally coherent trend; with nearly all grid points warming in phase at varying amplitude. A smaller, but significant, share of the secular variance corresponds to a pattern dominated by warming and subsequent cooling in the high latitude North Atlantic with a roughly centennial timescale. Spatial patterns associated with significant peaks in variance within a broad period range from 2.8 to 5.7 years exhibit characteristic El Nino-Southern Oscillation (ENSO) patterns. A recent transition to a regime of higher ENSO frequency is suggested by our analysis. An interdecadal mode in the 15-to-18 years period and a mode centered at 7-to-8 years period both exhibit predominantly a North Atlantic Oscillation (NAO) temperature pattern. A potentially significant decadal mode centered on 11-to-12 years period also exhibits an NAO temperature pattern and may be modulated by the century-scale North Atlantic variability.

United time-frequency spectroscopy for dynamics and global structure.

PubMed

Marian, Adela; Stowe, Matthew C; Lawall, John R; Felinto, Daniel; Ye, Jun

2004-12-17

Ultrashort laser pulses have thus far been used in two distinct modes. In the time domain, the pulses have allowed probing and manipulation of dynamics on a subpicosecond time scale. More recently, phase stabilization has produced optical frequency combs with absolute frequency reference across a broad bandwidth. Here we combine these two applications in a spectroscopic study of rubidium atoms. A wide-bandwidth, phase-stabilized femtosecond laser is used to monitor the real-time dynamic evolution of population transfer. Coherent pulse accumulation and quantum interference effects are observed and well modeled by theory. At the same time, the narrow linewidth of individual comb lines permits a precise and efficient determination of the global energy-level structure, providing a direct connection among the optical, terahertz, and radio-frequency domains. The mechanical action of the optical frequency comb on the atomic sample is explored and controlled, leading to precision spectroscopy with an appreciable reduction in systematic errors.

The Evolution of a Long-Lived Mesoscale Convective System Observed by GLM

NASA Astrophysics Data System (ADS)

Peterson, M. J.; Rudlosky, S. D.; Antunes, L.

2017-12-01

Continuous Geostationary Lightning Mapper (GLM) observations are used to document total lightning activity over the life cycle of a long-lived Mesoscale Convective System (MCS). MCS's may be few in number, but they are important for the Global Electric Circuit (GEC) because they sustain high lightning flash rates and quasi steady state conduction currents (Wilson currents) over longer time periods than ordinary isolated convection. The optical characteristics of the flashes produced by MCS's change over time, providing additional insights into the precipitation structure, convective mode, and evolution of the storm system. These insights are particularly useful in areas void of radar observations. Intercalibrated passive microwave radiometer data from the Global Precipitation Measurement (GPM) constellation also are used to estimate changes in Wilson current generation as the system evolves. These results highlight the role of MCS's in the GEC, and showcase how optical flash descriptors relate to thunderstorm organization, maturity, and structure.

Detection of Rotational Sequences for Global Oscillation Modes inside the Sun

NASA Technical Reports Server (NTRS)

Wolff, Charles L.; Niemann, Hasso B. (Technical Monitor)

2002-01-01

A very simple mathematical sequence is detected in a half century of thermal radio flux from the Sun. Since the only known physical cause of the sequence is global oscillations trapped in the nonconvecting solar interior, g-modes and probably r-modes are active. If so, their rotation frequencies are detected and some previously reported difference frequencies are confirmed with high confidence. All angular harmonics for 2 less than or = l less than or = 7 are detected as well as some others up to the limit l less than or = 14 resolvable by the observations (a Fourier spectrum of the 10.7 cm flux time series). The mean sidereal rotation of the nonconvecting interior is 428.2 nHz as averaged by g-modes and 429.8 nHz by the r-modes, indicating that g-mode energy is a bit more centrally concentrated. Helioseismology measures such rotation rates near 0.36R (R = solar radius), so the global modes would have about half their kinetic energy above and below that level. This, and the known log(r) energy dependence of most modes implies that these oscillations are significantly reflected near 0.18R, the same level at which sound speed measurements display a maximum departure from theoretical models.

Dynamic Impact Analyses and Tests of Concrete Overpacks - 13638

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lee, Sanghoon; Cho, Sang-Soon; Kim, Ki-Young

Concrete cask is an option for spent nuclear fuel interim storage which is prevailingly used in US. A concrete cask usually consists of metallic canister which confines the spent nuclear fuel and concrete overpack. When the overpack undergoes a severe missile impact which might be caused by a tornado or an aircraft crash, it should sustain acceptable level of structural integrity so that its radiation shielding capability and the retrievability of canister are maintained. Missile impact against a concrete overpack involves two damage modes, local damage and global damage. Local damage of concrete is usually evaluated by empirical formulas whilemore » the global damage is evaluated by finite element analysis. In many cases, those two damage modes are evaluated separately. In this research, a series of numerical simulations are performed using finite element analysis to evaluate the global damage of concrete overpack as well as its local damage under high speed missile impact. We consider two types of concrete overpack, one with steel in-cased concrete without reinforcement and the other with partially-confined reinforced concrete. The numerical simulation results are compared with test results and it is shown that appropriate modeling of material failure is crucial in this analysis and the results are highly dependent on the choice of failure parameters. (authors)« less

Global 3D radiation-hydrodynamics models of AGB stars. Effects of convection and radial pulsations on atmospheric structures

NASA Astrophysics Data System (ADS)

Freytag, B.; Liljegren, S.; Höfner, S.

2017-04-01

Context. Observations of asymptotic giant branch (AGB) stars with increasing spatial resolution reveal new layers of complexity of atmospheric processes on a variety of scales. Aims: To analyze the physical mechanisms that cause asymmetries and surface structures in observed images, we use detailed 3D dynamical simulations of AGB stars; these simulations self-consistently describe convection and pulsations. Methods: We used the CO5BOLD radiation-hydrodynamics code to produce an exploratory grid of global "star-in-a-box" models of the outer convective envelope and the inner atmosphere of AGB stars to study convection, pulsations, and shock waves and their dependence on stellar and numerical parameters. Results: The model dynamics are governed by the interaction of long-lasting giant convection cells, short-lived surface granules, and strong, radial, fundamental-mode pulsations. Radial pulsations and shorter wavelength, traveling, acoustic waves induce shocks on various scales in the atmosphere. Convection, waves, and shocks all contribute to the dynamical pressure and, thus, to an increase of the stellar radius and to a levitation of material into layers where dust can form. Consequently, the resulting relation of pulsation period and stellar radius is shifted toward larger radii compared to that of non-linear 1D models. The dependence of pulsation period on luminosity agrees well with observed relations. The interaction of the pulsation mode with the non-stationary convective flow causes occasional amplitude changes and phase shifts. The regularity of the pulsations decreases with decreasing gravity as the relative size of convection cells increases. The model stars do not have a well-defined surface. Instead, the light is emitted from a very extended inhomogeneous atmosphere with a complex dynamic pattern of high-contrast features. Conclusions: Our models self-consistently describe convection, convectively generated acoustic noise, fundamental-mode radial pulsations, and atmospheric shocks of various scales, which give rise to complex changing structures in the atmospheres of AGB stars.

System identification of a tied arch bridge using reference-based wireless sensor networks

NASA Astrophysics Data System (ADS)

Hietbrink, Colby; Whelan, Matthew J.

2012-04-01

Vibration-based methods of structural health monitoring are generally founded on the principle that localized damage to a structure would exhibit changes within the global dynamic response. Upon this basis, accelerometers provide a unique health monitoring strategy in that a distributed network of sensors provides the technical feasibility to isolate the onset of damage without requiring that any sensor be located exactly on or in close proximity to the damage. While in theory this may be sufficient, practical experience has shown significant improvement in the application of damage diagnostic routines when mode shapes characterized by strongly localized behavior of specific elements are captured by the instrumentation array. In traditional applications, this presents a challenge since the cost and complexity of cable-based systems often effectively limits the number of instrumented locations thereby constraining the modal parameter extraction to only global modal responses. The advent of the low-cost RF chip transceiver with wireless networking capabilities has afforded a means by which a substantial number of output locations can be measured through referencebased testing using large-scale wireless sensor networks. In the current study, this approach was applied to the Prairie du Chien Bridge over the Mississippi River to extract operational mode shapes with high spatial reconstruction, including strongly localized modes. The tied arch bridge was instrumented at over 230 locations with single-axis accelerometers conditioned and acquired over a high-rate lossless wireless sensor network with simultaneous sampling capabilities. Acquisition of the dynamic response of the web plates of the arch rib was specifically targeted within the instrumentation array for diagnostic purposes. Reference-based operational modal analysis of the full structure through data-driven stochastic subspace identification is presented alongside finite element analysis results for confirmation of modal parameter plausibility. Particular emphasis is placed on the identification and reconstruction of modal response with large contribution from the arch rib web plates.

[The modern patient in conditions of globalization].

PubMed

Jiliyayeva, Ye P

2013-01-01

The article makes an attempt to detect main characteristics of status of modern patient on the basis of analysis of Russian and international materials. Nowadays, patient plays an active role both in process of receiving medical care and in issues of health policy and public health. The patient has many rights and modes to defend them. At the national and international levels, many organizations of patients exist and their authority and impact only increase. The globalization effects on structure of patients, because it brought facilitation of trans-borders travel and resulted in development of medical tourism and increase of migration. The structure of patients becomes more various in its national and ethnic belonging, cultural and language characteristics. This trend generated new requirements to training of medical personnel and functioning of health services. The globalization also enhances social economic inequity between patients and hence complicates accessibility of high quality medical care to population. The main traits of modern patient are to be studied and analyzed on all levels with purpose to develop an important basis for successful planning, reformation and development of public health.

The leading mode of observed and CMIP5 ENSO-residual sea surface temperatures and associated changes in Indo-Pacific climate

USGS Publications Warehouse

Funk, Christopher C.; Hoell. Andrew,

2015-01-01

WPWM circulation changes appear consistent with a Matsuno–Gill-like atmospheric response associated with an ocean–atmosphere dipole structure contrasting increased (decreased) western (eastern) Pacific precipitation, SSHs, and ocean temperatures. These changes have enhanced the Walker circulation and modulated weather on a global scale. An AGCM experiment and the WPWM of global boreal spring precipitation indicate significant drying across parts of East Africa, the Middle East, the southwestern United States, southern South America, and Asia. Changes in the WPWM have tracked closely with precipitation and the increase in drought frequency over the semiarid and water-insecure areas of East Africa, the Middle East, and southwest Asia.

PFISR GPS tracking mode for researching high-latitude ionospheric electron density gradients associated with GPS scintillation

NASA Astrophysics Data System (ADS)

Loucks, D. C.; Palo, S. E.; Pilinski, M.; Crowley, G.; Azeem, S. I.; Hampton, D. L.

2016-12-01

Ionospheric behavior in the high-latitudes can significantly impact Ultra High Frequency (UHF) signals in the 300 MHz to 3 GHz band, resulting in degradation of Global Positioning System (GPS) position solutions and satellite communications interruptions. To address these operational concerns, a need arises to identify and understand the ionospheric structure that leads to disturbed conditions in the Arctic. Structures in the high-latitude ionosphere are known to change on the order of seconds or less, can be decameters to kilometers in scale, and elongate across magnetic field lines at auroral latitudes. Nominal operations at Poker Flat Incoherent Scatter Radar (PFISR) give temporal resolution on the order of minutes, and range resolution on the order of tens of kilometers, while specialized GPS receivers available for ionospheric sensing have a 100Hz observation sampling rate. One of these, ASTRA's Connected Autonomous Space Environment Sensor (CASES) is used for this study. We have developed a new GPS scintillation tracking mode for PFISR to address open scientific questions regarding temporal and spatial electron density gradients. The mode will be described, a number of experimental campaigns will be analyzed, and results and lessons learned will be presented.

Deciphering structure-activity relationships in a series of Tat/TAR inhibitors.

PubMed

Pascale, Lise; González, Alejandro López; Di Giorgio, Audrey; Gaysinski, Marc; Teixido Closa, Jordi; Tejedor, Roger Estrada; Azoulay, Stéphane; Patino, Nadia

2016-11-01

A series of pentameric "Polyamide Amino Acids" (PAAs) compounds derived from the same trimeric precursor have been synthesized and investigated as HIV TAR RNA ligands, in the absence and in the presence of a Tat fragment. All PAAs bind TAR with similar sub-micromolar affinities but their ability to compete efficiently with the Tat fragment strongly differs, IC50 ranging from 35 nM to >2 μM. While NMR and CD studies reveal that all PAA interact with TAR at the same site and induce globally the same RNA conformational change upon binding, a comparative thermodynamic study of PAA/TAR equilibria highlights distinct TAR binding modes for Tat competitor and non-competitor PAAs. This led us to suggest two distinct interaction modes that have been further validated by molecular modeling studies. While the binding of Tat competitor PAAs induces a contraction at the TAR bulge region, the binding of non-competitor ones widens it. This could account for the distinct PAA ability to compete with Tat fragment. Our work illustrates how comparative thermodynamic studies of a series of RNA ligands of same chemical family are of value for understanding their binding modes and for rationalizing structure-activity relationships.

Matching and selection of a specific subjective experience: conjugate matching and experience.

PubMed

Vimal, Ram Lakhan Pandey

2010-06-01

We incorporate the dual-mode concept in our dual-aspect PE-SE (proto-experience-subjective experience) framework. The two modes are: (1) the non-tilde mode that is the physical (material) and mental aspect of cognition (memory and attention) related feedback signals in a neural-network, which refers to the cognitive nearest past approaching towards present; and (2) the tilde mode that is the material and mental aspect of the feed-forward signals due to external environmental input and internal endogenous input, which pertains to the nearest future approaching towards present and is a entropy-reversed representation of non-tilde mode. Furthermore, one could argue that there are at least five sub-pathways in the stimulus-dependent feed-forward pathway and cognitive feedback pathway for information transfer in the brain dynamics: (i) classical axonal-dendritic neural sub-pathway including electromagnetic information field sub-pathway; (ii) quantum dendritic-dendritic microtubule (MT) (dendritic webs) sub-pathway; (iii) Ca(++)-related astroglial-neural sub-pathway; (iv) (a) the sub-pathway related to extrasynaptic signal transmission between fine distal dendrites of cortical neurons for the local subtle modulation due to voltages created by intradendritic dual-aspect charged surface effects within the Debye layer around endogenous structures such as microtubules (MT) and endoplasmic reticulum (ER) in dendrites, and (b) the sub-pathway related to extracellular volume transmission as fields of neural activity for the global modulation in axonal-dendritic neural sub-pathway; and (v) the sub-pathway related to information transmission via soliton propagation. We propose that: (i) the quantum conjugate matching between experiences in the mental aspect of the tilde mode and that of the non-tilde mode is related more to the mental aspect of the quantum microtubule-dendritic-web and less to that of the non-quantum sub-pathways; and (ii) the classical matching between experiences in the mental aspect of the tilde mode and that of the non-tilde mode is related to the mental aspect of the non-quantum sub-pathways (such as classical axonal-dendritic neural sub-pathway). In both cases, a specific SE is selected when the tilde mode interacts with the non-tilde mode to match for a specific SE, and when the necessary ingredients of SEs (such as the formation of neural networks, wakefulness, re-entry, attention, working memory, and so on) are satisfied. When the conjugate match is made between the two modes, the world-presence (Now) is disclosed. The material aspects in the tilde mode and that in the non-tilde mode are matched to link structure with function, whereas the mental aspects in the tilde mode and that in the non-tilde mode are matched to link experience with structure and function.

Assembly and analysis of eukaryotic Argonaute–RNA complexes in microRNA-target recognition

PubMed Central

Gan, Hin Hark; Gunsalus, Kristin C.

2015-01-01

Experimental studies have uncovered a variety of microRNA (miRNA)–target duplex structures that include perfect, imperfect and seedless duplexes. However, non-canonical binding modes from imperfect/seedless duplexes are not well predicted by computational approaches, which rely primarily on sequence and secondary structural features, nor have their tertiary structures been characterized because solved structures to date are limited to near perfect, straight duplexes in Argonautes (Agos). Here, we use structural modeling to examine the role of Ago dynamics in assembling viable eukaryotic miRNA-induced silencing complexes (miRISCs). We show that combinations of low-frequency, global modes of motion of Ago domains are required to accommodate RNA duplexes in model human and C. elegans Ago structures. Models of viable miRISCs imply that Ago adopts variable conformations at distinct target sites that generate distorted, imperfect miRNA-target duplexes. Ago's ability to accommodate a duplex is dependent on the region where structural distortions occur: distortions in solvent-exposed seed and 3′-end regions are less likely to produce steric clashes than those in the central duplex region. Energetic analyses of assembled miRISCs indicate that target recognition is also driven by favorable Ago-duplex interactions. Such structural insights into Ago loading and target recognition mechanisms may provide a more accurate assessment of miRNA function. PMID:26432829

Computational and experimental studies of microvascular void features for passive-adaptation of structural panel dynamic properties

NASA Astrophysics Data System (ADS)

Sears, Nicholas C.; Harne, Ryan L.

2018-01-01

The performance, integrity, and safety of built-up structural systems are critical to their effective employment in diverse engineering applications. In conflict with these goals, harmonic or random excitations of structural panels may promote large amplitude oscillations that are particularly harmful when excitation energies are concentrated around natural frequencies. This contributes to fatigue concerns, performance degradation, and failure. While studies have considered active or passive damping treatments that adapt material characteristics and configurations for structural control, it remains to be understood how vibration properties of structural panels may be tailored via internal material transitions. Motivated to fill this knowledge gap, this research explores an idea of adapting the static and dynamic material distribution of panels through embedded microvascular channels and strategically placed voids that permit the internal movement of fluids within the panels for structural dynamic control. Finite element model and experimental investigations probe how redistributing material in the form of microscale voids influences the global vibration modes and natural frequencies of structural panels. Through parameter studies, the relationships among void shape, number, size, and location are quantified towards their contribution to the changing structural dynamics. For the panel composition and boundary conditions considered in this report, the findings reveal that transferring material between strategically placed voids may result in eigenfrequency changes as great as 10.0, 5.0, and 7.4% for the first, second, and third modes, respectively.

A new pre-loaded beam geometric stiffness matrix with full rigid body capabilities

NASA Astrophysics Data System (ADS)

Bosela, P. A.; Fertis, D. G.; Shaker, F. J.

1992-09-01

Space structures, such as the Space Station solar arrays, must be extremely light-weight, flexible structures. Accurate prediction of the natural frequencies and mode shapes is essential for determining the structural adequacy of components, and designing a controls system. The tension pre-load in the 'blanket' of photovoltaic solar collectors, and the free/free boundary conditions of a structure in space, causes serious reservations on the use of standard finite element techniques of solution. In particular, a phenomenon known as 'grounding', or false stiffening, of the stiffness matrix occurs during rigid body rotation. The authors have previously shown that the grounding phenomenon is caused by a lack of rigid body rotational capability, and is typical in beam geometric stiffness matrices formulated by others, including those which contain higher order effects. The cause of the problem was identified as the force imbalance inherent in the formulations. In this paper, the authors develop a beam geometric stiffness matrix for a directed force problem, and show that the resultant global stiffness matrix contains complete rigid body mode capabilities, and performs very well in the diagonalization methodology customarily used in dynamic analysis.

Mobility power flow analysis of an L-shaped plate structure subjected to acoustic excitation

NASA Technical Reports Server (NTRS)

Cuschieri, J. M.

1989-01-01

An analytical investigation based on the Mobility Power Flow method is presented for the determination of the vibrational response and power flow for two coupled flat plate structures in an L-shaped configuration, subjected to acoustical excitation. The principle of the mobility power flow method consists of dividing the global structure into a series of subsystems coupled together using mobility functions. Each separate subsystem is analyzed independently to determine the structural mobility functions for the junction and excitation locations. The mobility functions, together with the characteristics of the junction between the subsystems, are then used to determine the response of the global structure and the power flow. In the coupled plate structure considered here, mobility power flow expressions are derived for excitation by an incident acoustic plane wave. In this case, the forces (acoustic pressures) acting on the structure are dependent on the response of the structure because of the scattered pressure component. The interaction between the structure and the fluid leads to the derivation of a corrected mode shape for the plates' normal surface velocity and also for the structure mobility functions. The determination of the scattered pressure components in the expressions for the power flow represents an additional component in the power flow balance for the source plate and the receiver plate. This component represents the radiated acoustical power from the plate structure.

Estimates of the Attenuation Rates of Baroclinic Tidal Energy Caused by Resonant Interactions Among Internal Waves based on the Weak Turbulence Theory

NASA Astrophysics Data System (ADS)

Onuki, Y.; Hibiya, T.

2016-02-01

The baroclinic tides are thought to be the dominant energy source for turbulent mixing in the ocean interior. In contrast to the geography of the energy conversion rates from the barotropic to baroclinic tides, which has been clarified in recent numerical studies, the global distribution of the energy sink for the resulting low-mode baroclinic tides remains obscure. A key to resolve this issue is the resonant wave-wave interactions, which transfer part of the baroclinic tidal energy to the background internal wave field enhancing the local energy dissipation rates. Recent field observations and numerical studies have pointed out that parametric subharmonic instability (PSI), one of the resonant interactions, causes significant energy sink of baroclinic tidal energy at mid-latitudes. The purpose of this study is to analyze the quantitative aspect of PSI to demonstrate the global distribution of the intensity of resonant wave interactions, namely, the attenuation rate of low-mode baroclinic tidal energy. Our approach is basically following the weak turbulence theory, which is the standard theory for resonant wave-wave interactions, where techniques of singular perturbation and statistical physics are employed. This study is, however, different from the classical theory in some points; we have reformulated the weak turbulence theory to be applicable to low-mode internal waves and also developed its numerical calculation method so that the effects of stratification profile and oceanic total depth can be taken into account. We have calculated the attenuation rate of low-mode baroclinic tidal waves interacting with the background Garrett-Munk internal wave field. The calculated results clearly show the rapid attenuation of baroclinic tidal energy at mid-latitudes, in agreement with the results from field observations and also show the zonal inhomogeneity of the attenuation rate caused by the density structures associated with the subtropical gyre. This study is expected to contribute to clarify the global distribution of the dissipation rates of baroclinic tidal energy.

Evidence of m = 1 density mode (plasma cam) in Saturn's rotating magnetosphere

NASA Astrophysics Data System (ADS)

Goldstein, J.; Waite, J. H.; Burch, J. L.; Livi, R.

2016-03-01

Cassini field and plasma data measured in the rotating Saturn Longitude System 3 (SLS3) coordinate system show positive evidence of structure whose dominant azimuthal wave number is m = 1: a long-lived, nonaxisymmetric, cam-shaped, global plasma distribution in Saturn's magnetosphere. Previous studies have identified evidence of this plasma cam in wave-derived electron density data and in Cassini Plasma Spectrometer (CAPS) W+ ion counts data. In this paper we report the first comprehensive analysis of CAPS ion moments data to identify the m = 1 density cam. We employ a multiyear, multispecies database of 685,678 CAPS density values, binned into a 1 RS by 4.8° discretized grid, spanning 4-19 RS. Fourier (harmonic) analysis shows that at most radial distances the dominant azimuthal mode is m = 1, for both W+ and H+ ion distributions. The majority (63%) of m = 1 ion peaks are clustered in an SLS3 quadrant centered at 330°. The plasma cam's existence has important implications for the global interchange-driven convection cycle and is a clue to solving the mystery of the rotational periodicities in Saturn's magnetosphere.

Global stability analysis of axisymmetric boundary layer over a circular cylinder

NASA Astrophysics Data System (ADS)

Bhoraniya, Ramesh; Vinod, Narayanan

2018-05-01

This paper presents a linear global stability analysis of the incompressible axisymmetric boundary layer on a circular cylinder. The base flow is parallel to the axis of the cylinder at inflow boundary. The pressure gradient is zero in the streamwise direction. The base flow velocity profile is fully non-parallel and non-similar in nature. The boundary layer grows continuously in the spatial directions. Linearized Navier-Stokes (LNS) equations are derived for the disturbance flow quantities in the cylindrical polar coordinates. The LNS equations along with homogeneous boundary conditions forms a generalized eigenvalues problem. Since the base flow is axisymmetric, the disturbances are periodic in azimuthal direction. Chebyshev spectral collocation method and Arnoldi's iterative algorithm is used for the solution of the general eigenvalues problem. The global temporal modes are computed for the range of Reynolds numbers and different azimuthal wave numbers. The largest imaginary part of the computed eigenmodes is negative, and hence, the flow is temporally stable. The spatial structure of the eigenmodes shows that the disturbance amplitudes grow in size and magnitude while they are moving towards downstream. The global modes of axisymmetric boundary layer are more stable than that of 2D flat-plate boundary layer at low Reynolds number. However, at higher Reynolds number they approach 2D flat-plate boundary layer. Thus, the damping effect of transverse curvature is significant at low Reynolds number. The wave-like nature of the disturbance amplitudes is found in the streamwise direction for the least stable eigenmodes.

Fundamental (f) oscillations in a magnetically coupled solar interior-atmosphere system - An analytical approach

NASA Astrophysics Data System (ADS)

Pintér, Balázs; Erdélyi, R.

2018-01-01

Solar fundamental (f) acoustic mode oscillations are investigated analytically in a magnetohydrodynamic (MHD) model. The model consists of three layers in planar geometry, representing the solar interior, the magnetic atmosphere, and a transitional layer sandwiched between them. Since we focus on the fundamental mode here, we assume the plasma is incompressible. A horizontal, canopy-like, magnetic field is introduced to the atmosphere, in which degenerated slow MHD waves can exist. The global (f-mode) oscillations can couple to local atmospheric Alfvén waves, resulting, e.g., in a frequency shift of the oscillations. The dispersion relation of the global oscillation mode is derived, and is solved analytically for the thin-transitional layer approximation and for the weak-field approximation. Analytical formulae are also provided for the frequency shifts due to the presence of a thin transitional layer and a weak atmospheric magnetic field. The analytical results generally indicate that, compared to the fundamental value (ω =√{ gk }), the mode frequency is reduced by the presence of an atmosphere by a few per cent. A thin transitional layer reduces the eigen-frequencies further by about an additional hundred microhertz. Finally, a weak atmospheric magnetic field can slightly, by a few percent, increase the frequency of the eigen-mode. Stronger magnetic fields, however, can increase the f-mode frequency by even up to ten per cent, which cannot be seen in observed data. The presence of a magnetic atmosphere in the three-layer model also introduces non-permitted propagation windows in the frequency spectrum; here, f-mode oscillations cannot exist with certain values of the harmonic degree. The eigen-frequencies can be sensitive to the background physical parameters, such as an atmospheric density scale-height or the rate of the plasma density drop at the photosphere. Such information, if ever observed with high-resolution instrumentation and inverted, could help to gain further insight into solar magnetic structures by means of solar magneto-seismology, and could provide further insight into the role of magnetism in solar oscillations.

Interdecadal variability in pan-Pacific and global SST, revisited

NASA Astrophysics Data System (ADS)

Tung, Ka-Kit; Chen, Xianyao; Zhou, Jiansong; Li, King-Fai

2018-05-01

Interest in the "Interdecadal Pacific Oscillation (IPO)" in the global SST has surged recently on suggestions that the Pacific may be the source of prominent interdecadal variations observed in the global-mean surface temperature possibly through the mechanism of low-frequency modulation of the interannual El Nino-Southern Oscillation (ENSO) phenomenon. IPO was defined by performing empirical orthogonal function (EOF) analysis of low-pass filtered SST. The low-pass filtering creates its unique set of mathematical problems—in particular, mode mixing—and has led to some questions, many unanswered. To understand what these EOFs are, we express them first in terms of the recently developed pairwise rotated EOFs of the unfiltered SST, which can largely separate the high and low frequency bands without resorting to filtering. As reported elsewhere, the leading rotated dynamical modes (after the global warming trend) of the unfiltered global SST are: ENSO, Pacific Decadal Oscillation (PDO), and Atlantic Multidecadal Oscillation (AMO). IPO is not among them. The leading principal component (PC) of the low-pass filtered global SST is usually defined as IPO and it is seen to comprise of ENSO, PDO and AMO in various proportions depending on the filter threshold. With decadal filtering, the contribution of the interannual ENSO is understandably negligible. The leading dynamical mode of the filtered global SST is mostly AMO, and therefore should not have been called the Interdecadal "Pacific" Oscillation. The leading dynamical mode of the filtered pan-Pacific SST is mostly PDO. This and other low-frequency variability that have the action center in the Pacific, from either the pan-Pacific or global SST, have near zero global mean.

Lineations and structural mapping of Io's paterae and mountains: Implications for internal stresses

NASA Astrophysics Data System (ADS)

Ahern, Alexandra A.; Radebaugh, Jani; Christiansen, Eric H.; Harris, Ronald A.; Tass, E. Shannon

2017-11-01

The mountains of Jupiter's volcanic moon Io are tall, steep, and tectonic in origin, yet their precise modes of formation and their associations with volcanic paterae are not fully understood. Global spatial statistics of paterae and mountains and their associated lineations reveal that both types of features are more common at low latitudes and tectonic lineations have preferred orientations, whereas straight patera margins are randomly oriented. Additionally, structurally controlled lineations tend to cluster with each other, and in areas of high concentrations these tectonic lineations are shorter in length than their global average. These results indicate that global-scale (rather than local or regional) processes are involved in forming Io's tectonic structures, but that the diversity of mountain characteristics and the collapse of paterae adjacent to mountain complexes are more locally controlled. Regional structural mapping of the Hi'iaka, Shamshu, Tohil, and Zal regions reveals Io's mountains reside in large, fault-bounded crustal blocks that have undergone modification through local responses of subsurface structures to variable stresses. Strike-slip motion along reactivated faults led to the formation of transpressional and transtensional features, creating tall peaks and low basins, some of which are now occupied by paterae. We propose Io's mountains result from a combination of crustal stresses involving global and local-scale processes, dominantly volcanic loading and tidal flexing. These stresses sometimes are oriented at oblique angles to pre-existing faults, reactivating them as reverse, normal, or strike-slip faults, modifying the large, cohesive crustal blocks that many of Io's mountains reside in. Further degradation of mountains and burial of faults has occurred from extensive volcanism, mass wasting, gravitational collapse, and erosion by sublimation and sapping of sulfur-rich layers. This model of fault-bounded blocks being modified by global stresses and local structural response accounts for the variation and patterns of mountain sizes, shapes, and orientations, along with their isolation and interactions with other features. It also provides a context for the operation and extent of global and regional stresses in shaping Io's surface.

Characterization of the low-frequency unsteadines in LES data of supersonic and hypersonic STBLI

NASA Astrophysics Data System (ADS)

Helm, Clara; Martin, Pino

2016-11-01

In a recent study, Priebe et al. (JFM 2016) used Dynamic Mode Decomposition (DMD) to analyze DNS data of a Mach 3 ramp-generated shock and turbulent boundary layer interaction (STBLI). The authors found that the reconstructed low-frequency DMD modes took on the form of Görtler-like vortices downstream of separation. The five reconstructed modes reproduced the low-frequency dynamics of the separation bubble accurately. Martín et al. (AIAA2016-3341) and Martín et al. (APS, DFD 2016) show that the low-frequency unsteadiness in STBLI results from an inviscid centrifugal instability similar to that found in separated subsonic and laminar flows, and that the turbulence is modulated but passive to the global mode. In this work we further characterize the Görtler-like vortices using LES data of Mach 3 and Mach 7 separated STBLIs. We find that the Görtler-like vortices are unsteady, and we quantify the wavelength, amplitude and the aperiodic development of these structures. This work is supported by the Air Force Office of Scientific Research under Grant AF9550-15-1-0284.

76 FR 60463 - 36(b)(1) Arms Sales Notification

Federal Register 2010, 2011, 2012, 2013, 2014

2011-09-29

...; Dual Mode/Global Positioning System Laser-Guided Bombs (16 GBU-10 Enhanced PAVEWAY II or GBU-56 Laser... Munitions (JDAMs) kits; 80 GBU-38 JDAM kits; Dual Mode/Global Positioning System Laser-Guided Bombs (16 GBU... class cluster bomb munition containing sensor fused sub-munitions that are designed to attack and defeat...

Hierarchical Letters in ASD: High Stimulus Variability under Different Attentional Modes

ERIC Educational Resources Information Center

Van der Hallen, Ruth; Vanmarcke, Steven; Noens, Ilse; Wagemans, Johan

2017-01-01

Studies using hierarchical patterns to test global precedence and local-global interference in individuals with ASD have produced mixed results. The current study focused on stimulus variability and locational uncertainty, while using different attentional modes. Two groups of 44 children with and without ASD completed a divided attention task as…

Globalization, EU-ification, and the New Mode of Educational Governance in Europe

ERIC Educational Resources Information Center

Daun, Holger

2011-01-01

The nature of European education systems and their respective modes of governing education were principally determined by factors internal to individual countries until the early 1980s. After the extension of the European Union and the acceleration of globalization, European countries have adopted some features that exist in many countries around…

Parametric uncertainties in global model simulations of black carbon column mass concentration

NASA Astrophysics Data System (ADS)

Pearce, Hana; Lee, Lindsay; Reddington, Carly; Carslaw, Ken; Mann, Graham

2016-04-01

Previous studies have deduced that the annual mean direct radiative forcing from black carbon (BC) aerosol may regionally be up to 5 W m-2 larger than expected due to underestimation of global atmospheric BC absorption in models. We have identified the magnitude and important sources of parametric uncertainty in simulations of BC column mass concentration from a global aerosol microphysics model (GLOMAP-Mode). A variance-based uncertainty analysis of 28 parameters has been performed, based on statistical emulators trained on model output from GLOMAP-Mode. This is the largest number of uncertain model parameters to be considered in a BC uncertainty analysis to date and covers primary aerosol emissions, microphysical processes and structural parameters related to the aerosol size distribution. We will present several recommendations for further research to improve the fidelity of simulated BC. In brief, we find that the standard deviation around the simulated mean annual BC column mass concentration varies globally between 2.5 x 10-9 g cm-2 in remote marine regions and 1.25 x 10-6 g cm-2 near emission sources due to parameter uncertainty Between 60 and 90% of the variance over source regions is due to uncertainty associated with primary BC emission fluxes, including biomass burning, fossil fuel and biofuel emissions. While the contributions to BC column uncertainty from microphysical processes, for example those related to dry and wet deposition, are increased over remote regions, we find that emissions still make an important contribution in these areas. It is likely, however, that the importance of structural model error, i.e. differences between models, is greater than parametric uncertainty. We have extended our analysis to emulate vertical BC profiles at several locations in the mid-Pacific Ocean and identify the parameters contributing to uncertainty in the vertical distribution of black carbon at these locations. We will present preliminary comparisons of emulated BC vertical profiles from the AeroCom multi-model ensemble and Hiaper Pole-to-Pole (HIPPO) observations.

Ideal MHD stability of double transport barrier plasmas in DIII-D

NASA Astrophysics Data System (ADS)

Li, G. Q.; Wang, S. J.; Lao, L. L.; Turnbull, A. D.; Chu, M. S.; Brennan, D. P.; Groebner, R. J.; Zhao, L.

2008-01-01

The ideal MHD stability for double transport barrier (DTB or DB) plasmas with varying edge and internal barrier width and height was investigated, using the ideal MHD stability code GATO. A moderate ratio of edge transport barriers (ETB) height to internal transport barriers (ITBs) height is found to be beneficial to MHD stability and the βN is limited by global low n instabilities. For moderate ITB width DB plasmas, if the ETB is weak, the stability is limited by n = 1 (n is the toroidal mode number) global mode; whereas if the ETB is strong it is limited by intermediate-n edge peeling-ballooning modes. Broadening the ITB can improve stability if the ITB half width wi lsim 0.3. For very broad ITB width plasmas the stability is limited by stability to a low n (n > 1) global mode.

Toroidal Alfvén eigenmode triggered by trapped anisotropic energetic particles in a toroidal resistive plasma with free boundary

NASA Astrophysics Data System (ADS)

Yang, S. X.; Hao, G. Z.; Liu, Y. Q.; Wang, Z. X.; Hu, Y. J.; Zhu, J. X.; He, H. D.; Wang, A. K.

2018-04-01

The toroidal Alfvén eigenmode (TAE), excited by trapped energetic particles (EPs), is numerically investigated in a tokamak plasma, using the non-perturbative magnetohydrodynamic-kinetic hybrid formulation based MARS-K code (Liu et al 2008 Phys. Plasmas 15 112503). Compared with the fixed boundary condition at the plasma edge, a free boundary enhances the critical value of the EPs kinetic contribution for driving the TAE. Free boundary also induces finite perturbations at the plasma edge as expected. An anisotropic distribution of EPs, in the particle pitch angle space, strongly enhances the instability and results in a more global mode structure, compared with the isotropic case. The plasma resistivity is also found to play a role in the EPs-destabilized TAE. In particular, the mode stability domain is mapped out, in the 2D parameter space of the plasma resistivity and a quantity defining the width of the particle distribution in pitch angle (for anisotropic distribution). A resonance layer in the poloidal mode structure, with the layer width increasing with the plasma resistivity, appears at the large width of the particle distribution in pitch angle space. A mode conversion, from the modified ideal kink by the EPs kinetic effect to the TAE, is also observed while increasing the birth energy of EPs. Computational results suggest that the TAE mode structure can be modified by certain key plasma parameters, such as the EPs kinetic contribution, the equilibrium pressure, the plasma resistivity, the distribution of EPs, as well as the birth energy of EPs. Such modification of the eigenmode structure can only be obtained following the non-perturbative hybrid approach (Wang et al 2013 Phys. Rev. Lett. 111 145003, Wang et al 2015 Phys. Plasmas 22 022509), as adopted in this study. More importantly, numerical results show that near the marginal stability point, the dominant poloidal harmonics of the TAE overlap with each other, and are localized at the tip positions of the Alfvén continua. This kind of TAE structure in high beta plasma with unstable ideal kink is substantially different from that of the conventional TAE.

Global Discontinuity Structure of the Mantle Transition Zone from Finite-Frequency Tomography of SS Precursors

NASA Astrophysics Data System (ADS)

Guo, Z.; Zhou, Y.

2017-12-01

We report global structure of the 410-km and 660-km discontinuities from finite-frequency tomography using frequency-dependent traveltime measurements of SS precursors recorded at the Global Seismological Network (GSN). Finite-frequency sensitivity kernels for discontinuity depth perturbations are calculated in the framework of traveling-wave mode coupling. We parametrize the global discontinuities using a set of spherical triangular grid points and solve the tomographic inverse problem based on singular value decomposition. Our global 410-km and 660-km discontinuity models reveal distinctly different characteristics beneath the oceans and subduction zones. In general, oceanic regions are associated with a thinner mantle transition zone and depth perturbations of the 410-km and 660-km discontinuities are anti-correlated, in agreement with a thermal origin and an overall warm and dry mantle beneath the oceans. The perturbations are not uniform throughout the oceans but show strong small-scale variations, indicating complex processes in the mantle transition zone. In major subduction zones (except for South America where data coverage is sparse), depth perturbations of the 410-km and 660-km discontinuities are correlated, with both the 410-km and the 660-km discontinuities occurring at greater depths. The distributions of the anomalies are consistent with cold stagnant slabs just above the 660-km discontinuity and ascending return flows in a superadiabatic upper mantle.

Tackling the conformational sampling of larger flexible compounds and macrocycles in pharmacology and drug discovery.

PubMed

Chen, I-Jen; Foloppe, Nicolas

2013-12-15

Computational conformational sampling underpins much of molecular modeling and design in pharmaceutical work. The sampling of smaller drug-like compounds has been an active area of research. However, few studies have tested in details the sampling of larger more flexible compounds, which are also relevant to drug discovery, including therapeutic peptides, macrocycles, and inhibitors of protein-protein interactions. Here, we investigate extensively mainstream conformational sampling methods on three carefully curated compound sets, namely the 'Drug-like', larger 'Flexible', and 'Macrocycle' compounds. These test molecules are chemically diverse with reliable X-ray protein-bound bioactive structures. The compared sampling methods include Stochastic Search and the recent LowModeMD from MOE, all the low-mode based approaches from MacroModel, and MD/LLMOD recently developed for macrocycles. In addition to default settings, key parameters of the sampling protocols were explored. The performance of the computational protocols was assessed via (i) the reproduction of the X-ray bioactive structures, (ii) the size, coverage and diversity of the output conformational ensembles, (iii) the compactness/extendedness of the conformers, and (iv) the ability to locate the global energy minimum. The influence of the stochastic nature of the searches on the results was also examined. Much better results were obtained by adopting search parameters enhanced over the default settings, while maintaining computational tractability. In MOE, the recent LowModeMD emerged as the method of choice. Mixed torsional/low-mode from MacroModel performed as well as LowModeMD, and MD/LLMOD performed well for macrocycles. The low-mode based approaches yielded very encouraging results with the flexible and macrocycle sets. Thus, one can productively tackle the computational conformational search of larger flexible compounds for drug discovery, including macrocycles. Copyright © 2013 Elsevier Ltd. All rights reserved.

A study of self organized criticality in ion temperature gradient mode driven gyrokinetic turbulence

NASA Astrophysics Data System (ADS)

Mavridis, M.; Isliker, H.; Vlahos, L.; Görler, T.; Jenko, F.; Told, D.

2014-10-01

An investigation on the characteristics of self organized criticality (Soc) in ITG mode driven turbulence is made, with the use of various statistical tools (histograms, power spectra, Hurst exponents estimated with the rescaled range analysis, and the structure function method). For this purpose, local non-linear gyrokinetic simulations of the cyclone base case scenario are performed with the GENE software package. Although most authors concentrate on global simulations, which seem to be a better choice for such an investigation, we use local simulations in an attempt to study the locally underlying mechanisms of Soc. We also study the structural properties of radially extended structures, with several tools (fractal dimension estimate, cluster analysis, and two dimensional autocorrelation function), in order to explore whether they can be characterized as avalanches. We find that, for large enough driving temperature gradients, the local simulations exhibit most of the features of Soc, with the exception of the probability distribution of observables, which show a tail, yet they are not of power-law form. The radial structures have the same radial extent at all temperature gradients examined; radial motion (transport) though appears only at large temperature gradients, in which case the radial structures can be interpreted as avalanches.

A study of self organized criticality in ion temperature gradient mode driven gyrokinetic turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mavridis, M.; Isliker, H.; Vlahos, L.

2014-10-15

An investigation on the characteristics of self organized criticality (Soc) in ITG mode driven turbulence is made, with the use of various statistical tools (histograms, power spectra, Hurst exponents estimated with the rescaled range analysis, and the structure function method). For this purpose, local non-linear gyrokinetic simulations of the cyclone base case scenario are performed with the GENE software package. Although most authors concentrate on global simulations, which seem to be a better choice for such an investigation, we use local simulations in an attempt to study the locally underlying mechanisms of Soc. We also study the structural properties ofmore » radially extended structures, with several tools (fractal dimension estimate, cluster analysis, and two dimensional autocorrelation function), in order to explore whether they can be characterized as avalanches. We find that, for large enough driving temperature gradients, the local simulations exhibit most of the features of Soc, with the exception of the probability distribution of observables, which show a tail, yet they are not of power-law form. The radial structures have the same radial extent at all temperature gradients examined; radial motion (transport) though appears only at large temperature gradients, in which case the radial structures can be interpreted as avalanches.« less

Ultraviolet photodissociation action spectroscopy of the N-pyridinium cation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansen, Christopher S., E-mail: csh297@uowmail.edu.au; Trevitt, Adam J., E-mail: adamt@uow.edu.au; Blanksby, Stephen J.

2015-01-07

The S{sub 1}←S{sub 0} electronic transition of the N-pyridinium ion (C{sub 5}H{sub 5}NH{sup +}) is investigated using ultraviolet photodissociation (PD) spectroscopy of the bare ion and also the N{sub 2}-tagged complex. Gas-phase N-pyridinium ions photodissociate by the loss of molecular hydrogen (H{sub 2}) in the photon energy range 37 000–45 000 cm{sup −1} with structurally diagnostic ion-molecule reactions identifying the 2-pyridinylium ion as the exclusive co-product. The photodissociation action spectra reveal vibronic details that, with the aid of electronic structure calculations, support the proposal that dissociation occurs through an intramolecular rearrangement on the ground electronic state following internal conversion. Quantum chemical calculationsmore » are used to analyze the measured spectra. Most of the vibronic features are attributed to progressions of totally symmetric ring deformation modes and out-of-plane modes active in the isomerization of the planar excited state towards the non-planar excited state global minimum.« less

White matter integrity in brain networks relevant to anxiety and depression: evidence from the human connectome project dataset.

PubMed

De Witte, Nele A J; Mueller, Sven C

2017-12-01

Anxiety and depression are associated with altered communication within global brain networks and between these networks and the amygdala. Functional connectivity studies demonstrate an effect of anxiety and depression on four critical brain networks involved in top-down attentional control (fronto-parietal network; FPN), salience detection and error monitoring (cingulo-opercular network; CON), bottom-up stimulus-driven attention (ventral attention network; VAN), and default mode (default mode network; DMN). However, structural evidence on the white matter (WM) connections within these networks and between these networks and the amygdala is lacking. The current study in a large healthy sample (n = 483) observed that higher trait anxiety-depression predicted lower WM integrity in the connections between amygdala and specific regions of the FPN, CON, VAN, and DMN. We discuss the possible consequences of these anatomical alterations for cognitive-affective functioning and underscore the need for further theory-driven research on individual differences in anxiety and depression on brain structure.

SPREADING LAYERS IN ACCRETING OBJECTS: ROLE OF ACOUSTIC WAVES FOR ANGULAR MOMENTUM TRANSPORT, MIXING, AND THERMODYNAMICS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Philippov, Alexander A.; Rafikov, Roman R.; Stone, James M., E-mail: sashaph@princeton.edu

Disk accretion at a high rate onto a white dwarf (WD) or a neutron star has been suggested to result in the formation of a spreading layer (SL)—a belt-like structure on the object's surface, in which the accreted matter steadily spreads in the poleward (meridional) direction while spinning down. To assess its basic characteristics, we perform two-dimensional hydrodynamic simulations of supersonic SLs in the relevant morphology with a simple prescription for cooling. We demonstrate that supersonic shear naturally present at the base of the SL inevitably drives sonic instability that gives rise to large-scale acoustic modes governing the evolution ofmore » the SL. These modes dominate the transport of momentum and energy, which is intrinsically global and cannot be characterized via some form of local effective viscosity (e.g., α-viscosity). The global nature of the wave-driven transport should have important implications for triggering Type I X-ray bursts in low-mass X-ray binaries. The nonlinear evolution of waves into a system of shocks drives effective rearrangement (sensitively depending on thermodynamical properties of the flow) and deceleration of the SL, which ultimately becomes transonic and susceptible to regular Kelvin–Helmholtz instability. We interpret this evolution in terms of the global structure of the SL and suggest that mixing of the SL material with the underlying stellar fluid should become effective only at intermediate latitudes on the accreting object's surface, where the flow has decelerated appreciably. In the near-equatorial regions the transport is dominated by acoustic waves and mixing is less efficient. We speculate that this latitudinal nonuniformity of mixing in accreting WDs may be linked to the observed bipolar morphology of classical nova ejecta.« less

Spectral-element global waveform tomography: A second-generation upper-mantle model

NASA Astrophysics Data System (ADS)

French, S. W.; Lekic, V.; Romanowicz, B. A.

2012-12-01

The SEMum model of Lekic and Romanowicz (2011a) was the first global upper-mantle VS model obtained using whole-waveform inversion with spectral element (SEM: Komatitsch and Vilotte, 1998) forward modeling of time domain three component waveforms. SEMum exhibits stronger amplitudes of heterogeneity in the upper 200km of the mantle compared to previous global models - particularly with respect to low-velocity anomalies. To make SEM-based waveform inversion tractable at global scales, SEMum was developed using: (1) a version of SEM coupled to 1D mode computation in the earth's core (C-SEM, Capdeville et al., 2003); (2) asymptotic normal-mode sensitivity kernels, incorporating multiple forward scattering and finite-frequency effects in the great-circle plane (NACT: Li and Romanowicz, 1995); and (3) a smooth anisotropic crustal layer of uniform 60km thickness, designed to match global surface-wave dispersion while reducing the cost of time integration in the SEM. The use of asymptotic kernels reduced the number of SEM computations considerably (≥ 3x) relative to purely numerical approaches (e.g. Tarantola, 1984), while remaining sufficiently accurate at the periods of interest (down to 60s). However, while the choice of a 60km crustal-layer thickness is justifiable in the continents, it can complicate interpretation of shallow oceanic upper-mantle structure. We here present an update to the SEMum model, designed primarily to address these concerns. The resulting model, SEMum2, was derived using a crustal layer that again fits global surface-wave dispersion, but with a more geologically consistent laterally varying thickness: approximately honoring Crust2.0 (Bassin, et al., 2000) Moho depth in the continents, while saturating at 30km in the oceans. We demonstrate that this approach does not bias our upper mantle model, which is constrained not only by fundamental mode surface waves, but also by overtone waveforms. We have also improved our data-selection and assimilation scheme, more readily allowing for additional and higher-quality data to be incorporated into our inversion as the model improves. Further, we have been able to refine the parameterization of the isotropic component of our model, previously limited by our ability to solve the large dense linear system that governs model updates (Tarantola and Valette, 1982). The construction of SEMum2 involved 3 additional inversion iterations away from SEMum. Overall, the combined effect of these improvements confirms and validates the general structure of the original SEMum. Model amplitudes remain an impressive feature in SEMum2, wherein peak-to-peak variation in VS can exceed 15% in close lateral juxtaposition. Further, many intriguing structures present in SEMum are now imaged with improved resolution in the updated model. In particular, the geographic extents of the anomalous oceanic cluster identified by Lekic and Romanowicz (2011b) are consistent with our findings and now allow us to further identify alternating bands of lower and higher velocities in the 200-300km depth range beneath the Pacific basin, with a characteristic spacing of ˜2000km normal to absolute plate motion. Possible dynamic interpretation of these and other features in the ocean basins is explored in a companion presentation (Romanowicz et al., this meeting).

Multi-scale mantle structure underneath the Americas from a new tomographic model of seismic shear velocity

NASA Astrophysics Data System (ADS)

Porritt, R. W.; Becker, T. W.; Auer, L.; Boschi, L.

2017-12-01

We present a whole-mantle, variable resolution, shear-wave tomography model based on newly available and existing seismological datasets including regional body-wave delay times and multi-mode Rayleigh and Love wave phase delays. Our body wave dataset includes 160,000 S wave delays used in the DNA13 regional tomographic model focused on the western and central US, 86,000 S and SKS delays measured on stations in western South America (Porritt et al., in prep), and 3,900,000 S+ phases measured by correlation between data observed at stations in the IRIS global networks (IU, II) and stations in the continuous US, against synthetic data generated with IRIS Syngine. The surface wave dataset includes fundamental mode and overtone Rayleigh wave data from Schaeffer and Levedev (2014), ambient noise derived Rayleigh wave and Love wave measurements from Ekstrom (2013), newly computed fundamental mode ambient noise Rayleigh wave phase delays for the continuous US up to July 2017, and other, previously published, measurements. These datasets, along with a data-adaptive parameterization utilized for the SAVANI model (Auer et al., 2014), should allow significantly finer-scale imaging than previous global models, rivaling that of regional-scale approaches, under the USArray footprint in the continuous US, while seamlessly integrating into a global model. We parameterize the model for both vertically (vSV) and horizontally (vSH) polarized shear velocities by accounting for the different sensitivities of the various phases and wave types. The resulting, radially anisotropic model should allow for a range of new geodynamic analysis, including estimates of mantle flow induced topography or seismic anisotropy, without generating artifacts due to edge effects, or requiring assumptions about the structure of the region outside the well resolved model space. Our model shows a number of features, including indications of the effects of edge-driven convection in the Cordillera and along the eastern margin and larger-scale convection due to the subduction of the Farallon slab and along the edge of the Laurentia cratonic margin.

π-Stacking, C-H/π, and halogen bonding interactions in bromobenzene and mixed bromobenzene-benzene clusters.

PubMed

Reid, Scott A; Nyambo, Silver; Muzangwa, Lloyd; Uhler, Brandon

2013-12-19

Noncovalent interactions play an important role in many chemical and biochemical processes. Building upon our recent study of the homoclusters of chlorobenzene, where π-π stacking and CH/π interactions were identified as the most important binding motifs, in this work we present a study of bromobenzene (PhBr) and mixed bromobenzene-benzene clusters. Electronic spectra in the region of the PhBr monomer S0-S1 (ππ*) transition were obtained using resonant two-photon ionization (R2PI) methods combined with time-of-flight mass analysis. As previously found for related systems, the PhBr cluster spectra show a broad feature whose center is red-shifted from the monomer absorption, and electronic structure calculations indicate the presence of multiple isomers and Franck-Condon activity in low-frequency intermolecular modes. Calculations at the M06-2X/aug-cc-pVDZ level find in total eight minimum energy structures for the PhBr dimer: four π-stacked structures differing in the relative orientation of the Br atoms (denoted D1-D4), one T-shaped structure (D5), and three halogen bonded structures (D6-D8). The calculated binding energies of these complexes, corrected for basis set superposition error (BSSE) and zero-point energy (ZPE), are in the range of -6 to -24 kJ/mol. Time-dependent density functional theory (TDDFT) calculations predict that these isomers absorb over a range that is roughly consistent with the breadth of the experimental spectrum. To examine the influence of dipole-dipole interaction, R2PI spectra were also obtained for the mixed PhBr···benzene dimer, where the spectral congestion is reduced and clear vibrational structure is observed. This structure is well-simulated by Franck-Condon calculations that incorporate the lowest frequency intermolecular modes. Calculations find four minimum energy structures for the mixed dimer and predict that the binding energy of the global minimum is reduced by ~30% relative to the global minimum PhBr dimer structure.

Global linkages between teleconnection patterns and the terrestrial biosphere

NASA Astrophysics Data System (ADS)

Dahlin, Kyla M.; Ault, Toby R.

2018-07-01

Interannual variability in the global carbon cycle is largely due to variations in carbon uptake by terrestrial ecosystems, yet linkages between climate variability and variability in the terrestrial carbon cycle are not well understood at the global scale. Using a 30-year satellite record of semi-monthly leaf area index (LAI), we show that four modes of climate variability - El Niño/Southern Oscillation, the North Atlantic Oscillation, the Atlantic Meridional Mode, and the Indian Ocean Dipole Mode - strongly impact interannual vegetation growth patterns, with 68% of the land surface impacted by at least one of these teleconnection patterns, yet the spatial distribution of these impacts is heterogeneous. Considering the patterns' impacts by biome, none has an exclusively positive or negative relationship with LAI. Our findings imply that future changes in the frequency and/or magnitude of teleconnection patterns will lead to diverse changes to the terrestrial biosphere and the global carbon cycle.

Viscous driving of global oscillations in accretion discs around black holes

NASA Astrophysics Data System (ADS)

Miranda, Ryan; Horák, Jiří; Lai, Dong

2015-01-01

We examine the role played by viscosity in the excitation of global oscillation modes (both axisymmetric and non-axisymmetric) in accretion discs around black holes using two-dimensional hydrodynamic simulations. The turbulent viscosity is modelled by the α-ansatz, with different equations of state. We consider both discs with transonic radial inflows across the innermost stable circular orbit, and stationary discs truncated by a reflecting wall at their inner edge, representing a magnetosphere. In transonic discs, viscosity can excite several types of global oscillation modes. These modes are either axisymmetric with frequencies close to multiples of the maximum radial epicyclic frequency κmax, non-axisymmetric with frequencies close to multiples of the innermost stable orbit frequency ΩISCO, or hybrid modes whose frequencies are linear combinations of these two frequencies. Small values of the viscosity parameter α primarily produce non-axisymmetric modes, while axisymmetric modes become dominant for large α. The excitation of these modes may be related to an instability of the sonic point, at which the radial infall speed is equal to the sound speed of the gas. In discs with a reflective inner boundary, we explore the effect of viscosity on trapped p modes which are intrinsically overstable due to the corotation resonance effect. The effect of viscosity is either to reduce the growth rates of these modes, or to completely suppress them and excite a new class of higher frequency modes. The latter requires that the dynamic viscosity scales positively with the disc surface density, indicating that it is a result of the classic viscous overstability effect.

Ab Initio Path Integral Molecular Dynamics Study of the Nuclear Quantum Effect on Out-of-Plane Ring Deformation of Hydrogen Maleate Anion.

PubMed

Kawashima, Yukio; Tachikawa, Masanori

2014-01-14

Ab initio path integral molecular dynamics (PIMD) simulation was performed to understand the nuclear quantum effect on the out-of-plane ring deformation of hydrogen maleate anion and investigate the existence of a stable structure with ring deformation, which was suggested in experimental observation (Fillaux et al., Chem. Phys. 1999, 120, 387-403). The isotope effect and the temperature effect are studied as well. We first investigated the nuclear quantum effect on the proton transfer. In static calculation and classical ab initio molecular dynamics simulations, the proton in the hydrogen bond is localized to either oxygen atom. On the other hand, the proton is located at the center of two oxygen atoms in quantum ab initio PIMD simulations. The nuclear quantum effect washes out the barrier of proton transfer. We next examined the nuclear quantum effect on the motion of hydrogen maleate anion. Principal component analysis revealed that the out-of-plane ring bending modes have dominant contribution to the entire molecular motion. In quantum ab initio PIMD simulations, structures with ring deformation were the global minimum for the deuterated isotope at 300 K. We analyzed the out-of-plane ring bending mode further and found that there are three minima along a ring distortion mode. We successfully found a stable structure with ring deformation of hydrogen maleate for the first time, to our knowledge, using theoretical calculation. The structures with ring deformation found in quantum simulation of the deuterated isotope allowed the proton transfer to occur more frequently than the planar structure. Static ab initio electronic structure calculation found that the structures with ring deformation have very small proton transfer barrier compared to the planar structure. We suggest that the "proton transfer driven" mechanism is the origin of stabilization for the structure with out-of-plane ring deformation.

Octree-based Global Earthquake Simulations

NASA Astrophysics Data System (ADS)

Ramirez-Guzman, L.; Juarez, A.; Bielak, J.; Salazar Monroy, E. F.

2017-12-01

Seismological research has motivated recent efforts to construct more accurate three-dimensional (3D) velocity models of the Earth, perform global simulations of wave propagation to validate models, and also to study the interaction of seismic fields with 3D structures. However, traditional methods for seismogram computation at global scales are limited by computational resources, relying primarily on traditional methods such as normal mode summation or two-dimensional numerical methods. We present an octree-based mesh finite element implementation to perform global earthquake simulations with 3D models using topography and bathymetry with a staircase approximation, as modeled by the Carnegie Mellon Finite Element Toolchain Hercules (Tu et al., 2006). To verify the implementation, we compared the synthetic seismograms computed in a spherical earth against waveforms calculated using normal mode summation for the Preliminary Earth Model (PREM) for a point source representation of the 2014 Mw 7.3 Papanoa, Mexico earthquake. We considered a 3 km-thick ocean layer for stations with predominantly oceanic paths. Eigen frequencies and eigen functions were computed for toroidal, radial, and spherical oscillations in the first 20 branches. Simulations are valid at frequencies up to 0.05 Hz. Matching among the waveforms computed by both approaches, especially for long period surface waves, is excellent. Additionally, we modeled the Mw 9.0 Tohoku-Oki earthquake using the USGS finite fault inversion. Topography and bathymetry from ETOPO1 are included in a mesh with more than 3 billion elements; constrained by the computational resources available. We compared estimated velocity and GPS synthetics against observations at regional and teleseismic stations of the Global Seismological Network and discuss the differences among observations and synthetics, revealing that heterogeneity, particularly in the crust, needs to be considered.

Theoretical analysis of three methods for calculating thermal insulation of clothing from thermal manikin.

PubMed

Huang, Jianhua

2012-07-01

There are three methods for calculating thermal insulation of clothing measured with a thermal manikin, i.e. the global method, the serial method, and the parallel method. Under the condition of homogeneous clothing insulation, these three methods yield the same insulation values. If the local heat flux is uniform over the manikin body, the global and serial methods provide the same insulation value. In most cases, the serial method gives a higher insulation value than the global method. There is a possibility that the insulation value from the serial method is lower than the value from the global method. The serial method always gives higher insulation value than the parallel method. The insulation value from the parallel method is higher or lower than the value from the global method, depending on the relationship between the heat loss distribution and the surface temperatures. Under the circumstance of uniform surface temperature distribution over the manikin body, the global and parallel methods give the same insulation value. If the constant surface temperature mode is used in the manikin test, the parallel method can be used to calculate the thermal insulation of clothing. If the constant heat flux mode is used in the manikin test, the serial method can be used to calculate the thermal insulation of clothing. The global method should be used for calculating thermal insulation of clothing for all manikin control modes, especially for thermal comfort regulation mode. The global method should be chosen by clothing manufacturers for labelling their products. The serial and parallel methods provide more information with respect to the different parts of clothing.

GLOBAL HELIOSEISMIC EVIDENCE FOR A DEEPLY PENETRATING SOLAR MERIDIONAL FLOW CONSISTING OF MULTIPLE FLOW CELLS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schad, A.; Roth, M.; Timmer, J., E-mail: ariane.schad@kis.uni-freiburg.de

2013-12-01

We use a novel global helioseismic analysis method to infer the meridional flow in the deep Solar interior. The method is based on the perturbation of eigenfunctions of Solar p modes due to meridional flow. We apply this method to time series obtained from Dopplergrams measured by the Michelson Doppler Imager aboard the Solar and Heliospheric Observatory covering the observation period 2004-2010. Our results show evidence that the meridional flow reaches down to the base of the convection zone. The flow profile has a complex spatial structure consisting of multiple flow cells distributed in depth and latitude. Toward the Solarmore » surface, our results are in good agreement with flow measurements from local helioseismology.« less

Stability characteristics of compressible boundary layers over thermo-mechanically compliant walls

NASA Astrophysics Data System (ADS)

Dettenrieder, Fabian; Bodony, Daniel

2017-11-01

Transition prediction at hypersonic flight conditions continues to be a challenge and results in conservative safety factors that increase vehicle weight. The weight and thus cost reduction of the outer skin panels promises significant impact; however, fluid-structure interaction due to unsteady perturbations in the laminar boundary layer regime has not been systematically studied at conditions relevant for reusable, hypersonic flight. In this talk, we develop and apply convective and global stability analyses for compressible boundary layers over thermo-mechanically compliant panels. This compliance is shown to change the convective stability of the boundary layer modes, with both stabilization and destabilization observed. Finite panel lengths are shown to affect the global stability properties of the boundary layer.

GPM Solar Array Gravity Negated Deployment Testing

NASA Technical Reports Server (NTRS)

Penn, Jonathan; Johnson, Chris; Lewis, Jesse; Dear, Trevin; Stewart, Alphonso

2014-01-01

NASA Goddard Space Flight Center (GSFC) successfully developed a g-negation support system for use on the solar arrays of the Global Precipitation Measurement (GPM) Satellite. This system provides full deployment capability at the subsystem and observatory levels. In addition, the system provides capability for deployed configuration first mode frequency verification testing. The system consists of air pads, a support structure, an air supply, and support tables. The g-negation support system was used to support all deployment activities for flight solar array deployment testing.

Facet-dependent solar ammonia synthesis of BiOCl nanosheets via a proton-assisted electron transfer pathway

NASA Astrophysics Data System (ADS)

Li, Hao; Shang, Jian; Shi, Jingu; Zhao, Kun; Zhang, Lizhi

2016-01-01

Under the pressure of a fossil fuels shortage and global climate change, solar ammonia synthesis and the need to develop N2 fixation under mild conditions is becoming more urgent need; however, their intrinsic mechanisms still remain unclear. Herein, we demonstrate that the kinetic inertia of N2 can be overcome using oxygen vacancies (OVs) of BiOCl as the catalytic centers to create lower energy molecular steps, which are amendable for the solar light driven N-N triple bond cleavage via a proton-assisted electron transfer pathway. Moreover, the distinct structures of OVs on different BiOCl facets strongly determine the N2 fixation pathways by influencing both the adsorption structure and the activation level of N2. The fixation of terminal end-on bound N2 on the OVs of BiOCl {001} facets follows an asymmetric distal mode by selectively generating NH3, while the reduction of side-on bridging N2 on the OVs of BiOCl {010} facets is more energetically favorable in a symmetric alternating mode to produce N2H4 as the main intermediate.Under the pressure of a fossil fuels shortage and global climate change, solar ammonia synthesis and the need to develop N2 fixation under mild conditions is becoming more urgent need; however, their intrinsic mechanisms still remain unclear. Herein, we demonstrate that the kinetic inertia of N2 can be overcome using oxygen vacancies (OVs) of BiOCl as the catalytic centers to create lower energy molecular steps, which are amendable for the solar light driven N-N triple bond cleavage via a proton-assisted electron transfer pathway. Moreover, the distinct structures of OVs on different BiOCl facets strongly determine the N2 fixation pathways by influencing both the adsorption structure and the activation level of N2. The fixation of terminal end-on bound N2 on the OVs of BiOCl {001} facets follows an asymmetric distal mode by selectively generating NH3, while the reduction of side-on bridging N2 on the OVs of BiOCl {010} facets is more energetically favorable in a symmetric alternating mode to produce N2H4 as the main intermediate. Electronic supplementary information (ESI) available: Other experimental details, additional SEM and TEM images, X-ray diffraction patterns (XRD), UV-Vis diffuse reflectance spectra (DRS), and additional data. See DOI: 10.1039/c5nr07380d

Global Instability on Laminar Separation Bubbles-Revisited

NASA Technical Reports Server (NTRS)

Theofilis, Vassilis; Rodriquez, Daniel; Smith, Douglas

2010-01-01

In the last 3 years, global linear instability of LSB has been revisited, using state-of-the-art hardware and algorithms. Eigenspectra of LSB flows have been understood and classified in branches of known and newly-discovered eigenmodes. Major achievements: World-largest numerical solutions of global eigenvalue problems are routinely performed. Key aerodynamic phenomena have been explained via critical point theory, applied to our global mode results. Theoretical foundation for control of LSB flows has been laid. Global mode of LSB at the origin of observable phenomena. U-separation on semi-infinite plate. Stall cells on (stalled) airfoil. Receptivity/Sensitivity/AFC feasible (practical?) via: Adjoint EVP solution. Direct/adjoint coupling (the Crete connection). Minor effect of compressibility on global instability in the subsonic compressible regime. Global instability analysis of LSB in realistic supersonic flows apparently quite some way down the horizon.

Global Low Frequency Protein Motions in Long-Range Allosteric Signaling

NASA Astrophysics Data System (ADS)

McLeish, Tom; Rogers, Thomas; Townsend, Philip; Burnell, David; Pohl, Ehmke; Wilson, Mark; Cann, Martin; Richards, Shane; Jones, Matthew

2015-03-01

We present a foundational theory for how allostery can occur as a function of low frequency dynamics without a change in protein structure. Elastic inhomogeneities allow entropic ``signalling at a distance.'' Remarkably, many globular proteins display just this class of elastic structure, in particular those that support allosteric binding of substrates (long-range co-operative effects between the binding sites of small molecules). Through multi-scale modelling of global normal modes we demonstrate negative co-operativity between the two cAMP ligands without change to the mean structure. Crucially, the value of the co-operativity is itself controlled by the interactions around a set of third allosteric ``control sites.'' The theory makes key experimental predictions, validated by analysis of variant proteins by a combination of structural biology and isothermal calorimetry. A quantitative description of allostery as a free energy landscape revealed a protein ``design space'' that identified the key inter- and intramolecular regulatory parameters that frame CRP/FNR family allostery. Furthermore, by analyzing naturally occurring CAP variants from diverse species, we demonstrate an evolutionary selection pressure to conserve residues crucial for allosteric control. The methodology establishes the means to engineer allosteric mechanisms that are driven by low frequency dynamics.

A variational approach to dynamics of flexible multibody systems

NASA Technical Reports Server (NTRS)

Wu, Shih-Chin; Haug, Edward J.; Kim, Sung-Soo

1989-01-01

This paper presents a variational formulation of constrained dynamics of flexible multibody systems, using a vector-variational calculus approach. Body reference frames are used to define global position and orientation of individual bodies in the system, located and oriented by position of its origin and Euler parameters, respectively. Small strain linear elastic deformation of individual components, relative to their body references frames, is defined by linear combinations of deformation modes that are induced by constraint reaction forces and normal modes of vibration. A library of kinematic couplings between flexible and/or rigid bodies is defined and analyzed. Variational equations of motion for multibody systems are obtained and reduced to mixed differential-algebraic equations of motion. A space structure that must deform during deployment is analyzed, to illustrate use of the methods developed.

High-latitude filtering in a global grid-point model using model normal modes. [Fourier filters for synoptic weather forecasting

NASA Technical Reports Server (NTRS)

Takacs, L. L.; Kalnay, E.; Navon, I. M.

1985-01-01

A normal modes expansion technique is applied to perform high latitude filtering in the GLAS fourth order global shallow water model with orography. The maximum permissible time step in the solution code is controlled by the frequency of the fastest propagating mode, which can be a gravity wave. Numerical methods are defined for filtering the data to identify the number of gravity modes to be included in the computations in order to obtain the appropriate zonal wavenumbers. The performances of the model with and without the filter, and with a time tendency and a prognostic field filter are tested with simulations of the Northern Hemisphere winter. The normal modes expansion technique is shown to leave the Rossby modes intact and permit 3-5 day predictions, a range not possible with the other high-latitude filters.

A three-dimensional multivariate representation of atmospheric variability

NASA Astrophysics Data System (ADS)

Žagar, Nedjeljka; Jelić, Damjan; Blaauw, Marten; Jesenko, Blaž

2016-04-01

A recently developed MODES software has been applied to the ECMWF analyses and forecasts and to several reanalysis datasets to describe the global variability of the balanced and inertio-gravity (IG) circulation across many scales by considering both mass and wind field and the whole model depth. In particular, the IG spectrum, which has only recently become observable in global datasets, can be studied simultaneously in the mass field and wind field and considering the whole model depth. MODES is open-access software that performs the normal-mode function decomposition of the 3D global datasets. Its application to the ERA Interim dataset reveals several aspects of the large-scale circulation after it has been partitioned into the linearly balanced and IG components. The global energy distribution is dominated by the balanced energy while the IG modes contribute around 8% of the total wave energy. However, on subsynoptic scales IG energy dominates and it is associated with the main features of tropical variability on all scales. The presented energy distribution and features of the zonally-averaged and equatorial circulation provide a reference for the intercomparison of several reanalysis datasets and for the validation of climate models. Features of the global IG circulation are compared in ERA Interim, MERRA and JRA reanalysis datasets and in several CMIP5 models. Since October 2014 the operational medium-range forecasts of the European Centre for Medium-Range Weather Forecasts (ECMWF) have been analyzed by MODES daily and an online archive of all the outputs is available at http://meteo.fmf.uni-lj.si/MODES. New outputs are made available daily based on the 00 UTC run and subsequent 12-hour forecasts up to 240-hour forecast. In addition to the energy spectra and horizontal circulation on selected levels for the balanced and IG components, the equatorial Kelvin waves are presented in time and space as the most energetic tropical IG modes propagating vertically and along the equator from its main generation regions in the upper troposphere over the Indian and Pacific region. The validation of the 10-day ECMWF forecasts with analyses in the modal space suggests a lack of variability in the tropics in the medium range. Reference: Žagar, N. et al., 2015: Normal-mode function representation of global 3-D data sets: open-access software for the atmospheric research community. Geosci. Model Dev., 8, 1169-1195, doi:10.5194/gmd-8-1169-2015 Žagar, N., R. Buizza, and J. Tribbia, 2015: A three-dimensional multivariate modal analysis of atmospheric predictability with application to the ECMWF ensemble. J. Atmos. Sci., 72, 4423-4444 The MODES software is available from http://meteo.fmf.uni-lj.si/MODES.

Replacing colour blindness with Depth Perception

NASA Astrophysics Data System (ADS)

Matthews, Jaymie M.

Until recently, most work on rapidly oscillating Ap (roAp) stars has concentrated on rapid single-bandpass photometry, which efficiently samples their short periods even with telescopes of modest aperture. Global campaigns of this nature have yielded eigenfrequency spectra essential to asteroseismology. However, we have reached a threshold where such data must be supplemented with rapid spectroscopy and photometry at many bandpasses if we are to (a) identify the modes in roAp stars, and (b) fully exploit those modes to probe the stars' atmospheres and interiors. Studies by Medupe & Kurtz and Matthews raise the prospect of using the wavelength dependence of oscillation amplitude to map pulsational dynamics and/or atmospheric structure in roAp stars. Also, precise measurements of velocity oscillations through rapid high-resolution spectroscopy suggest that spectral lines from different ions behave differently. Given the chemical stratification and inhomogeneities of peculiar atmospheres, this may be a way to map spherical harmonic modes in 3-D (i.e., depths of upper radial nodes and positions of the surface nodes).

Surface daytime net radiation estimation using artificial neural networks

DOE PAGES

Jiang, Bo; Zhang, Yi; Liang, Shunlin; ...

2014-11-11

Net all-wave surface radiation (R n) is one of the most important fundamental parameters in various applications. However, conventional R n measurements are difficult to collect because of the high cost and ongoing maintenance of recording instruments. Therefore, various empirical R n estimation models have been developed. This study presents the results of two artificial neural network (ANN) models (general regression neural networks (GRNN) and Neuroet) to estimate R n globally from multi-source data, including remotely sensed products, surface measurements, and meteorological reanalysis products. R n estimates provided by the two ANNs were tested against in-situ radiation measurements obtained frommore » 251 global sites between 1991–2010 both in global mode (all data were used to fit the models) and in conditional mode (the data were divided into four subsets and the models were fitted separately). Based on the results obtained from extensive experiments, it has been proved that the two ANNs were superior to linear-based empirical models in both global and conditional modes and that the GRNN performed better and was more stable than Neuroet. The GRNN estimates had a determination coefficient (R 2) of 0.92, a root mean square error (RMSE) of 34.27 W·m –2 , and a bias of –0.61 W·m –2 in global mode based on the validation dataset. In conclusion, ANN methods are a potentially powerful tool for global R n estimation.« less

An Analysis of Stochastic Jovian Oscillation Excitation by Moist Convection

NASA Astrophysics Data System (ADS)

Dederick, Ethan; Jackiewicz, Jason; Guillot, Tristan

2018-03-01

Recent observations of Jupiter have suggested the existence of global oscillatory modes at millihertz frequencies, yet the source mechanism responsible for driving these modes is still unknown. However, the energies necessary to produce observable surface oscillations have been predicted. Here we investigate if moist convection in Jupiter’s upper atmosphere can be responsible for driving the global oscillations and what moist convective energy requirements are necessary to achieve these theoretical mode energies and surface amplitudes. We begin by creating a one-dimensional moist convective cloud model and find that the available kinetic energy of the rising cloud column falls below theoretical estimates of oscillation energies. That is, mode excitation cannot occur with a single storm eruption. We then explore stochastic excitation scenarios of the oscillations by moist convective storms. We find that mode energies and amplitudes can reach theoretical estimates if the storm energy available to the modes is more than just kinetic. In order for the modes to be excited, we find that they require 5 × 1027 to 1028 erg per day. However, even for a large storm eruption each day, the available kinetic energy from the storms falls two orders of magnitude short of the required driving energy. Although our models may oversimplify the true complexity of the coupling between Jovian storms and global oscillations, our findings reveal that enough thermal energy is associated with moist convection to drive the modes, should it be available to them.

Vibration mode analysis of the proton exchange membrane fuel cell stack

NASA Astrophysics Data System (ADS)

Liu, B.; Liu, L. F.; Wei, M. Y.; Wu, C. W.

2016-11-01

Proton exchange membrane fuel cell (PEMFC) stacks usually undergo vibration during packing, transportation, and serving time, in particular for those used in the automobiles or portable equipment. To study the stack vibration response, based on finite element method (FEM), a mode analysis is carried out in the present paper. Using this method, we can distinguish the local vibration from the stack global modes, predict the vibration responses, such as deformed shape and direction, and discuss the effects of the clamping configuration and the clamping force magnitude on vibration modes. It is found that when the total clamping force remains the same, increasing the bolt number can strengthen the stack resistance to vibration in the clamping direction, but cannot obviously strengthen stack resistance to vibration in the translations perpendicular to clamping direction and the three axis rotations. Increasing the total clamping force can increase both of the stack global mode and the bolt local mode frequencies, but will decrease the gasket local mode frequency.

Teleconnections in the Presence of Climate Change: A Case Study of the Annular Modes

NASA Astrophysics Data System (ADS)

Gerber, Edwin; Baldwin, Mark

2010-05-01

Long model integrations of future and past climates present a problem for defining teleconnection patterns through Empirical Orthogonal Function (EOF) or correlation analysis when trends in the underlying climate begin to dominate the covariance structure. Similar issues may soon appear in observations as the record becomes longer, especially if climate trends accelerate. The Northern and Southern Annular Modes provide a prime example, because the poleward shift of the jet streams strongly projects onto these patterns, particularly in the Southern Hemisphere. Climate forecasts of the 21st century by chemistry climate models provide a case study. Computation of the annular modes in these long data sets with secular trends requires refinement of the standard definition of the annular mode, and a more robust procedure that allows for slowly varying trends is established and verified. The new procedure involves two key changes. First, the global mean geopotential height is removed at each time step before computing anomalies. This is particularly important high in the atmosphere, where seasonal variations in geopotential height become significant, and filters out trends due to changes in the temperature structure of the atmosphere. Pattern definition can be very sensitive near the tropopause, as regions of the atmosphere that used to be more of stratospheric character begin to take on tropospheric characteristics as the tropopause rises. The second change is to define anomalies relative to a slowly evolving seasonal climatology, so that the covariance structure reflects internal variability. Once these changes are accounted for, it is found that the zonal mean variability of the atmosphere stays remarkably constant, despite significant changes in the baseline climate forecast for the rest of the century. This stability of the internal variability makes it possible to relate trends in climate to teleconnections.

The Interplay of Internal and Forced Modes of Hadley Cell Expansion: Lessons from the Global Warming Hiatus

NASA Astrophysics Data System (ADS)

Amaya, D. J.; Siler, N.; Xie, S. P.; Miller, A. J.

2017-12-01

The poleward branches of the Hadley Cells show a robust shift poleward shift during the satellite era, leading to concerns over the possible encroachment of the globe's subtropical dry zones into currently temperate climates. The extent to which this trend is caused by anthropogenic forcing versus internal variability remains the subject of considerable debate. In this study, we us a joint EOF method to identify two distinct modes of Hadley Cell variability: (i) an anthropogenically-forced mode, which we identify using a 20-member simulation of the historical climate, and (ii) an internal mode, which identify using a 1000-year pre-industrial control simulation with a global climate model. The forced mode is found to be closely related to the TOA radiative imbalance and exhibits a long-term trend since 1860, while the internal mode is found to be essentially indistinguishable from the El Niño Southern Oscillation (ENSO). Together these two modes explain an average of 70% of the interannual variability seen in model "edge indices" over the historical period. Since 1980, the superposition of forced and internal modes has resulted in a period of accelerated Hadley Cell expansion and decelerated global warming (i.e., the "hiatus"). A comparison of the change in these modes since 1980 indicates that by 2013 the signal has emerged above the noise of internal variability in the Southern Hemisphere (SH), but not in the Northern Hemisphere (NH), with the latter also exhibiting strong zonal asymmetry, particularly in the North Atlantic. Our results highlight the important interplay of internal and forced modes of Hadley Cell width change and improve our understanding of the interannual variability and long-term trend seen in observations.

Genuine multipartite entanglement of symmetric Gaussian states: Strong monogamy, unitary localization, scaling behavior, and molecular sharing structure

NASA Astrophysics Data System (ADS)

Adesso, Gerardo; Illuminati, Fabrizio

2008-10-01

We investigate the structural aspects of genuine multipartite entanglement in Gaussian states of continuous variable systems. Generalizing the results of Adesso and Illuminati [Phys. Rev. Lett. 99, 150501 (2007)], we analyze whether the entanglement shared by blocks of modes distributes according to a strong monogamy law. This property, once established, allows us to quantify the genuine N -partite entanglement not encoded into 2,…,K,…,(N-1) -partite quantum correlations. Strong monogamy is numerically verified, and the explicit expression of the measure of residual genuine multipartite entanglement is analytically derived, by a recursive formula, for a subclass of Gaussian states. These are fully symmetric (permutation-invariant) states that are multipartitioned into blocks, each consisting of an arbitrarily assigned number of modes. We compute the genuine multipartite entanglement shared by the blocks of modes and investigate its scaling properties with the number and size of the blocks, the total number of modes, the global mixedness of the state, and the squeezed resources needed for state engineering. To achieve the exact computation of the block entanglement, we introduce and prove a general result of symplectic analysis: Correlations among K blocks in N -mode multisymmetric and multipartite Gaussian states, which are locally invariant under permutation of modes within each block, can be transformed by a local (with respect to the partition) unitary operation into correlations shared by K single modes, one per block, in effective nonsymmetric states where N-K modes are completely uncorrelated. Due to this theorem, the above results, such as the derivation of the explicit expression for the residual multipartite entanglement, its nonnegativity, and its scaling properties, extend to the subclass of non-symmetric Gaussian states that are obtained by the unitary localization of the multipartite entanglement of symmetric states. These findings provide strong numerical evidence that the distributed Gaussian entanglement is strongly monogamous under and possibly beyond specific symmetry constraints, and that the residual continuous-variable tangle is a proper measure of genuine multipartite entanglement for permutation-invariant Gaussian states under any multipartition of the modes.

Langevin Equation for DNA Dynamics

NASA Astrophysics Data System (ADS)

Grych, David; Copperman, Jeremy; Guenza, Marina

Under physiological conditions, DNA oligomers can contain well-ordered helical regions and also flexible single-stranded regions. We describe the site-specific motion of DNA with a modified Rouse-Zimm Langevin equation formalism that describes DNA as a coarse-grained polymeric chain with global structure and local flexibility. The approach has successfully described the protein dynamics in solution and has been extended to nucleic acids. Our approach provides diffusive mode analytical solutions for the dynamics of global rotational diffusion and internal motion. The internal DNA dynamics present a rich energy landscape that accounts for an interior where hydrogen bonds and base-stacking determine structure and experience limited solvent exposure. We have implemented several models incorporating different coarse-grained sites with anisotropic rotation, energy barrier crossing, and local friction coefficients that include a unique internal viscosity and our models reproduce dynamics predicted by atomistic simulations. The models reproduce bond autocorrelation along the sequence as compared to that directly calculated from atomistic molecular dynamics simulations. The Langevin equation approach captures the essence of DNA dynamics without a cumbersome atomistic representation.

Dyonic Flux Tube Structure of Nonperturbative QCD Vacuum

NASA Astrophysics Data System (ADS)

Chandola, H. C.; Pandey, H. C.

We study the flux tube structure of the nonperturbative QCD vacuum in terms of its dyonic excitations by using an infrared effective Lagrangian and show that the dyonic condensation of QCD vacuum has a close connection with the process of color confinement. Using the fiber bundle formulation of QCD, the magnetic symmetry condition is presented in a gauge covariant form and the gauge potential has been constructed in terms of the magnetic vectors on global sections. The dynamical breaking of the magnetic symmetry has been shown to lead the dyonic condensation of QCD vacuum in the infrared energy sector. Deriving the asymptotic solutions of the field equations in the dynamically broken phase, the dyonic flux tube structure of QCD vacuum is explored which has been shown to lead the confinement parameters in terms of the vector and scalar mass modes of the condensed vacuum. Evaluating the charge quantum numbers and energy associated with the dyonic flux tube solutions, the effect of electric excitation of monopole is analyzed using the Regge slope parameter (as an input parameter) and an enhancement in the dyonic pair correlations and the confining properties of QCD vacuum in its dyonically condensed mode has been demonstrated.

Hybrid CMS methods with model reduction for assembly of structures

NASA Technical Reports Server (NTRS)

Farhat, Charbel

1991-01-01

Future on-orbit structures will be designed and built in several stages, each with specific control requirements. Therefore there must be a methodology which can predict the dynamic characteristics of the assembled structure, based on the dynamic characteristics of the subassemblies and their interfaces. The methodology developed by CSC to address this issue is Hybrid Component Mode Synthesis (HCMS). HCMS distinguishes itself from standard component mode synthesis algorithms in the following features: (1) it does not require the subcomponents to have displacement compatible models, which makes it ideal for analyzing the deployment of heterogeneous flexible multibody systems, (2) it incorporates a second-level model reduction scheme at the interface, which makes it much faster than other algorithms and therefore suitable for control purposes, and (3) it does answer specific questions such as 'how does the global fundamental frequency vary if I change the physical parameters of substructure k by a specified amount?'. Because it is based on an energy principle rather than displacement compatibility, this methodology can also help the designer to define an assembly process. Current and future efforts are devoted to applying the HCMS method to design and analyze docking and berthing procedures in orbital construction.

Automated method for relating regional pulmonary structure and function: integration of dynamic multislice CT and thin-slice high-resolution CT

NASA Astrophysics Data System (ADS)

Tajik, Jehangir K.; Kugelmass, Steven D.; Hoffman, Eric A.

1993-07-01

We have developed a method utilizing x-ray CT for relating pulmonary perfusion to global and regional anatomy, allowing for detailed study of structure to function relationships. A thick slice, high temporal resolution mode is used to follow a bolus contrast agent for blood flow evaluation and is fused with a high spatial resolution, thin slice mode to obtain structure- function detail. To aid analysis of blood flow, we have developed a software module, for our image analysis package (VIDA), to produce the combined structure-function image. Color coded images representing blood flow, mean transit time, regional tissue content, regional blood volume, regional air content, etc. are generated and imbedded in the high resolution volume image. A text file containing these values along with a voxel's 3-D coordinates is also generated. User input can be minimized to identifying the location of the pulmonary artery from which the input function to a blood flow model is derived. Any flow model utilizing one input and one output function can be easily added to a user selectable list. We present examples from our physiologic based research findings to demonstrate the strengths of combining dynamic CT and HRCT relative to other scanning modalities to uniquely characterize pulmonary normal and pathophysiology.

Least square based sliding mode control for a quad-rotor helicopter and energy saving by chattering reduction

NASA Astrophysics Data System (ADS)

Sumantri, Bambang; Uchiyama, Naoki; Sano, Shigenori

2016-01-01

In this paper, a new control structure for a quad-rotor helicopter that employs the least squares method is introduced. This proposed algorithm solves the overdetermined problem of the control input for the translational motion of a quad-rotor helicopter. The algorithm allows all six degrees of freedom to be considered to calculate the control input. The sliding mode controller is applied to achieve robust tracking and stabilization. A saturation function is designed around a boundary layer to reduce the chattering phenomenon that is a common problem in sliding mode control. In order to improve the tracking performance, an integral sliding surface is designed. An energy saving effect because of chattering reduction is also evaluated. First, the dynamics of the quad-rotor helicopter is derived by the Newton-Euler formulation for a rigid body. Second, a constant plus proportional reaching law is introduced to increase the reaching rate of the sliding mode controller. Global stability of the proposed control strategy is guaranteed based on the Lyapunov's stability theory. Finally, the robustness and effectiveness of the proposed control system are demonstrated experimentally under wind gusts, and are compared with a regular sliding mode controller, a proportional-differential controller, and a proportional-integral-differential controller.

The Staphylococcus aureus pSK41 plasmid-encoded ArtA protein is a master regulator of plasmid transmission genes and contains a RHH motif used in alternate DNA-binding modes.

PubMed

Ni, Lisheng; Jensen, Slade O; Ky Tonthat, Nam; Berg, Tracey; Kwong, Stephen M; Guan, Fiona H X; Brown, Melissa H; Skurray, Ronald A; Firth, Neville; Schumacher, Maria A

2009-11-01

Plasmids harbored by Staphylococcus aureus are a major contributor to the spread of bacterial multi-drug resistance. Plasmid conjugation and partition are critical to the dissemination and inheritance of such plasmids. Here, we demonstrate that the ArtA protein encoded by the S. aureus multi-resistance plasmid pSK41 is a global transcriptional regulator of pSK41 genes, including those involved in conjugation and segregation. ArtA shows no sequence homology to any structurally characterized DNA-binding protein. To elucidate the mechanism by which it specifically recognizes its DNA site, we obtained the structure of ArtA bound to its cognate operator, ACATGACATG. The structure reveals that ArtA is representative of a new family of ribbon-helix-helix (RHH) DNA-binding proteins that contain extended, N-terminal basic motifs. Strikingly, unlike most well-studied RHH proteins ArtA binds its cognate operators as a dimer. However, we demonstrate that it is also able to recognize an atypical operator site by binding as a dimer-of-dimers and the extended N-terminal regions of ArtA were shown to be essential for this dimer-of-dimer binding mode. Thus, these data indicate that ArtA is a master regulator of genes critical for both horizontal and vertical transmission of pSK41 and that it can recognize DNA utilizing alternate binding modes.

The Staphylococcus aureus pSK41 plasmid-encoded ArtA protein is a master regulator of plasmid transmission genes and contains a RHH motif used in alternate DNA-binding modes

PubMed Central

Ni, Lisheng; Jensen, Slade O.; Ky Tonthat, Nam; Berg, Tracey; Kwong, Stephen M.; Guan, Fiona H. X.; Brown, Melissa H.; Skurray, Ronald A.; Firth, Neville; Schumacher, Maria A.

2009-01-01

Plasmids harbored by Staphylococcus aureus are a major contributor to the spread of bacterial multi-drug resistance. Plasmid conjugation and partition are critical to the dissemination and inheritance of such plasmids. Here, we demonstrate that the ArtA protein encoded by the S. aureus multi-resistance plasmid pSK41 is a global transcriptional regulator of pSK41 genes, including those involved in conjugation and segregation. ArtA shows no sequence homology to any structurally characterized DNA-binding protein. To elucidate the mechanism by which it specifically recognizes its DNA site, we obtained the structure of ArtA bound to its cognate operator, ACATGACATG. The structure reveals that ArtA is representative of a new family of ribbon–helix–helix (RHH) DNA-binding proteins that contain extended, N-terminal basic motifs. Strikingly, unlike most well-studied RHH proteins ArtA binds its cognate operators as a dimer. However, we demonstrate that it is also able to recognize an atypical operator site by binding as a dimer-of-dimers and the extended N-terminal regions of ArtA were shown to be essential for this dimer-of-dimer binding mode. Thus, these data indicate that ArtA is a master regulator of genes critical for both horizontal and vertical transmission of pSK41 and that it can recognize DNA utilizing alternate binding modes. PMID:19759211

Fractal structures in centrifugal flywheel governor system

NASA Astrophysics Data System (ADS)

Rao, Xiao-Bo; Chu, Yan-Dong; Lu-Xu; Chang, Ying-Xiang; Zhang, Jian-Gang

2017-09-01

The global structure of nonlinear response of mechanical centrifugal governor, forming in two-dimensional parameter space, is studied in this paper. By using three kinds of phases, we describe how responses of periodicity, quasi-periodicity and chaos organize some self-similarity structures with parameters varying. For several parameter combinations, the regular vibration shows fractal characteristic, that is, the comb-shaped self-similarity structure is generated by alternating periodic response with intermittent chaos, and Arnold's tongues embedded in quasi-periodic response are organized according to Stern-Brocot tree. In particular, a new type of mixed-mode oscillations (MMOs) is found in the periodic response. These unique structures reveal the natural connection of various responses between part and part, part and the whole in parameter space based on self-similarity of fractal. Meanwhile, the remarkable and unexpected results are to contribute a valid dynamic reference for practical applications with respect to mechanical centrifugal governor.

Low-Frequency Oscillations and Transport Processes Induced by Multiscale Transverse Structures in the Polar Wind Outflow: A Three-Dimensional Simulation

NASA Technical Reports Server (NTRS)

Ganguli, Supriya B.; Gavrishchaka, Valeriy V.

1999-01-01

Multiscale transverse structures in the magnetic-field-aligned flows have been frequently observed in the auroral region by FAST and Freja satellites. A number of multiscale processes, such as broadband low-frequency oscillations and various cross-field transport effects are well correlated with these structures. To study these effects, we have used our three-dimensional multifluid model with multiscale transverse inhomogeneities in the initial velocity profile. Self-consistent-frequency mode driven by local transverse gradients in the generation of the low field-aligned ion flow and associated transport processes were simulated. Effects of particle interaction with the self-consistent time-dependent three-dimensional wave potential have been modeled using a distribution of test particles. For typical polar wind conditions it has been found that even large-scale (approximately 50 - 100 km) transverse inhomogeneities in the flow can generate low-frequency oscillations that lead to significant flow modifications, cross-field particle diffusion, and other transport effects. It has also been shown that even small-amplitude (approximately 10 - 20%) short-scale (approximately 10 km) modulations of the original large-scale flow profile significantly increases low-frequency mode generation and associated cross-field transport, not only at the local spatial scales imposed by the modulations but also on global scales. Note that this wave-induced cross-field transport is not included in any of the global numerical models of the ionosphere, ionosphere-thermosphere, or ionosphere-polar wind. The simulation results indicate that the wave-induced cross-field transport not only affects the ion outflow rates but also leads to a significant broadening of particle phase-space distribution and transverse particle diffusion.

Identification of Characterization Factor for Power System Oscillation Based on Multiple Synchronized Phasor Measurements

NASA Astrophysics Data System (ADS)

Hashiguchi, Takuhei; Watanabe, Masayuki; Matsushita, Akihiro; Mitani, Yasunori; Saeki, Osamu; Tsuji, Kiichiro; Hojo, Masahide; Ukai, Hiroyuki

Electric power systems in Japan are composed of remote and distributed location of generators and loads mainly concentrated in large demand areas. The structures having long distance transmission tend to produce heavy power flow with increasing electric power demand. In addition, some independent power producers (IPP) and power producer and suppliers (PPS) are participating in the power generation business, which makes power system dynamics more complex. However, there was little observation as a whole power system. In this paper the authors present a global monitoring system of power system dynamics by using the synchronized phasor measurement of demand side outlets. Phasor Measurement Units (PMU) are synchronized based on the global positioning system (GPS). The purpose of this paper is to show oscillation characteristics and methods for processing original data obtained from PMU after certain power system disturbances triggered by some accidents. This analysis resulted in the observation of the lowest and the second lowest frequency mode. The derivation of eigenvalue with two degree of freedom model brings a monitoring of two oscillation modes. Signal processing based on Wavelet analysis and simulation studies to illustrate the obtained phenomena are demonstrated in detail.

Cyclic thermal signature in a global MHD simulation of solar convection

NASA Astrophysics Data System (ADS)

Cossette, J.; Charbonneau, P.; Smolarkiewicz, P. K.

2013-12-01

Space-based observations have clearly established that total solar irradiance (TSI) varies on time scales from minutes to days and months as well as on the longer time scale of the 11-year solar cycle. The most conspicuous of these variations is arguably the slight increase of TSI (0.1%) at solar maxima relative to solar minima. Models that include contributions from surface solar magnetism alone (i.e. sunspots, faculae and magnetic network) have been very successful at reproducing the observed TSI fluctuations on time scales shorter than a year, but leave some doubts as to the origin of the longer decadal fluctuations. In particular, one school of thought argues that surface magnetism alone can explain the entire TSI variance; see (Lean & al. 1998, ApJ, 492, 390), whereas; the other emphasizes on taking into account the effect of a global modulation of solar thermal structure by magnetic activity; see (Li & al. 2003, ApJ, 591, 1267). Observationally, the potential for the occurrence of magnetically-modulated global structural changes is supported by a positive correlation between p-mode oscillation frequencies and the TSI cycle as well as by recent evidence for a long-term trend in the TSI record that is not seen in indicators of surface magnetism; see (Bhatnagar & al. 1999, ApJ, 521, 885; Fröhlich 2013, Space Sci Rev,176, 237). Additionally, 1D structural solar models have demonstrated that the inclusion of a magnetically-modulated turbulent mechanism could explain the observed p-mode oscillation frequency changes with great accuracy. However, these models relied upon an ad-hoc parametrization of the alleged process and therefore obtaining a complete physical picture of the modulating mechanism requires solving the equations governing the self-consistent evolution of the solar plasma. Here we present a global magnetohydrodynamical (MHD) simulation of solar convection extending over more than a millennium that produces large-scale solar-like axisymmetric magnetic fields undergoing polarity reversals on a decadal time scale. Most importantly, we find that the convective heat flux in this simulation varies in phase with the strength of the cyclic magnetic field, which is consistent with the enhanced value of TSI observed at solar maxima. The impact of the observed modulation on the amplitude of TSI fluctuations remains yet to be understood, since the domain of our simulation stops at 0.96 R, which is slightly below the photosphere. Nevertheless, the fact that we observe a positive correlation between convective energy transport and magnetic activity suggests that global structural changes may indeed affect the amplitude of long-term TSI variations. Knowing whether or not such a global thermal modulation operates independently from the mechanism responsible for the emergence of sunspots at the solar surface is therefore important for assessing possible connections between periods of quiet surface magnetism and the Earth's climate, such as the postulated relationship between the Maunder Minimum and the Little Ice Age.

Controllable gaussian-qubit interface for extremal quantum state engineering.

PubMed

Adesso, Gerardo; Campbell, Steve; Illuminati, Fabrizio; Paternostro, Mauro

2010-06-18

We study state engineering through bilinear interactions between two remote qubits and two-mode gaussian light fields. The attainable two-qubit states span the entire physically allowed region in the entanglement-versus-global-purity plane. Two-mode gaussian states with maximal entanglement at fixed global and marginal entropies produce maximally entangled two-qubit states in the corresponding entropic diagram. We show that a small set of parameters characterizing extremally entangled two-mode gaussian states is sufficient to control the engineering of extremally entangled two-qubit states, which can be realized in realistic matter-light scenarios.

Spatial Variations of Poloidal and Toroidal Mode Field Line Resonances Observed by MMS

NASA Astrophysics Data System (ADS)

Le, G.; Chi, P. J.; Strangeway, R. J.; Russell, C. T.; Slavin, J. A.; Anderson, B. J.; Kepko, L.; Nakamura, R.; Plaschke, F.; Torbert, R. B.

2017-12-01

Field line resonances (FLRs) are magnetosphere's responses to solar wind forcing and internal instabilities generated by solar wind-magnetospheric interactions. They are standing waves along the Earth's magnetic field lines oscillating in either poloidal or toroidal modes. The two types of waves have their unique frequency characteristics. The eigenfrequency of FLRs is determined by the length of the field line and the plasma density, and thus gradually changes with L. For toroidal mode oscillations with magnetic field perturbations in the azimuthal direction, ideal MHD predicts that each field line oscillates independently with its own eigenfrequency. For poloidal mode waves with field lines oscillating radially, their frequency cannot change with L easily as L shells need to oscillate in sync to avoid efficient damping due to phase mixing. Observations, mainly during quiet times, indeed show that poloidal mode waves often exhibit nearly constant frequency across L shells. Our recent observations, on the other hand, reveal a clear L-dependent frequency trend for a long lasting storm-time poloidal wave event, indicating the wave can maintain its power with changing frequencies for an extended period [Le et al., 2017]. The spatial variation of the frequency shows discrete spatial structures. The frequency remains constant within each discrete structure that spans about 1 REalong L, and changes discretely. We present a follow-up study to investigate spatial variations of wave frequencies using the Wigner-Ville distribution. We examine both poloidal and toroidal waves under different geomagnetic conditions using multipoint observations from MMS, and compare their frequency and occurrence characteristics for insights into their generation mechanisms. Reference: Le, G., et al. (2017), Global observations of magnetospheric high-m poloidal waves during the 22 June 2015 magnetic storm, Geophys. Res. Lett., 44, 3456-3464, doi:10.1002/2017GL073048.

Local time asymmetries and toroidal field line resonances: Global magnetospheric modeling in SWMF

NASA Astrophysics Data System (ADS)

Ellington, S. M.; Moldwin, M. B.; Liemohn, M. W.

2016-03-01

We present evidence of resonant wave-wave coupling via toroidal field line resonance (FLR) signatures in the Space Weather Modeling Framework's (SWMF) global, terrestrial magnetospheric model in one simulation driven by a synthetic upstream solar wind with embedded broadband dynamic pressure fluctuations. Using in situ, stationary point measurements of the radial electric field along the 1500 LT meridian, we show that SWMF reproduces a multiharmonic, continuous distribution of FLRs exemplified by 180° phase reversals and amplitude peaks across the resonant L shells. By linearly increasing the amplitude of the dynamic pressure fluctuations in time, we observe a commensurate increase in the amplitude of the radial electric and azimuthal magnetic field fluctuations, which is consistent with the solar wind driver being the dominant source of the fast mode energy. While we find no discernible local time changes in the FLR frequencies despite large-scale, monotonic variations in the dayside equatorial mass density, in selectively sampling resonant points and examining spectral resonance widths, we observe significant radial, harmonic, and time-dependent local time asymmetries in the radial electric field amplitudes. A weak but persistent local time asymmetry exists in measures of the estimated coupling efficiency between the fast mode and toroidal wave fields, which exhibits a radial dependence consistent with the coupling strength examined by Mann et al. (1999) and Zhu and Kivelson (1988). We discuss internal structural mechanisms and additional external energy sources that may account for these asymmetries as we find that local time variations in the strength of the compressional driver are not the predominant source of the FLR amplitude asymmetries. These include resonant mode coupling of observed Kelvin-Helmholtz surface wave generated Pc5 band ultralow frequency pulsations, local time differences in local ionospheric dampening rates, and variations in azimuthal mode number, which may impact the partitioning of spectral energy between the toroidal and poloidal wave modes.

Non-linear tides in a homogeneous rotating planet or star: global modes and elliptical instability

NASA Astrophysics Data System (ADS)

Barker, Adrian J.; Braviner, Harry J.; Ogilvie, Gordon I.

2016-06-01

We revisit the global modes and instabilities of homogeneous rotating ellipsoidal fluid masses, which are the simplest global models of rotationally and tidally deformed gaseous planets or stars. The tidal flow in a short-period planet may be unstable to the elliptical instability, a hydrodynamic instability that can drive tidal evolution. We perform a global (and local WKB) analysis to study this instability using the elegant formalism of Lebovitz & Lifschitz. We survey the parameter space of global instabilities with harmonic orders ℓ ≤ 5, for planets with spins that are purely aligned (prograde) or anti-aligned (retrograde) with their orbits. In general, the instability has a much larger growth rate if the planetary spin and orbit are anti-aligned rather than aligned. We have identified a violent instability for anti-aligned spins outside of the usual frequency range for the elliptical instability (when n/Ω ≲ -1, where n and Ω are the orbital and spin angular frequencies, respectively) if the tidal amplitude is sufficiently large. We also explore the instability in a rigid ellipsoidal container, which is found to be quantitatively similar to that with a realistic free surface. Finally, we study the effect of rotation and tidal deformation on mode frequencies. We find that larger rotation rates and larger tidal deformations both decrease the frequencies of the prograde sectoral surface gravity modes. This increases the prospect of their tidal excitation, potentially enhancing the tidal response over expectations from linear theory. In a companion paper, we use our results to interpret global simulations of the elliptical instability.

TEC Longitude Difference Using GIMS and the IRI Model

NASA Astrophysics Data System (ADS)

Natali, Maria Paula; Meza, Amalia Margarita; Mendoza, Gastón

2016-07-01

The main geomagnetic field declination has a global distribution with positive and negative values showing maximum east-west differences over North America and Oceania and minimum differences over America and Asia. Several authors study one or more of these regions using TEC data derived from GNSS observations to describe variations in TEC. They reported a pronounced longitudinal variation respect to zero magnetic declination. One of the important factors that cause the longitude difference at mid-latitude is a combined effect of the longitude variations of magnetic declination and the variations of the zonal thermospheric winds with local time. We propose to study this effect using Global Ionospheric Maps (GIMs) and the respective TEC values generated from the International Reference Ionospheric (IRI) model, during a solar cycle, applying Principal Component Analysis (PCA). Our works is focused over different local times and regions at mid-latitude. PCA involves a mathematical procedure that transforms a number of correlated variables into a number of uncorrelated variables using the data itself. The spatial structure of the ionosphere variability and its temporal evolution, together are called modes, and there are ordered according to their percentage of the variability of data from highest to lowest. In this analysis the first mode has more than the 90 % of the variability, representing the nominal behavior of the ionosphere, and the second and third modes are the more important for our analysis, because they show the strong longitudinal variation in the different regions using either GIMs or the IRI model.

Mode transition of a Hall thruster discharge plasma

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hara, Kentaro, E-mail: kenhara@umich.edu; Sekerak, Michael J., E-mail: msekerak@umich.edu; Boyd, Iain D.

2014-05-28

A Hall thruster is a cross-field plasma device used for spacecraft propulsion. An important unresolved issue in the development of Hall thrusters concerns the effect of discharge oscillations in the range of 10–30 kHz on their performance. The use of a high speed Langmuir probe system and ultra-fast imaging of the discharge plasma of a Hall thruster suggests that the discharge oscillation mode, often called the breathing mode, is strongly correlated to an axial global ionization mode. Stabilization of the global oscillation mode is achieved as the magnetic field is increased and azimuthally rotating spokes are observed. A hybrid-direct kinetic simulationmore » that takes into account the transport of electronically excited atoms is used to model the discharge plasma of a Hall thruster. The predicted mode transition agrees with experiments in terms of the mean discharge current, the amplitude of discharge current oscillation, and the breathing mode frequency. It is observed that the stabilization of the global oscillation mode is associated with reduced electron transport that suppresses the ionization process inside the channel. As the Joule heating balances the other loss terms including the effects of wall loss and inelastic collisions, the ionization oscillation is damped, and the discharge oscillation stabilizes. A wide range of the stable operation is supported by the formation of a space charge saturated sheath that stabilizes the electron axial drift and balances the Joule heating as the magnetic field increases. Finally, it is indicated from the numerical results that there is a strong correlation between the emitted light intensity and the discharge current.« less

The use of experimental structures to model protein dynamics.

PubMed

Katebi, Ataur R; Sankar, Kannan; Jia, Kejue; Jernigan, Robert L

2015-01-01

The number of solved protein structures submitted in the Protein Data Bank (PDB) has increased dramatically in recent years. For some specific proteins, this number is very high-for example, there are over 550 solved structures for HIV-1 protease, one protein that is essential for the life cycle of human immunodeficiency virus (HIV) which causes acquired immunodeficiency syndrome (AIDS) in humans. The large number of structures for the same protein and its variants include a sample of different conformational states of the protein. A rich set of structures solved experimentally for the same protein has information buried within the dataset that can explain the functional dynamics and structural mechanism of the protein. To extract the dynamics information and functional mechanism from the experimental structures, this chapter focuses on two methods-Principal Component Analysis (PCA) and Elastic Network Models (ENM). PCA is a widely used statistical dimensionality reduction technique to classify and visualize high-dimensional data. On the other hand, ENMs are well-established simple biophysical method for modeling the functionally important global motions of proteins. This chapter covers the basics of these two. Moreover, an improved ENM version that utilizes the variations found within a given set of structures for a protein is described. As a practical example, we have extracted the functional dynamics and mechanism of HIV-1 protease dimeric structure by using a set of 329 PDB structures of this protein. We have described, step by step, how to select a set of protein structures, how to extract the needed information from the PDB files for PCA, how to extract the dynamics information using PCA, how to calculate ENM modes, how to measure the congruency between the dynamics computed from the principal components (PCs) and the ENM modes, and how to compute entropies using the PCs. We provide the computer programs or references to software tools to accomplish each step and show how to use these programs and tools. We also include computer programs to generate movies based on PCs and ENM modes and describe how to visualize them.

The Use of Experimental Structures to Model Protein Dynamics

PubMed Central

Katebi, Ataur R.; Sankar, Kannan; Jia, Kejue; Jernigan, Robert L.

2014-01-01

Summary The number of solved protein structures submitted in the Protein Data Bank (PDB) has increased dramatically in recent years. For some specific proteins, this number is very high – for example, there are over 550 solved structures for HIV-1 protease, one protein that is essential for the life cycle of human immunodeficiency virus (HIV) which causes acquired immunodeficiency syndrome (AIDS) in humans. The large number of structures for the same protein and its variants include a sample of different conformational states of the protein. A rich set of structures solved experimentally for the same protein has information buried within the dataset that can explain the functional dynamics and structural mechanism of the protein. To extract the dynamics information and functional mechanism from the experimental structures, this chapter focuses on two methods – Principal Component Analysis (PCA) and Elastic Network Models (ENM). PCA is a widely used statistical dimensionality reduction technique to classify and visualize high-dimensional data. On the other hand, ENMs are well-established simple biophysical method for modeling the functionally important global motions of proteins. This chapter covers the basics of these two. Moreover, an improved ENM version that utilizes the variations found within a given set of structures for a protein is described. As a practical example, we have extracted the functional dynamics and mechanism of HIV-1 protease dimeric structure by using a set of 329 PDB structures of this protein. We have described, step by step, how to select a set of protein structures, how to extract the needed information from the PDB files for PCA, how to extract the dynamics information using PCA, how to calculate ENM modes, how to measure the congruency between the dynamics computed from the principal components (PCs) and the ENM modes, and how to compute entropies using the PCs. We provide the computer programs or references to software tools to accomplish each step and show how to use these programs and tools. We also include computer programs to generate movies based on PCs and ENM modes and describe how to visualize them. PMID:25330965

Bayesian operational modal analysis with asynchronous data, part I: Most probable value

NASA Astrophysics Data System (ADS)

Zhu, Yi-Chen; Au, Siu-Kui

2018-01-01

In vibration tests, multiple sensors are used to obtain detailed mode shape information about the tested structure. Time synchronisation among data channels is required in conventional modal identification approaches. Modal identification can be more flexibly conducted if this is not required. Motivated by the potential gain in feasibility and economy, this work proposes a Bayesian frequency domain method for modal identification using asynchronous 'output-only' ambient data, i.e. 'operational modal analysis'. It provides a rigorous means for identifying the global mode shape taking into account the quality of the measured data and their asynchronous nature. This paper (Part I) proposes an efficient algorithm for determining the most probable values of modal properties. The method is validated using synthetic and laboratory data. The companion paper (Part II) investigates identification uncertainty and challenges in applications to field vibration data.

H-Mode Behavior Induced by Modulated Toroidal Current on HT-7 and HT-6M Tokamak

NASA Astrophysics Data System (ADS)

Mao, J. S.; Luo, J. R.; Xu, Y. H.; Zhao, J. Y.; Zhang, X. M.; Li, J. G.; Zhang, X. M.; Gao, X.; Li, Y. D.; Jie, Y. X.; Wu, Z. W.; Hu, L. Q.; Liu, S. X.; Zhang, X. D.; Bao, Y.; Yang, K.; Wang, G. X.; Chen, L.; Shi, Y. J.; Qin, P. J.; Gu, X. M.; Cui, N. Z.; Fan, H. Y.; Chen, Y. F.; Xia, C. Y.; Ruan, H. L.; Tong, X. D.; Phillips, P. E.

2001-10-01

An improved Ohmic confinement phase (similar to H-mode) has been observed during Modulating Toroidal Current on the Hefei Tokamak-6M (HT-6M) and Hefei super-conducting Tokamak-7 (HT-7). This improved plasma confinement phase is characterized by: (a) an increase in ne and T_e(0); (b) reduced H_α radiation from the edge; (c) steeper density and temperature profiles at the edge; (d) a more negative radial electric field inside the limiter; (e) a deeper electrostatic potential well at the edge; (f) reduced magnetic fluctuations at the edge; (g) MHD suppressing; (h) and by an increase in global energy confinement time, τ _e, by 27%-45%. The well-like structure of the radial electric field E_r, appears at an L-H like transition.

Normal modes of the world's oceans: A numerical investigation using Proudman functions

NASA Technical Reports Server (NTRS)

Sanchez, Braulio V.; Morrow, Dennis

1993-01-01

The numerical modeling of the normal modes of the global oceans is addressed. The results of such modeling could be expected to serve as a guide in the analysis of observations and measurements intended to detect these modes. The numerical computation of normal modes of the global oceans is a field in which several investigations have obtained results during the past 15 years. The results seem to be model-dependent to an unsatisfactory extent. Some modeling areas, such as higher resolution of the bathymetry, inclusion of self-attraction and loading, the role of the Arctic Ocean, and systematic testing by means of diagnostic models are addressed. The results show that the present state of the art is such that a final solution to the normal mode problem still lies in the future. The numerical experiments show where some of the difficulties are and give some insight as to how to proceed in the future.

Calibration results for the GEOS-3 altimeter

NASA Technical Reports Server (NTRS)

Martin, C. F.; Butler, M. L.

1977-01-01

Data from the GEOS-3 altimeter were analyzed, for both the intensive and global modes, to determine the altitude bias levels for each mode and to verify the accuracy of the time tags which have been applied to the data. The best estimates of the biases are -5.30 + or - .2 m (intensive mode) and -3.55 m + or - .4 m (global mode). These values include the approximately 1.6 m offset of the altimeter antenna focal point from the GEOS-3 spacecraft center-of-mass. The negative signs indicate that the measured altitudes are too short. The data is corrected by subtracting the above bias numbers for the respective modes. Timing corrections which should be applied to the altimeter data were calculated theoretically, and subsequently confirmed through crossover analysis for passes 6-8 revolutions apart. The time tag correction that should be applied consists of -20.8 msec + 1 interpulse period (10.240512 msec).

Global simulation of edge pedestal micro-instabilities

NASA Astrophysics Data System (ADS)

Wan, Weigang; Parker, Scott; Chen, Yang

2011-10-01

We study micro turbulence of the tokamak edge pedestal with global gyrokinetic particle simulations. The simulation code GEM is an electromagnetic δf code. Two sets of DIII-D experimental profiles, shot #131997 and shot #136051 are used. The dominant instabilities appear to be two kinds of modes both propagating in the electron diamagnetic direction, with comparable linear growth rates. The low n mode is at the Alfven frequency range and driven by density and ion temperature gradients. The high n mode is driven by electron temperature gradient and has a low real frequency. A β scan shows that the low n mode is electromagnetic. Frequency analysis shows that the high n mode is sometimes mixed with an ion instability. Experimental radial electric field is applied and its effects studied. We will also show some preliminary nonlinear results. We thank R. Groebner, P. Snyder and Y. Zheng for providing experimental profiles and helpful discussions.

Energetics of global ocean tides from Geosat altimetry

NASA Technical Reports Server (NTRS)

Cartwright, David E.; Ray, Richard D.

1991-01-01

The present paper focuses on resonance and energetics of the daily tides, especially in the southern ocean, the distribution of gravitational power input of daily and half-daily tides, and comparison with other estimates of global dissipation rates. The present global tidal maps, derived from Geosat altimetry, compare favorably with ground truth data at about the same rms level as the models of Schwiderski (1983), and are slightly better in lunar than in solar tides. Diurnal admittances clearly show Kelvin wave structure in the southern ocean and confirm the resonant mode of Platzman (1984) at 28.5 + or - 0.1 hr with an apparent Q of about 4. Driving energy is found to enter dominantly in the North Pacific for the daily tides and is strongly peaked in the tropical oceans for the half-daily tides. Global rates of working on all major tide constituents except S2 agree well with independent results from analyses of gravity through satellite tracking. Comparison at S2 is improved by allowing for the air tide in gravitational results but suggests deficiencies in all solar tide models.

Determination of the Global-Average Charge Moment of a Lightning Flash Using Schumann Resonances and the LIS/OTD Lightning Data

NASA Astrophysics Data System (ADS)

Boldi, Robert; Williams, Earle; Guha, Anirban

2018-01-01

In this paper, we use (1) the 20 year record of Schumann resonance (SR) signals measured at West Greenwich Rhode Island, USA, (2) the 19 year Lightning Imaging Sensor (LIS)/Optical Transient Detector (OTD) lightning data, and (3) the normal mode equations for a uniform cavity model to quantify the relationship between the observed Schumann resonance modal intensity and the global-average vertical charge moment change M (C km) per lightning flash. This work, by integrating SR measurements with satellite-based optical measurements of global flash rate, accomplishes this quantification for the first time. To do this, we first fit the intensity spectra of the observed SR signals to an eight-mode, three parameter per mode, (symmetric) Lorentzian line shape model. Next, using the LIS/OTD lightning data and the normal mode equations for a uniform cavity model, we computed the expected climatological-daily-average intensity spectra. We then regressed the observed modal intensity values against the expected modal intensity values to find the best fit value of the global-average vertical charge moment change of a lightning flash (M) to be 41 C km per flash with a 99% confidence interval of ±3.9 C km per flash, independent of mode. Mode independence argues that the model adequately captured the modal intensity, the most important fit parameter herein considered. We also tested this relationship for the presence of residual modal intensity at zero lightning flashes per second and found no evidence that modal intensity is significantly different than zero at zero lightning flashes per second, setting an upper limit to the amount of nonlightning contributions to the observed modal intensity.

Geometric stabilization of the electrostatic ion-temperature-gradient driven instability. I. Nearly axisymmetric systems

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zocco, A.; Plunk, G. G.; Xanthopoulos, P.

The effects of a non-axisymmetric (3D) equilibrium magnetic field on the linear ion-temperature-gradient (ITG) driven mode are investigated. We consider the strongly driven, toroidal branch of the instability in a global (on the magnetic surface) setting. Previous studies have focused on particular features of non-axisymmetric systems, such as strong local shear or magnetic ripple, that introduce inhomogeneity in the coordinate along the magnetic field. In contrast, here we include non-axisymmetry explicitly via the dependence of the magnetic drift on the field line label α, i.e., across the magnetic field, but within the magnetic flux surface. We consider the limit wheremore » this variation occurs on a scale much larger than that of the ITG mode, and also the case where these scales are similar. Close to axisymmetry, we find that an averaging effect of the magnetic drift on the flux surface causes global (on the surface) stabilization, as compared to the most unstable local mode. In the absence of scale separation, we find destabilization is also possible, but only if a particular resonance occurs between the magnetic drift and the mode, and finite Larmor radius effects are neglected. We discuss the relative importance of surface global effects and known radially global effects.« less

The Influence of Low-carbon Economy on Global Trade Pattern

NASA Astrophysics Data System (ADS)

Xiao-jing, Guo

Since global warming has seriously endangered the living environment of human being and their health and safety, the development of low-carbon economy has become an irreversible global trend. Under the background of economic globalization, low-carbon economy will surely exert a significant impact on global trade pattern. Countries are paying more and more attention to the green trade. The emission permits trade of carbon between the developed countries and the developing countries has become more mature than ever. The carbon tariff caused by the distribution of the "big cake" will make the low-cost advantage in developing countries cease to exist, which will, in turn, affect the foreign trade, economic development, employment and people's living in developing countries. Therefore, under the background of this trend, we should perfect the relevant laws and regulations on trade and environment as soon as possible, optimize trade structure, promote greatly the development of service trade, transform thoroughly the mode of development in foreign trade, take advantage of the international carbon trading market by increasing the added value of export products resulted from technological innovation to achieve mutual benefit and win-win results and promote common development.

Predictive modeling of pedestal structure in KSTAR using EPED model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Han, Hyunsun; Kim, J. Y.; Kwon, Ohjin

2013-10-15

A predictive calculation is given for the structure of edge pedestal in the H-mode plasma of the KSTAR (Korea Superconducting Tokamak Advanced Research) device using the EPED model. Particularly, the dependence of pedestal width and height on various plasma parameters is studied in detail. The two codes, ELITE and HELENA, are utilized for the stability analysis of the peeling-ballooning and kinetic ballooning modes, respectively. Summarizing the main results, the pedestal slope and height have a strong dependence on plasma current, rapidly increasing with it, while the pedestal width is almost independent of it. The plasma density or collisionality gives initiallymore » a mild stabilization, increasing the pedestal slope and height, but above some threshold value its effect turns to a destabilization, reducing the pedestal width and height. Among several plasma shape parameters, the triangularity gives the most dominant effect, rapidly increasing the pedestal width and height, while the effect of elongation and squareness appears to be relatively weak. Implication of these edge results, particularly in relation to the global plasma performance, is discussed.« less

Statistical downscaling forecast of Chinese winter temperature based on the autumn SST anomalies

NASA Astrophysics Data System (ADS)

Lu, J.

2017-12-01

This study investigates the impacts of the autumn sea surface temperature anomalies (SSTA) on interannual variations of Chinese winter temperature, and discusses the potential predictability of December-January-February (DJF) 2-m air temperature anomalies (TSA) over China based on the intimate linkage between the DJF TSA and autumn SSTA. According to the Empirical Orthogonal Function (EOF) analysis, three leading EOF modes jointly account for 80% of the total TSA variances and are characterized by a homogeneous spatial pattern, a north-south seesaw and a cross structure. The first three EOFs exhibit a stable feature revealed by cross-validation, suggesting the potential predictability of the DJF TSA. The EOF1 mode is influenced by changes in the intensities of the Siberian High (SH), East Asian winter monsoon (EAWM) and East Asian Trough related to an Eurasian pattern teleconnection, which can be tracked back to September-October-November (SON) SSTA associated with two SSTA tripole patterns in the North Pacific and North Atlantic, a dipole mode in the Indian Ocean and an ENSO-like mode in the equatorial and subtropical Pacific. However, the Arctic Oscillation plays an important role in the second mode. The teleconnection connecting the atmospheric circulation anomalies in two hemispheres indicates that the configuration of global SON SSTA induces the two annular modes and causes a TSA oscillation between the northern and southern parts of China. The third mode is related to the westward shift of the SH and western pathway EAWM, which are attributed to two dipole modes in the North Pacific and South Pacific, Atlantic Multidecadal Oscillation and Indian Ocean Basin Mode. Therefore a physically-based statistical model is established based on autumn SSTA indices. Cross-validation suggests that this statistical downscaling forecast model shows a good performance in predicting the DJF TSA.

Determination of functional collective motions in a protein at atomic resolution using coherent neutron scattering

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hong, Liang; Jain, Nitin; Cheng, Xiaolin

Protein function often depends on global, collective internal motions. However, the simultaneous quantitative experimental determination of the forms, amplitudes, and time scales of these motions has remained elusive. We demonstrate that a complete description of these large-scale dynamic modes can be obtained using coherent neutron-scattering experiments on perdeuterated samples. With this approach, a microscopic relationship between the structure, dynamics, and function in a protein, cytochrome P450cam, is established. The approach developed here should be of general applicability to protein systems.

Determination of functional collective motions in a protein at atomic resolution using coherent neutron scattering

DOE PAGES

Hong, Liang; Jain, Nitin; Cheng, Xiaolin; ...

2016-10-14

Protein function often depends on global, collective internal motions. However, the simultaneous quantitative experimental determination of the forms, amplitudes, and time scales of these motions has remained elusive. We demonstrate that a complete description of these large-scale dynamic modes can be obtained using coherent neutron-scattering experiments on perdeuterated samples. With this approach, a microscopic relationship between the structure, dynamics, and function in a protein, cytochrome P450cam, is established. The approach developed here should be of general applicability to protein systems.

Vibrational spectroscopy of (SO4(2-)).(H2O)n clusters, n=1-5: harmonic and anharmonic calculations and experiment.

PubMed

Miller, Yifat; Chaban, Galina M; Zhou, Jia; Asmis, Knut R; Neumark, Daniel M; Gerber, R Benny

2007-09-07

The vibrational spectroscopy of (SO4(2-)).(H2O)n is studied by theoretical calculations for n=1-5, and the results are compared with experiments for n=3-5. The calculations use both ab initio MP2 and DFT/B3LYP potential energy surfaces. Both harmonic and anharmonic calculations are reported, the latter with the CC-VSCF method. The main findings are the following: (1) With one exception (H2O bending mode), the anharmonicity of the observed transitions, all in the experimental window of 540-1850 cm(-1), is negligible. The computed anharmonic coupling suggests that intramolecular vibrational redistribution does not play any role for the observed linewidths. (2) Comparison with experiment at the harmonic level of computed fundamental frequencies indicates that MP2 is significantly more accurate than DFT/B3LYP for these systems. (3) Strong anharmonic effects are, however, calculated for numerous transitions of these systems, which are outside the present observation window. These include fundamentals as well as combination modes. (4) Combination modes for the n=1 and n=2 clusters are computed. Several relatively strong combination transitions are predicted. These show strong anharmonic effects. (5) An interesting effect of the zero point energy (ZPE) on structure is found for (SO4(2-)).(H2O)(5): The global minimum of the potential energy corresponds to a C(s) structure, but with incorporation of ZPE the lowest energy structure is C2v, in accordance with experiment. (6) No stable structures were found for (OH-).(HSO4-).(H2O)n, for n

Vibrational spectroscopy of (SO42-).(H2O)n clusters, n=1-5: Harmonic and anharmonic calculations and experiment

NASA Astrophysics Data System (ADS)

Miller, Yifat; Chaban, Galina M.; Zhou, Jia; Asmis, Knut R.; Neumark, Daniel M.; Benny Gerber, R.

2007-09-01

The vibrational spectroscopy of (SO42-)•(H2O)n is studied by theoretical calculations for n =1-5, and the results are compared with experiments for n =3-5. The calculations use both ab initio MP2 and DFT/B3LYP potential energy surfaces. Both harmonic and anharmonic calculations are reported, the latter with the CC-VSCF method. The main findings are the following: (1) With one exception (H2O bending mode), the anharmonicity of the observed transitions, all in the experimental window of 540-1850cm-1, is negligible. The computed anharmonic coupling suggests that intramolecular vibrational redistribution does not play any role for the observed linewidths. (2) Comparison with experiment at the harmonic level of computed fundamental frequencies indicates that MP2 is significantly more accurate than DFT/B3LYP for these systems. (3) Strong anharmonic effects are, however, calculated for numerous transitions of these systems, which are outside the present observation window. These include fundamentals as well as combination modes. (4) Combination modes for the n=1 and n =2 clusters are computed. Several relatively strong combination transitions are predicted. These show strong anharmonic effects. (5) An interesting effect of the zero point energy (ZPE) on structure is found for (SO42-)•(H2O)5: The global minimum of the potential energy corresponds to a Cs structure, but with incorporation of ZPE the lowest energy structure is C2v, in accordance with experiment. (6) No stable structures were found for (OH-)•(HSO4-)•(H2O)n, for n ⩽5.

Improvements in mode-based waveform modeling and application to Eurasian velocity structure

NASA Astrophysics Data System (ADS)

Panning, M. P.; Marone, F.; Kim, A.; Capdeville, Y.; Cupillard, P.; Gung, Y.; Romanowicz, B.

2006-12-01

We introduce several recent improvements to mode-based 3D and asymptotic waveform modeling and examine how to integrate them with numerical approaches for an improved model of upper-mantle structure under eastern Eurasia. The first step in our approach is to create a large-scale starting model including shear anisotropy using Nonlinear Asymptotic Coupling Theory (NACT; Li and Romanowicz, 1995), which models the 2D sensitivity of the waveform to the great-circle path between source and receiver. We have recently improved this approach by implementing new crustal corrections which include a non-linear correction for the difference between the average structure of several large regions from the global model with further linear corrections to account for the local structure along the path between source and receiver (Marone and Romanowicz, 2006; Panning and Romanowicz, 2006). This model is further refined using a 3D implementation of Born scattering (Capdeville, 2005). We have made several recent improvements to this method, in particular introducing the ability to represent perturbations to discontinuities. While the approach treats all sensitivity as linear perturbations to the waveform, we have also experimented with a non-linear modification analogous to that used in the development of NACT. This allows us to treat large accumulated phase delays determined from a path-average approximation non-linearly, while still using the full 3D sensitivity of the Born approximation. Further refinement of shallow regions of the model is obtained using broadband forward finite-difference waveform modeling. We are also integrating a regional Spectral Element Method code into our tomographic modeling, allowing us to move beyond many assumptions inherent in the analytic mode-based approaches, while still taking advantage of their computational efficiency. Illustrations of the effects of these increasingly sophisticated steps will be presented.

Effect of Vertical Concentration Gradient on Globally Planar Detonation with Detailed Reaction Mechanism

NASA Astrophysics Data System (ADS)

Song, Qingguana; Wang, Cheng; Han, Yong; Gao, Dayuan; Duan, Yingliang

2017-06-01

Since detonation often initiates and propagates in the non-homogeneous mixtures, investigating its behavior in non-uniform mixtures is significant not only for the industrial explosion in the leakage combustible gas, but also for the experimental investigations with a vertical concentration gradient caused by the difference in the molecular weight of gas mixture. Objective of this work is to show the detonation behavior in the mixture with different concentration gradients with detailed chemical reaction mechanism. A globally planar detonation in H2-O2 system is simulated by a high-resolution code based on the fifth-order weighted essentially non-oscillatory (WENO) scheme in spatial discretization and the third-order Additive Runge-Kutta schemes in time discretization. The different shocked combustion modes appear in the rich-fuel and poor-fuel layers due to the concentration gradient effect. Globally, for the cases with the lower gradient detonation can be sustained in a way of the alternation of the multi-heads mode and single-head mode, whereas for the cases with the higher gradient detonation propagates with a single-head mode. Institute of Chemical Materials, CAEP.

Full Three-Dimensional Tomography Experiments in the Western Pacific Region

NASA Astrophysics Data System (ADS)

Zhao, L.; Chen, L.; Jordan, T. H.

2001-12-01

Two decades of seismic tomography studies have yielded earth models with three-dimensional (3-D) velocity heterogeneities in the mantle on both global and regional scales. With the continuing improvements in inversion techniques, station coverage and computational facilities, seismic tomography has reached a stage at which higher resolution to the structure can only be achieved reliably by employing accurate descriptions between observables and structural parameters, especially in the upper mantle. With this in mind, we have conducted a tomography experiment for the mantle structure beneath the Western Pacific with a full 3-D approach: imaging the 3-D structure using true 3-D Fréchet kernels. In our experiment, we use nearly 20,000 delay times measured at eight discrete frequencies between 10mHz and 45mHz from three-component regional {S} waves, including its multiple reflections from the surface and the CMB. The 3-D Fréchet kernels for these delay times are computed by a normal-mode approach (Zhao, Jordan & Chapman 2000) in which coupling between each pair of modes is accounted for with the exception of cross coupling between spheroidal and toroidal modes. The algorithm is implemented with MPI on the 192-node (and expanding) dual-processor Linux-PC cluster at the University of Southern California. The 3-D radially anisotropic shear-speed model is obtained through a Gaussian-Bayesian inversion. A full description of features in our model will be given in a separate presentation (Chen, Zhao & Jordan, this meeting). Here we discuss in detail the issues related to the calculation of a large number of coupled-mode 3-D kernels for the frequency-dependent delay times and their inversion. We also examine the efficacy of this full 3-D approach in regional high-resolution tomography studies by comparing the results with those in our previous work in which the 3-D structure was obtained by inverting the same delay-time measurements but using computationally more efficient 2-D Fréchet kernels approximated from 3-D by an asymptotic stationary-phase integration across the great-circle plane.

Posttest analysis of the 1:6-scale reinforced concrete containment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pfeiffer, P.A.; Kennedy, J.M.; Marchertas, A.H.

A prediction of the response of the Sandia National Laboratories 1:6- scale reinforced concrete containment model test was made by Argonne National Laboratory. ANL along with nine other organizations performed a detailed nonlinear response analysis of the 1:6-scale model containment subjected to overpressurization in the fall of 1986. The two-dimensional code TEMP-STRESS and the three-dimensional NEPTUNE code were utilized (1) to predict the global response of the structure, (2) to identify global failure sites and the corresponding failure pressures and (3) to identify some local failure sites and pressure levels. A series of axisymmetric models was studied with the two-dimensionalmore » computer program TEMP-STRESS. The comparison of these pretest computations with test data from the containment model has provided a test for the capability of the respective finite element codes to predict global failure modes, and hence serves as a validation of these codes. Only the two-dimensional analyses will be discussed in this paper. 3 refs., 10 figs.« less

Vertical coherence in mantle heterogeneity from global seismic data

NASA Astrophysics Data System (ADS)

Boschi, L.; Becker, T. W.

2011-10-01

The vertical coherence of mantle structure is of importance for a range of dynamic issues including convective mass transport and the geochemical evolution of Earth. Here, we use seismic data to infer the most likely depth ranges of strong, global changes in the horizontal pattern of mantle heterogeneity. We apply our algorithm to a comprehensive set of measurements, including various shear- and compressional-wave delay times and Love- and Rayleigh-wave fundamental mode and overtone dispersion, so that tomography resolution is as high as possible at all mantle depths. We find that vertical coherence is minimum at ∼100 km and ∼800 km depths, corresponding to the base of the lithosphere and the transition between upper and lower mantle, respectively. The D″ layer is visible, but not as prominent as the shallower features. The rest of the lower mantle is, essentially, vertically coherent. These findings are consistent with slab stagnation at depths around, and perhaps below, the 660-km phase transition, and inconsistent with global, chemically distinct, mid-mantle layering.

Global meteorological data facility for real-time field experiments support and guidance

NASA Technical Reports Server (NTRS)

Shipham, Mark C.; Shipley, Scott T.; Trepte, Charles R.

1988-01-01

A Global Meteorological Data Facility (GMDF) has been constructed to provide economical real-time meteorological support to atmospheric field experiments. After collection and analysis of meteorological data sets at a central station, tailored meteorological products are transmitted to experiment field sites using conventional ground link or satellite communication techniques. The GMDF supported the Global Tropospheric Experiment Amazon Boundary Layer Experiment (GTE-ABLE II) based in Manaus, Brazil, during July and August 1985; an arctic airborne lidar survey mission for the Polar Stratospheric Clouds (PSC) experiment during January 1986; and the Genesis of Atlantic Lows Experiment (GALE) during January, February and March 1986. GMDF structure is similar to the UNIDATA concept, including meteorological data from the Zephyr Weather Transmission Service, a mode AAA GOES downlink, and dedicated processors for image manipulation, transmission and display. The GMDF improved field experiment operations in general, with the greatest benefits arising from the ability to communicate with field personnel in real time.

Simplified Models for the Study of Postbuckled Hat-Stiffened Composite Panels

NASA Technical Reports Server (NTRS)

Vescovini, Riccardo; Davila, Carlos G.; Bisagni, Chiara

2012-01-01

The postbuckling response and failure of multistringer stiffened panels is analyzed using models with three levels of approximation. The first model uses a relatively coarse mesh to capture the global postbuckling response of a five-stringer panel. The second model can predict the nonlinear response as well as the debonding and crippling failure mechanisms in a single stringer compression specimen (SSCS). The third model consists of a simplified version of the SSCS that is designed to minimize the computational effort. The simplified model is well-suited to perform sensitivity analyses for studying the phenomena that lead to structural collapse. In particular, the simplified model is used to obtain a deeper understanding of the role played by geometric and material modeling parameters such as mesh size, inter-laminar strength, fracture toughness, and fracture mode mixity. Finally, a global/local damage analysis method is proposed in which a detailed local model is used to scan the global model to identify the locations that are most critical for damage tolerance.

Global model for the lithospheric strength and effective elastic thickness

NASA Astrophysics Data System (ADS)

Tesauro, Magdala; Kaban, Mikhail K.; Cloetingh, Sierd A. P. L.

2013-08-01

Global distribution of the strength and effective elastic thickness (Te) of the lithosphere are estimated using physical parameters from recent crustal and lithospheric models. For the Te estimation we apply a new approach, which provides a possibility to take into account variations of Young modulus (E) within the lithosphere. In view of the large uncertainties affecting strength estimates, we evaluate global strength and Te distributions for possible end-member 'hard' (HRM) and a 'soft' (SRM) rheology models of the continental crust. Temperature within the lithosphere has been estimated using a recent tomography model of Ritsema et al. (2011), which has much higher horizontal resolution than previous global models. Most of the strength is localized in the crust for the HRM and in the mantle for the SRM. These results contribute to the long debates on applicability of the "crème brulée" or "jelly-sandwich" model for the lithosphere structure. Changing from the SRM to HRM turns most of the continental areas from the totally decoupled mode to the fully coupled mode of the lithospheric layers. However, in the areas characterized by a high thermal regime and thick crust, the layers remain decoupled even for the HRM. At the same time, for the inner part of the cratons the lithospheric layers are coupled in both models. Therefore, rheological variations lead to large changes in the integrated strength and Te distribution in the regions characterized by intermediate thermal conditions. In these areas temperature uncertainties have a greater effect, since this parameter principally determines rheological behavior. Comparison of the Te estimates for both models with those determined from the flexural loading and spectral analysis shows that the 'hard' rheology is likely applicable for cratonic areas, whereas the 'soft' rheology is more representative for young orogens.

Seismological properties of intermediate-mass stars

NASA Astrophysics Data System (ADS)

Audard, N.; Provost, J.

1994-02-01

Stars more massive than about 1.2 solar mass are characterized by a convective core, which induces at its frontier a rapid variation of the density, sound speed and Brunt-Vaisala frequency, close to a discontinuity. For three stars of 1, 1.5 and 2 solar mass we have studied the properties of p-mode frequencies of high radial order and low degree, and we present results on the effects on p-mode oscillations of some rapid variations of the internal structure. We first point out the difficulties of the classical asymptotic theory to represent with accuracy the p-mode spectrum of the stars considered. We compare the numerical frequencies with asymptotic and polynomial approximations obtained from fits. The variation of the derived global coefficients characterizing the p-mode spectrum along the evolutionary tracks has been estimated; it would help to separate the effects of age and mass of intermediate-mass stars. The sensitivity of these coefficients to stellar parameters substantially depends on the stellar mass and must be considered for asteroseismic calibration. The effects of rapid variations in the stellar internal structure are finally considered. An asymptotic formula taking into account the rapid variation of the sound speed at the convective core boundary of the 1.5 and 2 solar mass stars predicts an oscillatory behavior of the frequencies with a very large period. We also show that the second frequency difference delta2nu = nun, l - 2nun-1, l + nun-2, l exhibits a substantial oscillation which corresponds to the region of the He II ionization of the 1, 1.5 and 2 solar mass stars.

Analyzing the Multiscale Processes in Tropical Cyclone Genesis Associated with African Easterly Waves using the PEEMD. Part I: Downscaling Processes

NASA Astrophysics Data System (ADS)

Wu, Y.; Shen, B. W.; Cheung, S.

2016-12-01

Recent advance in high-resolution global hurricane simulations and visualizations have collectively suggested the importance of both downscaling and upscaling processes in the formation and intensification of TCs. To reveal multiscale processes from massive volume of global data for multiple years, a scalable Parallel Ensemble Empirical Mode Decomposition (PEEMD) method has been developed for the analysis. In this study, the PEEMD is applied to analyzing 10-year (2004-2013) ERA-Interim global 0.750 resolution reanalysis data to explore the role of the downscaling processes in tropical cyclogenesis associated with African Easterly Waves (AEWs). Using the PEEMD, raw data are decomposed into oscillatory Intrinsic Function Modes (IMFs) that represent atmospheric systems of the various length scales and the trend mode that represents a non-oscillatory large scale environmental flow. Among oscillatory modes, results suggest that the third oscillatory mode (IMF3) is statistically correlated with the TC/AEW scale systems. Therefore, IMF3 and trend mode are analyzed in details. Our 10-year analysis shows that more than 50% of the AEW associated hurricanes reveal the association of storms' formation with the significant downscaling shear transfer from the larger-scale trend mode to the smaller scale IMF3. Future work will apply the PEEMD to the analysis of higher-resolution datasets to explore the role of the upscaling processes provided by the convection (or TC) in the development of the TC (or AEW). Figure caption: The tendency for horizontal wind shear for the total winds (black line), IMF3 (blue line), and trend mode (red line) and SLP (black dotted line) along the storm track of Helene (2006).

MOSAIC: a chemical-genetic interaction data repository and web resource for exploring chemical modes of action.

PubMed

Nelson, Justin; Simpkins, Scott W; Safizadeh, Hamid; Li, Sheena C; Piotrowski, Jeff S; Hirano, Hiroyuki; Yashiroda, Yoko; Osada, Hiroyuki; Yoshida, Minoru; Boone, Charles; Myers, Chad L

2018-04-01

Chemical-genomic approaches that map interactions between small molecules and genetic perturbations offer a promising strategy for functional annotation of uncharacterized bioactive compounds. We recently developed a new high-throughput platform for mapping chemical-genetic (CG) interactions in yeast that can be scaled to screen large compound collections, and we applied this system to generate CG interaction profiles for more than 13 000 compounds. When integrated with the existing global yeast genetic interaction network, CG interaction profiles can enable mode-of-action prediction for previously uncharacterized compounds as well as discover unexpected secondary effects for known drugs. To facilitate future analysis of these valuable data, we developed a public database and web interface named MOSAIC. The website provides a convenient interface for querying compounds, bioprocesses (Gene Ontology terms) and genes for CG information including direct CG interactions, bioprocesses and gene-level target predictions. MOSAIC also provides access to chemical structure information of screened molecules, chemical-genomic profiles and the ability to search for compounds sharing structural and functional similarity. This resource will be of interest to chemical biologists for discovering new small molecule probes with specific modes-of-action as well as computational biologists interested in analysing CG interaction networks. MOSAIC is available at http://mosaic.cs.umn.edu. hisyo@riken.jp, yoshidam@riken.jp, charlie.boone@utoronto.ca or chadm@umn.edu. Supplementary data are available at Bioinformatics online.

M3D-K Simulations of Beam-Driven Alfven Eigenmodes in ASDEX-U

NASA Astrophysics Data System (ADS)

Wang, Ge; Fu, Guoyong; Lauber, Philipp; Schneller, Mirjam

2013-10-01

Core-localized Alfven eigenmodes are often observed in neutral beam-heated plasma in ASDEX-U tokamak. In this work, hybrid simulations with the global kinetic/MHD hybrid code M3D-K have been carried out to investigate the linear stability and nonlinear dynamics of beam-driven Alfven eigenmodes using experimental parameters and profiles of an ASDEX-U discharge. The safety factor q profile is weakly reversed with minimum q value about qmin = 3.0. The simulation results show that the n = 3 mode transits from a reversed shear Alfven eigenmode (RSAE) to a core-localized toroidal Alfven eigenmode (TAE) as qmin drops from 3.0 to 2.79, consistent with results from the stability code NOVA as well as the experimental measurement. The M3D-K results are being compared with those of the linear gyrokinetic stability code LIGKA for benchmark. The simulation results will also be compared with the measured mode frequency and mode structure. This work was funded by the Max-Planck/Princeton Center for Plasma Physics.

Aeroelastic Response from Indicial Functions with a Finite Element Model of a Suspension Bridge

NASA Astrophysics Data System (ADS)

Mikkelsen, O.; Jakobsen, J. B.

2017-12-01

The present paper describes a comprehensive analysis of the aeroelastic bridge response in time-domain, with a finite element model of the structure. The main focus is on the analysis of flutter instability, accounting for the wind forces generated by the bridge motion, including twisting as well as vertical and horizontal translation, i.e. all three global degrees of freedom. The solution is obtained by direct integration of the equations of motion for the bridge-wind system, with motion-dependent forces approximated from flutter derivatives in terms of rational functions. For the streamlined bridge box-girder investigated, the motion dependent wind forces related to the along-wind response are found to have a limited influence on the flutter velocity. The flutter mode shapes in the time-domain and the frequency domain are consistent, and composed of the three lowest symmetrical vertical modes coupled with the first torsional symmetric mode. The method applied in this study provides detailed response estimates and contributes to an increased understanding of the complex aeroelastic behaviour of long-span bridges.

Cross-verification of the GENE and XGC codes in preparation for their coupling

NASA Astrophysics Data System (ADS)

Jenko, Frank; Merlo, Gabriele; Bhattacharjee, Amitava; Chang, Cs; Dominski, Julien; Ku, Seunghoe; Parker, Scott; Lanti, Emmanuel

2017-10-01

A high-fidelity Whole Device Model (WDM) of a magnetically confined plasma is a crucial tool for planning and optimizing the design of future fusion reactors, including ITER. Aiming at building such a tool, in the framework of the Exascale Computing Project (ECP) the two existing gyrokinetic codes GENE (Eulerian delta-f) and XGC (PIC full-f) will be coupled, thus enabling to carry out first principle kinetic WDM simulations. In preparation for this ultimate goal, a benchmark between the two codes is carried out looking at ITG modes in the adiabatic electron limit. This verification exercise is also joined by the global Lagrangian PIC code ORB5. Linear and nonlinear comparisons have been carried out, neglecting for simplicity collisions and sources. A very good agreement is recovered on frequency, growth rate and mode structure of linear modes. A similarly excellent agreement is also observed comparing the evolution of the heat flux and of the background temperature profile during nonlinear simulations. Work supported by the US DOE under the Exascale Computing Project (17-SC-20-SC).

The Whole Elephant: A Synoptic View of Liquid Rope Coiling

NASA Astrophysics Data System (ADS)

Ribe, Neil

2016-11-01

Liquid rope coiling is the instability that occurs when e.g. a thin stream of honey is poured onto toast. While we now have a fine-grained understanding of each of the four principal coiling modes (viscous, gravitational, inertio-gravitational and inertial), we still lack a global view of how the modes cohere to form a larger whole. Using a numerical continuation procedure, I determine how the dimensionless coiling frequency depends on the dimensionless fall height and flow rate, for several values of the dimensionless nozzle diameter. Starting with the onset of coiling, I propose a purely geometrical definition of the critical surface between coiling and no coiling as the locus of points where the radius a1 of the rope at the contact point is just equal to the coil radius R. Coiling with a1 > R is impossible because the rope would intersect itself. I characterize the asymptotic limits of the critical surface as well as the structure of the supercritical volume inside that surface. The procedure reveals a new mode of coiling onset that has not yet been identified.

Forced and Internal Multi-Decadal Variability in the North Atlantic and their Climate Impacts

NASA Astrophysics Data System (ADS)

Ting, M.

2017-12-01

Atlantic Multidecadal Variability (AMV), a basin-wide North Atlantic sea surface temperature warming or cooling pattern varying on decadal and longer time scales, is one of the most important climate variations in the Atlantic basin. The AMV has shown to be associated with significant climate impacts regionally and globally, from Atlantic hurricane activities, frequency and severity of droughts across North America, as well as rainfall anomalies across the African Sahel and northeast Brazil. Despite the important impacts of the AMV, its mechanisms are not completely understood. In particular, it is not clear how much of the historical Atlantic SST fluctuations were forced by anthropogenic sources such as greenhouse warming and aerosol cooling, versus driven internally by changes in the coupled ocean-atmosphere processes in the Atlantic. Using climate models such as the NCAR large ensemble simulations, we were able to successfully separate the forced and internally generated North Atlantic sea surface temperature anomalies through a signal-to-noise maximizing Empirical Orthogonal Function (S/N EOF) analysis method. Two forced modes were identified with one representing a hemispherical symmetric mode and one asymmetric mode. The symmetric mode largely represents the greenhouse forced component while the asymmetric mode resembles the anthropogenic aerosol forcing. When statistically removing both of the forced modes, the residual multidecadal Atlantic SST variability shows a very similar structure as the AMV in the preindustrial simulation. The distinct climate impacts of each of these modes are also identified and the implications and challenges for decadal climate prediction will be discussed.

Ion velocity analysis of rotating structures in a magnetic linear plasma device

NASA Astrophysics Data System (ADS)

Claire, N.; Escarguel, A.; Rebont, C.; Doveil, F.

2018-06-01

The MISTRAL device is designed to produce a linear magnetized plasma column. It has been used a few years ago to study a nonlinear low frequency instability exhibiting an azimuthal number m = 2. By changing the experimental configuration of MISTRAL, this work shows experimental results on an m = 1 rotating instability with strongly different behavior. The spatio-temporal evolution of the ion velocity distribution function given by a laser-induced fluorescence diagnostic is measured to infer the radial and azimuthal velocities, ion fluxes, and electric fields. The naive image of a plasma exhibiting a global rotation is again invalidated in this m = 1 mode but in a different way. Contrary to the m = 2 mode, the rotation frequency of the instability is lower than the ion cyclotron frequency and ions exhibit a complex behavior with a radial outward flux inside the unstable arm and azimuthal ion fluxes always directed toward the unstable arm. The azimuthal ion velocity is close to zero inside the ionization region, whereas the radial ion velocity grows linearly with radius. The radial electric field is oriented inward inside the unstable arm and outward outside. An axial velocity perturbation is also present, indicating that contrary to the m = 2 mode, the m = 1 mode is not a flute mode. These results cannot be easily interpreted with existing theories.

Unified approach for calculating the number of confined modes in multilayered waveguiding structures

NASA Astrophysics Data System (ADS)

Ruschin, S.; Griffel, G.; Hardy, A.; Croitoru, N.

1986-01-01

A general formalism is developed in order to find the number of modes and mode cutoff conditions in multilayer waveguiding structures. An explicit expression is presented for the number of confined modes that allows the modes to be counted without having to analyze the specific eigenvalue equation of the structure. The method is illustrated by its application to several structures: the buried layer, the directional coupler, and the three-guide symmetrical arrangement. By a suitable extension of the formalism, the number of well-confined modes is found for a four-layer structure.

Application of attachment modes in the control of large space structures

NASA Technical Reports Server (NTRS)

Craig, Roy R., Jr.

1989-01-01

Various ways are examined to obtain reduced order mathematical models of structures for use in dynamic response analyses and in controller design studies. Attachment modes are deflection shapes of a structure subjected to specified unit load distributions. Attachment modes are frequently employed to supplement free-interface normal modes to improve the modeling of components (structures) employed in component mode synthesis analyses. Deflection shapes of structures subjected to generalized loads of some specified distribution and of unit magnitude can also be considered to be attachment modes. Several papers which were written under this contract are summarized herein.

Spatial localization of resistive drift wave structure in tokamak edge plasmas with an embedded magnetic island

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hu, Shilin; Qu, Hongpeng; Li, Jiquan, E-mail: lijq@energy.kyoto-u.ac.jp

Resistive drift wave instability is investigated numerically in tokamak edge plasma confined by sheared slab magnetic field geometry with an embedded magnetic island. The focus is on the structural characteristics of eigenmode inside the island, where the density profile tends to be flattened. A transition of the dominant eigenmode occurs around a critical island width w{sub c}. For thin islands with a width below w{sub c}, two global long wavelength eigenmodes with approximately the same growth rate but different eigenfrequency are excited, which are stabilized by the magnetic island through two-dimensional mode coupling in both x and y (corresponding tomore » radial and poloidal in tokamak) directions. On the other hand, a short wavelength eigenmode, which is destabilized by thick islands with a width above w{sub c}, dominates the edge fluctuation, showing a prominent structural localization in the region between the X-point and the O-point of the magnetic island. The main destabilization mechanism is identified as the mode coupling in the y direction, which is similar to the so-called toroidal coupling in tokamak plasmas. These three eigenmodes may coexist in the drift wave fluctuation for the island with a width around w{sub c}. It is demonstrated that the structural localization results mainly from the quasilinear flattening of density profile inside the magnetic island.« less

Reconfigurable wireless monitoring systems for bridges: validation on the Yeondae Bridge

NASA Astrophysics Data System (ADS)

Kim, Junhee; Lynch, Jerome P.; Zonta, Daniele; Lee, Jong-Jae; Yun, Chung-Bang

2009-03-01

The installation of a structural monitoring system on a medium- to large-span bridge can be a challenging undertaking due to high system costs and time consuming installations. However, these historical challenges can be eliminated by using wireless sensors as the primary building block of a structural monitoring system. Wireless sensors are low-cost data acquisition nodes that utilize wireless communication to transfer data from the sensor to the data repository. Another advantageous characteristic of wireless sensors is their ability to be easily removed and reinstalled in another sensor location on the same structure; this installation modularity is highlighted in this study. Wireless sensor nodes designed for structural monitoring applications are installed on the 180 m long Yeondae Bridge (Korea) to measure the dynamic response of the bridge to controlled truck loading. To attain a high nodal density with a small number (20) of wireless sensors, the wireless sensor network is installed three times with each installation concentrating sensors in one portion of the bridge. Using forced and free vibration response data from the three installations, the modal properties of the bridge are accurately identified. Intentional nodal overlapping of the three different sensor installations allows mode shapes from each installation to be stitched together into global mode shapes. Specifically, modal properties of the Yeondae Bridge are derived off-line using frequency domain decomposition (FDD) modal analysis methods.

A Simple Model of Global Aerosol Indirect Effects

NASA Technical Reports Server (NTRS)

Ghan, Steven J.; Smith, Steven J.; Wang, Minghuai; Zhang, Kai; Pringle, Kirsty; Carslaw, Kenneth; Pierce, Jeffrey; Bauer, Susanne; Adams, Peter

2013-01-01

Most estimates of the global mean indirect effect of anthropogenic aerosol on the Earth's energy balance are from simulations by global models of the aerosol lifecycle coupled with global models of clouds and the hydrologic cycle. Extremely simple models have been developed for integrated assessment models, but lack the flexibility to distinguish between primary and secondary sources of aerosol. Here a simple but more physically based model expresses the aerosol indirect effect (AIE) using analytic representations of cloud and aerosol distributions and processes. Although the simple model is able to produce estimates of AIEs that are comparable to those from some global aerosol models using the same global mean aerosol properties, the estimates by the simple model are sensitive to preindustrial cloud condensation nuclei concentration, preindustrial accumulation mode radius, width of the accumulation mode, size of primary particles, cloud thickness, primary and secondary anthropogenic emissions, the fraction of the secondary anthropogenic emissions that accumulates on the coarse mode, the fraction of the secondary mass that forms new particles, and the sensitivity of liquid water path to droplet number concentration. Estimates of present-day AIEs as low as 5 W/sq m and as high as 0.3 W/sq m are obtained for plausible sets of parameter values. Estimates are surprisingly linear in emissions. The estimates depend on parameter values in ways that are consistent with results from detailed global aerosol-climate simulation models, which adds to understanding of the dependence on AIE uncertainty on uncertainty in parameter values.

Asymmetric DE3 causes WN3 in the ionosphere

NASA Astrophysics Data System (ADS)

Jiang, Jinzhe; Wan, Weixing; Ren, Zhipeng; Yue, Xinan

2018-08-01

This study investigates a mechanism to generate the wavenumber-3 longitude variation in the ionosphere, using the simulations with the Global Coupled Ionosphere Thermosphere Electrodynamics Model, developed by the Institute of Geology and Geophysics, Chinese Academy of Sciences (GCITEM-IGGCAS). Due to the asymmetry of geomagnetic field, the asymmetric Hough mode of diurnal eastward wavenumber-3 (DE3) also produces the WN3 structure in the ionosphere by coupling with the magnetic line. The densities of the neutral mass and the plasmas in the ionosphere are studied in detail. The results show a clear WN3 pattern driven by tide's electro-dynamical coupling. We then conclude that the asymmetric component of the DE3 can also cause the WN3 structure in the ionosphere, which confirms the assumption that more than one source could generate WN3 structure in previous studies.

FeRh ground state and martensitic transformation

DOE PAGES

Zarkevich, Nikolai A.; Johnson, Duane D.

2018-01-09

Cubic B2 FeRh exhibits a metamagnetic transition [(111) antiferromagnet (AFM) to ferromagnet (FM)] around 353 K and remains structurally stable at higher temperatures. However, the calculated zero-Kelvin phonons of AFM FeRh exhibit imaginary modes at M points in the Brillouin zone, indicating a premartensitic instability, which is a precursor to a martensitic transformation at low temperatures. Combining electronic-structure calculations with ab initio molecular dynamics, conjugate gradient relaxation, and the solid-state nudged-elastic band methods, we predict that AFM B2 FeRh becomes unstable at ambient pressure and transforms without a barrier to an AFM(111) orthorhombic (martensitic) ground state below 90±10K. In conclusion,more » we also consider competing structures, in particular, a tetragonal AFM(100) phase that is not the global ground state, as proposed, but a constrained solution.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zarkevich, Nikolai A.; Johnson, Duane D.

Cubic B2 FeRh exhibits a metamagnetic transition [(111) antiferromagnet (AFM) to ferromagnet (FM)] around 353 K and remains structurally stable at higher temperatures. However, the calculated zero-Kelvin phonons of AFM FeRh exhibit imaginary modes at M points in the Brillouin zone, indicating a premartensitic instability, which is a precursor to a martensitic transformation at low temperatures. Combining electronic-structure calculations with ab initio molecular dynamics, conjugate gradient relaxation, and the solid-state nudged-elastic band methods, we predict that AFM B2 FeRh becomes unstable at ambient pressure and transforms without a barrier to an AFM(111) orthorhombic (martensitic) ground state below 90±10K. In conclusion,more » we also consider competing structures, in particular, a tetragonal AFM(100) phase that is not the global ground state, as proposed, but a constrained solution.« less

From Principal Component to Direct Coupling Analysis of Coevolution in Proteins: Low-Eigenvalue Modes are Needed for Structure Prediction

PubMed Central

Cocco, Simona; Monasson, Remi; Weigt, Martin

2013-01-01

Various approaches have explored the covariation of residues in multiple-sequence alignments of homologous proteins to extract functional and structural information. Among those are principal component analysis (PCA), which identifies the most correlated groups of residues, and direct coupling analysis (DCA), a global inference method based on the maximum entropy principle, which aims at predicting residue-residue contacts. In this paper, inspired by the statistical physics of disordered systems, we introduce the Hopfield-Potts model to naturally interpolate between these two approaches. The Hopfield-Potts model allows us to identify relevant ‘patterns’ of residues from the knowledge of the eigenmodes and eigenvalues of the residue-residue correlation matrix. We show how the computation of such statistical patterns makes it possible to accurately predict residue-residue contacts with a much smaller number of parameters than DCA. This dimensional reduction allows us to avoid overfitting and to extract contact information from multiple-sequence alignments of reduced size. In addition, we show that low-eigenvalue correlation modes, discarded by PCA, are important to recover structural information: the corresponding patterns are highly localized, that is, they are concentrated in few sites, which we find to be in close contact in the three-dimensional protein fold. PMID:23990764

Experimental validation of non-uniformity effect of the radial electric field on the edge transport barrier formation in JT-60U H-mode plasmas

PubMed Central

Kamiya, K.; Itoh, K.; Itoh, S.-I.

2016-01-01

The turbulent structure formation, where strongly-inhomogeneous turbulence and global electromagnetic fields are self-organized, is a fundamental mechanism that governs the evolution of high-temperature plasmas in the universe and laboratory (e.g., the generation of edge transport barrier (ETB) of the H-mode in the toroidal plasmas). The roles of inhomogeneities of radial electric field (Er) are known inevitable. In this mechanism, whether the first derivative of Er (shear) or the second derivative of Er (curvature) works most is decisive in determining the class of nontrivial solutions (which describe the barrier structure). Here we report the experimental identification of the essential role of the Er-curvature on the ETB formation, for the first time, based on the high-spatiotemporal resolution spectroscopic measurement. We found the decisive importance of Er-curvature on ETB formation during ELM-free phase, but there is only a low correlation with the Er-shear value at the peak of normalized ion temperature gradient. Furthermore, in the ELMing phase, the effect of curvature is also quantified in terms of the relationship between pedestal width and thickness of the layer of inhomogeneous Er. This is the fundamental basis to understand the structure of transport barriers in fusion plasmas. PMID:27480931

Nonlinear structural joint model updating based on instantaneous characteristics of dynamic responses

NASA Astrophysics Data System (ADS)

Wang, Zuo-Cai; Xin, Yu; Ren, Wei-Xin

2016-08-01

This paper proposes a new nonlinear joint model updating method for shear type structures based on the instantaneous characteristics of the decomposed structural dynamic responses. To obtain an accurate representation of a nonlinear system's dynamics, the nonlinear joint model is described as the nonlinear spring element with bilinear stiffness. The instantaneous frequencies and amplitudes of the decomposed mono-component are first extracted by the analytical mode decomposition (AMD) method. Then, an objective function based on the residuals of the instantaneous frequencies and amplitudes between the experimental structure and the nonlinear model is created for the nonlinear joint model updating. The optimal values of the nonlinear joint model parameters are obtained by minimizing the objective function using the simulated annealing global optimization method. To validate the effectiveness of the proposed method, a single-story shear type structure subjected to earthquake and harmonic excitations is simulated as a numerical example. Then, a beam structure with multiple local nonlinear elements subjected to earthquake excitation is also simulated. The nonlinear beam structure is updated based on the global and local model using the proposed method. The results show that the proposed local nonlinear model updating method is more effective for structures with multiple local nonlinear elements. Finally, the proposed method is verified by the shake table test of a real high voltage switch structure. The accuracy of the proposed method is quantified both in numerical and experimental applications using the defined error indices. Both the numerical and experimental results have shown that the proposed method can effectively update the nonlinear joint model.

Failure Analysis of Alumina Reinforced Aluminum Microtruss and Tube Composites

NASA Astrophysics Data System (ADS)

Chien, Hsueh Fen (Karen)

The energy absorption capacity of cellular materials can be dramatically increased by applying a structural coating. This thesis examined the failure mechanisms of alumina reinforced 3003 aluminum alloy microtrusses and tubes. Alumina coatings were produced by hard anodizing and by plasma electrolytic oxidation (PEO). The relatively thin and discontinuous oxide coating at the hinge acted as a localized weak spot which triggered a chain reaction of failure, including oxide fracture, oxide spallation, oxide penetration to the aluminum core and severe local plastic deformation of the core. For the PEO microtrusses, delamination occurred within the oxide coating resulting in a global strut buckling failure mode. A new failure mode for the anodized tubes was observed: (i) axisymmetric folding of the aluminum core, (ii) longitudinal fracture, and (iii) alumina pulverization. Overall, the alumina coating enhanced the buckling resistance of the composites, while the aluminum core supported the oxide during the damage propagation.

Light water reactor lower head failure analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rempe, J.L.; Chavez, S.A.; Thinnes, G.L.

1993-10-01

This document presents the results from a US Nuclear Regulatory Commission-sponsored research program to investigate the mode and timing of vessel lower head failure. Major objectives of the analysis were to identify plausible failure mechanisms and to develop a method for determining which failure mode would occur first in different light water reactor designs and accident conditions. Failure mechanisms, such as tube ejection, tube rupture, global vessel failure, and localized vessel creep rupture, were studied. Newly developed models and existing models were applied to predict which failure mechanism would occur first in various severe accident scenarios. So that a broadermore » range of conditions could be considered simultaneously, calculations relied heavily on models with closed-form or simplified numerical solution techniques. Finite element techniques-were employed for analytical model verification and examining more detailed phenomena. High-temperature creep and tensile data were obtained for predicting vessel and penetration structural response.« less

Vibrational excitation and dissociative attachment of a triatomic molecule: CO/sub 2/ in the collinear approximation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wong, C.F.; Light, J.C.

1986-02-01

The effective R-matrix model and the R-matrix propagative method applied earlier to elec- tron--diatomic-molecule scattering are extended to treat dissociative attachment of collinear triatomic molecules. To describe the vibrational excitation and dissociative attachment of CO/sub 2/ in the 4-eV region, the nuclear dynamics is solved on a Wall-Porter potential-energy surface. A hybrid approach is developed in which the L/sup 2/ and R-matrix propagation methods are combined to evaluate the global R matrix. Our calculations show that it is easier to excite the symmetric mode vibrations than the asymmetric mode vibrations. Our results also show that the observed structures in themore » energy dependence of the dissociative attachment cross sections are due to the vibrational states of the negative ion (CO/sub 2/ /sup -/) and not to the vibrational states of the CO fragment.« less

Synchronous x-ray and radio mode switches: a rapid global transformation of the pulsar magnetosphere.

PubMed

Hermsen, W; Hessels, J W T; Kuiper, L; van Leeuwen, J; Mitra, D; de Plaa, J; Rankin, J M; Stappers, B W; Wright, G A E; Basu, R; Alexov, A; Coenen, T; Grießmeier, J-M; Hassall, T E; Karastergiou, A; Keane, E; Kondratiev, V I; Kramer, M; Kuniyoshi, M; Noutsos, A; Serylak, M; Pilia, M; Sobey, C; Weltevrede, P; Zagkouris, K; Asgekar, A; Avruch, I M; Batejat, F; Bell, M E; Bell, M R; Bentum, M J; Bernardi, G; Best, P; Bîrzan, L; Bonafede, A; Breitling, F; Broderick, J; Brüggen, M; Butcher, H R; Ciardi, B; Duscha, S; Eislöffel, J; Falcke, H; Fender, R; Ferrari, C; Frieswijk, W; Garrett, M A; de Gasperin, F; de Geus, E; Gunst, A W; Heald, G; Hoeft, M; Horneffer, A; Iacobelli, M; Kuper, G; Maat, P; Macario, G; Markoff, S; McKean, J P; Mevius, M; Miller-Jones, J C A; Morganti, R; Munk, H; Orrú, E; Paas, H; Pandey-Pommier, M; Pandey, V N; Pizzo, R; Polatidis, A G; Rawlings, S; Reich, W; Röttgering, H; Scaife, A M M; Schoenmakers, A; Shulevski, A; Sluman, J; Steinmetz, M; Tagger, M; Tang, Y; Tasse, C; ter Veen, S; Vermeulen, R; van de Brink, R H; van Weeren, R J; Wijers, R A M J; Wise, M W; Wucknitz, O; Yatawatta, S; Zarka, P

2013-01-25

Pulsars emit from low-frequency radio waves up to high-energy gamma-rays, generated anywhere from the stellar surface out to the edge of the magnetosphere. Detecting correlated mode changes across the electromagnetic spectrum is therefore key to understanding the physical relationship among the emission sites. Through simultaneous observations, we detected synchronous switching in the radio and x-ray emission properties of PSR B0943+10. When the pulsar is in a sustained radio-"bright" mode, the x-rays show only an unpulsed, nonthermal component. Conversely, when the pulsar is in a radio-"quiet" mode, the x-ray luminosity more than doubles and a 100% pulsed thermal component is observed along with the nonthermal component. This indicates rapid, global changes to the conditions in the magnetosphere, which challenge all proposed pulsar emission theories.

Global two-fluid simulations of geodesic acoustic modes in strongly shaped tight aspect ratio tokamak plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Robinson, J. R.; Hnat, B.; Thyagaraja, A.

2013-05-15

Following recent observations suggesting the presence of the geodesic acoustic mode (GAM) in ohmically heated discharges in the Mega Amp Spherical Tokamak (MAST) [J. R. Robinson et al., Plasma Phys. Controlled Fusion 54, 105007 (2012)], the behaviour of the GAM is studied numerically using the two fluid, global code CENTORI [P. J. Knight et al. Comput. Phys. Commun. 183, 2346 (2012)]. We examine mode localisation and effects of magnetic geometry, given by aspect ratio, elongation, and safety factor, on the observed frequency of the mode. An excellent agreement between simulations and experimental data is found for simulation plasma parameters matchedmore » to those of MAST. Increasing aspect ratio yields good agreement between the GAM frequency found in the simulations and an analytical result obtained for elongated large aspect ratio plasmas.« less

Projective synchronization of nonidentical fractional-order neural networks based on sliding mode controller.

PubMed

Ding, Zhixia; Shen, Yi

2016-04-01

This paper investigates global projective synchronization of nonidentical fractional-order neural networks (FNNs) based on sliding mode control technique. We firstly construct a fractional-order integral sliding surface. Then, according to the sliding mode control theory, we design a sliding mode controller to guarantee the occurrence of the sliding motion. Based on fractional Lyapunov direct methods, system trajectories are driven to the proposed sliding surface and remain on it evermore, and some novel criteria are obtained to realize global projective synchronization of nonidentical FNNs. As the special cases, some sufficient conditions are given to ensure projective synchronization of identical FNNs, complete synchronization of nonidentical FNNs and anti-synchronization of nonidentical FNNs. Finally, one numerical example is given to demonstrate the effectiveness of the obtained results. Copyright © 2016 Elsevier Ltd. All rights reserved.

An SMS (single mode - multi mode - single mode) fiber structure for vibration sensing

NASA Astrophysics Data System (ADS)

Waluyo, T. B.; Bayuwati, D.

2017-04-01

We describe an SMS (single mode - multi mode - single mode) fiber structure to be used in a vibration sensing system. The fiber structure was fabricated by splicing a section (about 300 mm in length) of a step index multi mode fiber between two single mode fibers obtained from a communication grade fiber patchcord. Interference between higher order modes occurs while light from a narrow band light source travels along the multi mode fiber. When the multi mode fiber vibrates, the refractive index profile is changed because of the photo-elastics effect and the amplitude of the interference pattern is changed accordingly. To simulate a vibrating structure we used a loudspeaker to vibrate a wooden table. By using a digital oscilloscope, we recorded and analysed the vibrating signals obtained from the SMS fiber structure as well as from a GS-32CT geophone for referencing. We observed that this SMS fiber structure was potential to be used in a vibration sensing system with a measurement range from 30 to 180 Hz with inherent optical fiber sensor advantages such as light weight, immune to electromagnetic interference, and no electricity in the sensing part.

The Global Mode-1 S2 Internal Tide

NASA Astrophysics Data System (ADS)

Zhao, Zhongxiang

2017-11-01

The global mode-1 S2 internal tide is observed using sea surface height (SSH) measurements from four satellite altimeters: TOPEX/Poseidon, Jason-1, Jason-2, and Geosat Follow-On. Plane wave analysis is employed to extract three mode-1 S2 internal tidal waves in any given 250 km by 250 km window, which are temporally coherent over a 20 year period from 1992 to 2012. Depth-integrated energy and flux of the S2 internal tide are calculated from the SSH amplitude and a conversion function built from climatological hydrographic profiles in the World Ocean Atlas 2013. The results show that the S2 and M2 internal tides have similar spatial patterns. Both S2 and M2 internal tides originate at major topographic features and propagate over long distances. The S2 internal tidal beams are generally shorter, likely because the relatively weaker S2 internal tide is easily overwhelmed by nontidal noise. The northbound S2 and M2 internal tides from the Hawaiian Ridge are observed to travel over 3500 km across the Northeast Pacific. The globally integrated energy of the mode-1 S2 internal tide is 7.8 PJ (1 PJ = 1015 J), about 20% that of M2 (36.4 PJ). The histogram of S2 to M2 SSH ratios peaks at 0.4, consistent with the square root of their energy ratio. In terms of SSH, S2 is greater than M2 in ≈10% of the global ocean and ≥50% of M2 in about half of the global ocean.

The global rotating scalar field vacuum on anti-de Sitter space-time

NASA Astrophysics Data System (ADS)

Kent, Carl; Winstanley, Elizabeth

2015-01-01

We consider the definition of the global vacuum state of a quantum scalar field on n-dimensional anti-de Sitter space-time as seen by an observer rotating about the polar axis. Since positive (or negative) frequency scalar field modes must have positive (or negative) Klein-Gordon norm respectively, we find that the only sensible choice of positive frequency corresponds to positive frequency as seen by a static observer. This means that the global rotating vacuum is identical to the global nonrotating vacuum. For n ≥ 4, if the angular velocity of the rotating observer is smaller than the inverse of the anti-de Sitter radius of curvature, then modes with positive Klein-Gordon norm also have positive frequency as seen by the rotating observer. We comment on the implications of this result for the construction of global rotating thermal states.

Inhibition in motor imagery: a novel action mode switching paradigm.

PubMed

Rieger, Martina; Dahm, Stephan F; Koch, Iring

2017-04-01

Motor imagery requires that actual movements are prevented (i.e., inhibited) from execution. To investigate at what level inhibition takes place in motor imagery, we developed a novel action mode switching paradigm. Participants imagined (indicating only start and end) and executed movements from start buttons to target buttons, and we analyzed trial sequence effects. Trial sequences depended on current action mode (imagination or execution), previous action mode (pure blocks/same mode, mixed blocks/same mode, or mixed blocks/other mode), and movement sequence (action repetition, hand repetition, or hand alternation). Results provided evidence for global inhibition (indicated by switch benefits in execution-imagination (E-I)-sequences in comparison to I-I-sequences), effector-specific inhibition (indicated by hand repetition costs after an imagination trial), and target inhibition (indicated by target repetition benefits in I-I-sequences). No evidence for subthreshold motor activation or action-specific inhibition (inhibition of the movement of an effector to a specific target) was obtained. Two (global inhibition and effector-specific inhibition) of the three observed mechanisms are active inhibition mechanisms. In conclusion, motor imagery is not simply a weaker form of execution, which often is implied in views focusing on similarities between imagination and execution.

Composite Study Of Aerosol Long-Range Transport Events From East Asia And North America

NASA Astrophysics Data System (ADS)

Jiang, X.; Waliser, D. E.; Guan, B.; Xavier, P.; Petch, J.; Klingaman, N. P.; Woolnough, S.

2011-12-01

While the Madden-Julian Oscillation (MJO) exerts pronounced influences on global climate and weather systems, current general circulation models (GCMs) exhibit rather limited capability in representing this prominent tropical variability mode. Meanwhile, the fundamental physics of the MJO are still elusive. Given the central role of the diabatic heating for prevailing MJO theories and demands for reducing the model deficiencies in simulating the MJO, a global model inter-comparison project on diabatic processes and vertical heating structure associated with the MJO has been coordinated through a joint effort by the WCRP-WWRP/THORPEX YOTC MJO Task Force and GEWEX GASS Program. In this presentation, progress of this model inter-comparison project will be reported, with main focus on climate simulations from about 27 atmosphere-only and coupled GCMs. Vertical structures of heating and diabatic processes associated with the MJO based on multi-model simulations will be presented along with their reanalysis and satellite estimate counterparts. Key processes possibly responsible for a realistic simulation of the MJO, including moisture-convection interaction, gross moist stability, ocean coupling, and surface heat flux, will be discussed.

Observation of trapped-electron-mode microturbulence in reversed field pinch plasmas

NASA Astrophysics Data System (ADS)

Duff, J. R.; Williams, Z. R.; Brower, D. L.; Chapman, B. E.; Ding, W. X.; Pueschel, M. J.; Sarff, J. S.; Terry, P. W.

2018-01-01

Density fluctuations in the large-density-gradient region of improved confinement Madison Symmetric Torus reversed field pinch (RFP) plasmas exhibit multiple features that are characteristic of the trapped-electron mode (TEM). Core transport in conventional RFP plasmas is governed by magnetic stochasticity stemming from multiple long-wavelength tearing modes. Using inductive current profile control, these tearing modes are reduced, and global confinement is increased to that expected for comparable tokamak plasmas. Under these conditions, new short-wavelength fluctuations distinct from global tearing modes appear in the spectrum at a frequency of f ˜ 50 kHz, which have normalized perpendicular wavenumbers k⊥ρs≲ 0.2 and propagate in the electron diamagnetic drift direction. They exhibit a critical-gradient threshold, and the fluctuation amplitude increases with the local electron density gradient. These characteristics are consistent with predictions from gyrokinetic analysis using the Gene code, including increased TEM turbulence and transport from the interaction of remnant tearing magnetic fluctuations and zonal flow.

Predator-prey modeling of the coupling of co-propagating CAE to kink modes

NASA Astrophysics Data System (ADS)

Fredrickson, Eric

2012-10-01

Co-propagating Compressional Alfven eigenmodes (CAE) with shorter wavelength and higher frequency than the counter-propagating CAE and Global Alfven eigenmodes (GAE) often accompany a low frequency n=1 kink. The lower frequency CAE and GAE are excited through a Doppler-shifted cyclotron resonance; the high frequency CAE (hfCAE) through a simple parallel resonance. We present measurements of the mode structure and spectrum of the hfCAE, and compare those measurements to predictions of a simple model for CAE. The modes are bursting with a typical burst frequency on the order of a few kHz. The n=1 kink frequency is usually higher than this, but when the kink frequency does drop towards the hfCAE burst frequency, the hfCAE burst frequency can become locked with the kink frequency. A simple predator-prey model to simulate the hfCAE bursting demonstrates that a modulation of the growth or damping rate by a few percent, at a frequency near the natural burst frequency, can lock the burst frequency to the modulation frequency. The modulation of the damping rate is postulated to be through a coupling of the kink with a symmetry-breaking error field. The deeper question is how the kink interaction with a locked mode can affect the damping/growth rates of the CAE.

Trade in health services.

PubMed Central

Chanda, Rupa

2002-01-01

In light of the increasing globalization of the health sector, this article examines ways in which health services can be traded, using the mode-wise characterization of trade defined in the General Agreement on Trade in Services. The trade modes include cross- border delivery of health services via physical and electronic means, and cross-border movement of consumers, professionals, and capital. An examination of the positive and negative implications of trade in health services for equity, efficiency, quality, and access to health care indicates that health services trade has brought mixed benefits and that there is a clear role for policy measures to mitigate the adverse consequences and facilitate the gains. Some policy measures and priority areas for action are outlined, including steps to address the "brain drain"; increasing investment in the health sector and prioritizing this investment better; and promoting linkages between private and public health care services to ensure equity. Data collection, measures, and studies on health services trade all need to be improved, to assess better the magnitude and potential implications of this trade. In this context, the potential costs and benefits of trade in health services are shaped by the underlying structural conditions and existing regulatory, policy, and infrastructure in the health sector. Thus, appropriate policies and safeguard measures are required to take advantage of globalization in health services. PMID:11953795

Analysis of Composite Skin-Stiffener Debond Specimens Using a Shell/3D Modeling Technique and Submodeling

NASA Technical Reports Server (NTRS)

OBrien, T. Kevin (Technical Monitor); Krueger, Ronald; Minguet, Pierre J.

2004-01-01

The application of a shell/3D modeling technique for the simulation of skin/stringer debond in a specimen subjected to tension and three-point bending was studied. The global structure was modeled with shell elements. A local three-dimensional model, extending to about three specimen thicknesses on either side of the delamination front was used to model the details of the damaged section. Computed total strain energy release rates and mixed-mode ratios obtained from shell/3D simulations were in good agreement with results obtained from full solid models. The good correlation of the results demonstrated the effectiveness of the shell/3D modeling technique for the investigation of skin/stiffener separation due to delamination in the adherents. In addition, the application of the submodeling technique for the simulation of skin/stringer debond was also studied. Global models made of shell elements and solid elements were studied. Solid elements were used for local submodels, which extended between three and six specimen thicknesses on either side of the delamination front to model the details of the damaged section. Computed total strain energy release rates and mixed-mode ratios obtained from the simulations using the submodeling technique were not in agreement with results obtained from full solid models.

A New Lunar Globe as Seen by the Moon Mineralogy Mapper: Image Coverage Spectral Dimensionality and Statistical Anomalies

NASA Technical Reports Server (NTRS)

Boardman, J. W.; Pieters, C. M.; Green, R. O.; Clark, R. N.; Sunshine, J.; Combe, J.-P.; Isaacson, P.; Lundeen, S. R.; Malaret, E.; McCord, T.;

Behavior of piezoelectric wafer active sensor in various media

NASA Astrophysics Data System (ADS)

Kamas, Tuncay

The dissertation addresses structural health monitoring (SHM) techniques using ultrasonic waves generated by piezoelectric wafer active sensors (PWAS) with an emphasis on the development of theoretical models of standing harmonic waves and guided waves. The focal objective of the research is to extend the theoretical study of electro-mechanical coupled PWAS as a resonator/transducer that interacts with standing and traveling waves in various media through electro-mechanical impedance spectroscopy (EMIS) method and guided wave propagation. The analytical models are developed and the coupled field finite element analysis (CF-FEA) models are simulated and verified with experiments. The dissertation is divided into two parts with respect to the developments in EMIS methods and GWP methods. In the first part, analytical and finite element models have been developed for the simulation of PWAS-EMIS in in-plane (longitudinal) and out-of-plane (thickness) mode. Temperature effects on free PWAS-EMIS are also discussed with respect to the in-plane mode. Piezoelectric material degradation on certain electrical and mechanical properties as the temperature increases is simulated by our analytical model for in-plane circular PWAS-EMIS that agrees well with the sets of experiments. Then the thickness mode PWAS-EMIS model was further developed for a PWAS resonator bonded on a plate-like structure. The latter analytical model was to determine the resonance frequencies for the normal mode expansion method through the global matrix method by considering PWAS-substrate and proof mass-PWAS-substrate models. The proof mass concept was adapted to shift the systems resonance frequencies in thickness mode. PWAS in contact with liquid medium on one of its surface has been analytically modeled and simulated the electro-mechanical response of PWAS with various liquids with different material properties such as the density and the viscosity. The second part discusses the guided wave propagation in elastic structures. The feature guided waves in thick structures and in high frequency range are discussed considering weld guided quasi-Rayleigh waves. Furthermore, the weld guided quasi Rayleigh waves and their interaction with damages in thick plates and thick walled pipes are examined by the finite element models and experiments. The dissertation finishes with a summary of contributions followed by conclusions, and suggestions for future work.

Non-normality and classification of amplification mechanisms in stability and resolvent analysis

NASA Astrophysics Data System (ADS)

Symon, Sean; Rosenberg, Kevin; Dawson, Scott T. M.; McKeon, Beverley J.

2018-05-01

Eigenspectra and pseudospectra of the mean-linearized Navier-Stokes operator are used to characterize amplification mechanisms in laminar and turbulent flows in which linear mechanisms are important. Success of mean flow (linear) stability analysis for a particular frequency is shown to depend on whether two scalar measures of non-normality agree: (1) the product between the resolvent norm and the distance from the imaginary axis to the closest eigenvalue and (2) the inverse of the inner product between the most amplified resolvent forcing and response modes. If they agree, the resolvent operator can be rewritten in its dyadic representation to reveal that the adjoint and forward stability modes are proportional to the forcing and response resolvent modes at that frequency. Hence the real parts of the eigenvalues are important since they are responsible for resonant amplification and the resolvent operator is low rank when the eigenvalues are sufficiently separated in the spectrum. If the amplification is pseudoresonant, then resolvent analysis is more suitable to understand the origin of observed flow structures. Two test cases are studied: low Reynolds number cylinder flow and turbulent channel flow. The first deals mainly with resonant mechanisms, hence the success of both classical and mean stability analysis with respect to predicting the critical Reynolds number and global frequency of the saturated flow. Both scalar measures of non-normality agree for the base and mean flows, and the region where the forcing and response modes overlap scales with the length of the recirculation bubble. In the case of turbulent channel flow, structures result from both resonant and pseudoresonant mechanisms, suggesting that both are necessary elements to sustain turbulence. Mean shear is exploited most efficiently by stationary disturbances while bounds on the pseudospectra illustrate how pseudoresonance is responsible for the most amplified disturbances at spatial wavenumbers and temporal frequencies corresponding to well-known turbulent structures. Some implications for flow control are discussed.

Recurrent Interannual Climate Modes and Teleconnection Linking North America Warm Season Precipitation Anomalies to Asia Summer Monsoon Variability

NASA Technical Reports Server (NTRS)

Lau, K. M.; Weng, H. Y.; Einaudi, Franco (Technical Monitor)

2001-01-01

In this paper, we present results showing that summertime precipitation anomalies over North America and East Asia may be linked via pan-Pacific teleconnection patterns, which are components of two dominant recurring global climate modes. The first mode (Mode-1) features an inverse relationship between rainfall anomaly over the US Midwest/central to the eastern/southeastern regions, coupled to a mid-tropospheric high-low pressure system over the northwest and southeast of the US, which regulates low level moisture transport from the Gulf of Mexico to the Midwest. The regional circulation pattern appears to be a part of a global climate mode spanning Eurasia, the North Pacific, North America, and the Atlantic. This mode is associated with coherent fluctuations of jetstream variability over East Asia, and Eurasia, SST in the North Pacific and the North Atlantic. While Mode-1 is moderately correlated with El Nino-Southern Oscillation (ENSO), it appears to be distinct from it, with strong influences from mid-latitude or possibly from higher latitude processes. Results show that Mode-1 not only has an outstanding contribution to the great flood of 1993, it has large contribution to the US precipitation anomalies in other years. Also noted is an apparent increase in influence of Mode-1 on US summertime precipitation in the last two decades since 1977.

Generalization of soft phonon modes

NASA Astrophysics Data System (ADS)

Rudin, Sven P.

2018-04-01

Soft phonon modes describe a collective movement of atoms that transform a higher-symmetry crystal structure into a lower-symmetry crystal structure. Such structural transformations occur at finite temperatures, where the phonons (i.e., the low-temperature vibrational modes) and the static perfect crystal structures provide an incomplete picture of the dynamics. Here, principal vibrational modes (PVMs) are introduced as descriptors of the dynamics of a material system with N atoms. The PVMs represent the independent collective movements of the atoms at a given temperature. Molecular dynamics (MD) simulations, here in the form of quantum MD using density functional theory calculations, provide both the data describing the atomic motion and the data used to construct the PVMs. The leading mode, PVM0, represents the 3 N -dimensional direction in which the system moves with greatest amplitude. For structural phase transitions, PVM0 serves as a generalization of soft phonon modes. At low temperatures, PVM0 reproduces the soft phonon mode in systems where one phonon dominates the phase transformation. In general, multiple phonon modes combine to describe a transformation, in which case PVM0 culls these phonon modes. Moreover, while soft phonon modes arise in the higher-symmetry crystal structure, PVM0 can be equally well calculated on either side of the structural phase transition. Two applications demonstrate these properties: first, transitions into and out of bcc titanium, and, second, the two crystal structures proposed for the β phase of uranium, the higher-symmetry structure of which stabilizes with temperature.

Convective and global stability analysis of a Mach 5.8 boundary layer grazing a compliant surface

NASA Astrophysics Data System (ADS)

Dettenrieder, Fabian; Bodony, Daniel

2016-11-01

Boundary layer transition on high-speed vehicles is expected to be affected by unsteady surface compliance. The stability properties of a Mach 5.8 zero-pressure-gradient laminar boundary layer grazing a nominally-flat thermo-mechanically compliant panel is considered. The linearized compressible Navier-Stokes equations describe small amplitude disturbances in the fluid while the panel deformations are described by the Kirchhoff-Love plate equation and its thermal state by the transient heat equation. Compatibility conditions that couple disturbances in the fluid to those in the solid yield simple algebraic and robin boundary conditions for the velocity and thermal states, respectively. A local convective stability analysis shows that the panel can modify both the first and second Mack modes when, for metallic-like panels, the panel thickness exceeds the lengthscale δ99 Rex- 0 . 5 . A global stability analysis, which permits finite panel lengths with clamped-clamped boundary conditions, shows a rich eigenvalue spectrum with several branches. Unstable modes are found with streamwise-growing panel deformations leading to Mach wave-type radiation. Stable global modes are also found and have distinctly different panel modes but similar radiation patterns. Air Force Office of Scientific Research.

Sensitivity analysis for the control of supersonic impinging jet noise

NASA Astrophysics Data System (ADS)

Nichols, Joseph W.; Hildebrand, Nathaniel

2016-11-01

The dynamics of a supersonic jet that impinges perpendicularly on a flat plate depend on complex interactions between fluid turbulence, shock waves, and acoustics. Strongly organized oscillations emerge, however, and they induce loud, often damaging, tones. We investigate this phenomenon using unstructured, high-fidelity Large Eddy Simulation (LES) and global stability analysis. Our flow configurations precisely match laboratory experiments with nozzle-to-wall distances of 4 and 4.5 jet diameters. We use multi-block shift-and-invert Arnoldi iteration to extract both direct and adjoint global modes that extend upstream into the nozzle. The frequency of the most unstable global mode agrees well with that of the emergent oscillations in the LES. We compute the "wavemaker" associated with this mode by multiplying it by its corresponding adjoint mode. The wavemaker shows that this instability is most sensitive to changes in the base flow slightly downstream of the nozzle exit. By modifying the base flow in this region, we then demonstrate that the flow can indeed be stabilized. This explains the success of microjets as an effective noise control measure when they are positioned around the nozzle lip. Computational resources were provided by the Argonne Leadership Computing Facility.

A Global Upper-Mantle Tomographic Model of Shear Attenuation

NASA Astrophysics Data System (ADS)

Karaoglu, H.; Romanowicz, B. A.

2016-12-01

Mapping anelastic 3D structure within the earth's mantle is key to understanding present day mantle dynamics, as it provides complementary constraints to those obtained from elastic structure, with the potential to distinguish between thermal and compositional heterogeneity. For this, we need to measure seismic wave amplitudes, which are sensitive to both elastic (through focusing and scattering) and anelastic structure. The elastic effects are less pronounced at long periods, so previous global upper-mantle attenuation models are based on teleseismic surface wave data, sometimes including overtones. In these studies, elastic effects are considered either indirectly, by eliminating data strongly contaminated by them (e.g. Romanowicz, 1995; Gung and Romanowicz, 2004), or by correcting for elastic focusing effects using an approximate linear approach (Dalton et al., 2008). Additionally, in these studies, the elastic structure is held fixed when inverting for intrinsic attenuation . The importance of (1) having a good starting elastic model, (2) accurate modeling of the seismic wavefield and (3) joint inversion for elastic and anelastic structure, becomes more evident as the targeted resolution level increases. Also, velocity dispersion effects due to anelasticity need to be taken into account. Here, we employ a hybrid full waveform inversion method, inverting jointly for global elastic and anelastic upper mantle structure, starting from the latest global 3D shear velocity model built by our group (French and Romanowicz, 2014), using the spectral element method for the forward waveform modeling (Capdeville et al., 2003), and normal-mode perturbation theory (NACT - Li and Romanowicz, 1995) for kernel computations. We present a 3D upper-mantle anelastic model built by using three component fundamental and overtone surface waveforms down to 60 s as well as long period body waveforms down to 30 s. We also include source and site effects to first order as frequency independent scalar factors. The robustness of the inversion method is assessed through synthetic and resolution tests. We discuss salient features of the resulting anelastic model and in particular the well-resolved strong correlation with tectonics observed in the first 200 km of the mantle.

Interannual Variability, Global Teleconnection, and Potential Predictability Associated with the Asian Summer Monsoon

NASA Technical Reports Server (NTRS)

Lau, K. M.; Kim, K. M.; Li, J. Y.

2001-01-01

In this Chapter, aspects of global teleconnections associated with the interannual variability of the Asian summer monsoon (ASM) are discussed. The basic differences in the basic dynamics of the South Asian Monsoon and the East Asian monsoon, and their implications on global linkages are discussed. Two teleconnection modes linking ASM variability to summertime precipitation over the continental North America were identified. These modes link regional circulation and precipitation anomalies over East Asia and continental North America, via coupled atmosphere-ocean variations over the North Pacific. The first mode has a large zonally symmetrical component and appears to be associated with subtropical jetstream variability and the second mode with Rossby wave dispersion. Both modes possess strong sea surface temperature (SST) expressions in the North Pacific. Results show that the two teleconnection modes may have its origin in intrinsic modes of sea surface temperature variability in the extratropical oceans, which are forced in part by atmospheric variability and in part by air-sea interaction. The potential predictability of the ASM associated with SST variability in different ocean basins is explored using a new canonical ensemble correlation prediction scheme. It is found that SST anomalies in tropical Pacific, i.e., El Nino, is the most dominant forcing for the ASM, especially over the maritime continent and eastern Australia. SST anomalies in the India Ocean may trump the influence from El Nino in western Australia and western maritime continent. Both El Nino, and North Pacific SSTs contribute to monsoon precipitation anomalies over Japan, southern Korea, northern and central China. By optimizing SST variability signals from the world ocean basins using CEC, the overall predictability of ASM can be substantially improved.

Lorentzian Goldstone modes shared among photons and gravitons

NASA Astrophysics Data System (ADS)

Chkareuli, J. L.; Jejelava, J.; Kepuladze, Z.

2018-02-01

It has long been known that photons and gravitons may appear as vector and tensor Goldstone modes caused by spontaneous Lorentz invariance violation (SLIV). Usually this approach is considered for photons and gravitons separately. We develop the emergent electrogravity theory consisting of the ordinary QED and the tensor-field gravity model which mimics the linearized general relativity in Minkowski spacetime. In this theory, Lorentz symmetry appears incorporated into higher global symmetries of the length-fixing constraints put on the vector and tensor fields involved, A_{μ }2=± MA2 and H_{μ ν }2=± MH2 (MA and MH are the proposed symmetry breaking scales). We show that such a SLIV pattern being related to breaking of global symmetries underlying these constraints induces the massless Goldstone and pseudo-Goldstone modes shared by photon and graviton. While for a vector field case the symmetry of the constraint coincides with Lorentz symmetry SO(1, 3) of the electrogravity Lagrangian, the tensor-field constraint itself possesses much higher global symmetry SO(7, 3), whose spontaneous violation provides a sufficient number of zero modes collected in a graviton. Accordingly, while the photon may only contain true Goldstone modes, the graviton appears at least partially to be composed of pseudo-Goldstone modes rather than of pure Goldstone ones. When expressed in terms of these modes, the theory looks essentially nonlinear and contains a variety of Lorentz and CPT violating couplings. However, all SLIV effects turn out to be strictly cancelled in the lowest order processes considered in some detail. How this emergent electrogravity theory could be observationally different from conventional QED and GR theories is also briefly discussed.

Structural modeling and optimization of a joined-wing configuration of a High-Altitude Long-Endurance (HALE) aircraft

NASA Astrophysics Data System (ADS)

Kaloyanova, Valentina B.

Recent research trends have indicated an interest in High-Altitude, Long-Endurance (HALE) aircraft as a low-cost alternative to certain space missions, such as telecommunication relay, environmental sensing and military reconnaissance. HALE missions require a light vehicle flying at low speed in the stratosphere at altitudes of 60,000-80,000 ft, with a continuous loiter time of up to several days. To provide high lift and low drag at these high altitudes, where the air density is low, the wing area should be increased, i.e., high-aspect-ratio wings are necessary. Due to its large span and lightweight, the wing structure is very flexible. To reduce the structural deformation, and increase the total lift in a long-spanned wing, a sensorcraft model with a joined-wing configuration, proposed by AFRL, is employed. The joined-wing encompasses a forward wing, which is swept back with a positive dihedral angle, and connected with an aft wing, which is swept forward. The joined-wing design combines structural strength, high aerodynamic performance and efficiency. As a first step to study the joined-wing structural behavior an 1-D approximation model is developed. The 1-D approximation is a simple structural model created using ANSYS BEAM4 elements to present a possible approach for the aerodynamics-structure coupling. The pressure loads from the aerodynamic analysis are integrated numerically to obtain the resultant aerodynamic forces and moments (spanwise lift and pitching moment distributions, acting at the aerodynamic center). These are applied on the 1-D structural model. A linear static analysis is performed under this equivalent load, and the deformed shape of the 1-D model is used to obtain the deformed shape of the actual 3-D joined wing, i.e. deformed aerodynamic surface grid. To date in the existing studies, only simplified structural models have been examined. In the present work, in addition to the simple 1-D beam model, a semi-monocoque structural model is developed. All stringers, skin panels, ribs and spars are represented by appropriate elements in a finite-element model. Also, the model accounts for the fuel weight and sensorcraft antennae housed within the wings. Linear and nonlinear static analyses under the aerodynamic load are performed. The stress distribution in the wing as well as deformation is explored. Starting with a structural model with uniform mass distribution, a design optimization is performed to achieve a fully stressed design. As the joined-wing structure is prone to buckling, after the design optimization is complete linear and nonlinear bucking analyses are performed to study the global joined-wing structural instability, the load magnitude at which it is expected to occur, and the buckling mode. The buckled shape of the aft wing (which is subjected to compression) is found to resemble that of a fixed-pinned column. The linear buckling analysis overestimates the buckling load. However, even the nonlinear buckling analysis results in a load factor higher than 3, i.e. the wing structure is buckling safe under its current loading conditions. As the region of the joint has a very complicated geometry that has adverse effects in the flow and stress behavior an independent, more finely meshed model (submodel) of the joint region is generated and analyzed. A detailed discussion of the stress distribution obtained in the joint region via the submodeling technique is presented in this study as well. It is found out that compared to its structural response, the joint adverse effects are much more pronounced in its aerodynamic response, so it is suggested for future studies the geometry of the joint to be optimized based on its aerodynamic performance. As this design and analysis study is aimed towards developing a realistic structural representation of the innovative joined-wing configuration, in addition to the "global", or upper-level optimization, a local level design optimization is performed as well. At the lower (local) level detailed models of wing structural panels are used to compute more complex failure modes and to design the details that are not included in the upper (global) level model. Proper coordination between local skin-stringer panel models and the global joined-wing model prevents inconsistency between the upper- (global) and lower- (local) level design models. (Abstract shortened by UMI.)

A Review of Intensive Mode of Delivery and Science Subjects in Australian Universities

ERIC Educational Resources Information Center

Harvey, Marina; Power, Michelle; Wilson, Michael

2017-01-01

One response to the global trend of increasing rates of student participation in tertiary education has been for universities to increase the number of intensive mode of delivery subjects available. This phenomenon extends to science subjects. Embarking on offering an undergraduate science subject in intensive mode for the first time at the…

Global and Local Helioseismic Studies of Solar Convection Zone Dynamics Using SOI-MDI on SOHO

NASA Technical Reports Server (NTRS)

Toomre, Juri; Haber, Deborah; Hindman, Bradley; Christensen-Dalsgaard, Joergen; Gough, Douglas; Thompson, Michael

2003-01-01

Our joint collaborative analyses of global mode data to characterize the solar differential rotation (e.g. Thompson et al. 1996, Schou et al. 1998), and most recently to detect and analyze temporal variations in angular velocity Omega profiles both within the convection zone and in the deeper radiative interior (e.g. Howe et al 2000a,b; Toomre et al. 2000), have led to a series of fascinating discoveries. These should be pursued further as the solar cycle continues. The physical deductions being made from these studies have been greatly strengthened by utilizing both SOI-MDI and GONG data in order to have two independent observational realizations of Doppler images spanning a five-year interval, using two separate procedures to determine global mode splittings, and then analyzing those splitting data sets using both RLS and SOLA inversion procedures. There are considerable subtleties in the effects of instrumental response functions and calibrations, sensitivity of peak finding algorithms and their mode leakage estimates, and stochastic variations in mode amplitudes that can all contribute to apparent changes in the Omega profiles being inferred from sequences of helioseismic data. We have come to understand the implications of many of these calibration and analysis steps, greatly aided by frequent multi-week collaborative working sessions in our Helioseismic Analysis Facility (HAF) at JILA involving many members of the SO1 dynamics and inversion team, including most of our Co-Is during the summer months when we hold intensive working sessions. Considerable further focused attention is required in a collaborative setting on such global mode issues as we continue studying the changing sun.

SDSS IV MaNGA: the global and local stellar mass assemby histories of galaxies

NASA Astrophysics Data System (ADS)

Ibarra-Medel, Héctor J.; Sánchez, Sebastián F.; Avila-Reese, Vladimir; Hernández-Toledo, Héctor M.; González, J. Jesús; Drory, Niv; Bundy, Kevin; Bizyaev, Dmitry; Cano-Díaz, Mariana; Malanushenko, Elena; Pan, Kaike; Roman-Lopes, Alexandre; Thomas, Daniel

2016-12-01

Using the fossil record method implemented through Pipe3D, we reconstruct the global and radial stellar mass growth histories (MGHs) of a large sample of galaxies, ranging from dwarf to giant objects, from the Mapping Nearby Galaxies at the Apache Point Observatory (MaNGA) survey. We confirm that the main driver of the global MGHs is mass, with more massive galaxies assembling earlier (downsizing), though for a given mass, the global MGHs segregate by colour, specific star formation rate and morphological type. From the inferred radial mean MGHs, we find that at fractions of assembled mass larger than ˜80 per cent, the innermost regions formed stars, on average, in the inside-out mode. At earlier epochs, when the age estimation of the method becomes poor, the MGHs seem to be spatially homogeneous or even in the outside-in mode, especially for the red/quiescent/early-type galaxies. The innermost MGHs are, in general, less scattered around the mean than the outermost MGHs. For dwarf and low-mass galaxies, we do not find evidence of an outside-in formation mode; instead, their radial MGHs are very diverse most of the time, with periods of outside-in and inside-out modes (or strong radial migration), suggesting this is an episodic star formation history. Blue/star-forming/late-type galaxies present, on average, a significantly more pronounced inside-out formation mode than red/quiescent/early-type galaxies, independently of mass. We discuss our results in the light of the processes of galaxy formation, quenching and radial migration. We also discuss the uncertainties and biases of the fossil record method and how these could affect our results.

Methods and techniques in helioseismology

NASA Astrophysics Data System (ADS)

Cortés, Teodoro Roca

In the last two decades, the study of global solar oscillations has provided the only effective method to probe the structure of stars, and particularly that of our Sun. As will be seen throughout this short course, we now know the Sun much better than before thanks to Helioseismology. However, the detection of such normal modes of vibration of the Sun has only been possible recently due to the combination of two factors: first the signals to measure, although almost periodic, have very small amplitudes as compared to noise, and second, instrumental and observing techniques have not reached the required sensitivity until now.

Mode, load, and specific climate impact from passenger trips.

PubMed

Borken-Kleefeld, Jens; Fuglestvedt, Jan; Berntsen, Terje

2013-07-16

The climate impact from a long-distance trip can easily vary by a factor of 10 per passenger depending on mode choice, vehicle efficiency, and occupancy. In this paper we compare the specific climate impact of long-distance car travel with coach, train, or air trips. We account for both, CO2 emissions and short-lived climate forcers. This particularly affects the ranking of aircraft's climate impact relative to other modes. We calculate the specific impact for the Global Warming Potential and the Global Temperature Change Potential, considering time horizons between 20 and 100 years, and compare with results accounting only for CO2 emissions. The car's fuel efficiency and occupancy are central whether the impact from a trip is as high as from air travel or as low as from train travel. These results can be used for carbon-offsetting schemes, mode choice and transportation planning for climate mitigation.

Neocortical dynamics due to axon propagation delays in cortico-cortical fibers: EEG traveling and standing waves with implications for top-down influences on local networks and white matter disease

PubMed Central

Nunez, Paul L.; Srinivasan, Ramesh

2013-01-01

The brain is treated as a nested hierarchical complex system with substantial interactions across spatial scales. Local networks are pictured as embedded within global fields of synaptic action and action potentials. Global fields may act top-down on multiple networks, acting to bind remote networks. Because of scale-dependent properties, experimental electrophysiology requires both local and global models that match observational scales. Multiple local alpha rhythms are embedded in a global alpha rhythm. Global models are outlined in which cm-scale dynamic behaviors result largely from propagation delays in cortico-cortical axons and cortical background excitation level, controlled by neuromodulators on long time scales. The idealized global models ignore the bottom-up influences of local networks on global fields so as to employ relatively simple mathematics. The resulting models are transparently related to several EEG and steady state visually evoked potentials correlated with cognitive states, including estimates of neocortical coherence structure, traveling waves, and standing waves. The global models suggest that global oscillatory behavior of self-sustained (limit-cycle) modes lower than about 20 Hz may easily occur in neocortical/white matter systems provided: Background cortical excitability is sufficiently high; the strength of long cortico-cortical axon systems is sufficiently high; and the bottom-up influence of local networks on the global dynamic field is sufficiently weak. The global models provide "entry points" to more detailed studies of global top-down influences, including binding of weakly connected networks, modulation of gamma oscillations by theta or alpha rhythms, and the effects of white matter deficits. PMID:24505628

Language Learning Motivation, Global English and Study Modes: A Comparative Study

ERIC Educational Resources Information Center

Lanvers, Ursula

2017-01-01

Exploring the popular explanation that the global spread of English may demotivate students with English as their first language to learn other languages, this study investigates relations between student motivation and perception of Global English and tests for differences between traditional "campus" and distance university students…

Learner Analysis Framework for Globalized E-Learning: A Case Study

ERIC Educational Resources Information Center

Saxena, Mamta

2011-01-01

The shift to technology-mediated modes of instructional delivery and increased global connectivity has led to the rise in globalized e-learning programs. Educational institutions face multiple challenges as they seek to design effective, engaging, and culturally competent instruction for an increasingly diverse learner population. The purpose of…

Climate-change impact on the 20th-century relationship between the Southern Annular Mode and global mean temperature

PubMed Central

Wang, Guojian; Cai, Wenju

2013-01-01

The positive phase of the El Niño-Southern Oscillation (ENSO) increases global mean temperature, and contributes to a negative phase of the Southern Annular Mode (SAM), the dominant mode of climate variability in the Southern Hemisphere. This interannual relationship of a high global mean temperature associated with a negative SAM, however, is opposite to the relationship between their trends under greenhouse warming. We show that over much of the 20th century this relationship undergoes multidecadal fluctuations depending on the intensity of ENSO. During the period 1925–1955, subdued ENSO activities weakened the relationship. However, a similar weakening has occurred since the late 1970s despite the strong ENSO. We demonstrate that this recent weakening is induced by climate change in the Southern Hemisphere. Our result highlights a rare situation in which climate change signals emerge against an opposing property of interannual variability, underscoring the robustness of the recent climate change. PMID:23784087

Adaptive and nonadaptive feedback control of global instabilities with application to a heated 2-D jet

NASA Astrophysics Data System (ADS)

Monkewitz, Peter A.; Mingori, D. L.

1992-04-01

Close to the onset of self-excited fluid oscillations the generic complex Ginzburg-Landau is proposed as the lowest order model for the plant. Its linear part which provides the stability boundaries is derived from first principles for both doubly-infinite and semi-infinite flow domains. Concentrating on a single global mode, the model is further simplified to the Stuart-Landau equation. For this latter model, a methodology is developed for the design of single-input single-output controllers. The so designed controllers have been implemented on a self-excited, heated two-dimensional jet with one hot wire as sensor and an acoustic speaker as actuator, and are shown to be effective within their limitations in suppressing or enhancing limit-cycle oscillations. Finally, the effect of of a controller designed to suppress the most unstable global mode on other modes is investigated experimentally in the wake of a cylinder at low Reynolds number, where an encouraging semi-quantitative correspondence to the Ginzburg-Landau model is found.

Mode cross coupling observations with a rotation sensor

NASA Astrophysics Data System (ADS)

Nader-Nieto, M. F.; Igel, H.; Ferreira, A. M.; Al-Attar, D.

2013-12-01

The Earth's free oscillations induced by large earthquakes have been one of the most important ways to measure the Earth's internal structure and processes. They provide important large scale constraints on a variety of elastic parameters, attenuation and density of the Earth's deep interior. The potential of rotational seismic records for long period seismology was proven useful as a complement to traditional measurements in the study of the Earth's free oscillations. Thanks to the high resolution of the G-ring laser located at Geodetic Observatory Wettzell, Germany, we are now able to study the spectral energy generated by rotations in the low frequency range. On a SNREI Earth, a vertical component rotational sensor is primarily excited by horizontally polarised shear motions (SH waves, Love waves) with theoretically no sensitivity to compressional waves and conversions (P-SV) and Rayleigh waves. Consequently, in the context of the Earth's normal modes, this instrument detects mostly toroidal modes. Here, we present observations of spectral energy of both toroidal and spheroidal normal modes in the G-ring Laser records of one of the largest magnitude events recently recorded: Tohoku-Oki, Japan, 2011. In an attempt to determine the mechanisms responsible for spheroidal energy in the vertical axes rotational spectra, we first rule out instrumental effects as well as the effect of local heterogeneity. Second, we carry out a simulation of an ideal rotational sensor taking into account the effects of the Earth's daily rotation, its hydrostatic ellipticity and structural heterogeneity, finding a good fit to the data. Simulations considering each effect separately are performed in order to evaluate the sensitivity of rotational motions to global effects with respect to traditional translation measurements.

A Solar Model with g-Modes

NASA Technical Reports Server (NTRS)

Wolff, Charles L.; Niemann, Hasso (Technical Monitor)

2002-01-01

Good evidence is assembled showing that the Suit's core arid surface vary on time scales from a month to a decade arid that a number of scales are similar. The most plausible source for numerous long time scales and periodicities is long-lived global oscillations. This suggests g-modes (oscillations restored mainly by buoyancy) because they particularly affect the core and base of the convective envelope, which then indirectly modulates the surface. Also, standing g-modes have rotational properties that match many observed periodicities. But the standard solar model (SSM) has a static core and excites few if any g-modes. making new interior structures worth exploring. The model outlined here assumes two well mixed shells near 0.18 and 0.68 R, (13 = solar radius) where sound speed data shows sharp deviations from the SSM. Mixing is sustained by flows driven by the oscillations. The shells form a cavity that excludes g-modes from their main damping region below 0.1 R, assisting their net excitation and increasing their oscillation periods by at least a factor of two and probably much more. In terms of the solar luminosity L, the modes transport up through the cavity a power approx. 0.004 L as a lower limit and 0.11 L as all upper limit. The modes dissipate energy in the outer shell and cool the inner shell, asymmetrically in each case, and this stimulates occasional convective events whose response time is typically 0.8 years longer near the inner shell. Such events cool the core and reduce neutrino flux while heating the envelope and increasing solar activity. This gives a physical basis for a well mixed Sun with low neutrino flux and basis for the observed anticorrelation and lag of neutrino behind surface activity.

Enzyme-assisted supercritical carbon dioxide extraction of black pepper oleoresin for enhanced yield of piperine-rich extract.

PubMed

Dutta, Sayantani; Bhattacharjee, Paramita

2015-07-01

Black pepper (Piper nigrum L.), the King of Spices is the most popular spice globally and its active ingredient, piperine, is reportedly known for its therapeutic potency. In this work, enzyme-assisted supercritical carbon dioxide (SC-CO2) extraction of black pepper oleoresin was investigated using α-amylase (from Bacillus licheniformis) for enhanced yield of piperine-rich extract possessing good combination of phytochemical properties. Optimization of the extraction parameters (without enzyme), mainly temperature and pressure, was conducted in both batch and continuous modes and the optimized conditions that provided the maximum yield of piperine was in the batch mode, with a sample size of 20 g of black pepper powder (particle diameter 0.42 ± 0.02 mm) at 60 °C and 300 bar at 2 L/min of CO2 flow. Studies on activity of α-amylase were conducted under these optimized conditions in both batch and continuous modes, with varying amounts of lyophilized enzyme (2 mg, 5 mg and 10 mg) and time of exposure of the enzyme to SC-CO2 (2.25 h and 4.25 h). The specific activity of the enzyme increased by 2.13 times when treated in the continuous mode than in the batch mode (1.25 times increase). The structural changes of the treated enzymes were studied by (1)H NMR analyses. In case of α-amylase assisted extractions of black pepper, both batch and continuous modes significantly increased the yields and phytochemical properties of piperine-rich extracts; with higher increase in batch mode than in continuous. Copyright © 2014 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

A model for distribution centers location-routing problem on a multimodal transportation network with a meta-heuristic solving approach

NASA Astrophysics Data System (ADS)

Fazayeli, Saeed; Eydi, Alireza; Kamalabadi, Isa Nakhai

2017-07-01

Nowadays, organizations have to compete with different competitors in regional, national and international levels, so they have to improve their competition capabilities to survive against competitors. Undertaking activities on a global scale requires a proper distribution system which could take advantages of different transportation modes. Accordingly, the present paper addresses a location-routing problem on multimodal transportation network. The introduced problem follows four objectives simultaneously which form main contribution of the paper; determining multimodal routes between supplier and distribution centers, locating mode changing facilities, locating distribution centers, and determining product delivery tours from the distribution centers to retailers. An integer linear programming is presented for the problem, and a genetic algorithm with a new chromosome structure proposed to solve the problem. Proposed chromosome structure consists of two different parts for multimodal transportation and location-routing parts of the model. Based on published data in the literature, two numerical cases with different sizes generated and solved. Also, different cost scenarios designed to better analyze model and algorithm performance. Results show that algorithm can effectively solve large-size problems within a reasonable time which GAMS software failed to reach an optimal solution even within much longer times.

Waveform inversion of mantle Love waves: The born seismogram approach

NASA Technical Reports Server (NTRS)

Tanimoto, T.

1983-01-01

Normal mode theory, extended to the slightly laterally heterogeneous Earth by the first-order Born approximation, is applied to the waveform inversion of mantle Love waves (200-500 sec) for the Earth's lateral heterogeneity at l=2 and a spherically symmetric anelasticity (Q sub mu) structure. The data are from the Global Digital Seismograph Network (GDSN). The l=2 pattern is very similar to the results of other studies that used either different methods, such as phase velocity measurements and multiplet location measurements, or a different data set, such as mantle Rayleigh waves from different instruments. The results are carefully analyzed for variance reduction and are most naturally explained by heterogeneity in the upper 420 km. Because of the poor resolution of the data set for the deep interior, however, a fairly large heterogeneity in the transition zones, of the order of up to 3.5% in shear wave velocity, is allowed. It is noteworthy that Love waves of this period range can not constrain the structure below 420 km and thus any model presented by similar studies below this depth are likely to be constrained by Rayleigh waves (spheroidal modes) only.

Waveform inversion of mantle Love waves - The Born seismogram approach

NASA Technical Reports Server (NTRS)

Tanimoto, T.

1984-01-01

Normal mode theory, extended to the slightly laterally heterogeneous earth by the first-order Born approximation, is applied to the waveform inversion of mantle Love waves (200-500 sec) for the earth's lateral heterogeneity at l = 2 and a spherically symmetric anelasticity (Q sub mu) structure. The data are from the Global Digital Seismograph Network (GDSN). The l = 2 pattern is very similar to the results of other studies that used either different methods, such as phase velocity measurements and multiplet location measurements, or a different data set, such as mantle Rayleigh waves from different instruments. The results are carefully analyzed for variance reduction and are most naturally explained by heterogeneity in the upper 420 km. Because of the poor resolution of the data set for the deep interior, however, a fairly large heterogeneity in the transition zones, of the order of up to 3.5 percent in shear wave velocity, is allowed. It is noteworthy that Love waves of this period range can not constrain the structure below 420 km and thus any model presented by similar studies below this depth are likely to be constrained by Rayleigh waves (spheroidal modes) only.

A model for distribution centers location-routing problem on a multimodal transportation network with a meta-heuristic solving approach

NASA Astrophysics Data System (ADS)

Fazayeli, Saeed; Eydi, Alireza; Kamalabadi, Isa Nakhai

2018-07-01

Nowadays, organizations have to compete with different competitors in regional, national and international levels, so they have to improve their competition capabilities to survive against competitors. Undertaking activities on a global scale requires a proper distribution system which could take advantages of different transportation modes. Accordingly, the present paper addresses a location-routing problem on multimodal transportation network. The introduced problem follows four objectives simultaneously which form main contribution of the paper; determining multimodal routes between supplier and distribution centers, locating mode changing facilities, locating distribution centers, and determining product delivery tours from the distribution centers to retailers. An integer linear programming is presented for the problem, and a genetic algorithm with a new chromosome structure proposed to solve the problem. Proposed chromosome structure consists of two different parts for multimodal transportation and location-routing parts of the model. Based on published data in the literature, two numerical cases with different sizes generated and solved. Also, different cost scenarios designed to better analyze model and algorithm performance. Results show that algorithm can effectively solve large-size problems within a reasonable time which GAMS software failed to reach an optimal solution even within much longer times.

First-principles study of alloying effects on fluorine incorporation in Al x Ga1-x N alloys

NASA Astrophysics Data System (ADS)

Wang, Rong; Tan, Wei; Zhang, Jian; Chen, Feng-Xiang; Wei, Su-Huai

2018-02-01

Incorporation of fluorine (F) into the AlGaN layer is crucial to the fabrication of enhancement-mode (E-mode) AlGaN/GaN high electron mobility transistors (HEMTs). However, the understanding of properties of F doping in AlGaN alloys is rather limited. Using first-principles calculations and the special quasirandom structure (SQS) approach, we investigate the alloying effects on the doping properties of F-incorporated Al x Ga1-x N alloys. We find that substitutional F on N sites (FN) and interstitial F (Fi) are dominant defects for F in Al x Ga1-x N alloys. For these two types of defects, both the global composition x and the local motif surrounding the dopant play important roles. On contrary, the incorporation of substitutional F on Ga sites (FGa) or Al sites (FAl) are affected only by the composition x. We also find that there exists a large asymmetric bowing for the effective formation energies of FN and Fi. These results are explained in terms of local structural distortion and electronic effects. The mechanism discussed in this paper can also be used in understanding doping in other semiconductor alloys.

Generalization of soft phonon modes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rudin, Sven P.

Soft phonon modes describe a collective movement of atoms that transform a higher-symmetry crystal structure into a lower-symmetry crystal structure. Such structural transformations occur at finite temperatures, where the phonons (i.e., the low-temperature vibrational modes) and the static perfect crystal structures provide an incomplete picture of the dynamics. In this paper, principal vibrational modes (PVMs) are introduced as descriptors of the dynamics of a material system withmore » $N$ atoms. The PVMs represent the independent collective movements of the atoms at a given temperature. Molecular dynamics (MD) simulations, here in the form of quantum MD using density functional theory calculations, provide both the data describing the atomic motion and the data used to construct the PVMs. The leading mode, $${\\mathrm{PVM}}_{0}$$, represents the $3N$-dimensional direction in which the system moves with greatest amplitude. For structural phase transitions, $${\\mathrm{PVM}}_{0}$$ serves as a generalization of soft phonon modes. At low temperatures, $${\\mathrm{PVM}}_{0}$$ reproduces the soft phonon mode in systems where one phonon dominates the phase transformation. In general, multiple phonon modes combine to describe a transformation, in which case $${\\mathrm{PVM}}_{0}$$ culls these phonon modes. Moreover, while soft phonon modes arise in the higher-symmetry crystal structure, $${\\mathrm{PVM}}_{0}$$ can be equally well calculated on either side of the structural phase transition. Finally, two applications demonstrate these properties: first, transitions into and out of bcc titanium, and, second, the two crystal structures proposed for the $${\\beta}$$ phase of uranium, the higher-symmetry structure of which stabilizes with temperature.« less

Generalization of soft phonon modes

DOE PAGES

Rudin, Sven P.

2018-04-27

Soft phonon modes describe a collective movement of atoms that transform a higher-symmetry crystal structure into a lower-symmetry crystal structure. Such structural transformations occur at finite temperatures, where the phonons (i.e., the low-temperature vibrational modes) and the static perfect crystal structures provide an incomplete picture of the dynamics. In this paper, principal vibrational modes (PVMs) are introduced as descriptors of the dynamics of a material system withmore » $N$ atoms. The PVMs represent the independent collective movements of the atoms at a given temperature. Molecular dynamics (MD) simulations, here in the form of quantum MD using density functional theory calculations, provide both the data describing the atomic motion and the data used to construct the PVMs. The leading mode, $${\\mathrm{PVM}}_{0}$$, represents the $3N$-dimensional direction in which the system moves with greatest amplitude. For structural phase transitions, $${\\mathrm{PVM}}_{0}$$ serves as a generalization of soft phonon modes. At low temperatures, $${\\mathrm{PVM}}_{0}$$ reproduces the soft phonon mode in systems where one phonon dominates the phase transformation. In general, multiple phonon modes combine to describe a transformation, in which case $${\\mathrm{PVM}}_{0}$$ culls these phonon modes. Moreover, while soft phonon modes arise in the higher-symmetry crystal structure, $${\\mathrm{PVM}}_{0}$$ can be equally well calculated on either side of the structural phase transition. Finally, two applications demonstrate these properties: first, transitions into and out of bcc titanium, and, second, the two crystal structures proposed for the $${\\beta}$$ phase of uranium, the higher-symmetry structure of which stabilizes with temperature.« less

Application of firefly algorithm to the dynamic model updating problem

NASA Astrophysics Data System (ADS)

Shabbir, Faisal; Omenzetter, Piotr

2015-04-01

Model updating can be considered as a branch of optimization problems in which calibration of the finite element (FE) model is undertaken by comparing the modal properties of the actual structure with these of the FE predictions. The attainment of a global solution in a multi dimensional search space is a challenging problem. The nature-inspired algorithms have gained increasing attention in the previous decade for solving such complex optimization problems. This study applies the novel Firefly Algorithm (FA), a global optimization search technique, to a dynamic model updating problem. This is to the authors' best knowledge the first time FA is applied to model updating. The working of FA is inspired by the flashing characteristics of fireflies. Each firefly represents a randomly generated solution which is assigned brightness according to the value of the objective function. The physical structure under consideration is a full scale cable stayed pedestrian bridge with composite bridge deck. Data from dynamic testing of the bridge was used to correlate and update the initial model by using FA. The algorithm aimed at minimizing the difference between the natural frequencies and mode shapes of the structure. The performance of the algorithm is analyzed in finding the optimal solution in a multi dimensional search space. The paper concludes with an investigation of the efficacy of the algorithm in obtaining a reference finite element model which correctly represents the as-built original structure.

FeRh ground state and martensitic transformation

NASA Astrophysics Data System (ADS)

Zarkevich, Nikolai A.; Johnson, Duane D.

2018-01-01

Cubic B 2 FeRh exhibits a metamagnetic transition [(111) antiferromagnet (AFM) to ferromagnet (FM)] around 353 K and remains structurally stable at higher temperatures. However, the calculated zero-Kelvin phonons of AFM FeRh exhibit imaginary modes at M points in the Brillouin zone, indicating a premartensitic instability, which is a precursor to a martensitic transformation at low temperatures. Combining electronic-structure calculations with ab initio molecular dynamics, conjugate gradient relaxation, and the solid-state nudged-elastic band methods, we predict that AFM B 2 FeRh becomes unstable at ambient pressure and transforms without a barrier to an AFM(111) orthorhombic (martensitic) ground state below 90 ±10 K . We also consider competing structures, in particular, a tetragonal AFM(100) phase that is not the global ground state, as proposed [Phys. Rev. B 94, 180407(R) (2016), 10.1103/PhysRevB.94.180407], but a constrained solution.

Structure-activity relations of 2-(methylthio)benzimidazole by FTIR, FT-Raman, NMR, DFT and conceptual DFT methods.

PubMed

Arjunan, V; Raj, Arushma; Ravindran, P; Mohan, S

2014-01-24

The vibrational fundamental modes of 2-(methylthio)benzimidazole (2MTBI) have been analysed by combining FTIR, FT-Raman and quantum chemical calculations. The structural parameters of the compound are determined from the optimised geometry by B3LYP with 6-31G(∗∗), 6-311++G(∗∗) and cc-pVTZ basis sets and giving energies, harmonic vibrational frequencies, depolarisation ratios, IR intensities and Raman activities. (1)H and (13)C NMR spectra have been analysed and (1)H and (13)C nuclear magnetic resonance chemical shifts are calculated using the gauge independent atomic orbital (GIAO) method. The structure-activity relationship of the compound is also investigated by conceptual DFT methods. The chemical reactivity and site selectivity of the molecule has been determined with the help of global and local reactivity descriptors. Copyright © 2013 Elsevier B.V. All rights reserved.

On the Past, Present, and Future of Eastern Boundary Upwelling Systems

NASA Astrophysics Data System (ADS)

Bograd, S. J.; Black, B.; Garcia-Reyes, M.; Rykaczewski, R. R.; Thompson, S. A.; Turley, B. D.; van der Sleen, P.; Sydeman, W. J.

2016-12-01

Coastal upwelling in Eastern Boundary Upwelling Systems (EBUS) drives high productivity and marine biodiversity and supports lucrative commercial fishing operations. Thus there is significant interest in understanding the mechanisms underlying variations in the upwelling process, its drivers, and potential changes relative to global warming. Here we review recent results from a combination of regional and global observations, reanalysis products, and climate model projections that describe variability in coastal upwelling in EBUS. Key findings include: (1) interannual variability in California Current upwelling occurs in two orthogonal seasonal modes: a winter/early spring mode dominated by interannual variability and a summer mode dominated by long-term increasing trend; (2) there is substantial coherence in year-to-year variability between this winter/spring upwelling mode and upper trophic level demographic processes, including fish growth rates (rockfish and salmon) and seabird phenology, breeding success and survival; (3) a meta-analysis of existing literature suggests consistency with the Bakun (1990) hypothesis that rising global greenhouse-gas concentrations would result in upwelling-favorable wind intensification; however, (4) an ensemble of coupled, global ocean-atmosphere models finds limited evidence for intensification of upwelling-favorable winds over the 21st century, although summertime winds near the poleward boundaries of climatalogical upwelling zones are projected to intensify. We will also review a new comparative research program between the California and Benguela Upwelling Systems, including efforts to understand patterns of change and variation between climate, upwelling, fish, and seabirds.

Influence of modes of metal transfer on grain structure and direction of grain growth in low nickel austenitic stainless steel weld metals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mukherjee, Manidipto; Saha, Saptarshi; Pal, Tapan Kumar, E-mail: tkpal.ju@gmail.com

2015-04-15

The present study elaborately discussed the effect of different modes of metal transfer (i.e., short circuit mode, spray mode and pulse mode) on grain structure and direction of grain growth in low nickel austenitic stainless steel weld metals. Electron backscattered diffraction (EBSD) analysis was used to study the grain growth direction and grain structure in weld metals. The changes in grain structure and grain growth direction were found to be essentially varied with the weld pool shape and acting forces induced by modes of metal transfer at a constant welding speed. Short circuit mode of metal transfer owing to highermore » Marangoni force (M{sub a}) and low electromagnetic force (R{sub m}) promotes the lower weld pool volume (Γ) and higher weld pool maximum radius (r{sub m}). Short circuit mode also shows curved and tapered columnar grain structures and the grain growth preferentially occurred in <001> direction. In contrast, spray mode of metal transfer increases the Γ and reduces the r{sub m} values due to very high R{sub m} and typically reveals straight and broad columnar grain structures with preferential growth direction in <111>. In the pulse mode of metal transfer relatively high M{sub a} and R{sub m} simultaneously increase the weld pool width and the primary penetration which might encourage relatively complex grain growth directions in the weld pool and cause a shift of major intensity from <001> to <111> direction. It can also be concluded that the fusion zone grain structure and direction of grain growth are solely dependent on modes of metal transfer and remain constant for a particular mode of metal transfer irrespective of filler wire used. - Highlights: • Welded joints of LNiASS were prepared by varying modes of metal transfer. • Weld pool shape, grain structure and grain growth direction were studied. • Short circuit mode shows curved and tapered grain growth in <001> direction. • Spray mode shows straight and broad columnar grain growth in <111> direction. • Pulse mode shows complex grain growth with a shift in growth direction.« less

Active control of sound radiation from a vibrating rectangular panel by sound sources and vibration inputs - An experimental comparison

NASA Technical Reports Server (NTRS)

Fuller, C. R.; Hansen, C. H.; Snyder, S. D.

1991-01-01

Active control of sound radiation from a rectangular panel by two different methods has been experimentally studied and compared. In the first method a single control force applied directly to the structure is used with a single error microphone located in the radiated acoustic field. Global attenuation of radiated sound was observed to occur by two main mechanisms. For 'on-resonance' excitation, the control force had the effect of increasing the total panel input impedance presented to the nosie source, thus reducing all radiated sound. For 'off-resonance' excitation, the control force tends not significantly to modify the panel total response amplitude but rather to restructure the relative phases of the modes leading to a more complex vibration pattern and a decrease in radiation efficiency. For acoustic control, the second method, the number of acoustic sources required for global reduction was seen to increase with panel modal order. The mechanism in this case was that the acoustic sources tended to create an inverse pressure distribution at the panel surface and thus 'unload' the panel by reducing the panel radiation impedance. In general, control by structural inputs appears more effective than control by acoustic sources for structurally radiated noise.

Phases of capitalism, welfare states, medical dominance, and health care in Ontario.

PubMed

Coburn, D

1999-01-01

There has been a lacuna in previous studies of medicine and health care of concepts or structures relating changes in health care with their contextualizing social structures. That is, there is a need to more adequately account for health care and social structure in terms of dynamic rather than static concepts. This article reports the application of a general schema outlining the transformation of capitalism through the phases of entrepreneurial, monopoly, and global capitalism, first presented by Ross and Trachte, to help understand both the changing role of medicine in Canada and the historical trajectory of the development of health insurance. These related events are shown to be partly reflective of the transformed class dynamic involved in a changing capitalist mode of production. The recent history of challenges to medicare in Canada as well as evidence of the declining power of medicine are both related directly and indirectly to the increased power of business and the decline in the relative autonomy of the state accompanying globalization. The application of the phases of capitalism sequence does roughly fit the Canadian instance although some modifications will be required to account for the specifics of the Canadian case. The schema also helps resolve two previously competing class arguments about the rise of health insurance in Canada.

Nonlinear self-sustained structures and fronts in spatially developing wake flows

NASA Astrophysics Data System (ADS)

Pier, Benoît; Huerre, Patrick

2001-05-01

A family of slowly spatially developing wakes with variable pressure gradient is numerically demonstrated to sustain a synchronized finite-amplitude vortex street tuned at a well-defined frequency. This oscillating state is shown to be described by a steep global mode exhibiting a sharp Dee Langer-type front at the streamwise station of marginal absolute instability. The front acts as a wavemaker which sends out nonlinear travelling waves in the downstream direction, the global frequency being imposed by the real absolute frequency prevailing at the front station. The nonlinear travelling waves are determined to be governed by the local nonlinear dispersion relation resulting from a temporal evolution problem on a local wake profile considered as parallel. Although the vortex street is fully nonlinear, its frequency is dictated by a purely linear marginal absolute instability criterion applied to the local linear dispersion relation.

Stimulation-Based Control of Dynamic Brain Networks

PubMed Central

Pasqualetti, Fabio; Gu, Shi; Cieslak, Matthew

2016-01-01

The ability to modulate brain states using targeted stimulation is increasingly being employed to treat neurological disorders and to enhance human performance. Despite the growing interest in brain stimulation as a form of neuromodulation, much remains unknown about the network-level impact of these focal perturbations. To study the system wide impact of regional stimulation, we employ a data-driven computational model of nonlinear brain dynamics to systematically explore the effects of targeted stimulation. Validating predictions from network control theory, we uncover the relationship between regional controllability and the focal versus global impact of stimulation, and we relate these findings to differences in the underlying network architecture. Finally, by mapping brain regions to cognitive systems, we observe that the default mode system imparts large global change despite being highly constrained by structural connectivity. This work forms an important step towards the development of personalized stimulation protocols for medical treatment or performance enhancement. PMID:27611328

Vibration mode shape recognition using image processing

NASA Astrophysics Data System (ADS)

Wang, Weizhuo; Mottershead, John E.; Mares, Cristinel

2009-10-01

Currently the most widely used method for comparing mode shapes from finite elements and experimental measurements is the modal assurance criterion (MAC), which can be interpreted as the cosine of the angle between the numerical and measured eigenvectors. However, the eigenvectors only contain the displacement of discrete coordinates, so that the MAC index carries no explicit information on shape features. New techniques, based upon the well-developed philosophies of image processing (IP) and pattern recognition (PR) are considered in this paper. The Zernike moment descriptor (ZMD), Fourier descriptor (FD), and wavelet descriptor (WD) are the most popular shape descriptors due to their outstanding properties in IP and PR. These include (1) for the ZMD-rotational invariance, expression and computing efficiency, ease of reconstruction and robustness to noise; (2) for the FD—separation of the global shape and shape-details by low and high frequency components, respectively, invariance under geometric transformation; (3) for the WD—multi-scale representation and local feature detection. Once a shape descriptor has been adopted, the comparison of mode shapes is transformed to a comparison of multidimensional shape feature vectors. Deterministic and statistical methods are presented. The deterministic problem of measuring the degree of similarity between two mode shapes (possibly one from a vibration test and the other from a finite element model) may be carried out using Pearson's correlation. Similar shape feature vectors may be arranged in clusters separated by Euclidian distances in the feature space. In the statistical analysis we are typically concerned with the classification of a test mode shape according to clusters of shape feature vectors obtained from a randomised finite element model. The dimension of the statistical problem may often be reduced by principal component analysis. Then, in addition to the Euclidian distance, the Mahalanobis distance, defining the separation of the test point from the cluster in terms of its standard deviation, becomes an important measure. Bayesian decision theory may be applied to formally minimise the risk of misclassification of the test shape feature vector. In this paper the ZMD is applied to the problem of mode shape recognition for a circular plate. Results show that the ZMD has considerable advantages over the traditional MAC index when identifying the cyclically symmetric mode shapes that occur in axisymmetric structures at identical frequencies. Mode shape recognition of rectangular plates is carried out by the FD. Also, the WD is applied to the problem of recognising the mode shapes in the thin and thick regions of a plate with different thicknesses. It shows the benefit of using the WD to identify mode-shapes having both local and global components. The comparison and classification of mode shapes using IP and PR provides a 'toolkit' to complement the conventional MAC approach. The selection of a particular shape descriptor and classification method will depend upon the problem in hand and the experience of the analyst.

Evolution of the bi-stable wake of a square-back automotive shape

NASA Astrophysics Data System (ADS)

Pavia, Giancarlo; Passmore, Martin; Sardu, Costantino

2018-01-01

Square-back shapes are popular in the automotive market for their high level of practicality. These geometries, however, are usually characterised by high drag and their wake dynamics present aspects, such as the coexistence of a long-time bi-stable behaviour and short-time global fluctuating modes that are not fully understood. In the present paper, the unsteady behaviour of the wake of a generic square-back car geometry is characterised with an emphasis on identifying the causal relationship between the different dynamic modes in the wake. The study is experimental, consisting of balance, pressure, and stereoscopic PIV measurements. Applying wavelet and cross-wavelet transforms to the balance data, a quasi-steady correlation is demonstrated between the forces and bi-stable modes. This is investigated by applying proper orthogonal decomposition to the pressure and velocity data sets and a new structure is proposed for each bi-stable state, consisting of a hairpin vortex that originates from one of the two model's vertical trailing edges and bends towards the opposite side as it merges into a single streamwise vortex downstream. The wake pumping motion is also identified and for the first time linked with the motion of the bi-stable vortical structure in the streamwise direction, resulting in out-of-phase pressure variations between the two vertical halves of the model base. A phase-averaged low-order model is also proposed that provides a comprehensive description of the mechanisms of the switch between the bi-stable states. It is demonstrated that, during the switch, the wake becomes laterally symmetric and, at this point, the level of interaction between the recirculating structures and the base reaches a minimum, yielding, for this geometry, a 7% reduction of the base drag compared to the time-averaged result.

Behavior of tunnel form buildings under quasi-static cyclic lateral loading

USGS Publications Warehouse

Yuksel, S.B.; Kalkan, E.

2007-01-01

In this paper, experimental investigations on the inelastic seismic behavior of tunnel form buildings (i.e., box-type or panel systems) are presented. Two four-story scaled building specimens were tested under quasi-static cyclic lateral loading in longitudinal and transverse directions. The experimental results and supplemental finite element simulations collectively indicate that lightly reinforced structural walls of tunnel form buildings may exhibit brittle flexural failure under seismic action. The global tension/compression couple triggers this failure mechanism by creating pure axial tension in outermost shear-walls. This type of failure takes place due to rupturing of longitudinal reinforcement without crushing of concrete, therefore is of particular interest in emphasizing the mode of failure that is not routinely considered during seismic design of shear-wall dominant structural systems.

Frustration in protein elastic network models

NASA Astrophysics Data System (ADS)

Lezon, Timothy; Bahar, Ivet

2010-03-01

Elastic network models (ENMs) are widely used for studying the equilibrium dynamics of proteins. The most common approach in ENM analysis is to adopt a uniform force constant or a non-specific distance dependent function to represent the force constant strength. Here we discuss the influence of sequence and structure in determining the effective force constants between residues in ENMs. Using a novel method based on entropy maximization, we optimize the force constants such that they exactly reporduce a subset of experimentally determined pair covariances for a set of proteins. We analyze the optimized force constants in terms of amino acid types, distances, contact order and secondary structure, and we demonstrate that including frustrated interactions in the ENM is essential for accurately reproducing the global modes in the middle of the frequency spectrum.

Study of Second Stability for Global ITG Modes in MHD-stable Equilibria

NASA Astrophysics Data System (ADS)

Fivaz, Mathieu; Sauter, Olivier; Appert, Kurt; Tran, Trach-Minh; Vaclavik, Jan

1997-11-01

We study finite pressure effects on the Ion Temperature Gradient (ITG) instabilities; these modes are stabilized when the magnetic field gradient is reversed at high β [1]. This second stability regime for ITG modes is studied in details with a global linear gyrokinetic Particle-In-Cell code which takes the full toroidal MHD equilibrium data from the equilibrium solver CHEASE [2]. Both the trapped-ion and the toroidal ITG regimes are explored. In contrast to second stability for MHD ballooning modes, low magnetic shear and high values of the safety factor do not facilitate strongly the access to the second-stable ITG regime. The consequences for anomalous ion heat transport in tokamaks are explored. We use the results to find optimized configurations that are stable to ideal MHD modes for both the long (kink) and short (ballooning) wavelengths and where the ITG modes are stable or have very low growth rates; such configurations might present very low level of anomalous transport. [1] M. Fivaz, T.M. Tran, K. Appert, J. Vaclavik and S. E. Parker, Phys. Rev. Lett. 78, 1997, p. 3471 [2] H. Lütjens, A. Bondeson and O. Sauter, Comput. Phys. Commun. 97, 1996, p. 219

The Hall-induced stability of gravitating fluids

NASA Astrophysics Data System (ADS)

Karmakar, P. K.; Goutam, H. P.

2018-05-01

We analyze the stability behavior of low-density partially ionized self-gravitating magnetized unbounded dusty plasma fluid in the presence of the Hall diffusion effects (HDEs) in the non-ideal magnetohydrodynamic (MHD) equilibrium framework. The effects of inhomogeneous self-gravity are methodically included in the basic model tapestry. Application of the Fourier plane-wave perturbative treatment decouples the structuration representative parameters into a linear generalized dispersion relation (sextic) in a judicious mean-fluid approximation. The dispersion analysis shows that the normal mode, termed as the gravito-magneto-acoustic (GMA) mode, is drastically modified due to the HDEs. This mode is highly dispersive, and driven unstable by the Hall current resulting from the symmetry-breaking of electrons and ions relative to the magnetic field. The mode feature, which is derived from a modified induction with the positive Hall, is against the ideal MHD. It is further demonstrated that the HDEs play stabilizing roles by supporting the cloud against gravitational collapse. Provided that the HDEs are concurrently switched off, the collapse occurs on the global spatial scale due to enhanced inward accretion of the gravitating dust constituents. It is seen explicitly that the enhanced dust-charge leads to stabilizing effects. Besides, the Hall-induced fluctuations, as propagatory wave modes, exhibit both normal and anomalous dispersions. The reliability checkup of the entailed results as diverse corollaries and special cases are illustratively discussed in the panoptic light of the earlier paradigmatic predictions available in the literature.

Modal Substructuring of Geometrically Nonlinear Finite Element Models with Interface Reduction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

Substructuring methods have been widely used in structural dynamics to divide large, complicated finite element models into smaller substructures. For linear systems, many methods have been developed to reduce the subcomponents down to a low order set of equations using a special set of component modes, and these are then assembled to approximate the dynamics of a large scale model. In this paper, a substructuring approach is developed for coupling geometrically nonlinear structures, where each subcomponent is drastically reduced to a low order set of nonlinear equations using a truncated set of fixedinterface and characteristic constraint modes. The method usedmore » to extract the coefficients of the nonlinear reduced order model (NLROM) is non-intrusive in that it does not require any modification to the commercial FEA code, but computes the NLROM from the results of several nonlinear static analyses. The NLROMs are then assembled to approximate the nonlinear differential equations of the global assembly. The method is demonstrated on the coupling of two geometrically nonlinear plates with simple supports at all edges. The plates are joined at a continuous interface through the rotational degrees-of-freedom (DOF), and the nonlinear normal modes (NNMs) of the assembled equations are computed to validate the models. The proposed substructuring approach reduces a 12,861 DOF nonlinear finite element model down to only 23 DOF, while still accurately reproducing the first three NNMs of the full order model.« less

Modal Substructuring of Geometrically Nonlinear Finite Element Models with Interface Reduction

DOE PAGES

Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

2017-03-29

Substructuring methods have been widely used in structural dynamics to divide large, complicated finite element models into smaller substructures. For linear systems, many methods have been developed to reduce the subcomponents down to a low order set of equations using a special set of component modes, and these are then assembled to approximate the dynamics of a large scale model. In this paper, a substructuring approach is developed for coupling geometrically nonlinear structures, where each subcomponent is drastically reduced to a low order set of nonlinear equations using a truncated set of fixedinterface and characteristic constraint modes. The method usedmore » to extract the coefficients of the nonlinear reduced order model (NLROM) is non-intrusive in that it does not require any modification to the commercial FEA code, but computes the NLROM from the results of several nonlinear static analyses. The NLROMs are then assembled to approximate the nonlinear differential equations of the global assembly. The method is demonstrated on the coupling of two geometrically nonlinear plates with simple supports at all edges. The plates are joined at a continuous interface through the rotational degrees-of-freedom (DOF), and the nonlinear normal modes (NNMs) of the assembled equations are computed to validate the models. The proposed substructuring approach reduces a 12,861 DOF nonlinear finite element model down to only 23 DOF, while still accurately reproducing the first three NNMs of the full order model.« less

The structure of galaxies : the division of stellar mass by morphological type and structural component

NASA Astrophysics Data System (ADS)

Kelvin, Lee Steven

This thesis explores the relation between galaxy structure, morphology and stellar mass. In the first part I present single-Sersic two-dimensional model fits to 167,600 galaxies modelled independently in the ugrizYJHK bandpasses using reprocessed Sloan Digital Sky Survey Data Release Seven (SDSS DR7) and UKIRT Infrared Deep Sky Survey Large Area Survey (UKIDSS LAS) imaging data available via the Galaxy and Mass Assembly (GAMA) data base. In order to facilitate this study, we developed Structural Investigation of Galaxies via Model Analysis (SIGMA): an automated wrapper around several contemporary astronomy software packages. We confirm that variations in global structural measurements with wavelength arise due to the effects of dust attenuation and stellar population/metallicity gradients within galaxies. In the second part of this thesis we establish a volume-limited sample of 3,845 galaxies in the local Universe and visually classify these galaxies according to their morphological Hubble type. We find that single-Sersic photometry accurately reproduces the morphology luminosity functions predicted in the literature. We employ multi-component Sersic profiling to provide bulge-disk decompositions for this sample, allowing for the luminosity and stellar mass to be divided between the key structural components: spheroids and disks. Grouping the stellar mass in these structures by the evolutionary mechanisms that formed them, we find that hot-mode collapse, merger or otherwise turbulent mechanisms account for ~46% of the total stellar mass budget, cold-mode gas accretion and splashback mechanisms account for ~48% of the total stellar mass budget and secular evolutionary processes for ~6.5% of the total stellar mass budget in the local (z<0.06) Universe.

Modal characterization of the ASCIE segmented optics testbed: New algorithms and experimental results

NASA Technical Reports Server (NTRS)

Carrier, Alain C.; Aubrun, Jean-Noel

1993-01-01

New frequency response measurement procedures, on-line modal tuning techniques, and off-line modal identification algorithms are developed and applied to the modal identification of the Advanced Structures/Controls Integrated Experiment (ASCIE), a generic segmented optics telescope test-bed representative of future complex space structures. The frequency response measurement procedure uses all the actuators simultaneously to excite the structure and all the sensors to measure the structural response so that all the transfer functions are measured simultaneously. Structural responses to sinusoidal excitations are measured and analyzed to calculate spectral responses. The spectral responses in turn are analyzed as the spectral data become available and, which is new, the results are used to maintain high quality measurements. Data acquisition, processing, and checking procedures are fully automated. As the acquisition of the frequency response progresses, an on-line algorithm keeps track of the actuator force distribution that maximizes the structural response to automatically tune to a structural mode when approaching a resonant frequency. This tuning is insensitive to delays, ill-conditioning, and nonproportional damping. Experimental results show that is useful for modal surveys even in high modal density regions. For thorough modeling, a constructive procedure is proposed to identify the dynamics of a complex system from its frequency response with the minimization of a least-squares cost function as a desirable objective. This procedure relies on off-line modal separation algorithms to extract modal information and on least-squares parameter subset optimization to combine the modal results and globally fit the modal parameters to the measured data. The modal separation algorithms resolved modal density of 5 modes/Hz in the ASCIE experiment. They promise to be useful in many challenging applications.

Inversion of Surface Wave Phase Velocities for Radial Anisotropy to an Depth of 1200 km

NASA Astrophysics Data System (ADS)

Xing, Z.; Beghein, C.; Yuan, K.

2012-12-01

This study aims to evaluate three dimensional radial anisotropy to an depth of 1200 km. Radial anisotropy describes the difference in velocity between horizontally polarized Rayleigh waves and vertically polarized Love waves. Its presence in the uppermost 200 km mantle has well been documented by different groups, and has been regarded as an indicator of mantle convection which aligns the intrinsically anisotropic minerals, largely olivine, to form large scale anisotropy. However, there is no global agreement on whether anisotropy exists in the region below 200 km. Recent models also associate a fast vertically polarized shear wave with vertical upwelling mantle flow. The data used in this study is the globally isotropic phase velocity models of fundamental and higher mode Love and Rayleigh waves (Visser, 2008). The inclusion of higher mode surface wave phase velocity provides sensitivities to structure at depth that extends to below the transition zone. While the data is the same as used by Visser (2008), a quite different parameterization is applied. All the six parameters - five elastic parameters A, C, F, L, N and density - are now regarded as independent, which rules out possible biased conclusions induced by scaling relation method used in several previous studies to reduce the number of parameters partly due to limited computing resources. The data need to be modified by crustal corrections (Crust2.0) as we want to look at the mantle structure only. We do this by eliminating the perturbation in surface wave phase velocity caused by the difference in crustal structure with respect to the referent model PREM. Sambridge's Neighborhood Algorithm is used to search the parameter space. The introduction of such a direct search technique pales the traditional inversion method, which requires regularization or some unnecessary priori restriction on the model space. On the contrary, the new method will search the full model space, providing probability density function of each anisotropic parameter and the corresponding resolution.

Heterogeneity and dynamics of the ligand recognition mode in purine-sensing riboswitches.

PubMed

Jain, Niyati; Zhao, Liang; Liu, John D; Xia, Tianbing

2010-05-04

High-resolution crystal structures and biophysical analyses of purine-sensing riboswitches have revealed that a network of hydrogen bonding interactions appear to be largey responsible for discrimination of cognate ligands against structurally related compounds. Here we report that by using femtosecond time-resolved fluorescence spectroscopy to capture the ultrafast decay dynamics of the 2-aminopurine base as the ligand, we have detected the presence of multiple conformations of the ligand within the binding pockets of one guanine-sensing and two adenine-sensing riboswitches. All three riboswitches have similar conformational distributions of the ligand-bound state. The known crystal structures represent the global minimum that accounts for 50-60% of the population, where there is no significant stacking interaction between the ligand and bases of the binding pocket, but the hydrogen-bonding cage collectively provides an electronic environment that promotes an ultrafast ( approximately 1 ps) charge transfer pathway. The ligand also samples multiple conformations in which it significantly stacks with either the adenine or the uracil bases of the A21-U75 and A52-U22 base pairs that form the ceiling and floor of the binding pocket, respectively, but favors the larger adenine bases. These alternative conformations with well-defined base stacking interactions are approximately 1-1.5 kcal/mol higher in DeltaG degrees than the global minimum and have distinct charge transfer dynamics within the picosecond to nanosecond time regime. Inside the pocket, the purine ligand undergoes dynamic motion on the low nanosecond time scale, sampling the multiple conformations based on time-resolved anisotropy decay dynamics. These results allowed a description of the energy landscape of the bound ligand with intricate details and demonstrated the elastic nature of the ligand recognition mode by the purine-sensing riboswitches, where there is a dynamic balance between hydrogen bonding and base stacking interactions, yielding the high affinity and specificity by the aptamer domain.

Magnetorotational instability in protoplanetary discs

NASA Astrophysics Data System (ADS)

Salmeron, Raquel; Wardle, Mark

2005-07-01

We investigate the linear growth and vertical structure of the magnetorotational instability (MRI) in weakly ionized, stratified accretion discs. The magnetic field is initially vertical and dust grains are assumed to have settled towards the mid-plane, so charges are carried by electrons and ions only. Solutions are obtained at representative radial locations from the central protostar for different choices of the initial magnetic field strength, sources of ionization, disc structure and configuration of the conductivity tensor. The MRI is active over a wide range of magnetic field strengths and fluid conditions in low-conductivity discs. Moreover, no evidence was found of a low-limit field strength below which unstable modes do not exist. For the minimum-mass solar nebula model, incorporating cosmic ray ionization, perturbations grow at 1 au for B<~ 8 G. For a significant subset of these strengths (200mG <~B<~ 5G), the maximum growth rate is of the order of the ideal magnetohydrodynamic (MHD) rate (0.75Ω). Hall conductivity modifies the structure and growth rate of global unstable modes at 1 au for all magnetic field strengths that support MRI. As a result, at this radius, modes obtained with a full conductivity tensor grow faster and are active over a more extended cross-section of the disc than perturbations in the ambipolar diffusion limit. For relatively strong fields (e.g. B>~ 200 mG), ambipolar diffusion alters the envelope shapes of the unstable modes, which peak at an intermediate height, instead of being mostly flat as modes in the Hall limit are in this region of parameter space. Similarly, when cosmic rays are assumed to be excluded from the disc by the winds emitted by the magnetically active protostar, unstable modes grow at this radius for B<~ 2 G. For strong fields, perturbations exhibit a kink at the height where X-ray ionization becomes active. Finally, for R= 5 au (10 au), unstable modes exist for B<~ 800 mG (B<~ 250 mG) and the maximum growth rate is close to the ideal-MHD rate for 20 <~B<~ 500 mG (2 <~B<~ 50 mG). Similarly, perturbations incorporating Hall conductivity have a higher wavenumber and grow faster than solutions in the ambipolar diffusion limit for B<~ 100 mG (B<~ 10 mG). Unstable modes grow even at the mid-plane for B>~ 100 mG (B~ 1 mG), but for weaker fields, a small dead region exists. This study shows that, despite the low magnetic coupling, the magnetic field is dynamically important for a large range of fluid conditions and field strengths in protostellar discs. An example of such magnetic activity is the generation of MRI unstable modes, which are supported at 1 au for field strengths up to a few gauss. Hall diffusion largely determines the structure and growth rate of these perturbations for all studied radii. At radii of order 1 au, in particular, it is crucial to incorporate the full conductivity tensor in the analysis of this instability and more generally in studies of the dynamics of astrophysical discs.

SAR (Synthetic Aperture Radar). Earth observing system. Volume 2F: Instrument panel report

NASA Technical Reports Server (NTRS)

1987-01-01

The scientific and engineering requirements for the Earth Observing System (EOS) imaging radar are provided. The radar is based on Shuttle Imaging Radar-C (SIR-C), and would include three frequencies: 1.25 GHz, 5.3 GHz, and 9.6 GHz; selectable polarizations for both transmit and receive channels; and selectable incidence angles from 15 to 55 deg. There would be three main viewing modes: a local high-resolution mode with typically 25 m resolution and 50 km swath width; a regional mapping mode with 100 m resolution and up to 200 km swath width; and a global mapping mode with typically 500 m resolution and up to 700 km swath width. The last mode allows global coverage in three days. The EOS SAR will be the first orbital imaging radar to provide multifrequency, multipolarization, multiple incidence angle observations of the entire Earth. Combined with Canadian and Japanese satellites, continuous radar observation capability will be possible. Major applications in the areas of glaciology, hydrology, vegetation science, oceanography, geology, and data and information systems are described.

Determinants of Effective Information Transfer in International Regulatory Standards Adoption

ERIC Educational Resources Information Center

Popescu, Denisa

2010-01-01

The role of international regulatory standards within the current global environment has become of the most importance. The age of the global system and free market capitalism carried us into the unprecedented age of regulations, and standard setting. Regulations are now becoming the emerging mode of global governance. This study focuses on…

MHD-model for low-frequency waves in a tokamak with toroidal plasma rotation and problem of existence of global geodesic acoustic modes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lakhin, V. P.; Sorokina, E. A., E-mail: sorokina.ekaterina@gmail.com, E-mail: vilkiae@gmail.com; Ilgisonis, V. I.

2015-12-15

A set of reduced linear equations for the description of low-frequency perturbations in toroidally rotating plasma in axisymmetric tokamak is derived in the framework of ideal magnetohydrodynamics. The model suitable for the study of global geodesic acoustic modes (GGAMs) is designed. An example of the use of the developed model for derivation of the integral conditions for GGAM existence and of the corresponding dispersion relation is presented. The paper is dedicated to the memory of academician V.D. Shafranov.

An Analysis of Fundamental Mode Surface Wave Amplitude Measurements

NASA Astrophysics Data System (ADS)

Schardong, L.; Ferreira, A. M.; van Heijst, H. J.; Ritsema, J.

2014-12-01

Seismic tomography is a powerful tool to decipher the Earth's interior structure at various scales. Traveltimes of seismic waves are widely used to build velocity models, whereas amplitudes are still only seldomly accounted for. This mainly results from our limited ability to separate the various physical effects responsible for observed amplitude variations, such as focussing/defocussing, scattering and source effects. We present new measurements from 50 global earthquakes of fundamental-mode Rayleigh and Love wave amplitude anomalies measured in the period range 35-275 seconds using two different schemes: (i) a standard time-domain amplitude power ratio technique; and (ii) a mode-branch stripping scheme. For minor-arc data, we observe amplitude anomalies with respect to PREM in the range of 0-4, for which the two measurement techniques show a very good overall agreement. We present here a statistical analysis and comparison of these datasets, as well as comparisons with theoretical calculations for a variety of 3-D Earth models. We assess the geographical coherency of the measurements, and investigate the impact of source, path and receiver effects on surface wave amplitudes, as well as their variations with frequency in a wider range than previously studied.

Quantum fluctuations and CMB anisotropies in one-bubble open inflation models

NASA Astrophysics Data System (ADS)

Yamamoto, Kazuhiro; Sasaki, Misao; Tanaka, Takahiro

1996-10-01

We first develop a method to calculate a complete set of mode functions that describe the quantum fluctuations generated in one-bubble open inflation models. We consider two classes of models. One is a single scalar field model proposed by Bucher, Goldhaber, and Turok and by us as an example of the open inflation scenario, and the other is a two-field model such as the ``supernatural'' inflation proposed by Linde and Mezhlumian. In both cases we assume the difference in the vacuum energy density between inside and outside the bubble is negligible. There are two kinds of mode functions. One kind has the usual continuous spectrum and the other has a discrete spectrum with characteristic wavelengths exceeding the spatial curvature scale. The latter can be further divided into two classes in terms of its origin. One is called the de Sitter supercurvature mode, which arises due to the global spacetime structure of de Sitter space, and the other is due to fluctuations of the bubble wall. We calculate the spectrum of quantum fluctuations in these models and evaluate the resulting large angular scale CMB anisotropies. We find there are ranges of model parameters that are consistent with observed CMB anisotropies.

Quasi-periodic oscillations in superfluid, relativistic magnetars with nuclear pasta phases

NASA Astrophysics Data System (ADS)

Passamonti, Andrea; Pons, José A.

2016-12-01

We study the torsional magneto-elastic oscillations of relativistic superfluid magnetars and explore the effects of a phase transition in the crust-core interface (nuclear pasta) which results in a weaker elastic response. Exploring various models with different extension of nuclear pasta phases, we find that the differences in the oscillation spectrum present in purely elastic modes (weak magnetic field) are smeared out with increasing strength of the magnetic field. For magnetar conditions, the main characteristic and features of models without nuclear pasta are preserved. We find, in general, two classes of magneto-elastic oscillations which exhibit a different oscillation pattern. For Bp < 4 × 1014 G, the spectrum is characterized by the turning points and edges of the continuum which are mostly confined into the star's core, and have no constant phase. Increasing the magnetic field, we find, in addition, several magneto-elastic oscillations which reach the surface and have an angular structure similar to crustal modes. These global magneto-elastic oscillations show a constant phase and become dominant when Bp > 5 × 1014 G. We do not find any evidence of fundamental pure crustal modes in the low-frequency range (below 200 Hz) for Bp ≥ 1014 G.

MIT's interferometer CST testbed

NASA Technical Reports Server (NTRS)

Hyde, Tupper; Kim, ED; Anderson, Eric; Blackwood, Gary; Lublin, Leonard

1990-01-01

The MIT Space Engineering Research Center (SERC) has developed a controlled structures technology (CST) testbed based on one design for a space-based optical interferometer. The role of the testbed is to provide a versatile platform for experimental investigation and discovery of CST approaches. In particular, it will serve as the focus for experimental verification of CSI methodologies and control strategies at SERC. The testbed program has an emphasis on experimental CST--incorporating a broad suite of actuators and sensors, active struts, system identification, passive damping, active mirror mounts, and precision component characterization. The SERC testbed represents a one-tenth scaled version of an optical interferometer concept based on an inherently rigid tetrahedral configuration with collecting apertures on one face. The testbed consists of six 3.5 meter long truss legs joined at four vertices and is suspended with attachment points at three vertices. Each aluminum leg has a 0.2 m by 0.2 m by 0.25 m triangular cross-section. The structure has a first flexible mode at 31 Hz and has over 50 global modes below 200 Hz. The stiff tetrahedral design differs from similar testbeds (such as the JPL Phase B) in that the structural topology is closed. The tetrahedral design minimizes structural deflections at the vertices (site of optical components for maximum baseline) resulting in reduced stroke requirements for isolation and pointing of optics. Typical total light path length stability goals are on the order of lambda/20, with a wavelength of light, lambda, of roughly 500 nanometers. It is expected that active structural control will be necessary to achieve this goal in the presence of disturbances.

Conformational changes in the expression domain of the Escherichia coli thiM riboswitch

PubMed Central

Rentmeister, Andrea; Mayer, Günter; Kuhn, Nicole; Famulok, Michael

2007-01-01

The thiM riboswitch contains an aptamer domain that adaptively binds the coenzyme thiamine pyrophosphate (TPP). The binding of TPP to the aptamer domain induces structural rearrangements that are relayed to a second domain, the so-called expression domain, thereby interfering with gene expression. The recently solved crystal structures of the aptamer domains of the thiM riboswitches in complex with TPP revealed how TPP stabilizes secondary and tertiary structures in the RNA ligand complex. To understand the global modes of reorganization between the two domains upon metabolite binding the structure of the entire riboswitch in presence and absence of TPP needs to be determined. Here we report the secondary structure of the entire thiM riboswitch from Escherichia coli in its TPP-free form and its transition into the TPP-bound variant, thereby depicting domains of the riboswitch that serve as communication links between the aptamer and the expression domain. Furthermore, structural probing provides an explanation for the lack of genetic control exerted by a riboswitch variant with mutations in the expression domain that still binds TPP. PMID:17517779

Western Pacific hydroclimate linked to global climate variability over the past two millennia

NASA Astrophysics Data System (ADS)

Griffiths, Michael L.; Kimbrough, Alena K.; Gagan, Michael K.; Drysdale, Russell N.; Cole, Julia E.; Johnson, Kathleen R.; Zhao, Jian-Xin; Cook, Benjamin I.; Hellstrom, John C.; Hantoro, Wahyoe S.

2016-06-01

Interdecadal modes of tropical Pacific ocean-atmosphere circulation have a strong influence on global temperature, yet the extent to which these phenomena influence global climate on multicentury timescales is still poorly known. Here we present a 2,000-year, multiproxy reconstruction of western Pacific hydroclimate from two speleothem records for southeastern Indonesia. The composite record shows pronounced shifts in monsoon rainfall that are antiphased with precipitation records for East Asia and the central-eastern equatorial Pacific. These meridional and zonal patterns are best explained by a poleward expansion of the Australasian Intertropical Convergence Zone and weakening of the Pacific Walker circulation (PWC) between ~1000 and 1500 CE Conversely, an equatorward contraction of the Intertropical Convergence Zone and strengthened PWC occurred between ~1500 and 1900 CE. Our findings, together with climate model simulations, highlight the likelihood that century-scale variations in tropical Pacific climate modes can significantly modulate radiatively forced shifts in global temperature.

Sea salt emission, transport and influence on size-segregated nitrate simulation: a case study in northwestern Europe by WRF-Chem

NASA Astrophysics Data System (ADS)

Chen, Ying; Cheng, Yafang; Ma, Nan; Wolke, Ralf; Nordmann, Stephan; Schüttauf, Stephanie; Ran, Liang; Wehner, Birgit; Birmili, Wolfram; Denier van der Gon, Hugo A. C.; Mu, Qing; Barthel, Stefan; Spindler, Gerald; Stieger, Bastian; Müller, Konrad; Zheng, Guang-Jie; Pöschl, Ulrich; Su, Hang; Wiedensohler, Alfred

2016-09-01

Sea salt aerosol (SSA) is one of the major components of primary aerosols and has significant impact on the formation of secondary inorganic particles mass on a global scale. In this study, the fully online coupled WRF-Chem model was utilized to evaluate the SSA emission scheme and its influence on the nitrate simulation in a case study in Europe during 10-20 September 2013. Meteorological conditions near the surface, wind pattern and thermal stratification structure were well reproduced by the model. Nonetheless, the coarse-mode (PM1 - 10) particle mass concentration was substantially overestimated due to the overestimation of SSA and nitrate. Compared to filter measurements at four EMEP stations (coastal stations: Bilthoven, Kollumerwaard and Vredepeel; inland station: Melpitz), the model overestimated SSA concentrations by a factor of 8-20. We found that this overestimation was mainly caused by overestimated SSA emissions over the North Sea during 16-20 September. Over the coastal regions, SSA was injected into the continental free troposphere through an "aloft bridge" (about 500 to 1000 m above the ground), a result of the different thermodynamic properties and planetary boundary layer (PBL) structure between continental and marine regions. The injected SSA was further transported inland and mixed downward to the surface through downdraft and PBL turbulence. This process extended the influence of SSA to a larger downwind region, leading, for example, to an overestimation of SSA at Melpitz, Germany, by a factor of ˜ 20. As a result, the nitrate partitioning fraction (ratio between particulate nitrate and the summation of particulate nitrate and gas-phase nitric acid) increased by about 20 % for the coarse-mode nitrate due to the overestimation of SSA at Melpitz. However, no significant difference in the partitioning fraction for the fine-mode nitrate was found. About 140 % overestimation of the coarse-mode nitrate resulted from the influence of SSA at Melpitz. In contrast, the overestimation of SSA inhibited the nitrate particle formation in the fine mode by about 20 % because of the increased consumption of precursor by coarse-mode nitrate formation.

The effects of the theoretical formalism and data selection on mantle models derived from waveform tomography

NASA Astrophysics Data System (ADS)

Mégnin, Charles; Romanowicz, Barbara

1999-08-01

Most global tomographic models to date are derived using a combination of surface wave (or normal-mode) data and body wave traveltime data. The traveltime approach limits the number of phases available for inversion by requiring them to be isolated on the seismogram. This may ultimately result in limiting the resolution of 3-D structure, at least in some depth ranges in the mantle. In a previous study, we successfully derived a degree 12 whole-mantle SH-velocity tomographic model (SAW12D) using exclusively waveform data. In that inversion, a normal-mode formalism suitable for body waveforms, the non-linear asymptotic coupling theory (NACT), was combined with a body wave windowing scheme, referred to as the `individual wavepacket' (IW) technique, which allows one to assign individual weights to different body wave energy packets. We here compare the relative merits of this choice of theoretical formalism and windowing scheme at different depth ranges in the mantle. Choosing as the reference a model obtained using 7500 transverse-component body wave and 8000 surface wave seismograms and the NACT and IW approaches, we discuss the relative performance of the path average approximation (PAVA), a zeroth-order theoretical approximation appropriate for single-mode surface waves, relative to NACT, and compare the IW windowing scheme with a more standard `full window' (FW) approach, in which a single time window is considered from the first body wave arrival to the fundamental-mode surface waves. The combination PAVA/FW is often used in global tomography to supplement the traveltime data. We show that although the quality of the image derived under the PAVA/FW formalism is very similar to that derived under NACT/IW in the first 300 km of the upper mantle, where the resolution is dominated by surface waves, it deteriorates at greater depths. Images of the lower mantle are shown to be strongly sensitive to the theoretical formalism. In contrast, the resolution of structure near the core-mantle boundary depends mostly on the windowing scheme. This is because this resolution is controlled by low-amplitude phases such as S_diff, which are downweighted in the FW scheme. Whilst the image obtained in D'' using the combination NACT/IW is in good agreement with images obtained by other authors using both waveforms and traveltimes, we show that, when using FW, uppermost mantle structure can be mapped into D''. This result is confirmed by synthetic tests performed on a composite of the upper-mantle geodynamic model 3SMAC. We also show, based on synthetic tests, that for structures in the upper mantle with sharp boundaries, differences are observed between NACT and PAVA. Whilst a combination of traveltimes and surface wave data is adequate for resolving relatively smooth features in the mantle, our results show that by potentially increasing the achievable sampling, the waveform approach shows great promise for future high-resolution tomographic modelling of mantle structure, if cast in an appropriate theoretical framework.

Nitroimidazoles, Quinolones and Oxazolidinones as Fluorine Bearing Antitubercular Clinical Candidates.

PubMed

Patel, Rahul V; Keum, Young-Soo; Park, Se Won

2015-01-01

Tuberculosis is a leading killer of lives worldwide and the global curse of multi-drug resistant tuberculosis is attaining really dangerous levels. Synergistic interaction of HIV and TB is the twin epidemics in resource-limited countries as each potentiate progression of the other. The increasing emergence of MDR-TB and XDR-TB place an immense burden for the treatment of TB with currently available drugs. The situation urgently demands for the discovery of new drugs with novel mode of action and differs in structural features in order to overcome resistance appears in conventional TB therapeutics. The present report covers the discovery of three classes of antituberculosis drugs, Nitroimidazoles, Quinolones and Oxazolidinones, undergoing clinical development with fluorine atom in their structures. Highly electronegative fluorine atom plays a signature role in advancing medicinal innovations as it existence in the drug compounds critically influences metabolic stability and lipophilicity thereby delaying its elimination by the body which results into a long term in vivo efficiency of the drug. Presence of fluorine atom(s) in the drug structures described in this report, has been associated with the several fold increase in the overall potency of the compound as demonstrated since the early discoveries. 6 Fluorinated derivatives from these three classes as pretomanid, delamanid, moxifloxacin, gatifloxacin, linezolid and sutezolid have been discussed with their antituberculosis effects, mode of action, chemical synthetic routes and results of clinical studies.

Application of stroboscopic and pulsed-laser electronic speckle pattern interferometry (ESPI) to modal analysis problems

NASA Astrophysics Data System (ADS)

Van der Auweraer, H.; Steinbichler, H.; Vanlanduit, S.; Haberstok, C.; Freymann, R.; Storer, D.; Linet, V.

2002-04-01

Accurate structural models are key to the optimization of the vibro-acoustic behaviour of panel-like structures. However, at the frequencies of relevance to the acoustic problem, the structural modes are very complex, requiring high-spatial-resolution measurements. The present paper discusses a vibration testing system based on pulsed-laser holographic electronic speckle pattern interferometry (ESPI) measurements. It is a characteristic of the method that time-triggered (and not time-averaged) vibration images are obtained. Its integration into a practicable modal testing and analysis procedure is reviewed. The accumulation of results at multiple excitation frequencies allows one to build up frequency response functions. A novel parameter extraction approach using spline-based data reduction and maximum-likelihood parameter estimation was developed. Specific extensions have been added in view of the industrial application of the approach. These include the integration of geometry and response information, the integration of multiple views into one single model, the integration with finite-element model data and the prior identification of the critical panels and critical modes. A global procedure was hence established. The approach has been applied to several industrial case studies, including car panels, the firewall of a monovolume car, a full vehicle, panels of a light truck and a household product. The research was conducted in the context of the EUREKA project HOLOMODAL and the Brite-Euram project SALOME.

Effects of whistler mode hiss waves on the radiation belts structure during quiet times

NASA Astrophysics Data System (ADS)

Ripoll, J. F.; Santolik, O.; Reeves, G. D.; Kurth, W. S.; Denton, M.; Loridan, V.; Thaller, S. A.; Cunningham, G.; Kletzing, C.; Turner, D. L.; Henderson, M. G.; Ukhorskiy, S.; Drozdov, A.; Cervantes Villa, J. S.; Shprits, Y.

2017-12-01

We present dynamic Fokker-Planck simulations of the electron radiation belts and slot formation during the quiet days that can follow a storm. Simulations are made for all energies and L-shells between 2 and 6 in the view of recovering the observations of two particular events. Pitch angle diffusion is essential to energy structure of the belts and slot region. Pitch angle diffusion is computed from data-driven spatially and temporally-resolved whistler mode hiss wave and ambient plasma observations from the Van Allen Probes satellites. The simulations are performed either with a 3D formulation that uses pitch angle diffusion coefficients or with a simpler 1D Fokker-Planck equation based on losses computed from a lifetime. Validation is carried out globally against Magnetic Electron and Ion Spectrometer observations of the belts at all energy. Results are complemented with a sensitivity study involving different radial diffusion coefficients, electron lifetimes, and pitch angle diffusion coefficients. We discuss which models allow to recover the observed "S-shaped" energy-dependent inner boundary to the outer zone that results from the competition between diffusive radial transport and losses. Periods when the plasmasphere extends beyond L 5 favor long-lasting hiss losses from the outer belt. Through these simulations, we explain the full structure in energy and L-shell of the belts and the slot formation by hiss scattering during quiet storm recovery.

A guided-wave system for monitoring the wing skin-to-spar bond in unmanned aerial vehicles

NASA Astrophysics Data System (ADS)

Matt, Howard; Bartoli, Ivan; Lanza di Scalea, Francesco; Marzani, Alessandro; Coccia, Stefano; Oliver, Joseph; Kosmatka, John; Rizzo, Piervincenzo; Restivo, Gaetano

2005-05-01

Unmanned Aerial Vehicles (UAVs) are being increasingly used in military as well as civil applications. A critical part of the structure is the adhesive bond between the wing skin and the supporting spar. If not detected early, bond defects originating during manufacturing or in service flight can lead to inefficient flight performance and eventual global failure. This paper will present results from a bond inspection system based on attached piezoelectric disks probing the skin-to-spar bondline with ultrasonic guided waves in the hundreds of kilohertz range. The test components were CFRP composite panels of two different fiber layups bonded to a CFRP composite tube using epoxy adhesive. Three types of bond conditions were simulated, namely regions of poor cohesive strength, regions with localized disbonds and well bonded regions. The root mean square and variance of the received time-domain signals and their discrete wavelet decompositions were computed for the dominant modes propagating through the various bond regions in two different inspection configurations. Semi-analytical finite element analysis of the bonded multilayer joint was also carried out to identify and predict the sensitivity of the predominant carrier modes to the different bond defects. Emphasis of this research is based upon designing a built-in system for monitoring the structural integrity of bonded joints in UAVs and other aerospace structures.

Numerical Implementation of a Multiple-ISV Thermodynamically-Based Work Potential Theory for Modeling Progressive Damage and Failure in Fiber-Reinforced Laminates

NASA Technical Reports Server (NTRS)

Pineda, Evan J.; Waas, Anthony M.

2011-01-01

A thermodynamically-based work potential theory for modeling progressive damage and failure in fiber-reinforced laminates is presented. The current, multiple-internal state variable (ISV) formulation, enhanced Schapery theory (EST), utilizes separate ISVs for modeling the effects of damage and failure. Damage is considered to be the effect of any structural changes in a material that manifest as pre-peak non-linearity in the stress versus strain response. Conversely, failure is taken to be the effect of the evolution of any mechanisms that results in post-peak strain softening. It is assumed that matrix microdamage is the dominant damage mechanism in continuous fiber-reinforced polymer matrix laminates, and its evolution is controlled with a single ISV. Three additional ISVs are introduced to account for failure due to mode I transverse cracking, mode II transverse cracking, and mode I axial failure. Typically, failure evolution (i.e., post-peak strain softening) results in pathologically mesh dependent solutions within a finite element method (FEM) setting. Therefore, consistent character element lengths are introduced into the formulation of the evolution of the three failure ISVs. Using the stationarity of the total work potential with respect to each ISV, a set of thermodynamically consistent evolution equations for the ISVs is derived. The theory is implemented into commercial FEM software. Objectivity of total energy dissipated during the failure process, with regards to refinements in the FEM mesh, is demonstrated. The model is also verified against experimental results from two laminated, T800/3900-2 panels containing a central notch and different fiber-orientation stacking sequences. Global load versus displacement, global load versus local strain gage data, and macroscopic failure paths obtained from the models are compared to the experiments.

A Thermodynamically-Based Mesh Objective Work Potential Theory for Predicting Intralaminar Progressive Damage and Failure in Fiber-Reinforced Laminates

NASA Technical Reports Server (NTRS)

Pineda, Evan J.; Waas, Anthony M.

2012-01-01

A thermodynamically-based work potential theory for modeling progressive damage and failure in fiber-reinforced laminates is presented. The current, multiple-internal state variable (ISV) formulation, enhanced Schapery theory (EST), utilizes separate ISVs for modeling the effects of damage and failure. Damage is considered to be the effect of any structural changes in a material that manifest as pre-peak non-linearity in the stress versus strain response. Conversely, failure is taken to be the effect of the evolution of any mechanisms that results in post-peak strain softening. It is assumed that matrix microdamage is the dominant damage mechanism in continuous fiber-reinforced polymer matrix laminates, and its evolution is controlled with a single ISV. Three additional ISVs are introduced to account for failure due to mode I transverse cracking, mode II transverse cracking, and mode I axial failure. Typically, failure evolution (i.e., post-peak strain softening) results in pathologically mesh dependent solutions within a finite element method (FEM) setting. Therefore, consistent character element lengths are introduced into the formulation of the evolution of the three failure ISVs. Using the stationarity of the total work potential with respect to each ISV, a set of thermodynamically consistent evolution equations for the ISVs is derived. The theory is implemented into commercial FEM software. Objectivity of total energy dissipated during the failure process, with regards to refinements in the FEM mesh, is demonstrated. The model is also verified against experimental results from two laminated, T800/3900-2 panels containing a central notch and different fiber-orientation stacking sequences. Global load versus displacement, global load versus local strain gage data, and macroscopic failure paths obtained from the models are compared to the experiments.

Mode conversion in metal-insulator-metal waveguide with a shifted cavity

NASA Astrophysics Data System (ADS)

Wang, Yueke; Yan, Xin

2018-01-01

We propose a method, which is utilized to achieve the plasmonic mode conversion in metal-insulator-metal (MIM) waveguide, theoretically. Our proposed structure is composed of bus waveguides and a shifted cavity. The shifted cavity can choose out a plasmonic mode (a- or s-mode) when it is in Fabry-Perot (FP) resonance. The length of the shifted cavity L is carefully chosen, and our structure can achieve the mode conversion between a- and s-mode in the communication region. Besides, our proposed structure can also achieve plasmonic mode-division multiplexing. All the numerical simulations are carried on by the finite element method to verify our design.

The acoustic low-degree modes of the Sun measured with 14 years of continuous GOLF & VIRGO measurements

NASA Astrophysics Data System (ADS)

García, R. A.; Salabert, D.; Ballot, J.; Sato, K.; Mathur, S.; Jiménez, A.

2011-01-01

The helioseismic Global Oscillation at Low Frequency (GOLF) and the Variability of solar Irradiance and Gravity Oscillations (VIRGO) instruments onboard SoHO, have been observing the Sun continuously for the last 14 years. In this preliminary work, we characterize the acoustic modes over the entire p-mode range in both, Doppler velocity and luminosity, with a special care for the low-frequency modes taking advantage of the stability and the high duty cycle of space observations.

Global modeling of land water and energy balances. Part II: Land-characteristic contributions to spatial variability

USGS Publications Warehouse

Milly, P.C.D.; Shmakin, A.B.

2002-01-01

Land water and energy balances vary around the globe because of variations in amount and temporal distribution of water and energy supplies and because of variations in land characteristics. The former control (water and energy supplies) explains much more variance in water and energy balances than the latter (land characteristics). A largely untested hypothesis underlying most global models of land water and energy balance is the assumption that parameter values based on estimated geographic distributions of soil and vegetation characteristics improve the performance of the models relative to the use of globally constant land parameters. This hypothesis is tested here through an evaluation of the improvement in performance of one land model associated with the introduction of geographic information on land characteristics. The capability of the model to reproduce annual runoff ratios of large river basins, with and without information on the global distribution of albedo, rooting depth, and stomatal resistance, is assessed. To allow a fair comparison, the model is calibrated in both cases by adjusting globally constant scale factors for snow-free albedo, non-water-stressed bulk stomatal resistance, and critical root density (which is used to determine effective root-zone depth). The test is made in stand-alone mode, that is, using prescribed radiative and atmospheric forcing. Model performance is evaluated by comparing modeled runoff ratios with observed runoff ratios for a set of basins where precipitation biases have been shown to be minimal. The withholding of information on global variations in these parameters leads to a significant degradation of the capability of the model to simulate the annual runoff ratio. An additional set of optimization experiments, in which the parameters are examined individually, reveals that the stomatal resistance is, by far, the parameter among these three whose spatial variations add the most predictive power to the model in stand-alone mode. Further single-parameter experiments with surface roughness length, available water capacity, thermal conductivity, and thermal diffusivity show very little sensitivity to estimated global variations in these parameters. Finally, it is found that even the constant-parameter model performance exceeds that of the Budyko and generalized Turc-Pike water-balance equations, suggesting that the model benefits also from information on the geographic variability of the temporal structure of forcing.

Seismic Study of the Dynamics of the Solar Subsurface from SoHO Observations

NASA Technical Reports Server (NTRS)

Korzennik, Sylvain G.; Wagner, William J. (Technical Monitor)

2001-01-01

In collaboration with Dr. Baudin, we have developed and refined the new observational methodology for local helioseismology known as time-distance analysis. Global helioseismology study the solar oscillations as a superposition of resonant modes, whose properties (mode frequencies) reflect the global structure of the sun (sound speed stratification, rotation rate, etc). In contrast, local helioseismology look at the solar oscillations as wave packets whose propagation will be affected by perturbations of the media sampled. These local perturbations (sound speed or velocity flows) will modify the propagation time, that in turn can be used as a diagnostic tool for a given region. From a data reduction perspective, the processing of solar dopplergrams that result in time-distance maps, i.e. propagation times as a function of distance between bounces at the surface, is radically different from the methodology used for global mode analysis. We have, in a first step, further develop the programs needed to carry out such analysis. We have then applied them to NMI data set, and explore the trade-off between various averaging and filtering approaches - steps required to improve the signal-to-noise ratio of correlation maps - and the resulting stability and precision of the fitted propagation times. While excessive averaging (whether over space, propagation distance, or time) will reduce the diagnostic potential of the method, insufficient averaging lead to unstable fits, or uncertainties so large as to hide the information we seek. In a second phase, we have developed the analysis methodology required to infer local properties from perturbation in time propagation. Namely, we have developed time-distance inversion techniques, with an emphasis on inferences of velocity flows from time anomalies. Note also that during the period covered by this grant, all the investigators on this proposal (i.e., Drs. Baudin, Eff-Darwich, Korzennik, and Noyes) took part in the organization of the SOHO 6 /GONG 99 Workshop: Structure and Dynamics of the Interior of the Sun and Sunlike Stars, held on June 1-4 1999 at the Boston Park Plaza Hotel in Boston, Massachusetts, USA. it was very well attended by more than 160 participants from 26 countries from all over the world. The proceedings were published in two volumes as ESA SP-418, with Sessions I-III in Volume 1, and Sessions IV-VI in Volume 2 (1,000 pages in total). The complete contents are also included in digital form on a CD-ROM included with Volume 1. This CD-ROM also contains additional multi-media material that complements some of the contributions.

Skill of a global seasonal ensemble streamflow forecasting system

NASA Astrophysics Data System (ADS)

Candogan Yossef, Naze; Winsemius, Hessel; Weerts, Albrecht; van Beek, Rens; Bierkens, Marc

2013-04-01

Forecasting of water availability and scarcity is a prerequisite for managing the risks and opportunities caused by the inter-annual variability of streamflow. Reliable seasonal streamflow forecasts are necessary to prepare for an appropriate response in disaster relief, management of hydropower reservoirs, water supply, agriculture and navigation. Seasonal hydrological forecasting on a global scale could be valuable especially for developing regions of the world, where effective hydrological forecasting systems are scarce. In this study, we investigate the forecasting skill of the global seasonal streamflow forecasting system FEWS-World, using the global hydrological model PCR-GLOBWB. FEWS-World has been setup within the European Commission 7th Framework Programme project Global Water Scarcity Information Service (GLOWASIS). Skill is assessed in historical simulation mode as well as retroactive forecasting mode. The assessment in historical simulation mode used a meteorological forcing based on observations from the Climate Research Unit of the University of East Anglia and the ERA-40 reanalysis of the European Center for Medium-Range Weather Forecasts (ECMWF). We assessed the skill of the global hydrological model PCR-GLOBWB in reproducing past discharge extremes in 20 large rivers of the world. This preliminary assessment concluded that the prospects for seasonal forecasting with PCR-GLOBWB or comparable models are positive. However this assessment did not include actual meteorological forecasts. Thus the meteorological forcing errors were not assessed. Yet, in a forecasting setup, the predictive skill of a hydrological forecasting system is affected by errors due to uncertainty from numerical weather prediction models. For the assessment in retroactive forecasting mode, the model is forced with actual ensemble forecasts from the seasonal forecast archives of ECMWF. Skill is assessed at 78 stations on large river basins across the globe, for all the months of the year and for lead times up to 6 months. The forecasted discharges are compared with observed monthly streamflow records using the ensemble verification measures Brier Skill Score (BSS) and Continuous Ranked Probability Score (CRPS). The eventual goal is to transfer FEWS-World to operational forecasting mode, where the system will use operational seasonal forecasts from ECMWF. The results will be disseminated on the internet, and hopefully provide information that is valuable for users in data and model-poor regions of the world.

Coupling of small, low-loss hexapole mode with photonic crystal slab waveguide mode.

PubMed

Kim, Guk-Hyun; Lee, Yong-Hee; Shinya, Akihiko; Notomi, Masaya

2004-12-27

Coupling characteristics between the single-cell hexapole mode and the triangular-lattice photonic crystal slab waveguide mode is studied by the finite-difference time-domain method. The single-cell hexapole mode has a high quality factor (Q) of 3.3Chi106 and a small modal volume of 1.18(lambda/n)3. Based on the symmetry, three representative types of coupling geometries (shoulder-couple, butt-couple and side-couple structures) are selected and tested. The coupling efficiency shows strong dependence on the transverse overlap of the cavity mode and the waveguide mode over the region of the waveguide. The shoulder-couple structure shows best coupling characteristics among three tested structures. For example, two shouldercouple waveguides and a hexapole cavity result in a high performance resonant-tunneling-filter with Q of 9.7Chi105 and transmittance of 0.48. In the side-couple structure, the coupling strength is much weaker than that of the shoulder-couple structure because of the poor spatial overlap between the mode profiles. In the direct-couple structure, the energy transfer from the cavity to the waveguide is prohibited because of the symmetry mismatch and no coupling is observed.

The Europa Imaging System (EIS): Investigating Europa's geology, ice shell, and current activity

NASA Astrophysics Data System (ADS)

Turtle, Elizabeth; Thomas, Nicolas; Fletcher, Leigh; Hayes, Alexander; Ernst, Carolyn; Collins, Geoffrey; Hansen, Candice; Kirk, Randolph L.; Nimmo, Francis; McEwen, Alfred; Hurford, Terry; Barr Mlinar, Amy; Quick, Lynnae; Patterson, Wes; Soderblom, Jason

2016-07-01

NASA's Europa Mission, planned for launch in 2022, will perform more than 40 flybys of Europa with altitudes at closest approach as low as 25 km. The instrument payload includes the Europa Imaging System (EIS), a camera suite designed to transform our understanding of Europa through global decameter-scale coverage, topographic and color mapping, and unprecedented sub- meter-scale imaging. EIS combines narrow-angle and wide-angle cameras to address these science goals: • Constrain the formation processes of surface features by characterizing endogenic geologic structures, surface units, global cross-cutting relationships, and relationships to Europa's subsurface structure and potential near-surface water. • Search for evidence of recent or current activity, including potential plumes. • Characterize the ice shell by constraining its thickness and correlating surface features with subsurface structures detected by ice penetrating radar. • Characterize scientifically compelling landing sites and hazards by determining the nature of the surface at scales relevant to a potential lander. EIS Narrow-angle Camera (NAC): The NAC, with a 2.3°° x 1.2°° field of view (FOV) and a 10-μμrad instantaneous FOV (IFOV), achieves 0.5-m pixel scale over a 2-km-wide swath from 50-km altitude. A 2-axis gimbal enables independent targeting, allowing very high-resolution stereo imaging to generate digital topographic models (DTMs) with 4-m spatial scale and 0.5-m vertical precision over the 2-km swath from 50-km altitude. The gimbal also makes near-global (>95%) mapping of Europa possible at ≤50-m pixel scale, as well as regional stereo imaging. The NAC will also perform high-phase-angle observations to search for potential plumes. EIS Wide-angle Camera (WAC): The WAC has a 48°° x 24°° FOV, with a 218-μμrad IFOV, and is designed to acquire pushbroom stereo swaths along flyby ground-tracks. From an altitude of 50 km, the WAC achieves 11-m pixel scale over a 44-km-wide swath, generating DTMs with 32-m spatial scale and 4-m vertical precision. These data also support characterization of surface clutter for interpretation of radar deep and shallow sounding modes. Detectors: The cameras have identical rapid-readout, radiation-hard 4k x 2k CMOS detectors and can image in both pushbroom and framing modes. Color observations are acquired by pushbroom imaging using six broadband filters (~300-1050 nm), allowing mapping of surface units for correlation with geologic structures, topography, and compositional units from other instruments.

Global seismic attenuation imaging using full-waveform inversion: a comparative assessment of different choices of misfit functionals

NASA Astrophysics Data System (ADS)

Karaoǧlu, Haydar; Romanowicz, Barbara

2018-02-01

We present the results of synthetic tests that aim at evaluating the relative performance of three different definitions of misfit functionals in the context of 3-D imaging of shear wave attenuation in the earth's upper mantle at the global scale, using long-period full-waveform data. The synthetic tests are conducted with simple hypothetical upper-mantle models that contain Qμ anomalies centred at different depths and locations, with or without additional seismic velocity anomalies. To build synthetic waveform data sets, we performed simulations of 50 events in the hypothetical (target) models, using the spectral element method, filtered in the period range 60-400 s. The selected events are chosen among 273 events used in the development of radially anisotropic model SEMUCB-WM1 and recorded at 495 stations worldwide. The synthetic Z-component waveforms correspond to paths and time intervals (fundamental mode and overtone Rayleigh waves) that exist in the real waveform data set. The inversions for shear attenuation structure are carried out using a Gauss-Newton optimization scheme in which the gradient and Hessian are computed using normal mode perturbation theory. The three different misfit functionals considered are based on time domain waveform (WF) and waveform envelope (E-WF) differences, as well as spectral amplitude ratios (SA), between observed and predicted waveforms. We evaluate the performance of the three misfit functional definitions in the presence of seismic noise and unresolved S-wave velocity heterogeneity and discuss the relative importance of physical dispersion effects due to 3-D Qμ structure. We observed that the performance of WF is poorer than the other two misfit functionals in recovering attenuation structure, unless anelastic dispersion effects are taken into account in the calculation of partial derivatives. WF also turns out to be more sensitive to seismic noise than E-WF and SA. Overall, SA performs best for attenuation imaging. Our tests show that it is important to account for 3-D elastic effects (focusing) before inverting for Qμ. Additionally, we show that including high signal-to-noise ratio overtone wave packets is necessary to resolve Qμ structure at depths greater than 250 km.

A strategy for the observation of volcanism on Earth from space.

PubMed

Wadge, G

2003-01-15

Heat, strain, topography and atmospheric emissions associated with volcanism are well observed by satellites orbiting the Earth. Gravity and electromagnetic transients from volcanoes may also prove to be measurable from space. The nature of eruptions means that the best strategy for measuring their dynamic properties remotely from space is to employ two modes with different spatial and temporal samplings: eruption mode and background mode. Such observational programmes are best carried out at local or regional volcano observatories by coupling them with numerical models of volcanic processes. Eventually, such models could become multi-process, operational forecast models that assimilate the remote and other observables to constrain their uncertainties. The threat posed by very large magnitude explosive eruptions is global and best addressed by a spaceborne observational programme with a global remit.

Global Citizenship as a Floating Signifier: Lessons from UK Universities

ERIC Educational Resources Information Center

Moraes, Silvia Elisabeth

2014-01-01

In a world where people interact across countries, citizens need to find their role in the global community; therefore, global citizenship (GC) has become an influential theme in higher education. Due to its various interpretations and modes of action, in this paper GC is addressed as a floating signifier. Our main data comes from interviews with…

ITG modes in the presence of inhomogeneous field-aligned flow

NASA Astrophysics Data System (ADS)

Sen, S.; McCarthy, D. R.; Lontano, M.; Lazzaro, E.; Honary, F.

2010-02-01

In a recent paper, Varischetti et al. (Plasma Phys. Contr. F. 2008, 50, 105008-1-15) have found that in a slab geometry the effect of the flow shear in the field-aligned parallel flow on the linear mode stability of the ion temperature gradient (ITG)-driven modes is not very prominent. They found that the flow shear also has a negligible effect on the mode characteristics. The work in this paper shows that the inclusion of flow curvature in the field-aligned flow can have a considerable effect on the mode stability; it can also change the mode structure so as to effect the mixing length transport in the core region of a fusion device. Flow shear, on the other hand, has indeed an insignificant role in the mode stability and mode structure. Inhomogeneous field-aligned flow should therefore still be considered for a viable candidate in controlling the ITG mode stability and mode structure.

Spacecraft Dynamic Characterization by Strain Energies Method

NASA Astrophysics Data System (ADS)

Bretagne, J.-M.; Fragnito, M.; Massier, S.

2002-01-01

In the last years the significant increase in satellite broadcasting demand, with the wide band communication dawn, has given a great impulse to the telecommunication satellite market. The big demand is translated from operators (such as SES/Astra, Eutelsat, Intelsat, Inmarsat, EuroSkyWay etc.) in an increase of orders of telecom satellite to the world industrials. The largest part of these telecom satellite orders consists of Geostationary platforms which grow more and more in mass (over 5 tons) due to an ever longer demanded lifetime (up to 20 years), and become more complex due to the need of implementing an ever larger number of repeaters, antenna reflectors and feeds, etc... In this frame, the mechanical design and verification of these large spacecraft become difficult and ambitious at the same time, driven by the dry mass limitation objective. By the Finite Element Method (FEM), and on the basis of the telecom satellite heritage of a world leader constructor such as Alcatel Space Industries it is nowadays possible to model these spacecraft in a realistic and confident way in order to identify the main global dynamic aspects such as mode shapes, mass participation and/or dynamic responses. But on the other hand, one of the main aims consists in identifying soon in a program the most critical aspects of the system behavior in the launch dynamic environment, such as possible dynamic coupling between the different subsystems and secondary structures of the spacecraft (large deployable reflectors, thrusters, etc.). To this aim a numerical method has been developed in the frame of the Alcatel SPACEBUS family program, using MSC/Nastran capabilities and it is presented in this paper. The method is based on Spacecraft sub-structuring and strain energy calculation. The method mainly consists of two steps : 1) subsystem modal strain energy ratio (with respect to the global strain energy); 2) subsystem strain energy calculation for each mode according to the base driven forcing direction. The first step consists of the following : for each part the modal strain energy ratio is calculated with respect to the total strain energy of the Spacecraft global model. The results are shown in tabular form : for each mode the parts with a strain energy ratio greater then 1% are reported. The second step can be summarized as follows : for each part or subsystem, in order to compare the relative importance, in terms of dynamic response, among all the modes identified by the percentage method, the subsystem strain energy in Joule is calculated for each axis 1g base driven excitation. Then plots are given where, for each subsystem and for each base forcing direction, the strain energy values are shown in a 0-100 Hz frequency range. Through this method, for each subsystem the sizing eigenfrequencies and associated excitation axis are identified in a clear way, allowing at the same time a better understanding of dynamic responses.

Developmental metaplasticity in neural circuit codes of firing and structure.

PubMed

Baram, Yoram

2017-01-01

Firing-rate dynamics have been hypothesized to mediate inter-neural information transfer in the brain. While the Hebbian paradigm, relating learning and memory to firing activity, has put synaptic efficacy variation at the center of cortical plasticity, we suggest that the external expression of plasticity by changes in the firing-rate dynamics represents a more general notion of plasticity. Hypothesizing that time constants of plasticity and firing dynamics increase with age, and employing the filtering property of the neuron, we obtain the elementary code of global attractors associated with the firing-rate dynamics in each developmental stage. We define a neural circuit connectivity code as an indivisible set of circuit structures generated by membrane and synapse activation and silencing. Synchronous firing patterns under parameter uniformity, and asynchronous circuit firing are shown to be driven, respectively, by membrane and synapse silencing and reactivation, and maintained by the neuronal filtering property. Analytic, graphical and simulation representation of the discrete iteration maps and of the global attractor codes of neural firing rate are found to be consistent with previous empirical neurobiological findings, which have lacked, however, a specific correspondence between firing modes, time constants, circuit connectivity and cortical developmental stages. Copyright © 2016 Elsevier Ltd. All rights reserved.

Validation of nonlinear gyrokinetic simulations of L- and I-mode plasmas on Alcator C-Mod

DOE Office of Scientific and Technical Information (OSTI.GOV)

Creely, A. J.; Howard, N. T.; Rodriguez-Fernandez, P.

New validation of global, nonlinear, ion-scale gyrokinetic simulations (GYRO) is carried out for L- and I-mode plasmas on Alcator C-Mod, utilizing heat fluxes, profile stiffness, and temperature fluctuations. Previous work at C-Mod found that ITG/TEM-scale GYRO simulations can match both electron and ion heat fluxes within error bars in I-mode [White PoP 2015], suggesting that multi-scale (cross-scale coupling) effects [Howard PoP 2016] may be less important in I-mode than in L-mode. New results presented here, however, show that global, nonlinear, ion-scale GYRO simulations are able to match the experimental ion heat flux, but underpredict electron heat flux (at most radii),more » electron temperature fluctuations, and perturbative thermal diffusivity in both L- and I-mode. Linear addition of electron heat flux from electron scale runs does not resolve this discrepancy. These results indicate that single-scale simulations do not sufficiently describe the I-mode core transport, and that multi-scale (coupled electron- and ion-scale) transport models are needed. In conclusion a preliminary investigation with multi-scale TGLF, however, was unable to resolve the discrepancy between ion-scale GYRO and experimental electron heat fluxes and perturbative diffusivity, motivating further work with multi-scale GYRO simulations and a more comprehensive study with multi-scale TGLF.« less

Validation of nonlinear gyrokinetic simulations of L- and I-mode plasmas on Alcator C-Mod

DOE PAGES

Creely, A. J.; Howard, N. T.; Rodriguez-Fernandez, P.; ...

2017-03-02

New validation of global, nonlinear, ion-scale gyrokinetic simulations (GYRO) is carried out for L- and I-mode plasmas on Alcator C-Mod, utilizing heat fluxes, profile stiffness, and temperature fluctuations. Previous work at C-Mod found that ITG/TEM-scale GYRO simulations can match both electron and ion heat fluxes within error bars in I-mode [White PoP 2015], suggesting that multi-scale (cross-scale coupling) effects [Howard PoP 2016] may be less important in I-mode than in L-mode. New results presented here, however, show that global, nonlinear, ion-scale GYRO simulations are able to match the experimental ion heat flux, but underpredict electron heat flux (at most radii),more » electron temperature fluctuations, and perturbative thermal diffusivity in both L- and I-mode. Linear addition of electron heat flux from electron scale runs does not resolve this discrepancy. These results indicate that single-scale simulations do not sufficiently describe the I-mode core transport, and that multi-scale (coupled electron- and ion-scale) transport models are needed. In conclusion a preliminary investigation with multi-scale TGLF, however, was unable to resolve the discrepancy between ion-scale GYRO and experimental electron heat fluxes and perturbative diffusivity, motivating further work with multi-scale GYRO simulations and a more comprehensive study with multi-scale TGLF.« less

Whispering-gallery-mode-based seismometer

DOEpatents

Fourguette, Dominique Claire; Otugen, M Volkan; Larocque, Liane Marie; Ritter, Greg Aan; Meeusen, Jason Jeffrey; Ioppolo, Tindaro

2014-06-03

A whispering-gallery-mode-based seismometer provides for receiving laser light into an optical fiber, operatively coupling the laser light from the optical fiber into a whispering-gallery-mode-based optical resonator, operatively coupling a spring of a spring-mass assembly to a housing structure; and locating the whispering-gallery-mode-based optical resonator between the spring-mass assembly and the housing structure so as to provide for compressing the whispering-gallery-mode-based optical resonator between the spring-mass assembly and the housing structure responsive to a dynamic compression force from the spring-mass assembly responsive to a motion of the housing structure relative to an inertial frame of reference.

ELM Suppression and Pedestal Structure in I-Mode Plasmas

NASA Astrophysics Data System (ADS)

Walk, John

2013-10-01

The I-mode regime is characterized by the formation of a temperature pedestal and enhanced energy confinement (H98 up to 1.2), without an accompanying density pedestal or drop in particle transport. Unlike ELMy H-modes, I-mode operation appears to have naturally-occurring suppression of large ELMs in addition to its highly favorable scalings of pedestal structure (and therefore overall performance). Instead, continuous Weakly Coherent Modes help to regulate density. Extensive study of the ELMy H-mode has led to the development of the EPED model, which utilizes calculations of coupled peeling-ballooning MHD modes and kinetic-ballooning mode (KBM) stability limits to predict the pedestal structure preceding an ELM crash. We apply similar tools to the structure and ELM stability of I-mode pedestals. Peeling-ballooning MHD calculations are completed using the ELITE code, showing I-mode pedestals to be generally MHD-stable. Under certain conditions, intermittent ELMs are observed in I-mode at reduced field, typically triggered by sawtooth crashes; modification of the temperature pedestal (and therefore the pressure profile stability) by sawtooth heat pulses is being examined in ELITE. Modeled stability to KBM turbulence in I-mode and ELMy H-mode suggests that typical I-modes are stable against KBM turbulence. Measured I-mode pedestals are significantly wider (more stable) than the width scaling with the square root of poloidal beta characteristic of the KBM-limited pedestals in ELMy H-mode. Finally, we explore scalings of pedestal structure with engineering parameters compared to ELMy H-modes on C-Mod. In particular, we focus on scalings of the pressure pedestal with heating power (and its relation to the favorable scaling of confinement with power in I-mode) and on relationships between heat flux and pedestal temperature gradients. This work is supported by DOE agreement DE-FC02-99ER54512. Theory work at General Atomics is supported by DOE agreement DE-FG02-99ER54309.

Design of the RWM Feedback Control System for NSTX

NASA Astrophysics Data System (ADS)

Bialek, James; Sabbagh, Steven; Paoletti, Franco

2002-11-01

The National Spherical Torus Experiment ( NSTX ) has been designed to investigate the physics of global mode stabilization at low aspect ratio. Present experiments are now probing performance limits determined by machine configuration and passive stabilization. For example, the ideal no-wall normalized beta limit has already been exceeded by greater than 20stabilized by a nearby perfectly conducting wall are observed to grow at a rate determined by nearby resistive structure. Sustained performance improvements may be obtained by using active feedback to suppress such long wavelength pressure driven instabilities, known as resistive wall modes (RWM). We report on the performance of several design options for an NSTX - RWM feedback control system. The VALEN feedback analysis code has been used to evaluate the performance of these configurations. We explicitly model the vacuum vessel, center stack casing, the 48 copper passive plates, their mounts, active feedback coils and sensor arrays. The highest performance system has both control coils and sensors inside the vacuum vessel. In this case it is possible to reach 94beta limit.

Detection of Rossby Waves in Multi-Parameters in Multi-Mission Satellite Observations and HYCOM Simulations in the Indian Ocean

NASA Technical Reports Server (NTRS)

Subrahmanyam, Bulusu; Heffner, David M.; Cromwell, David; Shriver, Jay F.

2009-01-01

Rossby waves are difficult to detect with in situ methods. However, as we show in this paper, they can be clearly identified in multi-parameters in multi-mission satellite observations of sea surface height (SSH), sea surface temperature (SST) and ocean color observations of chlorophyll-a (chl-a), as well as 1/12-deg global HYbrid Coordinate Ocean Model (HYCOM) simulations of SSH, SST and sea surface salinity (SSS) in the Indian Ocean. While the surface structure of Rossby waves can be elucidated from comparisons of the signal in different sea surface parameters, models are needed to gain direct information about how these waves affect the ocean at depth. The first three baroclinic modes of the Rossby waves are inferred from the Fast Fourier Transform (FFT), and two-dimensional Radon Transform (2D RT). At many latitudes the first and second baroclinic mode Rossby wave phase speeds from satellite observations and model parameters are identified.

Role models for complex networks

NASA Astrophysics Data System (ADS)

Reichardt, J.; White, D. R.

2007-11-01

We present a framework for automatically decomposing (“block-modeling”) the functional classes of agents within a complex network. These classes are represented by the nodes of an image graph (“block model”) depicting the main patterns of connectivity and thus functional roles in the network. Using a first principles approach, we derive a measure for the fit of a network to any given image graph allowing objective hypothesis testing. From the properties of an optimal fit, we derive how to find the best fitting image graph directly from the network and present a criterion to avoid overfitting. The method can handle both two-mode and one-mode data, directed and undirected as well as weighted networks and allows for different types of links to be dealt with simultaneously. It is non-parametric and computationally efficient. The concepts of structural equivalence and modularity are found as special cases of our approach. We apply our method to the world trade network and analyze the roles individual countries play in the global economy.

Collective Dynamics of Periplasmic Glutamine Binding Protein upon Domain Closure

PubMed Central

Loeffler, Hannes H.; Kitao, Akio

2009-01-01

The glutamine binding protein is a vital component of the associated ATP binding cassette transport systems responsible for the uptake of glutamine into the cell. We have investigated the global movements of this protein by molecular dynamics simulations and principal component analysis (PCA). We confirm that the most dominant mode corresponds to the biological function of the protein, i.e., a hinge-type motion upon ligand binding. The closure itself was directly observed from two independent trajectories whereby PCA was used to elucidate the nature of this closing reaction. Two intermediary states are identified and described in detail. The ligand binding induces the structural change of the hinge regions from a discontinuous β-sheet to a continuous one, which also enhances softness of the hinge and modifies the direction of hinge motion to enable closing. We also investigated the convergence behavior of PCA modes, which were found to converge rather quickly when the associated magnitudes of the eigenvalues are well separated. PMID:19883597

Controlled Growth of Gigantic Swirls in a Laboratory Magnetosphere

NASA Astrophysics Data System (ADS)

Worstell, M. W.; Mauel, M. E.; Roberts, T. M.

2012-10-01

Space and laboratory plasma confined by a strong magnetic field have remarkable properties. Low frequency mixing of the plasma occurs through the interchange of long plasma-filled tubes aligned with the magnetic field. The plasma dynamics becomes two-dimensional because these tubes can only move radially or circulate around the poles of the magnetic dipole. Studies of turbulent interchange dynamics made using the Collisionless Terella Experiment (CTX) show that turbulence appears as chaotic time-varying modes with broad global mode structures that interact nonlinearly and form an inverse cascade.footnotetextB.A. Grierson, M.W. Worstell, M.E. Mauel, Phys. Plasmas 16 055902 (2009) When we drive vortex mixing through the application of electrostatic bias to multiple probes, we break the rotational symmetry of the plasma and small vortex tubes are seen to drive larger ``gigantic'' swirls. Statistical analysis of the time-evolving spectra and measurement of the bicoherence of the turbulence show an increase of three wave coupling during non-axisymmetric electrostatic drive of the probe array.

Global optical climatology of the free tropospheric aerosol from 1.0-micron satellite occultation measurements

NASA Technical Reports Server (NTRS)

Kent, G. S.; Schaffner, S. K.; Mccormick, M. P.

1991-01-01

Measurements of the aerosol/molecular extinction ratio at 1-micron wavelength, obtained from the SAGE I, SAGE II, and SAM II solar occultation satellite experiments between 1978 and 1986, have been used to study the global-scale behavior of the upper tropospheric aerosol. The distribution of extinction ratio values shows a pronounced mode between about 0.5 and 5 in all data subsets, regardless of latitude and season. Within a given latitude band and season with mode value is nearly constant over the altitude range from about 5 km above the earth's surface to 3 km below the tropopause. The mode shows a distinct seasonal variation, with maxima in local spring and summer, and is significantly enhanced following vlocanic injection of material into the stratosphere. South of latitude 20-deg N, mode values in the absence of volcanic contamination are normally between 0.5 and 1.0 north of 20-deg N, values up to about 5 are observed, probably associated with aerosol derived from surface dust or anthropogenic sources. A secondary mode, with extinction ratios of 30 or greater and little or no variation of extinction with wavelength, is apparent just below the tropopause. This mode is believed to be associated with thin cloud along the ray path from the sun to the satellite.

UNUSUAL TRENDS IN SOLAR P-MODE FREQUENCIES DURING THE CURRENT EXTENDED MINIMUM

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tripathy, S. C.; Jain, K.; Hill, F.

2010-03-10

We investigate the behavior of the intermediate-degree mode frequencies of the Sun during the current extended minimum phase to explore the time-varying conditions in the solar interior. Using contemporaneous helioseismic data from the Global Oscillation Network Group (GONG) and the Michelson Doppler Imager (MDI), we find that the changes in resonant mode frequencies during the activity minimum period are significantly greater than the changes in solar activity as measured by different proxies. We detect a seismic minimum in MDI p-mode frequency shifts during 2008 July-August but no such signature is seen in mean shifts computed from GONG frequencies. We alsomore » analyze the frequencies of individual oscillation modes from GONG data as a function of latitude and observe a signature of the onset of the solar cycle 24 in early 2009. Thus, the intermediate-degree modes do not confirm the onset of the cycle 24 during late 2007 as reported from the analysis of the low-degree Global Oscillations at Low Frequency frequencies. Further, both the GONG and MDI frequencies show a surprising anti-correlation between frequencies and activity proxies during the current minimum, in contrast to the behavior during the minimum between cycles 22 and 23.« less

Multidecadal climate variability of global lands and oceans

USGS Publications Warehouse

McCabe, G.J.; Palecki, M.A.

2006-01-01

Principal components analysis (PCA) and singular value decomposition (SVD) are used to identify the primary modes of decadal and multidecadal variability in annual global Palmer Drought Severity Index (PDSI) values and sea-surface temperature (SSTs). The PDSI and SST data for 1925-2003 were detrended and smoothed (with a 10-year moving average) to isolate the decadal and multidecadal variability. The first two principal components (PCs) of the PDSI PCA explained almost 38% of the decadal and multidecadal variance in the detrended and smoothed global annual PDSI data. The first two PCs of detrended and smoothed global annual SSTs explained nearly 56% of the decadal variability in global SSTs. The PDSI PCs and the SST PCs are directly correlated in a pairwise fashion. The first PDSI and SST PCs reflect variability of the detrended and smoothed annual Pacific Decadal Oscillation (PDO), as well as detrended and smoothed annual Indian Ocean SSTs. The second set of PCs is strongly associated with the Atlantic Multidecadal Oscillation (AMO). The SVD analysis of the cross-covariance of the PDSI and SST data confirmed the close link between the PDSI and SST modes of decadal and multidecadal variation and provided a verification of the PCA results. These findings indicate that the major modes of multidecadal variations in SSTs and land-surface climate conditions are highly interrelated through a small number of spatially complex but slowly varying teleconnections. Therefore, these relations may be adaptable to providing improved baseline conditions for seasonal climate forecasting. Published in 2006 by John Wiley & Sons, Ltd.

Mode structure of a quantum cascade laser

NASA Astrophysics Data System (ADS)

Bogdanov, A. A.; Suris, R. A.

2011-03-01

We analyze the mode structure of a quantum cascade laser (QCL) cavity considering the surface plasmon-polariton modes and familiar modes of hollow resonator jointly, within a single model. We present a comprehensive mode structure analysis of the laser cavity, varying its geometric parameters and free electron concentration inside cavity layers within a wide range. Our analysis covers, in particular, the cases of metal-insulator-metal and insulator-metal-insulator waveguides. We discuss the phenomenon of negative dispersion for eigenmodes in detail and explain the nature of this phenomenon. We specify a waveguide parameters domain in which negative dispersion exists. The mode structure of QCL cavity is considered in the case of the anisotropic electrical properties of the waveguide materials. We show that anisotropy of the waveguide core results in propagation of Langmuir modes that are degenerated in the case of the isotropic core. Comparative analysis of optical losses due to free carrier absorption is presented for different modes within the frequency range from terahertz to ultraviolet frequencies.

The interplay of internal and forced modes of Hadley Cell expansion: lessons from the global warming hiatus

NASA Astrophysics Data System (ADS)

Amaya, Dillon J.; Siler, Nicholas; Xie, Shang-Ping; Miller, Arthur J.

2017-09-01

The poleward branches of the Hadley Cells and the edge of the tropics show a robust poleward shift during the satellite era, leading to concerns over the possible encroachment of the globe's subtropical dry zones into currently temperate climates. The extent to which this trend is caused by anthropogenic forcing versus internal variability remains the subject of considerable debate. In this study, we use a Joint EOF method to identify two distinct modes of tropical width variability: (1) an anthropogenically-forced mode, which we identify using a 20-member simulation of the historical climate, and (2) an internal mode, which we identify using a 1000-year pre-industrial control simulation. The forced mode is found to be closely related to the top of the atmosphere radiative imbalance and exhibits a long-term trend since 1860, while the internal mode is essentially indistinguishable from the El Niño Southern Oscillation. Together these two modes explain an average of 70% of the interannual variability seen in model "edge indices" over the historical period. Since 1980, the superposition of forced and internal modes has resulted in a period of accelerated Hadley Cell expansion and decelerated global warming (i.e., the "hiatus"). A comparison of the change in these modes since 1980 indicates that by 2013 the signal has emerged above the noise of internal variability in the Southern Hemisphere, but not in the Northern Hemisphere, with the latter also exhibiting strong zonal asymmetry, particularly in the North Atlantic. Our results highlight the important interplay of internal and forced modes of tropical width change and improve our understanding of the interannual variability and long-term trend seen in observations.

Three modes of interdecadal trends in sea surface temperature and sea surface height

NASA Astrophysics Data System (ADS)

Gnanadesikan, A.; Pradal, M.

2013-12-01

It might be thought that sea surface height and sea surface temperature would be tightly related. We show that this is not necessarily the case on a global scale. We analysed this relationship in a suite of coupled climate models run under 1860 forcing conditions. The models are low-resolution variants of the GFDL Earth System Model, reported in Galbraith et al. (J. Clim. 2011). 1. Correlated changes in global sea surface height and global sea surface temperature. This mode corresponds to opening and closing of convective chimneys in the Southern Ocean. As the Southern Ocean destratifies, sea ice formation is suppressed during the winter and more heat is taken up during the summer. This mode of variability is highly correlated with changes in the top of the atmosphere radiative budget and weakly correlated with changes in the deep ocean circulation. 2. Uncorrelated changes in global sea surface height and global sea surface temperature. This mode of variability is associated with interdecadal variabliity in tropical winds. Changes in the advective flux of heat to the surface ocean play a critical role in driving these changes, which also result in significant local changes in sea level. Changes sea ice over the Southern Ocean still result in changes in solar absorption, but these are now largely cancelled by changes in outgoing longwave radiation. 3. Anticorrelated changes in global sea surface height and global sea surface temperatures. By varying the lateral diffusion coefficient in the ocean model, we are able to enhance and suppress convection in the Southern and Northern Pacific Oceans. Increasing the lateral diffusion coefficients shifts the balance sources of deep water away from the warm salty deep water of the North Atlantic and towards cold fresh deep water from the other two regions. As a result, even though the planet as a whole warms, the deep ocean cools and sea level falls, with changes of order 30 cm over 500 years. The increase in solar absorption in polar regions is more than compensated by an increase in outgoing longwave radiation. Relationship between global SSH trend over a decade and (A) local SSH change over a decade (m/m). (B) Global SST change over a decade (m/K) (C) Portion of decadal SST change correlated with net radiation at the top of the atmosphere (m/K) (D) Portion of decadal SST change not correlated with net radiation at the top of the atmosphere.

Magnetic curvature effects on plasma interchange turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, B., E-mail: bli@pku.edu.cn; Liao, X.; Sun, C. K.

2016-06-15

The magnetic curvature effects on plasma interchange turbulence and transport in the Z-pinch and dipole-like systems are explored with two-fluid global simulations. By comparing the transport levels in the systems with a different magnetic curvature, we show that the interchange-mode driven transport strongly depends on the magnetic geometry. For the system with large magnetic curvature, the pressure and density profiles are strongly peaked in a marginally stable state and the nonlinear evolution of interchange modes produces the global convective cells in the azimuthal direction, which lead to the low level of turbulent convective transport.

Nonlinear analysis of solar cycles

NASA Astrophysics Data System (ADS)

Serre, T.; Nesme-Ribes, E.

2000-08-01

In this paper, the recent improvement of the Wolf sunspot time-series by Hoyt and co-workers has been analysed with the Global Flow Reconstruction (GFR) method (Serre et al. 1996a and b). A nonlinear 4-dimensional chaotic model has been extracted from the data which captures the principal characteristic features of the sunspot group time-series. The hypothesis of interactions between magnetic modes is implicitly tested; presumably, this is the cause of the irregular variations of solar cycle amplitudes recorded since the year 1610. The present results indicate that interactions are occurring between few global magnetic modes.

Parasitic modes removal out of operating mode neighbourhood in the DAW accelerating structure

DOE Office of Scientific and Technical Information (OSTI.GOV)

Andreev, V.G.; Belugin, V.M.; Esin, S.K.

1983-08-01

The disk and washer (DAW) accelerating structure finds its use in a number of new projects (PIGMI, SNQ etc ). It composes the main part of the accelerating structure of the meson factory now under construction in the Institute for Nuclear Research (INR), Moscow. It is known that the parasitic modes with azimuthal field variations exist at the operating mode region. In this report different methods of the parasitic modes frequency shift are considered. The main attention is given to the resonant methods, which are the most efficient.

Global and system-specific resting-state fMRI fluctuations are uncorrelated: principal component analysis reveals anti-correlated networks.

PubMed

Carbonell, Felix; Bellec, Pierre; Shmuel, Amir

2011-01-01

The influence of the global average signal (GAS) on functional-magnetic resonance imaging (fMRI)-based resting-state functional connectivity is a matter of ongoing debate. The global average fluctuations increase the correlation between functional systems beyond the correlation that reflects their specific functional connectivity. Hence, removal of the GAS is a common practice for facilitating the observation of network-specific functional connectivity. This strategy relies on the implicit assumption of a linear-additive model according to which global fluctuations, irrespective of their origin, and network-specific fluctuations are super-positioned. However, removal of the GAS introduces spurious negative correlations between functional systems, bringing into question the validity of previous findings of negative correlations between fluctuations in the default-mode and the task-positive networks. Here we present an alternative method for estimating global fluctuations, immune to the complications associated with the GAS. Principal components analysis was applied to resting-state fMRI time-series. A global-signal effect estimator was defined as the principal component (PC) that correlated best with the GAS. The mean correlation coefficient between our proposed PC-based global effect estimator and the GAS was 0.97±0.05, demonstrating that our estimator successfully approximated the GAS. In 66 out of 68 runs, the PC that showed the highest correlation with the GAS was the first PC. Since PCs are orthogonal, our method provides an estimator of the global fluctuations, which is uncorrelated to the remaining, network-specific fluctuations. Moreover, unlike the regression of the GAS, the regression of the PC-based global effect estimator does not introduce spurious anti-correlations beyond the decrease in seed-based correlation values allowed by the assumed additive model. After regressing this PC-based estimator out of the original time-series, we observed robust anti-correlations between resting-state fluctuations in the default-mode and the task-positive networks. We conclude that resting-state global fluctuations and network-specific fluctuations are uncorrelated, supporting a Resting-State Linear-Additive Model. In addition, we conclude that the network-specific resting-state fluctuations of the default-mode and task-positive networks show artifact-free anti-correlations.

Uncertainty in Modeling Dust Mass Balance and Radiative Forcing from Size Parameterization

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhao, Chun; Chen, Siyu; Leung, Lai-Yung R.

2013-11-05

This study examines the uncertainties in simulating mass balance and radiative forcing of mineral dust due to biases in the aerosol size parameterization. Simulations are conducted quasi-globally (180oW-180oE and 60oS-70oN) using the WRF24 Chem model with three different approaches to represent aerosol size distribution (8-bin, 4-bin, and 3-mode). The biases in the 3-mode or 4-bin approaches against a relatively more accurate 8-bin approach in simulating dust mass balance and radiative forcing are identified. Compared to the 8-bin approach, the 4-bin approach simulates similar but coarser size distributions of dust particles in the atmosphere, while the 3-mode pproach retains more finemore » dust particles but fewer coarse dust particles due to its prescribed og of each mode. Although the 3-mode approach yields up to 10 days longer dust mass lifetime over the remote oceanic regions than the 8-bin approach, the three size approaches produce similar dust mass lifetime (3.2 days to 3.5 days) on quasi-global average, reflecting that the global dust mass lifetime is mainly determined by the dust mass lifetime near the dust source regions. With the same global dust emission (~6000 Tg yr-1), the 8-bin approach produces a dust mass loading of 39 Tg, while the 4-bin and 3-mode approaches produce 3% (40.2 Tg) and 25% (49.1 Tg) higher dust mass loading, respectively. The difference in dust mass loading between the 8-bin approach and the 4-bin or 3-mode approaches has large spatial variations, with generally smaller relative difference (<10%) near the surface over the dust source regions. The three size approaches also result in significantly different dry and wet deposition fluxes and number concentrations of dust. The difference in dust aerosol optical depth (AOD) (a factor of 3) among the three size approaches is much larger than their difference (25%) in dust mass loading. Compared to the 8-bin approach, the 4-bin approach yields stronger dust absorptivity, while the 3-mode approach yields weaker dust absorptivity. Overall, on quasi-global average, the three size parameterizations result in a significant difference of a factor of 2~3 in dust surface cooling (-1.02~-2.87 W m-2) and atmospheric warming (0.39~0.96 W m-2) and in a tremendous difference of a factor of ~10 in dust TOA cooling (-0.24~-2.20 W m-2). An uncertainty of a factor of 2 is quantified in dust emission estimation due to the different size parameterizations. This study also highlights the uncertainties in modeling dust mass and number loading, deposition fluxes, and radiative forcing resulting from different size parameterizations, and motivates further investigation of the impact of size parameterizations on modeling dust impacts on air quality, climate, and ecosystem.« less

Toward a new architecture for global mental health.

PubMed

Kirmayer, Laurence J; Pedersen, Duncan

2014-12-01

Current efforts in global mental health (GMH) aim to address the inequities in mental health between low-income and high-income countries, as well as vulnerable populations within wealthy nations (e.g., indigenous peoples, refugees, urban poor). The main strategies promoted by the World Health Organization (WHO) and other allies have been focused on developing, implementing, and evaluating evidence-based practices that can be scaled up through task-shifting and other methods to improve access to services or interventions and reduce the global treatment gap for mental disorders. Recent debates on global mental health have raised questions about the goals and consequences of current approaches. Some of these critiques emphasize the difficulties and potential dangers of applying Western categories, concepts, and interventions given the ways that culture shapes illness experience. The concern is that in the urgency to address disparities in global health, interventions that are not locally relevant and culturally consonant will be exported with negative effects including inappropriate diagnoses and interventions, increased stigma, and poor health outcomes. More fundamentally, exclusive attention to mental disorders identified by psychiatric nosologies may shift attention from social structural determinants of health that are among the root causes of global health disparities. This paper addresses these critiques and suggests how the GMH movement can respond through appropriate modes of community-based practice and ongoing research, while continuing to work for greater equity and social justice in access to effective, socially relevant, culturally safe and appropriate mental health care on a global scale. © The Author(s) 2014 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

The Arteries of Global Trade: Industrial Restructuring and Technological Change in the Transatlantic Air Cargo Industry

ERIC Educational Resources Information Center

Schwarz, Guido

2010-01-01

Air cargo enjoys a special importance: together with maritime transport it is the backbone of global trade and is indispensable for contemporary globalization. Air transport is the only mode that combines worldwide reach with high speed. Nonetheless there is a dearth of geographic research that analyzes the current restructuring affecting the air…

The tropospheric emission spectrometer (TES) for the Earth Observing System (EOS)

NASA Technical Reports Server (NTRS)

Beer, R.

1992-01-01

In recent years, increasing concern has been expressed about Global Change - the natural and anthropogenic alteration of the Earth's environment involving global greenhouse warming and the associated climate change, urban and regional atmospheric pollution, acid deposition, regional increases in tropospheric zone, and the decrease in stratospheric ozone. A common theme among these problems is that they all involve those tropospheric trace gases which are fundamental to the biosphere-troposphere interaction, the chemistry of the free troposphere itself, and troposphere-stratosphere exchange. The chemical species involved all have spectral signatures within the near and mid infrared that can now be measured by advanced techniques of remote-sensing infrared spectroradiometry. Such a system is the Tropospheric Emission Spectrometer (TES), now in Phase B definition for the Earth Observing System (EOS) polar platforms. TES addresses these objectives by obtaining radiometrically calibrated, linewidth-limited spectral resolution, infrared spectra of the lower atmosphere using both natural thermal emission and reflected sunlight (where appropriate) in three different, but fully programmable, modes: a gobal mode, a pointed mode, and a limb-viewing mode. The goals of TES, its instrumentation, operational modes, sensitivity and data handling are discussed.

The development of GPU-based parallel PRNG for Monte Carlo applications in CUDA Fortran

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kargaran, Hamed, E-mail: h-kargaran@sbu.ac.ir; Minuchehr, Abdolhamid; Zolfaghari, Ahmad

The implementation of Monte Carlo simulation on the CUDA Fortran requires a fast random number generation with good statistical properties on GPU. In this study, a GPU-based parallel pseudo random number generator (GPPRNG) have been proposed to use in high performance computing systems. According to the type of GPU memory usage, GPU scheme is divided into two work modes including GLOBAL-MODE and SHARED-MODE. To generate parallel random numbers based on the independent sequence method, the combination of middle-square method and chaotic map along with the Xorshift PRNG have been employed. Implementation of our developed PPRNG on a single GPU showedmore » a speedup of 150x and 470x (with respect to the speed of PRNG on a single CPU core) for GLOBAL-MODE and SHARED-MODE, respectively. To evaluate the accuracy of our developed GPPRNG, its performance was compared to that of some other commercially available PPRNGs such as MATLAB, FORTRAN and Miller-Park algorithm through employing the specific standard tests. The results of this comparison showed that the developed GPPRNG in this study can be used as a fast and accurate tool for computational science applications.« less

System for determining the angle of impact of an object on a structure

NASA Technical Reports Server (NTRS)

Prosser, William H. (Inventor); Gorman, Michael R. (Inventor)

1993-01-01

A method for determining the angle of impact of an object on a thin-walled structure which determines the angle of impact through analysis of the acoustic waves which result when an object impacts a structure is presented. Transducers are placed on and in the surface of the structure which sense the wave caused in the structure by impact. The waves are recorded and saved for analysis. For source motion normal to the surface, the antisymmetric mode has a large amplitude while that of the symmetric mode is very small. As the source angle increases with respect to the surface normal, the symmetric mode amplitude increases while the antisymmetric mode amplitude decreases. Thus, the angle of impact is determined by measuring the relative amplitudes of these two lowest order modes.

FLEXAN (version 2.0) user's guide

NASA Technical Reports Server (NTRS)

Stallcup, Scott S.

1989-01-01

The FLEXAN (Flexible Animation) computer program, Version 2.0 is described. FLEXAN animates 3-D wireframe structural dynamics on the Evans and Sutherland PS300 graphics workstation with a VAX/VMS host computer. Animation options include: unconstrained vibrational modes, mode time histories (multiple modes), delta time histories (modal and/or nonmodal deformations), color time histories (elements of the structure change colors through time), and rotational time histories (parts of the structure rotate through time). Concurrent color, mode, delta, and rotation, time history animations are supported. FLEXAN does not model structures or calculate the dynamics of structures; it only animates data from other computer programs. FLEXAN was developed to aid in the study of the structural dynamics of spacecraft.

The mental representations of fractions: adults' same–different judgments

PubMed Central

Gabriel, Florence; Szucs, Denes; Content, Alain

2013-01-01

Two experiments examined whether the processing of the magnitude of fractions is global or componential. Previously, some authors concluded that adults process the numerators and denominators of fractions separately and do not access the global magnitude of fractions. Conversely, others reported evidence suggesting that the global magnitude of fractions is accessed. We hypothesized that in a fraction matching task, participants automatically extract the magnitude of the components but that the activation of the global magnitude of the whole fraction is only optional or strategic. Participants carried out same/different judgment tasks. Two different tasks were used: a physical matching task and a numerical matching task. Pairs of fractions were presented either simultaneously or sequentially. Results showed that participants only accessed the representation of the global magnitude of fractions in the numerical matching task. The mode of stimulus presentation did not affect the processing of fractions. The present study allows a deeper understanding of the conditions in which the magnitude of fractions is mentally represented by using matching tasks and two different modes of presentation. PMID:23847562

Thermodynamics of Radiation Modes

ERIC Educational Resources Information Center

Pina, Eduardo; de la Selva, Sara Maria Teresa

2010-01-01

We study the equilibrium thermodynamics of the electromagnetic radiation in a cavity of a given volume and temperature. We found three levels of description, the thermodynamics of one mode, the thermodynamics of the distribution of frequencies in a band by summing over the frequencies in it and the global thermodynamics by summing over all the…

Quantitative Assessment of the Integrated Response in Global Heat and Moisture Budgets to Changing Solar Irradiance

NASA Technical Reports Server (NTRS)

White, Warren B.; Cayan, Daniel R.; Dettinger, Michael; Sharber, James (Technical Monitor)

2001-01-01

Earlier, we found time sequences of basin- and global-average upper ocean temperature (that is, diabatic heat storage above the main pycnocline) for 40 years from 1955-1994 and of sea surface temperature for 95 years from 1900-1994 associated with changes in the Sun's radiative forcing on decadal and interdecadal timescales, lagging by 10 deg.- 30 deg. of phase and confined to the upper 60-120 m. Yet, the observed changes in upper ocean temperature (approx. 0.1 K) were approximately twice those expected from the Stefan-Boltzmann black-body radiation law for the Earth's surface, with phase lags (0 deg. to 30 deg. of phase) much shorter than the 90 deg. phase shift expected as well. Moreover, White et al. (1997, 1998) found the Earth's global decadal mode in covarying SST and SLP anomalies phase locked to the decadal signal in the Sun's irradiance. Yet, Allan (2000) found this decadal signal also characterized by patterns similar to those observed on biennial and interannual time scales; that is, the Troposphere Biennial Oscillation (TBO) and the El Nino and the Southern Oscillation (ENSO). This suggested that small changes in the Sun's total irradiance could excite this global decadal mode in the Earth's ocean-atmosphere-terrestrial system similar to those excited internally on biennial and interannual period scales. This is a significant finding, proving that energy budget models (that is, models based on globally-averaged radiation balances) yield unrealistic responses. Thus, the true response must include positive and negative feedbacks in the Earth's ocean-atmosphere-terrestrial system as its internal mode (that is, the natural mode of the system) respond in damped resonance to quasi-periodic decadal changes in the Sun's irradiance. Moreover, these responses are not much different from those occurring internally on biennial and interannual period scales.

Sea level reconstructions from altimetry and tide gauges using independent component analysis

NASA Astrophysics Data System (ADS)

Brunnabend, Sandra-Esther; Kusche, Jürgen; Forootan, Ehsan

2017-04-01

Many reconstructions of global and regional sea level rise derived from tide gauges and satellite altimetry used the method of empirical orthogonal functions (EOF) to reduce noise, improving the spatial resolution of the reconstructed outputs and investigate the different signals in climate time series. However, the second order EOF method has some limitations, e.g. in the separation of individual physical signals into different modes of sea level variations and in the capability to physically interpret the different modes as they are assumed to be orthogonal. Therefore, we investigate the use of the more advanced statistical signal decomposition technique called independent component analysis (ICA) to reconstruct global and regional sea level change from satellite altimetry and tide gauge records. Our results indicate that the used method has almost no influence on the reconstruction of global mean sea level change (1.6 mm/yr from 1960-2010 and 2.9 mm/yr from 1993-2013). Only different numbers of modes are needed for the reconstruction. Using the ICA method is advantageous for separating independent climate variability signals from regional sea level variations as the mixing problem of the EOF method is strongly reduced. As an example, the modes most dominated by the El Niño-Southern Oscillation (ENSO) signal are compared. Regional sea level changes near Tianjin, China, Los Angeles, USA, and Majuro, Marshall Islands are reconstructed and the contributions from ENSO are identified.

A fungal biofilm reactor based on metal structured packing improves the quality of a Gla::GFP fusion protein produced by Aspergillus oryzae.

PubMed

Zune, Q; Delepierre, A; Gofflot, S; Bauwens, J; Twizere, J C; Punt, P J; Francis, F; Toye, D; Bawin, T; Delvigne, F

2015-08-01

Fungal biofilm is known to promote the excretion of secondary metabolites in accordance with solid-state-related physiological mechanisms. This work is based on the comparative analysis of classical submerged fermentation with a fungal biofilm reactor for the production of a Gla::green fluorescent protein (GFP) fusion protein by Aspergillus oryzae. The biofilm reactor comprises a metal structured packing allowing the attachment of the fungal biomass. Since the production of the target protein is under the control of the promoter glaB, specifically induced in solid-state fermentation, the biofilm mode of culture is expected to enhance the global productivity. Although production of the target protein was enhanced by using the biofilm mode of culture, we also found that fusion protein production is also significant when the submerged mode of culture is used. This result is related to high shear stress leading to biomass autolysis and leakage of intracellular fusion protein into the extracellular medium. Moreover, 2-D gel electrophoresis highlights the preservation of fusion protein integrity produced in biofilm conditions. Two fungal biofilm reactor designs were then investigated further, i.e. with full immersion of the packing or with medium recirculation on the packing, and the scale-up potentialities were evaluated. In this context, it has been shown that full immersion of the metal packing in the liquid medium during cultivation allows for a uniform colonization of the packing by the fungal biomass and leads to a better quality of the fusion protein.

Shuttle structural dynamics characteristics: The analysis and verification

NASA Technical Reports Server (NTRS)

Modlin, C. T., Jr.; Zupp, G. A., Jr.

1985-01-01

The space shuttle introduced a new dimension in the complexity of the structural dynamics of a space vehicle. The four-body configuration exhibited structural frequencies as low as 2 hertz with a model density on the order of 10 modes per hertz. In the verification process, certain mode shapes and frequencies were identified by the users as more important than others and, as such, the test objectives were oriented toward experimentally extracting those modes and frequencies for analysis and test correlation purposes. To provide the necessary experimental data, a series of ground vibration tests (GVT's) was conducted using test articles ranging from the 1/4-scale structural replica of the space shuttle to the full-scale vehicle. The vibration test and analysis program revealed that the mode shapes and frequency correlations below 10 hertz were good. The quality of correlation of modes between 10 and 20 hertz ranged from good to fair and that of modes above 20 hertz ranged from poor to good. Since the most important modes, based on user preference, were below 10 hertz, it was judged that the shuttle structural dynamic models were adequate for flight certifications.

Bias field tunable magnetic configuration and magnetization dynamics in Ni80Fe20 nano-cross structures with varying arm length

NASA Astrophysics Data System (ADS)

Adhikari, K.; Choudhury, S.; Mandal, R.; Barman, S.; Otani, Y.; Barman, A.

2017-01-01

Ferromagnetic nano-cross structures promise exotic static magnetic configurations and very rich and tunable magnetization dynamics leading towards potential applications in magnetic logic and communication devices. Here, we report an experimental study of external magnetic field tunable static magnetic configurations and magnetization dynamics in Ni80Fe20 nano-cross structures with varying arm lengths (L). Broadband ferromagnetic resonance measurements showed a strong variation in the number of spin-wave (SW) modes and mode frequencies (f) with bias field magnitude (H). Simulated static magnetic configurations and SW mode profiles explain the rich variation of the SW spectra, including mode softening, mode crossover, mode splitting, and mode merging. Such variation of SW spectra is further modified by the size of the nano-cross. Remarkably, with decreasing arm length of nano-cross structures, the onion magnetization ground state becomes more stable. Calculated magnetostatic field distributions support the above observations and revealed the non-collective nature of the dynamics in closely packed nano-cross structures. The latter is useful for their possible applications in magnetic storage and memory devices.

Sensitivity of aerosol radiative forcing efficiency to the coarse mode contributions across aerosol regimes

NASA Astrophysics Data System (ADS)

McComiskey, A. C.; Telg, H.; Sheridan, P. J.; Kassianov, E.

2017-12-01

The coarse mode contribution to the aerosol radiative effect in a range of clean and turbid aerosol regimes has not been well quantified. While the coarse-mode radiative effect in turbid conditions is generally assumed to be consequential, the effect in clean conditions has likely been underestimated. We survey ground-based in situ measurements of the coarse mode fraction of aerosol optical properties measured around the globe over the past 20 years by the DOE Atmospheric Radiation Measurement Facility and the NOAA Global Monitoring Division. The aerosol forcing efficiency is presented, allowing an evaluation of where the aerosol coarse mode might be climatologically significant.

Assessment of Template-Based Modeling of Protein Structure in CASP11

PubMed Central

Modi, Vivek; Xu, Qifang; Adhikari, Sam; Dunbrack, Roland L.

2016-01-01

We present the assessment of predictions submitted in the template-based modeling (TBM) category of CASP11 (Critical Assessment of Protein Structure Prediction). Model quality was judged on the basis of global and local measures of accuracy on all atoms including side chains. The top groups on 39 human-server targets based on model 1 predictions were LEER, Zhang, LEE, MULTICOM, and Zhang-Server. The top groups on 81 targets by server groups based on model 1 predictions were Zhang-Server, nns, BAKER-ROSETTASERVER, QUARK, and myprotein-me. In CASP11, the best models for most targets were equal to or better than the best template available in the Protein Data Bank, even for targets with poor templates. The overall performance in CASP11 is similar to the performance of predictors in CASP10 with slightly better performance on the hardest targets. For most targets, assessment measures exhibited bimodal probability density distributions. Multi-dimensional scaling of an RMSD matrix for each target typically revealed a single cluster with models similar to the target structure, with a mode in the GDT-TS density between 40 and 90, and a wide distribution of models highly divergent from each other and from the experimental structure, with density mode at a GDT-TS value of ~20. The models in this peak in the density were either compact models with entirely the wrong fold, or highly non-compact models. The results argue for a density-driven approach in future CASP TBM assessments that accounts for the bimodal nature of these distributions instead of Z-scores, which assume a unimodal, Gaussian distribution. PMID:27081927

Mean flow generation mechanism by inertial waves and normal modes

NASA Astrophysics Data System (ADS)

Will, Andreas; Ghasemi, Abouzar

2016-04-01

The mean flow generation mechanism by nonlinearity of the inertial normal modes and inertial wave beams in a rotating annular cavity with longitudinally librating walls in stable regime is discussed. Inertial normal modes (standing waves) are excited when libration frequency matches eigenfrequencies of the system. Inertial wave beams are produced by Ekman pumping and suction in a rotating cylinder and form periodic orbits or periodic ray trajectories at selected frequencies. Inertial wave beams emerge as concentrated shear layers in a librating annular cavity, while normal modes appear as global recirculation cells. Both (inertial wave beam and mode) are helical and thus intrinsically non-linear flow structures. No second mode or wave is necessary for non-linearity. We considered the low order normal modes (1,1), (2,1) and (2,2) which are expected to be excited in the planetary objects and investigate the mean flow generation mechanism using two independent solutions: 1) analytical solution (Borcia 2012) and 2) the wave component of the flow (ω0 component) obtained from the direct numerical simulation (DNS). It is well known that a retrograde bulk mean flow is generated by the Ekman boundary layer and E1/4-Stewartson layer close to the outer cylinder side wall due to libration. At and around the normal mode resonant frequencies we found additionally a prograde azimuthal mean flow (Inertial Normal Mode Mean Flow: INMMF) in the bulk of the fluid. The fluid in the bulk is in geostrophic balance in the absence of the inertial normal modes. However, when INMMF is excited, we found that the geostrophic balance does not hold in the region occupied by INMMF. We hypothesize that INMMF is generated by the nonlinearity of the normal modes or by second order effects. Expanding the velocity {V}(u_r,u_θ,u_z) and pressure (p) in a power series in ɛ (libration amplitude), the Navier-Stokes equations are segregated into the linear and nonlinear parts at orders ɛ1 and ɛ^2, respectively. The former is used to find the analytical solution of the normal modes (Borcia 2012). Plugging two independent solutions into the latter we investigate the generation mechanism of INMMF. We found R1^1=overbar{partial_z(u_r1 u_z^1)}, R2^1=overbar{partial_r(u_r1 u_r^1)} as source terms responsible for the generation of INMMF. The helical structure of the inertial waves causes the nonlinear terms R1 and R2 to be nonzero, contributing to the generation of INMMF. We used u_ra and u_za obtained from the analytical solution (Borcia 2012) and computed the source terms R1a and R2a and found a structural correspondence with the corresponding field computed from the DNS solution for the three normal modes investigated. The sum of R11 and R21 exhibits a good structural correspondence with INMMF. Interestingly, INMMF magnitude depends on the inertial wave beams and normal modes. For instance we found that INMMF is generated more efficiently for the libration frequency ω=1.58, although the resonant frequency is predicted by the analytical solution to be at ω=1.576 (normal mode (2,1)). Separating the inertial wave beams from the flow field obtained by DNS, using the analytical normal mode solution, we explored the phase lag between inertial wave beams and normal mode. We inferred that the normal mode amplitude is high only if the phase lag between the inertial wave beam and the normal mode is predominantly positive. In this case a high amplitude INMMF amplitude can be found. This supports the hypothesis that the normal modes are generated by the inertial wave beam in analogy to resonant forcing in classical mechanics. Interestingly, the 'optimum' phase lag found is much smaller than π/2. {Acknowledgement:} This work is a part of the project "Mischung und Grundstromanregung durch propagierende Trgheitswellen: Theorie, Experiment und Simulation" supported by the German Science Foundation (DFG). We would like to thank M. Klein, U. Harlander, I. Borcia and E. Schaller for helpful discussions and invaluable contributions. {References:} Borcia, I. D. & Harlander, U. 2012 Inertial waves in a rotating annulus with inclined inner cylinder: comparing the spectrum of wave attractor frequency bands and the eigenspectrum in the limit of zero inclination. Theor. Comput. Fluid Dyn. 27, 397-413.

Numerical Analysis of Crack Tip Plasticity and History Effects under Mixed Mode Conditions

NASA Astrophysics Data System (ADS)

Lopez-Crespo, Pablo; Pommier, Sylvie

The plastic behaviour in the crack tip region has a strong influence on the fatigue life of engineering components. In general, residual stresses developed as a consequence of the plasticity being constrained around the crack tip have a significant role on both the direction of crack propagation and the propagation rate. Finite element methods (FEM) are commonly employed in order to model plasticity. However, if millions of cycles need to be modelled to predict the fatigue behaviour of a component, the method becomes computationally too expensive. By employing a multiscale approach, very precise analyses computed by FEM can be brought to a global scale. The data generated using the FEM enables us to identify a global cyclic elastic-plastic model for the crack tip region. Once this model is identified, it can be employed directly, with no need of additional FEM computations, resulting in fast computations. This is done by partitioning local displacement fields computed by FEM into intensity factors (global data) and spatial fields. A Karhunen-Loeve algorithm developed for image processing was employed for this purpose. In addition, the partitioning is done such as to distinguish into elastic and plastic components. Each of them is further divided into opening mode and shear mode parts. The plastic flow direction was determined with the above approach on a centre cracked panel subjected to a wide range of mixed-mode loading conditions. It was found to agree well with the maximum tangential stress criterion developed by Erdogan and Sih, provided that the loading direction is corrected for residual stresses. In this approach, residual stresses are measured at the global scale through internal intensity factors.

Entangled singularity patterns of photons in Ince-Gauss modes

NASA Astrophysics Data System (ADS)

Krenn, Mario; Fickler, Robert; Huber, Marcus; Lapkiewicz, Radek; Plick, William; Ramelow, Sven; Zeilinger, Anton

2013-01-01

Photons with complex spatial mode structures open up possibilities for new fundamental high-dimensional quantum experiments and for novel quantum information tasks. Here we show entanglement of photons with complex vortex and singularity patterns called Ince-Gauss modes. In these modes, the position and number of singularities vary depending on the mode parameters. We verify two-dimensional and three-dimensional entanglement of Ince-Gauss modes. By measuring one photon and thereby defining its singularity pattern, we nonlocally steer the singularity structure of its entangled partner, while the initial singularity structure of the photons is undefined. In addition we measure an Ince-Gauss specific quantum-correlation function with possible use in future quantum communication protocols.

Tomography and Purification of the Temporal-Mode Structure of Quantum Light

NASA Astrophysics Data System (ADS)

Ansari, Vahid; Donohue, John M.; Allgaier, Markus; Sansoni, Linda; Brecht, Benjamin; Roslund, Jonathan; Treps, Nicolas; Harder, Georg; Silberhorn, Christine

2018-05-01

High-dimensional quantum information processing promises capabilities beyond the current state of the art, but addressing individual information-carrying modes presents a significant experimental challenge. Here we demonstrate effective high-dimensional operations in the time-frequency domain of nonclassical light. We generate heralded photons with tailored temporal-mode structures through the pulse shaping of a broadband parametric down-conversion pump. We then implement a quantum pulse gate, enabled by dispersion-engineered sum-frequency generation, to project onto programmable temporal modes, reconstructing the quantum state in seven dimensions. We also manipulate the time-frequency structure by selectively removing temporal modes, explicitly demonstrating the effectiveness of engineered nonlinear processes for the mode-selective manipulation of quantum states.

Divergent structural brain abnormalities between different genetic subtypes of children with Prader-Willi syndrome.

PubMed

Lukoshe, Akvile; White, Tonya; Schmidt, Marcus N; van der Lugt, Aad; Hokken-Koelega, Anita C

2013-10-22

Prader-Willi syndrome (PWS) is a complex neurogenetic disorder with symptoms that indicate not only hypothalamic, but also a global, central nervous system (CNS) dysfunction. However, little is known about developmental differences in brain structure in children with PWS. Thus, our aim was to investigate global brain morphology in children with PWS, including the comparison between different genetic subtypes of PWS. In addition, we performed exploratory cortical and subcortical focal analyses. High resolution structural magnetic resonance images were acquired in 20 children with genetically confirmed PWS (11 children carrying a deletion (DEL), 9 children with maternal uniparental disomy (mUPD)), and compared with 11 age- and gender-matched typically developing siblings as controls. Brain morphology measures were obtained using the FreeSurfer software suite. Both children with DEL and mUPD showed smaller brainstem volume, and a trend towards smaller cortical surface area and white matter volume. Children with mUPD had enlarged lateral ventricles and larger cortical cerebrospinal fluid (CSF) volume. Further, a trend towards increased cortical thickness was found in children with mUPD. Children with DEL had a smaller cerebellum, and smaller cortical and subcortical grey matter volumes. Focal analyses revealed smaller white matter volumes in left superior and bilateral inferior frontal gyri, right cingulate cortex, and bilateral precuneus areas associated with the default mode network (DMN) in children with mUPD. Children with PWS show signs of impaired brain growth. Those with mUPD show signs of early brain atrophy. In contrast, children with DEL show signs of fundamentally arrested, although not deviant brain development and presented few signs of cortical atrophy. Our results of global brain measurements suggest divergent neurodevelopmental patterns in children with DEL and mUPD.

Divergent structural brain abnormalities between different genetic subtypes of children with Prader–Willi syndrome

PubMed Central

2013-01-01

Background Prader–Willi syndrome (PWS) is a complex neurogenetic disorder with symptoms that indicate not only hypothalamic, but also a global, central nervous system (CNS) dysfunction. However, little is known about developmental differences in brain structure in children with PWS. Thus, our aim was to investigate global brain morphology in children with PWS, including the comparison between different genetic subtypes of PWS. In addition, we performed exploratory cortical and subcortical focal analyses. Methods High resolution structural magnetic resonance images were acquired in 20 children with genetically confirmed PWS (11 children carrying a deletion (DEL), 9 children with maternal uniparental disomy (mUPD)), and compared with 11 age- and gender-matched typically developing siblings as controls. Brain morphology measures were obtained using the FreeSurfer software suite. Results Both children with DEL and mUPD showed smaller brainstem volume, and a trend towards smaller cortical surface area and white matter volume. Children with mUPD had enlarged lateral ventricles and larger cortical cerebrospinal fluid (CSF) volume. Further, a trend towards increased cortical thickness was found in children with mUPD. Children with DEL had a smaller cerebellum, and smaller cortical and subcortical grey matter volumes. Focal analyses revealed smaller white matter volumes in left superior and bilateral inferior frontal gyri, right cingulate cortex, and bilateral precuneus areas associated with the default mode network (DMN) in children with mUPD. Conclusions Children with PWS show signs of impaired brain growth. Those with mUPD show signs of early brain atrophy. In contrast, children with DEL show signs of fundamentally arrested, although not deviant brain development and presented few signs of cortical atrophy. Our results of global brain measurements suggest divergent neurodevelopmental patterns in children with DEL and mUPD. PMID:24144356

Development and applications of two computational procedures for determining the vibration modes of structural systems. [aircraft structures - aerospaceplanes

NASA Technical Reports Server (NTRS)

Kvaternik, R. G.

1975-01-01

Two computational procedures for analyzing complex structural systems for their natural modes and frequencies of vibration are presented. Both procedures are based on a substructures methodology and both employ the finite-element stiffness method to model the constituent substructures. The first procedure is a direct method based on solving the eigenvalue problem associated with a finite-element representation of the complete structure. The second procedure is a component-mode synthesis scheme in which the vibration modes of the complete structure are synthesized from modes of substructures into which the structure is divided. The analytical basis of the methods contains a combination of features which enhance the generality of the procedures. The computational procedures exhibit a unique utilitarian character with respect to the versatility, computational convenience, and ease of computer implementation. The computational procedures were implemented in two special-purpose computer programs. The results of the application of these programs to several structural configurations are shown and comparisons are made with experiment.

Western Pacific Hydroclimate Linked to Global Climate Variability Over the Past Two Millennia

NASA Technical Reports Server (NTRS)

Griffiths, Michael L.; Kimbrough, Alena K.; Gagan, Michael K.; Drysdale, Russell N.; Cole, Julia E.; Johnson, Kathleen R.; Zhao, Jian-Xin; Cook, Benjamin I.; Hellstrom, John C.; Hantoro, Wahyoe S.

2016-01-01

Interdecadal modes of tropical Pacific ocean-atmosphere circulation have a strong influence on global temperature, yet the extent to which these phenomena influence global climate on multicentury timescales is still poorly known. Here we present a 2,000-year, multiproxy reconstruction of western Pacific hydroclimate from two speleothem records for southeastern Indonesia. The composite record shows pronounced shifts in monsoon rainfall that are antiphased with precipitation records for East Asia and the central-eastern equatorial Pacific. These meridional and zonal patterns are best explained by a poleward expansion of the Australasian Intertropical Convergence Zone and weakening of the Pacific Walker circulation (PWC) between B1000 and 1500 CE Conversely, an equatorward contraction of the Intertropical Convergence Zone and strengthened PWC occurred between B1500 and 1900 CE. Our findings, together with climate model simulations, highlight the likelihood that century-scale variations in tropical Pacific climate modes can significantly modulate radiatively forced shifts in global temperature.

Global fast dynamic terminal sliding mode control for a quadrotor UAV.

PubMed

Xiong, Jing-Jing; Zhang, Guo-Bao

2017-01-01

A control method based on global fast dynamic terminal sliding mode control (TSMC) technique is proposed to design the flight controller for performing the finite-time position and attitude tracking control of a small quadrotor UAV. Firstly, the dynamic model of the quadrotor is divided into two subsystems, i.e., a fully actuated subsystem and an underactuated subsystem. Secondly, the dynamic flight controllers of the quadrotor are formulated based on global fast dynamic TSMC, which is able to guarantee that the position and velocity tracking errors of all system state variables converge to zero in finite-time. Moreover, the global fast dynamic TSMC is also able to eliminate the chattering phenomenon caused by the switching control action and realize the high precision performance. In addition, the stabilities of two subsystems are demonstrated by Lyapunov theory, respectively. Lastly, the simulation results are given to illustrate the effectiveness and robustness of the proposed control method in the presence of external disturbances. Copyright © 2016 ISA. Published by Elsevier Ltd. All rights reserved.

Chirping and Sudden Excitation of Energetic-Particle-Driven Geodesic Acoustic Modes in a Large Helical Device Experiment

NASA Astrophysics Data System (ADS)

Wang, Hao; Todo, Yasushi; Ido, Takeshi; Suzuki, Yasuhiro

2018-04-01

Energetic-particle-driven geodesic acoustic modes (EGAMs) observed in a Large Helical Device experiment are investigated using a hybrid simulation code for energetic particles interacting with a magnetohydrodynamic (MHD) fluid. The frequency chirping of the primary mode and the sudden excitation of the half-frequency secondary mode are reproduced for the first time with the hybrid simulation using the realistic physical condition and the three-dimensional equilibrium. Both EGAMs have global spatial profiles which are consistent with the experimental measurements. For the secondary mode, the bulk pressure perturbation and the energetic particle pressure perturbation cancel each other out, and thus the frequency is lower than the primary mode. It is found that the excitation of the secondary mode does not depend on the nonlinear MHD coupling. The secondary mode is excited by energetic particles that satisfy the linear and nonlinear resonance conditions, respectively, for the primary and secondary modes.

Chirping and Sudden Excitation of Energetic-Particle-Driven Geodesic Acoustic Modes in a Large Helical Device Experiment.

PubMed

Wang, Hao; Todo, Yasushi; Ido, Takeshi; Suzuki, Yasuhiro

2018-04-27

Energetic-particle-driven geodesic acoustic modes (EGAMs) observed in a Large Helical Device experiment are investigated using a hybrid simulation code for energetic particles interacting with a magnetohydrodynamic (MHD) fluid. The frequency chirping of the primary mode and the sudden excitation of the half-frequency secondary mode are reproduced for the first time with the hybrid simulation using the realistic physical condition and the three-dimensional equilibrium. Both EGAMs have global spatial profiles which are consistent with the experimental measurements. For the secondary mode, the bulk pressure perturbation and the energetic particle pressure perturbation cancel each other out, and thus the frequency is lower than the primary mode. It is found that the excitation of the secondary mode does not depend on the nonlinear MHD coupling. The secondary mode is excited by energetic particles that satisfy the linear and nonlinear resonance conditions, respectively, for the primary and secondary modes.

Correlation among far-infrared reflection modes, crystal structures and dielectric properties of Ba(Zn{sub 1/3}Nb{sub 2/3})O{sub 3}–CaTiO{sub 3} ceramics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shi, Feng, E-mail: sf751106@sina.com.cn; Sun, Haiqing; Liu, Hongquan

Highlights: • Crystal symmetry decreases with CT concentration from cubic to hexagonal structure. • Lattice constants as well as the ordered degree change with CT concentration. • Ordered structures turn from 1:1 to 1:2 ordering with change of crystal structures. • There is a correlation between FIR phonon modes and dielectric properties. • There is a correlation between FIR phonon modes and crystal structures. - Abstract: Ba(Zn{sub 1/3}Nb{sub 2/3})O{sub 3} (BZN)–CaTiO{sub 3} (CT) microwave dielectric ceramics were synthesized at 1395 °C for 4 h using conventional solid-state sintering technique with different CT contents. The ceramics were characterized by X-ray diffractionmore » (XRD) and far-infrared reflection (FIR) spectroscopy to evaluate correlations among crystal structures, dielectric properties, and infrared modes. XRD results showed that crystal symmetry decreased with increased CT concentration from cubic to hexagonal structure, and lattice constants and ordered degree changed accordingly. Ordered phases transformed from 1:1 to 1:2 ordered structure with crystal-structure change. FIR results demonstrated that two new IR active modes appeared at 300 cm{sup −1}, and another new mode appeared at 600 cm{sup −1} for the x ≥ 0.60 sample, which agreed with the change in crystal structures as confirmed by XRD results. Correlations between FIR modes and dielectric properties were established.« less

Intramolecular energy transfer and the driving mechanisms for large-amplitude collective motions of clusters

NASA Astrophysics Data System (ADS)

Yanao, Tomohiro; Koon, Wang Sang; Marsden, Jerrold E.

2009-04-01

This paper uncovers novel and specific dynamical mechanisms that initiate large-amplitude collective motions in polyatomic molecules. These mechanisms are understood in terms of intramolecular energy transfer between modes and driving forces. Structural transition dynamics of a six-atom cluster between a symmetric and an elongated isomer is highlighted as an illustrative example of what is a general message. First, we introduce a general method of hyperspherical mode analysis to analyze the energy transfer among internal modes of polyatomic molecules. In this method, the (3n-6) internal modes of an n-atom molecule are classified generally into three coarse level gyration-radius modes, three fine level twisting modes, and (3n-12) fine level shearing modes. We show that a large amount of kinetic energy flows into the gyration-radius modes when the cluster undergoes structural transitions by changing its mass distribution. Based on this fact, we construct a reactive mode as a linear combination of the three gyration-radius modes. It is shown that before the reactive mode acquires a large amount of kinetic energy, activation or inactivation of the twisting modes, depending on the geometry of the isomer, plays crucial roles for the onset of a structural transition. Specifically, in a symmetric isomer with a spherical mass distribution, activation of specific twisting modes drives the structural transition into an elongated isomer by inducing a strong internal centrifugal force, which has the effect of elongating the mass distribution of the system. On the other hand, in an elongated isomer, inactivation of specific twisting modes initiates the structural transition into a symmetric isomer with lower potential energy by suppressing the elongation effect of the internal centrifugal force and making the effects of the potential force dominant. This driving mechanism for reactions as well as the present method of hyperspherical mode analysis should be widely applicable to molecular reactions in which a system changes its overall mass distribution in a significant way.

Topological phonon modes in filamentary structures

NASA Astrophysics Data System (ADS)

Berg, Nina; Joel, Kira; Koolyk, Miriam; Prodan, Emil

2011-02-01

This work describes a class of topological phonon modes, that is, mechanical vibrations localized at the edges of special structures that are robust against the deformations of the structures. A class of topological phonons was recently found in two-dimensional structures similar to that of microtubules. The present work introduces another class of topological phonons, this time occurring in quasi-one-dimensional filamentary structures with inversion symmetry. The phenomenon is exemplified using a structure inspired from that of actin microfilaments, present in most live cells. The system discussed here is probably the simplest structure that supports topological phonon modes, a fact that allows detailed analysis in both time and frequency domains. We advance the hypothesis that the topological phonon modes are ubiquitous in the biological world and that living organisms make use of them during various processes.

Trends in Extreme Rainfall Frequency in the Contiguous United States: Attribution to Climate Change and Climate Variability Modes

NASA Astrophysics Data System (ADS)

Armal, S.; Devineni, N.; Khanbilvardi, R.

2017-12-01

This study presents a systematic analysis for identifying and attributing trends in the annual frequency of extreme rainfall events across the contiguous United States to climate change and climate variability modes. A Bayesian multilevel model is developed for 1,244 stations simultaneously to test the null hypothesis of no trend and verify two alternate hypotheses: Trend can be attributed to changes in global surface temperature anomalies, or to a combination of cyclical climate modes with varying quasi-periodicities and global surface temperature anomalies. The Bayesian multilevel model provides the opportunity to pool information across stations and reduce the parameter estimation uncertainty, hence identifying the trends better. The choice of the best alternate hypotheses is made based on Watanabe-Akaike Information Criterion, a Bayesian pointwise predictive accuracy measure. Statistically significant time trends are observed in 742 of the 1,244 stations. Trends in 409 of these stations can be attributed to changes in global surface temperature anomalies. These stations are predominantly found in the Southeast and Northeast climate regions. The trends in 274 of these stations can be attributed to the El Nino Southern Oscillations, North Atlantic Oscillation, Pacific Decadal Oscillation and Atlantic Multi-Decadal Oscillation along with changes in global surface temperature anomalies. These stations are mainly found in the Northwest, West and Southwest climate regions.

Using GPS, GIS, and Accelerometer Data to Predict Transportation Modes.

PubMed

Brondeel, Ruben; Pannier, Bruno; Chaix, Basile

2015-12-01

Active transportation is a substantial source of physical activity, which has a positive influence on many health outcomes. A survey of transportation modes for each trip is challenging, time-consuming, and requires substantial financial investments. This study proposes a passive collection method and the prediction of modes at the trip level using random forests. The RECORD GPS study collected real-life trip data from 236 participants over 7 d, including the transportation mode, global positioning system, geographical information systems, and accelerometer data. A prediction model of transportation modes was constructed using the random forests method. Finally, we investigated the performance of models on the basis of a limited number of participants/trips to predict transportation modes for a large number of trips. The full model had a correct prediction rate of 90%. A simpler model of global positioning system explanatory variables combined with geographical information systems variables performed nearly as well. Relatively good predictions could be made using a model based on the 991 trips of the first 30 participants. This study uses real-life data from a large sample set to test a method for predicting transportation modes at the trip level, thereby providing a useful complement to time unit-level prediction methods. By enabling predictions on the basis of a limited number of observations, this method may decrease the workload for participants/researchers and provide relevant trip-level data to investigate relations between transportation and health.

Transmission function properties for multi-layered structures: application to super-resolution.

PubMed

Mattiucci, N; D'Aguanno, G; Scalora, M; Bloemer, M J; Sibilia, C

2009-09-28

We discuss the properties of the transmission function in the k-space for a generic multi-layered structure. In particular we analytically demonstrate that a transmission greater than one in the evanescent spectrum (amplification of the evanescent modes) can be directly linked to the guided modes supported by the structure. Moreover we show that the slope of the phase of the transmission function in the propagating spectrum is inversely proportional to the ability of the structure to compensate the diffraction of the propagating modes. We apply these findings to discuss several examples where super-resolution is achieved thanks to the simultaneous availability of the amplification of the evanescent modes and the diffraction compensation of the propagating modes.

Propagating annular modes

NASA Astrophysics Data System (ADS)

Sheshadri, A.; Plumb, R. A.

2017-12-01

The leading "annular mode", defined as the dominant EOF of surface pressure or of zonal mean zonal wind variability, appears as a dipolar structure straddling the mean midlatitude jet and thus seems to describe north-south wobbling of the jet latitude. However, extratropical zonal wind anomalies frequently tend to migrate poleward. This behavior can be described by the first two EOFs, the first (AM1) being the dipolar structure, and the second (AM2) having a tripolar structure centered on the mean jet. Taken in isolation, AM1 thus describes a north-south wobbling of the jet position, while AM2 describes a strengthening and narrowing of the jet. However, despite the fact that they are spatially orthogonal, and their corresponding time series temporally orthogonal, AM1 and AM2 are not independent, but show significant lag-correlations which reveal the propagation. The EOFs are not modes of the underlying dynamical system governing the zonal flow evolution. The true modes can be estimated using principal oscillation pattern (POP) analysis. In the troposphere, the leading POPs manifest themselves as a pair of complex conjugate structures with conjugate eigenvalues thus, in reality, constituting a single, complex, mode that describes propagating anomalies. Even though the principal components associated with the two leading EOFs decay at different rates, each decays faster than the true mode. These facts have implications for eddy feedback and the susceptibility of the mode to external perturbations. If one interprets the annular modes as the modes of the system, then simple theory predicts that the response to steady forcing will usually be dominated by AM1 (with the longest time scale). However, such arguments should really be applied to the true modes. Experiments with a simplified GCM show that climate response to perturbations do not necessarily have AM1 structures. Implications of these results for stratosphere-troposphere interactions are explored. The POP structures are shown to be independent of any weighting (unlike the EOFs, the structures and time scales of which change substantially with pressure weighting), a fact that is particularly important for a deep system such as the troposphere and stratospere. The structure and time evolution of coupled modes of the troposphere-stratosphere system are studied.

A Mixed-Mode (I-II) Fracture Criterion for AS4/8552 Carbon/Epoxy Composite Laminate

NASA Astrophysics Data System (ADS)

Karnati, Sidharth Reddy

A majority of aerospace structures are subjected to bending and stretching loads that introduce peel and shear stresses between the plies of a composite laminate. These two stress components cause a combination of mode I and II fracture modes in the matrix layer of the composite laminate. The most common failure mode in laminated composites is delamination that affects the structural integrity of composite structures. Damage tolerant designs of structures require two types of materials data: mixed-mode (I-II) delamination fracture toughness that predicts failure and delamination growth rate that predicts the life of the structural component. This research focuses determining mixed-mode (I-II) fracture toughness under a combination of mode I and mode II stress states and then a fracture criterion for AS4/8552 composite laminate, which is widely used in general aviation. The AS4/8552 prepreg was supplied by Hexcel Corporation and autoclave fabricated into a 20-ply unidirectional laminate with an artificial delamination by a Fluorinated Ethylene Propylene (FEP) film at the mid-plane. Standard split beam specimens were prepared and tested in double cantilever beam (DCB) and end notched flexure modes to determine mode I (GIC) and II (GIIC) fracture toughnesses, respectively. The DCB specimens were also tested in a modified mixed-mode bending apparatus at GIIm /GT ratios of 0.18, 0.37, 0.57 and 0.78, where GT is total and GIIm is the mode II component of energy release rates. The measured fracture toughness, GC, was found to follow the locus a power law equation. The equation was validated for the present and literature experimental data.

A comparative modeling and molecular docking study on Mycobacterium tuberculosis targets involved in peptidoglycan biosynthesis.

PubMed

Fakhar, Zeynab; Naiker, Suhashni; Alves, Claudio N; Govender, Thavendran; Maguire, Glenn E M; Lameira, Jeronimo; Lamichhane, Gyanu; Kruger, Hendrik G; Honarparvar, Bahareh

2016-11-01

An alarming rise of multidrug-resistant Mycobacterium tuberculosis strains and the continuous high global morbidity of tuberculosis have reinvigorated the need to identify novel targets to combat the disease. The enzymes that catalyze the biosynthesis of peptidoglycan in M. tuberculosis are essential and noteworthy therapeutic targets. In this study, the biochemical function and homology modeling of MurI, MurG, MraY, DapE, DapA, Alr, and Ddl enzymes of the CDC1551 M. tuberculosis strain involved in the biosynthesis of peptidoglycan cell wall are reported. Generation of the 3D structures was achieved with Modeller 9.13. To assess the structural quality of the obtained homology modeled targets, the models were validated using PROCHECK, PDBsum, QMEAN, and ERRAT scores. Molecular dynamics simulations were performed to calculate root mean square deviation (RMSD) and radius of gyration (Rg) of MurI and MurG target proteins and their corresponding templates. For further model validation, RMSD and Rg for selected targets/templates were investigated to compare the close proximity of their dynamic behavior in terms of protein stability and average distances. To identify the potential binding mode required for molecular docking, binding site information of all modeled targets was obtained using two prediction algorithms. A docking study was performed for MurI to determine the potential mode of interaction between the inhibitor and the active site residues. This study presents the first accounts of the 3D structural information for the selected M. tuberculosis targets involved in peptidoglycan biosynthesis.

Effect of Gamma Ray Irradiation on Interlaminar Shear Strength of Glass Fiber Reinforced Plastics at 77 K

NASA Astrophysics Data System (ADS)

Nishimura, A.; Nishijima, S.; Izumi, Y.

2008-03-01

It is known that an organic material is damaged by gamma ray irradiation, and the strength after irradiation has dependence on the gamma ray dose. These issues are important not only to make global understanding of electric insulating performance of glass fiber reinforced plastics (GFRP) under irradiation condition but also to develop new insulation materials. This paper presents the dependence of fracture mode and interlaminar shear strength (ILSS) on the material and the gamma ray irradiation effect on the fracture mode and the ILSS. 6 mm radius loading nose and supports were used to prompt ILS fracture for a short beam test. A 2.5 mm thick small specimen machined out of a 13 mm thick G-10CR GFRP plate (sliced specimen) showed lower ILSS and translaminar shear (TLS) fracture, although the same size specimen prepared from a 2.5 mm G-10CR GFRP plate (non-sliced specimen) showed ILS fracture and the higher ILSS. Both type of specimens showed the degradation of ILSS after gamma ray irradiation. The fracture mode of the non-sliced specimen changed from ILS to TLS fracture and no bending fracture was observed. The resistance to shear deformation of glass cloth/epoxy laminate structure would be damaged by the irradiation.

Global motions exhibited by proteins in micro- to milliseconds simulations concur with anisotropic network model predictions

NASA Astrophysics Data System (ADS)

Gur, M.; Zomot, E.; Bahar, I.

2013-09-01

The Anton supercomputing technology recently developed for efficient molecular dynamics simulations permits us to examine micro- to milli-second events at full atomic resolution for proteins in explicit water and lipid bilayer. It also permits us to investigate to what extent the collective motions predicted by network models (that have found broad use in molecular biophysics) agree with those exhibited by full-atomic long simulations. The present study focuses on Anton trajectories generated for two systems: the bovine pancreatic trypsin inhibitor, and an archaeal aspartate transporter, GltPh. The former, a thoroughly studied system, helps benchmark the method of comparative analysis, and the latter provides new insights into the mechanism of function of glutamate transporters. The principal modes of motion derived from both simulations closely overlap with those predicted for each system by the anisotropic network model (ANM). Notably, the ANM modes define the collective mechanisms, or the pathways on conformational energy landscape, that underlie the passage between the crystal structure and substates visited in simulations. In particular, the lowest frequency ANM modes facilitate the conversion between the most probable substates, lending support to the view that easy access to functional substates is a robust determinant of evolutionarily selected native contact topology.

Gupta-Bleuler Quantization of the Maxwell Field in Globally Hyperbolic Space-Times

NASA Astrophysics Data System (ADS)

Finster, Felix; Strohmaier, Alexander

2015-08-01

We give a complete framework for the Gupta-Bleuler quantization of the free electromagnetic field on globally hyperbolic space-times. We describe one-particle structures that give rise to states satisfying the microlocal spectrum condition. The field algebras in the so-called Gupta-Bleuler representations satisfy the time-slice axiom, and the corresponding vacuum states satisfy the microlocal spectrum condition. We also give an explicit construction of ground states on ultrastatic space-times. Unlike previous constructions, our method does not require a spectral gap or the absence of zero modes. The only requirement, the absence of zero-resonance states, is shown to be stable under compact perturbations of topology and metric. Usual deformation arguments based on the time-slice axiom then lead to a construction of Gupta-Bleuler representations on a large class of globally hyperbolic space-times. As usual, the field algebra is represented on an indefinite inner product space, in which the physical states form a positive semi-definite subspace. Gauge transformations are incorporated in such a way that the field can be coupled perturbatively to a Dirac field. Our approach does not require any topological restrictions on the underlying space-time.

Tree cover in Central Africa: determinants and sensitivity under contrasted scenarios of global change.

PubMed

Aleman, Julie C; Blarquez, Olivier; Gourlet-Fleury, Sylvie; Bremond, Laurent; Favier, Charly

2017-01-30

Tree cover is a key variable for ecosystem functioning, and is widely used to study tropical ecosystems. But its determinants and their relative importance are still a matter of debate, especially because most regional and global analyses have not considered the influence of agricultural practices. More information is urgently needed regarding how human practices influence vegetation structure. Here we focused in Central Africa, a region still subjected to traditional agricultural practices with a clear vegetation gradient. Using remote sensing data and global databases, we calibrated a Random Forest model to correlatively link tree cover with climatic, edaphic, fire and agricultural practices data. We showed that annual rainfall and accumulated water deficit were the main drivers of the distribution of tree cover and vegetation classes (defined by the modes of tree cover density), but agricultural practices, especially pastoralism, were also important in determining tree cover. We simulated future tree cover with our model using different scenarios of climate and land-use (agriculture and population) changes. Our simulations suggest that tree cover may respond differently regarding the type of scenarios, but land-use change was an important driver of vegetation change even able to counterbalance the effect of climate change in Central Africa.

Tree cover in Central Africa: determinants and sensitivity under contrasted scenarios of global change

NASA Astrophysics Data System (ADS)

Aleman, Julie C.; Blarquez, Olivier; Gourlet-Fleury, Sylvie; Bremond, Laurent; Favier, Charly

2017-01-01

Tree cover is a key variable for ecosystem functioning, and is widely used to study tropical ecosystems. But its determinants and their relative importance are still a matter of debate, especially because most regional and global analyses have not considered the influence of agricultural practices. More information is urgently needed regarding how human practices influence vegetation structure. Here we focused in Central Africa, a region still subjected to traditional agricultural practices with a clear vegetation gradient. Using remote sensing data and global databases, we calibrated a Random Forest model to correlatively link tree cover with climatic, edaphic, fire and agricultural practices data. We showed that annual rainfall and accumulated water deficit were the main drivers of the distribution of tree cover and vegetation classes (defined by the modes of tree cover density), but agricultural practices, especially pastoralism, were also important in determining tree cover. We simulated future tree cover with our model using different scenarios of climate and land-use (agriculture and population) changes. Our simulations suggest that tree cover may respond differently regarding the type of scenarios, but land-use change was an important driver of vegetation change even able to counterbalance the effect of climate change in Central Africa.

2.4 GHz CMOS power amplifier with mode-locking structure to enhance gain.

PubMed

Lee, Changhyun; Park, Changkun

2014-01-01

We propose a mode-locking method optimized for the cascode structure of an RF CMOS power amplifier. To maximize the advantage of the typical mode-locking method in the cascode structure, the input of the cross-coupled transistor is modified from that of a typical mode-locking structure. To prove the feasibility of the proposed structure, we designed a 2.4 GHz CMOS power amplifier with a 0.18 μm RFCMOS process for polar transmitter applications. The measured power added efficiency is 34.9%, while the saturated output power is 23.32 dBm. The designed chip size is 1.4 × 0.6 mm(2).

2.4 GHz CMOS Power Amplifier with Mode-Locking Structure to Enhance Gain

PubMed Central

2014-01-01

We propose a mode-locking method optimized for the cascode structure of an RF CMOS power amplifier. To maximize the advantage of the typical mode-locking method in the cascode structure, the input of the cross-coupled transistor is modified from that of a typical mode-locking structure. To prove the feasibility of the proposed structure, we designed a 2.4 GHz CMOS power amplifier with a 0.18 μm RFCMOS process for polar transmitter applications. The measured power added efficiency is 34.9%, while the saturated output power is 23.32 dBm. The designed chip size is 1.4 × 0.6 mm2. PMID:25045755

Mode Transitions in Magnetically Shielded Hall Effect Thrusters

NASA Technical Reports Server (NTRS)

Sekerak, Michael J.; Longmier, Benjamin W.; Gallimore, Alec D.; Huang, Wensheng; Kamhawi, Hani; Hofer, Richard R.; Jorns, Benjamin A.; Polk, James E.

2014-01-01

A mode transition study is conducted in magnetically shielded thrusters where the magnetic field magnitude is varied to induce mode transitions. Three different oscillatory modes are identified with the 20-kW NASA-300MS-2 and the 6-kW H6MS: Mode 1) global mode similar to unshielded thrusters at low magnetic fields, Mode 2) cathode oscillations at nominal magnetic fields, and Mode 3) combined spoke, cathode and breathing mode oscillations at high magnetic fields. Mode 1 exhibits large amplitude, low frequency (1-10 kHz), breathing mode type oscillations where discharge current mean value and oscillation amplitude peak. The mean discharge current is minimized while thrust-to-power and anode efficiency are maximized in Mode 2, where higher frequency (50-90 kHz), low amplitude, cathode oscillations dominate. Thrust is maximized in Mode 3 and decreases by 5-6% with decreasing magnetic field strength. The presence or absence of spokes and strong cathode oscillations do not affect each other or discharge current. Similar to unshielded thrusters, mode transitions and plasma oscillations affect magnetically shielded thruster performance and should be characterized during system development.

ICT as an Effective Tool for Internationalization of Higher Education

ERIC Educational Resources Information Center

Magzan, Masha; Aleksic-Maslac, Karmela

2009-01-01

Globalization and new technologies have opened up a global market for education pressuring many institutions to be internationalized. Within mainly descriptive mode of analysis, this study investigates how internationalization of higher education can be facilitated by the effective use of information and communication technologies. Reporting…

Alcohol sensor based on single-mode-multimode-single-mode fiber structure

NASA Astrophysics Data System (ADS)

Mefina Yulias, R.; Hatta, A. M.; Sekartedjo, Sekartedjo

2016-11-01

Alcohol sensor based on Single-mode -Multimode-Single-mode (SMS) fiber structure is being proposed to sense alcohol concentration in alcohol-water mixtures. This proposed sensor uses refractive index sensing as its sensing principle. Fabricated SMS fiber structure had 40 m of multimode length. With power input -6 dBm and wavelength 1550 nm, the proposed sensor showed good response with sensitivity 1,983 dB per % v/v with measurement range 05 % v/v and measurement span 0,5% v/v.

Hybrid epidemics--a case study on computer worm conficker.

PubMed

Zhang, Changwang; Zhou, Shi; Chain, Benjamin M

2015-01-01

Conficker is a computer worm that erupted on the Internet in 2008. It is unique in combining three different spreading strategies: local probing, neighbourhood probing, and global probing. We propose a mathematical model that combines three modes of spreading: local, neighbourhood, and global, to capture the worm's spreading behaviour. The parameters of the model are inferred directly from network data obtained during the first day of the Conficker epidemic. The model is then used to explore the tradeoff between spreading modes in determining the worm's effectiveness. Our results show that the Conficker epidemic is an example of a critically hybrid epidemic, in which the different modes of spreading in isolation do not lead to successful epidemics. Such hybrid spreading strategies may be used beneficially to provide the most effective strategies for promulgating information across a large population. When used maliciously, however, they can present a dangerous challenge to current internet security protocols.

Local practice and global data: loyalty cards, social practices, and consumer surveillance.

PubMed

Zurawski, Nils

2011-01-01

Monitoring of consumers has become the most widespread mode of surveillance today. Being a multi-billion dollar business, the collected data are traded globally without much concern by the consumers themselves. Loyalty cards are an element with which such data are collected. Analyzing the role of loyalty cards in everyday practices such as shopping, I discuss how new modes of surveillance evolve and work and why they eventually make communication about data protection a difficult matter. Further, I will propose an alternative approach to the study of surveillance. This approach is concerned with local practices, focusing on subjective narratives in order to view surveillance as an integral part of culturally or socially manifested contexts and actions and not to view surveillance as something alien to society and human interaction. This will open up other possibilities to study modes of subjectivity or how individuals situate themselves within society.

Hybrid Epidemics—A Case Study on Computer Worm Conficker

PubMed Central

Zhang, Changwang; Zhou, Shi; Chain, Benjamin M.

2015-01-01

Conficker is a computer worm that erupted on the Internet in 2008. It is unique in combining three different spreading strategies: local probing, neighbourhood probing, and global probing. We propose a mathematical model that combines three modes of spreading: local, neighbourhood, and global, to capture the worm’s spreading behaviour. The parameters of the model are inferred directly from network data obtained during the first day of the Conficker epidemic. The model is then used to explore the tradeoff between spreading modes in determining the worm’s effectiveness. Our results show that the Conficker epidemic is an example of a critically hybrid epidemic, in which the different modes of spreading in isolation do not lead to successful epidemics. Such hybrid spreading strategies may be used beneficially to provide the most effective strategies for promulgating information across a large population. When used maliciously, however, they can present a dangerous challenge to current internet security protocols. PMID:25978309

Self-Organisation and Intermittent Coherent Oscillations in the EXTRAP T2 Reversed Field Pinch

NASA Astrophysics Data System (ADS)

Cecconello, M.; Malmberg, J.-A.; Sallander, E.; Drake, J. R.

Many reversed-field pinch (RFP) experiments exhibit a coherent oscillatory behaviour that is characteristic of discrete dynamo events and is associated with intermittent current profile self-organisation phenomena. However, in the vast majority of the discharges in the resistive shell RFP experiment EXTRAP T2, the dynamo activity does not show global, coherent oscillatory behaviour. The internally resonant tearing modes are phase-aligned and wall-locked resulting in a large localised magnetic perturbation. Equilibrium and plasma parameters have a level of high frequency fluctuations but the average values are quasi-steady. For some discharges, however, the equilibrium parameters exhibit the oscillatory behaviour characteristic of the discrete dynamo events. For these discharges, the trend observed in the tearing mode spectra, associated with the onset of the discrete relaxation event behaviour, is a relative higher amplitude of m = 0 mode activity and relative lower amplitude of the m = 1 mode activity compared with their average values. Global plasma parameters and model profile calculations for sample discharges representing the two types of relaxation dynamics are presented.

Dynamic testing of a two-dimensional box truss beam

NASA Technical Reports Server (NTRS)

White, Charles W.

1987-01-01

Testing to determine the effects of joint freeplay and pretensioning of diagonal members on the dynamic characteristics of a two-dimensional box truss beam was conducted. The test article was ten bays of planar truss suspended by long wires at each joint. Each bay measured 2 meters per side. Pins of varying size were used to simulate various joint freeplay conditions. Single-point random excitation was the primary method of test. The rational fraction polynomial method was used to extract modal characteristics from test data. A finite element model of the test article was generated from which modal characteristics were predicted. These were compared with those obtained from tests. With the exception of the fundamental mode, correlation of theoretical and experimental results was poor, caused by the resonant coupling of local truss member bending modes with global truss beam modes. This coupling introduced many modes in the frequency range of interest whose frequencies were sensitive to joint boundary conditions. It was concluded that local/global coupling must be avoided in the frequency range where accurate modal characteristics are required.

Variability common to global sea surface temperatures and runoff in the conterminous United States

USGS Publications Warehouse

McCabe, Gregory J.; Wolock, David M.

2014-01-01

Singular value decomposition (SVD) is used to identify the variability common to global sea surface temperatures (SSTs) and water-balance-modeled water-year (WY) runoff in the conterminous United States (CONUS) for the 1900–2012 period. Two modes were identified from the SVD analysis; the two modes explain 25% of the variability in WY runoff and 33% of the variability in WY SSTs. The first SVD mode reflects the variability of the El Niño–Southern Oscillation (ENSO) in the SST data and the hydroclimatic effects of ENSO on WY runoff in the CONUS. The second SVD mode is related to variability of the Atlantic multidecadal oscillation (AMO). An interesting aspect of these results is that both ENSO and AMO appear to have nearly equivalent effects on runoff variability in the CONUS. However, the relatively small amount of variance explained by the SVD analysis indicates that there is little covariation between runoff and SSTs, suggesting that SSTs may not be a viable predictor of runoff variability for most of the conterminous United States.

Future hotspots of increasing temperature variability in tropical countries

NASA Astrophysics Data System (ADS)

Bathiany, S.; Dakos, V.; Scheffer, M.; Lenton, T. M.

2017-12-01

Resolving how climate variability will change in future is crucial to determining how challenging it will be for societies and ecosystems to adapt to climate change. We show that the largest increases in temperature variability - that are robust between state-of-the art climate models - are concentrated in tropical countries. On average, temperature variability increases by 15% per degree of global warming in Amazonia and Southern Africa during austral summer, and by up to 10% °C-1 in the Sahel, India and South East Asia. Southern hemisphere changes can be explained by drying soils, whereas shifts in atmospheric structure play a more important role in the Northern hemisphere. These robust regional changes in variability are associated with monthly timescale events, whereas uncertain changes in inter-annual modes of variability make the response of global temperature variability uncertain. Our results suggest that regional changes in temperature variability will create new inequalities in climate change impacts between rich and poor nations.

VELOCITY FIELD OF COMPRESSIBLE MAGNETOHYDRODYNAMIC TURBULENCE: WAVELET DECOMPOSITION AND MODE SCALINGS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kowal, Grzegorz; Lazarian, A., E-mail: kowal@astro.wisc.ed, E-mail: lazarian@astro.wisc.ed

We study compressible magnetohydrodynamic turbulence, which holds the key to many astrophysical processes, including star formation and cosmic-ray propagation. To account for the variations of the magnetic field in the strongly turbulent fluid, we use wavelet decomposition of the turbulent velocity field into Alfven, slow, and fast modes, which presents an extension of the Cho and Lazarian decomposition approach based on Fourier transforms. The wavelets allow us to follow the variations of the local direction of the magnetic field and therefore improve the quality of the decomposition compared to the Fourier transforms, which are done in the mean field referencemore » frame. For each resulting component, we calculate the spectra and two-point statistics such as longitudinal and transverse structure functions as well as higher order intermittency statistics. In addition, we perform a Helmholtz- Hodge decomposition of the velocity field into incompressible and compressible parts and analyze these components. We find that the turbulence intermittency is different for different components, and we show that the intermittency statistics depend on whether the phenomenon was studied in the global reference frame related to the mean magnetic field or in the frame defined by the local magnetic field. The dependencies of the measures we obtained are different for different components of the velocity; for instance, we show that while the Alfven mode intermittency changes marginally with the Mach number, the intermittency of the fast mode is substantially affected by the change.« less

Solar wind: A possible factor driving the interannual sea surface temperature tripolar mode over North Atlantic

NASA Astrophysics Data System (ADS)

Xiao, Ziniu; Li, Delin

2016-06-01

The effect of solar wind (SW) on the North Atlantic sea surface temperature (SST) in boreal winter is examined through an analysis of observational data during 1964-2013. The North Atlantic SSTs show a pronounced meridional tripolar pattern in response to solar wind speed (SWS) variations. This pattern is broadly similar to the leading empirical orthogonal function (EOF) mode of interannual variations in the wintertime SSTs over North Atlantic. The time series of this leading EOF mode of SST shows a significant interannual period, which is the same as that of wintertime SWS. This response also appears as a compact north-south seesaw of sea level pressure and a vertical tripolar structure of zonal wind, which simultaneously resembles the North Atlantic Oscillation (NAO) in the overlying atmosphere. As compared with the typical low SWS winters, during the typical high SWS winters, the stratospheric polar night jet (PNJ) is evidently enhanced and extends from the stratosphere to the troposphere, even down to the North Atlantic Ocean surface. Notably, the North Atlantic Ocean is an exclusive region in which the SW signal spreads downward from the stratosphere to the troposphere. Thus, it seems that the SW is a possible factor for this North Atlantic SST tripolar mode. The dynamical process of stratosphere-troposphere coupling, together with the global atmospheric electric circuit-cloud microphysical process, probably accounts for the particular downward propagation of the SW signal.

Sensing site-specific structural characteristics and chirality using vibrational circular dichroism of isotope labeled peptides.

PubMed

Keiderling, Timothy A

2017-12-01

Isotope labeling has a long history in chemistry as a tool for probing structure, offering enhanced sensitivity, or enabling site selection with a wide range of spectroscopic tools. Chirality sensitive methods such as electronic circular dichroism are global structural tools and have intrinsically low resolution. Consequently, they are generally insensitive to modifications to enhance site selectivity. The use of isotope labeling to modify vibrational spectra with unique resolvable frequency shifts can provide useful site-specific sensitivity, and these methods have been recently more widely expanded in biopolymer studies. While the spectral shifts resulting from changes in isotopic mass can provide resolution of modes from specific parts of the molecule and can allow detection of local change in structure with perturbation, these shifts alone do not directly indicate structure or chirality. With vibrational circular dichroism (VCD), the shifted bands and their resultant sign patterns can be used to indicate local conformations in labeled biopolymers, particularly if multiple labels are used and if their coupling is theoretically modeled. This mini-review discusses selected examples of the use of labeling specific amides in peptides to develop local structural insight with VCD spectra. © 2017 Wiley Periodicals, Inc.

EH 11n modes E type in the disk and washer accelerating structure

NASA Astrophysics Data System (ADS)

Andreev, V. G.; Belugin, V. M.; Daikovsky, A. G.; Esin, S. K.; Kravchuk, L. V.; Paramonov, V. V.; Ryabov, A. D.

1983-01-01

The disk and washer accelerating structure has a great deal to do with high-beta structures progress. The frequencies and electromagnetic fields for modes, which have a different number of azimuthal variations, are calculated to determined the dispersion properties and other characteristics of parasitic modes in a disc and washer accelerating structure. The main attention was given to the accelerating structure of the linear accelerator of the Institute for Nuclear Research (INR) of the USSR Academy of Sciences. Modification of a structure for PIGMI accelerator (LANL, USA) is considered briefly.

Nonlinear Evolution of Counter-Propagating Whistler Mode Waves Excited by Anisotropic Electrons Within the Equatorial Source Region: 1-D PIC Simulations

NASA Astrophysics Data System (ADS)

Chen, Huayue; Gao, Xinliang; Lu, Quanming; Sun, Jicheng; Wang, Shui

2018-02-01

Nonlinear physical processes related to whistler mode waves are attracting more and more attention for their significant role in reshaping whistler mode spectra in the Earth's magnetosphere. Using a 1-D particle-in-cell simulation model, we have investigated the nonlinear evolution of parallel counter-propagating whistler mode waves excited by anisotropic electrons within the equatorial source region. In our simulations, after the linear phase of whistler mode instability, the strong electrostatic standing structures along the background magnetic field will be formed, resulting from the coupling between excited counter-propagating whistler mode waves. The wave numbers of electrostatic standing structures are about twice those of whistler mode waves generated by anisotropic hot electrons. Moreover, these electrostatic standing structures can further be coupled with either parallel or antiparallel propagating whistler mode waves to excite high-k modes in this plasma system. Compared with excited whistler mode waves, these high-k modes typically have 3 times wave number, same frequency, and about 2 orders of magnitude smaller amplitude. Our study may provide a fresh view on the evolution of whistler mode waves within their equatorial source regions in the Earth's magnetosphere.

One-way mode transmission in one-dimensional phononic crystal plates

NASA Astrophysics Data System (ADS)

Zhu, Xuefeng; Zou, Xinye; Liang, Bin; Cheng, Jianchun

2010-12-01

We investigate theoretically the band structures of one-dimensional phononic crystal (PC) plates with both antisymmetric and symmetric structures, and show how unidirectional transmission behavior can be obtained for either antisymmetric waves (A modes) or symmetric waves (S modes) by exploiting mode conversion and selection in the linear plate systems. The theoretical approach is illustrated for one PC plate example where unidirectional transmission behavior is obtained in certain frequency bands. Employing harmonic frequency analysis, we numerically demonstrate the one-way mode transmission for the PC plate with finite superlattice by calculating the steady-state displacement fields under A modes source (or S modes source) in forward and backward direction, respectively. The results show that the incident waves from A modes source (or S modes source) are transformed into S modes waves (or A modes waves) after passing through the superlattice in the forward direction and the Lamb wave rejections in the backward direction are striking with a power extinction ratio of more than 1000. The present structure can be easily extended to two-dimensional PC plate and efficiently encourage practical studies of experimental realization which is believed to have much significance for one-way Lamb wave mode transmission.

ITER L-mode confinement database

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kaye, S.M.

This paper describes the content of an L-mode database that has been compiled with data from Alcator C-Mod, ASDEX, DIII, DIII-D, FTU, JET, JFT-2M, JT-60, PBX-M, PDX, T-10, TEXTOR, TFTR, and Tore-Supra. The database consists of a total of 2938 entries, 1881 of which are in the L-phase while 922 are ohmically heated only (OH). Each entry contains up to 95 descriptive parameters, including global and kinetic information, machine conditioning, and configuration. The paper presents a description of the database and the variables contained therein, and it also presents global and thermal scalings along with predictions for ITER.

Towards an Understanding of Atmospheric Balance

NASA Technical Reports Server (NTRS)

Errico, Ronald M.

2015-01-01

During a 35 year period I published 30+ pear-reviewed papers and technical reports concerning, in part or whole, the topic of atmospheric balance. Most used normal modes, either implicitly or explicitly, as the appropriate diagnostic tool. This included examination of nonlinear balance in several different global and regional models using a variety of novel metrics as well as development of nonlinear normal mode initialization schemes for particular global and regional models. Recent studies also included the use of adjoint models and OSSEs to answer some questions regarding balance. lwill summarize what I learned through those many works, but also present what l see as remaining issues to be considered or investigated.

Equilibrium drives of the low and high field side n = 2 plasma response and impact on global confinement

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paz-Soldan, C.; Logan, N. C.; Haskey, S. R.

The nature of the multi-modal n=2 plasma response and its impact on global confinement is studied as a function of the axisymmetric equilibrium pressure, edge safety factor, collisionality, and L-versus H-mode conditions. Varying the relative phase (ΔΦ UL) between upper and lower in-vessel coils demonstrates that different n=2 poloidal spectra preferentially excite different plasma responses. These different plasma response modes are preferentially detected on the tokamak high-field side (HFS) or low-field side (LFS) midplanes, have different radial extents, couple differently to the resonant surfaces, and have variable impacts on edge stability and global confinement. In all equilibrium conditions studied, themore » observed confinement degradation shares the same ΔΦ UL dependence as the coupling to the resonant surfaces given by both ideal (IPEC) and resistive (MARS-F) MHD computation. Varying the edge safety factor shifts the equilibrium field-line pitch and thus the ΔΦ UL dependence of both the global confinement and the n=2 magnetic response. As edge safety factor is varied, modeling finds that the HFS response (but not the LFS response), the resonant surface coupling, and the edge displacements near the X-point all share the same ΔΦ UL dependence. The LFS response magnitude is strongly sensitive to the core pressure and is insensitive to the collisionality and edge safety factor. This indicates that the LFS measurements are primarily sensitive to a pressure-driven kink-ballooning mode that couples to the core plasma. MHD modeling accurately reproduces these (and indeed all) LFS experimental trends and supports this interpretation. In contrast to the LFS, the HFS magnetic response and correlated global confinement impact is unchanged with plasma pressure, but is strongly reduced in high collisionality conditions in both H- and L-mode. This experimentally suggests the bootstrap current drives the HFS response through the kink-peeling mode drive, though surprisingly weak or no dependence on the bootstrap current is seen in modeling. Instead, modeling is revealed to be very sensitive to the details of the edge current profile and equilibrium truncation. Furthermore, holding truncation fixed, most HFS experimental trends are not captured, thus demonstrating a stark contrast between the robustness of the HFS experimental results and the sensitivity of its computation.« less

Equilibrium drives of the low and high field side n  =  2 plasma response and impact on global confinement

NASA Astrophysics Data System (ADS)

Paz-Soldan, C.; Logan, N. C.; Haskey, S. R.; Nazikian, R.; Strait, E. J.; Chen, X.; Ferraro, N. M.; King, J. D.; Lyons, B. C.; Park, J.-K.

2016-05-01

The nature of the multi-modal n  =  2 plasma response and its impact on global confinement is studied as a function of the axisymmetric equilibrium pressure, edge safety factor, collisionality, and L-versus H-mode conditions. Varying the relative phase (Δ {φ\\text{UL}} ) between upper and lower in-vessel coils demonstrates that different n  =  2 poloidal spectra preferentially excite different plasma responses. These different plasma response modes are preferentially detected on the tokamak high-field side (HFS) or low-field side (LFS) midplanes, have different radial extents, couple differently to the resonant surfaces, and have variable impacts on edge stability and global confinement. In all equilibrium conditions studied, the observed confinement degradation shares the same Δ {φ\\text{UL}} dependence as the coupling to the resonant surfaces given by both ideal (IPEC) and resistive (MARS-F) MHD computation. Varying the edge safety factor shifts the equilibrium field-line pitch and thus the Δ {φ\\text{UL}} dependence of both the global confinement and the n  =  2 magnetic response. As edge safety factor is varied, modeling finds that the HFS response (but not the LFS response), the resonant surface coupling, and the edge displacements near the X-point all share the same Δ {φ\\text{UL}} dependence. The LFS response magnitude is strongly sensitive to the core pressure and is insensitive to the collisionality and edge safety factor. This indicates that the LFS measurements are primarily sensitive to a pressure-driven kink-ballooning mode that couples to the core plasma. MHD modeling accurately reproduces these (and indeed all) LFS experimental trends and supports this interpretation. In contrast to the LFS, the HFS magnetic response and correlated global confinement impact is unchanged with plasma pressure, but is strongly reduced in high collisionality conditions in both H- and L-mode. This experimentally suggests the bootstrap current drives the HFS response through the kink-peeling mode drive, though surprisingly weak or no dependence on the bootstrap current is seen in modeling. Instead, modeling is revealed to be very sensitive to the details of the edge current profile and equilibrium truncation. Holding truncation fixed, most HFS experimental trends are not captured, thus demonstrating a stark contrast between the robustness of the HFS experimental results and the sensitivity of its computation.

Equilibrium drives of the low and high field side n = 2 plasma response and impact on global confinement

DOE PAGES

Paz-Soldan, C.; Logan, N. C.; Haskey, S. R.; ...

2016-03-31

The nature of the multi-modal n=2 plasma response and its impact on global confinement is studied as a function of the axisymmetric equilibrium pressure, edge safety factor, collisionality, and L-versus H-mode conditions. Varying the relative phase (ΔΦ UL) between upper and lower in-vessel coils demonstrates that different n=2 poloidal spectra preferentially excite different plasma responses. These different plasma response modes are preferentially detected on the tokamak high-field side (HFS) or low-field side (LFS) midplanes, have different radial extents, couple differently to the resonant surfaces, and have variable impacts on edge stability and global confinement. In all equilibrium conditions studied, themore » observed confinement degradation shares the same ΔΦ UL dependence as the coupling to the resonant surfaces given by both ideal (IPEC) and resistive (MARS-F) MHD computation. Varying the edge safety factor shifts the equilibrium field-line pitch and thus the ΔΦ UL dependence of both the global confinement and the n=2 magnetic response. As edge safety factor is varied, modeling finds that the HFS response (but not the LFS response), the resonant surface coupling, and the edge displacements near the X-point all share the same ΔΦ UL dependence. The LFS response magnitude is strongly sensitive to the core pressure and is insensitive to the collisionality and edge safety factor. This indicates that the LFS measurements are primarily sensitive to a pressure-driven kink-ballooning mode that couples to the core plasma. MHD modeling accurately reproduces these (and indeed all) LFS experimental trends and supports this interpretation. In contrast to the LFS, the HFS magnetic response and correlated global confinement impact is unchanged with plasma pressure, but is strongly reduced in high collisionality conditions in both H- and L-mode. This experimentally suggests the bootstrap current drives the HFS response through the kink-peeling mode drive, though surprisingly weak or no dependence on the bootstrap current is seen in modeling. Instead, modeling is revealed to be very sensitive to the details of the edge current profile and equilibrium truncation. Furthermore, holding truncation fixed, most HFS experimental trends are not captured, thus demonstrating a stark contrast between the robustness of the HFS experimental results and the sensitivity of its computation.« less

NASA Structural Analysis Report on the American Airlines Flight 587 Accident - Local Analysis of the Right Rear Lug

NASA Technical Reports Server (NTRS)

Raju, Ivatury S; Glaessgen, Edward H.; Mason, Brian H; Krishnamurthy, Thiagarajan; Davila, Carlos G

2005-01-01

A detailed finite element analysis of the right rear lug of the American Airlines Flight 587 - Airbus A300-600R was performed as part of the National Transportation Safety Board s failure investigation of the accident that occurred on November 12, 2001. The loads experienced by the right rear lug are evaluated using global models of the vertical tail, local models near the right rear lug, and a global-local analysis procedure. The right rear lug was analyzed using two modeling approaches. In the first approach, solid-shell type modeling is used, and in the second approach, layered-shell type modeling is used. The solid-shell and the layered-shell modeling approaches were used in progressive failure analyses (PFA) to determine the load, mode, and location of failure in the right rear lug under loading representative of an Airbus certification test conducted in 1985 (the 1985-certification test). Both analyses were in excellent agreement with each other on the predicted failure loads, failure mode, and location of failure. The solid-shell type modeling was then used to analyze both a subcomponent test conducted by Airbus in 2003 (the 2003-subcomponent test) and the accident condition. Excellent agreement was observed between the analyses and the observed failures in both cases. From the analyses conducted and presented in this paper, the following conclusions were drawn. The moment, Mx (moment about the fuselage longitudinal axis), has significant effect on the failure load of the lugs. Higher absolute values of Mx give lower failure loads. The predicted load, mode, and location of the failure of the 1985-certification test, 2003-subcomponent test, and the accident condition are in very good agreement. This agreement suggests that the 1985-certification and 2003- subcomponent tests represent the accident condition accurately. The failure mode of the right rear lug for the 1985-certification test, 2003-subcomponent test, and the accident load case is identified as a cleavage-type failure. For the accident case, the predicted failure load for the right rear lug from the PFA is greater than 1.98 times the limit load of the lugs. I.

Structural Analysis of the Right Rear Lug of American Airlines Flight 587

NASA Technical Reports Server (NTRS)

Raju, Ivatury S.; Glaessgen, Edward H.; Mason, Brian H.; Krishnamurthy, Thiagarajan; Davila, Carlos G.

2006-01-01

A detailed finite element analysis of the right rear lug of the American Airlines Flight 587 - Airbus A300-600R was performed as part of the National Transportation Safety Board s failure investigation of the accident that occurred on November 12, 2001. The loads experienced by the right rear lug are evaluated using global models of the vertical tail, local models near the right rear lug, and a global-local analysis procedure. The right rear lug was analyzed using two modeling approaches. In the first approach, solid-shell type modeling is used, and in the second approach, layered-shell type modeling is used. The solid-shell and the layered-shell modeling approaches were used in progressive failure analyses (PFA) to determine the load, mode, and location of failure in the right rear lug under loading representative of an Airbus certification test conducted in 1985 (the 1985-certification test). Both analyses were in excellent agreement with each other on the predicted failure loads, failure mode, and location of failure. The solid-shell type modeling was then used to analyze both a subcomponent test conducted by Airbus in 2003 (the 2003-subcomponent test) and the accident condition. Excellent agreement was observed between the analyses and the observed failures in both cases. The moment, Mx (moment about the fuselage longitudinal axis), has significant effect on the failure load of the lugs. Higher absolute values of Mx give lower failure loads. The predicted load, mode, and location of the failure of the 1985- certification test, 2003-subcomponent test, and the accident condition are in very good agreement. This agreement suggests that the 1985-certification and 2003-subcomponent tests represent the accident condition accurately. The failure mode of the right rear lug for the 1985-certification test, 2003-subcomponent test, and the accident load case is identified as a cleavage-type failure. For the accident case, the predicted failure load for the right rear lug from the PFA is greater than 1.98 times the limit load of the lugs.

Self-Similarity of Plasmon Edge Modes on Koch Fractal Antennas.

PubMed

Bellido, Edson P; Bernasconi, Gabriel D; Rossouw, David; Butet, Jérémy; Martin, Olivier J F; Botton, Gianluigi A

2017-11-28

We investigate the plasmonic behavior of Koch snowflake fractal geometries and their possible application as broadband optical antennas. Lithographically defined planar silver Koch fractal antennas were fabricated and characterized with high spatial and spectral resolution using electron energy loss spectroscopy. The experimental data are supported by numerical calculations carried out with a surface integral equation method. Multiple surface plasmon edge modes supported by the fractal structures have been imaged and analyzed. Furthermore, by isolating and reproducing self-similar features in long silver strip antennas, the edge modes present in the Koch snowflake fractals are identified. We demonstrate that the fractal response can be obtained by the sum of basic self-similar segments called characteristic edge units. Interestingly, the plasmon edge modes follow a fractal-scaling rule that depends on these self-similar segments formed in the structure after a fractal iteration. As the size of a fractal structure is reduced, coupling of the modes in the characteristic edge units becomes relevant, and the symmetry of the fractal affects the formation of hybrid modes. This analysis can be utilized not only to understand the edge modes in other planar structures but also in the design and fabrication of fractal structures for nanophotonic applications.

Mode cross coupling observations with a rotation sensor.

NASA Astrophysics Data System (ADS)

Nader, Maria-Fernanda; Igel, Heiner; Ferreira, Ana M. G.; Al-Attar, David

2013-04-01

The Earth's free oscillations induced by large earthquakes have been one of the most important ways to measure the Earth's internal structure and processes. They provide important large scale constraints on a variety of elastic parameters, attenuation and density of the Earth's deep interior. The potential of rotational seismic records for long period seismology was proven useful as a complement to traditional measurements in the study of the Earth's free oscillations (Igel et al. 2011). Thanks to the high resolution of the G-ring laser located at Geodetic Observatory Wettzell, Germany, we are now able to study the spectral energy generated by rotations in the low frequency range. On a SNREI Earth, a vertical component rotational sensor is primarily excited by horizontally polarised shear motions (SH waves, Love waves) with theoretically no sensitivity to compressional waves and conversions (P-SV) and Rayleigh waves. Consequently, in the context of the Earth's normal modes, this instrument detects mostly toroidal modes. Here, we present observations of spectral energy of both toroidal and spheroidal normal modes in the G-ring Laser records of two of the largest magnitude events recently recorded: Tohoku-Oki, Japan, 2011 and Maule, Chile, 2010. In an attempt to determine the mechanisms responsible for spheroidal energy in the vertical axes rotational spectra, we first rule out instrumental effects as well as the effect of local heterogeneity. Second, we carry out a simulation of an ideal rotational sensor taking into account the effects of the Earth's daily rotation, its hydrostatic ellipticity and structural heterogeneity, finding a good fit to the data. Simulations considering each effect separately are performed in order to evaluate the sensitivity of rotational motions to global effects with respect to traditional translation measurements. Igel H, Nader MF, Kurrle D, Ferreira AM,Wassermann J, Schreiber KU (2011) ''Observations of Earth's toroidal free oscillations with a rotation sensor: the 2011 magnitude 9.0 Tohoku-Oki earthquake.'' Geophys Res Lett. doi:10.1029/2011GL049045

Giant amplification in degenerate band edge slow-wave structures interacting with an electron beam

DOE Office of Scientific and Technical Information (OSTI.GOV)

Othman, Mohamed A. K.; Veysi, Mehdi; Capolino, Filippo

2016-03-15

We propose a new amplification regime based on a synchronous operation of four degenerate electromagnetic (EM) modes in a slow-wave structure and the electron beam, referred to as super synchronization. These four EM modes arise in a Fabry-Pérot cavity when degenerate band edge (DBE) condition is satisfied. The modes interact constructively with the electron beam resulting in superior amplification. In particular, much larger gains are achieved for smaller beam currents compared to conventional structures based on synchronization with only a single EM mode. We demonstrate giant gain scaling with respect to the length of the slow-wave structure compared to conventionalmore » Pierce type single mode traveling wave tube amplifiers. We construct a coupled transmission line model for a loaded waveguide slow-wave structure exhibiting a DBE, and investigate the phenomenon of giant gain via super synchronization using the Pierce model generalized to multimode interaction.« less

A novel optical waveguide LP01/LP02 mode converter

NASA Astrophysics Data System (ADS)

Shen, Dongya; Wang, Changhui; Ma, Chuan; Mellah, Hakim; Zhang, Xiupu; Yuan, Hong; Ren, Wenping

2018-07-01

A novel optical waveguide LP01 /LP02 mode converter is proposed using combination of bicone structure based on the coupled-mode theory. It is composed of a cladding, a tapered core and combined bicone structure. It is found that this mode converter can have operating bandwidth of 1350-1700 nm, i.e. 350 nm, with a conversion efficiency of ∼90% (∼0.5 dB) and low crosstalk from other modes

Bimodal pair f-KdV dynamics in star-forming clouds

NASA Astrophysics Data System (ADS)

Karmakar, Pralay Kumar; Haloi, Archana; Roy, Supriya

2018-04-01

A theoretical formalism for investigating the bimodal conjugational mode dynamics of hybrid source, dictated by a unique pair of forced Korteweg-de Vries (f-KdV) equations in a complex turbo-magnetized star-forming cloud, is reported. It uses a standard multi-scale analysis executed over the cloud-governing equations in a closure form to derive the conjugated pair f-KdV system. We numerically see the structural features of two distinctive classes of eigenmode patterns stemming from the conjoint gravito-electrostatic interplay. The electrostatic compressive monotonic aperiodic shock-like patterns and gravitational compressive non-monotonic oscillatory shock-like structures are excitable. It is specifically revealed that the constitutive grain-charge (grain-mass) acts as electrostatic stabilizer (gravitational destabilizer) against the global cloud collapse dynamics. The basic features of the nonlinear coherent structures are confirmed in systematic phase-plane landscapes, indicating electrostatic irregular non-homoclinic open trajectories and gravitational atypical non-chaotic homoclinic fixed-point attractors. The relevance in the real astro-cosmic scenarios of the early phases of structure formation via wave-driven fluid-accretive transport processes is summarily emphasized.

Analyses and tests of the B-1 aircraft structural mode control system

NASA Technical Reports Server (NTRS)

Wykes, J. H.; Byar, T. R.; Macmiller, C. J.; Greek, D. C.

1980-01-01

Analyses and flight tests of the B-1 structural mode control system (SMCS) are presented. Improvements in the total dynamic response of a flexible aircraft and the benefits to ride qualities, handling qualities, crew efficiency, and reduced dynamic loads on the primary structures, were investigated. The effectiveness and the performance of the SMCS, which uses small aerodynamic surfaces at the vehicle nose to provide damping to the structural modes, were evaluated.

Spillover stabilization and decentralized modal control of large space structures

NASA Technical Reports Server (NTRS)

Czajkowski, Eva A.; Preumont, Andre

1987-01-01

The stabilization of the neglected dynamics of the higher modes of vibration in large space structures is studied, and the influence of the structure of the plant noise intensity matrix of the Kalman-Bucy filter on the stability margin of the residual modes is shown. An optimization procedure uses information on the residual modes to minimize spillover of known residual modes while preserving robustness with respect to the unknown dynamics, and the optimum plant noise intensity matrix is selected to maximize the stability margins of the residual modes and to properly place the observer poles. Examples for both centralized and decentralized control are considered.

Renormalization of Collective Modes in Large-Scale Neural Dynamics

NASA Astrophysics Data System (ADS)

Moirogiannis, Dimitrios; Piro, Oreste; Magnasco, Marcelo O.

2017-05-01

The bulk of studies of coupled oscillators use, as is appropriate in Physics, a global coupling constant controlling all individual interactions. However, because as the coupling is increased, the number of relevant degrees of freedom also increases, this setting conflates the strength of the coupling with the effective dimensionality of the resulting dynamics. We propose a coupling more appropriate to neural circuitry, where synaptic strengths are under biological, activity-dependent control and where the coupling strength and the dimensionality can be controlled separately. Here we study a set of N→ ∞ strongly- and nonsymmetrically-coupled, dissipative, powered, rotational dynamical systems, and derive the equations of motion of the reduced system for dimensions 2 and 4. Our setting highlights the statistical structure of the eigenvectors of the connectivity matrix as the fundamental determinant of collective behavior, inheriting from this structure symmetries and singularities absent from the original microscopic dynamics.

Evaluation of piezoceramic actuators for control of aircraft interior noise

NASA Technical Reports Server (NTRS)

Silcox, Richard J.; Lefebvre, Sylvie; Metcalf, Vern L.; Beyer, Todd B.; Fuller, Chris R.

1992-01-01

Results of an experiment to evaluate piezoceramic actuators as the control actuator for active control of interior noise in a large-scale fuselage model are presented. Control was demonstrated for tonal excitation using a time domain least mean squares algorithm. A maximum of four actuator channels and six error signals were used. The actuators were employed for control of noise at frequencies where interior cavity modes were the dominant response and for driven acoustic responses where a structure resonance was dominant. Global reductions of 9 to 12 dB were obtained for the cases examined. The most effective configuration of skin-mounted actuators was found to be a pure in-plane forcing function as opposed to a bending excitation. The frame-mounted actuators were found to be equally effective as the skin-mounted actuators. However, both configurations resulted in local regions of unacceptably high vibration response in the structure.

Static and fatigue testing of full-scale fuselage panels fabricated using a Therm-X(R) process

NASA Technical Reports Server (NTRS)

Dinicola, Albert J.; Kassapoglou, Christos; Chou, Jack C.

1992-01-01

Large, curved, integrally stiffened composite panels representative of an aircraft fuselage structure were fabricated using a Therm-X process, an alternative concept to conventional two-sided hard tooling and contour vacuum bagging. Panels subsequently were tested under pure shear loading in both static and fatigue regimes to assess the adequacy of the manufacturing process, the effectiveness of damage tolerant design features co-cured with the structure, and the accuracy of finite element and closed-form predictions of postbuckling capability and failure load. Test results indicated the process yielded panels of high quality and increased damage tolerance through suppression of common failure modes such as skin-stiffener separation and frame-stiffener corner failure. Finite element analyses generally produced good predictions of postbuckled shape, and a global-local modelling technique yielded failure load predictions that were within 7% of the experimental mean.

The Use of Plant Antimicrobial Compounds for Food Preservation

PubMed Central

Hintz, Tana; Matthews, Karl K.

2015-01-01

Foodborne disease is a global issue with significant impact on human health. With the growing consumer demand for natural preservatives to replace chemical compounds, plant antimicrobial compounds must be thoroughly investigated for their potential to serve as biopreservatives. This review paper will focus on the plant-derived products as antimicrobial agents for use in food preservation and to control foodborne pathogens in foods. Structure, modes of action, stability, and resistance to these plant compounds will be discussed as well as their application in food industries and possible technologies by which they can be delivered. Benefits as well as challenges, such as the need for further research for implementation and governmental regulation, will be highlighted. PMID:26539472

Long-term changes after brief dynamic psychotherapy: symptomatic versus dynamic assessments.

PubMed

Høglend, P; Sørlie, T; Sørbye, O; Heyerdahl, O; Amlo, S

1992-08-01

Dynamic change in psychotherapy, as measured by theory-related or mode-specific instruments, have been criticized for being too intercorrelated with symptomatic change measures. In this study, long-term changes after brief dynamic psychotherapy were studied in 45 moderately disturbed neurotic patients by a reliable outcome battery. The factor structure of all the change variables suggested that they tapped 2 distinct and stable sources of variance: dynamic and symptomatic change. The categories of overall dynamic change were different from categories of change on the Global Assessment Scale. A small systematic difference was found between the categories of overall dynamic change and the categories of target complaints change also, due to false solutions of dynamic conflicts.

MPS Solidification Model. Volume 2: Operating guide and software documentation for the unsteady model

NASA Technical Reports Server (NTRS)

Maples, A. L.

1981-01-01

The operation of solidification Model 2 is described and documentation of the software associated with the model is provided. Model 2 calculates the macrosegregation in a rectangular ingot of a binary alloy as a result of unsteady horizontal axisymmetric bidirectional solidification. The solidification program allows interactive modification of calculation parameters as well as selection of graphical and tabular output. In batch mode, parameter values are input in card image form and output consists of printed tables of solidification functions. The operational aspects of Model 2 that differ substantially from Model 1 are described. The global flow diagrams and data structures of Model 2 are included. The primary program documentation is the code itself.

Analysis of complex elastic structures by a Rayleigh-Ritz component modes method using Lagrange multipliers. Ph.D. Thesis

NASA Technical Reports Server (NTRS)

Klein, L. R.

1974-01-01

The free vibrations of elastic structures of arbitrary complexity were analyzed in terms of their component modes. The method was based upon the use of the normal unconstrained modes of the components in a Rayleigh-Ritz analysis. The continuity conditions were enforced by means of Lagrange Multipliers. Examples of the structures considered are: (1) beams with nonuniform properties; (2) airplane structures with high or low aspect ratio lifting surface components; (3) the oblique wing airplane; and (4) plate structures. The method was also applied to the analysis of modal damping of linear elastic structures. Convergence of the method versus the number of modes per component and/or the number of components is discussed and compared to more conventional approaches, ad-hoc methods, and experimental results.

Improved Numerical Calculation of the Single-Mode-No-Core-Single-Mode Fiber Structure Using the Fields Far from Cutoff Approximation

PubMed Central

Yang, Xianchao; Xu, Degang; Rong, Feng; Zhao, Junfa; Yao, Jianquan

2017-01-01

Multimode interferometers based on the single-mode-no-core-single-mode fiber (SNCS) structure have been widely investigated as functional devices and sensors. However, the theoretical support for the sensing mechanism is still imperfect, especially for the cladding refractive index response. In this paper, a modified model of no-core fiber (NCF) based on far from cut-off approximation is proposed to investigate the spectrum characteristic and sensing mechanism of the SNCS structure. Guided-mode propagation analysis (MPA) is used to analyze the self-image effect and spectrum response to the cladding refractive index and temperature. Verified by experiments, the performance of the SNCS structure can be estimated specifically and easily by the proposed method. PMID:28961174

Computational modes and the Machenauer N.L.N.M.I. of the GLAS 4th order model. [NonLinear Normal Mode Initialization in numerical weather forecasting

NASA Technical Reports Server (NTRS)

Navon, I. M.; Bloom, S.; Takacs, L. L.

1985-01-01

An attempt was made to use the GLAS global 4th order shallow water equations to perform a Machenhauer nonlinear normal mode initialization (NLNMI) for the external vertical mode. A new algorithm was defined for identifying and filtering out computational modes which affect the convergence of the Machenhauer iterative procedure. The computational modes and zonal waves were linearly initialized and gravitational modes were nonlinearly initialized. The Machenhauer NLNMI was insensitive to the absence of high zonal wave numbers. The effects of the Machenhauer scheme were evaluated by performing 24 hr integrations with nondissipative and dissipative explicit time integration models. The NLNMI was found to be inferior to the Rasch (1984) pseudo-secant technique for obtaining convergence when the time scales of nonlinear forcing were much smaller than the time scales expected from the natural frequency of the mode.

Dynamic functional connectivity reveals altered variability in functional connectivity among patients with major depressive disorder.

PubMed

Demirtaş, Murat; Tornador, Cristian; Falcón, Carles; López-Solà, Marina; Hernández-Ribas, Rosa; Pujol, Jesús; Menchón, José M; Ritter, Petra; Cardoner, Narcis; Soriano-Mas, Carles; Deco, Gustavo

2016-08-01

Resting-state fMRI (RS-fMRI) has become a useful tool to investigate the connectivity structure of mental health disorders. In the case of major depressive disorder (MDD), recent studies regarding the RS-fMRI have found abnormal connectivity in several regions of the brain, particularly in the default mode network (DMN). Thus, the relevance of the DMN to self-referential thoughts and ruminations has made the use of the resting-state approach particularly important for MDD. The majority of such research has relied on the grand averaged functional connectivity measures based on the temporal correlations between the BOLD time series of various brain regions. We, in our study, investigated the variations in the functional connectivity over time at global and local level using RS-fMRI BOLD time series of 27 MDD patients and 27 healthy control subjects. We found that global synchronization and temporal stability were significantly increased in the MDD patients. Furthermore, the participants with MDD showed significantly increased overall average (static) functional connectivity (sFC) but decreased variability of functional connectivity (vFC) within specific networks. Static FC increased to predominance among the regions pertaining to the default mode network (DMN), while the decreased variability of FC was observed in the connections between the DMN and the frontoparietal network. Hum Brain Mapp 37:2918-2930, 2016. © 2016 Wiley Periodicals, Inc. © 2016 The Authors Human Brain Mapping Published by Wiley Periodicals, Inc.

Engineering Graphics Educational Outcomes for the Global Engineer: An Update

ERIC Educational Resources Information Center

Barr, R. E.

2012-01-01

This paper discusses the formulation of educational outcomes for engineering graphics that span the global enterprise. Results of two repeated faculty surveys indicate that new computer graphics tools and techniques are now the preferred mode of engineering graphical communication. Specifically, 3-D computer modeling, assembly modeling, and model…

A symmetry measure for damage detection with mode shapes

NASA Astrophysics Data System (ADS)

Chen, Justin G.; Büyüköztürk, Oral

2017-11-01

This paper introduces a feature for detecting damage or changes in structures, the continuous symmetry measure, which can quantify the amount of a particular rotational, mirror, or translational symmetry in a mode shape of a structure. Many structures in the built environment have geometries that are either symmetric or almost symmetric, however damage typically occurs in a local manner causing asymmetric changes in the structure's geometry or material properties, and alters its mode shapes. The continuous symmetry measure can quantify these changes in symmetry as a novel indicator of damage for data-based structural health monitoring approaches. This paper describes the concept as a basis for detecting changes in mode shapes and detecting structural damage. Application of the method is demonstrated in various structures with different symmetrical properties: a pipe cross-section with a finite element model and experimental study, the NASA 8-bay truss model, and the simulated IASC-ASCE structural health monitoring benchmark structure. The applicability and limitations of the feature in applying it to structures of varying geometries is discussed.

Waves in a plane graphene - dielectric waveguide structure

NASA Astrophysics Data System (ADS)

Evseev, Dmitry A.; Eliseeva, Svetlana V.; Sementsov, Dmitry I.

2017-10-01

The features of the guided TE modes propagation have been investigated on the basis of computer simulations in a planar structure consisting of a set of alternating layers of dielectric and graphene. Within the framework of the effective medium approximation, the dispersion relations have been received for symmetric and antisymmetric waveguide modes, determined by the frequency range of their existence. The wave field distribution by structure, frequency dependences of the constants of propagation and transverse components of the wave vectors, as well as group and phase velocities of waveguide modes have been obtained, the effect of the graphene part in a structure on the waveguide mode behavior has been shown.

Globalization and Dual Modes of Higher Education Policymaking in France: Je T'aime Moi Non Plus. Research & Occasional Paper Series: CSHE.2.11

ERIC Educational Resources Information Center

Hoareau, Cecile

2011-01-01

The French Government has had a paradoxical relationship with globalization. Globalization is perceived as both a threat to react against and a cradle for new policy ideas. French policymakers have a love-hate relationship with the European higher education reforms that started in the 1990s, a mixed sentiment that French singer Serge Gainsbourg…

Hierarchies from D-brane instantons in globally defined calabi-yau orientifolds

DOE PAGES

Cvetič, Mirjam; Weigand, Timo

2008-06-01

We construct the first globally consistent semi-realistic Type I string vacua on an elliptically fibered manifold where the zero modes of the Euclidean D1-instanton sector allow for the generation of non-perturbative Majorana masses of an intermediate scale. In another class of global models, a D1-brane instanton can generate a Polonyi-type superpotential breaking supersymmetry at an exponentially suppressed scale.

Soft-Collinear Mode for Jet Rates in Soft-Collinear Effective Theory

DOE PAGES

Chien, Yang-Ting; Lee, Christopher; Hornig, Andrew

2016-01-29

We propose the addition of a new "soft-collinear" mode to soft collinear effective theory (SCET) below the usual soft scale to factorize and resum logarithms of jet radii R in jet cross sections. We consider exclusive 2-jet cross sections in e +e - collisions with an energy veto Λ on additional jets. The key observation is that there are actually two pairs of energy scales whose ratio is R: the transverse momentum QR of the energetic particles inside jets and their total energy Q, and the transverse momentum ΛR of soft particles that are cut out of the jet cones and their energy Λ. The soft-collinear mode is necessary to factorize and resum logarithms of the latter hierarchy. We show how this factorization occurs in the jet thrust cross section for cone and k T-type algorithms at O(α s) and using the thrust cone algorithm at O(αmore » $$2\\atop{s}$$). We identify the presence of hard-collinear, in-jet soft, global (veto) soft, and soft-collinear modes in the jet thrust cross section. We also observe here that the in-jet soft modes measured with thrust are actually the "csoft" modes of the theory SCET +. We dub the new theory with both csoft and soft-collinear modes "SCET ++". We go on to explain the relation between the "unmeasured" jet function appearing in total exclusive jet cross sections and the hard-collinear and csoft functions in measured jet thrust cross sections. We do not resum logs that are non-global in origin, arising from the ratio of the scales of soft radiation whose thrust is measured at Q$${{\\tau}}$$/R and of the soft-collinear radiation at 2ΛR. Their resummation would require the introduction of additional operators beyond those we consider here. The steps we outline here are a necessary part of summing logs of R that are global in nature and have not been factorized and resummed beyond leading-log level previously.« less