KSC-2014-2918

NASA Image and Video Library

2014-06-13

CAPE CANAVERAL, Fla. -- A gopher tortoise lumbers down the roadway at NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

Biodiversity and Ecology of Amphibians and Reptiles of the Kennedy Space Center: 1998 Close-Out Report to NASA

NASA Technical Reports Server (NTRS)

Sigel, Richard A.

1999-01-01

Since 1992, there have been researchers have been studying the population ecology and conservation biology of the amphibians and reptiles of the Kennedy Space Center (KSC) This research is an outgrowth of my Master's work in the late 1970's under Lew Ehrhart at UCF. The primary emphasis of our studies are (1) examination of long-term changes in the abundance of amphibians and reptile populations, (2) occurrence and effects of Upper Respiratory Tract Disease (URTD) in gopher tortoises (Gopherus polyphemus), and (3) ecological studies of selected species.

KSC-2014-2854

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- A gopher tortoise stops for lunch beside the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

KSC-2014-2852

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- A gopher tortoise ambles along the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

Effects of Military activity and habitat quality on DNA damage and oxidative stress in the largest population of the Federally threatened gopher tortoise.

PubMed

Theodorakis, Christopher W; Adams, S Marshall; Smith, Chandra; Rotter, Jamie; Hay, Ashley; Eslick, Joy

2017-12-01

Department of Defense lands are essential for providing important habitat for threatened, endangered, and at-risk species (TER-S). However, there is little information on the effects of military-related contaminants on TER-S on these lands in field situations. Thus, this study examined genotoxicity and oxidative stress in gopher tortoises (Gopherus polyphemus) on Camp Shelby, MS-the largest known population of this species, which is listed as an "endangered species" in Mississippi and a "threatened species" by the U.S. government. Blood was collected from tortoises at 19 different sites on the base with different levels of habitat quality (high-quality and low-quality habitat) and military activity (high, low, and no military activity). Oxidative stress was quantified as lipid peroxidation and GSSG/GSH ratios, while DNA damage was determined using flow cytometry. Our results suggest that: (1) for tortoises residing in low-quality habitats, oxidative stress and DNA damage increased with increasing military activity, while in high-quality habitats, oxidative stress and DNA damage decreased with increasing military activity; (2) in the absence of military activity, tortoises in high-quality habitat had higher levels of oxidative stress and DNA damage than those in low-quality habitat, and (3) there were interactions between military activity, habitat quality, and landuse in terms of the amount of observable DNA damage and oxidative stress. In particular, on high-quality habitat, tortoises from areas with high levels of military activity had lower levels of oxidative stress and DNA damage biomarkers than on reference sites. This may represent a compensatory or hormetic response. Conversely, on low-quality habitats, the level of oxidative stress and DNA damage was lower on the reference sites. Thus, tortoises on higher-quality habitats may have a greater capacity for compensatory responses. In terms of management implications, it is suggested that low quality habitats should be a higher priority for remediation, and lower priority for conducting military activities.

KSC-2014-2853

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- Slow and steady wins the race for this gopher tortoise, ambling along the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

KSC-2014-2917

NASA Image and Video Library

2014-06-13

CAPE CANAVERAL, Fla. -- This gopher tortoise almost seems to float above the pavement as it hastens along the road at NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

KSC-2014-2851

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- Why did the gopher tortoise cross the road? To get to the other side of the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida, of course. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

More than Fever: Thermoregulatory Responses to Immunological Stimulation and Consequences of Thermoregulatory Strategy on Innate Immunity in Gopher Tortoises (Gopherus polyphemus).

PubMed

Goessling, Jeffrey M; Guyer, Craig; Mendonça, Mary T

Organisms possess a range of thermoregulatory strategies that may vary in response to sickness, thereby driving important life-history consequences. Because the immune system is vital to maintaining organism function, understanding the suite of immune responses to infection indicates basic costs and benefits of physiological strategies. Here, we assessed consequences of thermoregulation and seasonality on immune function in both immunologically stimulated and nonstimulated gopher tortoises (Gopherus polyphemus). An ectothermic vertebrate was used as an experimental model because the effects of thermoregulation on immunity remain understudied and are of increasing importance in light of anthropogenic alterations to thermal environments. We found that G. polyphemus increased body temperature (T b ) at 1 h after injection with lipopolysaccharide (LPS) when compared with saline controls (P = 0.04), consistent with behavioral fever. LPS increased plasma bactericidal ability (BA; P = 0.006), reduced plasma iron concentration (P = 0.041), and increased heterophil∶lymphocyte ratios (P < 0.001). In nonstimulated animals, thermoregulatory strategy had a strong effect on innate immunity, which demonstrated that individuals have the ability to facultatively adjust immune function when infection burden is low; this relationship was not present in LPS-injected animals, which suggested that animals stimulated with LPS maximize bactericidal ability independently of temperature. Seasonal acclimation state did not influence responses to LPS, although baseline plasma iron was significantly lower in animals acclimated to winter. These results support that a trade-off exists between immunity and other conflicting physiological interests. Moreover, these results clearly demonstrate the ability of individuals to modulate immune function as a direct result of thermoregulatory decisions.

GOPHERUS AGASSIZII

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boone, James L.; Rakestraw, Danny L.; Rautenstrauch, Kurt R.

1997-12-16

GOPHERLTS AGAISSIZII (Desert Tortoise). Predation. A variety of predators, most notably coyotes (Canis Iatrans) and Common Ravens (Corvis corau) have been reported to prey on hatchling desert tortoises (Emst et al. 1994). Turtles of the United States and Canada (Smithsonian Institution Press, Washington, D.C. 578 pp.). Here, we report an observation of a hatchling tortoise, fitted with a radiotransmitter, that was preyed upon by native fire ants (Solenopsis sp.) in the eastern Mojave Desert at Yucca Mountain, Nevada (36 degrees 50 minutes N, 116 degree 25 minutes E). On 8/27/94, tortoise No.9315 (carapace length = 45 mm, age = 5more » d) was found alive with eyes, chin, and parts of the head and legs being eaten by ants. The tortoise was alive, but lethargic, and responded little when touched. Eight of 74 other radiomarked hatchlings monitored at Yucca Mountain during 1992-1994 were found dead with fire ants on their carcass 3-7 days after the hatchlings emerged from their nests. It is not known whether those tortoises were killed by ants or were being scavenged when found. While imported fire ants (S. invicta) have long been known to kill hatchling gopher tortoises (G. polyphemus; Mount 1981. J. Alabama Acad. Sci. 52: 71-78), native fire ants have previously not been implicated as predators of desert tortoises. However, only 1 of 75 (or at worst 9 of 75) was killed by fire ants, suggesting that although fire ants do kill hatchlings, they were not important predators on desert tortoises during this study. Tortoise specimens were deposited at the University of California at Berkeley.« less

Existing Geospatial Knowledge of Gopher Tortoise Population and Abundance

DTIC Science & Technology

2007-05-01

2 Figure A1. Gopher tortoise Alabama habitat map ................................................................................ 14 Figure A2...12 Table A3. Alabama data (Federal...15 Table A4. Alabama data (state

Identifying genome-wide immune gene variation underlying infectious disease in wildlife populations - a next generation sequencing approach in the gopher tortoise.

PubMed

Elbers, Jean P; Brown, Mary B; Taylor, Sabrina S

2018-01-19

Infectious disease is the single greatest threat to taxa such as amphibians (chytrid fungus), bats (white nose syndrome), Tasmanian devils (devil facial tumor disease), and black-footed ferrets (canine distemper virus, plague). Although understanding the genetic basis to disease susceptibility is important for the long-term persistence of these groups, most research has been limited to major-histocompatibility and Toll-like receptor genes. To better understand the genetic basis of infectious disease susceptibility in a species of conservation concern, we sequenced all known/predicted immune response genes (i.e., the immunomes) in 16 Florida gopher tortoises, Gopherus polyphemus. All tortoises produced antibodies against Mycoplasma agassizii (an etiologic agent of infectious upper respiratory tract disease; URTD) and, at the time of sampling, either had (n = 10) or lacked (n = 6) clinical signs. We found several variants associated with URTD clinical status in complement and lectin genes, which may play a role in Mycoplasma immunity. Thirty-five genes deviated from neutrality according to Tajima's D. These genes were enriched in functions relating to macromolecule and protein modifications, which are vital to immune system functioning. These results are suggestive of genetic differences that might contribute to disease severity, a finding that is consistent with other mycoplasmal diseases. This has implications for management because tortoises across their range may possess genetic variation associated with a more severe response to URTD. More generally: 1) this approach demonstrates that a broader consideration of immune genes is better able to identify important variants, and; 2) this data pipeline can be adopted to identify alleles associated with disease susceptibility or resistance in other taxa, and therefore provide information on a population's risk of succumbing to disease, inform translocations to increase genetic variation for disease resistance, and help to identify potential treatments.

Gopherus agassizii: Desert tortoise

USGS Publications Warehouse

Berry, Kristen H.; Swingland, Ian Richard; Klemens, Michael W.

1989-01-01

The desert tortoise is one of four allopatric North American tortoises. It occurs in the Mojave and Sonoran deserts of the southwestern United States and Mexico.Auffenberg (1976) divided the genus Gopherus (consisting of four species, G. agassizi, G. berlandieri, G.flavomarginatus, and G. polyphemus) in two osteological groups. Bramble (1982), using morphological and palaeontological data, divided the genus Gopherus into two separate complexes, each with two species. He established a new genus, Scaptochelys, for agassizi and berlandieri, retaining Gopherus for polyphemus and flavomarginatus. Bour and Dubois (1984) noted that Xerobates Agassiz had priority over Scaptochelys Bramble. Using mitochondrial DNA (mtDNA), Lamb et al. (1989) evaluated the evolutionary relationships of the North American tortoises, particularly the desert tortoise. They concluded that the mtDNA analysis provides strong support for generic recognition of the two distinct species groups described by Bramble (1982).Until a few decades ago, the desert tortoise was widespread at lower elevations throughout the Mojave and Sonoran deserts of the U.S.A. In the northern and western parts of the geographic range, large and relatively homogeneous populations with densities exceeding 1,000/sq km extended throughout parts of California, and probably into Nevada and Utah. In terms of biomass, the tortoise played an important role in the ecosystems. In most areas, numbers have declined dramatically and the extent of populations has been reduced. Most populations are now isolated and low in numbers. Conservation of the desert tortoise is a highly visible and political issue in the U.S.A., but not in Mexico.

Mycoplasma agassizii in Morafka's desert tortoise (Gopherus morafkai) in Mexico.

PubMed

Berry, Kristin H; Brown, Mary B; Vaughn, Mercy; Gowan, Timothy A; Hasskamp, Mary Ann; Torres, Ma Cristina Meléndez

2015-01-01

We conducted health evaluations of 69 wild and 22 captive Morafka's desert tortoises (Gopherus morafkai) in Mexico between 2005 and 2008. The wild tortoises were from 11 sites in the states of Sonora and Sinaloa, and the captive tortoises were from the state-managed Centro Ecológico de Sonora Zoo in Hermosillo and a private residence in the town of Alamos. We tested 88 tortoises for mycoplasmal upper respiratory tract disease (URTD) using enzyme-linked immunosorbent assays for specific antibody and by culture and PCR for detection of Mycoplasma agassizii and Mycoplasma testudineum. Fifteen of 22 captive tortoises had one or more positive diagnostic test results for M. agassizii whereas no wild tortoises had positive tests. Tortoises with positive tests also had significantly more moderate and severe clinical signs of mycoplasmosis on beaks and nares compared to tortoises with negative tests. Captive tortoises also exhibited significantly more clinical signs of illness than did wild tortoises, including lethargy and moderate to severe ocular signs. The severity of trauma and diseases of the shell and integument did not differ significantly among tortoises by site; however, clinical signs of moderate to severe trauma and disease were more prevalent in older tortoises. Similar to research findings for other species in the genus Gopherus in the US, we found that URTD is an important disease in captive tortoises. If they escape or are released by intention or accident to the wild, captive tortoises are likely to pose risks to healthy, naïve wild populations.

Final Environmental Assessment of Construction of Emerald Coast Technology and Research Campus at the University of Florida Reserarch Engineering Education Facility at Eglin Air Force Base, Florida

DTIC Science & Technology

2012-03-01

document should be directed to Mr. Larry Chavers. Public comments should be directed to Mr. Mike Spaits. Mr. Chavers and Mr. Spaits can be reached...Section. • Should a gopher tortoise burrow be identified within the proposed path of construction by construction personnel, work will cease until...Natural Resources personnel have investigated the burrow and relocated any gopher tortoise or commensals to a suitable location. 3 • Gopher tortoise and

The dazed and confused identity of Agassiz’s land tortoise, Gopherus agassizii (Testudines, Testudinidae) with the description of a new species, and its consequences for conservation

PubMed Central

Murphy, Robert W.; Berry, Kristin H.; Edwards, Taylor; Leviton, Alan E.; Lathrop, Amy; Riedle, J. Daren

2011-01-01

Abstract We investigate a cornucopia of problems associated with the identity of the desert tortoise, Gopherus agassizii (Cooper). The date of publication is found to be 1861, rather than 1863. Only one of the three original cotypes exists, and it is designated as the lectotype of the species. Another cotype is found to have been destroyed in the 1906 San Francisco earthquake and subsequent fire. The third is lost. The lectotype is genetically confirmed to be from California, and not Arizona, USA as sometimes reported. Maternally, the holotype of Gopherus lepidocephalus (Ottley & Velázques Solis. 1989) from the Cape Region of Baja California Sur, Mexico is also from the Mojavian population of the desert tortoise, and not from Tiburon Island, Sonora, Mexico as previously proposed. A suite of characters serve to diagnose tortoises west and north of the Colorado River, the Mojavian population, from those east and south of the river in Arizona, USA, and Sonora and Sinaloa, Mexico, the Sonoran population. Species recognition is warranted and because Gopherus lepidocephalus is from the Mojavian population, no names are available for the Sonoran species. Thus, a new species, Gopherus morafkai sp. n., is named and this action reduces the distribution of Gopherus agassizii to only 30% of its former range. This reduction has important implications for the conservation and protection of Gopherus agassizii, which may deserve a higher level of protection. PMID:21976992

PCR primers for microsatellite loci in the desert tortoise (Gopherus agassizii, Testudinidae)

USGS Publications Warehouse

Edwards, T.; Goldberg, C.S.; Kaplan, M.E.; Schwalbe, C.R.; Swann, D.E.

2003-01-01

The desert tortoise, Gopherus agassizii, is a threatened species native to the North American desert southwest and is recognized as having distinct Mojave and Sonoran populations. We identified six polymorphic microsatellite loci in the desert tortoise. All six loci were polymorphic in Sonoran samples. Five of the loci were variable in Mojave samples with varying degrees of amplification success. Two of the loci exhibited low allelic variation (2-3 alleles) while four were highly variable (8-27 alleles).

Mycoplasma testudineum in free-ranging desert tortoises, Gopherus agassizii.

PubMed

Jacobson, Elliott R; Berry, Kristin H

2012-10-01

We performed clinico-pathological evaluations of 11 wild Agassiz's desert tortoises (Gopherus agassizii) from a translocation project in the central Mojave Desert, California, USA. Group 1 consisted of nine tortoises that were selected primarily due to serologic status, indicating exposure to Mycoplasma testudineum (seven) or both M. agassizii and M. testudineum (two), and secondarily due to clinical signs of upper respiratory tract disease (URTD). Group 2 consisted of two tortoises that were antibody-negative for Mycoplasma and had no clinical signs of URTD, but did have other signs of illness. Of the Group 1 tortoises, M. testudineum, but not M. agassizii, was amplified by polymerase chain reaction and DNA fingerprinted from two tortoises. Using light microscopy, mild to severe pathologic changes were observed in one or more histologic sections of either one or both nasal cavities of each tortoise in Group 1. Our findings support a causal relationship between M. testudineum and URTD in desert tortoises.

Mycoplasma testudineum in free-ranging desert tortoises, Gopherus agassizii

USGS Publications Warehouse

Jacobson, Elliott R.; Berry, Kristin H.

2012-01-01

We performed clinico-pathological evaluations of 11 wild Agassiz's desert tortoises (Gopherus agassizii) from a translocation project in the central Mojave Desert, California, USA. Group 1 consisted of nine tortoises that were selected primarily due to serologic status, indicating exposure to Mycoplasma testudineum (seven) or both M. agassizii and M. testudineum (two), and secondarily due to clinical signs of upper respiratory tract disease (URTD). Group 2 consisted of two tortoises that were antibody-negative for Mycoplasma and had no clinical signs of URTD, but did have other signs of illness. Of the Group 1 tortoises, M. testudineum, but not M. agassizii, was amplified by polymerase chain reaction and DNA fingerprinted from two tortoises. Using light microscopy, mild to severe pathologic changes were observed in one or more histologic sections of either one or both nasal cavities of each tortoise in Group 1. Our findings support a causal relationship between M. testudineum and URTD in desert tortoises.

KSC-07pd1855

NASA Image and Video Library

2007-07-11

KENNEDY SPACE CENTER, FLA. -- A gopher tortoise searches for food at the edge of a road near Launch Pad 39A. Their primary food sources are low-growing grasses and herbs, with their favorite foods being gopher apple and saw palmetto berries. They will eat the pads, fruits, and flowers of prickly pear cactus as well. They will occasionally also eat bones from dead animals, presumably to get calcium. The gopher tortoise is a cold-blooded reptile that averages 10 inches in length and 9 pounds in weight. Wild tortoises may live from 40 - 60 years, while tortoises in captivity can live more than 100 years. Their range extends from southeastern Louisiana to southeastern South Carolina and throughout all 67 counties in Florida. The gopher tortoise is federally protected as a threatened species except in Florida, where it is listed as a Species of Special Concern by the Florida Fish and Wildlife Conservation Commission. Lands surrounding the Kennedy Space Center are part of the Merritt Island National Wildlife Refuge. Approximately one half of the Refuge's 140,000 acres consists of brackish estuaries and marshes. The remaining lands consist of coastal dunes, scrub oaks, pine forests and flatwoods, and palm and oak hammocks. Photo credit: NASA/Ken Thornsley

KSC-07pd1856

NASA Image and Video Library

2007-07-11

KENNEDY SPACE CENTER, FLA. -- A gopher tortoise searches for food at the edge of a road near Launch Pad 39A. Their primary food sources are low-growing grasses and herbs, with their favorite foods being gopher apple and saw palmetto berries. They will eat the pads, fruits, and flowers of prickly pear cactus as well. They will occasionally also eat bones from dead animals, presumably to get calcium. The gopher tortoise is a cold-blooded reptile that averages 10 inches in length and 9 pounds in weight. Wild tortoises may live from 40 - 60 years, while tortoises in captivity can live more than 100 years. Their range extends from southeastern Louisiana to southeastern South Carolina and throughout all 67 counties in Florida. The gopher tortoise is federally protected as a threatened species except in Florida, where it is listed as a Species of Special Concern by the Florida Fish and Wildlife Conservation Commission. Lands surrounding the Kennedy Space Center are part of the Merritt Island National Wildlife Refuge. Approximately one half of the Refuge's 140,000 acres consists of brackish estuaries and marshes. The remaining lands consist of coastal dunes, scrub oaks, pine forests and flatwoods, and palm and oak hammocks. Photo credit: NASA/Ken Thornsley

KSC-07pd1857

NASA Image and Video Library

2007-07-11

KENNEDY SPACE CENTER, FLA. -- A gopher tortoise searches for food at the edge of a road near Launch Pad 39A. Their primary food sources are low-growing grasses and herbs, with their favorite foods being gopher apple and saw palmetto berries. They will eat the pads, fruits, and flowers of prickly pear cactus as well. They will occasionally also eat bones from dead animals, presumably to get calcium. The gopher tortoise is a cold-blooded reptile that averages 10 inches in length and 9 pounds in weight. Wild tortoises may live from 40 - 60 years, while tortoises in captivity can live more than 100 years. Their range extends from southeastern Louisiana to southeastern South Carolina and throughout all 67 counties in Florida. The gopher tortoise is federally protected as a threatened species except in Florida, where it is listed as a Species of Special Concern by the Florida Fish and Wildlife Conservation Commission. Lands surrounding the Kennedy Space Center are part of the Merritt Island National Wildlife Refuge. Approximately one half of the Refuge's 140,000 acres consists of brackish estuaries and marshes. The remaining lands consist of coastal dunes, scrub oaks, pine forests and flatwoods, and palm and oak hammocks. Photo credit: NASA/Ken Thornsley

Biogeographic perspective of speciation among desert tortoises in the genus Gopherus: A preliminary evaluation

Treesearch

Taylor Edwards; Mercy Vaughn; Cristina Melendez Torres; Alice E. Karl; Philip C. Rosen; Kristin H. Berry; Robert W. Murph

2013-01-01

The enduring processes of time, climate, and adaptation have sculpted the distribution of organisms we observe in the Sonoran Desert. One such organism is Morafka’s desert tortoise, Gopherus morafkai. We apply a genomic approach to identify the evolutionary processes driving diversity in this species and present preliminary findings and emerging hypotheses. The Sonoran...

Detection of Mycoplasma agassizii in the Texas Tortoise (Gopherus berlandieri)

USGS Publications Warehouse

Guthrie, Amanda L.; White, C. LeAnn; Brown, Mary B.; deMaar, Thomas W.

2013-01-01

Mycoplasma agassizii causes upper respiratory tract disease (URTD) in Texas tortoises (Gopherus berlandieri). To determine exposure to and shedding of M. agassizii, we collected blood samples and nasal swabs from 40 free-ranging Texas tortoises on public and private lands in Texas, USA, from May to October 2009. We used an enzyme-linked immunosorbent assay (ELISA) to detect M. agassizii–specific antibodies. Eleven (28%) tortoises were antibody positive, three (8%) were suspect, and the remaining 26 (65%) were negative. Nasal lavage samples were collected from 35 of the 40 tortoises for M. agassizii culture and PCR to detect shedding of M. agassizii. Current infection with M. agassizii was confirmed in one tortoise that had mild clinical signs of URTD and was positive by ELISA (antibody titer >512), PCR, and culture. The clinical isolate was confirmed as M. agassizii by restriction fragment length polymorphism and immunobinding.

If Animals Could Talk: Bald Eagle, Bear, Florida Panther, Gopher Tortoise, Indigo Snake, Manatee, Otter, Raccoon.

ERIC Educational Resources Information Center

Pinellas County District School Board, Clearwater, FL.

In this series of booklets, eight Florida animals describe their appearance, habitats, food, behavior, and relationships with humans. Each entry is written for elementary students from the animal's point of view and includes a bibliography. Contained are the life stories of the bald eagle, black bear, Florida panther, gopher tortoise, Eastern…

78 FR 27421 - Endangered and Threatened Wildlife and Plants; Receipt of Application for Incidental Take Permit...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-10

... gopher tortoise. In advance of the progression of the mining operations into future phases, quantitative surveys will be conducted for the skinks and gopher tortoises to determine the occupancy and extent of occupancy within these suitable areas. The completion of these surveys will be subject to the guidelines at...

Are captive tortoises a reservoir for conservation? An assessment of genealogical affiliation of captive Gopherus agassizii to local, wild populations

USGS Publications Warehouse

Berry, Kristin H.; Edwards, Taylor

2013-01-01

The conservation of tortoises poses a unique situation because several threatened species are commonly kept as pets within their native ranges. Thus, there is potential for captive populations to be a reservoir for repatriation efforts. We assess the utility of captive populations of the threatened Agassiz’s desert tortoise (Gopherus agassizii) for recovery efforts based on genetic affinity to local areas. We collected samples from 130 captive desert tortoises from three desert communities: two in California (Ridgecrest and Joshua Tree) and the Desert Tortoise Conservation Center (Las Vegas) in Nevada. We tested all samples for 25 short tandem repeats and sequenced 1,109 bp of the mitochondrial genome. We compared captive genotypes to a database of 1,258 Gopherus samples, including 657 wild caught G. agassizii spanning the full range of the species. We conducted population assignment tests to determine the genetic origins of the captive individuals. For our total sample set, only 44 % of captive individuals were assigned to local populations based on genetic units derived from the reference database. One individual from Joshua Tree, California, was identified as being a Morafka’s desert tortoise, G. morafkai, a cryptic species which is not native to the Mojave Desert. Our data suggest that captive desert tortoises kept within the native range of G. agassizii cannot be presumed to have a genealogical affiliation to wild tortoises in their geographic proximity. Precautions should be taken before considering the release of captive tortoises into the wild as a management tool for recovery.

Desert tortoise (Gopherus agassizii): Status-of-knowledge outline with references

Treesearch

Mark C. Grover; Lesley A. DeFalco

1995-01-01

Provides an overview of extant desert tortoise literature, summarizing literature on taxonomy, morphology, genetics, and paleontology and paleoecology of the desert tortoise, as well as its general ecology. Literature on desert tortoise ecology encompasses distribution and habitat, burrows and dens, reproduction, growth, physiology, feeding and nutrition, mortality...

Nelson's big horn sheep (Ovis canadensis nelsoni) trample Agassiz's desert tortoise (Gopherus agassizii) burrow at a California wind energy facility

USGS Publications Warehouse

Agha, Mickey; Delaney, David F.; Lovich, Jeffrey E.; Briggs, Jessica; Austin, Meaghan; Price, Steven J.

2015-01-01

Research on interactions between Agassiz's desert tortoises (Gopherus agassizii) and ungulates has focused exclusively on the effects of livestock grazing on tortoises and their habitat (Oldemeyer, 1994). For example, during a 1980 study in San Bernardino County, California, 164 desert tortoise burrows were assessed for vulnerability to trampling by domestic sheep (Ovis aries). Herds of grazing sheep damaged 10% and destroyed 4% of the burrows (Nicholson and Humphreys 1981). In addition, a juvenile desert tortoise was trapped and an adult male was blocked from entering a burrow due to trampling by domestic sheep. Another study found that domestic cattle (Bos taurus) trampled active desert tortoise burrows and vegetation surrounding burrows (Avery and Neibergs 1997). Trampling also has negative impacts on diversity of vegetation and intershrub soil crusts in the desert southwest (Webb and Stielstra 1979). Trampling of important food plants and overgrazing has the potential to create competition between desert tortoises and domestic livestock (Berry 1978; Coombs 1979; Webb and Stielstra 1979).

Modeling Agassiz's Desert Tortoise Population Response to Anthropogenic Stressors

EPA Science Inventory

Mojave Desert tortoise (Gopherus agassizii) populations are exposed to a variety of anthropogenic threats, which vary in nature, severity, and frequency. Tortoise management in conservation areas can be compromised when the relative importance of these threats is not well underst...

Serologic and molecular evidence for testudinid herpesvirus 2 infection in wild Agassiz’s desert tortoise, Gopherus agassizii

USGS Publications Warehouse

Jacobson, Elliott R.; Berry, Kristin H.; Wellehan, James F. X.; Origgi, Francesco; Childress, April L.; Braun, Josephine; Schrenzel, Mark; Yee, Julie; Rideout, Bruce

2012-01-01

Following field observations of wild Agassiz’s desert tortoises (Gopherus agassizii) with oral lesions similar to those seen in captive tortoises with herpesvirus infection, we measured the prevalence of antibodies to Testudinid herpesvirus (TeHV) 3 in wild populations of desert tortoises in California. The survey revealed 30.9% antibody prevalence. In 2009 and 2010, two wild adult male desert tortoises, with gross lesions consistent with trauma and puncture wounds, respectively, were necropsied. Tortoise 1 was from the central Mojave Desert and tortoise 2 was from the northeastern Mojave Desert. We extracted DNA from the tongue of tortoise 1 and from the tongue and nasal mucosa of tortoise 2. Sequencing of polymerase chain reaction products of the herpesviral DNA-dependent DNA polymerase gene and the UL39 gene respectively showed 100% nucleotide identity with TeHV2, which was previously detected in an ill captive desert tortoise in California. Although several cases of herpesvirus infection have been described in captive desert tortoises, our findings represent the first conclusive molecular evidence of TeHV2 infection in wild desert tortoises. The serologic findings support cross-reactivity between TeHV2 and TeHV3. Further studies to determine the ecology, prevalence, and clinical significance of this virus in tortoise populations are needed.

Serologic and molecular evidence for Testudinid herpesvirus 2 infection in wild Agassiz's desert tortoises, Gopherus agassizii.

PubMed

Jacobson, Elliott R; Berry, Kristin H; Wellehan, James F X; Origgi, Francesco; Childress, April L; Braun, Josephine; Schrenzel, Mark; Yee, Julie; Rideout, Bruce

2012-07-01

Following field observations of wild Agassiz's desert tortoises (Gopherus agassizii) with oral lesions similar to those seen in captive tortoises with herpesvirus infection, we measured the prevalence of antibodies to Testudinid herpesvirus (TeHV) 3 in wild populations of desert tortoises in California. The survey revealed 30.9% antibody prevalence. In 2009 and 2010, two wild adult male desert tortoises, with gross lesions consistent with trauma and puncture wounds, respectively, were necropsied. Tortoise 1 was from the central Mojave Desert and tortoise 2 was from the northeastern Mojave Desert. We extracted DNA from the tongue of tortoise 1 and from the tongue and nasal mucosa of tortoise 2. Sequencing of polymerase chain reaction products of the herpesviral DNA-dependent DNA polymerase gene and the UL39 gene respectively showed 100% nucleotide identity with TeHV2, which was previously detected in an ill captive desert tortoise in California. Although several cases of herpesvirus infection have been described in captive desert tortoises, our findings represent the first conclusive molecular evidence of TeHV2 infection in wild desert tortoises. The serologic findings support cross-reactivity between TeHV2 and TeHV3. Further studies to determine the ecology, prevalence, and clinical significance of this virus in tortoise populations are needed.

Effects of desert wildfires on desert tortoise (Gopherus agassizii) and other small vertebrates

USGS Publications Warehouse

Esque, T.C.; Schwalbe, C.R.; DeFalco, L.A.; Duncan, R.B.; Hughes, T.J.

2003-01-01

We report the results of standardized surveys to determine the effects of wildfires on desert tortoises (Gopherus agassizii) and their habitats in the northeastern Mojave Desert and northeastern Sonoran Desert. Portions of 6 burned areas (118 to 1,750 ha) were examined for signs of mortality of vertebrates. Direct effects of fire in desert habitats included animal mortality and loss of vegetation cover. A range of 0 to 7 tortoises was encountered during surveys, and live tortoises were found on all transects. In addition to desert tortoises, only small (<1 kg) mammals and reptiles (11 taxa) were found dead on the study areas. We hypothesize that indirect effects of fire on desert habitats might result in changes in the composition of diets and loss of vegetation cover, resulting in an increase in predation and loss of protection from temperature extremes. These changes in habitat also might cause changes in vertebrate communities in burned areas.

Turtles and culverts, and alternative energy development: an unreported but potentially significant mortality threat to the desert tortoise (Gopherus agassizii)

USGS Publications Warehouse

Lovich, J.E.; Ennen, J.R.; Madrak, S.; Grover, B.

2011-01-01

Culverts are often used to increase the permeability of roaded landscapes for wildlife, including turtles. Although the benefits of culverts as safe passages for turtles are well documented, under some conditions culverts can entrap them and cause mortality. Here we report a culvert-related mortality in the federally threatened desert tortoise (Gopherus agassizii) at a wind energy facility in California and offer simple recommendations to mitigate the negative effects of culverts for wildlife in general.

Final Environmental Assessment for the Bridge Replacement and Scour Protection Measures at Avon Park Air Force Range, Florida

DTIC Science & Technology

2012-03-01

stipulated in the permit. Potential indigo snake refugia: gopher tortoise burrows , active or inactive, other holes, ground cavities, and root hollows...holes, cavities, and snake refugia other than gopher tortoise burrows will be inspected each morning before planned site manipulation of a particular...University 1999 Years Experience: 12 Larry McLain Operational Transportation Manager and Range Maintenance Manager Clarence Morgan Rangeland

Gopherus agassizii (desert tortoise) and Crotalus ruber (red diamond rattlesnake). Burrow co-occupancy

USGS Publications Warehouse

Lovich, Jeffrey E.

2011-01-01

I observed an adult Desert Tortoise and an adult Red Diamond Rattlesnake (sexes unknown) in a shallow tortoise burrow on 6 January 1997 at a wind energy generation facility near Palm Springs, Riverside Co., California, USA (33.9599°N, 116.6613°W).

Desert Tortoise Head-start Program at Twentynine Palms Marine Base

DTIC Science & Technology

2013-04-02

Hillard. Shell hardness measurement in juvenile desert tortoises, Gopherus agassizii, Herpetological Review, (09 2011): 0. doi: 07/23/2012 2.00...yearlings released to the open desert. Herpetological Conservation and Biology.

Nest guarding by female Agassiz's desert tortoise (Gopherus agassizii) at a wind-energy facility near Palm Springs, California

USGS Publications Warehouse

Agha, Mickey; Lovich, Jeffrey E.; Ennen, Joshua R.; Wilcox, Ethan

2013-01-01

We observed behavior consistent with nest-guarding in Agassiz's desert tortoise (Gopherus agassizii) at two nests in a large wind-energy-generation facility near Palm Springs, California, locally known as the Mesa Wind Farm. As researchers approached the nests, female desert tortoises moved to the entrance of their burrows and positioned themselves sideways, directly over their nests. One female stretched her limbs outward and wedged herself into the burrow (her plastron directly above the nest). Guarding of nests is rarely observed in Agassiz's desert tortoise but can occur as a result of attempted predation on eggs by Gila monsters (Heloderma suspectum) or in direct response to the perceived threat posed by researchers. This is the first report of nest-guarding for G. agassizii in the Sonoran Desert ecosystem of California.

KSC-05PD-1595

NASA Technical Reports Server (NTRS)

2005-01-01

KENNEDY SPACE CENTER, FLA. This gopher tortoise eats its way through the grass alongside Kennedy Parkway at NASA Kennedy Space Center. The sandy soils of Florida are prime habitat for the species, the only one in Florida. Gopher tortoises thrive in many of our ecosystems, pine-oak sandhills, oak hammocks, prairies, flatwoods and coastal dunes. This and other wildlife abound throughout KSC as it shares a boundary with the Merritt Island National Wildlife Refuge, home to some of the nations rarest and most unusual species of wildlife. The wildlife refuge is a habitat for more than 310 species of birds, 25 mammals, 117 fishes and 65 amphibians and reptiles. In addition, the Refuge supports 19 endangered or threatened wildlife species on Federal or State lists, more than any other single refuge in the U.S. Gopher tortoises are protected by law in Florida and are listed as a Species of Special Concern.

KSC-05pd2344

NASA Image and Video Library

2005-10-07

KENNEDY SPACE CENTER, FLA. - A gopher tortoise makes its way down the hill behind the NASA KSC News Center. The sandy soils of Florida are prime habitat for the species, the only one in Florida. Gopher tortoises thrive in many of our ecosystems, pine-oak sandhills, oak hammocks, prairies, flatwoods and coastal dunes. This and other wildlife abound throughout KSC as it shares a boundary with the Merritt Island National Wildlife Refuge, home to some of the nation’s rarest and most unusual species of wildlife. The wildlife refuge is a habitat for more than 310 species of birds, 25 mammals, 117 fishes and 65 amphibians and reptiles. In addition, the Refuge supports 19 endangered or threatened wildlife species on Federal or State lists, more than any other single refuge in the U.S. Gopher tortoises are protected by law in Florida and are listed as a Species of Special Concern.

Are wildlife detector dogs or people better at finding Desert Tortoises (Gopherus agassizii)?

USGS Publications Warehouse

Nussear, K.E.; Esque, T.C.; Heaton, J.S.; Cablk, Mary E.; Drake, K.K.; Valentin, C.; Yee, J.L.; Medica, P.A.

2008-01-01

Our ability to study threatened and endangered species depends on locating them readily in the field. Recent studies highlight the effectiveness of trained detector dogs to locate wildlife during field surveys, including Desert Tortoises in a semi-natural setting. Desert Tortoises (Gopherus agassizii) are cryptic and difficult to detect during surveys, especially the smaller size classes. We conducted comparative surveys to determine whether human or detector dog teams were more effective at locating Desert Tortoises in the wild. We compared detectability of Desert Tortoises and the costs to deploy human and dog search teams. Detectability of tortoises was not statistically different for either team, and was estimated to be approximately 70% (SE = 5%). Dogs found a greater proportion of tortoises located in vegetation than did humans. The dog teams finished surveys 2.5 hours faster than the humans on average each day. The human team cost was approximately $3,000 less per square kilometer sampled. Dog teams provided a quick and effective method for surveying for adult Desert Tortoises; however, we were unable to determine-their effectiveness at locating smaller size classes. Detection of smaller size classes during surveys would improve management of the species and should be addressed by future research using Desert Tortoise detector dogs.

Mycoplasma agassizii in Morafka's desert tortoise (Gopherus morafkai) in Mexico

USGS Publications Warehouse

Berry, Kristin H.; Brown, Mary B.; Vaughn, Mercy; Gowan, Timothy A.; Hasskamp, Mary Ann; Torres, Ma. Cristina Melendez

2015-01-01

We conducted health evaluations of 69 wild and 22 captive Morafka's desert tortoises (Gopherus morafkai) in Mexico between 2005 and 2008. The wild tortoises were from 11 sites in the states of Sonora and Sinaloa, and the captive tortoises were from the state-managed Centro Ecológico de Sonora Zoo in Hermosillo and a private residence in the town of Alamos. We tested 88 tortoises for mycoplasmal upper respiratory tract disease (URTD) using enzyme-linked immunosorbent assays for specific antibody and by culture and PCR for detection of Mycoplasma agassizii and Mycoplasma testudineum. Fifteen of 22 captive tortoises had one or more positive diagnostic test results for M. agassizii whereas no wild tortoises had positive tests. Tortoises with positive tests also had significantly more moderate and severe clinical signs of mycoplasmosis on beaks and nares compared to tortoises with negative tests. Captive tortoises also exhibited significantly more clinical signs of illness than did wild tortoises, including lethargy and moderate to severe ocular signs. The severity of trauma and diseases of the shell and integument did not differ significantly among tortoises by site; however, clinical signs of moderate to severe trauma and disease were more prevalent in older tortoises. Similar to research findings for other species in the genus Gopherusin the US, we found that URTD is an important disease in captive tortoises. If they escape or are released by intention or accident to the wild, captive tortoises are likely to pose risks to healthy, naïve wild populations.

Long-term growth of Desert Tortoises (Gopherus agassizii) in a southern Nevada population

USGS Publications Warehouse

Medica, P.A.; Nussear, Kenneth E.; Esque, Todd C.; Saethre, Mary B.

2012-01-01

Knowledge of growth rates, age at maturity, and longevity are important aspects of a species life history and are directly applicable to life table creation and population viability analyses. We measured the growth of a cohort of 17 semi-wild Desert Tortoises (Gopherus agassizii) located in Rock Valley, Nevada over a 47-yr period beginning in 1963. The tortoises were initially marked as hatchling and juvenile animals between the years 1963 and 1965 and ranged in size from 47 to 77 mm in plastron length. We assigned ages of 1-4 yr to the tortoises at initial capture based on their body size. These tortoises were recaptured, measured, and weighed approximately annually since their initial capture. Growth of male and female tortoises did not differ significantly until animals reached the age of 23-25 yr. Annual tortoise growth was correlated with the production of ephemeral vegetation, while accounting for size, sex, and repeated measurements of the animals as well as the interval between measurements. However, the production of ephemeral plants was likewise highly correlated (non-linearly) with winter rainfall. Stochastic predation events between 2003 and 2007 decimated this cohort of tortoises. The average age of the long-term surviving tortoises from this cohort was 43 yr with a range of 39-47 yr. Twelve of the tortoises survived to the age of 39 yr and 11 of the 12 reached 40 yr.

Does protection of desert tortoise habitat generate other ecological benefits in the Mojave Desert?

Treesearch

Matthew L. Brooks

2000-01-01

This paper summarizes the ecological effects of fenced habitat protection for the desert tortoise (Gopherus agassizii) at the Desert Tortoise Research Natural Area in the Mojave Desert. The following were higher inside than outside the natural area: (1) annual and perennial plant biomass, cover, diversity and dominance by natives, (2) soil seed...

Using motion-sensor camera technology to infer seasonal activity and thermal niche of the desert tortoise (Gopherus agassizii).

PubMed

Agha, Mickey; Augustine, Benjamin; Lovich, Jeffrey E; Delaney, David; Sinervo, Barry; Murphy, Mason O; Ennen, Joshua R; Briggs, Jessica R; Cooper, Robert; Price, Steven J

2015-01-01

Understanding the relationships between environmental variables and wildlife activity is an important part of effective management. The desert tortoise (Gopherus agassizii), an imperiled species of arid environments in the southwest US, may have increasingly restricted windows for activity due to current warming trends. In summer 2013, we deployed 48 motion sensor cameras at the entrances of tortoise burrows to investigate the effects of temperature, sex, and day of the year on the activity of desert tortoises. Using generalized estimating equations, we found that the relative probability of activity was associated with temperature (linear and quadratic), sex, and day of the year. Sex effects showed that male tortoises are generally more active than female tortoises. Temperature had a quadratic effect, indicating that tortoise activity was heightened at a range of temperatures. In addition, we found significant support for interactions between sex and day of the year, and sex and temperature as predictors of the probability of activity. Using our models, we were able to estimate air temperatures and times (days and hours) that were associated with maximum activity during the study. Because tortoise activity is constrained by environmental conditions such as temperature, it is increasingly vital to conduct studies on how tortoises vary their activity throughout the Sonoran Desert to better understand the effects of a changing climate. Copyright © 2015 Elsevier Ltd. All rights reserved.

Using motion-sensor camera technology to infer seasonal activity and thermal niche of the desert tortoise (Gopherus agassizii)

USGS Publications Warehouse

Agha, Mickey; Augustine, Benjamin; Lovich, Jeffrey E.; Delaney, David F.; Sinervo, Barry; Murphy, Mason O.; Ennen, Joshua R.; Briggs, Jessica R.; Cooper, Robert J.; Price, Steven J.

2015-01-01

Understanding the relationships between environmental variables and wildlife activity is an important part of effective management. The desert tortoise (Gopherus agassizii), an imperiled species of arid environments in the southwest US, may have increasingly restricted windows for activity due to current warming trends. In summer 2013, we deployed 48 motion sensor cameras at the entrances of tortoise burrows to investigate the effects of temperature, sex, and day of the year on the activity of desert tortoises. Using generalized estimating equations, we found that the relative probability of activity was associated with temperature (linear and quadratic), sex, and day of the year. Sex effects showed that male tortoises are generally more active than female tortoises. Temperature had a quadratic effect, indicating that tortoise activity was heightened at a range of temperatures. In addition, we found significant support for interactions between sex and day of the year, and sex and temperature as predictors of the probability of activity. Using our models, we were able to estimate air temperatures and times (days and hours) that were associated with maximum activity during the study. Because tortoise activity is constrained by environmental conditions such as temperature, it is increasingly vital to conduct studies on how tortoises vary their activity throughout the Sonoran Desert to better understand the effects of a changing climate.

COMPARISON OF CURRENT METHODS FOR THE DETECTION OF CHRONIC MYCOPLASMAL URTD IN WILD POPULATIONS OF THE MOJAVE DESERT TORTOISE (GOPHERUS AGASSIZII).

PubMed

Sandmeier, Franziska C; Weitzman, Chava L; Maloney, K Nichole; Tracy, C Richard; Nieto, Nathan; Teglas, Mike B; Hunter, Kenneth W; DuPré, Sally; Gienger, C M; Tuma, Michael W

2017-01-01

Pathogens that cause subclinical diseases or exhibit low infection intensities are difficult to quantify in wild populations. Mojave desert tortoises ( Gopherus agassizii ) have been the focus of much research aimed at measuring the presence of upper respiratory disease (URTD) and URTD-associated pathogens, and techniques used to quantify disease in Gopherus species have also been used for disease surveillance in other species of turtles and tortoises of conservation concern. Published surveys of G. agassizii populations have found a relatively low prevalence of URTD, with most URTD-positive animals exhibiting moderate, intermittent signs of morbidity. Therefore, multiple tests have been developed to quantify URTD including genetic detection of the pathogens Mycoplasma agassizii and Mycoplasma testudineum , detection of M. agassizii -specific antibodies, and standardized quantification of clinical signs of URTD and body condition. These diagnostic tests have only been compared in diseased or moribund, semicaptive animals. We compared diagnostic techniques (TaqMan® and SYBR™ Green qPCR, serology, and visible examination) to detect M. agassizii -associated URTD in 126 wild desert tortoises sampled in Nevada and California, US in 2010. All had healthy body condition indices and none exhibited more than mild-to-moderate visual signs of URTD. Pairwise comparisons of diagnostic techniques indicated poor performance in diagnosing disease in individual animals. We found stronger, but inconsistent, statistical associations among diagnostic techniques at the population level. Our findings have implications for quantifying subclinical respiratory disease in tortoises.

The effect of research activities and winter precipitation on voiding behaviour of Agassiz’s desert tortoises (Gopherus agassizii)

USGS Publications Warehouse

Agha, Mickey; Murphy, Mason O.; Lovich, Jeffrey E.; Ennen, Joshua R.; Oldham, Christian R.; Meyer-Wilkins, Kathie; Bjurlin, Curtis; Austin, Meaghan; Madrak, Sheila V.; Loughran, Caleb L.; Tennant, Laura A.; Price, Steven J.

2015-01-01

Implications: This study has demonstrated that common handling practices on desert tortoise may cause voiding behaviour. These results suggest that in order to minimise undesirable behavioural responses in studied desert tortoise populations, defined procedures or protocols must be followed by the investigators to reduce contact period to the extent feasible.

Application of diagnostic tests for mycoplasmal infections of desert and gopher tortoises with management recommendations

USGS Publications Warehouse

Brown, D.R.; Schumacher, Isabella M.; Mclaughlin, Grace S.; Wendland, L.D.; Brown, Mary E.; Klein, P.A.; Jacobson, E.R.

2002-01-01

Mycoplasmosis is a transmissible upper respiratory tract disease that has affected plans for management and conservation of wild desert and gopher tortoises in the United States. Although impact of mycoplasmosis on populations of desert and gopher tortoises is unknown, increased prevalence of seropositive animals as well as field observations of clinically ill tortoises have occurred in association with declining populations. In order to help in the identification of potentially infected animals, three tests have been developed to diagnose mycoplasmal infections of tortoises: 1) direct mycoplasmal culture; 2) detection of mycolplasmal chromosomal DNA by polymerase chain reaction (PCR); and 3) detection of anti-Mycoplasma antibodies in tortoise plasma by enzyme-linked immunosorbent assay (ELISA). Each test provides different, complementary information that collectively can be used to define tortoise mycoplasmal infection status. The types of samples required, the predictive value, interpretation, and cost vary among tests. These assays have been used for epidemiological surveys and in decision making for relocation, repatriation, or captive management of tortoises to minimize the risk of outbreaks of mycoplasmal respiratory disease and spread of the causative agent of this disease. Certain features of mycoplasmal infections of tortoises and other animals create a diagnostic dilemma. Multiple Mycoplasma species can cause respiratory disease with identical clinical presentations. Further, individual strains of a given species may vary with respect to their virulence potential, and some species may be commensals rather than pathogens. Current diagnostic tests may not differentiate among mycoplasmal species or strains or permit determination of pathogenicity of individual isolates. Thus, the information provided by testing is not a simple 'positive' vs. 'negative' issue. While these tests provide much needed information on the exposure of tortoise populations to Mycoplasma species, they do not provide a complete picture of the overall health status of individual tortoises or populations. Unfortunately, test results are often used to make life and death decisions concerning disposition of tortoises being displaced by land development without a complete understanding of the limitations of the diagnostic tests or any consideration of other infectious agents that might be present.

A highway's road-effect zone for desert tortoises (Gopherus agassizii)

USGS Publications Warehouse

Boarman, W.I.; Sazaki, M.

2006-01-01

Roads and highways can affect populations of animals directly (e.g. due to road mortality) and indirectly (e.g. due to fragmentation of habitat and proliferation of non-native or predatory species). We investigated the effect of roads on threatened desert tortoise (Gopherus agassizii) populations in the Mojave Desert, California, and attempted to determine the width of the road-effect zone by counting tortoise signs along transects at 0, 400, 800, and 1600 m from the edge of a highway. Mean sign count was 0.2/km at 0 m, 4.2/km at 400 m, 5.7/km at 800 m, and 5.4/km at 1600 m from the highway edge. The differences between all pairs of distances, except 800 and 1600 m, were statistically significant, suggesting that tortoise populations in our study area are depressed in a zone extending at least 400 m from roadways. We speculate that the major cause for this depression zone is road mortality.

Protection benefits desert tortoise (Gopherus agassizii) abundance: the influence of three management strategies on a threatened species

USGS Publications Warehouse

Berry, Kristin H.; Lyren, Lisa M.; Yee, Julie L.; Bailey, Tracy Y.

2014-01-01

We surveyed an area of ∼260 km2 in the western Mojave Desert to evaluate relationships between condition of Agassiz's Desert Tortoise populations (Gopherus agassizii) and habitat on lands that have experienced three different levels of management and protection. We established 240 1-ha plots using random sampling, with 80 plots on each of the three types of managed lands. We conducted surveys in spring 2011 and collected data on live tortoises, shell-skeletal remains, other signs of tortoises, perennial vegetation, predators, and evidence of human use. Throughout the study area and regardless of management area, tortoise abundance was positively associated with one of the more diverse associations of perennial vegetation. The management area with the longest history of protection, a fence, and legal exclusion of livestock and vehicles had significantly more live tortoises and lower death rates than the other two areas. Tortoise presence and abundance in this protected area had no significant positive or negative associations with predators or human-related impacts. In contrast, the management area with a more recent exclusion of livestock, limited vehicular traffic, and with a recent, partial fence had lower tortoise densities and high death rates. Tortoise abundance here was negatively associated with vehicle tracks and positively associated with mammalian predators and debris from firearms. The management area with the least protection—unfenced, with uncontrolled vehicle use, sheep grazing, and high trash counts—also had low tortoise densities and high death rates. Tortoise abundance was negatively associated with sheep grazing and positively associated with trash and mammalian predator scat.cat.

Multiple factors affect a population of Agassiz's desert tortoise (Gopherus agassizii) in the Northwestern Mojave Desert

USGS Publications Warehouse

Berry, Kristin H.; Yee, Julie L.; Coble, Ashley A.; Perry, William M.; Shields, Timothy A.

2013-01-01

Numerous factors have contributed to declines in populations of the federally threatened Agassiz's Desert Tortoise (Gopherus agassizii) and continue to limit recovery. In 2010, we surveyed a low-density population on a military test facility in the northwestern Mojave Desert of California, USA, to evaluate population status and identify potential factors contributing to distribution and low densities. Estimated densities of live tortoises ranged spatially from 1.2/km2 to 15.1/km2. Although only one death of a breeding-age tortoise was recorded for the 4-yr period prior to the survey, remains of 16 juvenile and immature tortoises were found, and most showed signs of predation by Common Ravens (Corvus corax) and mammals. Predation may have limited recruitment of young tortoises into the adult size classes. To evaluate the relative importance of different types of impacts to tortoises, we developed predictive models for spatially explicit densities of tortoise sign and live tortoises using topography (i.e., slope), predators (Common Raven, signs of mammalian predators), and anthropogenic impacts (distances from paved road and denuded areas, density of ordnance fragments) as covariates. Models suggest that densities of tortoise sign increased with slope and signs of mammalian predators and decreased with Common Ravens, while also varying based on interaction effects involving these predictors as well as distances from paved roads, denuded areas, and ordnance. Similarly, densities of live tortoises varied by interaction effects among distances to denuded areas and paved roads, density of ordnance fragments, and slope. Thus multiple factors predict the densities and distribution of this population.

Oxalosis in wild desert tortoises, Gopherus agassizii

USGS Publications Warehouse

Jacobson, Elliott R.; Berry, Kristin H.; Stacy, Brian; Huzella, Louis M.; Kalasinsky, Victor F.; Fleetwood, Michelle L.; Mense, Mark G.

2009-01-01

We necropsied a moribund, wild adult male desert tortoise (Gopherus agassizii) with clinical signs of respiratory disease and elevated plasma biochemical analytes indicative of renal disease (blood urea nitrogen [415 mg/dl], uric acid [11.8 mg/dl], sodium >180 mmol/l] and chloride [139 mmol/l]). Moderate numbers of birefringent oxalate crystals, based on infrared and electron microscopy, were present within renal tubules; small numbers were seen in colloid within thyroid follicles. A retrospective analysis of 66 additional cases of wild desert tortoises was conducted to determine whether similar crystals were present in thyroid and kidney. The tortoises, from the Mojave and Sonoran deserts, were necropsied between 1992 and 2003 and included juveniles and adults. Tortoises were classified as healthy (those that died due to trauma and where no disease was identified after necropsy and evaluation by standard laboratory tests used for other tortoises) or not healthy (having one or more diseases or lesions). For all 67 necropsied tortoises, small numbers of crystals of similar appearance were present in thyroid glands from 44 of 54 cases (81%) and in kidneys from three of 65 cases (5%). Presence of oxalates did not differ significantly between healthy and unhealthy tortoises, between age classes, or between desert region, and their presence was considered an incidental finding. Small numbers of oxalate crystals seen within the kidney of two additional tortoises also were considered an incidental finding. Although the source of the calcium oxalate could not be determined, desert tortoises are herbivores, and a plant origin seems most likely. Studies are needed to evaluate the oxalate content of plants consumed by desert tortoises, and particularly those in the area where the tortoise in renal failure was found.

Long-term post-fire effects on spatial ecology and reproductive output of female Agassiz’s desert tortoises (Gopherus agassizii) at a wind energy facility near Palm Springs, California, USA

USGS Publications Warehouse

Lovich, Jeffrey E.; Ennen, Joshua R.; Madrak, Sheila V.; Loughran, Caleb L.; Meyer, Katherin P.; Arundel, Terence R.; Bjurlin, Curtis D.

2011-01-01

We studied the long-term response of a cohort of eight female Agassiz’s desert tortoises (Gopherus agassizii) during the first 15 years following a large fire at a wind energy generation facility near Palm Springs, California, USA. The fire burned a significant portion of the study site in 1995. Tortoise activity areas were mapped using minimum convex polygons for a proximate post-fire interval from 1997 to 2000, and a long-term post-fire interval from 2009 to 2010. In addition, we measured the annual reproductive output of eggs each year and monitored the body condition of tortoises over time. One adult female tortoise was killed by the fire and five tortoises bore exposure scars that were not fatal. Despite predictions that tortoises would make the short-distance movements from burned to nearby unburned habitats, most activity areas and their centroids remained in burned areas for the duration of the study. The percentage of activity area burned did not differ significantly between the two monitoring periods. Annual reproductive output and measures of body condition remained statistically similar throughout the monitoring period. Despite changes in plant composition, conditions at this site appeared to be suitable for survival of tortoises following a major fire. High productivity at the site may have buffered tortoises from the adverse impacts of fire if they were not killed outright. Tortoise populations at less productive desert sites may not have adequate resources to sustain normal activity areas, reproductive output, and body conditions following fire.

Modeling Habitat of the Desert Tortoise (Gopherus agassizii) in the Mojave and Parts of the Sonoran Deserts of California, Nevada, Utah, and Arizona

USGS Publications Warehouse

Nussear, Kenneth E.; Esque, Todd C.; Inman, Richard D.; Gass, Leila; Thomas, Kathryn A.; Wallace, Cynthia S.A.; Blainey, Joan B.; Miller, David M.; Webb, Robert H.

2009-01-01

Habitat modeling is an important tool used to simulate the potential distribution of a species for a variety of basic and applied questions. The desert tortoise (Gopherus agassizii) is a federally listed threatened species in the Mojave Desert and parts of the Sonoran Desert of California, Nevada, Utah, and Arizona. Land managers in this region require reliable information about the potential distribution of desert tortoise habitat to plan conservation efforts, guide monitoring activities, monitor changes in the amount and quality of habitat available, minimize and mitigate disturbances, and ultimately to assess the status of the tortoise and its habitat toward recovery of the species. By applying information from the literature and our knowledge or assumptions of environmental variables that could potentially explain variability in the quality of desert tortoise habitat, we developed a quantitative habitat model for the desert tortoise using an extensive set of field-collected presence data. Sixteen environmental data layers were converted into a grid covering the study area and merged with the desert tortoise presence data that we gathered for input into the Maxent habitat-modeling algorithm. This model provides output of the statistical probability of habitat potential that can be used to map potential areas of desert tortoise habitat. This type of analysis, while robust in its predictions of habitat, does not account for anthropogenic changes that may have altered habitat with relatively high potential into areas with lower potential.

Seasonal shifts in shelter and microhabitat use of drymarchon couperi (eastern indigo snake) in Georgia

USGS Publications Warehouse

Hyslop, N.L.; Cooper, R.J.; Meyers, J.M.

2009-01-01

Drymarchon couperi (Eastern Indigo Snake), a threatened species of the southeastern Coastal Plain of the United States, has experienced population declines because of extensive habitat loss and degradation across its range. In Georgia and northern Florida, the species is associated with longleaf pine habitats that support Gopherus polyphemus (Gopher Tortoise) populations, the burrows of which D. couperi uses for shelter. The extent that D. couperi uses these burrows, in addition to the use of other underground shelters and the microhabitat features associated with these structures is largely unknown. From 2003 through 2004, we conducted a radiotelemetry study of D. couperi (n = 32) to examine use of shelters and microhabitat in Georgia. We used repeated measures regression on a candidate set of models created from a priori hypotheses using principal component scores, derived from analysis of microhabitat data to examine microhabitat use at underground shelters. Proportion of locations recorded underground did not differ seasonally or between sexes. In winter, we recorded >0.90 of underground locations at tortoise burrows. Use of these burrows was less pronounced in spring for males. Females used abandoned tortoise burrows more frequently than males year-round and used them on approximately 0.60 of their underground locations during spring. Microhabitat use at underground shelters was most influenced by season compared to sex, site, or body size. Females in spring and summer used more open microhabitat compared to males, potentially in response to gestation. Our results suggest that the availability of suitable underground shelters, especially G. polyphemus burrows, may be a limiting factor in the northern range of D. couperi, with important implications for its conservation. ?? 2009 by the American Society of Ichthyologists and Herpetologists.

Development and Application of a Physiological-based Framework for Assessing the Biological Significance of Military Activities on Threatened and Endangered Animal Species

DTIC Science & Technology

2009-03-17

scrub and slash pine flatwoods. J. Herpetology 25:317-321. Brode, E.E. 1959. Notes on the behavior of Gopherus polyphemus. Herpetologica 15:101-102...Gopherus polyphemus, in northeastern Florida. J. Herpetology 30:14-18. Dale, V.H., S.C. Beyeler, and B. Jackson. 2002. Understory vegetation...Interior, National Biological Survey. Diemer, J.E. 1992. Demography of the tortoise Gopherus polyphemus in Northern Florida. J. Herpetology 26:281-289

Livestock grazing and the desert tortoise in the Mojave Desert

USGS Publications Warehouse

Oldemeyer, John L.

1994-01-01

A large part of the Mojave Desert is not in pristine condition, and some current conditions can be related to past grazing-management practices. No information could be found on densities of the desert tortoise (Gopherus agassizii) or on vegetative conditions of areas that had not been grazed to allow managers a comparison of range conditions with data on tortoises. Experimental information to assess the effect of livestock grazing on tortoises is lacking, and researchers have not yet examined whether the forage that remains after grazing is sufficient to meet the nutritional needs of desert tortoises.

76 FR 45129 - Endangered and Threatened Wildlife and Plants; 12-Month Finding on a Petition To List the Gopher...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-27

... density of tortoises affects their social interactions and recent research has shown that when tortoise densities fall below 0.4 individuals per ha (0.2 per ac), social interactions decrease dramatically because...

The dazed and confused identity of Agassiz's land tortoise, Gopherus agassizii (Testudines, Testudinidae) with the description of a new species, and its consequences for conservation

USGS Publications Warehouse

Murphy, R.W.; Berry, K.H.; Edwards, T.; Leviton, A.E.; Lathrop, A.; Riedle, J.D.

2011-01-01

We investigate a cornucopia of problems associated with the identity of the desert tortoise, Gopherus agassizii (Cooper). The date of publication is found to be 1861, rather than 1863. Only one of the three original cotypes exists, and it is designated as the lectotype of the species. Another cotype is found to have been destroyed in the 1906 San Francisco earthquake and subsequent fire. The third is lost. The lectotype is genetically confirmed to be from California, and not Arizona, USA as sometimes reported. Maternally, the holotype of G. lepidocephalus (Ottley & Vel??zques Solis. 1989) from the Cape Region of Baja California Sur, Mexico is also from the Mojavian population of the desert tortoise, and not from Tiburon Island, Sonora, Mexico as previously proposed. A suite of characters serve to diagnose tortoises west and north of the Colorado River, the Mojavian population, from those east and south of the river in Arizona, USA, and Sonora and Sinaloa, Mexico, the Sonoran population. Species recognition is warranted and because G. lepidocephalus is from the Mojavian population, no names are available for the Sonoran species. Thus, a new species, Gopherus morafkai sp. n., is named and this action reduces the distribution of G. agassizii to only 30% of its former range. This reduction has important implications for the conservation and protection of G. agassizii, which may deserve a higher level of protection. ?? Robert W. Murphy et al.

The dazed and confused identity of Agassiz's land tortoise, Gopherus agassizii (Testudines, Testudinidae) with the description of a new species, and its consequences for conservation

USGS Publications Warehouse

Murphy, Robert K.; Berry, Kristin; Edwards, Taylor; Leviton, Alan E.; Lathrop, Amy; Riedle, J. Daren

2011-01-01

We investigate a cornucopia of problems associated with the identity of the desert tortoise, Gopherus agassizii Cooper. The date of publication is found to be 1861, rather than 1863. Only one of the three original cotypes exists, and it is designated as the lectotype of the species. Another cotype is found to have been destroyed in the 1906 San Francisco earthquake and subsequent fire. The third is lost. The lectotype is genetically confirmed to be from California, and not Arizona, USA as sometimes reported. Maternally, the holotype of G. lepidocephalus Ottley et Velázques Solis, 1989 from the Cape Region of Baja California Sur, Mexico is also from the Mojavian population of the desert tortoise, and not from Tiburon Island, Sonora, Mexico as previously proposed. A suite of characters serve to diagnose tortoises west and north of the Colorado River, the Mojavian population, from those east and south of the river in Arizona, USA and Sonora and Sinaloa, Mexico, the Sonoran population. Species recognition is warranted and because G. lepidocephalus is from the Mojavian population no names are available for the Sonoran species. Thus, a new species, Gopherus morafkai sp. n., is named and this action reduces the distribution of G. agassizii to only 30% of its former range. This reduction has important implications for the conservation and protection of G. agassizii, which may deserve a higher level of protection.

A quantitative PCR method for assessing the presence of Pasteurella testudinis DNA in nasal lavage samples from the desert tortoise (Gopherus agassizii).

PubMed

duPre', S A; Tracy, C R; Sandmeier, F C; Hunter, K W

2012-12-01

Pasteurella testudinis has been associated with upper respiratory tract disease (URTD) in the threatened desert tortoise (Gopherus agassizii). Our goal was to develop a sensitive and specific qPCR method for detecting DNA from P. testudinis in nasal lavage fluid collected from desert tortoises in the field. Probes for 16S ribosomal RNA and RNA polymerase β-subunit (rpoB) genes were designed. A standard curve generated with DNA extracted from known numbers of bacterial cells determined by flow cytometry revealed a lower detection limit of 50 fg/ml (10 bacteria/ml). The nasal lavage fluid contained no interfering substances, and the qPCR method did not recognize normal flora DNA. The nasal lavage samples from 20 desert tortoises captured in Clark County, Nevada, USA in 2007 and housed at the Desert Tortoise Conservation Center, were all positive for P. testudinis DNA by qPCR. Another set of 19 lavage samples collected in 2010 from wild desert tortoises in the Mojave Desert were tested and 84% were positive for P. testudinis DNA. Fully validated, this qPCR method will provide a means of determining colonization rate. When used in conjunction with serological methods and clinical evaluations, both infection rate and disease rate can be determined for this potential URTD pathogen. This new assay provides an important tool for managing the threatened populations of the Mojave Desert tortoise. Copyright © 2012 Elsevier B.V. All rights reserved.

Molecular methods to detect Mycoplasma spp. And Testudinid herpesvirus 2 in desert tortoises (Gopherus agassizii) and implications for disease management.

PubMed

Braun, Josephine; Schrenzel, Mark; Witte, Carmel; Gokool, Larisa; Burchell, Jennifer; Rideout, Bruce A

2014-10-01

Abstract Mycoplasmas are an important cause of upper respiratory tract disease (URTD) in desert tortoises (Gopherus agassizii) and have been a main focus in attempts to mitigate disease-based population declines. Infection risk can vary with an animal's population of origin, making screening tests popular tools for determining infection status in individuals and populations. To provide additional methods for investigating URTD we developed quantitative PCR (qPCR) assays specific for agents causing clinical signs of URTD: Mycoplasma agassizii, Mycoplasma testudineum, and Testudinid herpesvirus 2 (TeHV2) and tested necropsied desert tortoises housed at the Desert Tortoise Conservation Center in Las Vegas, Nevada, USA, as well as wild desert tortoises (n=3), during 2010. Findings were compared with M. agassizii enzyme-linked immunosorbent assay (ELISA) data. Based on qPCR, the prevalence of M. agassizii was 75% (33/44) and the prevalence of TeHV2 was 48% (20/42) in the evaluated population. Both agents were also present in the wild tortoises. Mycoplasma testudineum was not detected. The M. agassizii ELISA and qPCR results did not always agree. More tortoises were positive for M. agassizii by nasal mucosa testing than by nasal flush. Our findings suggest that mycoplasmas are not the only agents of concern and that a single M. agassizii ELISA or nasal flush qPCR alone failed to identify all potentially infected animals in a population. Caution should be exercised in using these tests for disposition decisions.

Biogeographic perspective of speciation among desert tortoises in the genus Gopherus: a preliminary evaluation

USGS Publications Warehouse

Edwards, Taylor; Vaughn, Mercy; Meléndez Torres, Cristina; Karl, Alice E.; Rosen, Philip C.; Berry, Kristin H.; Murph, Robert W.

2013-01-01

The enduring processes of time, climate, and adaptation have sculpted the distribution of organisms we observe in the Sonoran Desert. One such organism is Morafka’s desert tortoise, Gopherus morafkai. We apply a genomic approach to identify the evolutionary processes driving diversity in this species and present preliminary findings and emerging hypotheses. The Sonoran Desert form of the tortoise exhibits a continuum of genetic similarity spanning 850 km of Sonoran desertscrub extending from Empalme, Sonora, to Kingman, Arizona. However, at the ecotone between desertscrub and foothills thornscrub we identify a distinct, Sinaloan lineage and this occurrence suggests a more complex evolutionary history for G. morafkai. By using multiple loci from throughout the tortoise’s genome, we aim to determine if divergence between these lineages occurred in allopatry, and further to investigate for signatures of past or current genetic introgression. This international, collaborative project will assist state and federal agencies in developing management strategies that best preserve the evolutionary potential of Morafka’s desert tortoise. Ultimately, an understanding of the evolutionary history of desert tortoises will not only clarify the forces that have driven the divergence in this group, but also contribute to our knowledge of the biogeographic history of the Southwestern deserts and how diversity is maintained within them.

Gopherus agassizii (Agassiz’s desert tortoise). scute dysecdysis/scute sloughing

USGS Publications Warehouse

Nussear, Kenneth E.; Drake, Karla K.; Medica, Phil A.; Esque, Todd C.

2012-01-01

Desert tortoises with scute injuries due to fire or disease related processes can result in loss of the scute. These animals appear to function normally, and can replace the scute material with a keratinized layer that covers the bone. This paper describes a tortoise with severe scute loss from a wildfire in 2005, and an animal that lost its scute for unknown reasons. Both animals appeared to be healthy in all other aspects, and lived for many years afterward.

Gopherus agassizii (Desert Tortoise). Non-native seed dispersal

USGS Publications Warehouse

Ennen, J.R.; Loughran, Caleb L.; Lovich, Jeffrey E.

2011-01-01

Sahara Mustard (Brassica tournefortii) is a non-native, highly invasive weed species of southwestern U.S. deserts. Sahara Mustard is a hardy species, which flourishes under many conditions including drought and in both disturbed and undisturbed habitats (West and Nabhan 2002. In B. Tellman [ed.], Invasive Plants: Their Occurrence and Possible Impact on the Central Gulf Coast of Sonora and the Midriff Islands in the Sea of Cortes, pp. 91–111. University of Arizona Press, Tucson). Because of this species’ ability to thrive in these habitats, B. tournefortii has been able to propagate throughout the southwestern United States establishing itself in the Mojave and Sonoran Deserts in Arizona, California, Nevada, and Utah. Unfortunately, naturally disturbed areas created by native species, such as the Desert Tortoise (Gopherus agassizii), within these deserts could have facilitated the propagation of B. tournefortii. (Lovich 1998. In R. G. Westbrooks [ed.], Invasive Plants, Changing the Landscape of America: Fact Book, p. 77. Federal Interagency Committee for the Management of Noxious and Exotic Weeds [FICMNEW], Washington, DC). However, Desert Tortoises have never been directly observed dispersing Sahara Mustard seeds. Here we present observations of two Desert Tortoises dispersing Sahara Mustard seeds at the interface between the Mojave and Sonoran deserts in California.

Desert Tortoise (Gopherus agassizii) Dietary Specialization Decreases across a Precipitation Gradient

PubMed Central

Murray, Ian W.; Wolf, Blair O.

2013-01-01

We studied the plant resource use between and within populations of desert tortoise (Gopherus agassizii) across a precipitation gradient in the Sonoran Desert of Arizona. The carbon and nitrogen stable isotope values in animal tissues are a reflection of the carbon and nitrogen isotope values in diet, and consequently represent a powerful tool to study animal feeding ecology. We measured the δ13C and δ15N values in the growth rings on the shells of tortoises in different populations to characterize dietary specialization and track tortoise use of isotopically distinct C4/CAM versus C3 plant resources. Plants using C3 photosynthesis are generally more nutritious than C4 plants and these trait differences can have important growth and fitness consequences for consumers. We found that dietary specialization decreases in successively drier and less vegetated sites, and that broader population niche widths are accompanied by an increase in the dietary variability between individuals. Our results highlight how individual consumer plant resource use is bounded under a varying regime of precipitation and plant productivity, lending insight into how intra-individual dietary specialization varies over a spatial scale of environmental variability. PMID:23840495

Coupling gene-based and classic veterinary diagnostics improves interpretation of health and immune function in the Agassiz’s desert tortoise (Gopherus agassizii)

USGS Publications Warehouse

Drake, Karla K.; Bowen, Lizabeth; Lewison, Rebecca L.; Esque, Todd C.; Nussear, Kenneth E.; Braun, Josephine; Waters, Shannon C.; Miles, A. Keith

2017-01-01

The analysis of blood constituents is a widely used tool to aid in monitoring of animal health and disease. However, classic blood diagnostics (i.e. hematologic and plasma biochemical values) often do not provide sufficient information to determine the state of an animal’s health. Field studies on wild tortoises and other reptiles have had limited success in drawing significant inferences between blood diagnostics and physiological and immunological condition. However, recent research using gene transcription profiling in the threatened Mojave desert tortoise (Gopherus agassizii) has proved useful in identifying immune or physiologic responses and overall health. To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Clinically abnormal tortoises had increased transcription for four genes (SOD, MyD88, CL and Lep), increased lymphocyte production, biochemical enzymes and organics, trace elements of copper, and decreased numbers of leukocytes. We found significant positive correlations between increased transcription for SOD and increased trace elements for copper, as well as genes MyD88 and Lep with increased inflammation and microbial insults. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the development of more robust diagnostic measures for ill animals, or individuals directly impacted by disturbance.

Coupling gene-based and classic veterinary diagnostics improves interpretation of health and immune function in the Agassiz’s desert tortoise (Gopherus agassizii)

PubMed Central

Bowen, Lizabeth; Lewison, Rebecca L.; Esque, Todd C.; Nussear, Kenneth E.; Braun, Josephine; Waters, Shannon C.; Miles, A. Keith

2017-01-01

Abstract The analysis of blood constituents is a widely used tool to aid in monitoring of animal health and disease. However, classic blood diagnostics (i.e. hematologic and plasma biochemical values) often do not provide sufficient information to determine the state of an animal’s health. Field studies on wild tortoises and other reptiles have had limited success in drawing significant inferences between blood diagnostics and physiological and immunological condition. However, recent research using gene transcription profiling in the threatened Mojave desert tortoise (Gopherus agassizii) has proved useful in identifying immune or physiologic responses and overall health. To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Clinically abnormal tortoises had increased transcription for four genes (SOD, MyD88, CL and Lep), increased lymphocyte production, biochemical enzymes and organics, trace elements of copper, and decreased numbers of leukocytes. We found significant positive correlations between increased transcription for SOD and increased trace elements for copper, as well as genes MyD88 and Lep with increased inflammation and microbial insults. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the development of more robust diagnostic measures for ill animals, or individuals directly impacted by disturbance. PMID:28835840

Coupling gene-based and classic veterinary diagnostics improves interpretation of health and immune function in the Agassiz's desert tortoise (Gopherus agassizii).

PubMed

Drake, K Kristina; Bowen, Lizabeth; Lewison, Rebecca L; Esque, Todd C; Nussear, Kenneth E; Braun, Josephine; Waters, Shannon C; Miles, A Keith

2017-01-01

The analysis of blood constituents is a widely used tool to aid in monitoring of animal health and disease. However, classic blood diagnostics (i.e. hematologic and plasma biochemical values) often do not provide sufficient information to determine the state of an animal's health. Field studies on wild tortoises and other reptiles have had limited success in drawing significant inferences between blood diagnostics and physiological and immunological condition. However, recent research using gene transcription profiling in the threatened Mojave desert tortoise ( Gopherus agassizii ) has proved useful in identifying immune or physiologic responses and overall health. To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Clinically abnormal tortoises had increased transcription for four genes (SOD, MyD88, CL and Lep), increased lymphocyte production, biochemical enzymes and organics, trace elements of copper, and decreased numbers of leukocytes. We found significant positive correlations between increased transcription for SOD and increased trace elements for copper, as well as genes MyD88 and Lep with increased inflammation and microbial insults. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the development of more robust diagnostic measures for ill animals, or individuals directly impacted by disturbance.

Recent trends of desert tortoise populations in the Mojave Desert

USGS Publications Warehouse

Corn, Paul Stephen

1994-01-01

The desert tortoise, Gopherus agassizii (Cooper), was listed as threatened in the Mojave Desert in 1990. Important factors for the listing were severe recent mortality in tortoise populations and a general decline throughout this century. Recent trends in tortoise populations were examined by plotting total captures of adult and juvenile tortoises from 2.6-km2 study plots, rather than by mark-and-recapture population estimates. Changes in relative abundance of tortoises were greatest among large tortoises in the western Mojave Desert, which may reflect high levels of human disturbance, and among small tortoises, which may reflect either lower ability of searches to detect small tortoises or greater mortality of tortoises during drought conditions in 1986-90, or both factors. Further collection of data on population trends is needed, particularly in years with higher-than-average precipitation. Retention of the threatened status of the tortoise is a conservative strategy for the conservation of natural resources but should be reassessed when additional data are available.

Desert tortoise (Gopherus agassizii) survival at two eastern Mojave Desert sites: Death by short-term drought?

USGS Publications Warehouse

Longshore, Kathleen M.; Jaeger, Jef R.; Sappington, J. Mark

2003-01-01

Survival of adult Desert Tortoises (Gopherus agassizii) appears related to site-specific variation in precipitation and productivity of annual plants. We studied adult tortoise survival rates at two closely situated, but physiographically different, sites in the eastern Mojave Desert over a nine-year period (spring 1992 to spring 2001). Survival rates were initially derived from population surveys conducted over a three-year period and by radio-telemetry monitoring over a seven-year period beginning in 1994. After a period of initial stability, survival rates on the two sites diverged over the study period, and seven-year survival rates estimated from radio-telemetry monitoring were 0.900 and 0.269, respectively. A die-off in 1996 on the latter site appears to have been triggered by a period of drought, which began in the summer of 1995, coupled with a failure of annual vegetation production in 1996. Depressed survival rates on this site were associated with drought conditions during three of four years. Although the decline had the appearance of an epizootic, there were no clinical signs of disease. Relatively short-term drought, combined with little or no annual biomass, appears to have caused severe reductions in tortoise survival. If periods of drought-induced low survival are common over relatively small areas, then source-sink population dynamics may be an important factor determining tortoise population densities.

Factors affecting the thermal environment of Agassiz’s Desert Tortoise (Gopherus agassizii) cover sites in the Central Mojave Desert during periods of temperature extremes

USGS Publications Warehouse

Mack, Jeremy S.; Berry, Kristin H.; Miller, David; Carlson, Andrea S.

2015-01-01

Agassiz's Desert Tortoises (Gopherus agassizii) spend >95% of their lives underground in cover sites that serve as thermal buffers from temperatures, which can fluctuate >40°C on a daily and seasonal basis. We monitored temperatures at 30 active tortoise cover sites within the Soda Mountains, San Bernardino County, California, from February 2004 to September 2006. Cover sites varied in type and structural characteristics, including opening height and width, soil cover depth over the opening, aspect, tunnel length, and surficial geology. We focused our analyses on periods of extreme temperature: in summer, between July 1 and September 1, and winter, between November 1 and February 15. With the use of multivariate regression tree analyses, we found cover-site temperatures were influenced largely by tunnel length and subsequently opening width and soil cover. Linear regression models further showed that increasing tunnel length increased temperature stability and dampened seasonal temperature extremes. Climate change models predict increased warming for southwestern North America. Cover sites that buffer temperature extremes and fluctuations will become increasingly important for survival of tortoises. In planning future translocation projects and conservation efforts, decision makers should consider habitats with terrain and underlying substrate that sustain cover sites with long tunnels and expanded openings for tortoises living under temperature extremes similar to those described here or as projected in the future.

The Agassiz’s desert tortoise genome provides a resource for the conservation of a threatened species

PubMed Central

Tollis, Marc; DeNardo, Dale F.; Cornelius, John A.; Dolby, Greer A.; Edwards, Taylor; Henen, Brian T.; Karl, Alice E.; Murphy, Robert W.

2017-01-01

Agassiz’s desert tortoise (Gopherus agassizii) is a long-lived species native to the Mojave Desert and is listed as threatened under the US Endangered Species Act. To aid conservation efforts for preserving the genetic diversity of this species, we generated a whole genome reference sequence with an annotation based on deep transcriptome sequences of adult skeletal muscle, lung, brain, and blood. The draft genome assembly for G. agassizii has a scaffold N50 length of 252 kbp and a total length of 2.4 Gbp. Genome annotation reveals 20,172 protein-coding genes in the G. agassizii assembly, and that gene structure is more similar to chicken than other turtles. We provide a series of comparative analyses demonstrating (1) that turtles are among the slowest-evolving genome-enabled reptiles, (2) amino acid changes in genes controlling desert tortoise traits such as shell development, longevity and osmoregulation, and (3) fixed variants across the Gopherus species complex in genes related to desert adaptations, including circadian rhythm and innate immune response. This G. agassizii genome reference and annotation is the first such resource for any tortoise, and will serve as a foundation for future analysis of the genetic basis of adaptations to the desert environment, allow for investigation into genomic factors affecting tortoise health, disease and longevity, and serve as a valuable resource for additional studies in this species complex. PMID:28562605

The Agassiz's desert tortoise genome provides a resource for the conservation of a threatened species.

PubMed

Tollis, Marc; DeNardo, Dale F; Cornelius, John A; Dolby, Greer A; Edwards, Taylor; Henen, Brian T; Karl, Alice E; Murphy, Robert W; Kusumi, Kenro

2017-01-01

Agassiz's desert tortoise (Gopherus agassizii) is a long-lived species native to the Mojave Desert and is listed as threatened under the US Endangered Species Act. To aid conservation efforts for preserving the genetic diversity of this species, we generated a whole genome reference sequence with an annotation based on deep transcriptome sequences of adult skeletal muscle, lung, brain, and blood. The draft genome assembly for G. agassizii has a scaffold N50 length of 252 kbp and a total length of 2.4 Gbp. Genome annotation reveals 20,172 protein-coding genes in the G. agassizii assembly, and that gene structure is more similar to chicken than other turtles. We provide a series of comparative analyses demonstrating (1) that turtles are among the slowest-evolving genome-enabled reptiles, (2) amino acid changes in genes controlling desert tortoise traits such as shell development, longevity and osmoregulation, and (3) fixed variants across the Gopherus species complex in genes related to desert adaptations, including circadian rhythm and innate immune response. This G. agassizii genome reference and annotation is the first such resource for any tortoise, and will serve as a foundation for future analysis of the genetic basis of adaptations to the desert environment, allow for investigation into genomic factors affecting tortoise health, disease and longevity, and serve as a valuable resource for additional studies in this species complex.

Body size development of captive and free-ranging Leopard tortoises (Geochelone pardalis).

PubMed

Ritz, Julia; Hammer, Catrin; Clauss, Marcus

2010-01-01

The growth and weight development of Leopard tortoise hatchings (Geochelone pardalis) kept at the Al Wabra Wildlife Preservation (AWWP), Qatar, was observed for more than four years, and compared to data in literature for free-ranging animals on body weight or carapace measurements. The results document a distinctively faster growth in the captive animals. Indications for the same phenomenon in other tortoise species (Galapagos giant tortoises, G. nigra; Spur-thighed tortoises, Testudo graeca; Desert tortoises, Gopherus agassizi) were found in the literature. The cause of the high growth rate most likely is the constant provision with highly digestible food of low fiber content. Increased growth rates are suspected to have negative consequences such as obesity, high mortality, gastrointestinal illnesses, renal diseases, "pyramiding," fibrous osteodystrophy or metabolic bone disease. The apparently widespread occurrence of high growth rates in intensively managed tortoises underlines how easily ectothermic animals can be oversupplemented with nutrients. (c) 2009 Wiley-Liss, Inc.

76 FR 58441 - Endangered and Threatened Wildlife and Plants; Listing and Designation of Critical Habitat for...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-09-21

... the Mexican wolf (Canis lupus baileyi), Bolson tortoise (Gopherus flavomarginatus), Chiricahua leopard frog, black-tailed prairie dog (Cynomys ludovicianus), American bison (Bison bison), and Rio Grande...

The effects of isolation on the demography and genetic diversity of long-lived species: Implications for conservation and management of the gopher tortoise (Gopherus polyphemus)

USGS Publications Warehouse

Ennen, J.R.; Birkhead, R.D.; Kreiser, B.R.; Gaillard, D.L.; Qualls, C.P.; Lovich, J.E.

2011-01-01

In the southeastern United States, habitat loss has fragmented the landscape and isolated many populations of this region's flora and fauna, which has presumably resulted in smaller population sizes and reduced levels of genetic diversity. For example, forestry practices and anthropogenic disturbances are both cited as factors fragmenting the once extensive range of Gopherus polyphemus. One localized, but extreme, source of fragmentation was the impoundment of the Chattahoochee River in 1963 to form Walter F. George Reservoir along the border of Georgia and Alabama. The formation of this reservoir isolated populations of G. polyphemus on two newly created islands providing a natural laboratory to explore the demographics and genetic effects of fragmentation on a long-lived species. These populations were first surveyed in 1984 and, 21 years later, we revisited them to collect demographic data and tissue samples for genetic analysis. We genotyped all individuals for 10 microsatellite loci, and we tested these data for bottlenecks and compared them to levels of genetic diversity for populations from other portions of the range. We found 45 and two individuals on the larger and smaller islands, respectively. On the large island, however, the population size was identical to the 1984 survey. Only the population structure based on estimated age differed between the 1984 and 2004 surveys, while population size structure based on carapace length, sex ratio, and sex-specific growth rates did not differ. The population of the large island showed genetic evidence of a past bottleneck. The genetic diversity indices from the population of the large island, however, were comparable to or greater than those found at mainland sites, in particular from western populations.

Rugged Video System For Inspecting Animal Burrows

NASA Technical Reports Server (NTRS)

Triandafils, Dick; Maples, Art; Breininger, Dave

1992-01-01

Video system designed for examining interiors of burrows of gopher tortoises, 5 in. (13 cm) in diameter or greater, to depth of 18 ft. (about 5.5 m), includes video camera, video cassette recorder (VCR), television monitor, control unit, and power supply, all carried in backpack. Polyvinyl chloride (PVC) poles used to maneuver camera into (and out of) burrows, stiff enough to push camera into burrow, but flexible enough to bend around curves. Adult tortoises and other burrow inhabitants observable, young tortoises and such small animals as mice obscured by sand or debris.

Desert Tortoise (Gopherus agassizii)

USGS Publications Warehouse

Boarman, William I.; Boarman, William I.; Beaman, K.

2002-01-01

The desert tortoise is widely distributed throughout major portions of the Mojave and Sonoran deserts of California, Nevada, Utah, Arizona, Sonora, and Sinaloa. Genetic, morphological, ecological, and behavioral features suggest an evolutionary divergence between the tortoises found south and east of the Colorado River (“Sonoran population”), and those found north and west of the river (“Mojave population;” Lamb et al. 1989). The latter is the population Federally and State-listed as threatened. This population will be referred to in the remainder of this account. The majority of animals in the Mojave population occur at variable densities in six distinct population segments (i.e., evolutionarily significant units), each identified in the Recovery Plan for desert tortoises as separate Recovery Units (USFWS 1994).

Shaping species with ephemeral boundaries: The distribution and genetic structure of desert tortoise (Gopherus morafkai) in the Sonoran Desert region

USGS Publications Warehouse

Edwards, Taylor; Vaughn, Mercy; Rosen, Philip C.; Torres, Ma. Cristina Melendez; Karl, Alice E.; Culver, Melanie; Murphy, Robert W.

2015-01-01

The historically shifting ecotone between tropical deciduous forest and Sonoran desertscrub appears to be a boundary that fostered divergence between parapatric lineages of tortoises. The sharp genetic cline between the two lineages suggests that periods of isolation in temporary refugia due to Pleistocene climatic cycling influenced divergence. Despite incomplete reproductive isolation, the Sonoran and Sinaloan lineages of G. morafkai are on separate evolutionary trajectories.

Attributes of desert tortoise populations at the National Training Center, Central Mojave Desert, California, USA

USGS Publications Warehouse

Berry, K.H.; Bailey, T.Y.; Anderson, K.M.

2006-01-01

We sampled 21 study plots for desert tortoises (Gopherus agassizii) at the National Training Center, Fort Irwin, California. Each plot was sampled once between 1997 and 2003 to obtain a snapshot of population attributes, status, and relationships between tortoise densities and human activities. Densities ranged from <1 to 28 tortoises km-2; overall, tortoises were uncommon to rare at 16 of the 21 plots. Tortoise densities were negatively correlated with death rates, infectious disease (mycoplasmosis), surface disturbance and trash. Health status of tortoises was correlated with some anthropogenic uses. The presence of infectious disease in tortoises was negatively correlated with distances from offices, the Ft. Irwin cantonment, and paved roads. Also, significantly more tortoises with shell disease were found on plots with current and recent military use than on plots with no history of military use. Factors contributing to or causing deaths of tortoises included vehicles, vandalism, predation, mycoplasmosis and shell diseases. Annual death rates for subadult and adult tortoises ranged from 1.9% to 95.2% for the 4 years preceding surveys. Deaths from anthropogenic sources were significantly correlated with surface disturbances, trash, military ordnance, and proximity to offices and paved roads-typical characteristics of military training areas.

Evaluation of evidence supporting the effectiveness of desert tortoise recovery actions

USGS Publications Warehouse

Boarman, William I.; Kristan, William B.

2006-01-01

As a federally threatened species, the desert tortoise's (Gopherus agassizii) recovery is required under the Endangered Species Act (ESA). According to the criteria established by the Desert Tortoise Recovery Plan (U.S. Fish and Wildlife Service 1994) for delisting the tortoise from ESA protection, the species as a whole will be considered recovered when tortoises have exhibited a statistically significant upward trend for at least one tortoise generation (25 years), enough habitat is protected to allow persistence, provisions are in place to maintain discrete population growth rates at or above 1.0, regulatory measures are in place to ensure continued management of tortoise habitat, and there is no longer reason to believe that the species will require ESA protection in the future. Just as species extinction can be thought of as the cumulative extinction of all populations, species recovery can be thought of as recovery of constituent populations; management efforts for recovery generally are implemented and assessed at the population level. A recent review of the Desert Tortoise Recovery Plan, including an exhaustive literature search, has been compiled by the Desert Tortoise Recovery Plan Assessment Committee (Tracy et al. 2004).

Testing taxon tenacity of tortoises: evidence for a geographical selection gradient at a secondary contact zone

USGS Publications Warehouse

Edwards, Taylor; Berry, Kristin H.; Inman, Richard D.; Esque, Todd C.; Nussear, Kenneth E.; Jones, Cristina A.; Culver, Melanie

2015-01-01

We examined a secondary contact zone between two species of desert tortoise, Gopherus agassizii and G. morafkai. The taxa were isolated from a common ancestor during the formation of the Colorado River (4-8 mya) and are a classic example of allopatric speciation. However, an anomalous population of G. agassizii comes into secondary contact with G. morafkai east of the Colorado River in the Black Mountains of Arizona and provides an opportunity to examine reinforcement of species' boundaries under natural conditions. We sampled 234 tortoises representing G. agassizii in California (n = 103), G. morafkai in Arizona (n = 78), and 53 individuals of undetermined assignment in the contact zone including and surrounding the Black Mountains. We genotyped individuals for 25 STR loci and determined maternal lineage using mtDNA sequence data. We performed multilocus genetic clustering analyses and used multiple statistical methods to detect levels of hybridization. We tested hypotheses about habitat use between G. agassizii and G. morafkai in the region where they co-occur using habitat suitability models. Gopherus agassizii and G. morafkai maintain independent taxonomic identities likely due to ecological niche partitioning, and the maintenance of the hybrid zone is best described by a geographical selection gradient model.

Status of the desert tortoise in Red Rock Canyon State Park

USGS Publications Warehouse

Berry, Kristin H.; Keith, Kevin; Bailey, Tracy Y.

2008-01-01

We surveyed for desert tortoises, Gopherus agassizii, in the western part of Red Rock Canyon State Park and watershed in eastern Kern County, California, between 2002 and 2004. We used two techniques: a single demographic plot (~4 km2 ) and 37 landscape plots (1-ha each). We estimated population densities of tortoises to be between 2.7 and 3.57/km2 and the population in the Park to be 108 tortoises. We estimated the death rate at 67% for subadults and adults during the last 4 yrs. Mortality was high for several reasons: gunshot deaths, avian predation, mammalian predation, and probably disease. Historic and recent anthropogenic impacts from State Highway 14, secondary roads, trash, cross-country vehicle tracks, and livestock have contributed to elevated death rates and degradation of habitat. We propose conservation actions to reduce mortality.

Severe mortality of a population of threatened Agassiz’s desert tortoises: the American badger as a potential predator

USGS Publications Warehouse

Emblidge, Patrick G.; Nussear, Ken E.; Esque, Todd C.; Aiello, Christina M.; Walde, Andrew D.

2015-01-01

In the Mojave Desert of the southwestern United States, adult Agassiz’s desert tortoises Gopherus agassizii typically experience high survival, but population declines associated with anthropogenic impacts led to their listing as a threatened Species under the US Endangered Species Act in 1990. Predation of adult tortoises is not often considered a significant threat as they are adapted to deter most predation attempts. Despite these adaptations, some populations have experienced elevated mortality attributed to predators, suggesting that predation pressure may occasionally increase. During the tortoise activity seasons of 2012 and 2013, we observed unsustainably high mortality in 1 of 4 populations of adult desert tortoises (22 and 84%, respectively) in the western Mojave Desert in the vicinity of Barstow, CA. Photographic evidence from trail cameras and examination of carcass condition suggest that American badgers Taxidea taxus— a sometimes cited but unconfirmed predator of adult tortoises — may have been responsible for some of the mortality observed. We discuss the American badger as a plausible predator of a local tortoise population, but recommend further investigation into these events and the impacts such mortality can have on tortoise persistence.

Spatially-Explicit Assessments of Genetic Biodiversity and Dispersal in Gopher Tortoises for Evaluation of Habitat Fragmentation at DoD Sites

DTIC Science & Technology

2008-10-01

tortoise refuge on Camp Shelby). The markers showed that the no military activity sites they are closer to the high- impact sites than they are to...19 km south of Hattiesburg. The facility contains a 15 km2 “ impact area” used for artillery training activities. Activity within this area includes...However, these sites are more closely related to the impacted sites (based upon patterns of clustering) than that are to each other. This suggests

Gopherus agassizii (desert tortoise). Burrow collapse

USGS Publications Warehouse

Loughran, Caleb L.; Ennen, Joshua; Lovich, Jeffrey E.

2011-01-01

In the deserts of the southwestern U.S., burrows are utilized by the Desert Tortoise to escape environmental extremes (reviewed by Ernst and Lovich 2009. Turtles of the United States and Canada. 2nd ed. Johns Hopkins Univ. Press, Baltimore, Maryland. 827 pp.). However, the potential for mortality through burrow collapse and entrapment is poorly documented. Nicholson and Humphreys (1981. Proceedings of the Desert Tortoise Council, pp. 163−194) suggested that collapse due to livestock trampling may cause mortality. In addition, Lovich et al. (2011. Chelon. Cons. Biol. 10[1]:124–129) documented a Desert Tortoise that used a steel culvert as a burrow surrogate. The culvert filled completely with sediment following a significant rain event, entombing the animal and ultimately resulting in its death. We note that this mortality was associated with an anthropogenic structure; because tortoises are prodigious diggers, one might hypothesize that they have the ability to dig out of collapsed natural burrows in most situations. Circumstances described here presented us with an opportunity to test this hypothesis.

Mycoplasmosis and upper respiratory tract disease of tortoises: a review and update

USGS Publications Warehouse

Jacobson, Elliott R.; Brown, Mary B.; Wendland, Lori; Brown, Daniel R.; Klein, Paul A.; Christopher, Mary M.; Berry, Kristin H.

2014-01-01

Tortoise mycoplasmosis is one of the most extensively characterized infectious diseases of chelonians. A 1989 outbreak of upper respiratory tract disease (URTD) in free-ranging Agassiz's desert tortoises (Gopherus agassizii) brought together an investigative team of researchers, diagnosticians, pathologists, immunologists and clinicians from multiple institutions and agencies. Electron microscopic studies of affected tortoises revealed a microorganism in close association with the nasal mucosa that subsequently was identified as a new species, Mycoplasma agassizii. Over the next 24 years, a second causative agent, Mycoplasma testudineum, was discovered, the geographic distribution and host range of tortoise mycoplasmosis were expanded, diagnostic tests were developed and refined for antibody and pathogen detection, transmission studies confirmed the pathogenicity of the original M. agassizii isolate, clinical (and subclinical) disease and laboratory abnormalities were characterized, many extrinsic and predisposing factors were found to play a role in morbidity and mortality associated with mycoplasmal infection, and social behavior was implicated in disease transmission. The translation of scientific research into management decisions has sometimes led to undesirable outcomes, such as euthanasia of clinically healthy tortoises. In this article, we review and assess current research on tortoise mycoplasmosis, arguably the most important chronic infectious disease of wild and captive North American and European tortoises, and update the implications for management and conservation of tortoises in the wild.

Integrating Gene Transcription-Based Biomarkers to Understand Desert Tortoise and Ecosystem Health.

PubMed

Bowen, Lizabeth; Miles, A Keith; Drake, K Kristina; Waters, Shannon C; Esque, Todd C; Nussear, Kenneth E

2015-09-01

Tortoises are susceptible to a wide variety of environmental stressors, and the influence of human disturbances on health and survival of tortoises is difficult to detect. As an addition to current diagnostic methods for desert tortoises, we have developed the first leukocyte gene transcription biomarker panel for the desert tortoise (Gopherus agassizii), enhancing the ability to identify specific environmental conditions potentially linked to declining animal health. Blood leukocyte transcript profiles have the potential to identify physiologically stressed animals in lieu of clinical signs. For desert tortoises, the gene transcript profile included a combination of immune or detoxification response genes with the potential to be modified by biological or physical injury and consequently provide information on the type and magnitude of stressors present in the animal's habitat. Blood from 64 wild adult tortoises at three sites in Clark County, NV, and San Bernardino, CA, and from 19 captive tortoises in Clark County, NV, was collected and evaluated for genes indicative of physiological status. Statistical analysis using a priori groupings indicated significant differences among groups for several genes, while multidimensional scaling and cluster analyses of transcription C T values indicated strong differentiation of a large cluster and multiple outlying individual tortoises or small clusters in multidimensional space. These analyses highlight the effectiveness of the gene panel at detecting environmental perturbations as well as providing guidance in determining the health of the desert tortoise.

Integrating gene transcription-based biomarkers to understand desert tortoise and ecosystem health

USGS Publications Warehouse

Bowen, Lizabeth; Miles, A. Keith; Drake, Karla K.; Waters, Shannon C.; Esque, Todd C.; Nussear, Kenneth E.

2015-01-01

Tortoises are susceptible to a wide variety of environmental stressors, and the influence of human disturbances on health and survival of tortoises is difficult to detect. As an addition to current diagnostic methods for desert tortoises, we have developed the first leukocyte gene transcription biomarker panel for the desert tortoise (Gopherus agassizii), enhancing the ability to identify specific environmental conditions potentially linked to declining animal health. Blood leukocyte transcript profiles have the potential to identify physiologically stressed animals in lieu of clinical signs. For desert tortoises, the gene transcript profile included a combination of immune or detoxification response genes with the potential to be modified by biological or physical injury and consequently provide information on the type and magnitude of stressors present in the animal’s habitat. Blood from 64 wild adult tortoises at three sites in Clark County, NV, and San Bernardino, CA, and from 19 captive tortoises in Clark County, NV, was collected and evaluated for genes indicative of physiological status. Statistical analysis using a priori groupings indicated significant differences among groups for several genes, while multidimensional scaling and cluster analyses of transcriptionC T values indicated strong differentiation of a large cluster and multiple outlying individual tortoises or small clusters in multidimensional space. These analyses highlight the effectiveness of the gene panel at detecting environmental perturbations as well as providing guidance in determining the health of the desert tortoise.

Testing Taxon Tenacity of Tortoises: evidence for a geographical selection gradient at a secondary contact zone

PubMed Central

Edwards, Taylor; Berry, Kristin H; Inman, Richard D; Esque, Todd C; Nussear, Kenneth E; Jones, Cristina A; Culver, Melanie

2015-01-01

We examined a secondary contact zone between two species of desert tortoise, Gopherus agassizii and G. morafkai. The taxa were isolated from a common ancestor during the formation of the Colorado River (4–8 mya) and are a classic example of allopatric speciation. However, an anomalous population of G. agassizii comes into secondary contact with G. morafkai east of the Colorado River in the Black Mountains of Arizona and provides an opportunity to examine reinforcement of species' boundaries under natural conditions. We sampled 234 tortoises representing G. agassizii in California (n - 103), G. morafkai in Arizona (n - 78), and 53 individuals of undetermined assignment in the contact zone including and surrounding the Black Mountains. We genotyped individuals for 25 STR loci and determined maternal lineage using mtDNA sequence data. We performed multilocus genetic clustering analyses and used multiple statistical methods to detect levels of hybridization. We tested hypotheses about habitat use between G. agassizii and G. morafkai in the region where they co-occur using habitat suitability models. Gopherus agassizii and G. morafkai maintain independent taxonomic identities likely due to ecological niche partitioning, and the maintenance of the hybrid zone is best described by a geographical selection gradient model. PMID:26045959

Estimating Viability of Gopher Tortoise Populations

DTIC Science & Technology

2009-01-01

30 years of intensive data collection on Emy- doidea blandingii and Chelydra serpentina (Congdon et al. 1993, 1994). However, given that such...7:826–833. Congdon, J. D., A. E. Dunham, and R. C. van Loben Sels. 1994. Demographics of common snapping turtles (Chelydra serpentina ): Implications

Habitat selection by juvenile Mojave Desert tortoises

USGS Publications Warehouse

Todd, Brian D; Halstead, Brian J.; Chiquoine, Lindsay P.; Peaden, J. Mark; Buhlmann, Kurt A.; Tuberville, Tracey D.; Nafus, Melia G.

2016-01-01

Growing pressure to develop public lands for renewable energy production places several protected species at increased risk of habitat loss. One example is the Mojave desert tortoise (Gopherus agassizii), a species often at the center of conflicts over public land development. For this species and others on public lands, a better understanding of their habitat needs can help minimize negative impacts and facilitate protection or restoration of habitat. We used radio-telemetry to track 46 neonate and juvenile tortoises in the Eastern Mojave Desert, California, USA, to quantify habitat at tortoise locations and paired random points to assess habitat selection. Tortoise locations near burrows were more likely to be under canopy cover and had greater coverage of perennial plants (especially creosote [Larrea tridentata]), more coverage by washes, a greater number of small-mammal burrows, and fewer white bursage (Ambrosia dumosa) than random points. Active tortoise locations away from burrows were closer to washes and perennial plants than were random points. Our results can help planners locate juvenile tortoises and avoid impacts to habitat critical for this life stage. Additionally, our results provide targets for habitat protection and restoration and suggest that diverse and abundant small-mammal populations and the availability of creosote bush are vital for juvenile desert tortoises in the Eastern Mojave Desert.

Test Areas B-71 and B-82 Range Environmental Assessment, Revision 1

DTIC Science & Technology

2010-10-01

floridanus Blackberry Rubus cuneifolius Pocket Gopher Geomys pinetus Sand Pine Pinus Clausa White-tailed Deer Castor canadensis Pine-woods Bluestem...tortoise is found primarily within the Sandhills and open grassland ecological associations on the Eglin Range, where it excavates a tunnel -like

Airborne Lidar and Aerial Imagery to Assess Potential Habitats for the Desert Tortoise (Gopherus agassizii)

NASA Astrophysics Data System (ADS)

Young, Michael; Andrews, John; Caldwell, Todd; Saylam, Kutalmis

2017-04-01

The desert Southwestern United States serves as the host to the habitat for several threatened and endangered species, one of which is the desert tortoise (Gopherus agassizii). The goal in this study was to develop a fine-scale, remote sensing-based model that predicts potential habitat locations of G. agassizii in the Boulder City (Nevada) Conversation Easement area (35,500 hectares). This was done by analyzing airborne Lidar data (5-7 points/m2) and color imagery (4 bands, 0.15 m resolution) and determining percent vegetation cover, shrub height and area, NDVI, and several geomorphic characteristics including slope, azimuth, roughness, etc. Other field data used herein include estimates of canopy area and species richness using 1271 line transects, and shrub height and canopy area using plant-specific measurements of 200 plants. Larrea tridentada and Ambrosia dumosa shrubs were identified using an algorithm that obtained an optimum combination of NDVI and average reflectance of the four bands (IR, R, G, B) from pixels in each image. Results identified more than 65 million shrubs across the study area, and indicate that percent vegetation cover from the aerial imagery across the site (13.92%) compared favorably (14.52%) to the estimate obtained from the line transects, though the lidar method yielded shrub heights approximately 60% of measured shrub heights. Plants and landscape properties were combined with known locations of tortoise burrows (visually observed in 2014), yielding a predictive model of potential tortoise habitats. Masks were created using roughness coefficient, slope percent, azimuth of burrow openings, elevation and percent ground cover to isolate areas more likely to host habitats. Combined together, the masks isolated 55% of the total survey area, which would help target future field surveys. Overall, the vegetation map superimposed onto the background soil data could estimate the location of tortoise burrows.

Mojave desert tortoise (Gopherus agassizii) thermal ecology and reproductive success along a rainfall cline.

PubMed

Sieg, Annette E; Gambone, Megan M; Wallace, Bryan P; Clusella-Trullas, Susana; Spotila, James R; Avery, Harold W

2015-05-01

Desert resource environments (e.g. microclimates, food) are tied to limited, highly localized rainfall regimes which generate microgeographic variation in the life histories of inhabitants. Typically, enhanced growth rates, reproduction and survivorship are observed in response to increased resource availability in a variety of desert plants and short-lived animals. We examined the thermal ecology and reproduction of US federally threatened Mojave desert tortoises (Gopherus agassizii), long-lived and large-bodied ectotherms, at opposite ends of a 250-m elevation-related rainfall cline within Ivanpah Valley in the eastern Mojave Desert, California, USA. Biophysical operative environments in both the upper-elevation, "Cima," and the lower-elevation, "Pumphouse," plots corresponded with daily and seasonal patterns of incident solar radiation. Cima received 22% more rainfall and contained greater perennial vegetative cover, which conferred 5°C-cooler daytime shaded temperatures. In a monitored average rainfall year, Cima tortoises had longer potential activity periods by up to several hours and greater ephemeral forage. Enhanced resource availability in Cima was associated with larger-bodied females producing larger eggs, while still producing the same number of eggs as Pumphouse females. However, reproductive success was lower in Cima because 90% of eggs were depredated versus 11% in Pumphouse, indicating that predatory interactions produced counter-gradient variation in reproductive success across the rainfall cline. Land-use impacts on deserts (e.g. solar energy generation) are increasing rapidly, and conservation strategies designed to protect and recover threatened desert inhabitants, such as desert tortoises, should incorporate these strong ecosystem-level responses to regional resource variation in assessments of habitat for prospective development and mitigation efforts. © 2015 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and Wiley Publishing Asia Pty Ltd.

Desert tortoise hibernation: Temperatures, timing, and environment

USGS Publications Warehouse

Nussear, K.E.; Esque, T.C.; Haines, D.F.; Tracy, C.R.

2007-01-01

This research examined the onset, duration, and termination of hibernation in Desert Tortoises (Gopherus agassizii) over several years at multiple sites in the northeastern part of their geographic range, and recorded the temperatures experienced by tortoises during winter hibernation. The timing of hibernation by Desert Tortoises differed among sites and years. Environmental cues acting over the short-term did not appear to influence the timing of the hibernation period. Different individual tortoises entered hibernation over as many as 44 days in the fall and emerged from hibernation over as many as 49 days in the spring. This range of variation in the timing of hibernation indicates a weak influence at best of exogenous cues hypothesized to trigger and terminate hibernation. There do appear to be regional trends in hibernation behavior as hibernation tended to begin earlier and continue longer at sites that were higher in elevation and generally cooler. The emergence date was generally more similar among study sites than the date of onset. While the climate and the subsequent timing of hibernation differed among sites, the average temperatures experienced by tortoises while hibernating differed by only about five degrees from the coldest site to the warmest site. ?? 2007 by the American Society of Ichthyologists and Herpetologists.

Spatial pattern of risk of common raven predation on desert tortoises

USGS Publications Warehouse

Kristan, W. B.; Boarman, W.I.

2003-01-01

Common Ravens (Corvus corax) in the Mojave Desert of California, USA are subsidized by anthropogenic resources. Large numbers of nonbreeding ravens are attracted to human developments and thus are spatially restricted, whereas breeding ravens are distributed more evenly throughout the area. We investigated whether the spatial distribution of risk of predation by ravens to juveniles of the threatened desert tortoise (Gopherus agassizii) was determined by the spatial distribution of (1) nonbreeding ravens at human developments (leading to "spillover" predation) or (2) breeding individuals throughout developed and undeveloped areas (leading to " hyperpredation"). Predation risk, measured using styrofoam models of juvenile desert tortoises, was high near places attracting large numbers of nonbreeding ravens, near successful nests, and far from successful nests when large numbers of nonbreeding ravens were present. Patterns consistent with both "spillover" predation and "hyperpredation" were thus observed, attributed to the nonbreeding and breeding segments of the population, respectively. Furthermore, because locations of successful nests changed almost annually, consistent low-predation refugia for juvenile desert tortoises were nearly nonexistent. Consequently, anthropogenic resources for ravens could indirectly lead to the suppression, decline, or even extinction of desert tortoise populations.

Distance to human populations influences epidemiology of respiratory disease in desert tortoises

USGS Publications Warehouse

Berry, Kristin H.; Ashley A. Coble (formerly Emerson), no longer USGS; Yee, Julie L.; Mack, Jeremy S.; Perry, William M.; Anderson, Kemp M.; Brown, Mary B.

2014-01-01

We explored variables likely to affect health of Agassiz's desert tortoises (Gopherus agassizii) in a 1,183-km2 study area in the central Mojave Desert of California between 2005 and 2008. We evaluated 1,004 tortoises for prevalence and spatial distribution of 2 pathogens, Mycoplasma agassizii and M. testudineum, that cause upper respiratory tract disease. We defined tortoises as test-positive if they were positive by culture and/or DNA identification or positive or suspect for specific antibody for either of the two pathogens. We used covariates of habitat (vegetation, elevation, slope, and aspect), tortoise size and sex, distance from another test-positive tortoise, and anthropogenic variables (distances to roads, agricultural areas, playas, urban areas, and centroids of human-populated census blocks). We used both logistic regression models and regression trees to evaluate the 2 species of Mycoplasma separately. The prevalence of test-positive tortoises was low: 1.49% (15/1,004) for M. agassizii and 2.89% (29/1,004) for M. testudineum. The spatial distributions of test-positive tortoises for the 2 Mycoplasma species showed little overlap; only 2 tortoises were test-positive for both diseases. However, the spatial distributions did not differ statistically between the 2 species. We consistently found higher prevalence of test-positive tortoises with shorter distances to centroids of human-populated census blocks. The relationship between distance to human-populated census blocks and tortoises that are test-positive for M. agassizii and potentially M. testudineum may be related to release or escape of captive tortoises because the prevalence of M. agassizii in captive tortoises is high. Our findings have application to other species of chelonians where both domestic captive and wild populations exist. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

78 FR 10202 - Endangered and Threatened Wildlife and Plants; Receipt of an Application for an Incidental Take...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-02-13

...-FF04EF2000] Endangered and Threatened Wildlife and Plants; Receipt of an Application for an Incidental Take... acres of foraging, breeding, and sheltering habitat used by the Florida scrub-jay (Aphelocoma..., and gopher tortoise breeding, feeding, and sheltering habitat, incidental to land preparation and...

MX Siting Investigation. DTN/OBTS Field Surveys. Volume III. Biological Resources Nevada and Utah.

DTIC Science & Technology

1981-11-30

Black - throated sparrow (Amphispiza bilineata) X X X REPTILES Desert tortoise (Gopherus agassizi) X X Zebra-tailed...observed on the greatest number of sites was the black - throated sparrow (Amphispiza bilineata). The reptile most frequently observed was the side-blotched...Poliopt~ila caerula Loggerhead shrike Lanius ludovicianus Black - throated sparrow Amphispiza bilineata Unidentified sparrow Unidentified buteo REPTILES

Relocation of the 146th Tactical Airlift Wing of the California Air National Guard

DTIC Science & Technology

1985-02-01

Ephedra nevadensis C 0 A Nevada Morman Tea DICOTYLEDONES Asteraceae - Sunflower Family Acamptopappus sphaerocephalus 1 0 Goldenhead Ambrosia dumosa...blotched lizard (observed) Gopherus azassizi Desert tortoise Crotalus viridis Western rattlesnake Crotalus cerastes Sidewinder Tantilla planiceps Black...is Joshua Tree Woodland with Mormon Tea ( Ephedra sp.?), Cholla (Opuntia sp.?), Creosote-bush (Larrea Divaricata), Red Brome (Bromus rubens), Desert

Soluble scute proteins of healthy and ill desert tortoises (Gopherus agassizii)

USGS Publications Warehouse

Homer, B.L.; Li, C.; Berry, K.H.; Denslow, N.D.; Jacobson, E.R.; Sawyer, R.H.; Williams, J.E.

2001-01-01

Objectives - To characterize protein composition of shell scute of desert tortoises and to determine whether detectable differences could be used to identify healthy tortoises from tortoises with certain illnesses. Animals - 20 desert tortoises. Procedures - Complete postmortem examinations were performed on all tortoises. Plastron scute proteins were solubilized, scute proteins were separated by use of sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and proteins were analyzed, using densitometry. Two-dimensional immobilized pH gradient-PAGE (2D IPG-PAGE) and immunoblot analysis, using polyclonal antisera to chicken-feather ?? keratin and to alligator-scale ?? keratin, were conducted on representative samples. The 14-kd proteins were analyzed for amino acid composition. Results - The SDS-PAGE and densitometry revealed 7 distinct bands, each with a mean relative protein concentration of > 1 %, ranging from 8 to 47 kd, and a major protein component of approximately 14 kd that constituted up to 75% of the scute protein. The 2D IPG-PAGE revealed additional distinct 62-and 68-kd protein bands. On immunoblot analysis, the 14-, 32-, and 45-kd proteins reacted with both antisera. The 14-kd proteins had an amino acid composition similar to that of chicken ?? keratins. There was a substantial difference in the percentage of the major 14-kd proteins from scute of ill tortoises with normal appearing shells, compared with 14-kd proteins of healthy tortoises. Conclusions and Clinical Relevance - The major protein components of shell scute of desert tortoises have amino acid composition and antigenic features of ?? keratins. Scute protein composition may be altered in tortoises with certain systemic illnesses.

Impacts of upper respiratory tract disease on olfactory behavior of the Mojave desert tortoise

USGS Publications Warehouse

Germano, Jennifer; Van Zerr, Vanessa E.; Esque, Todd C.; Nussear, Ken E.; Lamberski, Nadine

2014-01-01

Upper respiratory tract disease (URTD) caused by Mycoplasma agassizii is considered a threat to desert tortoise populations that should be addressed as part of the recovery of the species. Clinical signs can be intermittent and include serous or mucoid nasal discharge and respiratory difficulty when nares are occluded. This nasal congestion may result in a loss of the olfactory sense. Turtles are known to use olfaction to identify food items, predators, and conspecifics; therefore, it is likely that URTD affects not only their physical well-being but also their behavior and ability to perform necessary functions in the wild. To determine more specifically the impact nasal discharge might have on free-ranging tortoises (Gopherus agassizii), we compared the responses of tortoises with and without nasal discharge and both positive and negative for M. agassizii antibodies to a visually hidden olfactory food stimulus and an empty control. We found that nasal discharge did reduce sense of smell and hence the ability to locate food. Our study also showed that moderate chronic nasal discharge in the absence of other clinical signs did not affect appetite in desert tortoises.

Desert tortoise use of burned habitat in the Eastern Mojave desert

USGS Publications Warehouse

Drake, Karla K.; Esque, Todd C.; Nussear, Kenneth E.; DeFalco, Lesley; Scoles, Sara; Modlin, Andrew T.; Medica, Philip A.

2015-01-01

Wildfires burned 24,254 ha of critical habitat designated for the recovery of the threatened Mojave desert tortoise (Gopherus agassizii) in southern Nevada during 2005. The proliferation of non-native annual grasses has increased wildfire frequency and extent in recent decades and continues to accelerate the conversion of tortoise habitat across the Mojave Desert. Immediate changes to vegetation are expected to reduce quality of critical habitat, yet whether tortoises will use burned and recovering habitat differently from intact unburned habitat is unknown. We compared movement patterns, home-range size, behavior, microhabitat use, reproduction, and survival for adult desert tortoises located in, and adjacent to, burned habitat to understand how tortoises respond to recovering burned habitat. Approximately 45% of home ranges in the post-fire environment contained burned habitat, and numerous observations (n = 12,223) corroborated tortoise use of both habitat types (52% unburned, 48% burned). Tortoises moved progressively deeper into burned habitat during the first 5 years following the fire, frequently foraging in burned habitats that had abundant annual plants, and returning to adjacent unburned habitat for cover provided by intact perennial vegetation. However, by years 6 and 7, the live cover of the short-lived herbaceous perennial desert globemallow (Sphaeralcea ambigua) that typically re-colonizes burned areas declined, resulting in a contraction of tortoise movements from the burned areas. Health and egg production were similar between burned and unburned areas indicating that tortoises were able to acquire necessary resources using both areas. This study documents that adult Mojave desert tortoises continue to use habitat burned once by wildfire. Thus, continued management of this burned habitat may contribute toward the recovery of the species in the face of many sources of habitat loss.

Effects of subsidized predators, resource variability, and human population density on desert tortoise populations in the Mojave Desert, USA

USGS Publications Warehouse

Esque, Todd C.; Nussear, Kenneth E.; Drake, K. Kristina; Walde, Andrew D.; Berry, Kristin H.; Averill-Murray, Roy C.; Woodman, A. Peter; Boarman, William I.; Medica, Phil A.; Mack, Jeremy S.; Heaton, Jill S.

2010-01-01

Understanding predator–prey relationships can be pivotal in the conservation of species. For 2 decades, desert tortoise Gopherus agassizii populations have declined, yet quantitative evidence regarding the causes of declines is scarce. In 2005, Ft. Irwin National Training Center, California, USA, implemented a translocation project including 2 yr of baseline monitoring of desert tortoises. Unusually high predation on tortoises was observed after translocation occurred. We conducted a retrospective analysis of predation and found that translocation did not affect the probability of predation: translocated, resident, and control tortoises all had similar levels of predation. However, predation rates were higher near human population concentrations, at lower elevation sites, and for smaller tortoises and females. Furthermore, high mortality rates were not limited to the National Training Center. In 2008, elevated mortality (as high as 43%) occurred throughout the listed range of the desert tortoise. Although no temporal prey base data are available for analysis from any of the study sites, we hypothesize that low population levels of typical coyote Canis latrans prey (i.e. jackrabbits Lepus californicus and other small animals) due to drought conditions influenced high predation rates in previous years. Predation may have been exacerbated in areas with high levels of subsidized predators. Many historical reports of increased predation, and our observation of a range-wide pattern, may indicate that high predation rates are more common than generally considered and may impact recovery of the desert tortoise throughout its range.

Genetic Assessments and Parentage Analysis of Captive Bolson Tortoises (Gopherus flavomarginatus) Inform Their “Rewilding” in New Mexico

PubMed Central

Edwards, Taylor; Cox, Elizabeth Canty; Buzzard, Vanessa; Wiese, Christiane; Hillard, L. Scott; Murphy, Robert W.

2014-01-01

The Bolson tortoise (Gopherus flavomarginatus) is the first species of extirpated megafauna to be repatriated into the United States. In September 2006, 30 individuals were translocated from Arizona to New Mexico with the long-term objective of restoring wild populations via captive propagation. We evaluated mtDNA sequences and allelic diversity among 11 microsatellite loci from the captive population and archived samples collected from wild individuals in Durango, Mexico (n = 28). Both populations exhibited very low genetic diversity and the captive population captured roughly 97.5% of the total wild diversity, making it a promising founder population. Genetic screening of other captive animals (n = 26) potentially suitable for reintroduction uncovered multiple hybrid G. flavomarginatus×G. polyphemus, which were ineligible for repatriation; only three of these individuals were verified as purebred G. flavomarginatus. We used these genetic data to inform mate pairing, reduce the potential for inbreeding and to monitor the maintenance of genetic diversity in the captive population. After six years of successful propagation, we analyzed the parentage of 241 hatchlings to assess the maintenance of genetic diversity. Not all adults contributed equally to successive generations. Most yearly cohorts of hatchlings failed to capture the diversity of the parental population. However, overlapping generations of tortoises helped to alleviate genetic loss because the entire six-year cohort of hatchlings contained the allelic diversity of the parental population. Polyandry and sperm storage occurred in the captives and future management strategies must consider such events. PMID:25029369

Spatially explicit decision support for selecting translocation areas for Mojave desert tortoises

USGS Publications Warehouse

Heaton, Jill S.; Nussear, Kenneth E.; Esque, Todd C.; Inman, Richard D.; Davenport, Frank; Leuteritz, Thomas E.; Medica, Philip A.; Strout, Nathan W.; Burgess, Paul A.; Benvenuti, Lisa

2008-01-01

Spatially explicit decision support systems are assuming an increasing role in natural resource and conservation management. In order for these systems to be successful, however, they must address real-world management problems with input from both the scientific and management communities. The National Training Center at Fort Irwin, California, has expanded its training area, encroaching U.S. Fish and Wildlife Service critical habitat set aside for the Mojave desert tortoise (Gopherus agassizii), a federally threatened species. Of all the mitigation measures proposed to offset expansion, the most challenging to implement was the selection of areas most feasible for tortoise translocation. We developed an objective, open, scientifically defensible spatially explicit decision support system to evaluate translocation potential within the Western Mojave Recovery Unit for tortoise populations under imminent threat from military expansion. Using up to a total of 10 biological, anthropogenic, and/or logistical criteria, seven alternative translocation scenarios were developed. The final translocation model was a consensus model between the seven scenarios. Within the final model, six potential translocation areas were identified.

Mammalian mesocarnivore visitation at tortoise burrows in a wind farm

USGS Publications Warehouse

Agha, Mickey; Smith, Amanda L.; Lovich, Jeffrey E.; Delaney, David F.; Ennen, Joshua R.; Briggs, Jessica R.; Fleckenstein, Leo J.; Tennant, Laura A.; Puffer, Shellie R.; Walde, Andrew D.; Arundel, Terry; Price, Steven J.; Todd, Brian D.

2017-01-01

There is little information on predator–prey interactions in wind energy landscapes in North America, especially among terrestrial vertebrates. Here, we evaluated how proximity to roads and wind turbines affect mesocarnivore visitation with desert tortoises (Gopherus agassizii) and their burrows in a wind energy landscape. In 2013, we placed motion-sensor cameras facing the entrances of 46 active desert tortoise burrows in a 5.2-km2 wind energy facility near Palm Springs, California, USA. Cameras recorded images of 35 species of reptiles, mammals, and birds. Counts for 4 species of mesocarnivores at desert tortoise burrows increased closer to dirt roads, and decreased closer to wind turbines. Our results suggest that anthropogenic infrastructure associated with wind energy facilities could influence the general behavior of mammalian predators and their prey. Further investigation of proximate mechanisms that underlie road and wind turbine effects (i.e., ground vibrations, sound emission, and traffic volume) and on wind energy facility spatial designs (i.e., road and wind turbine configuration) could prove useful for better understanding wildlife responses to wind energy development. © 2017 The Wildlife Society.

Does translocation influence physiological stress in the desert tortoise?

USGS Publications Warehouse

Drake, K.K.; Nussear, K.E.; Esque, T.C.; Barber, A.M.; Vittum, K.M.; Medica, P.A.; Tracy, C.R.; Hunter, K.W.

2012-01-01

Wildlife translocation is increasingly used to mitigate disturbances to animals or habitat due to human activities, yet little is known about the extent to which translocating animals causes stress. To understand the relationship between physiological stress and translocation, we conducted a multiyear study (2007–2009) using a population of desert tortoises (Gopherus agassizii) near Fort Irwin, California. Blood samples were collected from adult tortoises in three treatment groups (resident, translocated and control) for 1 year prior to and 2 years after translocation. Samples were analyzed by radioimmunoassay for plasma total corticosterone (CORT), a glucocorticoid hormone commonly associated with stress responses in reptiles. CORT values were analyzed in relation to potential covariates (animal sex, date, behavior, treatment, handling time, air temperature, home-range size, precipitation and annual plant production) among seasons and years. CORT values in males were higher than in females, and values for both varied monthly throughout the activity season and among years. Year and sex were strong predictors of CORT, and translocation explained little in terms of CORT. Based on these results, we conclude that translocation does not elicit a physiological stress response in desert tortoises.

Effects of wind energy production on growth, demography, and survivorship of a Desert Tortoise (Gopherus agassizii) population in Southern California with comparisons to natural populations

USGS Publications Warehouse

Lovich, J.E.; Ennen, J.R.; Madrak, S.; Meyer, K.; Loughran, C.; Bjurlin, C.; Arundel, T.; Turner, W.; Jones, C.; Groenendaal, G.M.

2011-01-01

We studied a Desert Tortoise (Gopherus agassizii) population at a large wind energy generation facility near Palm Springs, California over six field seasons from 1997 to 2010. We compared growth and demographic parameters to populations living in less disturbed areas; as well as populations of the closely-related and newly-described G. morafkai elsewhere in the Sonoran Desert of Arizona. We marked 69 individuals of all size classes and estimated a population size of 96 tortoises, or about 15.4/km2. Growth rates for males were lower than reported elsewhere, although maximum body size was larger. The smallest female with shelled eggs was 221 mm and males mature at over 200 mm. Mean male size was greater than that of females. The adult sex ratio was not significantly different from unity. Size frequency histograms were similar over time and when compared to most, but not all, G. morafkai populations in the Sonoran Desert. For a cohort of adult females, we estimated mortality at 8.4% annually due, in part, to site operations. This value was low in comparison to many other populations during the same time period. Other than possible differences in growth rate of males and the high survivorship of females, there appear to be few differences between this population and those in more natural areas. The high productivity of food plants at the site and its limited public access may contribute to the overall stability of the population. However, the effects of utility-scale renewable energy development on tortoises in other, less productive, areas are unknown. Additional research (especially controlled and replicated before and after studies) is urgently needed to address this deficiency because of forecasted expansion of utility-scale renewable energy development in the future.

Field trials of line transect methods applied to estimation of desert tortoise abundance

USGS Publications Warehouse

Anderson, David R.; Burnham, Kenneth P.; Lubow, Bruce C.; Thomas, L. E. N.; Corn, Paul Stephen; Medica, Philip A.; Marlow, R.W.

2001-01-01

We examine the degree to which field observers can meet the assumptions underlying line transect sampling to monitor populations of desert tortoises (Gopherus agassizii). We present the results of 2 field trials using artificial tortoise models in 3 size classes. The trials were conducted on 2 occasions on an area south of Las Vegas, Nevada, where the density of the test population was known. In the first trials, conducted largely by experienced biologists who had been involved in tortoise surveys for many years, the density of adult tortoise models was well estimated (-3.9% bias), while the bias was higher (-20%) for subadult tortoise models. The bias for combined data was -12.0%. The bias was largely attributed to the failure to detect all tortoise models on or near the transect centerline. The second trials were conducted with a group of largely inexperienced student volunteers and used somewhat different searching methods, and the results were similar to the first trials. Estimated combined density of subadult and adult tortoise models had a negative bias (-7.3%), again attributable to failure to detect some models on or near the centerline. Experience in desert tortoise biology, either comparing the first and second trials or in the second trial with 2 experienced biologists versus 16 novices, did not have an apparent effect on the quality of the data or the accuracy of the estimates. Observer training, specific to line transect sampling, and field testing are important components of a reliable survey. Line transect sampling represents a viable method for large-scale monitoring of populations of desert tortoise; however, field protocol must be improved to assure the key assumptions are met.

Comparison of effects of humans versus wildlife-detector dogs

USGS Publications Warehouse

Heaton, Jill S.; Cablk, Mary E.; Nussear, Kenneth E.; Esque, Todd C.; Medica, Philip A.; Sagebiel, John C.; Francis, S. Steve

2008-01-01

The use of dogs (Canis lupus familiaris) trained to locate wildlife under natural conditions may increase the risk of attracting potential predators or alter behavior of target species. These potentially negative effects become even more problematic when dealing with threatened or endangered species, such as the Mojave Desert tortoise (Gopherus agassizii). We addressed three concerns regarding use of dogs trained to locate desert tortoises in the wild. First, we looked at the potential for dogs to attract native and non-native predators to sites at a greater rate than with human visitation alone by comparing presence of predator sign before and after visitation by dogs and by humans. We found no significant difference in predator sign based upon type of surveyor. Second, we looked at the difference in risk of predation to desert tortoises that were located in the wild by humans versus humans with wildlife-detector dogs. Over a 5-week period, during which tortoises were extensively monitored and a subsequent period of 1 year during which tortoises were monitored monthly, there was no predation on, nor sign of predator-inflicted trauma to tortoises initially encountered either by humans or wildlife-detector dogs. Third, we looked at movement patterns of tortoises after encounter by either humans or wildlife-detector dogs. Movement of desert tortoises was not significantly different after being found by a human versus being found by a wildlife-detector dog. Based upon these initial results we conclude that use of trained wildlife-detector dogs to survey for desert tortoises in the wild does not appear to increase attraction of predators, increase risk of predation, or alter movement patterns of desert tortoises more than surveys conducted by humans alone.

Desert tortoises (Gopherus agassizii) are selective herbivores that track the flowering phenology of their preferred food plants

USGS Publications Warehouse

Jennings, Bryan W.; Berry, Kristin H.

2015-01-01

Previous studies of desert tortoise foraging ecology in the western Mojave Desert suggest that these animals are selective herbivores, which alter their diet according to the temporal availability of preferred food plants. These studies, however, did not estimate availability of potential food plants by taking into account the spatial and temporal variability in ephemeral plant abundance that occurs within the spring season. In this study, we observed 18 free-ranging adult tortoises take 35,388 bites during the spring foraging season. We also estimated the relative abundance of potential food plants by stratifying our sampling across different phenological periods of the 3-month long spring season and by different habitats and microhabitats. This methodology allowed us to conduct statistical tests comparing tortoise diet against plant abundance. Our results show that tortoises choose food plants non-randomly throughout the foraging season, a finding that corroborates the hypothesis that desert tortoises rely on key plants during different phenological periods of spring. Moreover, tortoises only consumed plants in a succulent state until the last few weeks of spring, at which time most annuals and herbaceous perennials had dried and most tortoises had ceased foraging. Many species of food plants—including several frequently eaten species—were not detected in our plant surveys, yet tortoises located these rare plants in their home ranges. Over 50% of bites consumed were in the group of undetected species. Interestingly, tortoises focused heavily on several leguminous species, which could be nutritious foods owing to their presumably high nitrogen contents. We suggest that herbaceous perennials, which were rare on our study area but represented ~30% of tortoise diet, may be important in sustaining tortoise populations during droughts when native annuals are absent. These findings highlight the vulnerability of desert tortoises to climate change if such changes alter the availability of their preferred food plants.

Desert tortoises (Gopherus agassizii) are selective herbivores that track the flowering phenology of their preferred food plants.

PubMed

Jennings, W Bryan; Berry, Kristin H

2015-01-01

Previous studies of desert tortoise foraging ecology in the western Mojave Desert suggest that these animals are selective herbivores, which alter their diet according to the temporal availability of preferred food plants. These studies, however, did not estimate availability of potential food plants by taking into account the spatial and temporal variability in ephemeral plant abundance that occurs within the spring season. In this study, we observed 18 free-ranging adult tortoises take 35,388 bites during the spring foraging season. We also estimated the relative abundance of potential food plants by stratifying our sampling across different phenological periods of the 3-month long spring season and by different habitats and microhabitats. This methodology allowed us to conduct statistical tests comparing tortoise diet against plant abundance. Our results show that tortoises choose food plants non-randomly throughout the foraging season, a finding that corroborates the hypothesis that desert tortoises rely on key plants during different phenological periods of spring. Moreover, tortoises only consumed plants in a succulent state until the last few weeks of spring, at which time most annuals and herbaceous perennials had dried and most tortoises had ceased foraging. Many species of food plants--including several frequently eaten species--were not detected in our plant surveys, yet tortoises located these rare plants in their home ranges. Over 50% of bites consumed were in the group of undetected species. Interestingly, tortoises focused heavily on several leguminous species, which could be nutritious foods owing to their presumably high nitrogen contents. We suggest that herbaceous perennials, which were rare on our study area but represented ~30% of tortoise diet, may be important in sustaining tortoise populations during droughts when native annuals are absent. These findings highlight the vulnerability of desert tortoises to climate change if such changes alter the availability of their preferred food plants.

Desert Tortoises (Gopherus agassizii) Are Selective Herbivores that Track the Flowering Phenology of Their Preferred Food Plants

PubMed Central

Jennings, W. Bryan; Berry, Kristin H.

2015-01-01

Previous studies of desert tortoise foraging ecology in the western Mojave Desert suggest that these animals are selective herbivores, which alter their diet according to the temporal availability of preferred food plants. These studies, however, did not estimate availability of potential food plants by taking into account the spatial and temporal variability in ephemeral plant abundance that occurs within the spring season. In this study, we observed 18 free-ranging adult tortoises take 35,388 bites during the spring foraging season. We also estimated the relative abundance of potential food plants by stratifying our sampling across different phenological periods of the 3-month long spring season and by different habitats and microhabitats. This methodology allowed us to conduct statistical tests comparing tortoise diet against plant abundance. Our results show that tortoises choose food plants non-randomly throughout the foraging season, a finding that corroborates the hypothesis that desert tortoises rely on key plants during different phenological periods of spring. Moreover, tortoises only consumed plants in a succulent state until the last few weeks of spring, at which time most annuals and herbaceous perennials had dried and most tortoises had ceased foraging. Many species of food plants—including several frequently eaten species—were not detected in our plant surveys, yet tortoises located these rare plants in their home ranges. Over 50% of bites consumed were in the group of undetected species. Interestingly, tortoises focused heavily on several leguminous species, which could be nutritious foods owing to their presumably high nitrogen contents. We suggest that herbaceous perennials, which were rare on our study area but represented ~30% of tortoise diet, may be important in sustaining tortoise populations during droughts when native annuals are absent. These findings highlight the vulnerability of desert tortoises to climate change if such changes alter the availability of their preferred food plants. PMID:25635840

Turbines and Terrestrial Vertebrates: Variation in Tortoise Survivorship Between a Wind Energy Facility and an Adjacent Undisturbed Wildland Area in the Desert Southwest (USA).

PubMed

Agha, Mickey; Lovich, Jeffrey E; Ennen, Joshua R; Augustine, Benjamin; Arundel, Terence R; Murphy, Mason O; Meyer-Wilkins, Kathie; Bjurlin, Curtis; Delaney, David; Briggs, Jessica; Austin, Meaghan; Madrak, Sheila V; Price, Steven J

2015-08-01

With the recent increase in utility-scale wind energy development, researchers have become increasingly concerned how this activity will affect wildlife and their habitat. To understand the potential impacts of wind energy facilities (WEF) post-construction (i.e., operation and maintenance) on wildlife, we compared differences in activity centers and survivorship of Agassiz's desert tortoises (Gopherus agassizii) inside or near a WEF to neighboring tortoises living near a wilderness area (NWA) and farther from the WEF. We found that the size of tortoise activity centers varied, but not significantly so, between the WEF (6.25 ± 2.13 ha) and adjacent NWA (4.13 ± 1.23 ha). However, apparent survival did differ significantly between the habitat types: over the 18-year study period apparent annual survival estimates were 0.96 ± 0.01 for WEF tortoises and 0.92 ± 0.02 for tortoises in the NWA. High annual survival suggests that operation and maintenance of the WEF has not caused considerable declines in the adult population over the past two decades. Low traffic volume, enhanced resource availability, and decreased predator populations may influence annual survivorship at this WEF. Further research on these proximate mechanisms and population recruitment would be useful for mitigating and managing post-development impacts of utility-scale wind energy on long-lived terrestrial vertebrates.

Turbines and terrestrial vertebrates: variation in tortoise survivorship between a wind energy facility and an adjacent undisturbed wildland area in the desert southwest (USA)

USGS Publications Warehouse

Agha, Mickey; Lovich, Jeffrey E.; Ennen, Joshua R.; Augustine, Benjamin J.; Arundel, Terry; Murphy, Mason O.; Meyer-Wilkins, Kathie; Bjurlin, Curtis; Delaney, David F.; Briggs, Jessica; Austin, Meaghan; Madrak, Sheila V.; Price, Steven J.

2015-01-01

With the recent increase in utility-scale wind energy development, researchers have become increasingly concerned how this activity will affect wildlife and their habitat. To understand the potential impacts of wind energy facilities (WEF) post-construction (i.e., operation and maintenance) on wildlife, we compared differences in activity centers and survivorship of Agassiz's desert tortoises (Gopherus agassizii) inside or near a WEF to neighboring tortoises living near a wilderness area (NWA) and farther from the WEF. We found that the size of tortoise activity centers varied, but not significantly so, between the WEF (6.25 ± 2.13 ha) and adjacent NWA (4.13 ± 1.23 ha). However, apparent survival did differ significantly between the habitat types: over the 18 year study period apparent annual survival estimates were 0.96 ± 0.01 for WEF tortoises and 0.92 ± 0.02 for tortoises in the NWA. High annual survival suggests that operation and maintenance of the WEF has not caused considerable declines in the adult population over the past two decades. Low traffic volume, enhanced resource availability and decreased predator populations may influence annual survivorship at this WEF. Further research on these proximate mechanisms and population recruitment would be useful for mitigating and managing post-development impacts of utility scale wind energy on long-lived terrestrial vertebrates.

Turbines and Terrestrial Vertebrates: Variation in Tortoise Survivorship Between a Wind Energy Facility and an Adjacent Undisturbed Wildland Area in the Desert Southwest (USA)

NASA Astrophysics Data System (ADS)

Agha, Mickey; Lovich, Jeffrey E.; Ennen, Joshua R.; Augustine, Benjamin; Arundel, Terence R.; Murphy, Mason O.; Meyer-Wilkins, Kathie; Bjurlin, Curtis; Delaney, David; Briggs, Jessica; Austin, Meaghan; Madrak, Sheila V.; Price, Steven J.

2015-08-01

With the recent increase in utility-scale wind energy development, researchers have become increasingly concerned how this activity will affect wildlife and their habitat. To understand the potential impacts of wind energy facilities (WEF) post-construction (i.e., operation and maintenance) on wildlife, we compared differences in activity centers and survivorship of Agassiz's desert tortoises ( Gopherus agassizii) inside or near a WEF to neighboring tortoises living near a wilderness area (NWA) and farther from the WEF. We found that the size of tortoise activity centers varied, but not significantly so, between the WEF (6.25 ± 2.13 ha) and adjacent NWA (4.13 ± 1.23 ha). However, apparent survival did differ significantly between the habitat types: over the 18-year study period apparent annual survival estimates were 0.96 ± 0.01 for WEF tortoises and 0.92 ± 0.02 for tortoises in the NWA. High annual survival suggests that operation and maintenance of the WEF has not caused considerable declines in the adult population over the past two decades. Low traffic volume, enhanced resource availability, and decreased predator populations may influence annual survivorship at this WEF. Further research on these proximate mechanisms and population recruitment would be useful for mitigating and managing post-development impacts of utility-scale wind energy on long-lived terrestrial vertebrates.

Nesting ecology of a population of Gopherus agassizii at a utility-scale wind energy facility in southern California

USGS Publications Warehouse

Ennen, Joshua R.; Lovich, Jeffrey E.; Meyer, Katherin P.; Bjurlin, Curtis; Arundel, Terence R.

2012-01-01

We investigated the annual nesting ecology of a population of Desert Tortoises (Gopherus agassizii) inhabiting a utility-scale renewable energy (USRE) facility in southern California and compared our results with populations inhabiting relatively undisturbed sites. In 2000, 15 radio-tracked females produced 29 clutches, and 24 nests were monitored to examine nest-site selection, nest predation, hatching success, date of emergence of hatchlings, and hatchling mass and carapace length. Overall, the nesting ecology of the population inhabiting the USRE facility was very similar to other populations of Desert Tortoises inhabiting relatively undisturbed habitats. Oviposition occurred from 12 May to 8 July, which was similar to other sites. Nest depths (11.1 cm), nest predation (12%), hatchling emergence date (7 August and 29 September), and hatchling morphometrics (i.e., MCL: 44.5 mm; mass: 23 g) were all within ranges reported in other populations. Unlike within other populations, we observed no relationship between hatchling size and either maternal body size or egg width. We found no evidence of females selecting for a particular burrow for oviposition of eggs based on environmental or anthropogenic variables. Most nests were located in or near burrows, and nest depth was greater for nests near the entrance than those deeper in the burrow. Although this study suggests that the nesting ecology of the Desert Tortoise population we studied was not adversely affected by the USRE facility, this relationship is only correlative because our study was not a before-after-control-impact (BACI) study, which would establish a cause and effect relationship. As pointed out in a recent review, BACI studies are critically needed to address the wildlife impacts of utility-scale renewable energy development.

Associating sex-biased and seasonal behaviour with contact patterns and transmission risk in Gopherus agassizii

USGS Publications Warehouse

Aiello, Christina M.; Esque, Todd; Nussear, K. E.; Emblidge, P. G.; Hudson, P. J.

2018-01-01

Interactions between wildlife hosts act as transmission routes for directly transmitted pathogens and vary in ways that affect transmission efficiency. Identifying drivers of contact variation can allow both contact inference and estimation of transmission dynamics despite limited data. In desert tortoises, mating strategy, burrow use and seasonal change influence numerous behaviours and likely shape contact patterns. In this study, we ask to what extent tortoise contact behaviour varies between sexes and seasons, and whether space or burrow-use data can be used to infer contact characteristics consistent with those recorded by proximity loggers. We identified sex and season-biased contact behaviour in both wild and captive populations indicative of female-female avoidance and seasonal male mate-seeking behaviour. Space and burrow-use patterns were informative, but did not always predict the extent of sex or seasonal biases on contact. We discuss the implications these findings have for transmission patterns and disease mitigation in tortoise populations.

Climatic variation and tortoise survival: has a desert species met its match?

USGS Publications Warehouse

Lovich, Jeffrey E.; Yackulic, Charles B.; Freilich, Jerry; Agha, Mickey; Austin, Meaghan; Meyer, Katherine P.; Arundel, Terence R.; Hansen, Jered; Vamstad, Michael S.; Root, Stephanie A.

2014-01-01

While demographic changes in short-lived species may be observed relatively quickly in response to climate changes, measuring population responses of long-lived species requires long-term studies that are not always available. We analyzed data from a population of threatened Agassiz’s desert tortoises (Gopherus agassizii) at a 2.59 km2 study plot in the Sonoran Desert ecosystem of Joshua Tree National Park, California, USA from 1978 to 2012 to examine variation in apparent survival and demography in this long-lived species. Transect-based, mark-recapture surveys were conducted in 10 of those years to locate living and dead tortoises. Previous modeling suggested that this area would become unsuitable as tortoise habitat under a warming and drying climate scenario. Estimated adult population size declined greatly from 1996 to 2012. The population appeared to have high apparent survival from 1978 to 1996 but apparent survival decreased from 1997 to 2002, concurrent with persistent drought. The best model relating apparent survivorship of tortoises ≥18 cm over time was based on a three year moving average of estimated winter precipitation. The postures and positions of a majority of dead tortoises found in 2012 were consistent with death by dehydration and starvation. Some live and many dead tortoises found in 2012 showed signs of predation or scavenging by mammalian carnivores. Coyote (Canis latrans) scats and other evidence from the site confirmed their role as tortoise predators and scavengers. Predation rates may be exacerbated by drought if carnivores switch from preferred mammalian prey to tortoises during dry years. Climate modeling suggests that the region will be subjected to even longer duration droughts in the future and that the plot may become unsuitable for continued tortoise survival. Our results showing wide fluctuations in apparent survival and decreasing tortoise density over time may be early signals of that possible outcome.

Are Wildlife Detector Dogs or People Better at Finding Desert Tortoises (Gopherus Agassizii)?

DTIC Science & Technology

2008-02-01

Herpetological Conservation and Biology 3(1):103-115. Submitted: 8 August 2007; Accepted: 14 January 2008 103 ARE WILDLIFE DETECTOR DOGS OR...ABSTRACT unclassified c. THIS PAGE unclassified Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std Z39-18 Herpetological Conservation and Biology 3...field trials at Ft. Irwin National Training Center northeast of Barstow, California, USA. Herpetological Conservation and Biology 3(1):103-115. 106

KENNEDY SPACE CENTER, FLA. - A blue-black indigo snake is seen crossing a roadway inside the Center. Indigo snakes are active during the day and spend a great deal of time foraging for food and mates. They often hide in gopher tortoise burrows (the tortoises don’t seem to mind) in sandy scrub habitats. The longest snakes in the United States, some individuals reach almost nine feet in length. In 1978, the U.S. Fish and Wildlife Service listed indigo snakes as a threatened species in all portions of its range; federal protection has helped to stop collection of these snakes from the wild. The numbers of indigo snakes are still declining throughout most of the Southeast, especially Georgia, Florida, Alabama, and Mississippi. Habitat loss and fragmentation is the main problem facing these snakes today. KSC shares a boundary with the Merritt Island National Wildlife Refuge, which encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles.

NASA Image and Video Library

2003-06-10

KENNEDY SPACE CENTER, FLA. - A blue-black indigo snake is seen crossing a roadway inside the Center. Indigo snakes are active during the day and spend a great deal of time foraging for food and mates. They often hide in gopher tortoise burrows (the tortoises don’t seem to mind) in sandy scrub habitats. The longest snakes in the United States, some individuals reach almost nine feet in length. In 1978, the U.S. Fish and Wildlife Service listed indigo snakes as a threatened species in all portions of its range; federal protection has helped to stop collection of these snakes from the wild. The numbers of indigo snakes are still declining throughout most of the Southeast, especially Georgia, Florida, Alabama, and Mississippi. Habitat loss and fragmentation is the main problem facing these snakes today. KSC shares a boundary with the Merritt Island National Wildlife Refuge, which encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles.

Discriminating patterns and drivers of multiscale movement in herpetofauna: The dynamic and changing environment of the Mojave desert tortoise.

PubMed

Sadoti, Giancarlo; Gray, Miranda E; Farnsworth, Matthew L; Dickson, Brett G

2017-09-01

Changes to animal movement in response to human-induced changes to the environment are of growing concern in conservation. Most research on this problem has focused on terrestrial endotherms, but changes to herpetofaunal movement are also of concern given their limited dispersal abilities and specialized thermophysiological requirements. Animals in the desert region of the southwestern United States are faced with environmental alterations driven by development (e.g., solar energy facilities) and climate change. Here, we study the movement ecology of a desert species of conservation concern, the Mojave desert tortoise ( Gopherus agassizii ). We collected weekly encounter locations of marked desert tortoises during the active (nonhibernation) seasons in 2013-2015, and used those data to discriminate movements among activity centers from those within them. We then modeled the probability of movement among activity centers using a suite of covariates describing characteristics of tortoises, natural and anthropogenic landscape features, vegetation, and weather. Multimodel inference indicated greatest support for a model that included individual tortoise characteristics, landscape features, and weather. After controlling for season, date, age, and sex, we found that desert tortoises were more likely to move among activity centers when they were further from minor roads and in the vicinity of barrier fencing; we also found that movement between activity centers was more common during periods of greater rainfall and during periods where cooler temperatures coincided with lower rainfall. Our findings indicate that landscape alterations and climate change both have the potential to impact movements by desert tortoises during the active season. This study provides an important baseline against which we can detect future changes in tortoise movement behavior.

Managing a subsidized predator population: Reducing common raven predation on desert tortoises

USGS Publications Warehouse

Boarman, W.I.

2003-01-01

Human communities often are an inadvertent source of food, water, and other resources to native species of wildlife. Because these resources are more stable and predictable than those in a natural environment, animals that subsist on them are able to increase in numbers and expand their range, much to the detriment of their competitors and species they prey upon. In the Mojave Desert, common ravens (Corvus corax) have benefited from human-provided resources to increase in population size precipitously in recent years. This trend has caused concern because ravens prey on juvenile desert tortoises (Gopherus agassizii), a federally threatened species. In this paper, I discuss management strategies to reduce raven predation on desert tortoises. The recommendations fall into three categories: (1) managing raven populations by reducing access to anthropogenic resources; (2) removing offending ravens or other birds in specially targeted tortoise management zones; and (3) continuing research on raven ecology, raven behavior, and methods of reducing raven predation on tortoises. I also recommend approaching the problem within an adaptive management framework: management efforts should first be employed as scientific experiments - with replicates and controls - to yield an unbiased assessment of their effectiveness. Furthermore, these strategies should be implemented in concert with actions that reduce other causes of desert tortoise mortality to aid the long-term recovery of their populations. Overall, the approaches outlined in this paper are widely applicable to the management of subsidized predators, particularly where they present a threat to a declining species of prey.

Clinical disease and laboratory abnormalities in free-ranging desert tortoises in California (1990-1995).

PubMed

Christopher, Mary M; Berry, Kristin H; Henen, Brian T; Nagy, Kenneth A

2003-01-01

Desert tortoise (Gopherus agassizii) populations have experienced precipitous declines resulting from the cumulative impact of habitat loss and human and disease-related mortality. Diagnosis of disease in live, free-ranging tortoises is facilitated by evaluation of clinical signs and laboratory test results but may be complicated by seasonal and environmental effects. The goals of this study were: 1) to describe and monitor clinical and laboratory signs of disease in adult, free-ranging desert tortoises at three sites in the Mojave Desert of California (USA) between October 1990 and October 1995; 2) to evaluate associations between clinical signs and hematologic, biochemical, serologic, and microbiologic test results; 3) to characterize disease patterns by site, season, and sex; and 4) to assess the utility of diagnostic tests in predicting morbidity and mortality. Venous blood samples were obtained four times per year from tortoises of both sexes at the Desert Tortoise Research Natural Area (DTNA), Goffs/Fenner Valley, and Ivanpah Valley. Tortoises were given a physical examination, and clinical abnormalities were graded by type and severity. Of 108 tortoises, 68.5% had clinical signs of upper respiratory tract disease consistent with mycoplasmosis at least once during the study period. In addition, 48.1% developed moderate to severe shell lesions consistent with cutaneous dyskeratosis. Ulcerated or plaque-like oral lesions were noted on single occasions in 23% of tortoises at Goffs and 6% of tortoises at Ivanpah. Tortoises with oral lesions were significantly more likely than tortoises without lesions to have positive nasal cultures for Mycoplasma agassizii (P = 0.001) and to be dehydrated (P = 0.0007). Nine tortoises had marked azotemia (blood urea nitrogen [BUN] > 100 mg/dl) or persistent azotemia (BUN 63-76 mg/dl); four of these died, three of which had necropsy confirmation of urinary tract disease. Laboratory tests had low sensitivity but high specificity in assessing morbidity and mortality; there was marked discrepancy between serologic and culture results for M. agassizii. Compared with tortoises at other sites, tortoises at DTNA were more likely to be seropositive for M. agassizii. Tortoises at Goffs were significantly more likely to have moderate to severe shell disease, oral lesions, positive nasal cultures for M. agassizii, and increased plasma aspartate aminotransferase activity. The severe disease prevalence in Goffs tortoises likely contributed to the population decline that occurred during and subsequent to this study.

Clinical disease and laboratory abnormalities in free-ranging desert tortoises in California (1990-1995)

USGS Publications Warehouse

Christopher, Mary M.; Berry, Kristin H.; Henen, Brian T.; Nagy, Kenneth A.

2003-01-01

Desert tortoise (Gopherus agassizii) populations have experienced precipitous declines resulting from the cumulative impact of habitat loss and human and disease-related mortality. Diagnosis of disease in live, free-ranging tortoises is facilitated by evaluation of clinical signs and laboratory test results but may be complicated by seasonal and environmental effects. The goals of this study were: 1) to describe and monitor clinical and laboratory signs of disease in adult, free-ranging desert tortoises at three sites in the Mojave Desert of California (USA) between October 1990 and October 1995; 2) to evaluate associations between clinical signs and hematologic, biochemical, serologic, and microbiologic test results; 3) to characterize disease patterns by site, season, and sex; and 4) to assess the utility of diagnostic tests in predicting morbidity and mortality. Venous blood samples were obtained four times per year from tortoises of both sexes at the Desert Tortoise Research Natural Area (DTNA), Goffs/Fenner Valley, and Ivanpah Valley. Tortoises were given a physical examination, and clinical abnormalities were graded by type and severity. Of 108 tortoises, 68.5% had clinical signs of upper respiratory tract disease consistent with mycoplasmosis at least once during the study period. In addition, 48.1% developed moderate to severe shell lesions consistent with cutaneous dyskeratosis. Ulcerated or plaque-like oral lesions were noted on single occasions in 23% of tortoises at Goffs and 6% of tortoises at Ivanpah. Tortoises with oral lesions were significantly more likely than tortoises without lesions to have positive nasal cultures for Mycoplasma agassizii(P=0.001) and to be dehydrated (P=0.0007). Nine tortoises had marked azotemia (blood urea nitrogen [BUN] >100 mg/dl) or persistent azotemia (BUN 63–76 mg/dl); four of these died, three of which had necropsy confirmation of urinary tract disease. Laboratory tests had low sensitivity but high specificity in assessing morbidity and mortality; there was marked discrepancy between serologic and culture results for M. agassizii. Compared with tortoises at other sites, tortoises at DTNA were more likely to be seropositive for M. agassizii. Tortoises at Goffs were significantly more likely to have moderate to severe shell disease, oral lesions, positive nasal cultures for M. agassizii, and increased plasma aspartate aminotransferase activity. The severe disease prevalence in Goffs tortoises likely contributed to the population decline that occurred during and subsequent to this study.

Short-Term Space-Use Patterns of Translocated Mojave Desert Tortoise in Southern California

PubMed Central

Farnsworth, Matthew L.; Dickson, Brett G.; Zachmann, Luke J.; Hegeman, Ericka E.; Cangelosi, Amanda R.; Jackson, Thomas G.; Scheib, Amanda F.

2015-01-01

Increasingly, renewable energy comprises a larger share of global energy production. Across the western United States, public lands are being developed to support renewable energy production. Where there are conflicts with threatened or endangered species, translocation can be used in an attempt to mitigate negative effects. For the threatened Mojave desert tortoise (Gopherus agassizii), we sought to compare habitat- and space-use patterns between short-distance translocated, resident, and control groups. We tested for differences in home range size based on utilization distributions and used linear mixed-effects models to compare space-use intensity, while controlling for demographic and environmental variables. In addition, we examined mean movement distances as well as home range overlap between years and for male and female tortoises in each study group. During the first active season post-translocation, home range size was greater and space-use intensity was lower for translocated tortoises than resident and control groups. These patterns were not present in the second season. In both years, there was no difference in home range size or space-use intensity between control and resident groups. Translocation typically resulted in one active season of questing followed by a second active season characterized by space-use patterns that were indistinguishable from control tortoises. Across both years, the number of times a tortoise was found in a burrow was positively related to greater space-use intensity. Minimizing the time required for translocated tortoises to exhibit patterns similar to non-translocated individuals may have strong implications for conservation by reducing exposure to adverse environmental conditions and predation. With ongoing development, our results can be used to guide future efforts aimed at understanding how translocation strategies influence patterns of animal space use. PMID:26352691

Short-Term Space-Use Patterns of Translocated Mojave Desert Tortoise in Southern California.

PubMed

Farnsworth, Matthew L; Dickson, Brett G; Zachmann, Luke J; Hegeman, Ericka E; Cangelosi, Amanda R; Jackson, Thomas G; Scheib, Amanda F

2015-01-01

Increasingly, renewable energy comprises a larger share of global energy production. Across the western United States, public lands are being developed to support renewable energy production. Where there are conflicts with threatened or endangered species, translocation can be used in an attempt to mitigate negative effects. For the threatened Mojave desert tortoise (Gopherus agassizii), we sought to compare habitat- and space-use patterns between short-distance translocated, resident, and control groups. We tested for differences in home range size based on utilization distributions and used linear mixed-effects models to compare space-use intensity, while controlling for demographic and environmental variables. In addition, we examined mean movement distances as well as home range overlap between years and for male and female tortoises in each study group. During the first active season post-translocation, home range size was greater and space-use intensity was lower for translocated tortoises than resident and control groups. These patterns were not present in the second season. In both years, there was no difference in home range size or space-use intensity between control and resident groups. Translocation typically resulted in one active season of questing followed by a second active season characterized by space-use patterns that were indistinguishable from control tortoises. Across both years, the number of times a tortoise was found in a burrow was positively related to greater space-use intensity. Minimizing the time required for translocated tortoises to exhibit patterns similar to non-translocated individuals may have strong implications for conservation by reducing exposure to adverse environmental conditions and predation. With ongoing development, our results can be used to guide future efforts aimed at understanding how translocation strategies influence patterns of animal space use.

Range-Wide Monitoring of the Mojave Desert Tortoise (Gopherus Agassizii): 2008 and 2009

DTIC Science & Technology

2012-09-01

so the updated proportions through December 2011 are reported here and used to estimate abundance in walkable areas of each stratum. Because...0-, 6-, or 12-km were actually walked, but of course all of the distances between these options might actually have been walkable . Transects that...given stratum covers 5000 km2, but only 90% was walkable and represented by our sampling design, then the density estimate applies to 4500 km2, and can

Host contact and shedding patterns clarify variation in pathogen exposure and transmission in threatened tortoise Gopherus agassizii: implications for disease modelling and management

USGS Publications Warehouse

Aiello, Christina M.; Nussear, Kenneth E.; Esque, Todd C.; Emblidge, Patrick G.; Sah, Pratha; Bansal, Shweta; Hudson, Peter J.

2016-01-01

Mean field models may misrepresent natural transmission patterns in this and other populations depending on the distribution of high-risk contact and shedding events. Rapid outbreaks in generally solitary species may result from changes to their naturally low-risk contact patterns or due to increases in the frequency of severe infections or super-shedding events – population characteristics that should be further investigated to develop effective management strategies.

A 30-year chronosequence of burned areas in Arizona: effects of wildfires on vegetation in Sonoran Desert Tortoise (Gopherus morafkai) habitats

USGS Publications Warehouse

Shryock, Daniel F.; Esque, Todd C.; Chen, Felicia C.

2015-01-01

Fire is widely regarded as a key evolutionary force in fire-prone ecosystems, with effects spanning multiple levels of organization, from species and functional group composition through landscape-scale vegetation structure, biomass, and diversity (Pausas and others, 2004; Bond and Keeley 2005; Pausas and Verdu, 2008). Ecosystems subjected to novel fire regimes may experience profound changes that are difficult to predict, including persistent losses of vegetation cover and diversity (McLaughlin and Bowers, 1982; Brown and Minnich, 1986; Brooks, 2012), losses to seed banks (Esque and others, 2010a), changes in demographic processes (Esque and others, 2004; DeFalco and others, 2010), increased erosion (Soulard and others, 2013), changes in nutrient availability (Esque and others, 2010b), increased dominance of invasive species (Esque and others, 2002; Brooks and others, 2004), and transitions to alternative community states (Davies and others, 2012). In the deserts of the Southwestern United States, fire size and frequency have increased substantially over the last several decades because of an invasive grass/fire feedback cycle (Schmid and Rogers, 1988; D’Antonio and Vitousek, 1992; Swantek and others, 1999; Brooks and Matchett, 2006; Esque and others, 2010a), in which invasive annual species are able to establish fuel loads capable of sustaining large-scale wildfires following years of high rainfall (Esque and Schwalbe, 2002). Native perennial vegetation is not well-adapted to fire in these environments, and widespread, physiognomically dominant species such as creosote bush (Larrea tridentata), Joshua tree (Yucca brevifolia), giant saguaro cactus (Carnegiea gigantea), and paloverde (Parkinsonia spp.) may be reduced or eliminated (Brown and Minnich, 1986; Esque and others, 2006; DeFalco and others, 2010), potentially affecting wildlife populations including the Sonoran and federally threatened Mojave Desert Tortoises (Gopherus morafkai and Gopherus agassizii, respectively; Brooks and Esque, 2002; Esque and others, 2003; Drake and others, in press).

Seroepidemiology of upper respiratory tract disease in the desert tortoise of California

USGS Publications Warehouse

Brown, Mary B.; Berry, Kristin H.; Schumacher, Isabella M.; Nagy, Kenneth A.; Christopher, Mary M.; Klein, Paul A.

1999-01-01

Several factors have combined with an upper respiratory tract disease (URTD) to produce declines on some population numbers of desert tortoises (Gopherus agassizii) in the western USA. This study was designed to determine the seroepidemiology of URTD in a population of wild adult tortoises at the Desert Tortoise Research Natural Area (DTNA) study site in Kern County (California, USA). Prior to initiation of the study, there was a dramatic decline in the number of individuals in this population. At each individual time point, samples were obtained from 12 to 20 tortoises with radiotransmitters during winter, spring, summer, and fall from 1992 through 1995. During the course of the study, 35 animals were sampled at one or more times. Only 10 animals were available for consistent monitoring throughout the 4 yr period. Specific antibody (Ab) levels to Mycoplasma agassizii were determined for individual tortoises by an enzyme-linked immunosorbent assay (ELISA) test. Specific Ab levels were not influenced by the gender of the tortoise. Levels of Ab and distribution of ELISA+, ELISA– and suspect animals were not consistently affected by season within a single year or for a season among the study years. Significantly more tortoises presented with clinical signs in 1992 and 1995. The profile of ELISA+ animals with clinical signs shifted from 5% (1992) to 42% (1995). In 1992, 52% of tortoises lacked clinical signs and were ELISA–. In 1995, this category accounted for only 19% of tortoises. Based on the results of this study, we conclude that URTD was present in this population as evidenced by the presence of ELISA+ individual animals, and that the infectious agent is still present as evidenced by seroconversion of previously ELISA– animals during the course of the study. There is evidence to suggest that animals may remain ELISA+ without showing overt disease, a clinical pattern consistent with the chronic nature of most mycoplasmal infections. Further, there are trends suggesting that the clinical expression of disease may be cyclical. Continued monitoring of this population could provide valuable information concerning the spread of URTD in wild tortoise populations.

Gopher Tortoise Survey Handbook

DTIC Science & Technology

2009-03-01

Florida. Journal of Herpetology 14:177–182. Anderson, D. R., K. P. Burnham, B. C. Lubow, L. Thomas, P. S. Corn, P. A. Medica, and R. W. Marlow. 2001...of Herpetology 39:65–72. Bausell, R. B., and Y.-F. Li. 2002. Power analysis for experimental research. New York: Cambridge University Press...slash pine flatwoods. Journal of Herpetology 25:317–321. Buckland, S. T., D. R. Anderson, K. P. Burnham, J. L. Laake, D. L. Borchers, and L. Thomas

Application of remote sensing to state and regional problems

NASA Technical Reports Server (NTRS)

Miller, W. F. (Principal Investigator); Tingle, J.; Wright, L. H.; Tebbs, B.

1984-01-01

Progress was made in the hydroclimatology, habitat modeling and inventory, computer analysis, wildlife management, and data comparison programs that utilize LANDSAT and SEASAT data provided to Mississippi researchers through the remote sensing applications program. Specific topics include water runoff in central Mississippi, habitat models for the endangered gopher tortoise, coyote, and turkey Geographic Information Systems (GIS) development, forest inventory along the Mississipppi River, and the merging of LANDSAT and SEASAT data for enhanced forest type discrimination.

Field Assessment of Gopher Tortoise Habitat at Camp Shelby, MS. Phase II: Overstory and Combined Assessments

DTIC Science & Technology

2010-10-17

conditions between active, recently active and randomly selected non-burrow locations at this site. Field surveys were completed in three study areas ...at the installation. On average, burrow sites had a much higher overall occurrence of longleaf pine and significantly lower total basal area as...East Area burrow and non-burrow locations, Camp Shelby, MS 2007 .................. 10 2 Mean basal area per acre for pine and hardwood on T-44, Mars

Guidelines for the field evaluation of desert tortoise health and disease

USGS Publications Warehouse

Berry, Kristin H.; Christopher, Mary M.

2001-01-01

Field evaluation of free-ranging wildlife requires the systematic documentation of a variety of environmental conditions and individual parameters of health and disease, particularly in the case of rare or endangered species. In addition, defined criteria are needed for the humane salvage of ill or dying animals. The purpose of this paper is to describe, in detail, the preparation, procedures, and protocols we developed and tested for the field evaluation of wild desert tortoises (Gopherus agassizii). These guidelines describe: preparations for the field, including developing familiarity with tortoise behavior and ecology, and preparation of standardized data sheets; journal notes to document background data on weather conditions, temperature, rainfall, locality, and historic and recent human activities; procedures to prevent the spread of disease and parasites; data sheets for live tortoises to record tortoise identification, location, sex, body measurements and activity; health profile forms for documenting and grading physical abnormalities of tortoise posture and movements, general condition (e.g., lethargy, cachexia), external parasites, and clinical abnormalities associated with shell and upper respiratory diseases; permanent photographic records for the retrospective analysis of progression and regression of upper respiratory and eye diseases, analysis of shell lesions and evaluation of growth and age; and indications and methods for salvaging ill or dying tortoises for necropsy evaluation. These guidelines, tested on 5,000 to 20,000 tortoises over a 10 to 27 yr period, were designed to maximize acquisition of data for demographic, ecological, health and disease research projects; to reduce handling and stress of individual animals; to avoid spread of infectious disease; to promote high quality and consistent data sets; and to reduce the duration and number of field trips. The field methods are adapted for desert tortoise life cycle, behavior, anatomy, physiology, and pertinent disease; however the model is applicable to other species of reptiles. Comprehensive databases of clinical signs of disease and health are crucial to research endeavors and essential to decisions on captive release, epidemiology of disease, translocation of wild tortoises, breeding programs, and euthanasia.

Fine-Scale Analysis Reveals Cryptic Landscape Genetic Structure in Desert Tortoises

PubMed Central

Latch, Emily K.; Boarman, William I.; Walde, Andrew; Fleischer, Robert C.

2011-01-01

Characterizing the effects of landscape features on genetic variation is essential for understanding how landscapes shape patterns of gene flow and spatial genetic structure of populations. Most landscape genetics studies have focused on patterns of gene flow at a regional scale. However, the genetic structure of populations at a local scale may be influenced by a unique suite of landscape variables that have little bearing on connectivity patterns observed at broader spatial scales. We investigated fine-scale spatial patterns of genetic variation and gene flow in relation to features of the landscape in desert tortoise (Gopherus agassizii), using 859 tortoises genotyped at 16 microsatellite loci with associated data on geographic location, sex, elevation, slope, and soil type, and spatial relationship to putative barriers (power lines, roads). We used spatially explicit and non-explicit Bayesian clustering algorithms to partition the sample into discrete clusters, and characterize the relationships between genetic distance and ecological variables to identify factors with the greatest influence on gene flow at a local scale. Desert tortoises exhibit weak genetic structure at a local scale, and we identified two subpopulations across the study area. Although genetic differentiation between the subpopulations was low, our landscape genetic analysis identified both natural (slope) and anthropogenic (roads) landscape variables that have significantly influenced gene flow within this local population. We show that desert tortoise movements at a local scale are influenced by features of the landscape, and that these features are different than those that influence gene flow at larger scales. Our findings are important for desert tortoise conservation and management, particularly in light of recent translocation efforts in the region. More generally, our results indicate that recent landscape changes can affect gene flow at a local scale and that their effects can be detected almost immediately. PMID:22132143

Fine-scale analysis reveals cryptic landscape genetic structure in desert tortoises.

PubMed

Latch, Emily K; Boarman, William I; Walde, Andrew; Fleischer, Robert C

2011-01-01

Characterizing the effects of landscape features on genetic variation is essential for understanding how landscapes shape patterns of gene flow and spatial genetic structure of populations. Most landscape genetics studies have focused on patterns of gene flow at a regional scale. However, the genetic structure of populations at a local scale may be influenced by a unique suite of landscape variables that have little bearing on connectivity patterns observed at broader spatial scales. We investigated fine-scale spatial patterns of genetic variation and gene flow in relation to features of the landscape in desert tortoise (Gopherus agassizii), using 859 tortoises genotyped at 16 microsatellite loci with associated data on geographic location, sex, elevation, slope, and soil type, and spatial relationship to putative barriers (power lines, roads). We used spatially explicit and non-explicit Bayesian clustering algorithms to partition the sample into discrete clusters, and characterize the relationships between genetic distance and ecological variables to identify factors with the greatest influence on gene flow at a local scale. Desert tortoises exhibit weak genetic structure at a local scale, and we identified two subpopulations across the study area. Although genetic differentiation between the subpopulations was low, our landscape genetic analysis identified both natural (slope) and anthropogenic (roads) landscape variables that have significantly influenced gene flow within this local population. We show that desert tortoise movements at a local scale are influenced by features of the landscape, and that these features are different than those that influence gene flow at larger scales. Our findings are important for desert tortoise conservation and management, particularly in light of recent translocation efforts in the region. More generally, our results indicate that recent landscape changes can affect gene flow at a local scale and that their effects can be detected almost immediately.

Environmental Assessment for the Replacement of the JP-8 Transfer Pipeline between the 6000 Area and 400 Area at Tyndall Air Force Base Bay County, Florida

DTIC Science & Technology

2012-09-01

AFB are essentially the same as those published by the Federal Interagency Committee on Urban Noise in the June 1980 publication, Guidelines for...Florida 32765 407.409.5256 stephen.rice@arcadis-us.com Professional Wetland Scientist (SWS # 1980 ) Florida Authorized Gopher Tortoise Agent (GTA...University of Florida Figure 13. Eastern Indigo Snake showing maroon chin coloration. Credits: Natalie Hyslop , University of Georgia, Feb 2005

Negative impacts of invasive plants on conservation of sensitive desert wildlife

USGS Publications Warehouse

Drake, K. Kristina; Bowen, Lizabeth; Nussear, Kenneth E.; Esque, Todd C.; Berger, Andrew J.; Custer, Nathan; Waters, Shannon C.; Johnson, Jay D.; Miles, A. Keith; Lewison, Rebecca L.

2016-01-01

Habitat disturbance from development, resource extraction, off-road vehicle use, and energy development ranks highly among threats to desert systems worldwide. In the Mojave Desert, United States, these disturbances have promoted the establishment of nonnative plants, so that native grasses and forbs are now intermixed with, or have been replaced by invasive, nonnative Mediterranean grasses. This shift in plant composition has altered food availability for Mojave Desert tortoises (Gopherus agassizii), a federally listed species. We hypothesized that this change in forage would negatively influence the physiological ecology, immune competence, and health of neonatal and yearling tortoises. To test this, we monitored the effects of diet on growth, body condition, immunological responses (measured by gene transcription), and survival for 100 captive Mojave tortoises. Tortoises were assigned to one of five diets: native forbs, native grass, invasive grass, and native forbs combined with either the native or invasive grass. Tortoises eating native forbs had better body condition and immune functions, grew more, and had higher survival rates (>95%) than tortoises consuming any other diet. At the end of the experiment, 32% of individuals fed only native grass and 37% fed only invasive grass were found dead or removed from the experiment due to poor body conditions. In contrast, all tortoises fed either the native forb or combined native forb and native grass diets survived and were in good condition. Health and body condition quickly declined for tortoises fed only the native grass (Festuca octoflora) or invasive grass (Bromus rubens) with notable loss of fat and muscle mass and increased muscular atrophy. Bromus rubens seeds were found embedded in the oral mucosa and tongue in most individuals eating that diet, which led to mucosal inflammation. Genes indicative of physiological, immune, and metabolic functions were transcribed at lower levels for individuals fed B. rubens, indicating potential greater susceptibility to disease or other health-related problems. This study highlights the negative indirect effects of invasive grasses, such as red brome, in desert ecosystems, and provides definitive evidence of a larger negative consequence to health, survival, and ultimately population recruitment for Mojave Desert tortoises than previously understood.

Reference intervals and physiologic alterations in hematologic and biochemical values of free-ranging desert tortoises in the Mojave Desert

USGS Publications Warehouse

Christopher, Mary M.; Berry, Kristin H.; Wallis, I.R.; Nagy, K.A.; Henen, B.T.; Peterson, C.C.

1999-01-01

Desert tortoise (Gopherus agassizii) populations have experienced precipitous declines resulting from the cumulative impact of habitat loss, and human and disease-related mortality. Evaluation of hematologic and biochemical responses of desert tortoises to physiologic and environmental factors can facilitate the assessment of stress and disease in tortoises and contribute to management decisions and population recovery. The goal of this study was to obtain and analyze clinical laboratory data from free-ranging desert tortoises at three sites in the Mojave Desert (California, USA) between October 1990 and October 1995, to establish reference intervals, and to develop guidelines for the interpretation of laboratory data under a variety of environmental and physiologic conditions. Body weight, carapace length, and venous blood samples for a complete blood count and clinical chemistry profile were obtained from 98 clinically healthy adult desert tortoises of both sexes at the Desert Tortoise Research Natural area (western Mojave), Goffs (eastern Mojave) and Ivanpah Valley (northeastern Mojave). Samples were obtained four times per year, in winter (February/March), spring (May/June), summer (July/August), and fall (October). Years of near-, above- and below-average rainfall were represented in the 5 yr period. Minimum, maximum and median values, and central 95 percentiles were used as reference intervals and measures of central tendency for tortoises at each site and/or season. Data were analyzed using repeated measures analysis of variance for significant (P < 0.01) variation on the basis of sex, site, season, and interactions between these variables. Significant sex differences were observed for packed cell volume, hemoglobin concentration, aspartate transaminase activity, and cholesterol, triglyceride, calcium, and phosphorus concentrations. Marked seasonal variation was observed in most parameters in conjunction with reproductive cycle, hibernation, or seasonal rainfall. Year-to-year differences and long-term alterations primarily reflected winter rainfall amounts. Site differences were minimal, and largely reflected geographic differences in precipitation patterns, such that results from these studies can be applied to other tortoise populations in environments with known rainfall and forage availability patterns.

Enhancing and restoring habitat for the desert tortoise

USGS Publications Warehouse

Abella, Scott R.; Berry, Kristin H.

2016-01-01

Habitat has changed unfavorably during the past 150 y for the desert tortoise Gopherus agassizii, a federally threatened species with declining populations in the Mojave Desert and western Sonoran Desert. To support recovery efforts, we synthesized published information on relationships of desert tortoises with three habitat features (cover sites, forage, and soil) and candidate management practices for improving these features for tortoises. In addition to their role in soil health and facilitating recruitment of annual forage plants, shrubs are used by desert tortoises for cover and as sites for burrows. Outplanting greenhouse-grown seedlings, protected from herbivory, has successfully restored (>50% survival) a variety of shrubs on disturbed desert soils. Additionally, salvaging and reapplying topsoil using effective techniques is among the more ecologically beneficial ways to initiate plant recovery after severe disturbance. Through differences in biochemical composition and digestibility, some plant species provide better-quality forage than others. Desert tortoises selectively forage on particular annual and herbaceous perennial species (e.g., legumes), and forage selection shifts during the year as different plants grow or mature. Nonnative grasses provide low-quality forage and contribute fuel to spreading wildfires, which damage or kill shrubs that tortoises use for cover. Maintaining a diverse “menu” of native annual forbs and decreasing nonnative grasses are priorities for restoring most desert tortoise habitats. Reducing herbivory by nonnative animals, carefully timing herbicide applications, and strategically augmenting annual forage plants via seeding show promise for improving tortoise forage quality. Roads, another disturbance, negatively affect habitat in numerous ways (e.g., compacting soil, altering hydrology). Techniques such as recontouring road berms to reestablish drainage patterns, vertical mulching (“planting” dead plant material), and creating barriers to prevent trespasses can assist natural recovery on decommissioned backcountry roads. Most habitat enhancement efforts to date have focused on only one factor at a time (e.g., providing fencing) and have not included proactive restoration activities (e.g., planting native species on disturbed soils). A research and management priority in recovering desert tortoise habitats is implementing an integrated set of restorative habitat enhancements (e.g., reducing nonnative plants, improving forage quality, augmenting native perennial plants, and ameliorating altered hydrology) and monitoring short- and long-term indicators of habitat condition and the responses of desert tortoises to habitat restoration.

Variation in plasma lipids during the reproductive cycle of male and female desert tortoises, Gopherus agassizii.

PubMed

Lance, Valentine A; Place, Allen R; Grumbles, Janice S; Rostal, David C

2002-12-01

Plasma triacylglycerol, phospholipid, cholesterol, cholesterol esters, fatty acids, and total lipids were measured in 30 female and 20 male desert tortoises (Gopherus agassizii) during the annual reproductive cycle in the eastern Mojave desert, Nevada. Blood samples were collected at monthly intervals from April to October. All lipid fractions, with the exception of free fatty acids, were significantly higher in female plasma than in male plasma in all months of the year. In contrast, free fatty acids were higher in male plasma than in female plasma in all months. The seasonal pattern in estradiol secretion mirrored that of triacylglycerol, phospholipid, cholesterol, and total lipid, all of which showed a significant correlation with the hormone. Estradiol and the vitellogenesis-associated lipids were all significantly higher in August, September, October, and April than in June. The seasonal variation in cholesterol ester levels in females did not correlate with any of the reproductive events and did not appear to be involved in yolk precursor formation. Total lipid in males showed a negative correlation with testosterone and spermatogenesis. Individual fatty acids in the June and August samples (at the highest and lowest estradiol levels) were compared in male and female plasma. The percent of C18:3n3, C18:2n6, C18:1n9, C20:5n3, and C22:5 were significantly higher in the June female plasma sample than in the August sample. Docosahexanoic (C22:6n3) acid was barely detectable in female plasma in either month. Copyright 2002 Wiley-Liss, Inc.

Gopherus Agassizii (Desert Tortoise). Predation/Mountain Lions (Pre-Print)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paul D. Greger and Philip A. Medica

2009-01-01

During a long-term study on tortoise growth within 3 fenced 9-ha enclosures in Rock Valley, Nevada Test Site (NTS), Nye County, Nevada, USA, tortoises have been captured annually since 1964 (Medica et al. 1975. Copeia 1975:630-643; Turner et al. 1987. Copeia 1987:974-979). Between early August and mid October 2003 we observed a significant mortality event. The Rock Valley enclosures were constructed of 6 x 6 mm mesh 1.2 m wide hardware cloth, buried 0.3 m in the soil with deflective flashing on both sides on the top to restrict the movement of small mammals and lizards from entering or leavingmore » the enclosures (Rundel and Gibson 1996, Ecological communities and process in a Mojave Desert ecosystem: Rock Valley, Nevada, Cambridge University Press, Great Britain. 369 pp.). On August 6, 2003, the carcass of an adult female Desert Tortoise No.1411 (carapace length 234 mm when alive) was collected while adult male tortoise No.4414 (carapace length 269 mm) was observed alive and in good health on the same day. Subsequently the carcass of No.4414 was found on October 16, 2003. Between October 16-17, 2003, the remains of 6 (5 adult and 1 juvenile) Desert Tortoises were found, some within each of the 3 enclosures in Rock Valley. A seventh adult tortoise was found on September 26, 2006, its death also attributed to the 2003 mortality event based upon the forensic evidence. Each of the 7 adult Desert Tortoises had the central portion of their carapace broken open approximately to the dorsal portion of the marginal scutes while the plastron was still intact (Figure 1A). Adjacent to 7 of the 8 remains we located numerous bone fragments including parts of the carapace and limbs as well as dried intestines in a nearby Range Rhatany (Krameria parvifolia) shrub. The significance of the frequent use of this shrub is puzzling. Three of the Desert Tortoise shell remains possessed distinctive intercanine punctures measuring 55-60 mm center to center indicating that this was an adult sized Mountain Lion. By comparison, a 2 year old male Mountain Lion salvaged on NTS had an upper intercanine bite width of 45 mm, and a 6 month old kitten measured 35mm respectively. The Mountain Lion (Puma concolor) is the only predator that exists in southern Nevada that could possibly have a bite with a gap between its upper canine teeth that large (Murmann et al. 2006. J. Forensic Sci. 51:846-860). The appearance of the shell remains in Figure 1A is similar to that depicting Jaguar (Panthera onca) predation, on the Amazonian Tortoise (Geochelone denticulata) as illustrated by Emmons (1989. J. Herpetol. 23:311-314) with the majority of the carapace broken open and the plastron still intact. Predation of Desert Tortoises by Mountain Lions was also documented in 1993 in southern Arizona (Little Shipp Wash Plot), where 7 of 8 carcasses found were attributed to Mountain Lion predation (Averill-Murray et al. 2002. In. T.R.Van Devender [ed.], The Sonoran Desert Tortoise: Natural History, Biology, and Conservation, pp.109-134. University of Arizona Press and Arizona-Sonora Desert Museum, Tucson, Arizona). Similarly, predation by a Mountain Lion has been reported on the Argentine Tortoise (Chelonoidis chilensis) in Argentina (Acosta et al. 2004. Herpetol. Review 35:53-54), and a Mountain Lion kitten was observed to kill and consume a portion of the carapace of a Texas Tortoise (Gopherus berlandieri) in west Texas (Adams et al. 2006. Southwestern Nat. 51:581-581). Over the past 45 years this Desert Tortoise population has been monitored yearly, with no prior evidence of predation to tortoises within the fenced enclosures. On several occasions other predators such as Bobcats (Lynx rufus) have been observed within the study enclosures for as long as a week. Evidence of Kit Fox (Vulpes macrotus) sign has been observed on numerous occasions, and a Spotted Skunk (Spilogale putorius) and Longtail Weasels (Mustela frenata) have been captured and released (B.G. Maza, pers. comm.; Medica 1990. Great Basin Nat. 50:83-84), while Coyotes (Canis latrans) were never observed within the fenced enclosures. Prior to this predation event in Rock Valley, 17 Desert Tortoises were alive between 2000 and 2002, only 7 were known to be alive in 2004, while 2 tortoises have not been seen since 2002. Predation studies of Mountain Lions indicate that these events may be an example of a learned behavior of individual animals developing a preference for a prey (Logan and Sweanor 2001, Desert Puma: Evolutionary ecology and conservation of an enduring carnivore. Hornocker Wildlife Institute, Island Press, Washington. 463 pp.; Creeden and Graham 1997, Desert Bighorn Council Transactions. p. 37-43), or the plight of a large predator locating an available source of food while passing through low elevation Mojave Desert habitat in late summer or early fall.« less

Making molehills out of mountains: landscape genetics of the Mojave desert tortoise

USGS Publications Warehouse

Hagerty, Bridgette E.; Nussear, Kenneth E.; Esque, Todd C.; Tracy, C. Richard

2010-01-01

Heterogeneity in habitat often influences how organisms traverse the landscape matrix that connects populations. Understanding landscape connectivity is important to determine the ecological processes that influence those movements, which lead to evolutionary change due to gene flow. Here, we used landscape genetics and statistical models to evaluate hypotheses that could explain isolation among locations of the threatened Mojave desert tortoise (Gopherus agassizii). Within a causal modeling framework, we investigated three factors that can influence landscape connectivity: geographic distance, barriers to dispersal, and landscape friction. A statistical model of habitat suitability for the Mojave desert tortoise, based on topography, vegetation, and climate variables, was used as a proxy for landscape friction and barriers to dispersal. We quantified landscape friction with least-cost distances and with resistance distances among sampling locations. A set of diagnostic partial Mantel tests statistically separated the hypotheses of potential causes of genetic isolation. The best-supported model varied depending upon how landscape friction was quantified. Patterns of genetic structure were related to a combination of geographic distance and barriers as defined by least-cost distances, suggesting that mountain ranges and extremely low-elevation valleys influence connectivity at the regional scale beyond the tortoises' ability to disperse. However, geographic distance was the only influence detected using resistance distances, which we attributed to fundamental differences between the two ways of quantifying friction. Landscape friction, as we measured it, did not influence the observed patterns of genetic distances using either quantification. Barriers and distance may be more valuable predictors of observed population structure for species like the desert tortoise, which has high dispersal capability and a long generation time.

A strategy for prioritizing threats and recovery actions for at-risk species.

PubMed

Darst, Catherine R; Murphy, Philip J; Strout, Nathan W; Campbell, Steven P; Field, Kimberleigh J; Allison, Linda; Averill-Murray, Roy C

2013-03-01

Ensuring the persistence of at-risk species depends on implementing conservation actions that ameliorate threats. We developed and implemented a method to quantify the relative importance of threats and to prioritize recovery actions based on their potential to affect risk to Mojave desert tortoises (Gopherus agassizii). We used assessments of threat importance and elasticities of demographic rates from population matrix models to estimate the relative contributions of threats to overall increase in risk to the population. We found that urbanization, human access, military operations, disease, and illegal use of off highway vehicles are the most serious threats to the desert tortoise range-wide. These results suggest that, overall, recovery actions that decrease habitat loss, predation, and crushing will be most effective for recovery; specifically, we found that habitat restoration, topic-specific environmental education, and land acquisition are most likely to result in the greatest decrease in risk to the desert tortoise across its range. In addition, we have developed an application that manages the conceptual model and all supporting information and calculates threat severity and potential effectiveness of recovery actions. Our analytical approach provides an objective process for quantifying threats, prioritizing recovery actions, and developing monitoring metrics for those actions for adaptive management of any at-risk species.

Effects of climatic variation on field metabolism and water relations of desert tortoises

USGS Publications Warehouse

Henen, B.T.; Peterson, C.C.; Wallis, I.R.; Berry, K.H.; Nagy, K.A.

1998-01-01

We used the doubly labeled water method to measure the field metabolic rates (FMRs, in kJ kg-1 day-1) and water flux rates (WIRs, in ml H2O kg-1 day-1) of adult desert tortoises (Gopherus agassizii) in three parts of the Mojave Desert in California over a 3.5-year period, in order to develop insights into the physiological responses of this threatened species to climate variation among sites and years. FMR, WIR, and the water economy index (WEI, in ml H2O kJ-1, an indicator of drinking of free water) differed extensively among seasons, among study sites, between sexes, and among years. In high-rainfall years, males had higher FMRs than females. Average daily rates of energy and water use by desert tortoises were extraordinarily variable: 28-fold differences in FMR and 237-fold differences in WIR were measured. Some of this variation was due to seasonal conditions, with rates being low during cold winter months and higher in the warm seasons. However, much of the variation was due to responses to year-to-year variation in rainfall. Annual spring peaks in FMR and WIR were higher in wet years than in drought years. Site differences in seasonal patterns were apparently due to geographic differences in rainfall patterns (more summer rain at eastern Mojave sites). In spring 1992, during an El Nino (ENSO) event, the WEI was greater than the maximal value obtainable from consuming succulent vegetation, indicating copious drinking of rainwater at that time. The physiological and behavioral flexibility of desert tortoises, evident in individuals living at all three study sites, appears central to their ability to survive droughts and benefit from periods of resource abundance. The strong effects of the El Nino (ENSO) weather pattern on tortoise physiology, reproduction, and survival elucidated in this and other studies suggest that local manifestations of global climate events could have a long-term influence on the tortoise populations in the Mojave Desert.

KSC-03PD-1924

NASA Technical Reports Server (NTRS)

2003-01-01

KENNEDY SPACE CENTER, FLA. A blue-black indigo snake is seen crossing a roadway inside the Center. Indigo snakes are active during the day and spend a great deal of time foraging for food and mates. They often hide in gopher tortoise burrows (the tortoises dont seem to mind) in sandy scrub habitats. The longest snakes in the United States, some individuals reach almost nine feet in length. In 1978, the U.S. Fish and Wildlife Service listed indigo snakes as a threatened species in all portions of its range; federal protection has helped to stop collection of these snakes from the wild. The numbers of indigo snakes are still declining throughout most of the Southeast, especially Georgia, Florida, Alabama, and Mississippi. Habitat loss and fragmentation is the main problem facing these snakes today. KSC shares a boundary with the Merritt Island National Wildlife Refuge, which encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles.

Increasing participation in incentive programs for biodiversity conservation.

PubMed

Sorice, Michael G; Oh, Chi-Ok; Gartner, Todd; Snieckus, Mary; Johnson, Rhett; Donlan, C Josh

2013-07-01

Engaging private landowners in conservation activities for imperiled species is critical to maintaining and enhancing biodiversity. Market-based approaches can incentivize conservation behaviors on private lands by shifting the benefit-cost ratio of engaging in activities that result in net conservation benefits for target species. In the United States and elsewhere, voluntary conservation agreements with financial incentives are becoming an increasingly common strategy. While the influence of program design and delivery of voluntary conservation programs is often overlooked, these aspects are critical to achieving the necessary participation to attain landscape-scale outcomes. Using a sample of family-forest landowners in the southeast United States, we show how preferences for participation in a conservation program to protect an at-risk species, the gopher tortoise (Gopherus polyphemus), are related to program structure, delivery, and perceived efficacy. Landowners were most sensitive to programs that are highly controlling, require permanent conservation easements, and put landowners at risk for future regulation. Programs designed with greater levels of compensation and that support landowners' autonomy to make land management decisions can increase participation and increase landowner acceptance of program components that are generally unfavorable, like long-term contracts and permanent easements. There is an inherent trade-off between maximizing participation and maximizing the conservation benefits when designing a conservation incentive program. For conservation programs targeting private lands to achieve landscape-level benefits, they must attract a critical level of participation that creates a connected mosaic of conservation benefits. Yet, programs with attributes that strive to maximize conservation benefits within a single agreement (and reduce risks of failure) are likely to have lower participation, and thus lower landscape benefits. Achieving levels of landowner participation in conservation agreement programs that deliver lasting, landscape-level benefits requires careful attention not only to how the program structure influences potential conservation benefits, but also how it influences landowners and their potential to participate.

Problems with sampling desert tortoises: A simulation analysis based on field data

USGS Publications Warehouse

Freilich, J.E.; Camp, R.J.; Duda, J.J.; Karl, A.E.

2005-01-01

The desert tortoise (Gopherus agassizii) was listed as a U.S. threatened species in 1990 based largely on population declines inferred from mark-recapture surveys of 2.59-km2 (1-mi2) plots. Since then, several census methods have been proposed and tested, but all methods still pose logistical or statistical difficulties. We conducted computer simulations using actual tortoise location data from 2 1-mi2 plot surveys in southern California, USA, to identify strengths and weaknesses of current sampling strategies. We considered tortoise population estimates based on these plots as "truth" and then tested various sampling methods based on sampling smaller plots or transect lines passing through the mile squares. Data were analyzed using Schnabel's mark-recapture estimate and program CAPTURE. Experimental subsampling with replacement of the 1-mi2 data using 1-km2 and 0.25-km2 plot boundaries produced data sets of smaller plot sizes, which we compared to estimates from the 1-mi 2 plots. We also tested distance sampling by saturating a 1-mi 2 site with computer simulated transect lines, once again evaluating bias in density estimates. Subsampling estimates from 1-km2 plots did not differ significantly from the estimates derived at 1-mi2. The 0.25-km2 subsamples significantly overestimated population sizes, chiefly because too few recaptures were made. Distance sampling simulations were biased 80% of the time and had high coefficient of variation to density ratios. Furthermore, a prospective power analysis suggested limited ability to detect population declines as high as 50%. We concluded that poor performance and bias of both sampling procedures was driven by insufficient sample size, suggesting that all efforts must be directed to increasing numbers found in order to produce reliable results. Our results suggest that present methods may not be capable of accurately estimating desert tortoise populations.

Not putting all their eggs in one basket: bet-hedging despite extraordinary annual reproductive output of desert tortoises

USGS Publications Warehouse

Lovich, Jeffrey E.; Ennen, Joshua R.; Yackulic, Charles B.; Meyer-Wilkins, Kathie; Agha, Mickey; Loughran, Caleb L.; Bjurlin, Curtis; Austin, Meaghan; Madrak, Sheila V.

2015-01-01

Bet-hedging theory makes the counter-intuitive prediction that, if juvenile survival is low and unpredictable, organisms should consistently reduce short-term reproductive output to minimize the risk of reproductive failure in the long-term. We investigated the long-term reproductive output of an Agassiz's desert tortoise (Gopherus agassizii) population and conformance to a bet-hedging strategy of reproduction in an unpredictable but comparatively productive environment. Most females reproduced every year, even during periods of low precipitation and poor germination of food plants, and the mean percentage of reproducing females did not differ significantly on an annual basis. Although mean annual egg production (clutch size × clutch frequency) differed significantly among years, mean clutch size and mean clutch frequency remained relatively constant. During an El Niño year, mean annual egg production and mean annual clutch frequency were the highest ever reported for this species. Annual egg production was positively influenced by maternal body size but clutch size and clutch frequency were not. Our long-term results confirm earlier conclusions based on short-term research that desert tortoises have a bet-hedging strategy of producing small clutches almost every year. The risk of long-term reproductive failure is minimized in unpredictable environments, both through time by annually producing multiple small clutches over a long reproductive lifespan, even in years of low resource availability, and through space by depositing multiple annual clutches in different locations. The extraordinary annual reproductive output of this population appears to be the result of a typically high but unpredictable biomass of annual food plants at the site relative to tortoise habitat in dryer regions. Under the comparatively productive but unpredictable conditions, tortoises conform to predictions of a bet-hedging strategy of reproduction with relatively small but consistent clutch sizes.

Abundance and distribution of selected elements in soils, stream sediments, and selected forage plants from desert tortoise habitats in the Mojave and Colorado deserts, USA

USGS Publications Warehouse

Chaffee, M.A.; Berry, K.H.

2006-01-01

A baseline and background chemical survey was conducted in southeastern California, USA, to identify potential sources of toxicants in natural and anthropogenically-altered habitats of the threatened desert tortoise (Gopherus agassizii). Soil, stream sediment, and plant samples were collected from six tortoise habitat study areas in the Mojave and Colorado deserts and analysed for up to 66 different elements. The chemical analyses provided new information on the abundances and distributions of selected elements in this region. Soil, stream-sediment, and plant analyses showed distinct variations in bulk chemistries from locality to locality. Variations were, in general, consistent with the many types of exposed rock units in the region, their highly variable bulk mineralogies, and chemical contents. Of elements in soils that might have been toxic to tortoises, only As seemed to be anomalous region-wide. Some soil and plant anomalies were clearly anthropogenic. In the Rand and Atolia mining districts, soil anomalies for As, Au, Cd, Hg, Sb, and(or) W and plant anomalies for As, Sb, and(or) W extend as far as ???15 km outward from the present area of mining; soils containing anomalous Hg were found at least 6 km away from old piles of tailings. The anomalous concentrations of As and Hg may have been the source of elevated levels of these elements found in ill tortoises from the region. In the Goldstone mining district, soil anomalies extended several km from the mining area. These areas probably represented anthropogenic surface contamination of dust redistributed by wind, vehicles, and rainfall. One of two study areas transected by a paved road (Chemehuevi Valley) showed weakly elevated levels of Pb, which extended as far as ???22 m from the pavement edge and were probably related to vehicle exhaust. No soil or plant samples from historically used military areas (Goldstone, Goffs, Chemehuevi Valley, Chuckwalla Bench) contained anomalous concentrations of the elements As, Cu, Cr, Fe, Pb, or Zn that could be ascribed to military maneuvers, vehicles, or ordnance. For future studies, the distribution and abundance of elements in the tortoise forage plants need to be evaluated for the respective roles of dust and systemic uptake. Additional chemical data from tortoise necropsies and nutritional studies are needed to determine the effects of potentially toxic elements in tortoise habitats on their health. ?? 2006 Elsevier Ltd. All rights reserved.

Variation in annual clutch phenology of desert tortoises (Gopherus morafkai) in the Sonoran Desert of Arizona

USGS Publications Warehouse

Lovich, Jeffrey E.; Averill-Murray, Roy C.; Agha, Mickey; Ennen, Joshua R.; Austin, Meaghan

2017-01-01

The phenology of egg production and oviposition in organisms affects survival and development of neonates and thus, both offspring and maternal fitness. In addition, in organisms with environmental sex determination, clutch phenology can affect hatchling sex ratios with attendant effects on population demography. The rapid rate of contemporary climate change might disrupt reproductive phenologies that evolved to match environmental conditions. To better understand the response of clutch phenology to annual and long-term changes in climate, we studied a population of Sonoran Desert Tortoises (Gopherus morafkai) in Arizona in 1993 and 1997–2005, specifically quantifying three phenophases, including (1) the estimated time of appearance of shelled eggs in females, (2) the estimated time that eggs were last visible in X-radiographs, and (3) the duration of the interval between the first two events. The mean date for appearance of shelled eggs was 6 June, and the mean date they were last visible was 26 June. After controlling for individual female effects, these dates were different among years. The total number of days that eggs were visible across all females within a year differed among years, but the mean duration of time that clutches were visible, after controlling for individual female effects, was similar among years. Three of 18 females exhibited interannual egg retention on 5 occasions from 52 clutches. Although G. morafkai ovulates only one clutch per year, they might oviposit up to two because of interannual egg retention. Most females produced shelled eggs through heat-unit accumulation achieving 8.3 degree days within a 14-d moving average. The ability to vary the timing of egg formation and oviposition might buffer G. morafkai from some of the effects of predicted increases in temperatures, but species-specific information on developmental temperatures and nesting behavior are needed to determine whether or not the species will be able to produce viable clutches of mixed sex ratios in a warmer climate.

Nest site characteristics, nesting movements, and lack of long-term nest site fidelity in Agassiz's desert tortoises at a wind energy facility in southern California

USGS Publications Warehouse

Lovich, Jeffrey E.; Agha, Mickey; Yackulic, Charles B.; Meyer-Wilkins, Kathie; Bjurlin, Curtis; Ennen, Joshua R.; Arundel, Terry R.; Austin, Meaghan

2014-01-01

Nest site selection has important consequences for maternal and offspring survival and fitness. Females of some species return to the same nesting areas year after year. We studied nest site characteristics, fidelity, and daily pre-nesting movements in a population of Agassiz’s desert tortoises (Gopherus agassizii) at a wind energy facility in southern California during two field seasons separated by over a decade. No females returned to the same exact nest site within or between years but several nested in the same general area. However, distances between first and second clutches within a year (2000) were not significantly different from distances between nests among years (2000 and 2011) for a small sample of females, suggesting some degree of fidelity within their normal activity areas. Environmental attributes of nest sites did not differ significantly among females but did among years due largely to changes in perennial plant structure as a result of multiple fires. Daily pre-nesting distances moved by females decreased consistently from the time shelled eggs were first visible in X-radiographs until oviposition, again suggesting some degree of nest site selection. Tortoises appear to select nest sites that are within their long-term activity areas, inside the climate-moderated confines of one of their self-constructed burrows, and specifically, at a depth in the burrow that minimizes exposure of eggs and embryos to lethal incubation temperatures. Nesting in “climate-controlled” burrows and nest guarding by females relaxes some of the constraints that drive nest site selection in other oviparous species.

Ecology of a population of subsidized predators: Common ravens in the central Mojave Desert, California

USGS Publications Warehouse

Boarman, W.I.; Patten, M.A.; Camp, R.J.; Collis, S.J.

2006-01-01

Human subsidies have resulted in the rapid growth of populations of common ravens (Corvus corax) in the Mojave Desert. This is a management concern because ravens prey on threatened desert tortoises (Gopherus agassizii). We conducted weekly counts for 29 months at 10 sites on the US Army's National Training Center, Fort Irwin, California to evaluate factors affecting the distribution of ravens. Raven abundance varied seasonally, diurnally, and with human abundance. It was greatest near resource subsidies, specifically the landfill and sewage ponds. Although other studies have documented heavy use of landfills by ravens, the use of sewage ponds had not been previously reported in the published literature. We suggest that raven management should focus on reducing access to anthropogenic resources. ?? 2006.

A continuation of base-line studies for environmentally monitoring Space Transportation Systems (STS) at John F. Kennedy Space Center. Volume 4: Threatened and endangered species of the Kennedy Space Center. Part 2: Threatened and endangered birds and other threatened and endangered forms

NASA Technical Reports Server (NTRS)

Ehrhart, L. M.

1980-01-01

Data are presented which were collected by ground and aerial surveillance of 37 species of birds observed within the environs of KSC which are on lists of rare and endangered biota in Florida. Additional information was obtained on other threatened species such as the West Indian manatee, the salt marsh snake, the Indigo snake, the Gopher tortoise, the American alligator, and the Florida mouse. Results of the literature search were used to obtain a historical perspective and aid in the analysis of the field data collected.

Tissue carbon incorporation rates and diet-to-tissue discrimination in ectotherms: tortoises are really slow.

PubMed

Murray, Ian W; Wolf, Blair O

2012-01-01

Abstract Understanding carbon incorporation rates and diet-to-tissue discrimination (Δ(13)C(tissue-diet)) in animals is necessary to interpret stable isotope data collected from animals in the field. Our current understanding of the carbon dynamics in terrestrial ectotherms such as snakes, lizards, and turtles is poorly developed. Here we use a diet switch experiment to estimate carbon incorporation rates and diet-to-tissue discrimination factors in growing desert tortoises (Gopherus agassizii). Average carbon retention times for red blood cells (RBCs) and plasma were 126.7 ± 40.3 and 32.9 ± 14.5 days, respectively. Tissue carbon incorporation rates were affected by both growth and metabolism, with growth accounting for 50% of the carbon turnover in RBCs and 13% of carbon turnover in plasma. At equilibrium, scute keratin (0.8 ± 0.1) and plasma (1.0 ± 0.2) showed enriched discrimination values (Δ(13)C) compared to the test diet, but RBC Δ(13)C values were indistinguishable from diet (0.2 ± 0.3). We also found that new keratin continued to contribute significant material to previously grown keratin rings on the tortoise's shell. Changes in the δ(13)C of previously laid down growth rings indicated that the old rings closest to the region of new growth received about 73% of the carbon from the current diet; these data suggest that the interpretation of dietary history using growth rings must recognize that each ring may represent the weighted average of the diet over several seasons. These results continue to highlight the importance of laboratory experiments in interpreting isotopic data derived from field studies.

Ecological Monitoring and Compliance Program 2006 Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

David C. Anderson; Paul D. Greger; Derek B. Hall

2007-03-01

The Ecological Monitoring and Compliance program (EMAC), funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office (NNSA/NSO), monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by National Security Technologies LLC (NSTec) during the Calendar Year 2006. Program activities included: (a) biological surveys at proposed construction sites, (b) desert tortoise compliance, (c) ecosystem mapping and data management, (d) sensitive plant species monitoring, (e) sensitive and protected/regulated animal monitoring, (f) habitat monitoring, (g) habitat restoration monitoring, and (h)more » monitoring of the Nonproliferation Test and Evaluation Complex (NPTEC). Sensitive and protected/regulated species of the NTS include 44 plants, 1 mollusk, 2 reptiles, over 250 birds, and 26 mammals protected, managed, or considered sensitive as per state or federal regulations and natural resource agencies and organizations. The threatened desert tortoise (Gopherus agassizii) is the only species on the NTS protected under the Endangered Species Act. Biological surveys for the presence of sensitive and protected/regulated species and important biological resources on which they depend were conducted for 34 projects. A total of 342.1 hectares (ha) (845.37 acres [ac]) was surveyed for these projects. Sensitive and protected/regulated species and important biological resources found included: 2 inactive tortoise burrows, 2 western burrowing owls (Athene cunicularia hypugaea), several horses (Equus caballus), 2 active predator burrows, mature Joshua trees (Yucca brevifolia), yuccas and cacti; and also 1 bird nest (2 eggs), 1 barn owl (Tyto alba) and 2 great-horned owls (Bubo virginianus). NSTec provided a written summary report of all survey findings and mitigation recommendations, where applicable. All flagged burrows were avoided during construction activities. Twenty one of the 34 projects had sites within the distribution range of the threatened desert tortoise. NNSA/NSO must comply with the terms and conditions of a permit (called a Biological Opinion) from the U.S. Fish and Wildlife Service (FWS) when conducting work in tortoise habitat. No tortoises were found in or displaced from project areas. No desert tortoises were accidentally injured or killed, nor were any captured or displaced from project sites. One desert tortoise was accidentally killed along a paved road. One site specific re-vegetation plan was submitted this year as required by the desert tortoise habitat re-vegetation plan approved in 2004. This year a total of 1.89 ha (4.69 ac) of tortoise habitat was disturbed. Re-vegetation of habitat at the Bren Tower burn was completed in the spring of 2006. In the summer of 2006, NSTec scientists prepared a Biological Assessment of the security activities that were being conducted at the Device Assembly Facility (DAF). NNSA requested a Biological Opinion from FWS in late 2006. Ecosystem mapping and data management in 2006 focused primarily on two tasks: (a) converting hardcopies of about 17 reports (EMAC annual reports and selected topical reports from 1996 to 2003) into electronic versions (Portable Document Format [PDF] files) to facilitate electronic document exchange, rapid retrieval, duplication, and printing, and (b) conducting an annual vegetation survey to determine wildland fire hazards on the NTS. Copies of the PDF documents were sent to DOE's Office of Scientific and Technical Information website in Oak Ridge, Tennessee, and the DOE National Nuclear Security Administration Nevada Site Office (NNSA/NSO) Public Reading Facility.« less

Ecological Monitoring and Compliance Program 2006 Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

David C. Anderson; Paul D. Greger; Derek B. Hall

2007-03-01

The Ecological Monitoring and Compliance program (EMAC), funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office (NNSA/NSO), monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by National Security Technologies LLC (NSTec) during the Calendar Year 2006. Program activities included: (a) biological surveys at proposed construction sites, (b) desert tortoise compliance, (c) ecosystem mapping and data management, (d) sensitive plant species monitoring, (e) sensitive and protected/regulated animal monitoring, (f) habitat monitoring, (g) habitat restoration monitoring, and (h)more » monitoring of the Nonproliferation Test and Evaluation Complex (NPTEC). Sensitive and protected/regulated species of the NTS include 44 plants, 1 mollusk, 2 reptiles, over 250 birds, and 26 mammals protected, managed, or considered sensitive as per state or federal regulations and natural resource agencies and organizations. The threatened desert tortoise (Gopherus agassizii) is the only species on the NTS protected under the Endangered Species Act. Biological surveys for the presence of sensitive and protected/regulated species and important biological resources on which they depend were conducted for 34 projects. A total of 342.1 hectares (ha) (845.37 acres [ac]) was surveyed for these projects. Sensitive and protected/regulated species and important biological resources found included: 2 inactive tortoise burrows, 2 western burrowing owls (Athene cunicularia hypugaea), several horses (Equus caballus), 2 active predator burrows, mature Joshua trees (Yucca brevifolia), yuccas and cacti; and also 1 bird nest (2 eggs), 1 barn owl (Tyto alba) and 2 great-horned owls (Bubo virginianus). NSTec provided a written summary report of all survey findings and mitigation recommendations, where applicable. All flagged burrows were avoided during construction activities. Twenty one of the 34 projects had sites within the distribution range of the threatened desert tortoise. NNSA/NSO must comply with the terms and conditions of a permit (called a Biological Opinion) from the U.S. Fish and Wildlife Service (FWS) when conducting work in tortoise habitat. No tortoises were found in or displaced from project areas. No desert tortoises were accidentally injured or killed, nor were any captured or displaced from project sites. One desert tortoise was accidentally killed along a paved road. One site specific revegetation plan was submitted this year as required by the desert tortoise habitat revegetation plan approved in 2004. This year a total of 1.89 ha (4.69 ac) of tortoise habitat was disturbed. Revegetation of habitat at the Bren Tower burn was completed in the spring of 2006. In the summer of 2006, NSTec scientists prepared a Biological Assessment of the security activities that were being conducted at the Device Assembly Facility (DAF). NNSA requested a Biological Opinion from FWS in late 2006. Ecosystem mapping and data management in 2006 focused primarily on two tasks: (a) converting hardcopies of about 17 reports (EMAC annual reports and selected topical reports from 1996 to 2003) into electronic versions (Portable Document Format [PDF] files) to facilitate electronic document exchange, rapid retrieval, duplication, and printing, and (b) conducting an annual vegetation survey to determine wildland fire hazards on the NTS.« less

Female Agassiz’s desert tortoise activity at a wind energy facility in southern California: The influence of an El Niño event

USGS Publications Warehouse

Ennen, Josh R.; Meyer-Wilkins, Kathie; Lovich, Jeffrey

2012-01-01

We compared spring-summer activity of adult female Agassiz’s Desert Tortoises (Gopherus agassizii) among three consecutive years (1997, 1998, and 1999) that differed dramatically in winter rainfall and annual plant production at a wind energy facility in the Sonoran Desert of southern California. Winter rainfall was approximately 71%, 190%, and 17% of the long-term average (October-March = 114 mm) for this area in water years (WY) 1997, 1998, and 1999, respectively. The substantial precipitation caused by an El Niño Southern Oscillation (ENSO) event in WY 1998 produced a generous annual food plant supply (138.2 g dry biomass/ m2) in the spring. Primary production of winter annuals during below average rainfall years (WY 1997 and WY 1999) was reduced to 98.3 and 0.2 g/m2, respectively. Mean rates of movement and mean body condition indices (mass/length) did not differ significantly among the years. The drought year following ENSO (WY 1999) was statistically similar to ENSO in every other measured value, while WY 1997 (end of a two year drought) was statistically different from ENSO using activity area, minimum number of burrows used, and percentage of non-movements. Our data suggest that female G. agassizii activity can be influenced by environmental conditions in previous years.

Yucca Mountain Biological Resources Monitoring Program. Progress report, January 1994--December 1994

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-07-01

The US Department of Energy (DOE) is required by the Nuclear Waste Policy Act of 1982 (as amended in 1987) to study and characterize the suitability of Yucca Mountain as a potential geological repository for high-level nuclear waste. During site characterization, the DOE will conduct a variety of geotechnical, geochemical, geological, and hydrological studies to determine the suitability of Yucca Mountain as a potential repository. To ensure that site characterization activities do not adversely affect the environment at Yucca Mountain, a program has been implemented to monitor and mitigate potential impacts and ensure activities comply with applicable environmental regulations. Thismore » report describes the activities and accomplishments of EG and G Energy Measurements, Inc. (EG and G/EM) from January 1994 through December 1994 for six program areas within the Terrestrial Ecosystem component of the environmental program for the Yucca Mountain Site Characterization Project (YMP): Site Characterization Effects, Desert Tortoises (Gopherus agassizii), Habitat Reclamation, Monitoring and Mitigation, Radiological Monitoring, and Biological Support.« less

Drawing a line in the sand: Effectiveness of off-highway vehicle management in California's Sonoran desert

USGS Publications Warehouse

Custer, Nathan; Defalco, Lesley A.; Nussear, Kenneth E.; Esque, Todd C.

2017-01-01

Public land policies manage multiple uses while striving to protect vulnerable plant and wildlife habitats from degradation; yet the effectiveness of such policies are infrequently evaluated, particularly for remote landscapes that are difficult to monitor. We assessed the use and impacts of recreational vehicles on Mojave Desert washes (intermittent streams) in the Chemehuevi Desert Wildlife Management Area (DWMA) of southern California. Wash zones designated as open and closed to off-highway vehicle (OHV) activity were designed in part to protect Mojave desert tortoise (Gopherus agassizii) habitat while allowing recreation in designated areas. OHV tracks were monitored in washes located near access roads during winter and early spring holidays – when recreation is typically high – and at randomly dispersed locations away from roads. Washes near access roads had fewer vehicle tracks within closed than open zones; further away from roads, OHV tracks were infrequent and their occurrence was not different between wash designations. Washes were in better condition in closed zones following major holidays as indicated by less vegetation damage, presence of trash, and wash bank damage. Furthermore, the frequency of washes with live tortoises and their sign was marginally greater in closed than open wash zones. Collectively, these results suggest that low impacts to habitats in designated closed wash zones reflect public compliance with federal OHV policy and regulations in the Chemehuevi DWMA during our study. Future monitoring to contrast wash use and impacts during other seasons as well as in other DWMAs will elucidate spatial and temporal patterns of recreation in these important conservation areas.

Drawing a line in the sand: Effectiveness of off-highway vehicle management in California's Sonoran desert.

PubMed

Custer, Nathan A; DeFalco, Lesley A; Nussear, Kenneth E; Esque, Todd C

2017-05-15

Public land policies manage multiple uses while striving to protect vulnerable plant and wildlife habitats from degradation; yet the effectiveness of such policies are infrequently evaluated, particularly for remote landscapes that are difficult to monitor. We assessed the use and impacts of recreational vehicles on Mojave Desert washes (intermittent streams) in the Chemehuevi Desert Wildlife Management Area (DWMA) of southern California. Wash zones designated as open and closed to off-highway vehicle (OHV) activity were designed in part to protect Mojave desert tortoise (Gopherus agassizii) habitat while allowing recreation in designated areas. OHV tracks were monitored in washes located near access roads during winter and early spring holidays - when recreation is typically high - and at randomly dispersed locations away from roads. Washes near access roads had fewer vehicle tracks within closed than open zones; further away from roads, OHV tracks were infrequent and their occurrence was not different between wash designations. Washes were in better condition in closed zones following major holidays as indicated by less vegetation damage, presence of trash, and wash bank damage. Furthermore, the frequency of washes with live tortoises and their sign was marginally greater in closed than open wash zones. Collectively, these results suggest that low impacts to habitats in designated closed wash zones reflect public compliance with federal OHV policy and regulations in the Chemehuevi DWMA during our study. Future monitoring to contrast wash use and impacts during other seasons as well as in other DWMAs will elucidate spatial and temporal patterns of recreation in these important conservation areas. Published by Elsevier Ltd.

Using Gopher on the Internet

DOE Office of Scientific and Technical Information (OSTI.GOV)

Davidoff, G.

This report is a complication of vugraphs with respect to the use of Gopher on Internet. There are viewgraphs on using Gopher at the University of California at Santa Cruz. Examples of other Internet Gopher servers around the world are given. Also discussed is the Library of Congress Gopher and JUGHEAD which is an acronym for Jonzy`s Universal Gopher Hierarchy Excavation And Display.

Threatened and Endangered Species Survey for Patrick Air Force Base, Florida

NASA Technical Reports Server (NTRS)

Oddy, Donna M.; Stolen, Eric D.; Schmalzer, Paul A.; Larson, Vickie L.; Hall, Patrice; Hensley, Melissa A.

1997-01-01

A review of previous environmental work conducted at Patrick Air Force Base (PAFB) indicated that several threatened, endangered, or species of special concern occurred or had the potential to occur there. This study was implemented to collect more information on protected species at PAFB. A map of landcover types was prepared for PAFB using aerial photography, groundtruthing, and a geographic information system (GIS). Herbaceous vegetation was the most common vegetation type. The second most abundant vegetation type was disturbed shrubs/exotics. The beach and associated dune vegetation comprised 3.2% of the land area, but was the most extensive natural community within PAFB. A few isolated mangrove communities exist along the Banana River. Seventy-seven species of vascular plants occurred on the dunes, including four species listed by state agencies: spider lily (Hymenocallis latifolia), prickly pear cactus (Opuntia stricta), beach star (Remirea maritima), and inkberry (Scaevola plumien). Surveys of other habitats revealed eighty-four species of vascular plants including two state-listed species: spider lily and prickly pear cactus. Many of these areas are dominated by invasive, exotic species, particularly Brazilian pepper (Schinus terebinthifolius) and Australian pine (Casuarina equisetifolia), and native species of open or disturbed sites such as camphorweed (Heterotheca subaxillaris) and beardgrass (Andropogon spp.). Due to the isolation of PAFB from other natural areas, most exotic plant populations on the base are not an immediate threat to intact native plant communities. Dune habitat was surveyed for the southeastem beach mouse (Peromyscus polionotus niveiventris) by quarterly trapping along eight 100 m transects. No beach mice were found. The limited extent of dune habitat, its fragmented condition, and the isolation of PAFB from extant populations of the beach mouse probably accounts for its absence. Surveys of birds on PAFB found an avifauna characteristic of species that occur in the Indian River Lagoon system. Twenty-five species of waterbirds were observed during quarterly surveys on PAFB, including five species listed as species of special concern by the state of Florida: Snowy Egret (Egretta thula), Little Blue Heron (Egretta caerulea), Tricolored Heron (Egretta tricolo4, White Ibis (Eudocimus albus), and Brown Pelican (Pelecanus occidentalis). The Golf Course was used extensively by almost all species of waterbirds on PAFB. Twenty-two species of shorebirds were observed on PAFB. Although no listed species were observed, the potential exists for several protected species of shorebirds to use the beach at PAFB during some parts of the year. The Airfield runways and associated grass areas were important sites at PAFB for loafing and feeding for some shorebirds. Surveys of rooftop nesting by Least Terns (Stema antillarum) on PAFB found a large colony on a rooftop in the PAFB Industrial Area. This colony produced some independent young. Two rooftop Least Tern colonies reported from previous years were inactive during 1996. A small number of Black Skimmers (Rhynchops nigee attempted to nest at the Least Ten colony but were unsuccessful. Surveys for the gopher tortoise (Gopherus polyphemus) revealed burrows and tortoises only at the Waste Study Site; five burrows and three tortoises were observed. No Florida scrub lizards (Sceloporus woodi), eastern indigo snakes (Drymarchon corais couperl), or diamondback terrapins (Malademys terrapin terrapin) were observed. American alligators (Alligator mississippiensis) were observed on the Golf Course and using ditches, ponds, and areas along the Banana River. The amount of dune habitat could be expanded by not mowing areas adjacent to the dunes to allow dune species to colonize and expand. Planting dune species as part of the beach renourishment project will also increase this habitat. Exotic plants dominate several areas on the base and are used by threatened, endangered, and species of special concern. However, the use of native vegetation in landscaping projects throughout the base would improve habitat for wildlife, and invasive, exotic plants should not be used in any horticultural plantings. Water quality of ponds, ditches, and canals is important for waterbirds; it should be maintained and protected from contamination. Nesting Least Terns are sensitive to disturbance; rooftops used for nesting should be protected from disturbance. Monitoring of Least Tern and Black Skimmer nesting should be continued to determine what roofs are being used and whether nesting is successful. Furthermore, based on the large numbers of waterbirds observed on PAFB, continued monitoring of them is recommended.

Contributions of gopher mound and casting disturbances to plant community structure in a Cascade Range meadow complex

Treesearch

M. Case; C.B. Halpern; S.A. Levin

2013-01-01

Pocket gophers (Geomyidae) are major agents of disturbance in North American grasslands. Gopher mounds bury existing plants and influence community structure through various mechanisms. However, in mountain meadows that experience winter snowpack, gophers also create winter castings, smaller tube-shaped deposits, previously ignored in studies of plant–gopher...

Gopher Is No Longer Just a Rodent: Using Gopher and World Wide Web in Composition Studies.

ERIC Educational Resources Information Center

Krause, Steve

Gopher and World Wide Web (WWW) are two useful Internet technologies for the composition and rhetoric classroom. Gopher software makes available a wide variety of text-based information in the Internet. A Gopher at Bowling Green State University offers many types of information. The World Wide Web, using a fairly simple markup language, is also…

Exploitation of pocket gophers and their food caches by grizzly bears

USGS Publications Warehouse

Mattson, D.J.

2004-01-01

I investigated the exploitation of pocket gophers (Thomomys talpoides) by grizzly bears (Ursus arctos horribilis) in the Yellowstone region of the United States with the use of data collected during a study of radiomarked bears in 1977-1992. My analysis focused on the importance of pocket gophers as a source of energy and nutrients, effects of weather and site features, and importance of pocket gophers to grizzly bears in the western contiguous United States prior to historical extirpations. Pocket gophers and their food caches were infrequent in grizzly bear feces, although foraging for pocket gophers accounted for about 20-25% of all grizzly bear feeding activity during April and May. Compared with roots individually excavated by bears, pocket gopher food caches were less digestible but more easily dug out. Exploitation of gopher food caches by grizzly bears was highly sensitive to site and weather conditions and peaked during and shortly after snowmelt. This peak coincided with maximum success by bears in finding pocket gopher food caches. Exploitation was most frequent and extensive on gently sloping nonforested sites with abundant spring beauty (Claytonia lanceolata) and yampah (Perdieridia gairdneri). Pocket gophers are rare in forests, and spring beauty and yampah roots are known to be important foods of both grizzly bears and burrowing rodents. Although grizzly bears commonly exploit pocket gophers only in the Yellowstone region, this behavior was probably widespread in mountainous areas of the western contiguous United States prior to extirpations of grizzly bears within the last 150 years.

Building and maintaining a library Gopher: traditional skills applied to emerging resources.

PubMed

Riley, R A; Shipman, B L

1995-04-01

Gopher software has emerged rapidly as a powerful tool for providing library users with organized access to Internet resources. Building and maintaining Gophers is one way in which librarians' traditional knowledge and skills are being applied in a nontraditional area. In March 1992, the University of Michigan's ULibrary Gopher was created, mainly as a means of providing access to U.S. Census data and the U.S. Department of Commerce's Economic Bulletin Board. In an effort to broaden the scope of the Gopher, librarians were asked to submit ideas for new resources to access. The result was the ULibrary Gopher Working Group, a team of eighteen librarians from six libraries on campus. The Alfred Taubman Medical Library staff drafted a menu design for life sciences resources and received basic UNIX training. In March 1993, the life sciences section of ULibrary became fully operational and now is maintained by the Taubman staff. This paper describes the history of the ULibrary Gopher and the working group, the creation and ongoing maintenance of the life sciences area of the Gopher, staffing issues, and the relationship of Gopher building to traditional collection development.

Movements of juvenile common ravens in an arid landscape

USGS Publications Warehouse

Webb, W.C.; Boarman, W.I.; Rotenberry, J.T.

2009-01-01

Movement patterns of juvenile birds are poorly understood, yet critically important ecological phenomena, especially for species with a prolonged juvenile period. We evaluated postfledging movements of juvenile common ravens (Corvus corax) in a western Mojave Desert landscape composed of a mosaic of natural and anthropogenic elements. Generally, ravens do not begin breeding until after their fourth year. We marked 2 annual cohorts of juvenile ravens and followed them from dispersal from their natal territory for up to 33 months. Movements of juvenile common ravens were similar for males and females. Conspecifics and confined livestock feeding operations represented important resources for juvenile ravens, and juveniles were rarely located in open desert. However, initial movements from the natal territory to the nearest communal point subsidy rather than the closest anthropogenic resource suggested juvenile dispersal was influenced by the combination of conspecifics and anthropogenic resources, rather than the distribution of those resources. Land managers concerned with growing raven populations should reduce access to concentrated anthropogenic resources such as landfills and dairies, which serve as important resources for juveniles. Because juvenile ravens rarely venture into open desert, reducing their numbers by lethal removal or other means is unlikely to lessen raven predation of desert tortoises (Gopherus agassizii).

Nest site characteristics and nesting success of the Western Burrowing Owl in the eastern Mojave Desert

USGS Publications Warehouse

Longshore, Kathleen M.; Crowe, Dorothy E.

2013-01-01

We evaluated nest site selection at two spatial scales (microsite, territory) and reproductive success of Western Burrowing Owls (Athene cunicularia hypugaea) at three spatial scales (microsite, territory, landscape) in the eastern Mojave Desert. We used binary logistic regression within an information-theoretic approach to assess factors influencing nest site choice and nesting success. Microsite-scale variables favored by owls included burrows excavated by desert tortoise (Gopherus agassizii), burrows with a large mound of excavated soil at the entrance, and a greater number of satellite burrows within 5 m of the nest burrow. At the territory scale, owls preferred patches with greater cover of creosote bush (Larrea tridentata) within 50 m of the nest burrow. An interaction between the presence or absence of a calcic soil horizon layer over the top of the burrow (microsite) and the number of burrows within 50 m (territory) influenced nest site choice. Nesting success was influenced by a greater number of burrows within 5 m of the nest burrow. Total cool season precipitation was a predictor of nesting success at the landscape scale. Conservation strategies can rely on management of habitat for favored and productive nesting sites for this declining species.

The Internet Gopher: An Information Sheet.

ERIC Educational Resources Information Center

Electronic Networking: Research, Applications and Policy, 1992

1992-01-01

This fact sheet about the INTERNET Gopher, an information distribution system combining features of electronic bulletin board services and databases, describes information availability, gateways with other servers, how the system works, and how to access Gopher. Addresses and telephone numbers for additional information or news about Gopher are…

76 FR 2263 - Approval and Promulgation of Air Quality Implementation Plans; Minnesota; Gopher Resource, LLC

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-13

... Gopher Smelting and Refining Company, and the change to Gopher Resource, LLC will be discussed in Section... removed contingency measures from the maintenance plan. On November 19, 2007, MPCA formally withdrew the... Conditions The existing Order refers to the facility as ``Gopher Smelting and Refining Company,'' whereas the...

Bringing Up Gopher: Access to Local & Remote Electronic Resources for University Library Users.

ERIC Educational Resources Information Center

Brown, Melvin Marlo; And Others

Some of the administrative and organizational issues in creating a gopher, specifically a library gopher for university libraries, are discussed. In 1993 the Electronic Collections Task Force of the New Mexico State University library administration began to develop a library-based gopher system that would enable users to have unlimited access to…

Gophers as geomorphic agents in the Colorado Front Range subalpine zone

NASA Astrophysics Data System (ADS)

Winchell, Eric W.; Anderson, Robert S.; Lombardi, Elizabeth M.; Doak, Daniel F.

2016-07-01

Gophers are significant geomorphic agents in many landscapes. We document activity of the northern pocket gopher (Thomomys talpoides) in two small subalpine meadows (1050-1800 m2) of the Front Range, Colorado, USA. We tracked locations and volumes of mounds and subnivean infilled tunnels over one year and probed the thickness of the biomantle within one meadow. We infer that only 5-7 gophers occupied each meadow, implying a gopher density of 28-67 ha- 1. Fractional areal coverage of the meadows by diggings suggests that within 49-95 years gophers would fully resurface the meadows. Annual volumes of excavated soil correspond to the equivalent of 1 mm of material spread evenly over the meadows. Probed meadow resistance depths reveal a pattern we interpret to be stone lines at roughly 15 cm depths; implied vertical turnover times are therefore roughly 150 years. These spatial and temporal patterns imply that gophers should be able to churn the biomantle on approximately century timescales and should fully resurface the meadow areas in similar timescales. These field data also contribute to an investigation of lateral sediment transport; given the local slope of the landscape, gopher-driven sediment transport within our two study sites suggests a landscape diffusivity of 0.008 m2y- 1. At no time do gophers occupy the forest. As evidenced by subnivean infilled tunnels, winter activity is restricted to the upslope (and hence upwind) meadow edges, which correspond to high snow cover and warm (> 0 °C) shallow subsurface soil temperatures. Subsequent activity expands downhill into the meadows and shows a distinct pulse of mound activity in late summer through early fall prior to snowfall. Local forest fire history has led to much more extensive meadows in the past, suggesting that the geomorphic influence of gophers in the landscape is much more widespread than the present distribution of meadows and may cover the entire subalpine region of the Front Range on millennial timescales.

Navigating the Internet: Evaluating Gopher Clients for Windows.

ERIC Educational Resources Information Center

Lonardo, Angela; And Others

1995-01-01

Identifies and discusses the criteria that end users might employ when evaluating a gopher client, particularly for the Windows environment. Topics include cost and availability, help features, functionality, viewing, searching, navigating, bookmarks, retrieving and displaying files, robustness, and gopher clients available via FTP (file transfer…

Damage reduction to ponderosa pine seedlings from northern pocket gophers by vegetation management through grass seeding and herbicide treatment

USGS Publications Warehouse

Engeman, Richard M.; Barnes, V.G.; Anthony, R.M.; Krupa, Heather W.

1998-01-01

2,4-D herbicide treatment was applied to 2 treatment units to remove the forbs that are the preferred food of pocket gophers. One of these units also was seeded with grasses prior to the 2,4-D treatment. The effect of 2,4-D and grass seeding plus 2,4-D treatments were compared to an untreated control unit. Long-term monitoring (7 yr) was conducted on the 3 units for vegetative cover (7 yr), pocket gopher activity, and individual survival times and time until gopher damage for 2 cohorts of seedlings (5 and 6 yrs). The 2,4-D treatments greatly reduced vegetative cover of the forbs and seeding increased grass cover on the unit receiving that treatment. Pocket gopher activity was reduced somewhat on the unit receiving only the 2,4-D treatment and more so on the unit receiving grass seeding and 2,4-D, although gophers remained active to some degree throughout the study. Both cohorts of seedlings for both treatments units showed greater average times until gopher damage over seedlings on the control unit. However, seedling survival from all sources of mortality was not positively affected by the treatments for the first cohort of seedlings. The 2,4-D treatment appeared to have killed some of the seedlings; however, seedlings that survived the treatment were in a situation where they were less likely to be damaged by gophers and seemed to have improved growth rates.

An Internet Gopher to Support Graduate Education and Professional Development for School Administrators.

ERIC Educational Resources Information Center

Gonzalez, Josue M.

1995-01-01

Describes the design and installation of an Internet gopher server to support classroom instruction and professional development projects in a graduate college of education. Topics include use by administrators, selecting the most appropriate technology, hardware and software selection, and informational resources of the gopher. (Author/LRW)

The University of Minnesota's Internet Gopher System: A Tool for Accessing Network-Based Electronic Information.

ERIC Educational Resources Information Center

Wiggins, Rich

1993-01-01

Describes the Gopher system developed at the University of Minnesota for accessing information on the Internet. Highlights include the need for navigation tools; Gopher clients; FTP (File Transfer Protocol); campuswide information systems; navigational enhancements; privacy and security issues; electronic publishing; multimedia; and future…

The dominance of introduced plant species in the diets of migratory Galapagos tortoises increases with elevation on a human-occupied island

USGS Publications Warehouse

Blake, Stephen; Guézou, Anne; Deem, Sharon L.; Yackulic, Charles B.; Cabrera, Fredy

2015-01-01

The distribution of resources and food selection are fundamental to the ecology, life history, physiology, population dynamics, and conservation of animals. Introduced plants are changing foraging dynamics of herbivores in many ecosystems often with unknown consequences. Galapagos tortoises, like many herbivores, undertake migrations along elevation gradients driven by variability in vegetation productivity which take them into upland areas dominated by introduced plants. We sought to characterize diet composition of two species of Galapagos tortoises, focussing on how the role of introduced forage species changes over space and the implications for tortoise conservation. We quantified the distribution of tortoises with elevation using GPS telemetry. Along the elevation gradient, we quantified the abundance of introduced and native plant species, estimated diet composition by recording foods consumed by tortoises, and assessed tortoise physical condition from body weights and blood parameter values. Tortoises ranged between 0 and 429 m in elevation over which they consumed at least 64 plant species from 26 families, 44 percent of which were introduced species. Cover of introduced species and the proportion of introduced species in tortoise diets increased with elevation. Introduced species were positively selected for by tortoises at all elevations. Tortoise physical condition was either consistent or increased with elevation at the least biologically productive season on Galapagos. Santa Cruz tortoises are generalist herbivores that have adapted their feeding behavior to consume many introduced plant species that has likely made a positive contribution to tortoise nutrition. Some transformed habitats that contain an abundance of introduced forage species are compatible with tortoise conservation.

Electronic Resources in Science and Technology: Gopher and Its Future.

ERIC Educational Resources Information Center

Weiner, Suzanne T., Ed.

1996-01-01

An Associate Head of Information Services and the Internet Gopher project leader discuss the future of Gopher with the arrival of the World Wide Web. Strengths and weaknesses of both systems are addressed. One expert sees a future with new versions of both; the other predicts a next generation of information systems combining their features. (PEN)

75 FR 19592 - Endangered and Threatened Wildlife and Plants; 12-Month Finding on a Petition to List the Wyoming...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-15

... size of individual pocket gophers and density of pocket gopher populations (Patton and Brylski 1987, p...-100). Pocket gopher population density is likely to be primarily regulated through intraspecific... the density of wells within that range (Keinath 2009, pp. 12-13). This potential risk is based on...

Plant succession on gopher mounds in Western Cascade meadows: consequences for species diversity and heterogeneity

Treesearch

Chad C. Jones; Charles B. Halpern; Jessica Niederer

2008-01-01

Pocket gophers have the potential to alter the dynamics of grasslands by creating mounds that bury existing vegetation and locally reset succession. Gopher mounds may provide safe sites for less competitive species, potentially increasing both species diversity and vegetation heterogeneity (spatial variation in species composition). We compared species composition,...

78 FR 54214 - Endangered and Threatened Wildlife and Plants; Removing Five Subspecies of Mazama Pocket Gopher...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-03

... section 3 of the Act, an endangered species is any species which is in danger of extinction throughout all... populations, do not occur elsewhere. Our Response: The presumption of extinction for the Tacoma pocket gopher... contrast to our presumption of extinction for the Tacoma pocket gopher, which is based on evidence from...

Effect of vegetation management for reducing damage to lodgepole pine seedlings from northern pocket gophers

USGS Publications Warehouse

Engeman, Richard M.; Barnes, Victor G.; Anthony, Richard M.; Krupa, Heather W.

1997-01-01

The effects of vegetation management on northern pocket gopher (Thomomys talpoides) activity and damage to lodgepole pine (Pinus contorta) seedlings were studied using 2,4-D herbicide to alter the habitat. Treatments were applied to a large (8.1 ha) treatment unit and observed effects were compared with an untreated control unit of the same size. The greatly reduced forb and grass cover on the treated unit was associated with a corresponding decrease in pocket gopher activity that persisted for 6 years after initial treatment. Times until seedlings first incurred gopher damage and overall survival of seedlings were greatly increased on the treated unit.

Problems with mitigation translocation of herpetofauna.

PubMed

Sullivan, Brian K; Nowak, Erika M; Kwiatkowski, Matthew A

2015-02-01

Mitigation translocation of nuisance animals is a commonly used management practice aimed at resolution of human-animal conflict by removal and release of an individual animal. Long considered a reasonable undertaking, especially by the general public, it is now known that translocated subjects are negatively affected by the practice. Mitigation translocation is typically undertaken with individual adult organisms and has a much lower success rate than the more widely practiced conservation translocation of threatened and endangered species. Nonetheless, the public and many conservation practitioners believe that because population-level conservation translocations have been successful that mitigation translocation can be satisfactorily applied to a wide variety of human-wildlife conflict situations. We reviewed mitigation translocations of reptiles, including our own work with 3 long-lived species (Gila monsters [Heloderma suspectum], Sonoran desert tortoises [Gopherus morafkai], and western diamond-backed rattlesnakes [Crotalus atrox]). Overall, mitigation translocation had a low success rate when judged either by effects on individuals (in all studies reviewed they exhibited increased movement or increased mortality) or by the success of the resolution of the human-animal conflict (translocated individuals often returned to the capture site). Careful planning and identification of knowledge gaps are critical to increasing success rates in mitigation translocations in the face of increasing pressure to find solutions for species threatened by diverse anthropogenic factors, including climate change and exurban and energy development. © 2014 Society for Conservation Biology.

Wildlife DNA forensics against crime: resolution of a case of tortoise theft.

PubMed

Mucci, Nadia; Mengoni, Chiara; Randi, Ettore

2014-01-01

A paternity test was used to investigate a robbery case involving captive individuals of Greek tortoise (Testudo graeca). Six tortoises were allegedly stolen from a private breeder and offered for sale on the web by the supposed thief. The stolen tortoises were confiscated by the rangers of the State Forestry Corps (CFS). A panel of 14 autosomal microsatellite loci was used to genotype the seized tortoises and ten individuals assumed to be legally owned by the breeder. Kinship analyses reliably reconstructed the tortoise pedigree, demonstrating parent-offspring relationships among the owned and the stolen tortoises. As correctly declared by the breeder, four of the six stolen individuals belonged to the same family group of the ten legally owned tortoises. Results indicate that genetic identification procedures can provide valuable evidence and give useful support against illegal wildlife traffic. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Endoscopically guided removal of cloacal calculi in three African spurred tortoises (Geochelone sulcata).

PubMed

Mans, Christoph; Sladky, Kurt K

2012-04-01

3 female African spurred tortoises (Geochelone sulcata) of various body weights (0.22, 0.77, and 2.86 kg [0.48, 1.69, and 6.29 lb]) were examined because of reduced food intake and lack of fecal output. Owners reported intermittent tenesmus in 2 of the tortoises. Physical examinations revealed no clinically important abnormalities in the tortoises. Cloacal calculi were diagnosed on the basis of radiography and cloacoscopy in all 3 tortoises. One tortoise had another calculus in the urinary bladder. Tortoises were anesthetized, and cloacal calculi were removed by use of a cutting burr (plain-fissure cutting burr and a soft tissue protector mounted to a dental handpiece that had a low-speed motor and a straight nose cone) and warm water irrigation with endoscopic guidance. Complete removal of calculus fragments was achieved by use of forceps and irrigation. In 1 tortoise, removal of the cloacal calculus was staged (2 separate procedures). In another tortoise, a second cloacal calculus (which had been located in the urinary bladder during the first examination) was successfully removed 25 days after removal of the first calculus. All 3 tortoises recovered uneventfully, and serious complications secondary to removal of the cloacal calculi were not detected. Cloacoscopy combined with the use of a low-speed dental drill and warm water irrigation should be considered a simple, safe, and nontraumatic treatment option for removal of obstructive cloacal calculi in tortoises.

Equivalency of Galápagos giant tortoises used as ecological replacement species to restore ecosystem functions.

PubMed

Hunter, Elizabeth A; Gibbs, James P; Cayot, Linda J; Tapia, Washington

2013-08-01

Loss of key plant-animal interactions (e.g., disturbance, seed dispersal, and herbivory) due to extinctions of large herbivores has diminished ecosystem functioning nearly worldwide. Mitigating for the ecological consequences of large herbivore losses through the use of ecological replacements to fill extinct species' niches and thereby replicate missing ecological functions has been proposed. It is unknown how different morphologically and ecologically a replacement can be from the extinct species and still provide similar functions. We studied niche equivalency between 2 phenotypes of Galápagos giant tortoises (domed and saddlebacked) that were translocated to Pinta Island in the Galápagos Archipelago as ecological replacements for the extinct saddlebacked giant tortoise (Chelonoidis abingdonii). Thirty-nine adult, nonreproductive tortoises were introduced to Pinta Island in May 2010, and we observed tortoise resource use in relation to phenotype during the first year following release. Domed tortoises settled in higher, moister elevations than saddlebacked tortoises, which favored lower elevation arid zones. The areas where the tortoises settled are consistent with the ecological conditions each phenotype occupies in its native range. Saddlebacked tortoises selected areas with high densities of the arboreal prickly pear cactus (Opuntia galapageia) and mostly foraged on the cactus, which likely relied on the extinct saddlebacked Pinta tortoise for seed dispersal. In contrast, domed tortoises did not select areas with cactus and therefore would not provide the same seed-dispersal functions for the cactus as the introduced or the original, now extinct, saddlebacked tortoises. Interchangeability of extant megaherbivores as replacements for extinct forms therefore should be scrutinized given the lack of equivalency we observed in closely related forms of giant tortoises. Our results also demonstrate the value of trial introductions of sterilized individuals to test niche equivalency among candidate analog species. © 2013 Society for Conservation Biology.

Status and distribution of the angonoka tortoise (Geochelone yniphora) of western Madagascar

USGS Publications Warehouse

Smith, Lora L.; Reid, Don; Robert, Bourou; Joby, Mahatoly; Clement, Sibo

1999-01-01

From 1993 to 1995, field surveys were conducted in western Madagascar to assess the current status of the angonoka tortoise (Geochelone yniphora) in the wild. Tortoise presence was documented at 10 of 11 localities surveyed. These localities represent at least five populations, all within a 30-km radius of Baly Bay, near the town of Soalala. The populations occur on fragments of habitat ranging from <50 to 4–6000 ha in size. One hundred and forty-five tortoises were marked in the five populations. Hatchling or juvenile tortoises were observed in all populations, indicating that reproduction was occurring. Most of the 145 tortoises (68%) were marked on Cape Sada, where monthly surveys were conducted. The tortoise density on the c. 150 ha peninsula was 0.66 tortoises/ha. The remains of 22 dead juveniles were found on Cape Sada over the 2-year period. This evidence, combined with the low number of juveniles in intermediate size classes in the Cape Sada population suggests that juvenile mortality may be high.

Digestive parameters and water turnover of the leopard tortoise.

PubMed

McMaster, Megan K; Downs, Colleen T

2008-09-01

Leopard tortoises (Stigmochelys pardalis) experience wide fluctuations in environmental conditions and unpredictable availability of food and water within the Nama-Karoo biome. It was hypothesised that tortoises fed two diets differing in preformed water and fibre content would have differing food intake, gut transit rate, assimilation efficiency, faecal and urinary water loss, and urine concentrations. It was predicted that tortoises fed these contrasting diets would attempt to maintain energy and water balance by altering their digestive parameters. Leopard tortoises fed lucerne (Medicago sativa) had a low food intake coupled with long gut transit times, which resulted in the lowest amount of faecal energy and faecal water lost. Tortoises fed tomatoes (Solanum lycopersicum) had higher food intake and faster gut transit times, but more energy and water was lost in the faeces. However, daily energy assimilated and assimilation efficiency were comparable between tortoises fed the two diets. Urine osmolality was significantly different between tortoises on the two diets. Results indicate that leopard tortoises can adjust parameters such as transit rate, food intake, water loss and urine osmolality to maintain body mass, water and energy balance in response to a high fibre, low water content and a low fibre, high water content diet. This study suggests that this digestive flexibility allows leopard tortoises in the wild to take advantage of unpredictable food and water resources.

Deep Drilling and Sampling via the Wireline Auto-Gopher Driven by Piezoelectric Percussive Actuator and EM Rotary Motor

NASA Technical Reports Server (NTRS)

Bar-Cohen, Yoseph; Badescu, Mircea; Sherrit, Stewart; Zacny, Kris; Paulsen, Gale L; Beegle, Luther; Bao, Xiaoqi

2012-01-01

The ability to penetrate subsurfaces and perform sample acquisition at depths of meters is critical for future NASA in-situ exploration missions to bodies in the solar system, including Mars and Europa. A corer/sampler was developed with the goal of acquiring pristine samples by reaching depths on Mars beyond the oxidized and sterilized zone. To developed rotary-hammering coring drill, called Auto-Gopher, employs a piezoelectric actuated percussive mechanism for breaking formations and an electric motor rotates the bit to remove the powdered cuttings. This sampler is a wireline mechanism that is incorporated with an inchworm mechanism allowing thru cyclic coring and core removal to reach great depths. The penetration rate is being optimized by simultaneously activating the percussive and rotary motions of the Auto-Gopher. The percussive mechanism is based on the Ultrasonic/Sonic Drill/Corer (USDC) mechanism that is driven by piezoelectric stack and that was demonstrated to require low axial preload. The Auto-Gopher has been produced taking into account the a lessons learned from the development of the Ultrasonic/Sonic Gopher that was designed as a percussive ice drill and was demonstrated in Antarctica in 2005 to reach about 2 meters deep. A field demonstration of the Auto-Gopher is currently being planned with objective of reaching as deep as 3 to 5 meters in tufa subsurface.

Detection of testudinid herpesvirus type 4 in a leopard tortoise (Stigmochelys pardalis).

PubMed

Kolesnik, Ekaterina; Mittenzwei, Frank; Marschang, Rachel E

2016-08-17

Several animals from a mixed species collection of tortoises in Germany died unexpectedly. Some of the affected leopard tortoises (Stigmochelys pardalis) from this group showed respiratory signs. Samples were collected from one of the ill tortoises, and a Mycoplasma spp. and a herpesvirus were detected by PCR. Sequencing of a portion of the DNA polymerase gene of the herpesvirus showed 99% identity with testudinid herpesvirus 4, previously described only once in a bowsprit tortoise (Chersina angulata) in the United States.

Assessing the potential to restore historic grazing ecosystems with tortoise ecological replacements.

PubMed

Griffiths, Christine J; Zuël, Nicolas; Jones, Carl G; Ahamud, Zairabee; Harris, Stephen

2013-08-01

The extinction of large herbivores, often keystone species, can dramatically modify plant communities and impose key biotic thresholds that may prevent an ecosystem returning to its previous state and threaten native biodiversity. A potentially innovative, yet controversial, landscape-based long-term restoration approach is to replace missing plant-herbivore interactions with non-native herbivores. Aldabran giant (Aldabrachelys gigantea) and Madagascan radiated (Astrochelys radiata) tortoises, taxonomically and functionally similar to the extinct Mauritian giant tortoises (Cylindraspis spp.), were introduced to Round Island, Mauritius, in 2007 to control the non-native plants that were threatening persistence of native species. We monitored the response of the plant community to tortoise grazing for 11 months in enclosures before the tortoises were released and, compared the cost of using tortoises as weeders with the cost of using manual labor. At the end of this period, plant biomass; vegetation height and cover; and adult, seedling, flower, and seed abundance were 3-136 times greater in adjacent control plots than in the tortoise enclosures. After their release, the free-roaming tortoises grazed on most non-native plants and significantly reduced vegetation cover, height, and seed production, reflecting findings from the enclosure study. The tortoises generally did not eat native species, although they consumed those native species that increased in abundance following the eradication of mammalian herbivores. Our results suggest that introduced non-native tortoises are a more cost-effective approach to control non-native vegetation than manual weeding. Numerous long-term outcomes (e.g., change in species composition and soil seed bank) are possible following tortoise releases. Monitoring and adaptive management are needed to ensure that the replacement herbivores promote the recovery of native plants. © 2013 Society for Conservation Biology.

Translocation as a conservation tool for Agassiz's desert tortoises: Survivorship, reproduction, and movements

Treesearch

K. E. Nussear; C. R. Tracy; P. A. Medica; D. S. Wilson; R. W. Marlow; P. S. Corn

2012-01-01

We translocated 120 Agassiz's desert tortoises to 5 sites in Nevada and Utah to evaluate the effects of translocation on tortoise survivorship, reproduction, and habitat use. Translocation sites included several elevations, and extended to sites with vegetation assemblages not typically associated with desert tortoises in order to explore the possibility of moving...

Auto-Gopher-II: an autonomous wireline rotary-hammer ultrasonic drill

NASA Astrophysics Data System (ADS)

Badescu, Mircea; Lee, Hyeong Jae; Sherrit, Stewart; Bao, Xiaoqi; Bar-Cohen, Yoseph; Jackson, Shannon; Chesin, Jacob; Zacny, Kris; Paulsen, Gale L.; Mellerowicz, Bolek; Kim, Daniel

2017-04-01

Developing technologies that would enable future NASA exploration missions to penetrate deeper into the subsurface of planetary bodies for sample collection is of great importance. Performing these tasks while using minimal mass/volume systems and with low energy consumption is another set of requirements imposed on such technologies. A deep drill, called Auto-Gopher II, is currently being developed as a joint effort between JPL's NDEAA laboratory and Honeybee Robotics Corp. The Auto-Gopher II is a wireline rotary-hammer drill that combines formation breaking by hammering using an ultrasonic actuator and cuttings removal by rotating a fluted auger bit. The hammering mechanism is based on the Ultrasonic/Sonic Drill/Corer (USDC) mechanism that has been developed as an adaptable tool for many drilling and coring applications. The USDC uses an intermediate free-flying mass to transform high frequency vibrations of a piezoelectric transducer horn tip into sonic hammering of the drill bit. The USDC concept was used in a previous task to develop an Ultrasonic/Sonic Ice Gopher and then integrated into a rotary hammer device to develop the Auto-Gopher-I. The lessons learned from these developments are being integrated into the development of the Auto- Gopher-II, an autonomous deep wireline drill with integrated cuttings and sample management and drive electronics. Subsystems of the wireline drill are being developed in parallel at JPL and Honeybee Robotics Ltd. This paper presents the development efforts of the piezoelectric actuator, cuttings removal and retention flutes and drive electronics.

Dominance and environmental correlates of alien annual plants in the Mojave Desert, USA

USGS Publications Warehouse

Brooks, M.L.; Berry, K.H.

2006-01-01

Land managers are concerned about the negative effects of alien annual plants on native plants, threatened and endangered species such as the desert tortoise (Gopherus agassizii), and ecosystem integrity in the Mojave Desert. Management of alien plants is hampered by a lack of information regarding the dominance and environmental correlates of these species. The results of this study indicate that alien plant species comprised a small fraction of the total annual plant flora, but most of the annual plant community biomass. When rainfall was high in 1995, aliens comprised 6% of the flora and 66% of the biomass. When rainfall was low in 1999, aliens comprised 27% of the flora and 91% of the biomass. Bromus rubens, Schismus spp. (S. arabicus and S. barbatus), and Erodium cicutarium were the predominant alien species during both years, comprising 99% of the alien biomass. B. rubens was more abundant in relatively mesic microhabitats beneath shrub canopies and at higher elevations above 800-1000 m, whereas Schismus spp. and E. cicutarium were more abundant in the relatively arid interspaces between shrubs, and, for Schismus spp., at lower elevations as well. Disturbance variables were more reliable indicators of alien dominance than were productivity or native plant diversity variables, although relationships often varied between years of contrasting rainfall. The strongest environmental correlates occurred between dirt road density and alien species richness and biomass of E. cicutarium, and between frequency and size of fires and biomass of B. rubens.

Thermoregulatory challenges in the habitat of the world's smallest tortoise, Chersobius signatus.

PubMed

Loehr, Victor J T

2018-01-01

Ectotherms have various means of dealing with low environmental temperatures, but relatively few species have been rigorously investigated. Consequently, we have little information to predict how ectotherm populations might respond to global temperature changes. Tortoises from temperate and subtropical regions often overcome periodically cool conditions by hibernation, but speckled dwarf tortoises (Chersobius signatus) need to remain active to exploit ephemeral resources in their arid winter-rainfall habitat. This study investigated how dwarf tortoises cope with low temperatures in winter and spring, by measuring thermal habitat quality and thermoregulation based on differently-sized operative temperature models in sun, shade, and in deep crevices. Investigations continued in summer and autumn to obtain a year-round picture of thermoregulatory challenges. Although large models (i.e., larger than dwarf tortoises) were expected to have lower operative temperatures than smaller models, due to the former's larger thermal inertia, all model sizes had similar temperatures. Hence, the species' small body size does not appear constrained by obtainable body temperatures in cool seasons. Nevertheless, low operative temperatures in winter posed a challenge for the tortoises, which reached their field-preferred body temperature for an average of only 0.8-0.9h per day. Moreover, a low thermoregulation effectiveness suggested that tortoises traded-off physiological benefits of favourable body temperatures against predation risk. Spring and autumn provided higher temperatures, but summer caused the greatest thermoregulatory challenge. Although summer body temperatures were closer to field-preferred body temperature than in any other season, tortoises required rock crevices to avoid overheating. The small size of dwarf tortoises might help them utilise crevices. In summer, maximum operative temperatures in crevices were similar to field-preferred body temperature, indicating that an increase in environmental temperatures might be detrimental to dwarf tortoises. In light of projected temperature rises, future studies should assess if dwarf tortoises can cope with higher environmental temperatures in summer. Copyright © 2017 Elsevier Ltd. All rights reserved.

Biochemistry and hematology parameters of the San Cristóbal Galápagos tortoise (Chelonoidis chathamensis)

PubMed Central

Griffioen, John A; Savo, Alison; Muñoz-Pérez, Juan Pablo; Ortega, Carlos; Loyola, Andrea; Roberts, Sarah; Schaaf, George; Steinberg, David; Osegueda, Steven B; Levy, Michael G; Páez-Rosas, Diego

2018-01-01

Abstract As part of a planned introduction of captive Galapagos tortoises (Chelonoidis chathamensis) to the San Cristóbal highland farms, our veterinary team performed thorough physical examinations and health assessments of 32 tortoises. Blood samples were collected for packed cell volume (PCV), total solids (TS), white blood cell count (WBC) differential, estimated WBC and a biochemistry panel including lactate. In some cases not all of the values were obtainable but most of the tortoises have full complements of results. Despite a small number of minor abnormalities this was a healthy group of mixed age and sex tortoises that had been maintained with appropriate husbandry. This work establishes part of a scientific and technical database to provide qualitative and quantitative information when establishing sustainable development strategies aimed at the conservation of Galapagos tortoises. PMID:29479431

Regenstrief Institute's Medical Gopher: a next-generation homegrown electronic medical record system.

PubMed

Duke, Jon D; Morea, Justin; Mamlin, Burke; Martin, Douglas K; Simonaitis, Linas; Takesue, Blaine Y; Dixon, Brian E; Dexter, Paul R

2014-03-01

Regenstrief Institute developed one of the seminal computerized order entry systems, the Medical Gopher, for implementation at Wishard Hospital nearly three decades ago. Wishard Hospital and Regenstrief remain committed to homegrown software development, and over the past 4 years we have fully rebuilt Gopher with an emphasis on usability, safety, leveraging open source technologies, and the advancement of biomedical informatics research. Our objective in this paper is to summarize the functionality of this new system and highlight its novel features. Applying a user-centered design process, the new Gopher was built upon a rich-internet application framework using an agile development process. The system incorporates order entry, clinical documentation, result viewing, decision support, and clinical workflow. We have customized its use for the outpatient, inpatient, and emergency department settings. The new Gopher is now in use by over 1100 users a day, including an average of 433 physicians caring for over 3600 patients daily. The system includes a wizard-like clinical workflow, dynamic multimedia alerts, and a familiar 'e-commerce'-based interface for order entry. Clinical documentation is enhanced by real-time natural language processing and data review is supported by a rapid chart search feature. As one of the few remaining academically developed order entry systems, the Gopher has been designed both to improve patient care and to support next-generation informatics research. It has achieved rapid adoption within our health system and suggests continued viability for homegrown systems in settings of close collaboration between developers and providers. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Rotary Percussive Auto-Gopher for Deep Drilling and Sampling

NASA Technical Reports Server (NTRS)

Bar-Cohen, Yoseph; Badescu, Mircea; Sherrit, Stewart

2009-01-01

The term "rotary percussive auto-gopher" denotes a proposed addition to a family of apparatuses, based on ultrasonic/ sonic drill corers (USDCs), that have been described in numerous previous NASA Tech Briefs articles. These apparatuses have been designed, variously, for boring into, and/or acquiring samples of, rock or other hard, brittle materials of geological interest. In the case of the rotary percussive autogopher, the emphasis would be on developing an apparatus capable of penetrating to, and acquiring samples at, depths that could otherwise be reached only by use of much longer, heavier, conventional drilling-and-sampling apparatuses. To recapitulate from the prior articles about USDCs: A USDC can be characterized as a lightweight, low-power jackhammer in which a piezoelectrically driven actuator generates ultrasonic vibrations and is coupled to a tool bit through a free mass. The bouncing of the free mass between the actuator horn and the drill bit converts the actuator ultrasonic vibrations into sonic hammering of the drill bit. The combination of ultrasonic and sonic vibrations gives rise to a hammering action (and a resulting chiseling action at the tip of the tool bit) that is more effective for drilling than is the microhammering action of ultrasonic vibrations alone. The hammering and chiseling actions are so effective that the size of the axial force needed to make the tool bit advance into soil, rock, or another material of interest is much smaller than in ordinary rotary drilling, ordinary hammering, or ordinary steady pushing. The predecessor of the rotary percussive auto-gopher is an apparatus, now denoted an ultrasonic/sonic gopher and previously denoted an ultrasonic gopher, described in "Ultrasonic/ Sonic Mechanism for Drilling and Coring" (NPO-30291), NASA Tech Briefs Vol. 27, No. 9 (September 2003), page 65. The ultrasonic/sonic gopher is intended for use mainly in acquiring cores. The name of the apparatus reflects the fact that, like a gopher, it periodically stops advancing at the end of the hole to bring excavated material (in this case, a core sample) to the surface, then re-enters the hole to resume the advance of the end of the hole. By use of a cable suspended from a reel on the surface, the gopher is lifted from the hole to remove a core sample, then lowered into the hole to resume the advance and acquire the next core sample.

Infestation of the spur-thighed tortoise (Testudo graeca) by Hyalomma aegyptium in Tunisia.

PubMed

Gharbi, Mohamed; Rjeibi, Mohamed Ridha; Rouatbi, Mariem; Mabrouk, Moez; Mhadhbi, Moez; Amairia, Safa; Amdouni, Yosra; Boussaadoun, Mohamed Anis

2015-04-01

We examined 210 spur-thighed tortoises (Testudo graeca) for the presence of ticks in Tunisia during May 2014. A total number of 602 adult ticks were collected and identified leading to the estimation of parasitological indicators. All the ticks belonged to a single species: Hyalomma aegyptium. The mean infestation prevalence was 66.2%, mean overall infestation intensity and abundance were 4.33 and 2.86 ticks/tortoise respectively. Our survey showed that tortoises were significantly more infested by male ticks than females (p<0.001). The ticks were mainly present in the posterior limbs compared to other body regions (p<0.05). There was no significance variation of length and weight of tortoises according to sex (p<0.05). There was a significant correlation between the tortoises' size (length and weight) and tick infestation. This study showed high tick burdens of spur-thighed tortoises in Tunisia; further investigations are needed to determine exactly the role of this tick species in the transmission of different zoonotic pathogens. Copyright © 2015 Elsevier GmbH. All rights reserved.

The Auto-Gopher: A Wireline Rotary-Percussive Deep Sampler

NASA Technical Reports Server (NTRS)

Bar-Cohen, Yoseph; Zacny, Kris; Badescu, Mircea; Lee, Hyeong Jae; Sherrit, Stewart; Bao, Xiaoqi; Paulsen, Gale L.; Beegle, Luther

2016-01-01

Accessing regions on planetary bodies that potentially preserved biosignatures or are presently habitable is vital to meeting NASA solar system "Search for Life" exploration objectives. To address these objectives, a wireline deep rotary-percussive corer called Auto-Gopher was developed. The percussive action provides effective material fracturing and the rotation provides effective cuttings removal. To increase the drill's penetration rate, the percussive and rotary motions are operated simultaneously. Initially, the corer was designed as a percussive mechanism for sampling ice and was demonstrated in 2005 in Antarctica reaching about 2 m deep. The lessons learned suggested the need to use a combination of rotation and hammering to maximize the penetration rate. This lesson was implemented into the Auto-Gopher-I deep drill which was demonstrated to reach 3-meter deep in gypsum. The average drilling power that was used has been in the range of 100-150 Watt, while the penetration rate was approximately 2.4 m/hr. Recently, a task has started with the goal to develop Auto-Gopher-II that is equipped to execute all the necessary functions in a single drilling unit. These functions also include core breaking, retention and ejection in addition drilling. In this manuscript, the Auto-Gopher-II, its predecessors and their capability are described and discussed.

A Field Portable Hyperspectral Goniometer for Coastal Characterization

NASA Technical Reports Server (NTRS)

Bachmann, Charles M.; Gray, Deric; Abelev, Andrei; Philpot, William; Fusina, Robert A.; Musser, Joseph A.; Vermillion, Michael; Doctor, Katarina; White, Maurice; Georgiev, Georgi

2012-01-01

During an airborne multi-sensor remote sensing experiment at the Virginia Coast Reserve (VCR) Long Term Ecological Research (LTER) site in June 2011 (VCR '11), first measurements were taken with the new NRL Goniometer for Outdoor Portable Hyperspectral Earth Reflectance (GOPHER). GOPHER measures the angular distribution of hyperspectral reflectance. GOPHER was constructed for NRL by Spectra Vista Corporation (SVC) and the University of Lethbridge through a capital equipment purchase in 2010. The GOPHER spectrometer is an SVC HR -1024, which measures hyperspectral reflectance over the range from 350 -2500 nm, the visible, near infrared, and short-wave infrared. During measurements, the spectrometer travels along a zenith quarter -arc track that can rotate in azimuth, allowing for measurement of the bi-directional reflectance distribution function (BRDF) over the whole hemisphere. The zenith arc has a radius of approximately 2m, and the spectrometer scan pattern can be programmed on the fly during calibration and validation efforts. The spectrometer and zenith arc assembly can be raised and lowered along a mast to allow for measurement of uneven terrain or vegetation canopies of moderate height. Hydraulics on the chassis allow for leveling of the instrument in the field. At just over 400 lbs, GOPHER is a field portable instrument and can be transformed into a compact trailer assembly for movement over long distances in the field.

The heat is on: Desert tortoises and survival

USGS Publications Warehouse

Wessells, Stephen M.; Schwarzbach, Steven E.

2010-01-01

Purpose: To highlight USGS scientists' research and build support for the work being done to help with desert tortoise recovery. To educate people about desert tortoises, their habitat needs, and what people might do to help. Length: 30 minutes

Auto-Gopher: A Wire-Line Rotary-Hammer Ultrasonic Drill

NASA Technical Reports Server (NTRS)

Badescu, Mircea; Sherrit, Stewart; Bao, Xiaogi; Bar-Cohen, Yoseph; Chen, Beck

2011-01-01

Developing technologies that would enable NASA to sample rock, soil, and ice by coring, drilling or abrading at a significant depth is of great importance for a large number of in-situ exploration missions as well as for earth applications. Proven techniques to sample Mars subsurface will be critical for future NASA astrobiology missions that will search for records of past and present life on the planet, as well as, the search for water and other resources. A deep corer, called Auto-Gopher, is currently being developed as a joint effort of the JPL's NDEAA laboratory and Honeybee Robotics Corp. The Auto-Gopher is a wire-line rotary-hammer drill that combines rock breaking by hammering using an ultrasonic actuator and cuttings removal by rotating a fluted bit. The hammering mechanism is based on the Ultrasonic/Sonic Drill/Corer (USDC) that has been developed as an adaptable tool for many of drilling and coring applications. The USDC uses an intermediate free-flying mass to transform the high frequency vibrations of the horn tip into a sonic hammering of a drill bit. The USDC concept was used in a previous task to develop an Ultrasonic/Sonic Ice Gopher. The lessons learned from testing the ice gopher were implemented into the design of the Auto-Gopher by inducing a rotary motion onto the fluted coring bit. A wire-line version of such a system would allow penetration of significant depth without a large increase in mass. A laboratory version of the corer was developed in the NDEAA lab to determine the design and drive parameters of the integrated system. The design configuration lab version of the design and fabrication and preliminary testing results are presented in this paper

Demographic outcomes and ecosystem implications of giant tortoise reintroduction to Española Island, Galapagos.

PubMed

Gibbs, James P; Hunter, Elizabeth A; Shoemaker, Kevin T; Tapia, Washington H; Cayot, Linda J

2014-01-01

Restoration of extirpated species via captive breeding has typically relied on population viability as the primary criterion for evaluating success. This criterion is inadequate when species reintroduction is undertaken to restore ecological functions and interactions. Herein we report on the demographic and ecological outcomes of a five-decade-long population restoration program for a critically endangered species of "ecosystem engineer": the endemic Española giant Galapagos tortoise (Chelonoidis hoodensis). Our analysis of complementary datasets on tortoise demography and movement, tortoise-plant interactions and Española Island's vegetation history indicated that the repatriated tortoise population is secure from a strictly demographic perspective: about half of tortoises released on the island since 1975 were still alive in 2007, in situ reproduction is now significant, and future extinction risk is low with or without continued repatriation. Declining survival rates, somatic growth rates, and body condition of repatriates suggests, however, that resources for continued population growth are increasingly limited. Soil stable carbon isotope analyses indicated a pronounced shift toward woody plants in the recent history of the island's plant community, likely a legacy of changes in competitive relations between woody and herbaceous plants induced by now-eradicated feral goats and prolonged absence of tortoises. Woody plants are of concern because they block tortoise movement and hinder recruitment of cactus--a critical resource for tortoises. Tortoises restrict themselves to remnant cactus patches and areas of low woody plant density in the center of the island despite an apparent capacity to colonize a far greater range, likely because of a lack of cactus elsewhere on the island. We conclude that ecosystem-level criteria for success of species reintroduction efforts take much longer to achieve than population-level criteria; moreover, reinstatement of endangered species as fully functioning ecosystem engineers may often require large-scale habitat restoration efforts in concert with population restoration.

Inferring social structure and its drivers from refuge use in the desert tortoise, a relatively solitary species

USGS Publications Warehouse

Sah, Pratha; Nussear, Kenneth E.; Esque, Todd C.; Aiello, Christina M.; Hudson, Peter J.; Bansal, Shweta

2016-01-01

For several species, refuges (such as burrows, dens, roosts, nests) are an essential resource for protection from predators and extreme environmental conditions. Refuges also serve as focal sites for social interactions, including mating, courtship, and aggression. Knowledge of refuge use patterns can therefore provide information about social structure, mating, and foraging success, as well as the robustness and health of wildlife populations, especially for species considered to be relatively solitary. In this study, we construct networks of burrow use to infer social associations in a threatened wildlife species typically considered solitary—the desert tortoise. We show that tortoise social networks are significantly different than null networks of random associations, and have moderate spatial constraints. We next use statistical models to identify major mechanisms behind individual-level variation in tortoise burrow use, popularity of burrows in desert tortoise habitat, and test for stressor-driven changes in refuge use patterns. We show that seasonal variation has a strong impact on tortoise burrow switching behavior. On the other hand, burrow age and topographical condition influence the number of tortoises visiting a burrow in desert tortoise habitat. Of three major population stressors affecting this species (translocation, drought, disease), translocation alters tortoise burrow switching behavior, with translocated animals visiting fewer unique burrows than residents. In a species that is not social, our study highlights the importance of leveraging refuge use behavior to study the presence of and mechanisms behind non-random social structure and individual-level variation. Our analysis of the impact of stressors on refuge-based social structure further emphasizes the potential of this method to detect environmental or anthropogenic disturbances.

Patterns of activity and body temperature of Aldabra giant tortoises in relation to environmental temperature.

PubMed

Falcón, Wilfredo; Baxter, Rich P; Furrer, Samuel; Bauert, Martin; Hatt, Jean-Michel; Schaepman-Strub, Gabriela; Ozgul, Arpat; Bunbury, Nancy; Clauss, Marcus; Hansen, Dennis M

2018-02-01

We studied the temperature relations of wild and zoo Aldabra giant tortoises ( Aldabrachelys gigantea ) focusing on (1) the relationship between environmental temperature and tortoise activity patterns ( n  = 8 wild individuals) and (2) on tortoise body temperature fluctuations, including how their core and external body temperatures vary in relation to different environmental temperature ranges (seasons; n  = 4 wild and n  = 5 zoo individuals). In addition, we surveyed the literature to review the effect of body mass on core body temperature range in relation to environmental temperature in the Testudinidae. Diurnal activity of tortoises was bimodally distributed and influenced by environmental temperature and season. The mean air temperature at which activity is maximized was 27.9°C, with a range of 25.8-31.7°C. Furthermore, air temperature explained changes in the core body temperature better than did mass, and only during the coldest trial, did tortoises with higher mass show more stable temperatures. Our results, together with the overall Testudinidae overview, suggest that, once variation in environmental temperature has been taken into account, there is little effect of mass on the temperature stability of tortoises. Moreover, the presence of thermal inertia in an individual tortoise depends on the environmental temperatures, and we found no evidence for inertial homeothermy. Finally, patterns of core and external body temperatures in comparison with environmental temperatures suggest that Aldabra giant tortoises act as mixed conformer-regulators. Our study provides a baseline to manage the thermal environment of wild and rewilded populations of an important island ecosystem engineer species in an era of climate change.

Reassignment of the land tortoise haemogregarine Haemogregarina fitzsimonsi Dias 1953 (Adeleorina: Haemogregarinidae) to the genus Hepatozoon Miller 1908 (Adeleorina: Hepatozoidae) based on parasite morphology, life cycle and phylogenetic analysis of 18S rDNA sequence fragments.

PubMed

Cook, Courtney A; Lawton, Scott P; Davies, Angela J; Smit, Nico J

2014-06-13

SUMMARY Research was undertaken to clarify the true taxonomic position of the terrestrial tortoise apicomplexan, Haemogregarina fitzsimonsi (Dias, 1953). Thin blood films were screened from 275 wild and captive South African tortoises of 6 genera and 10 species between 2009-2011. Apicomplexan parasites within films were identified, with a focus on H. fitzsimonsi. Ticks from wild tortoises, especially Amblyomma sylvaticum and Amblyomma marmoreum were also screened, and sporogonic stages were identified on dissection of adult ticks of both species taken from H. fitzsimonsi infected and apparently non-infected tortoises. Parasite DNA was extracted from fixed, Giemsa-stained tortoise blood films and from both fresh and fixed ticks, and PCR was undertaken with two primer sets, HEMO1/HEMO2, and HepF300/HepR900, to amplify parasite 18S rDNA. Results indicated that apicomplexan DNA extracted from tortoise blood films and both species of tick had been amplified by one or both primer sets. Haemogregarina  fitzsimonsi 18S rDNA sequences from tortoise blood aligned with those of species of Hepatozoon, rather than those of species of Haemogregarina or Hemolivia. It is recommended therefore that this haemogregarine be re-assigned to the genus Hepatozoon, making Hepatozoon fitzsimonsi (Dias, 1953) the only Hepatozoon known currently from any terrestrial chelonian. Ticks are its likely vectors.

Population dynamics and bioenergetics of a fossorial herbivore, Thomomys talpoides (Rodentia: Geomyidae), in a spruce-fir sere

USGS Publications Warehouse

Andersen, Douglas C.; MacMahon, James A.

1981-01-01

Studies of the bioenergetics of the northern pocket gopher, Thomomys talpoides, are coupled with data on demography, activity budgets, and microclimates to model the energy requirements of individuals and populations in the Wasatch Mountains of Utah during 1976-1979. Metabolic rates during rest increased linearly with decreasing ambient temperature, but burrowing metabolic rates (16.3 mL O2 • h-1 • g-9.75) were independent of both temperature and physical properties of the soil. Radio-telemetry studies indicated that free-ranging gophers are active =50% of each day. Conservative estimates of true energy consumption were calculated using estimates of habitat-specific minimum daily burrowing requirements. Rates of burrowing measured in the laboratory were either ∞ 0.0 or ∞ 2.0 cm/min. The low burrowing rate was observed when the soil was frozen or saturated with water, as would occur in the field in early winter and in spring, respectively. Gophers burrowed through soil at the study site at an average rate of ∞ 1.5 cm/min. Belowground food energy densities at gopher foraging depth declined from 24.6 to 3.2 J/cm3 along a successional gradient (subalpine forb meadow to Engelmann spruce dominated forest). We conclude that individual gophers are food limited within the climax spruce seral stage. Further, daily energy costs associated with reproduction in females may exceed the belowground energy supply available in intermediate seral stages (aspen and subalpine fir). Reduction of burrowing rates for any reason will affect gophers in the late seral stages proportionately more than those resident in the meadow. The peak gopher densities recorded (from 62 individuals/ha in the meadow to 2 individuals/ha in spruce forest) support these inferences. Detailed demographic information was obtained only in the meadow seral stage. Adult survivorship was lower in winter than in summer and varied greatly between years (0.18-0.70 yr-1). Juvenile survivorship from weaning through the first year was comparable to adult annual rates. The fertility rate was 3.75 young • female-1 • yr-1. The energy supply and demand analyses indicate that the growth of Thomomys talpoides populations in the early seral stages is seldom directly limited by the amount of food present. From our demographic, environmental, and autecological studies we conclude that stochastic events associated with weather affect energy acquisition (burrowing) rates, and thus survivorship. In montane environments, such events may prevent populations from attaining sizes at which territorial behavior would hypothetically limit further increases. The energy flow through the meadow population at moderate to high )1976-1977) densities (at least 1100 MJ • ha-1 • yr-1) indicates that pocket gophers are proficient energy movers relative to non-fossorial small mammals. Subalpine T. talpoides populations appear commonly to attain such densities. More than 30% of the annual primary productivity allocated to belowground parts of meadow forbs may be consumed by gophers.

The Desert Tortoise: A Delicate Balance

NASA Technical Reports Server (NTRS)

1992-01-01

This award winning program looks at the efforts to preserve the desert tortoise in and around the Edwards Air Force Base, CA area. It also explains what people should do if they come in contact with a tortoise. This video was produced in cooperation with Edwards Air Force Base.

Insights into the Introduction History and Population Genetic Dynamics of the Nile Monitor (Varanus niloticus) in Florida

PubMed Central

Dowell, Stephanie A.; Campbell, Todd S.

2016-01-01

Invasive species are widely recognized as important drivers of the ongoing biodiversity crisis. The US state of Florida is especially susceptible to the proliferation of invasive reptiles, and nonnative lizards currently outnumber native lizard species. At present, there are 3 documented breeding populations of the Nile monitor (Varanus niloticus) in different regions of Southern Florida, and these populations are considered potential dangers to threatened, fossorial endemics, such as burrowing owls, American crocodiles, and gopher tortoises. Nevertheless, at present, both the introduction histories of these populations and the degree to which they are connected by gene flow are not known. To address these issues, we genotyped V. niloticus from Cape Coral, Homestead Air Reserve Base, and West Palm Beach at 17 microsatellite loci and conducted a variety of analyses to assess both intrapopulation genetic diversity, the degree of gene flow between populations, and the most likely introduction scenario. The results of our analyses demonstrate that all 3 populations have limited genetic diversity (mean number of effective alleles across loci in all 3 populations ~ 2.00) and are highly differentiated from one another (G ST = 0.268; G″ST = 0.628). Our results also suggest that these populations resulted from independent introduction events that occurred within the past few decades. Consequently, we advise that wildlife managers focus management efforts on containment of existing populations and intensification of monitoring efforts on potential migration corridors. PMID:26971010

Applications of Gopher Information Systems for Composition Classes and Programs.

ERIC Educational Resources Information Center

Clark, John M.

Despite accompanying drawbacks, the Internet information system known as Gopher presents a rich variety of potential benefits to writing pedagogies and to educational administrators. Writing teachers need to overcome tendencies to think of exploration of the Internet information resources as something to be uncritically adopted and as something to…

Effectiveness of post-fire seeding in desert tortoise Critical Habitat following the 2005 Southern Nevada Fire Complex

USGS Publications Warehouse

DeFalco, Lesley; Drake, Karla K.; Scoles-Sciulla, S. J.; Bauer, Kyla L.

2010-01-01

In June 2005, lightning strikes ignited multiple wildfires in southern Nevada. The Southern Nevada Fire Complex burned more than 32,000 acres of designated desert tortoise Critical Habitat and an additional 403,000 acres of Mojave Desert habitat characterized as potentially suitable for the tortoise. Mortalities of desert tortoises were observed after the fires, but altered habitat is likely to prolong and magnify the impacts of wildfire on desert tortoise populations. To accelerate the re-establishment of plants commonly used by tortoises for food and shelter, the Bureau of Land Management (BLM) distributed seeds of native annual and perennial species in burned areas within desert tortoise Critical Habitat. The U.S. Geological Survey (USGS) established monitoring plots to evaluate broadcast seeding as a means to restore habitat and tortoise activity compared with natural recovery. Within the standard three-year Emergency and Stabilization Response (ESR) monitoring timeline, seeding augmented perennial seed banks by four to six-fold within a year of seed applications compared with unseeded areas. By the end of the three-year monitoring period, seedling densities of seeded perennial species were 33% higher in seeded areas than in unseeded areas, particularly for the disturbance-adapted desert globemallow (Sphaeralcea ambigua) and desert marigold (Baileya multiradiata). Seeded annuals, in contrast, did not increase significantly in seed banks or biomass production, likely due to low seeding rates of these species. Production of non-native annuals that helped carry the fires was not reduced by seeding efforts but instead was strongly correlated with site-specific rainfall, as were native annual species. The short-term vegetation changes measured in seeded areas were not yet associated with a return of tortoise activity to unburned levels. By focusing on a combination of native species that can withstand disturbance conditions, including species that are found in adjacent unburned areas, and increasing seeding rates, broadcast seeding has strong potential to provide herbaceous plants for forage and long-term perennial plant cover to support tortoise recovery in burned habitats.

Occurrence of health-compromising protozoan and helminth infections in tortoises kept as pet animals in Germany.

PubMed

Hallinger, Malek J; Taubert, Anja; Hermosilla, Carlos; Mutschmann, Frank

2018-06-18

Exotic reptiles such as tortoises, have become increasingly common domestic pets worldwide and are known to host different gastrointestinal parasites. Some of these parasites bear zoonotic potential. In the present survey, we parasitologically examined tortoise faecal samples (n = 1005) from 19 different species held as pets in private German households and German zoological gardens. Saline faecal smears were used to generate prevalence data for potentially health-compromising gastrointestinal parasites. In addition, we performed complete parasitological dissections of dead tortoises (n = 49) to estimate endoparasite burdens precisely. Analysed tortoise faecal samples contained a broad spectrum of endoparasites. We detected ten taxa of endoparasites; oxyurid nematodes (e.g. Tachygonetria spp.) were the most prevalent parasites in faecal samples (43.18%), followed by ascarids (Angusticaecum spp.) (0.01%), Hexamita spp. (0.007%), Balantidium spp. (0.007%), trichomonads (0.004%), Strongyloides spp. (0.003%), Entamoeba spp. (0.005%), Hartmanella spp. (0.001%), Blastocystis spp. (0.002%), heterakids (0.001%) and Trimitus spp. (0.001%). Additionally, we investigated dead tortoise individuals (n = 49; of 10 different species) for aetiological diagnosis and estimation of endoparasite burden. Of these individuals, 38 (77.6%) were infected with parasites and 14 (28.6%) of them died most probably due to severe parasitic infection. Oxyurid infections correlated positively with calcium deficiency and metabolic bone disease (MBD) as well as nephrosis/nephritis, mainly occurring in juvenile tortoises (< 5 years of age). The saline faecal smear technique proved to be efficient in detecting different metazoan and protozoan parasite stages in tortoise faeces. The prevalence of oxyurid infections was particularly high. In combination with pathological findings in clinical oxyuridosis obtained from necropsied animals, our findings call for further, detailed investigations on pathogenesis and immunology of oxyurids in pet reptiles. Coprological analyses for parasite detection should be mandatory before tortoises are transferred to a new owner, animal group, or public and private enclosures such as zoos. We advocate for regular health screenings in pet tortoises and, if parasitic infections are diagnosed, adequate medication or alternative hygiene management should be considered to improve and maintain individual and population health.

Reducing predation by common ravens on desert tortoises in the Mojave and Colorado Deserts

USGS Publications Warehouse

Boarman, William I.

2002-01-01

intended to provide a basis for a long-term reduction in raven impacts. The recommendations fall into four basic categories. (1) Modify anthropogenic sources of food, water, and nesting substrates to reduce their use by ravens. This includes modifying landfill operations, septage containment practices, livestock management, and other commercial and private practices that help facilitate raven survival and dispersal by providing food and water. Most of these measures are long-term actions deigned to reduce the carrying capacity of the desert for ravens. This action is critical and must be done over very large areas. (2)Lethal removal of ravens by shooting or euthanizing following live trapping. Specific ravens known to prey on tortoises would be targeted as well as all ravens found foraging within specific high-priority desert tortoise management zones (e.g., Desert Tortoise Natural Areas, DTNA). These actions would primarily be deployed on a short-term emergency basis to give specific tortoise populations a necessary boost until other measures become fully implemented and achieve their goals. (3) Conduct research on raven ecology, raven behavior, and methods to reduce raven predation on tortoises. Results of these studies would be used to design future phases of the raven management program. (4) All actions should be approached within an adaptive management framework. As such monitor, actions should be designed as experiments so that monitoring of actions will yield reliable and scientifically sound results. Coordinating and oversight teams should be convened to facilitate cooperation and coordination among agencies and to ensure that the actions are being implemented effectively. Recommendations made herein were developed to help recover tortoise populations by reducing raven predation on juvenile tortoises. If the recommendations made are implemented in concert with actions reducing other causes of mortality, ill health, and lowered reproductive output, they should aid in the long-term recovery of desert tortoise populations. Many important aspects of raven population dynamics, raven predation on tortoises, and how to manage raven populations and behavior are as yet unknown. Because of this, any raven management program must be implemented within an adaptive management framework. Doing so would allow for sufficient flexibility to modify the program as new information is gained.

Ecological Monitoring and Compliance Program 2014 Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, Derek B.; Anderson, David C.; Greger, Paul D.

The Ecological Monitoring and Compliance Program (EMAC), funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Field Office (NNSA/NFO, formerly Nevada Site Office), monitors the ecosystem of the Nevada National Security Site (NNSS) and ensures compliance with laws and regulations pertaining to NNSS biota. This report summarizes the program’s activities conducted by National Security Technologies, LLC (NSTec), during calendar year 2014. Program activities included (a) biological surveys at proposed activity sites, (b) desert tortoise compliance, (c) ecosystem monitoring, (d) sensitive plant species monitoring, (e) sensitive and protected/regulated animal monitoring, and (f) habitat restoration monitoring. During 2014, allmore » applicable laws, regulations, and permit requirements were met, enabling EMAC to achieve its intended goals and objectives. Sensitive and protected/regulated species of the NNSS include 42 plants, 1 mollusk, 2 reptiles, 236 birds, and 27 mammals. These species are protected, regulated, or considered sensitive according to state or federal regulations and natural resource agencies and organizations. The desert tortoise (Gopherus agassizii) and the western yellow-billed cuckoo (Coccyzus americanus) are the only species on the NNSS protected under the Endangered Species Act, both listed as threatened. However, only one record of the cuckoo has ever been documented on the NNSS, and there is no good habitat for this species on the NNSS. It is considered a rare migrant. Biological surveys for the presence of sensitive and protected/regulated species and important biological resources on which they depend were conducted for 18 projects. A total of 199.18 hectares (ha) was surveyed for these projects. Sensitive and protected/regulated species and important biological resources found during these surveys included a predator burrow, one sidewinder rattlesnake (Crotalus cerastes), two mating speckled rattlesnakes (Crotalus mitchellii), and several species of cacti. NSTec provided to project managers a written summary report of all survey findings and mitigation recommendations, where applicable. Of the 18 projects on the NNSS, 15 occurred within the range of the threatened desert tortoise. Approximately 2.19 ha of desert tortoise habitat were disturbed. No desert tortoises were accidentally injured or killed by project activities, and no tortoises were killed by vehicles. On 13 occasions, tortoises were moved off the road and out of harm’s way. Six tortoises were found and transmitters attached as part of an approved study to assess impacts of vehicles on tortoises on the NNSS. NSTec biologists continued to monitor 37 juvenile desert tortoises as part of a collaborative effort to study survival and temperament of translocated animals. From 1978 until 2013, there has been an average of 11.2 wildland fires per year on the NNSS with an average of about 83.7 ha burned per fire. There were no wildland fires documented on the NNSS during 2014. Results from the wildland fuel surveys showed a very low risk of wildland fire due to reduced fuel loads caused by limited natural precipitation. Limited reptile trapping and reptile roadkill surveys were conducted to better define species distribution on the NNSS. Sixteen reptiles were trapped representing five species. Combined with data from 2013, 183 road kills were detected, representing 11 snake and 8 lizard species. Selected natural water sources were monitored to assess trends in physical and biological parameters, and one new water source was found. Wildlife use at five water troughs and four radiologically contaminated sumps was documented using motion-activated cameras. As part of the statewide effort to disseminate information throughout the botanical community, NSTec prepared a shape file with site-specific data for all 17 sensitive plants on the NNSS and provided it to the Nevada Natural Heritage Program for inclusion in their statewide database. No field surveys were conducted this year for sensitive plants on the NNSS due to poor growing conditions. Surveys of sensitive and protected/regulated animals during 2014 focused on winter raptors, bats, wild horses (Equus caballus), mule deer (Odocoileus hemionus), desert bighorn sheep (Ovis Canadensis nelsoni), and mountain lions (Puma concolor). Two permanent, long-term winter raptor survey routes were established and sampled in January and February. A total of 27 raptors representing 4 species were observed. The wild horse population increased from 30 to 41, with several yearlings recruiting into the population, possibly due to the death of a mountain lion known to prey on horse foals. Mule deer abundance and density measured with standardized deer surveys was similar to 2013 and appears to be stable. Desert bighorn sheep, including rams, ewes, and lambs, were detected using motion-activated cameras at four water sources. There are plans to conduct helicopter surveys to census the population during September 2015 and then capture and radio-collar up to 20 sheep during November 2015. Over 150 sheep scat samples have been collected for genetic analysis to try to determine how sheep on the NNSS are related to surrounding sheep populations. Information is presented about bird mortalities, Migratory Bird Treaty Act compliance, and a summary of nuisance animals and their control on the NNSS. A total of 93 mountain lion images (i.e., photographs or video clips) were taken during 220,379 camera hours at 16 of 32 sites sampled and another 11,946 images of at least 29 species other than mountain lions were taken as well. A mountain lion telemetry study continued in 2014. NNSS7 was tracked from January 1 to November 15 using a global positioning system satellite transmitter. He consumed 21 mule deer, 17 desert bighorn sheep, 1 juvenile bobcat, and 3 coyotes. Mule deer were primarily taken in the summer and fall. No new mountain lions were captured. A minimum of four adult lions (two males, two females), a subadult male, and three kittens were known to inhabit the NNSS during 2014. Two previously revegetated sites on the NNSS and one on the Tonopah Test Range (TTR) were monitored in 2014. The cover cap on the U-3ax/bl disposal unit, revegetated in 2000, and the 92-Acre Site at the Area 5 Radioactive Waste Management Complex, revegetated in 2011, were the restoration sites monitored on the NNSS. The Corrective Action Unit 407 Rollercoaster RADSAFE site, revegetated in 2000, was the restoration site monitored on the TTR. Plant cover and density were recorded at all sites except U-3ax/bl (qualitative monitoring), and reclamation success standards were evaluated, where applicable.« less

78 FR 34635 - Notice of Request for Extension of Approval of an Information Collection; Interstate Movement of...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-10

... Collection; Interstate Movement of Certain Land Tortoises AGENCY: Animal and Plant Health Inspection Service... with regulations for the interstate movement of certain land tortoises. DATES: We will consider all... regulations for the interstate movement of certain land tortoises, contact Dr. Christa Speekmann, Import...

Localizing Tortoise Nests by Neural Networks.

PubMed

Barbuti, Roberto; Chessa, Stefano; Micheli, Alessio; Pucci, Rita

2016-01-01

The goal of this research is to recognize the nest digging activity of tortoises using a device mounted atop the tortoise carapace. The device classifies tortoise movements in order to discriminate between nest digging, and non-digging activity (specifically walking and eating). Accelerometer data was collected from devices attached to the carapace of a number of tortoises during their two-month nesting period. Our system uses an accelerometer and an activity recognition system (ARS) which is modularly structured using an artificial neural network and an output filter. For the purpose of experiment and comparison, and with the aim of minimizing the computational cost, the artificial neural network has been modelled according to three different architectures based on the input delay neural network (IDNN). We show that the ARS can achieve very high accuracy on segments of data sequences, with an extremely small neural network that can be embedded in programmable low power devices. Given that digging is typically a long activity (up to two hours), the application of ARS on data segments can be repeated over time to set up a reliable and efficient system, called Tortoise@, for digging activity recognition.

Assessing models of speciation under different biogeographic scenarios; An empirical study using multi-locus and RNA-seq analyses

USGS Publications Warehouse

Edwards, Taylor; Tollis, Marc; Hsieh, PingHsun; Gutenkunst, Ryan N.; Liu, Zhen; Kusumi, Kenro; Culver, Melanie; Murphy, Robert W.

2016-01-01

Evolutionary biology often seeks to decipher the drivers of speciation, and much debate persists over the relative importance of isolation and gene flow in the formation of new species. Genetic studies of closely related species can assess if gene flow was present during speciation, because signatures of past introgression often persist in the genome. We test hypotheses on which mechanisms of speciation drove diversity among three distinct lineages of desert tortoise in the genus Gopherus. These lineages offer a powerful system to study speciation, because different biogeographic patterns (physical vs. ecological segregation) are observed at opposing ends of their distributions. We use 82 samples collected from 38 sites, representing the entire species' distribution and generate sequence data for mtDNA and four nuclear loci. A multilocus phylogenetic analysis in *BEAST estimates the species tree. RNA-seq data yield 20,126 synonymous variants from 7665 contigs from two individuals of each of the three lineages. Analyses of these data using the demographic inference package ∂a∂i serve to test the null hypothesis of no gene flow during divergence. The best-fit demographic model for the three taxa is concordant with the *BEAST species tree, and the ∂a∂i analysis does not indicate gene flow among any of the three lineages during their divergence. These analyses suggest that divergence among the lineages occurred in the absence of gene flow and in this scenario the genetic signature of ecological isolation (parapatric model) cannot be differentiated from geographic isolation (allopatric model).

Spanning the Globe: Inter-Governmental Organization (IGO) Information on the Internet.

ERIC Educational Resources Information Center

Harley, Bruce

1995-01-01

Describes gateway systems that can be used to access intergovernmental organization (IGO) information via the Internet, especially IGOs belonging to or affiliated with the United Nations. Highlights include United Nations World Wide Web Site, United Nations Gopher, the World Wide Web Virtual Library, and the Library of Congress's MARVEL Gopher.…

Evolutionary divergency of giant tortoises in Gal?pagos

USGS Publications Warehouse

Fritts, T.H.

1984-01-01

The giant tortoises in the Galapagos Archipelago diverge considerably in size, and in shape and other carapace characteristics. The saddleback morphotype is known only from insular faunas lacking large terrestrial predators (i.e. Galapagos and Mauritius) and in Galapagos is associated with xeric habitats where vertical feeding range and vertical reach in agonistic encounters are adaptive. The large domed morphotype is associated with relatively cool, mesic habitats where intraspecific competition for food and other resources may be less intense than in xeric habitats. Other external characteristics that differ between tortoise populations are also correlated with ecological variation. Tortoises have radiated into a mosaic of ecological conditions in the Galapagos but critical data are lacking on the role of genetic and environmental controls on phenotypic variation. Morphological divergence in tortoises is potentially a better indicator of present ecological conditions than of evolutionary relationships.

Body condition and habitat use by Hermann's tortoises in burnt and intact habitats

PubMed Central

Lecq, S.; Ballouard, J.-M.; Caron, S.; Livoreil, B.; Seynaeve, V.; Matthieu, L.-A.; Bonnet, X.

2014-01-01

In Mediterranean regions, fires threaten terrestrial tortoises. Nevertheless, varying proportions of adults survive fire; these surviving individuals can play a central role for population recovery. The regions devastated by fire often include important habitat of Hermann's tortoises (Testudo hermanni hermanni), so assessing the ability of survivors to persist is essential for conserving the species. Body-condition indices provide an integrative estimate of how well individuals cope with environmental variations and impacts, including fires. Between 2002 and 2009, we monitored Hermann's tortoises in intact and burnt habitats in southeastern France. In summer 2003, a strong fire ravaged half of the surveyed zone, providing an opportunity to compare body condition of tortoises between intact and burnt areas over time. Six years later, the impact of fire on vegetation was still marked; large trees were abundant in the intact area, whereas open shrub vegetation prevailed in the burnt area. In both areas, the mean body condition of tortoises fluctuated over time; however, there were no differences between the two areas. A radio-tracking experiment demonstrated that individuals from each area were residents, and not vagrants commuting between areas. We also assessed changes in body condition and microhabitat use in radio-tracked individuals. We found no significant differences between the tortoises living in the burnt and intact areas, despite subtle differences in habitat use. In conclusion: (i) surviving tortoises in an area ravaged by fire can maintain their body condition like individuals living in an intact area, and thus, individuals from burnt areas should not be translocated to supposedly better areas; and (ii) depopulated burnt areas are likely to be appropriate for population-augmentation programmes. PMID:27293640

The evolution of island gigantism and body size variation in tortoises and turtles

PubMed Central

Jaffe, Alexander L.; Slater, Graham J.; Alfaro, Michael E.

2011-01-01

Extant chelonians (turtles and tortoises) span almost four orders of magnitude of body size, including the startling examples of gigantism seen in the tortoises of the Galapagos and Seychelles islands. However, the evolutionary determinants of size diversity in chelonians are poorly understood. We present a comparative analysis of body size evolution in turtles and tortoises within a phylogenetic framework. Our results reveal a pronounced relationship between habitat and optimal body size in chelonians. We found strong evidence for separate, larger optimal body sizes for sea turtles and island tortoises, the latter showing support for the rule of island gigantism in non-mammalian amniotes. Optimal sizes for freshwater and mainland terrestrial turtles are similar and smaller, although the range of body size variation in these forms is qualitatively greater. The greater number of potential niches in freshwater and terrestrial environments may mean that body size relationships are more complicated in these habitats. PMID:21270022

Spatio-temporal dynamics of pond use and recruitment in Florida gopher frogs (Rana capito aesopus)

Treesearch

Cathryn H. Greenberg

2001-01-01

This study examines spatio-temporal dynamics of Florida gopher frog (Rang capito aesopus) breeding and juvenile recruitment. Ponds were situated within a hardwood-invaded or a savanna-like longleaf pine-wiregrass upland matrix. Movement (N = 1444) was monitored using intermittent drift fences with pitfall and funnel traps at eight...

Getting Your Name on the Right Desktops, or How to Be Found on the Internet.

ERIC Educational Resources Information Center

Fagan, Phoebe

1995-01-01

Explains aspects of an Internet gopher developed by the National Institute of Standards and Technology's (NIST) Standard Reference Data (SRD) program. The gopher lists SRD projects and data centers and enables users to find and contact the researchers associated with these projects. Delivery of scientific information is also discussed. (LRW)

Checklist of tortoise beetles (Coleoptera, Chrysomelidae, Cassidinae) from Colombia with new data and description of a new species

PubMed Central

Borowiec, Lech; Świętojańska, Jolanta

2015-01-01

Abstract A new tortoise beetle species, Cyrtonota abrili, is described from the Antioquia and Caldas departments in Colombia. New faunistic data are provided for 87 species, including 16 new additions to the country’s fauna. A checklist of the known 238 species of tortoise beetles recorded from Colombia is given. PMID:26448702

Morphological Adaptations for Digging and Climate-Impacted Soil Properties Define Pocket Gopher (Thomomys spp.) Distributions

PubMed Central

Marcy, Ariel E.; Fendorf, Scott; Patton, James L.; Hadly, Elizabeth A.

2013-01-01

Species ranges are mediated by physiology, environmental factors, and competition with other organisms. The allopatric distribution of five species of northern Californian pocket gophers (Thomomys spp.) is hypothesized to result from competitive exclusion. The five species in this environmentally heterogeneous region separate into two subgenera, Thomomys or Megascapheus, which have divergent digging styles. While all pocket gophers dig with their claws, the tooth-digging adaptations of subgenus Megascapheus allow access to harder soils and climate-protected depths. In a Northern Californian locality, replacement of subgenus Thomomys with subgenus Megascapheus occurred gradually during the Pleistocene-Holocene transition. Concurrent climate change over this transition suggests that environmental factors – in addition to soil – define pocket gopher distributional limits. Here we show 1) that all pocket gophers occupy the subset of less energetically costly soils and 2) that subgenera sort by percent soil clay, bulk density, and shrink-swell capacity (a mineralogical attribute). While clay and bulk density (without major perturbations) stay constant over decades to millennia, low precipitation and high temperatures can cause shrink-swell clays to crack and harden within days. The strong yet underappreciated interaction between soil and moisture on the distribution of vertebrates is rarely considered when projecting species responses to climatic change. Furthermore, increased precipitation alters the weathering processes that create shrink-swell minerals. Two projected outcomes of ongoing climate change—higher temperatures and precipitation—will dramatically impact hardness of soil with shrink-swell minerals. Current climate models do not include factors controlling soil hardness, despite its impact on all organisms that depend on a stable soil structure. PMID:23717675

Microsatellite analysis of genetic divergence among populations of giant Galápagos tortoises.

PubMed

Ciofi, Claudio; Milinkovitch, Michel C; Gibbs, James P; Caccone, Adalgisa; Powell, Jeffrey R

2002-11-01

Giant Galápagos tortoises represent an interesting model for the study of patterns of genetic divergence and adaptive differentiation related to island colonization events. Recent mitochondrial DNA work elucidated the evolutionary history of the species and helped to clarify aspects of nomenclature. We used 10 microsatellite loci to assess levels of genetic divergence among and within island populations. In particular, we described the genetic structure of tortoises on the island of Isabela, where discrimination of different taxa is still subject of debate. Individual island populations were all genetically distinct. The island of Santa Cruz harboured two distinct populations. On Isabela, populations of Volcan Wolf, Darwin and Alcedo were significantly different from each other. On the other hand, Volcan Wolf showed allelic similarity with the island of Santiago. On Southern Isabela, lower genetic divergence was found between Northeast Sierra Negra and Volcan Alcedo, while patterns of gene flow were recorded among tortoises of Cerro Azul and Southeast Sierra Negra. These tortoises have endured heavy exploitation during the last three centuries and recently attracted much concern due to the current number of stochastic and deterministic threats to extant populations. Our study complements previous investigation based on mtDNA diversity and provides further information that may help devising tortoise management plans.

Plant species dispersed by Galapagos tortoises surf the wave of habitat suitability under anthropogenic climate change

PubMed Central

Blake, Stephen; Soultan, Alaaeldin; Guézou, Anne; Cabrera, Fredy; Lötters, Stefan

2017-01-01

Native biodiversity on the Galapagos Archipelago is severely threatened by invasive alien species. On Santa Cruz Island, the abundance of introduced plant species is low in the arid lowlands of the Galapagos National Park, but increases with elevation into unprotected humid highlands. Two common alien plant species, guava (Psidium guajava) and passion fruit (Passiflora edulis) occur at higher elevations yet their seeds are dispersed into the lowlands by migrating Galapagos tortoises (Chelonoidis spp.). Tortoises transport large quantities of seeds over long distances into environments in which they have little or no chance of germination and survival under current climate conditions. However, climate change is projected to modify environmental conditions on Galapagos with unknown consequences for the distribution of native and introduced biodiversity. We quantified seed dispersal of guava and passion fruit in tortoise dung piles and the distribution of adult plants along two elevation gradients on Santa Cruz to assess current levels of ‘wasted’ seed dispersal. We computed species distribution models for both taxa under current and predicted future climate conditions. Assuming that tortoise migratory behaviour continues, current levels of “wasted” seed dispersal in lowlands were projected to decline dramatically in the future for guava but not for passion fruit. Tortoises will facilitate rapid range expansion for guava into lowland areas within the Galapagos National Park where this species is currently absent. Coupled with putative reduction in arid habitat for native species caused by climate change, tortoise driven guava invasion will pose a serious threat to local plant communities. PMID:28727747

Plant species dispersed by Galapagos tortoises surf the wave of habitat suitability under anthropogenic climate change.

PubMed

Ellis-Soto, Diego; Blake, Stephen; Soultan, Alaaeldin; Guézou, Anne; Cabrera, Fredy; Lötters, Stefan

2017-01-01

Native biodiversity on the Galapagos Archipelago is severely threatened by invasive alien species. On Santa Cruz Island, the abundance of introduced plant species is low in the arid lowlands of the Galapagos National Park, but increases with elevation into unprotected humid highlands. Two common alien plant species, guava (Psidium guajava) and passion fruit (Passiflora edulis) occur at higher elevations yet their seeds are dispersed into the lowlands by migrating Galapagos tortoises (Chelonoidis spp.). Tortoises transport large quantities of seeds over long distances into environments in which they have little or no chance of germination and survival under current climate conditions. However, climate change is projected to modify environmental conditions on Galapagos with unknown consequences for the distribution of native and introduced biodiversity. We quantified seed dispersal of guava and passion fruit in tortoise dung piles and the distribution of adult plants along two elevation gradients on Santa Cruz to assess current levels of 'wasted' seed dispersal. We computed species distribution models for both taxa under current and predicted future climate conditions. Assuming that tortoise migratory behaviour continues, current levels of "wasted" seed dispersal in lowlands were projected to decline dramatically in the future for guava but not for passion fruit. Tortoises will facilitate rapid range expansion for guava into lowland areas within the Galapagos National Park where this species is currently absent. Coupled with putative reduction in arid habitat for native species caused by climate change, tortoise driven guava invasion will pose a serious threat to local plant communities.

Insights into the Introduction History and Population Genetic Dynamics of the Nile Monitor (Varanus niloticus) in Florida.

PubMed

Wood, Jared P; Dowell, Stephanie A; Campbell, Todd S; Page, Robert B

2016-07-01

Invasive species are widely recognized as important drivers of the ongoing biodiversity crisis. The US state of Florida is especially susceptible to the proliferation of invasive reptiles, and nonnative lizards currently outnumber native lizard species. At present, there are 3 documented breeding populations of the Nile monitor (Varanus niloticus) in different regions of Southern Florida, and these populations are considered potential dangers to threatened, fossorial endemics, such as burrowing owls, American crocodiles, and gopher tortoises. Nevertheless, at present, both the introduction histories of these populations and the degree to which they are connected by gene flow are not known. To address these issues, we genotyped V. niloticus from Cape Coral, Homestead Air Reserve Base, and West Palm Beach at 17 microsatellite loci and conducted a variety of analyses to assess both intrapopulation genetic diversity, the degree of gene flow between populations, and the most likely introduction scenario. The results of our analyses demonstrate that all 3 populations have limited genetic diversity (mean number of effective alleles across loci in all 3 populations ~ 2.00) and are highly differentiated from one another (G ST = 0.268; G″ST = 0.628). Our results also suggest that these populations resulted from independent introduction events that occurred within the past few decades. Consequently, we advise that wildlife managers focus management efforts on containment of existing populations and intensification of monitoring efforts on potential migration corridors. © The American Genetic Association. 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Postbreeding movements of the dark gopher frog, Rana sevosa goin and netting: Implications for conservation and management

Treesearch

Stephen C. Richter; Jeanne E. Young; Richard A. Seigal; Glen N. Johnson

2001-01-01

Conservation plans for amphibians often focus on activities at the breeding site, but for species that use temstrial habitats for much of the year, an understanding of nonbreeding habitat use is also essential. We used radio telemetry to study the postbreeding movements of individuals of the only known population of dark gopher frogs, Rana sevosa,...

Terrestrial movements and habitat use of gopher frogs in longleaf pine forests: a comparative study of juveniles and adults

Treesearch

Elizabeth A. Roznik; Steve A. Johnson; Cathryn H. Greenberg; George W. Tanner

2009-01-01

Many animals exhibit changes in patterns of movement and habitat use as they age, and understanding such ontogenetic shifts is important for ensuring that habitat management is appropriate for all life stages. We used radiotelemetry to study movements and habitat use of juvenile and adult gopher frogs (Rana capito) as they migrated from the same ponds following...

Diet composition of common ravens across the urban-wildland interface of the West Mojave Desert

USGS Publications Warehouse

Kristan, William B.; Boarman, William I.; Crayon, John J.

2004-01-01

Common ravens (Corvus corax) are human-subsidized scavengers and predators in the Mojave Desert. They have increased dramatically in number and have been implicated as contributors to the decline in desert tortoise (Gopherus agassizii) populations. Known patterns of increased fledging success near human developments suggested that food was the most likely resource subsidy received by ravens. Because ravens are opportunistic foragers with a generalist diet, we predicted that the types of resource subsidy provided by different kinds of human developments should be reflected in measures of diet composition of breeding ravens. We estimated diet composition from contents of raven pellets collected at nests and related diet composition to distance of the nests from roads and point sources of resource subsidies, such as towns or landfills. Ravens that nested close to point subsidies far from major roads had the greatest incidence of trash in their diets. Ravens that nested close to roads but far from point subsidies had a low incidence of trash and a higher incidence of presumably road-killed mammals and reptiles. Ravens far from both roads and point subsidies had more plant material and arthropods, and ravens close to both roads and point subsidies had more birds and amphibians. Diet diversity was not related to distance from roads or developments. Fledging success was correlated with diet composition, such that birds with diets consistent with trash or road-kill subsidies fledged the greatest number of chicks. Our results suggest that ravens forage opportunistically on foods available near their nests, and different kinds of human developments contribute different foods. Improved management of landfills and highway fencing to reduce road-kills may help slow the growth of raven populations in the Mojave.

One foot out the door: limb function during swimming in terrestrial versus aquatic turtles.

PubMed

Young, Vanessa K Hilliard; Vest, Kaitlyn G; Rivera, Angela R V; Espinoza, Nora R; Blob, Richard W

2017-01-01

Specialization for a new habitat often entails a cost to performance in the ancestral habitat. Although aquatic lifestyles are ancestral among extant cryptodiran turtles, multiple lineages, including tortoises (Testudinidae) and emydid box turtles (genus Terrapene), independently specialized for terrestrial habitats. To what extent is swimming function retained in such lineages despite terrestrial specialization? Because tortoises diverged from other turtles over 50 Ma, but box turtles did so only 5 Ma, we hypothesized that swimming kinematics for box turtles would more closely resemble those of aquatic relatives than those of tortoises. To test this prediction, we compared high-speed video of swimming Russian tortoises (Testudo horsfieldii), box turtles (Terrapene carolina) and two semi-aquatic emydid species: sliders (Trachemys scripta) and painted turtles (Chrysemys picta). We identified different kinematic patterns between limbs. In the forelimb, box turtle strokes most resemble those of tortoises; for the hindlimb, box turtles are more similar to semi-aquatic species. Such patterns indicate functional convergence of the forelimb of terrestrial species, whereas the box turtle hindlimb exhibits greater retention of ancestral swimming motions. © 2017 The Author(s).

One foot out the door: limb function during swimming in terrestrial versus aquatic turtles

PubMed Central

Vest, Kaitlyn G.; Rivera, Angela R. V.; Espinoza, Nora R.; Blob, Richard W.

2017-01-01

Specialization for a new habitat often entails a cost to performance in the ancestral habitat. Although aquatic lifestyles are ancestral among extant cryptodiran turtles, multiple lineages, including tortoises (Testudinidae) and emydid box turtles (genus Terrapene), independently specialized for terrestrial habitats. To what extent is swimming function retained in such lineages despite terrestrial specialization? Because tortoises diverged from other turtles over 50 Ma, but box turtles did so only 5 Ma, we hypothesized that swimming kinematics for box turtles would more closely resemble those of aquatic relatives than those of tortoises. To test this prediction, we compared high-speed video of swimming Russian tortoises (Testudo horsfieldii), box turtles (Terrapene carolina) and two semi-aquatic emydid species: sliders (Trachemys scripta) and painted turtles (Chrysemys picta). We identified different kinematic patterns between limbs. In the forelimb, box turtle strokes most resemble those of tortoises; for the hindlimb, box turtles are more similar to semi-aquatic species. Such patterns indicate functional convergence of the forelimb of terrestrial species, whereas the box turtle hindlimb exhibits greater retention of ancestral swimming motions. PMID:28123109

Threats to desert tortoise populations: a critical review of the literature

USGS Publications Warehouse

Boarman, William I.

2002-01-01

Decision in resource management are generally based on a combination of sociopolitical, economic, and environmental factors, and may be biased by personal values. These three components often contradict each other resulting in controversy. Controversies can usually be reduced when solid scientific evidence is used to support or refute a decision. However, it is important to recognize that data often do little to alter antagonists' positions when differences in values are the bases if the dispute. But, supporting data can make the decision more defensible, both legally and ethically, especially if the data supporting all opposing viewpoints are included in the decision-making process. Resource management decisions must be made using the best scientific information currently available. However, scientific data vary in two important measures of quality: reliability and validity. The reliability of the data is a measure of the degree to which the observations or conclusion can be repeated. Validity of the data is a measure of the degree to which the observation or conclusion reflects what actually occurs in nature. How the data are collected strongly affects the reliability of validity of ecological conclusions that can be made. Research data potentially relevant to management come from different sources, and the source often provides clues to the reliability and, to a certain extent, validity of data. Understanding the quality of data being used to make management decisions helps to separate the philosophical or value-based aspects of arguments from the objective ones, thus helping to clarify the decisions and judgments that need to be made. The West Mojave Plan is a multispecies, bioregional plan for the management of natural resources within a 9.4 million-acre area of the Mojave Desert in California. The plan addresses the legal requirements for the recovery of the desert tortoise (Gopherus agazzizii), a threatened species, but also covers an additional approximately 80 species of plants and animals assigned special status by the Bureau of Land Management, U. S. Fish and Wildlife Service, and California Department of Fish and Game. Within the planning area, 28 separate jurisdictions (counties, cities, towns, military installations, etc.) seek programmatic prescriptions that will facilitate streamlined environmental review, result in expedited authorization for development projects, and protect listed and unlisted species into the foreseeable future to avoid or minimize conflicts between proposed development and species' conservation and recovery. All of the scientific data available concerning the biology and management of these approximately 80 species and their habitats must be evaluated to develop a scientifically credible plan. This document provides an overview and evaluation of the knowledge of the major threats to the persistence and recovery of desert tortoise populations. I was specifically asked to evaluate the scientific veracity of the data and reports available. I summarize the data presently available with particular focus on the West Mojave Desert, evaluate the scientific integrity of the data. and identify major gaps in the available knowledge. I do not attempt to provide in-depth details on each study or threat; for more details I encourage the reader to consult the individual papers or reports city throughout this report (many of which are available at most university libraries and at the West Mojave Plan office in Riverside, California). I also do not attempt to characterize or evaluate the past or present management actions, except where they have direct bearing on evaluation of threats, nor do I attempt, for the most part, to acquire, generate, or evaluate new or existing, but uninterpreted data.

Ancient tortoise hunting in the southwest Pacific

NASA Astrophysics Data System (ADS)

Hawkins, Stuart; Worthy, Trevor H.; Bedford, Stuart; Spriggs, Matthew; Clark, Geoffrey; Irwin, Geoff; Best, Simon; Kirch, Patrick

2016-12-01

We report the unprecedented Lapita exploitation and subsequent extinction of large megafauna tortoises (?Meiolania damelipi) on tropical islands during the late Holocene over a 281,000 km2 region of the southwest Pacific spanning from the Vanuatu archipelago to Viti Levu in Fiji. Zooarchaeological analyses have identified seven early archaeological sites with the remains of this distinctive hornless tortoise, unlike the Gondwanan horned meiolaniid radiation to the southwest. These large tortoise radiations in the Pacific may have contributed to the rapid dispersal of early mobile Neolithic hunters throughout southwest Melanesia and on to western Polynesia. Subsequent rapid extinctions of these terrestrial herbivorous megafauna are likely to have led to significant changes in ecosystems that help explain changes in current archaeological patterns from Post-Lapita contexts in the region.

Ancient tortoise hunting in the southwest Pacific

PubMed Central

Hawkins, Stuart; Worthy, Trevor H.; Bedford, Stuart; Spriggs, Matthew; Clark, Geoffrey; Irwin, Geoff; Best, Simon; Kirch, Patrick

2016-01-01

We report the unprecedented Lapita exploitation and subsequent extinction of large megafauna tortoises (?Meiolania damelipi) on tropical islands during the late Holocene over a 281,000 km2 region of the southwest Pacific spanning from the Vanuatu archipelago to Viti Levu in Fiji. Zooarchaeological analyses have identified seven early archaeological sites with the remains of this distinctive hornless tortoise, unlike the Gondwanan horned meiolaniid radiation to the southwest. These large tortoise radiations in the Pacific may have contributed to the rapid dispersal of early mobile Neolithic hunters throughout southwest Melanesia and on to western Polynesia. Subsequent rapid extinctions of these terrestrial herbivorous megafauna are likely to have led to significant changes in ecosystems that help explain changes in current archaeological patterns from Post-Lapita contexts in the region. PMID:27922064

Feeding behaviour in a 'basal' tortoise provides insights on the transitional feeding mode at the dawn of modern land turtle evolution.

PubMed

Natchev, Nikolay; Tzankov, Nikolay; Werneburg, Ingmar; Heiss, Egon

2015-01-01

Almost all extant testudinids are highly associated with terrestrial habitats and the few tortoises with high affinity to aquatic environments are found within the genus Manouria. Manouria belongs to a clade which forms a sister taxon to all remaining tortoises and is suitable as a model for studying evolutionary transitions within modern turtles. We analysed the feeding behaviour of Manouria emys and due to its phylogenetic position, we hypothesise that the species might have retained some ancestral features associated with an aquatic lifestyle. We tested whether M. emys is able to feed both in aquatic and terrestrial environments. In fact, M. emys repetitively tried to reach submerged food items in water, but always failed to grasp them-no suction feeding mechanism was applied. When feeding on land, M. emys showed another peculiar behaviour; it grasped food items by its jaws-a behaviour typical for aquatic or semiaquatic turtles-and not by the tongue as generally accepted as the typical feeding mode in all tortoises studied so far. In M. emys, the hyolingual complex remained retracted during all food uptake sequences, but the food transport was entirely lingual based. The kinematical profiles significantly differed from those described for other tortoises and from those proposed from the general models on the function of the feeding systems in lower tetrapods. We conclude that the feeding behaviour of M. emys might reflect a remnant of the primordial condition expected in the aquatic ancestor of the tortoises.

Do Handling and Transport Stress Influence Adrenocortical Response in the Tortoises (Testudo hermanni)?

PubMed Central

Medica, Pietro; Ferlazzo, Adriana

2014-01-01

The goal of this study was to analyze circulating cortisol levels from tortoises (Testudo hermanni) to establish reference intervals and to develop guidelines for the interpretation of the effect of handling and transport stress. Blood samples were obtained from the caudal venous from 23 healthy juvenile tortoises (9 males and 14 females), aged 8–20 years, in basal condition, four weeks prior to and four weeks following handling and short transportation. The study was carried out on the experimental group: 10 tortoises, 4 males and 6 females, and on a control group: 13 tortoises, 5 males and 8 females. Compared to basal values, circulating cortisol concentrations was higher after handling and transport (+286%; P < 0.001), with an increase of +246% (P < 0.001) in males, +236% (P < 0.005) in females, +370% (P < 0.005) in subjects aged 8–12 years, and +240% (P < 0.001) in subjects aged 13–20 years. These observations support the hypotheses that cortisol may act to mediate the effects of handling and transport stress in this species and that four weeks following handling and transport were insufficient to restore their homeostasis. PMID:24977048

Persistence of distinctive morphotypes in the native range of the CITES-listed Aldabra giant tortoise.

PubMed

Turnbull, Lindsay A; Ozgul, Arpat; Accouche, Wilna; Baxter, Rich; ChongSeng, Lindsay; Currie, Jock C; Doak, Naomi; Hansen, Dennis M; Pistorius, Pierre; Richards, Heather; van de Crommenacker, Janske; von Brandis, Rainer; Fleischer-Dogley, Frauke; Bunbury, Nancy

2015-12-01

Understanding the extent of morphological variation in the wild population of Aldabra giant tortoises is important for conservation, as morphological variation in captive populations has been interpreted as evidence for lingering genes from extinct tortoise lineages. If true, this could impact reintroduction programmes in the region. The population of giant tortoises on Aldabra Atoll is subdivided and distributed around several islands. Although pronounced morphological variation was recorded in the late 1960s, it was thought to be a temporary phenomenon. Early researchers also raised concerns over the future of the population, which was perceived to have exceeded its carrying capacity. We analyzed monthly monitoring data from 12 transects spanning a recent 15-year period (1998-2012) during which animals from four subpopulations were counted, measured, and sexed. In addition, we analyzed survival data from individuals first tagged during the early 1970s. The population is stable with no sign of significant decline. Subpopulations differ in density, but these differences are mostly due to differences in the prevailing vegetation type. However, subpopulations differ greatly in both the size of animals and the degree of sexual dimorphism. Comparisons with historical data reveal that phenotypic differences among the subpopulations of tortoises on Aldabra have been apparent for the last 50 years with no sign of diminishing. We conclude that the giant tortoise population on Aldabra is subject to varying ecological selection pressures, giving rise to stable morphotypes in discrete subpopulations. We suggest therefore that (1) the presence of morphological differences among captive Aldabra tortoises does not alone provide convincing evidence of genes from other extinct species; and (2) Aldabra serves as an important example of how conservation and management in situ can add to the scientific value of populations and perhaps enable them to better adapt to future ecological pressures.

Ecological Health and Water Quality Assessments in Big Creek Lake, AL

NASA Astrophysics Data System (ADS)

Childs, L. M.; Frey, J. W.; Jones, J. B.; Maki, A. E.; Brozen, M. W.; Malik, S.; Allain, M.; Mitchell, B.; Batina, M.; Brooks, A. O.

2008-12-01

Big Creek Lake (aka J.B. Converse Reservoir) serves as the water supply for the majority of residents in Mobile County, Alabama. The area surrounding the reservoir serves as a gopher tortoise mitigation bank and is protected from further development, however, impacts from previous disasters and construction have greatly impacted the Big Creek Lake area. The Escatawpa Watershed drains into the lake, and of the seven drainage streams, three have received a 303 (d) (impaired water bodies) designation in the past. In the adjacent ecosystem, the forest is experiencing major stress from drought and pine bark beetle infestations. Various agencies are using control methods such as pesticide treatment to eradicate the beetles. There are many concerns about these control methods and the run-off into the ecosystem. In addition to pesticide control methods, the Highway 98 construction projects cross the north area of the lake. The community has expressed concern about both direct and indirect impacts of these construction projects on the lake. This project addresses concerns about water quality, increasing drought in the Southeastern U.S., forest health as it relates to vegetation stress, and state and federal needs for improved assessment methods supported by remotely sensed data to determine coastal forest susceptibility to pine bark beetles. Landsat TM, ASTER, MODIS, and EO-1/ALI imagery was employed in Normalized Difference Vegetation Index (NDVI) and Normalized Difference Moisture Index (NDMI), as well as to detect concentration of suspended solids, chlorophyll and water turbidity. This study utilizes NASA Earth Observation Systems to determine how environmental conditions and human activity relate to pine tree stress and the onset of pine beetle invasion, as well as relate current water quality data to community concerns and gain a better understanding of human impacts upon water resources.

Reptile trade and the risk of exotic tick introductions into southern South American countries.

PubMed

González-Acuña, D; Beldoménico, P M; Venzal, J M; Fabry, M; Keirans, J E; Guglielmone, A A

2005-01-01

Ticks exotic for the Neotropical region were found on Python regius imported into Argentina and Chile. All ticks (7 males and 3 females) were classified as Amblyomma latum Koch, 1844 ( = Aponomma latum). Additionally, four lots comprising 18 males of the Argentinean tortoise tick, Amblyomma argentinae Neumann, 1904, were found on a terrestrial tortoise, Chelonoidis chilensis, and on three terrestrial tortoises (probably C. chilensis) imported to Uruguay presumably from Argentina). These findings alert us to the risk of expanding the distribution of reptile parasites and their diseases into regions previously free of these parasites.

Semen collection and ejaculate characteristics of the Leopard Tortoise (Stigmochelys pardalis)

PubMed Central

Mitchell, Mark A

2017-01-01

Abstract The preservation of spermatozoa is an important tool used in conservation programs to increase the genetic diversity of threatened and endangered species. Although routinely used to manage conservation programs for higher vertebrates, there have been limited attempts to establish reproductive assistance programs for tortoises. The purpose of this study was to develop a model for collecting and characterizing semen in Testudinidae. Semen was collected from 13/16 (81.2%, 95% CI: 62–100) adult male leopard tortoises (Stigmochelys pardalis) via electroejaculation under propofol anesthesia. Semen samples were collected most frequently after the second series of electrostimulations (6/13, 46.1%), with fewer animals producing semen after the first (5/13, 38.5%) or third (2/13, 15.4%) electrostimulations. The average volume of a semen sample in the tortoises was 0.26 ml (standard deviation: 0.16, minimum–maximum: 0.1–0.6), the average spermatozoal concentration was 101.62 × 106/ml, and the average motility at time of collection was 57.3%. A rapid decrease in motility was observed in refrigerated samples over 24 h resulting in a median motility of 0% at 24 h post-collection. The results of this study suggest that electroejaculation is a safe and efficient method for collecting semen from leopard tortoises. PMID:29230293

Low tortoise abundances in pine forest plantations in forest-shrubland transition areas.

PubMed

Rodríguez-Caro, Roberto C; Oedekoven, Cornelia S; Graciá, Eva; Anadón, José D; Buckland, Stephen T; Esteve-Selma, Miguel A; Martinez, Julia; Giménez, Andrés

2017-01-01

In the transition between Mediterranean forest and the arid subtropical shrublands of the southeastern Iberian Peninsula, humans have transformed habitat since ancient times. Understanding the role of the original mosaic landscapes in wildlife species and the effects of the current changes as pine forest plantations, performed even outside the forest ecological boundaries, are important conservation issues. We studied variation in the density of the endangered spur-thighed tortoise (Testudo graeca) in three areas that include the four most common land types within the species' range (pine forests, natural shrubs, dryland crop fields, and abandoned crop fields). Tortoise densities were estimated using a two-stage modeling approach with line transect distance sampling. Densities in dryland crop fields, abandoned crop fields and natural shrubs were higher (>6 individuals/ha) than in pine forests (1.25 individuals/ha). We also found large variation in density in the pine forests. Recent pine plantations showed higher densities than mature pine forests where shrub and herbaceous cover was taller and thicker. We hypothesize that mature pine forest might constrain tortoise activity by acting as partial barriers to movements. This issue is relevant for management purposes given that large areas in the tortoise's range have recently been converted to pine plantations.

Laser ablation ICP-MS profiling and semiquantitative determination of trace element concentrations in desert tortoise shells: documenting the uptake of elemental toxicants.

PubMed

Seltzer, Michaeld; Berry, Kristinh

2005-03-01

The outer keratin layer (scute) of desert tortoise shells consists of incrementally grown laminae in which various bioaccumulated trace elements are sequestered during scute deposition. Laser ablation ICP-MS examination of laminae in scutes of dead tortoises revealed patterns of trace elemental distribution from which the chronology of elemental uptake can be inferred. These patterns may be of pathologic significance in the case of elemental toxicants such as arsenic, which has been linked to both shell and respiratory diseases. Laser ablation transects, performed along the lateral surfaces of sectioned scutes, offered the most successful means of avoiding exogenous contamination that was present on the scute exterior. Semiquantitative determination of elemental concentrations was achieved using sulfur, a keratin matrix element, as an internal standard. The results presented here highlight the potential of laser ablation ICP-MS as a diagnostic tool for investigating toxic element uptake as it pertains to tortoise morbidity and mortality.

Laser ablation ICP-MS profiling and semiquantitative determination of trace element concentrations in desert tortoise shells: Documenting the uptake of elemental toxicants

USGS Publications Warehouse

Seltzer, M.D.; Berry, K.H.

2005-01-01

The outer keratin layer (scute) of desert tortoise shells consists of incrementally grown laminae in which various bioaccumulated trace elements are sequestered during scute deposition. Laser ablation ICP-MS examination of laminae in scutes of dead tortoises revealed patterns of trace elemental distribution from which the chronology of elemental uptake can be inferred. These patterns may be of pathologic significance in the case of elemental toxicants such as arsenic, which has been linked to both shell and respiratory diseases. Laser ablation transects, performed along the lateral surfaces of sectioned scutes, offered the most successful means of avoiding exogenous contamination that was present on the scute exterior. Semiquantitative determination of elemental concentrations was achieved using sulfur, a keratin matrix element, as an internal standard. The results presented here highlight the potential of laser ablation ICP-MS as a diagnostic tool for investigating toxic element uptake as it pertains to tortoise morbidity and mortality.

Hematologic and plasma biochemical changes associated with fenbendazole administration in Hermann's tortoises (testudo hermanni).

PubMed

Neiffer, Donald L; Lydick, Dianna; Burks, Kyle; Doherty, Donna

2005-12-01

Toxicosis associated with benzimidazole anthelmintics has been reported with increasing frequency in zoologic collections. Clinical signs, clinicopathologic abnormalities, and gross and histologic lesions are primarily the result of damage to the gastrointestinal and hematopoietic systems. Profound leukopenia, especially granulocytopenia, is the most common and severe clinicopathologic change associated with benzimidazole administration. Death usually occurs from overwhelming systemic bacterial and/or fungal infections secondary to severe immunosuppression. In this 125-day study, six male Hermann's tortoises (Testudo hermanni) were treated orally with two 5-day courses of fenbendazole 2 wk apart at a dosage of 50 mg/kg. Serial blood samples were used to assess hematologic and plasma biochemical changes before, during, and following the treatment period. Although the tortoises remained healthy, blood sampling indicated an extended heteropenia with transient hypoglycemia, hyperuricemia, hyperphosphatemia, and equivocal hyperproteinemia/hyperglobulinemia, which were considered to be in response to fenbendazole administration. Changes in several other clinicopathologic parameters appeared to correlate with fenbendazole administration. The hematologic and biochemical changes seen in the healthy animals in this study should be considered when treating compromised tortoises with fenbendazole. Hematologic and plasma biochemical status of tortoises/reptiles should be determined before treatment and monitored during the treatment period. The risk of mortality of an individual from nematode infection should be assessed relative to the potential for metabolic alteration and secondary septicemia following damage to hematopoietic and gastrointestinal systems by fenbendazole.

The effect of hillslope angle on pocket gopher (Thomomys bottae) burrow geometry.

PubMed

Seabloom, E W; Reichman, O J; Gabet, E J

2000-10-01

One way for animals to decrease energy expenditures is to minimize the cost of movement. For animals dwelling on slopes, gravity can impart a large energetic cost to movement. For this reason, animals traveling aboveground alter their movement patterns in response to the steepness of terrain (specifically hillslope angle) so as to minimize their energetic costs. Subterranean animals should also benefit from choosing optimum movement paths in relation to hillslopes but concurrently must factor the cost of excavation into their movement decisions. In cases where the excavation costs are much higher than the costs of working against gravity, excavation costs may override the consideration of gravitational costs and movement of subterranean animals may be independent of hillslope angle. To determine the response of a subterranean animal to hillslope angle, we excavated tunnels in the burrow systems of 19 pocket gophers in southern California that occupied hillslopes ranging from 2 to 30°. At each excavation we measured several characteristics of burrow geometry and used these data in a model of pocket gopher energetics to calculate the cost of tunnel construction at the various hillslope angles. We found that the cost of tunnel construction was independent of hillslope angle, and that the costs of shearing soil and pushing soil horizontally through the tunnels were 3 orders of magnitude greater than the costs of lifting the soil against the force of gravity. Accordingly, pocket gopher foraging tunnels were oriented independently of the hillslope. The decoupling of the movement patterns of subterranean animals from the effects of gravity is a distinctive feature of the subterranean habit compared to the movement of aboveground animals. Because of the important effects of tunnel construction on soil processes, this unique biological feature of subterranean animals has implications for basic physical processes, such as soil erosion. We found that the rate of soil flux generated by pocket gopher activity was invariant to hillslope. This relationship is in contrast to the most common model of soil movement generated by purely physical processes.

A Tour Guide to the Latent Realm

ERIC Educational Resources Information Center

Borsboom, Denny

2008-01-01

Achilles and the tortoise want to predict peoples' running performance from their age. In determining age the tortoise has cleverly asked his participants for their passports and has noted their date of birth, before letting them run half the distance between Achilles and himself. Achilles, however, has given his participants a questionnaire…

Modeling population response to anthropogenic threats for a long-lived reptile, the desert tortoise

EPA Science Inventory

Background/Question/Methods The decline in desert tortoise population densities and abundances since the 1970s has been attributed to numerous threats, leading scientists, land managers, and conservationists to describe the plight of the species as a “death by a thousand cuts.” ...

Evaluations of plastic mesh tubes for protecting conifer seedling from pocket gophers in three western states

USGS Publications Warehouse

Engeman, Richard M.; Anthony, Richard M.; Barnes, Victor G.; Krupa, Heather W.; Evans, James

1999-01-01

The efficacy of plastic mesh tubes for protecting conifer seedlings from pocket gopher damage was evaluated on three national forest lands in three states. In each area, cohorts of 640 protected seedlings and 640 unprotected seedlings (3,840 total) were individually monitored for damage, survival, and growth twice each summer for 5 yr after planting. Substantial differences were found between protected and unprotected seedlings for time until occurrence of damage, survival time, proportion damaged and proportion surviving, as well as differences in growth. Over the three forest study sites, the proportion of unprotected seedlings damaged ranged from 60-89%, whereas the proportion of protected seedlings damaged after 5 yr ranged from 18-27%. The proportion of unprotected seedlings that died of gopher damage over 5 yr ranged from 46-64%, versus 1-19% for protected seedlings. Height growth was 25% greater for protected seedlings. Even when only undamaged seedlings were considered, protected seedlings exhibited superior height growth, possibly due to a more favorable microclimate provided by the tubes. These results were reflected in the higher and more uniform stocking rates for protected seedlings.

Mapping pocket gopher burrow systems with expanding polyurethane foam

DOE Office of Scientific and Technical Information (OSTI.GOV)

Felthauser, M.; McInroy, D.

The impetus for this study arose from the need to isolate buried chemical and radioactive waste from burrowing animals. In a study of barrier materials that inhibit burrowing by pocket gophers (Thomomys spp.) into waste material, it was necessary to map tunnel systems as a function of depth and soil type. A method of mapping burrow systems was needed that would be economical, portable, useful in a variety of soil types, and give accurate, permanent records of burrow configurations. A method is described for injecting an expanding polyurethane foam to map burrow systems in situ.

Validation and Development of a Certification Program for Using K9s to Survey Desert Tortoises

DTIC Science & Technology

2011-08-01

Mojave Desert tortoises were reported on DOD land, in the Eastern Colorado recovery unit on the Chocolate Mountain Air Gunnery Range; sampling data...McCulloch, M. 2006. Diagnostic accuracy of canine scent detection in early- and late-stage lung and breast cancers. Integrative Cancer Therapies

Ground Wave Emergency Network. Final Operational Capability. Environmental Assessment for Southern Nevada Relay Node, Site No. RN 8W918NV

DTIC Science & Technology

1993-03-05

Supervisor, Fish and Wildlife Service, Ventura, California Field Supervisor, Fish and Wildlife Service, Laguna Nigel, California Assistant Regional...the weight regressions developed by Dr. Michael Weinstein for the tortoises at the Honda project. If a tortoise is determined to be underweight, the

Novel Firmicutes Group Implicated in the Dechlorination of Two Chlorinated Xanthones, Analogues of Natural Organochlorines

PubMed Central

Krzmarzick, Mark J.; Miller, Hanna R.; Yan, Tao

2014-01-01

Although the abundance and diversity of natural organochlorines are well established, much is still unknown about the degradation of these compounds. Triplicate microcosms were used to determine whether, and which, bacterial communities could dechlorinate two chlorinated xanthones (2,7-dichloroxanthone and 5,7-dichloro-1,3-dihydroxylxanthone), analogues of a diverse class of natural organochlorines. According to quantitative-PCR (qPCR) results, several known dechlorinating genera were either not present or not enriched during dechlorination of the xanthones. Denaturing gradient gel electrophoresis, however, indicated that several Firmicutes were enriched in the dechlorinating cultures compared to triplicate controls amended with nonchlorinated xanthones. One such group, herein referred to as the Gopher group, was further studied with a novel qPCR method that confirmed enrichment of Gopher group 16S rRNA genes in the dechlorinating cultures. The enrichment of the Gopher group was again tested with two new sets of triplicate microcosms. Enrichment was observed during chlorinated xanthone dechlorination in one set of these triplicate microcosms. In the other set, two microcosms showed clear enrichment while a third did not. The Gopher group is a previously unidentified group of Firmicutes, distinct from but related to the Dehalobacter and Desulfitobacterium genera; this group also contains clones from at least four unique cultures capable of dechlorinating anthropogenic organochlorines that have been previously described in the literature. This study suggests that natural chlorinated xanthones may be effective biostimulants to enhance the remediation of pollutants and highlights the idea that novel genera of dechlorinators likely exist and may be active in bioremediation and the natural cycling of chlorine. PMID:24296507

76 FR 52363 - Tortoise Power and Energy Infrastructure Fund, Inc. and Tortoise Capital Advisors, L.L.C.; Notice...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-22

... relation to market price and net asset value (``NAV'') per common share) and the relationship between the... relation to NAV per share). Applicants state that the Independent Directors also considered what conflicts... appropriate in the public interest and consistent with the protection of investors and the purposes fairly...

Pine Tortoise Scale

Treesearch

Harvey J. MacAloney

1961-01-01

The pine tortoise scale (Toumeyella numismaticum (P. & M.)) is a soft scale that periodically causes a noticeable amount of mortality of hard pines. Although it was not described until 1920, when it was found on Scotch pine, in northern Wisconsin, there is evidence that it had caused injury much earlier in a number of localities in this and other States. Scale...

77 FR 14514 - TGP Granada, LLC v. Public Service Company of New Mexico; Tortoise Capital Resources Corp...

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2012-03-12

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Docket Nos. EL12-42-000 and EL12-43-000] TGP Granada, LLC v. Public Service Company of New Mexico; Tortoise Capital Resources Corp.: Notice of...), and 385.212 (2012), TGP Granada, LLC (Complainant) filed (1) a formal complaint against the Public...

The evolution of different maternal investment strategies in two closely related desert vertebrates

USGS Publications Warehouse

Ennen, Joshua R.; Lovich, Jeffrey E.; Averill-Murray, Roy C.; Yackulic, Charles B.; Agha, Mickey; Loughran, Caleb; Tennant, Laura A.; Sinervo, Barry

2017-01-01

We compared egg size phenotypes and tested several predictions from the optimal egg size (OES) and bet-hedging theories in two North American desert-dwelling sister tortoise taxa, Gopherus agassizii and G. morafkai, that inhabit different climate spaces: relatively unpredictable and more predictable climate spaces, respectively. Observed patterns in both species differed from the predictions of OES in several ways. Mean egg size increased with maternal body size in both species. Mean egg size was inversely related to clutch order in G. agassizii, a strategy more consistent with the within-generation hypothesis arising out of bet-hedging theory or a constraint in egg investment due to resource availability, and contrary to theories of density dependence, which posit that increasing hatchling competition from later season clutches should drive selection for larger eggs. We provide empirical evidence that one species, G. agassizii, employs a bet-hedging strategy that is a combination of two different bet-hedging hypotheses. Additionally, we found some evidence for G. morafkai employing a conservative bet-hedging strategy. (e.g., lack of intra- and interclutch variation in egg size relative to body size). Our novel adaptive hypothesis suggests the possibility that natural selection favors smaller offspring in late-season clutches because they experience a more benign environment or less energetically challenging environmental conditions (i.e., winter) than early clutch progeny, that emerge under harsher and more energetically challenging environmental conditions (i.e., summer). We also discuss alternative hypotheses of sexually antagonistic selection, which arise from the trade-offs of son versus daughter production that might have different optima depending on clutch order and variation in temperature-dependent sex determination (TSD) among clutches. Resolution of these hypotheses will require long-term data on fitness of sons versus daughters as a function of incubation environment, data as yet unavailable for any species with TSD.

The evolution of different maternal investment strategies in two closely related desert vertebrates.

PubMed

Ennen, Joshua R; Lovich, Jeffrey E; Averill-Murray, Roy C; Yackulic, Charles B; Agha, Mickey; Loughran, Caleb; Tennant, Laura; Sinervo, Barry

2017-05-01

We compared egg size phenotypes and tested several predictions from the optimal egg size (OES) and bet-hedging theories in two North American desert-dwelling sister tortoise taxa, Gopherus agassizii and G. morafkai , that inhabit different climate spaces: relatively unpredictable and more predictable climate spaces, respectively. Observed patterns in both species differed from the predictions of OES in several ways. Mean egg size increased with maternal body size in both species. Mean egg size was inversely related to clutch order in G. agassizii , a strategy more consistent with the within-generation hypothesis arising out of bet-hedging theory or a constraint in egg investment due to resource availability, and contrary to theories of density dependence, which posit that increasing hatchling competition from later season clutches should drive selection for larger eggs. We provide empirical evidence that one species, G. agassizii , employs a bet-hedging strategy that is a combination of two different bet-hedging hypotheses. Additionally, we found some evidence for G. morafkai employing a conservative bet-hedging strategy. (e.g., lack of intra- and interclutch variation in egg size relative to body size). Our novel adaptive hypothesis suggests the possibility that natural selection favors smaller offspring in late-season clutches because they experience a more benign environment or less energetically challenging environmental conditions (i.e., winter) than early clutch progeny, that emerge under harsher and more energetically challenging environmental conditions (i.e., summer). We also discuss alternative hypotheses of sexually antagonistic selection, which arise from the trade-offs of son versus daughter production that might have different optima depending on clutch order and variation in temperature-dependent sex determination (TSD) among clutches. Resolution of these hypotheses will require long-term data on fitness of sons versus daughters as a function of incubation environment, data as yet unavailable for any species with TSD.

Phylogeography and history of giant Galápagos tortoises

USGS Publications Warehouse

Caccone, A.; Gentile, G.; Gibbs, J.P.; Fritts, T.H.; Snell, H.L.; Betts, J.; Powell, J.R.

2002-01-01

We examined the phylogeography and history of giant Galápagos tortoise populations based on mitochondrial DNA sequence data from 161 individuals from 21 sampling sites representing the 11 currently recognized extant taxa. Molecular clock and geological considerations indicate a founding of the monophyletic Galápagos lineage around 2–3 million years ago, which would allow for all the diversification to have occurred on extant islands. Founding events generally occurred from geologically older to younger islands with some islands colonized more than once. Six of the 11 named taxa can be associated with monophyletic maternal lineages. One, Geochelone porteri on Santa Cruz Island, consists of two distinct populations connected by the deepest node in the archipelago-wide phylogeny, whereas tortoises in northwest Santa Cruz are closely related to those on adjacent Pinzón Island. Volcan Wolf, the northernmost volcano of Isabela Island, consists of both a unique set of maternal lineages and recent migrants from other islands, indicating multiple colonizations possibly due to human transport or multiple colonization and partial elimination through competition. These genetic findings are consistent with the mixed morphology of tortoises on this volcano. No clear genetic differentiation between two taxa on the two southernmost volcanoes of Isabela was evident. Extinction of crucial populations by human activities confounds whether domed versus saddleback carapaces of different populations are mono- or polyphyletic. Our findings revealed a complex phylogeography and history for this tortoise radiation within an insular environment and have implications for efforts to conserve these endangered biological treasures.

Mima mounds in the Kenya highlands: significance for the Dalquest-Scheffer hypothesis.

PubMed

Cox, George W; Gakahu, Christopher G

1983-03-01

The Dalquest-Scheffer Hypothesis that Mima mounds in western North America are the long-term product of burrowing activities of geomyid pocket gophers was tested by examination of areas of similar topography in the highlands of Kenya. Two mound areas, located near Nyahururu at an elevation of about 2,400 m, were studied in detail. The mounds ranged from less than 25 cm to 2 m in height and from a few m to about 20 m in diameter, and were not the remains of large termite nests. Populations of the rhizomyid mole rat, Tachyoryctes splendens, a fossorial rodent similar in morphology and social behavior to geomyid pocket gophers, were associated with these mounds. Mound density and dispersion pattern were similar to North American Mima mounds, and the distribution of fresh soil heaps indicated that the activities of these animals were mound-centered. A shallow laterite hardpan underlay these mound areas, fulfilling another requirement of the Dalquest-Scheffer hypothesis. It is concluded that Mima mounds are the product of the burrowing of fossorial rodents such as pocket gophers and mole rats, and that these two groups are convergent in morphology, burrowing behavior, and impact on the landscape.

Reestablishment of endogonaceae on Mount St. Helens: survival of residuals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Allen, M.F.; MacMahon, J.A.; Andersen, D.C.

1984-01-01

The 18 May 1980 eruption of Mount St. Helens resulted in the burial of relatively well developed soils under variable depths of sterile tephra and ash. During summer 1982, we examined a series of sites and estimated the numbers of spores of Endogonaceae that had been transported from the buried soil to the new ground surface by either abiotic or biotic vectors. There was no difference between spore counts of Endogone spp. or Glomus spp. in the buried soils of forests and clear-cuts; spores were rare in the tephra at any site. In areas featuring less than or equal tomore » 50 cm of tephra, spores were transported to the surface by gophers (in previous clear-cut areas) and by ants (in previous forest and clear-cut habitats). In the Pumice Plain, an area devoid of gophers and ants, erosion exposed spores to the surface. We found no evidence to suggest that endogonaceous fungi grow back up root systems from buried horizons. We hypothesize that small-scale perturbations (erosion, gopher and ant mounds) following the major volcanic disturbance may drive succession by exposing buried mycorrhizal and decomposer fungi. 26 references, 2 figures, 3 tables.« less

Biology and medicine of turtles and tortoises.

PubMed

Mautino, M; Page, C D

1993-11-01

Turtles and tortoises are unique reptiles that are gaining popularity as pets. Their anatomy and defense posture hinder, but do not preclude, clinical assessment and performance of routine diagnostic and therapeutic procedures by the clinician. A basic working knowledge of chelonian taxonomy, anatomy, physiology, husbandry, common diseases, and therapeutics will enable the veterinarian to provide health care to this order of reptiles.

USE OF COMPUTED TOMOGRAPHY FOR INVESTIGATION OF HEPATIC LIPIDOSIS IN CAPTIVE CHELONOIDIS CARBONARIA (SPIX, 1824).

PubMed

Marchiori, Adriano; da Silva, Ieverton Cleiton Correia; de Albuquerque Bonelli, Marília; de Albuquerque Zanotti, Luciana Carla Rameh; Siqueira, Daniel B; Zanotti, Alexandre Pinheiro; Costa, Fabiano Séllos

2015-06-01

Computed tomography is a sensitive and highly applicable technique for determining the degree of radiographic attenuation of the hepatic parenchyma. Radiodensity measurements of the liver can help in the diagnosis of hepatic lipidosis in humans and animals. The objective was to investigate the presence of hepatic lipidosis in captive red-footed tortoises (Chelonoidis carbonaria) using computed tomography. Computed tomography was performed in 10 male red-footed tortoises. Mean radiographic attenuation values for the hepatic parenchyma were 11.2±3.0 Hounsfield units (HU). Seven red-footed tortoises had values lower than 20 HU, which is compatible with C. carbonaria hepatic lipidosis. These results allowed an early diagnosis of the hepatic changes and suggested corrective measures regarding feeding and management protocols.

77 FR 60981 - TGP Granada, LLC and Roosevelt Wind Ranch, LLC v. Public Service Company of New Mexico, Tortoise...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-05

...; EL12-43-000, EL12-43-001 TGP Granada, LLC and Roosevelt Wind Ranch, LLC v. Public Service Company of New Mexico, Tortoise Capital Resources Corp.; TGP Granada, LLC and Roosevelt Wind Ranch, LLC; Notice... over capacity on the Eastern Interconnection Project. \\1\\ TGP Granada, LLC v. Pub. Serv. Co. of New...

Free-living and captive turtles and tortoises as carriers of new Chlamydia spp.

PubMed Central

Niemczuk, Krzysztof; Zaręba, Kinga; Zając, Magdalena; Laroucau, Karine; Szymańska-Czerwińska, Monika

2017-01-01

A variety of Chlamydia species belonging to the Chlamydiaceae family have been reported in reptilian hosts but scarce data about their occurrence in turtles and tortoises are available. In this study, research was conducted to acquire information on invasive alien species (IAS) of turtles and indigenous turtles and tortoises, living both free and in captivity, as possible reservoirs of Chlamydiaceae. Analysis of specimens (pharyngeal and cloacal swabs and tissues) from 204 turtles and tortoises revealed an overall Chlamydiaceae prevalence of 18.3% and 28.6% among free-living and captive animals respectively, with variable levels of shedding. Further testing conducted with a species-specific real-time PCR and microarray test was unsuccessful. Subsequently sequencing was applied to genotype the Chlamydiaceae-positive samples. Almost the full lengths of the 16S rRNA and ompA genes as well as the 16S-23S intergenic spacer (IGS) and 23S rRNA domain I were obtained for 14, 20 and 8 specimens respectively. Phylogenetic analysis of 16S rRNA amplicons revealed two distinct branches. Group 1 (10 specimens), specific to freshwater turtles and reported here for the first time, was most closely related to Chlamydia (C.) pneumoniae strains and the newly described Candidatus C. sanzinia. Group 2 (four specimens), detected in Testudo spp. samples, showed highest homology to C. pecorum strains but formed a separate sub-branch. Finally, molecular analysis conducted on positive samples together with their geographical distribution in places distant from each other strongly suggest that Group 1 specimens correspond to a new species in the Chlamydiaceae family. In-depth studies of Chlamydia spp. from turtles and tortoises are needed to further characterise these atypical strains and address arising questions about their pathogenicity and zoonotic potential. PMID:28950002

Tortoises as a dietary supplement: A view from the Middle Pleistocene site of Qesem Cave, Israel

NASA Astrophysics Data System (ADS)

Blasco, Ruth; Rosell, Jordi; Smith, Krister T.; Maul, Lutz Christian; Sañudo, Pablo; Barkai, Ran; Gopher, Avi

2016-02-01

Dietary reconstructions can offer an improved perspective on human capacities of adaptation to the environment. New methodological approaches and analytical techniques have led to a theoretical framework for understanding how human groups used and adapted to their local environment. Faunal remains provide an important potential source of dietary information and allow study of behavioural variation and its evolutionary significance. Interest in determining how hominids filled the gaps in large prey availability with small game or what role small game played in pre-Upper Palaeolithic societies is an area of active research. Some of this work has focused on tortoises because they represent an important combination of edible and non-edible resources that are easy to collect if available. The exploitation of these slow-moving animals features prominently in prey choice models because the low handling costs of these reptiles make up for their small body size. Here, we present new taphonomic data from two tortoise assemblages extracted from the lower sequence of the Middle Pleistocene site of Qesem Cave, Israel (420-300 ka), with the aim of assessing the socio-economic factors that may have led to the inclusion of this type of resource in the human diets. We show that hominid damage on large tortoise specimens from Qesem Cave is not unusual and that evidence such as cut marks, percussion marks and consistent patterns of burning suggests established sequences of processing, including cooking in the shell, defleshing, and direct percussion to access the visceral content. These matters make it possible not only to assess the potential role of tortoises as prey, but also to evaluate collecting behaviour in the resource acquisition systems and eco-social strategies at the Acheulo-Yabrudian Cultural Complex (AYCC) in the southern Levant.

Free-living and captive turtles and tortoises as carriers of new Chlamydia spp.

PubMed

Mitura, Agata; Niemczuk, Krzysztof; Zaręba, Kinga; Zając, Magdalena; Laroucau, Karine; Szymańska-Czerwińska, Monika

2017-01-01

A variety of Chlamydia species belonging to the Chlamydiaceae family have been reported in reptilian hosts but scarce data about their occurrence in turtles and tortoises are available. In this study, research was conducted to acquire information on invasive alien species (IAS) of turtles and indigenous turtles and tortoises, living both free and in captivity, as possible reservoirs of Chlamydiaceae. Analysis of specimens (pharyngeal and cloacal swabs and tissues) from 204 turtles and tortoises revealed an overall Chlamydiaceae prevalence of 18.3% and 28.6% among free-living and captive animals respectively, with variable levels of shedding. Further testing conducted with a species-specific real-time PCR and microarray test was unsuccessful. Subsequently sequencing was applied to genotype the Chlamydiaceae-positive samples. Almost the full lengths of the 16S rRNA and ompA genes as well as the 16S-23S intergenic spacer (IGS) and 23S rRNA domain I were obtained for 14, 20 and 8 specimens respectively. Phylogenetic analysis of 16S rRNA amplicons revealed two distinct branches. Group 1 (10 specimens), specific to freshwater turtles and reported here for the first time, was most closely related to Chlamydia (C.) pneumoniae strains and the newly described Candidatus C. sanzinia. Group 2 (four specimens), detected in Testudo spp. samples, showed highest homology to C. pecorum strains but formed a separate sub-branch. Finally, molecular analysis conducted on positive samples together with their geographical distribution in places distant from each other strongly suggest that Group 1 specimens correspond to a new species in the Chlamydiaceae family. In-depth studies of Chlamydia spp. from turtles and tortoises are needed to further characterise these atypical strains and address arising questions about their pathogenicity and zoonotic potential.

The welfare implications of using exotic tortoises as ecological replacements.

PubMed

Griffiths, Christine J; Zuël, Nicolas; Tatayah, Vikash; Jones, Carl G; Griffiths, Owen; Harris, Stephen

2012-01-01

Ecological replacement involves the introduction of non-native species to habitats beyond their historical range, a factor identified as increasing the risk of failure for translocations. Yet the effectiveness and success of ecological replacement rely in part on the ability of translocatees to adapt, survive and potentially reproduce in a novel environment. We discuss the welfare aspects of translocating captive-reared non-native tortoises, Aldabrachelys gigantea and Astrochelys radiata, to two offshore Mauritian islands, and the costs and success of the projects to date. Because tortoises are long-lived, late-maturing reptiles, we assessed the progress of the translocation by monitoring the survival, health, growth, and breeding by the founders. Between 2000 and 2011, a total of 26 A. gigantea were introduced to Ile aux Aigrettes, and in 2007 twelve sexually immature A. gigantea and twelve male A. radiata were introduced to Round Island, Mauritius. Annual mortality rates were low, with most animals either maintaining or gaining weight. A minimum of 529 hatchlings were produced on Ile aux Aigrettes in 11 years; there was no potential for breeding on Round Island. Project costs were low. We attribute the success of these introductions to the tortoises' generalist diet, habitat requirements, and innate behaviour. Feasibility analyses for ecological replacement and assisted colonisation projects should consider the candidate species' welfare during translocation and in its recipient environment. Our study provides a useful model for how this should be done. In addition to serving as ecological replacements for extinct Mauritian tortoises, we found that releasing small numbers of captive-reared A. gigantea and A. radiata is cost-effective and successful in the short term. The ability to release small numbers of animals is a particularly important attribute for ecological replacement projects since it reduces the potential risk and controversy associated with introducing non-native species.

Tropical ancient DNA reveals relationships of the extinct Bahamian giant tortoise Chelonoidis alburyorum

PubMed Central

Kehlmaier, Christian; Barlow, Axel; Hastings, Alexander K.; Vamberger, Melita; Paijmans, Johanna L. A.; Steadman, David W.; Albury, Nancy A.; Franz, Richard; Hofreiter, Michael

2017-01-01

Ancient DNA of extinct species from the Pleistocene and Holocene has provided valuable evolutionary insights. However, these are largely restricted to mammals and high latitudes because DNA preservation in warm climates is typically poor. In the tropics and subtropics, non-avian reptiles constitute a significant part of the fauna and little is known about the genetics of the many extinct reptiles from tropical islands. We have reconstructed the near-complete mitochondrial genome of an extinct giant tortoise from the Bahamas (Chelonoidis alburyorum) using an approximately 1 000-year-old humerus from a water-filled sinkhole (blue hole) on Great Abaco Island. Phylogenetic and molecular clock analyses place this extinct species as closely related to Galápagos (C. niger complex) and Chaco tortoises (C. chilensis), and provide evidence for repeated overseas dispersal in this tortoise group. The ancestors of extant Chelonoidis species arrived in South America from Africa only after the opening of the Atlantic Ocean and dispersed from there to the Caribbean and the Galápagos Islands. Our results also suggest that the anoxic, thermally buffered environment of blue holes may enhance DNA preservation, and thus are opening a window for better understanding evolution and population history of extinct tropical species, which would likely still exist without human impact. PMID:28077774

Tropical ancient DNA reveals relationships of the extinct Bahamian giant tortoise Chelonoidis alburyorum.

PubMed

Kehlmaier, Christian; Barlow, Axel; Hastings, Alexander K; Vamberger, Melita; Paijmans, Johanna L A; Steadman, David W; Albury, Nancy A; Franz, Richard; Hofreiter, Michael; Fritz, Uwe

2017-01-11

Ancient DNA of extinct species from the Pleistocene and Holocene has provided valuable evolutionary insights. However, these are largely restricted to mammals and high latitudes because DNA preservation in warm climates is typically poor. In the tropics and subtropics, non-avian reptiles constitute a significant part of the fauna and little is known about the genetics of the many extinct reptiles from tropical islands. We have reconstructed the near-complete mitochondrial genome of an extinct giant tortoise from the Bahamas (Chelonoidis alburyorum) using an approximately 1 000-year-old humerus from a water-filled sinkhole (blue hole) on Great Abaco Island. Phylogenetic and molecular clock analyses place this extinct species as closely related to Galápagos (C. niger complex) and Chaco tortoises (C. chilensis), and provide evidence for repeated overseas dispersal in this tortoise group. The ancestors of extant Chelonoidis species arrived in South America from Africa only after the opening of the Atlantic Ocean and dispersed from there to the Caribbean and the Galápagos Islands. Our results also suggest that the anoxic, thermally buffered environment of blue holes may enhance DNA preservation, and thus are opening a window for better understanding evolution and population history of extinct tropical species, which would likely still exist without human impact. © 2017 The Author(s).

Low tortoise abundances in pine forest plantations in forest-shrubland transition areas

PubMed Central

Rodríguez-Caro, Roberto C.; Oedekoven, Cornelia S.; Graciá, Eva; Anadón, José D.; Buckland, Stephen T.; Esteve-Selma, Miguel A.; Martinez, Julia; Giménez, Andrés

2017-01-01

In the transition between Mediterranean forest and the arid subtropical shrublands of the southeastern Iberian Peninsula, humans have transformed habitat since ancient times. Understanding the role of the original mosaic landscapes in wildlife species and the effects of the current changes as pine forest plantations, performed even outside the forest ecological boundaries, are important conservation issues. We studied variation in the density of the endangered spur-thighed tortoise (Testudo graeca) in three areas that include the four most common land types within the species’ range (pine forests, natural shrubs, dryland crop fields, and abandoned crop fields). Tortoise densities were estimated using a two-stage modeling approach with line transect distance sampling. Densities in dryland crop fields, abandoned crop fields and natural shrubs were higher (>6 individuals/ha) than in pine forests (1.25 individuals/ha). We also found large variation in density in the pine forests. Recent pine plantations showed higher densities than mature pine forests where shrub and herbaceous cover was taller and thicker. We hypothesize that mature pine forest might constrain tortoise activity by acting as partial barriers to movements. This issue is relevant for management purposes given that large areas in the tortoise’s range have recently been converted to pine plantations. PMID:28273135

Non-native megaherbivores: the case for novel function to manage plant invasions on islands

PubMed Central

Hansen, Dennis M.

2015-01-01

There is a heated debate about whether all non-native species are ‘guilty until proven innocent’, or whether some should be accepted or even welcomed. Further fanning the flames, I here present a case where introductions of carefully vetted, non-native species could provide a net conservation benefit. On many islands, native megaherbivores (flightless birds, tortoises) recently went extinct. Here, rewilding with carefully selected non-native species as ecological replacements is increasingly considered a solution, reinstating a herbivory regime that largely benefits the native flora. Based on these efforts, I suggest that restoration practitioners working on islands without a history of native megaherbivores that are threatened by invasive plants should consider introducing a non-native island megaherbivore, and that large and giant tortoises are ideal candidates. Such tortoises would be equally useful on islands where eradication of invasive mammals has led to increased problems with invasive plants, or on islands that never had introduced mammalian herbivores, but where invasive plants are a problem. My proposal may seem radical, but the reversibility of using giant tortoises means that nothing is lost from trying, and that indeed much is to be gained. As an easily regulated adaptive management tool, it represents an innovative, hypothesis-driven ‘innocent until proven guilty’ approach. PMID:26194166

The Bonneville Estates Rockshelter rodent fauna and changes in Late Pleistocene-Middle Holocene climates and biogeography in the Northern Bonneville Basin, USA

NASA Astrophysics Data System (ADS)

Schmitt, Dave N.; Lupo, Karen D.

2012-07-01

Excavations at Bonneville Estates Rockshelter, Nevada recovered rodent remains from stratified deposits spanning the past ca. 12,500 14C yr BP (14,800 cal yr BP). Specimens from horizons dating to the late Pleistocene and early Holocene include species adapted to montane and moist and cool habitats, including yellow-bellied marmot (Marmota flaviventris) and bushy-tailed woodrat (Neotoma cinerea). Shortly after 9000 14C BP (10,200 cal yr BP) these mammals became locally extinct, or nearly so, taxonomic diversity declined, and the region became dominated by desert woodrats (Neotoma lepida) and other species well-adapted to xeric, low-elevation settings. The timing and nature of changes in the Bonneville Estates rodent fauna are similar to records reported from nearby Homestead and Camels Back caves and provide corroborative data on terminal Pleistocene-early Holocene environments and mammalian responses to middle Holocene desertification. Moreover, the presence of northern pocket gopher (Thomomys talpoides) at Bonneville Estates adds to a sparse regional record for that species and, similar to Homestead Cave, it appears that the ca. 9500 14C yr BP (10,800 cal yr BP) replacement of the northern pocket gopher by Botta's pocket gopher in the Great Salt Lake Desert vicinity was also in response to climate change.

Studies on the life history and development of Cuterebra polita (Diptera: Cuterebridae) in four species of rodents

USGS Publications Warehouse

Capelle, K.J.

1970-01-01

Cuterebra polita Coquillett is a primary parasite of the pocket gopher, Thomomys talpoides, in the western United States. It also occurs secondarily in other wild rodents that come into close contact with pocket gophers.Field studies disclosed pursuit, mating, and ovipositing at an aggregation site near Monte Cristo, Utah. Eggs were individually attached to fibrous roots suspended from the roof of shallow gopher burrows. This refinement of the host-parasite relationship has not previously been described for other North American cuterebrids.In the laboratory, 3 gravid females produced 186-357 viable eggs; about 85% were induced to hatch or hatched spontaneously after 12 days. Dissection of 1 of the females revealed another 886 eggs, for a total of 1243.Larvae were artificially introduced and developed in deer mice (Peromyscus maniculatus), domestic mice (Mus musculus), hamsters (Mesocricetus auratus), and meadow voles (Microtus montanus). The domestic rabbit (Orystolagus cuniculus) appeared refractory. The rate and success of development in the 4 rodent species was variable, but terminal larval development averaged about 22 days. Warbles appeared after 8 days in the rodents, and the majority of the cysts occurred in the posterior dorsal region.On the basis of larval characteristics, C. polita and C. thomomuris appear to be independent, valid species, though they share a common host.

Acquisition of Resort Property Located in Indian Springs, Nevada, Environmental Assessment

DTIC Science & Technology

2011-12-01

include known desert tortoise or burrowing owl habitat, and it is highly unlikely that either species would be present in the project area due to...redtailed hawk (Buteo jamaicensis), ferruginous hawk (Buteo regalis), and northern harrier (Circus cyaneus). Burrowing owls occur at the northern end of...Species The desert tortoise and burrowing owl are the only special-status plant or animal species known, or likely to occur in the areas subject to

Modeling Climate-Change Effects on Snake Range Extents for Military Land Management

DTIC Science & Technology

2013-09-01

Kirankumar Topudurti and the Director was Dr. Ilker Adiguzel. Special appreciation is owed to Fort Stewart, GA personnel John Macey, Larry Carlile, and...fatalities by intentional killing and motor-vehicle encounters, and loss of tortoise burrows (used as winter shelter) through both dwindling tortoise...numbers and gassing of burrows by rattlesnake hunters (US Fish and Wildlife Service 1982, Stevenson et al. 2003). Since it has a very large home

Desert tortoise annotated bibliography, 1991-2015

USGS Publications Warehouse

Berry, Kristin H.; Lyren, Lisa M.; Mack, Jeremy S.; Brand, L. Arriana; Wood, Dustin A.

2016-03-01

Agassiz’s Desert Tortoise (hereinafter called desert tortoise) is a state- and federally-listed threatened species (U.S. Fish and Wildlife Service, 1990; California Department of Fish and Game, 2015). The first population federally listed as threatened occurred on the Beaver Dam Slope, Utah (U.S. Fish and Wildlife Service, 1980). In 1990, the entire geographic range north and west of the Colorado River was federally listed as threatened (U.S. Fish and Wildlife Service, 1990), with the exception being a small population in northwestern Arizona. The purpose of this annotated bibliography is to support recovery efforts for the species, because populations have continued to decline in spite of designation of critical habitat and publication of a recovery plan (U.S. Fish and Wildlife Service, 1994). For example, between 2005 and 2014, populations in critical habitats declined about 50% (U.S. Fish and Wildlife Service, 2015).

Occurrence and molecular characterization of Cryptosporidium spp. in mammals and reptiles at the Lisbon Zoo.

PubMed

Alves, Margarida; Xiao, Lihua; Lemos, Vanessa; Zhou, Ling; Cama, Vitaliano; da Cunha, Margarida Barão; Matos, Olga; Antunes, Francisco

2005-09-01

The presence of Cryptosporidium parasites in mammals and reptiles kept at the Lisbon Zoo was investigated. A total of 274 stool samples were collected from 100 mammals and 29 reptiles. The species and genotype of the isolates identified by light microscopy were determined by nested PCR and sequence analysis of a fragment of the small subunit rRNA gene. Cryptosporidium oocysts were found in one black wildebeest (Connochaetes gnou), one Prairie bison (Bison bison bison) and in one Indian star tortoise (Geochelone elegans). The PCR and sequence analysis of these three isolates showed that those excreted by the Prairie bison were Cryptosporidium mouse genotype, those from the black wildebeest were from a new Cryptosporidium genotype and those infecting the Indian star tortoise were Cryptosporidium tortoise genotype. The present work reports a new Cryptosporidium genotype in a black wildebeest and the first finding of the Cryptosporidium mouse genotype in a ruminant.

Prevalence of Haemoproteus spp. (Apicomplexa: Haemoproteidae) in tortoises in Brazil and its molecular phylogeny.

PubMed

Martinele, Isabel; Tostes, Raquel; Castro, Rômulo; D'Agosto, Marta

2016-01-01

Captive terrestrial tortoises of the species Chelonoidis carbonaria (n = 17) and Chelonoidis denticulata (n = 37) in the state of Minas Gerais, southeastern Brazil, were examined for hematozoans by using a combination of microscopic and molecular methods. Microscopic examination revealed young intra-erythrocytic forms in blood smears from both species of tortoises. The results of PCR, sequencing, and phylogenetic analysis indicated that these parasites belonged to the Haemoproteus spp., whose observed prevalence was 17.6 % in C. carbonaria and 13.5 % in C. denticulata. Phylogenetic analysis indicated that these sequences formed a clade that was grouped with other sequences of Haemoproteus spp. parasites in birds, separate from the clade formed by Haemoproteus spp. of reptiles. This study expands the information regarding the occurrence and distribution of hemosporidia in turtles and is the first study of blood parasites in C. carbonaria.

Exploring conservation discourses in the Galapagos Islands: A case study of the Galapagos giant tortoises.

PubMed

Benitez-Capistros, Francisco; Hugé, Jean; Dahdouh-Guebas, Farid; Koedam, Nico

2016-10-01

Conservation discourses change rapidly both at global and local scales. To be able to capture these shifts and the relationships between humans and nature, we focused on a local and iconic conservation case: the Galapagos giant tortoises (Chelonoidis spp.). We used the Q methodology to contextualize conservation for science and decision making and to explore the multidimensionality of the conservation concept in Galapagos. The results indicate four prevailing discourses: (1) Multi-actor governance; (2) giant tortoise and ecosystems conservation; (3) community governance; and (4) market and tourism centred. These findings allow us to identify foreseeable points of disagreement, as well as areas of consensus, and to discuss the implication of the findings to address socio-ecological conservation and sustainability challenges. This can help the different involved stakeholders (managers, scientists and local communities) to the design and apply contextualized conservation actions and policies to contribute to a better sustainable management of the archipelago.

Strychnine overdose following ingestion of gopher bait.

PubMed

Lindsey, Tania; O'Hara, Joseph; Irvine, Rebecca; Kerrigan, Sarah

2004-03-01

A 52-year-old male was discovered supine on his bed in a state of early decomposition. Commercial strychnine-treated gopher pellets were found in the home, and suicide notes were present at the scene. Biological fluids and tissues were tested for basic, acidic, and neutral drugs using gas chromatography-mass spectrometry. Concentrations of strychnine in heart and femoral blood were 0.96 and 0.31 mg/L, respectively. Vitreous fluid, bile, urine, liver, and brain specimens contained 0.36 mg/L, 1.17 mg/L, 2.92 mg/L, 4.59 mg/kg, and 0.86 mg/kg strychnine, respectively. No other drugs were detected in any of the samples. The cause of death was attributed to rodenticide poisoning, and the manner of death was suicide.

The whole world put between to shells: The cosmic symbolism of tortoises and turtles.

NASA Astrophysics Data System (ADS)

Rappengluck, M.

Since the Bronze Age turtles and tortoise were related to a cosmic symbolism by ancient cultures in different parts of the world, with a certain concentration in the northern hemisphere. The paper attempts to categorize aspects of the cosmic turtle symbolism, using mainly an ethnoastronomical approach, partly supported by archaeological evidences. As a result a set of concepts can be identified, which are related to cosmologic, cosmogonic, biological and psychological aspects.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parham, James F.; Macey, J. Robert; Papenfuss, Theodore J.

As part of an ongoing project to generate a mitochondrial database for terrestrial tortoises based on museum specimens, the complete mitochondrial genome sequences of 10 species and a {approx}14 kb sequence from an eleventh species are reported. The sampling of the present study emphasizes Mediterranean tortoises (genus Testudo and their close relatives). Our new sequences are aligned, along with those of two testudinoid turtles from GenBank, Chrysemys picta and Mauremys reevesii, yielding an alignment of 14,858 positions, of which 3,238 are parsimony informative. We develop a phylogenetic taxonomy for Testudo and related species based on well-supported, diagnosable clades. Several well-supportedmore » nodes are recovered, including the monophyly of a restricted Testudo, T. kleinmanni + T. marginata (the Chersus clade), and the placement of the enigmatic African pancake tortoise (Malacochersustornieri) within the predominantly Palearctic greater Testudo group (Testudona tax. nov.). Despite the large amount of sequence reported, there is low statistical support for some nodes within Testudona and Sowe do not propose names for those groups. A preliminary and conservative estimation of divergence times implies a late Miocene diversification for the testudonan clade (6-12 million years ago), matching their first appearance in the fossil record. The multi-continental distribution of testudonan turtles can be explained by the establishment of permanent connections between Europe, Africa, and Asia at this time. The arrival of testudonan turtles to Africa occurred after one or more initial tortoise invasions gave rise to the diverse (>25 species) 'Geochelone complex.'Two unusual genomic features are reported for the mtDNA of one tortoise, M. tornieri: (1) nad4 has a shift of reading frame that we suggest is resolved by translational frameshifting of the mRNA on the ribosome during protein synthesis and (2) there are two copies of the control region and trnF, with the latter having experienced multiple nucleotide substitutions in a pattern suggesting that each is being maintained by selection.« less

Genetic studies of freshwater turtle and tortoises: a review of the past 70 years

USGS Publications Warehouse

FitzSimmons, Nancy N.; Hart, Kristen M.

2007-01-01

Powerful molecular techniques have been developed over many decades for resolving genetic relationships, population genetic structure, patterns of gene flow, mating systems, and the amount of genetic diversity in animals. Genetic studies of turtles were among the earliest and the rapid application of new genetic tools and analytical techniques is still apparent in the literature on turtles. At present, of the 198 freshwater turtles and tortoises that are listed as not extinct by the IUCN Red List, 69 species worldwide are listed as endangered or critically endangered, and an additional 56 species are listed as vulnerable. Of the ca. 300 species of the freshwater turtles and tortoises in the world, ca. 42% are considered to be facing a high risk extinction, and there is a need to focus intense conservation attention on these species. This includes a need to (i) assess our current state of knowledge regarding the application of genetics to studies of freshwater turtles and tortoises and (ii) determine future research directions. Here, we review all available published studies for the past 70 years that were written in English and used genetic markers (e.g. karyotypes, allozymes, DNA loci) to better understand the biology of freshwater turtles and tortoises. We review the types of studies conducted in relation to the species studied and quantify the countries where the studies were performed. We rack the changing use of different genetic markers through time and report on studies focused on aspects of molecular evolution within turtle genomes. We address the usefulness of particular genetic markers to answer phylogenetic questions and present data comparing population genetic structure and mating systems across species. We draw specific attention to whether authors have considered issues to turtle conservation in their research or provided new insights that have been translated into recommendations for conservation management.

The effects of Vexar® seedling protectors on the growth and development of lodgepole pine roots

USGS Publications Warehouse

Engeman, Richard M.; Anthony, R. Michael; Krupa, Heather W.; Evans, James

1997-01-01

The effects on the growth and development of lodgepole pine roots from the Vexar® tubes used to protect seedlings from pocket gopher damage were studied in the Targhee National Forest, Idaho and the Deschutes National Forest, Oregon. At each site, Vexar-protected and unprotected seedlings, with and without above-ground gopher damage were examined after six growing seasons for root deformities and growth. Undamaged seedlings exhibited greater growth, reflecting the importance of non-lethal gopher damage as a deterrent to tree growth. Protected seedlings with similar damage history as unprotected seedlings had greater root depth than unprotected seedlings, although unprotected seedlings with no above-ground damage generally had the greatest root weight. In general, the percent of seedlings with root deformities was greater for the unprotected seedlings than for the Vexar-protectd seedlings, although this could be largely due to the greater care required to plant protected seedlings. Acute deformities were more common for unprotected seedlings, whereas root deformities with less severe bending were more common for protected seedlings. The incidence of crossed roots was similar for protected and unprotected seedlings on the Deschutes site, where enough occurrences of this deformity permitted analyses. Protected seedlings were similar in root abundance, root distribution, root size and vigor to the unprotected seedlings, with some indication from the Deshutes study site that root distribution was improved with Vexar protection.

Auto-Gopher: A Wireline Deep Sampler Driven by Piezoelectric Percussive Actuator and EM Rotary Motor

NASA Technical Reports Server (NTRS)

Badescu, Mircea; Ressa, Aaron; Jae Lee, Hyeong; Bar-Cohen, Yoseph; Sherrit, Stewart; Zacny, Kris; Paulsen, Gale L.; Beegle, Luther; Bao, Xiaoqi

2013-01-01

The ability to penetrate subsurfaces and perform sample acquisition at depth of meters may be critical for future NASA in-situ exploration missions to bodies in the solar system, including Mars and Europa. A corer/sampler was developed with the goal of enabling acquisition of samples from depths of several meters where if used on Mars would be beyond the oxidized and sterilized zone. For this purpose, we developed a rotary-hammering coring drill, called Auto-Gopher, which employs a piezoelectric actuated percussive mechanism for breaking formations and an electric motor that rotates the bit to remove the powdered cuttings. This sampler is a wireline mechanism that can be fed into and retrieved from the drilled hole using a winch and a cable. It includes an inchworm anchoring mechanism allowing the drill advancement and weight on bit control without twisting the reeling and power cables. The penetration rate is being optimized by simultaneously activating the percussive and rotary motions of the Auto-Gopher. The percussive mechanism is based on the Ultrasonic/Sonic Drill/Corer (USDC) mechanism that is driven by piezoelectric stack and that was demonstrated to require low axial preload. The design and fabrication of this device were presented in previous publications. This paper presents the results of laboratory and field tests and lessons learned from this development.

Habitat drives dispersal and survival of translocated juvenile desert tortoises

USGS Publications Warehouse

Nafus, Melia G.; Esque, Todd C.; Averill-Murray, Roy C.; Nussear, Kenneth E.; Swaisgood, Ronald R.

2017-01-01

5.Synthesis and applications. Resource managers using translocations as a conservation tool should prioritize acquiring data linking habitat to fitness. In particular, for species that depend on avoiding detection, refuges such as burrows and habitat that improved concealment had notable ability to improve survival and dispersal. Our study on juvenile Mojave desert tortoises showed that refuge availability or the distributions of habitat appropriate for concealment are important considerations for identifying translocation sites for species highly dependent on crypsis, camouflage, or other forms of habitat matching.

Computed tomography imaging of a leopard tortoise (Geochelone pardalis pardalis) with confirmed pulmonary fibrosis: a case report

PubMed Central

2013-01-01

An approximately 20-year-old, female Leopard tortoise (Geochelone pardalis pardalis) was presented with dypsnea, wheezing, anorexia and depression. Whole body radiographs revealed generalized diffuse unstructured ‘interstitial lung pattern’ with thickened pulmonary septae while computed tomography (CT) showed emphysematous lung parenchyma and thickened pulmonary septae bordered by irregular ground-glass opacity with smaller areas of ‘honeycombing’. These imaging findings together with histopathologic findings were compatible with chronic, extensive ‘interstitial’ pulmonary fibrosis. PMID:23618386

Radiotelemetry Study of a Desert Tortoise Population: Sand Hill Training Mea, Marine Corps Air Ground Combat Center, Twentynine Palms, California

DTIC Science & Technology

1998-05-01

shallow caliche burrows. Mojave populations differ genetically ( Lamb et al. 1989), morphologically (Weinstein and Berry 1987), in burrow construction...34 Abstract in The Desert Tortoise Council Symposium (1995d), p 92. Lamb , T., J.C. Avise, and J.W. Gibbons, "Phylogeographic Patterns in Mitochondrial...ATTN: STEWS -EL US Army Envr Hygiene Agency ATTN:HSHB-ME 21010 US Army Environmental Center ATTN: SFIM-AEC 21010-5401 Defense Tech Info Center

Sonoran Desert: Fragile Land of Extremes

USGS Publications Warehouse

Produced and Directed by Wessells, Stephen

2003-01-01

'Sonoran Desert: Fragile Land of Extremes' shows how biologists with the U.S. Geological Survey work with other scientists in an effort to better understand native plants and animals such as desert tortoises, saguaro cacti, and Gila monsters. Much of the program was shot in and around Saguaro National Park near Tucson, Arizona. Genetic detective work, using DNA, focuses on understanding the lives of tortoises. Studies of saguaros over many decades clarify how these amazing plants reproduce and thrive in the desert. Threats from fire, diseases in tortoises, and a growing human population motivate the scientists. Their work to identify how these organisms live and survive is a crucial step for the sound management of biological resources on public lands. This 28-minute program, USGS Open-File Report 03-305, was shot entirely in high definition video and produced by the USGS Western Ecological Research Center and Southwest Biological Science Center; produced and directed by Stephen Wessells, Western Region Office of Communications.

Gopher Goal.

ERIC Educational Resources Information Center

Gilyard, Burl

2002-01-01

Describes the design of the University of Minnesota's expansion of its Gibson-Nagurski Football Complex, which included a new entrance (the Hall of Traditions) and weight-training gym. Includes the floor plan and photographs. (EV)

The importance of physiological ecology in conservation biology

USGS Publications Warehouse

Tracy, C.R.; Nussear, K.E.; Esque, T.C.; Dean-Bradley, K.; DeFalco, L.A.; Castle, K.T.; Zimmerman, L.C.; Espinoza, R.E.; Barber, A.M.

2006-01-01

Many of the threats to the persistence of populations of sensitive species have physiological or pathological mechanisms, and those mechanisms are best understood through the inherently integrative discipline of physiological ecology. The desert tortoise was listed under the Endangered Species Act largely due to a newly recognized upper respiratory disease thought to cause mortality in individuals and severe declines in populations. Numerous hypotheses about the threats to the persistence of desert tortoise populations involve acquisition of nutrients, and its connection to stress and disease. The nutritional wisdom hypothesis posits that animals should forage not for particular food items, but instead, for particular nutrients such as calcium and phosphorus used in building bones. The optimal foraging hypothesis suggests that, in circumstances of resource abundance, tortoises should forage as dietary specialists as a means of maximizing intake of resources. The optimal digestion hypothesis suggests that tortoises should process ingesta in ways that regulate assimilation rate. Finally, the cost-of-switching hypothesis suggests that herbivores, like the desert tortoise, should avoid switching food types to avoid negatively affecting the microbe community responsible for fermenting plants into energy and nutrients. Combining hypotheses into a resource acquisition theory leads to novel predictions that are generally supported by data presented here. Testing hypotheses, and synthesizing test results into a theory, provides a robust scientific alternative to the popular use of untested hypotheses and unanalyzed data to assert the needs of species. The scientific approach should focus on hypotheses concerning anthropogenic modifications of the environment that impact physiological processes ultimately important to population phenomena. We show how measurements of such impacts as nutrient starvation, can cause physiological stress, and that the endocrine mechanisms involved with stress can result in disease. Finally, our new syntheses evince a new hypothesis. Free molecules of the stress hormone corticosterone can inhibit immunity, and the abundance of "free corticosterone" in the blood (thought to be the active form of the hormone) is regulated when the corticosterone molecules combine with binding globulins. The sex hormone, testosterone, combines with the same binding globulin. High levels of testosterone, naturally occurring in the breeding season, may be further enhanced in populations at high densities, and the resulting excess testosterone may compete with binding globulins, thereby releasing corticosterone and reducing immunity to disease. This sequence could result in physiological and pathological phenomena leading to population cycles with a period that would be essentially impossible to observe in desert tortoise. Such cycles could obscure population fluctuations of anthropogenic origin. ?? 2006 The Author(s).

As the raven flies: using genetic data to infer the history of invasive common raven (Corvus corax) populations in the Mojave Desert.

PubMed

Fleischer, Robert C; Boarman, William I; Gonzalez, Elena G; Godinez, Alvaro; Omland, Kevin E; Young, Sarah; Helgen, Lauren; Syed, Gracia; McIntosh, Carl E

2008-01-01

Common raven (Corvus corax) populations in Mojave Desert regions of southern California and Nevada have increased dramatically over the past five decades. This growth has been attributed to increased human development in the region, as ravens have a commensal relationship with humans and feed extensively at landfills and on road-killed wildlife. Ravens, as a partially subsidized predator, also represent a problem for native desert wildlife, in particular threatened desert tortoises (Gopherus agassizii). However, it is unclear whether the more than 15-fold population increase is due to in situ population growth or to immigration from adjacent regions where ravens have been historically common. Ravens were sampled for genetic analysis at several local sites within five major areas: the West Mojave Desert (California), East Mojave Desert (southern Nevada), southern coastal California, northern coastal California (Bay Area), and northern Nevada (Great Basin). Analyses of mtDNA control region sequences reveal an increased frequency of raven 'Holarctic clade' haplotypes from south to north inland, with 'California clade' haplotypes nearly fixed in the California populations. There was significant structuring among regions for mtDNA, with high F(ST) values among sampling regions, especially between the Nevada and California samples. Analyses of eight microsatellite loci reveal a mostly similar pattern of regional population structure, with considerably smaller, but mostly significant, values. The greater mtDNA divergences may be due to lower female dispersal relative to males, lower N(e), or effects of high mutation rates on maximal values of F(ST). Analyses indicate recent population growth in the West Mojave Desert and a bottleneck in the northern California populations. While we cannot rule out in situ population growth as a factor, patterns of movement inferred from our data suggest that the increase in raven populations in the West Mojave Desert resulted from movements from southern California and the Central Valley. Ravens in the East Mojave Desert are more similar to ones from northern Nevada, indicating movement between those regions. If this interpretation of high gene flow into the Mojave Desert is correct, then efforts to manage raven numbers by local control may not be optimally effective.

Environmental Conditions and Threatened and Endangered Species Populations near the Titan, Atlas, and Delta Launch Complexes, Cape Canaveral Air Station

NASA Technical Reports Server (NTRS)

Oddy, Donna M.; Stolen, Eric D.; Schmalzer, Paul A.; Hensley, Melissa A.; Hall, Patrice; Larson, Vickie L.; Turek, Shannon R.

1999-01-01

Launches of Delta, Atlas, and Titan rockets from Cape Canaveral Air Station (CCAS) have potential environmental effects. These could occur from direct impacts of launches or indirectly from habitat alterations. This report summarizes a three-year study (1 995-1 998) characterizing the environment, with particular attention to threatened and endangered species, near Delta, Atlas, and Titan launch facilities. Cape Canaveral has been modified by Air Force development and by 50 years of fire suppression. The dominant vegetation type around the Delta and Atlas launch complexes is coastal oak hammock forest. Oak scrub is the predominant upland vegetation type near the Titan launch complexes. Compositionally, these are coastal scrub communities that has been unburned for > 40 years and have developed into closed canopy, low-stature forests. Herbaceous vegetation around active and inactive facilities, coastal strand and dune vegetation near the Atlantic Ocean, and exotic vegetation in disturbed areas are common. Marsh and estuarine vegetation is most common west of the Titan complexes. Launch effects to vegetation include scorch, acid, and particulate deposition. Discernable, cumulative effects are limited to small areas near the launch complexes. Water quality samples were collected at the Titan, Atlas, and Delta launch complexes in September 1995 (wet season) and January 1996 (dry season). Samples were analyzed for heavy metals, chloride, total organic carbon, calcium, iron, magnesium, sodium, total alkalinity, pH, and conductivity. Differences between fresh, brackish, and saline surface waters were evident. The natural buffering capacity of the environment surrounding the CCAS launch complexes is adequate for neutralizing acid deposition in rainfall and launch deposition. Populations of the Florida Scrub-Jay (Aphelocoma coerulescens), a Federally-listed, threatened species, reside near the launch complexes. Thirty-seven to forty-one scrub-jay territories were located at Titan, Atlas, and Delta launch complexes between 1995 and 1997. No direct impacts to scrub-jays were observed as a result of normal launches. The explosion of the Delta rocket in January 1997 caused direct impacts to the habitat of several scrub-jays families, from fire and debris; however, no scrub-jay mortality was observed. Mortality exceeded reproductive output at all areas over the course of the study. Populations of the southeastern beach mouse (Peromyscus polionotus niveiventris) populations, a Federally listed, threatened species, reside near all the launch complexes. Hurricane Erin and several other tropical storms impacted several areas at the inception of the study in 1995 causing coastal habitat alterations as a result of salt-water intrusion. Both the habitat and the beach mice populations recovered during the course of the study. No direct impacts to southeastern beach mice were observed as a result of normal launch operations. Direct impacts were observed to the habitat as a result of the explosion of the Delta rocket in January 1997. This alteration of the habitat resulted in a shift in use with the mice moving on to the newly burned part of the site. Waterbirds use wetlands and aquatic systems near the launch complexes. Species include the Federally-listed, endangered Wood Stork (Mycferia americana) and several state-listed species of special concern including the Snowy Egret (Egretfa thula fhula), Reddish Egret (Egreffa rufescens rufescens), White Ibis (Eudocimus albus), Roseate Spoonbill (Ajaia ajaja), Tricolored Heron (Egreffa tricolor ruficolis), and Little Blue Heron (Egreffa caerulea). No impacts to these populations resulting from any launch operations were observed. Gopher tortoises (Gopherus polyphemus) also occur around the launch complexes. Most of those observed appeared to be in good condition; however, upper respiratory tract disease is known to occur in the population. Cape Canaveral Air Station, including areas near active launch colexes, remains important habitat for a variety of native plants and animals including threatened and endangered species. Direct negative effects of current launch systems appear limited. Additional monitoring of these populations and habitats is required to determine if subtle, long-term changes are occurring, to determine if new launch systems and facilities cause other effects, and to determine the effects of habitat restoration and management.

Environmental Conditions and Threatened and Endangered Species Populations near the Titain, Atlas, and Delta Launch Complexes, Cape Canaveral Air Station

NASA Technical Reports Server (NTRS)

Oddy, Donna M.; Stolen, Eric D.; Schmalzer, Paul A.; Hensley, Melissa A.; Hall, Patrice; Larson, Vickie L.; Turek, Shannon R.

1999-01-01

Launches of Delta, Atlas, and Titan rockets from Cape Canaveral Air Station (CCAS) have potential environmental effects. These could occur from direct impacts of launches or indirectly from habitat alterations. This report summarizes a three-year study (1995-1998) characterizing the environment, with particular attention to threatened and endangered species, near Delta, Atlas, and Titan launch facilities. Cape Canaveral has been modified by Air Force development and by 50 years of fire suppression. The dominant vegetation type around the Delta and Atlas launch complexes is coastal oak hammock forest. Oak scrub is the predominant upland vegetation type near the Titan launch complexes. Compositionally, these are coastal scrub communities that has been unburned for greater than 40 years and have developed into closed canopy, low-stature forests. Herbaceous vegetation around active and inactive facilities, coastal strand and dune vegetation near the Atlantic Ocean, and exotic vegetation in disturbed areas are common. Marsh and estuarine vegetation is most common west of the Titan complexes. Launch effects to vegetation include scorch, acid, and particulate deposition. Discernable, cumulative effects are limited to small areas near the launch complexes. Water quality samples were collected at the Titan, Atlas, and Delta launch complexes in September 1995 (wet season) and January 1996 (dry season). Samples were analyzed for heavy metals, chloride, total organic carbon, calcium, iron, magnesium, sodium, total alkalinity, pH, and conductivity. Differences between fresh, brackish, and saline surface waters were evident. The natural buffering capacity of the environment surrounding the CCAS launch complexes is adequate for neutralizing acid deposition in rainfall and launch deposition. Populations of the Florida Scrub-Jay (Aphelocoma coerulescens), a Federally- listed, threatened species, reside near the launch complexes. Thirty-seven to forty-one scrub-jay territories were located at Titan, Atlas, and Delta launch complexes between 1995 and 1997. No direct impacts to scrub-jays were observed as a result of normal launches. The explosion of the Delta rocket in January 1997 caused direct impacts to the habitat of several scrub-jays families, from fire and debris; however, no scrub-jay mortality was observed. Mortality exceeded reproductive output at all areas over the course of the study. Populations of the southeastern beach mouse (Peromyscus polionotus niveiventris) populations, a Federally listed, threatened species, reside near all the launch complexes. Hurricane Erin and several other tropical storms impacted several areas at the inception of the study in 1995 causing coastal habitat alterations as a result of salt-water intrusion. Both the habitat and the beach mice populations recovered during the course of the study. No direct impacts to southeastern beach mice were observed as a result of normal launch operations. Direct impacts were observed to the habitat as a result of the explosion of the Delta rocket in January 1997. This alteration of the habitant resulted in a shift in use with the mice moving on to the newly burned part of the site. Waterbirds use wetlands and aquatic systems near the launch complexes. Species include the Federally-listed, endangered Wood Stork (Mycteria americana) and several state-listed species of special concern including the Snowy Egret (Egretta thula thula), Reddish Egret (Egretta rufescens rufescens), White Ibis (Eudocimus albus), Roseate Spoonbill (Ajaia ajaja), Tricolored Heron (Egretta tricolor ruficolis), and Little Blue Heron (Egretta caerulea). No impacts to these populations resulting from any launch operations were observed. Gopher tortoises (Gopherus polyphemus) also occur around the launch complexes. Most of those observed appeared to be in good condition; however, upper respiratory tract disease is known to occur in the population. Cape Canaveral Air Station, including areas near active launch complexes, remains important habitat for a variety of native plants and animals including threatened and endangered species. Direct negative effects of current launch systems appear limited. Additional monitoring of these populations and habitats is required to determine if subtle, long-term changes are occurring, to determine if new launch systems and facilities cause other effects, and to determine the effects of habitat restoration and management.

DNA from the Past Informs Ex Situ Conservation for the Future: An “Extinct” Species of Galápagos Tortoise Identified in Captivity

PubMed Central

Russello, Michael A.; Poulakakis, Nikos; Gibbs, James P.; Tapia, Washington; Benavides, Edgar; Powell, Jeffrey R.; Caccone, Adalgisa

2010-01-01

Background Although not unusual to find captive relicts of species lost in the wild, rarely are presumed extinct species rediscovered outside of their native range. A recent study detected living descendents of an extinct Galápagos tortoise species (Chelonoidis elephantopus) once endemic to Floreana Island on the neighboring island of Isabela. This finding adds to the growing cryptic diversity detected among these species in the wild. There also exists a large number of Galápagos tortoises in captivity of ambiguous origin. The recently accumulated population-level haplotypic and genotypic data now available for C. elephantopus add a critical reference population to the existing database of 11 extant species for investigating the origin of captive individuals of unknown ancestry. Methodology/Findings We reanalyzed mitochondrial DNA control region haplotypes and microsatellite genotypes of 156 captive individuals using an expanded reference database that included all extant Galápagos tortoise species as well as the extinct species from Floreana. Nine individuals (six females and three males) exhibited strong signatures of Floreana ancestry and a high probability of assignment to C. elephantopus as detected by Bayesian assignment and clustering analyses of empirical and simulated data. One male with high assignment probability to C. elephantopus based on microsatellite genotypic data also possessed a “Floreana-like” mitochondrial DNA haplotype. Significance Historical DNA analysis of museum specimens has provided critical spatial and temporal components to ecological, evolutionary, taxonomic and conservation-related research, but rarely has it informed ex situ species recovery efforts. Here, the availability of population-level genotypic data from the extinct C. elephantopus enabled the identification of nine Galápagos tortoise individuals of substantial conservation value that were previously misassigned to extant species of varying conservation status. As all captive individuals of C. elephantopus ancestry currently reside at a centralized breeding facility on Santa Cruz, these findings permit breeding efforts to commence in support of the reestablishment of this extinct species to its native range. PMID:20084268

Steroid levels and reproductive cycle of the Galápagos tortoise, Geochelone nigra, living under seminatural conditions on Santa Cruz Island (Galápagos).

PubMed

Schramm, B G; Casares, M; Lance, V A

1999-04-01

The Galápagos Islands are home to 11 subspecies of large terrestrial tortoises (Geochelone nigra). All Galápagos tortoises are considered endangered and approximately 12,000 animals still exist. Until now, the reproductive cycle of the Galápagos tortoise has been studied only in captive animals, and no data from free-ranging tortoises have been available. During a one-year period, blood samples were collected from male and female G. nigra living under seminatural conditions on Santa Cruz Island, Galápagos. Plasma steroid hormones were measured by radioimmunoassays (RIAs). In males, plasma testosterone and corticosterone increased a few months before the onset of the mating season. Peak levels were observed while most copulations occurred and environmental temperatures were highest. Both testosterone and corticosterone showed low levels during the cold and dry nesting season and high levels during the hot and rainy mating season. In females, testosterone and corticosterone also rose during the hot and rainy mating season. Both hormones peaked during the second half of the mating season and decreased during the cooler dry season. Female estradiol levels increased at the onset of the mating season, reaching the highest level at the peak of the mating season, which coincided with the highest annual temperatures measured. Estradiol slowly decreased within the next months and rapidly dropped at the onset of the nesting season when temperatures decreased. Progesterone levels were high close to the time of ovulation and showed clearly elevated levels at the beginning of the nesting season after some females had laid their first clutch. Progesterone decreased during the nesting season, when ambient temperatures began to decrease, and reached minimal levels in the postbreeding period shortly before the onset of the next mating season. There were significant annual variations in plasma testosterone in both males and females. Plasma corticosterone was generally higher in males than in females and varied throughout the year in both sexes. Copyright 1999 Academic Press.

75 FR 31387 - Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for Mississippi...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-03

... Physiological Requirements Mississippi gopher frog tadpoles eat periphyton (microscopic algae, bacteria, and.... Experiments conducted by Thurgate and Pechmann (2007, pp. 1845-1852) demonstrated the lethal and sublethal...

Comparing Commercial WWW Browsers.

ERIC Educational Resources Information Center

Notess, Greg R.

1995-01-01

Four commercial World Wide Web browsers are evaluated for features such as handling of WWW protocols and different URLs: FTP, Telnet, Gopher and WAIS, and e-mail and news; bookmark capabilities; navigation features; file management; and security support. (JKP)

A population model of the impact of a rodenticide containing strychnine on Great Basin Gophersnakes (Pituophis catenifer deserticola).

PubMed

Bishop, Christine A; Williams, Kathleen E; Kirk, David A; Nantel, Patrick; Reed, Eric; Elliott, John E

2016-09-01

Strychnine is a neurotoxin and an active ingredient in some rodenticides which are placed in burrows to suppress pocket gopher (Thomomys talpoides) populations in range and crop land in western North America. The population level impact was modelled of the use of strychnine-based rodenticides on a non-target snake species, the Great Basin Gophersnake (Pituophis catenifer deserticola), which is a predator of pocket gopher and a Species at Risk in Canada. Using information on population density, demographics, and movement and habitat suitability for the Gophersnake living in an agricultural valley in BC, Canada, we estimated the impact of the poisoning of adult snakes on the long-term population size. To determine the area where Gophersnakes could be exposed to strychnine, we used vendor records of a rodenticide, and quantified the landcover areas of orchards and vineyards where the compound was most commonly applied. GIS analysis determined the areas of overlap between those agricultural lands and suitable habitats used by Gophersnakes. Stage-based population matrix models revealed that in a low density (0.1/ha) population scenario, a diet of one pocket gopher per year wherein 10 % of them carried enough strychnine to kill an adult snake could cause the loss of 2 females annually from the population and this would reduce the population by 35.3 % in 25 years. Under the same dietary exposure, up to 35 females could die per year in a high density (0.4/ha) population which would result in a loss of 50 % of adults in 25 years.

Hurricane Irma's Effects on Dune and Beach Morphology at Matanzas Inlet, Atlantic Coast of North Florida: Impacts and Inhibited Recovery?

NASA Astrophysics Data System (ADS)

Adams, P. N.; Conlin, M. P.; Johnson, H. A.; Paniagua-Arroyave, J. F.; Woo, H. B.; Kelly, B. P.

2017-12-01

During energetic coastal storms, surge from low atmospheric pressure, high wave set-up, and increased wave activity contribute to significant morphologic change within the dune and upper beach environments of barrier island systems. Hurricane Irma made landfall on the southwestern portion of the Florida peninsula, as a category 4 storm on Sept 10th, 2017 and tracked northward along the axis of the Florida peninsula for two days before dissipating over the North American continent. Observations along the North Florida Atlantic coast recorded significant wave heights of nearly 7 m and water levels that exceeded predictions by 2 meters on the early morning of Sept. 11th. At Fort Matanzas National Monument, the dune and upper beach adjacent to Matanzas Inlet experienced landward retreat during the storm, diminishing the acreage of dune and scrub habitat for federally-listed endangered and threatened animal species, including the Anastasia beach mouse, gopher tortoises, and several protected shore birds. Real Time Kinematic (RTK) GPS surveys, conducted prior to the passage of the storm (Sept. 8) and immediately after the storm (Sept. 13) document dune scarp retreat >10 m in places and an average retreat of 7.8 m (+/- 5.2 m) of the 2-m beach contour, attributable to the event, within the study region. Although it is typical to see sedimentary recovery at the base of dunes within weeks following an erosive event of this magnitude, our follow up RTK surveys, two weeks (Sept. 26) and five weeks (Oct. 19) after the storm, document continued dune retreat and upper beach lowering. Subsequent local buoy observations during the offshore passage of Hurricanes Jose, Maria (Sept. 17 and 23, respectively) and several early-season Nor'easters recorded wave heights well above normal (2-3 meters) from the northeast. The lack of recovery may reveal a threshold vulnerability of the system, in which the timing of multiple moderate-to-high wave events, in the aftermath of a land falling-hurricane, produces a long-term morphological response, inhibiting the dune sedimentary system from reestablishing its previous configuration.

Oils and rubber from arid land plants

NASA Astrophysics Data System (ADS)

Johnson, J. D.; Hinman, C. W.

1980-05-01

In this article the economic development potentials of Cucurbita species (buffalo gourd and others), Simmondsia chinensis (jojoba), Euphorbia lathyris (gopher plant), and Parthenium argentatum (guayule) are discussed. All of these plants may become important sources of oils or rubber.

A Workshop on UNIX, Workstations, and Internet Connections.

ERIC Educational Resources Information Center

Vierheller, Timothy R.

1997-01-01

Describes a workshop that introduces participants to the UNIX operating system. Provides an overview of how to access information on the Internet and gain familiarity with Web browsers, file transfer programs, telnet sessions, newsreaders, and Gopher services. (DDR)

Historical DNA analysis reveals living descendants of an extinct species of Galápagos tortoise

PubMed Central

Poulakakis, Nikos; Glaberman, Scott; Russello, Michael; Beheregaray, Luciano B.; Ciofi, Claudio; Powell, Jeffrey R.; Caccone, Adalgisa

2008-01-01

Giant tortoises, a prominent symbol of the Galápagos archipelago, illustrate the influence of geological history and natural selection on the diversification of organisms. Because of heavy human exploitation, 4 of the 15 known species (Geochelone spp.) have disappeared. Charles Darwin himself detailed the intense harvesting of one species, G. elephantopus, which once was endemic to the island of Floreana. This species was believed to have been exterminated within 15 years of Darwin's historic visit to the Galápagos in 1835. The application of modern DNA techniques to museum specimens combined with long-term study of a system creates new opportunities for identifying the living remnants of extinct taxa in the wild. Here, we use mitochondrial DNA and microsatellite data obtained from museum specimens to show that the population on Floreana was evolutionarily distinct from all other Galápagos tortoise populations. It was demonstrated that some living individuals on the nearby island of Isabela are genetically distinct from the rest of the island's inhabitants. Surprisingly, we found that these “non-native” tortoises from Isabela are of recent Floreana ancestry and closely match the genetic data provided by the museum specimens. Thus, we show that the genetic line of G. elephantopus has not been completely extinguished and still exists in an intermixed population on Isabela. With enough individuals to commence a serious captive breeding program, this finding may help reestablish a species that was thought to have gone extinct more than a century ago and illustrates the power of long-term genetic analysis and the critical role of museum specimens in conservation biology. PMID:18809928

Pathogenicity in six Australian reptile species following experimental inoculation with Bohle iridovirus.

PubMed

Ariel, E; Wirth, W; Burgess, G; Scott, J; Owens, L

2015-08-20

Ranaviruses are able to infect multiple species of fish, amphibian and reptile, and some strains are capable of interclass transmission. These numerous potential carriers and reservoir species compound efforts to control and contain infections in cultured and wild populations, and a comprehensive knowledge of susceptible species and life stage is necessary to inform such processes. Here we report on the challenge of 6 water-associated reptiles with Bohle iridovirus (BIV) to investigate its potential pathogenicity in common native reptiles of the aquatic and riparian fauna of northern Queensland, Australia. Adult tortoises Elseya latisternum and Emydura krefftii, snakes Boiga irregularis, Dendrelaphis punctulatus and Amphiesma mairii, and yearling crocodiles Crocodylus johnstoni were exposed via intracoelomic inoculation or co-habitation with infected con-specifics, but none were adversely affected by the challenge conditions applied here. Bohle iridovirus was found to be extremely virulent in hatchling tortoises E. latisternum and E. krefftii via intracoelomic challenge, as demonstrated by distinct lesions in multiple organs associated with specific immunohistochemistry staining and a lethal outcome (10/17) of the challenge. Virus was re-isolated from 2/5 E. latisternum, 4/12 E. krefftii and 1/3 brown tree snakes B. irregularis. Focal necrosis, haemorrhage and infiltration of granulocytes were frequently observed histologically in the pancreas, liver and sub-mucosa of the intestine of challenged tortoise hatchlings. Immunohistochemistry demonstrated the presence of ranavirus antigens in the necrotic lesions and in individual cells of the vascular endothelium, the connective tissue and in granulocytes associated with necrosis or present along serosal surfaces. The outcome of this study confirms hatchling tortoises are susceptible to BIV, thereby adding Australian reptiles to the host range of ranaviruses. Additionally, given that BIV was originally isolated from an amphibian, our study provides additional evidence that interclass transmission of ranavirus may occur in the wild.

The Internet for Educators: A User's Guide.

ERIC Educational Resources Information Center

Monahan, Brian D.; Dharm, Matthew

1995-01-01

Presents a practical guide to use of the Internet. Topics discussed include getting connected; the UNIX operating system; electronic mail; FTP (File Transfer Protocol); Finger; Telnet; Archie; Veronica; Gopher; teacher education; the Yanoff List; and expansion of the Internet. (three references) (LRW)

Introducing Internet Services.

ERIC Educational Resources Information Center

Diaz, Karen R.; And Others

1994-01-01

Four articles describe the usefulness of the Internet to reference librarians and discuss Internet search tools: "Getting Started on the Net" (Karen R. Diaz); "Gopher Searching Using VERONICA" (Lousie McGillis); "How to Use VERONICA To Find Information on the Internet" (Jackie Mardikian); and "The Internet…

The use of classical and operant conditioning in training Aldabra tortoises (Geochelone gigantea), for venipuncture and other, husbandry issues.

PubMed

Weiss, Emily; Wilson, Sandra

2003-01-01

A variety of nonhuman animals in zoo and research settings have been the subjects of classical and operant conditioning techniques. Much of the published work has focused on mammals, husbandry training, and veterinary issues. However, several zoos are training reptiles and birds for similar procedures, but there has been little of this work published. Using positive reinforcement techniques enabled the training of 2 male and 2 female Aldabra tortoises (Geochelone gigantea) to approach a target, hold steady on target, and stretch and hold for venipuncture. This article discusses training techniques, venipuncture sight, and future training.

Atractis thapari (Nematoda, Atractidae) parasitizing Chelonoidis carbonarius and C. denticulatus (Testudinidae) in the state of Piauí, Brazil.

PubMed

Leal, Anangela Ravena da Silva; Freire, Simone Mousinho; Knoff, Marcelo; Gomes, Delir Corrêa; Santos, Jeannie Nascimento Dos; Mendonça, Ivete Lopes de

2018-03-01

Atractis thapari Petter, 1966, an atractid nematode, was collected parasitizing the large intestine of tortoises of the species Chelonoidis carbonarius (Spix, 1824) (Cc) and C. denticulatus (Linnaeus, 1766) (Cd) (Testudinidae) in the Zoobotanical Park of the municipality of Teresina, state of Piauí, Brazil. Taxonomic identification was based on morphological and morphometrical features, and using bright-field and scanning electron microscopy. The present study adds new observations on the morphology of A. thapari, mainly relating to mouth papillae, the excretory pore, deirids, and male and female posterior ends. The parasitic indices of prevalence (P), mean intensity (MI), mean abundance (MA) and range of infection (RI) for A. thapari in these two tortoise species were: P = 100%, MI = 154,667, MA = 154,667, RI = 5,500-588,500 (Cc); P = 100%, MI = 93,639, MA = 93,639, RI = 1,000-224,500 (Cd). This report confirms the occurrence of A. thapari in Neotropical region, South America, Brazil, and extends its occurrences to a new host, the tortoise C. carbonarius. Adjustment of host management with the aim of improving hygiene and health conditions is suggested.

Efficacy of oxfendazole and fenbendazole against tortoise (Testudo hermanni) oxyurids.

PubMed

Giannetto, S; Brianti, E; Poglayen, G; Sorgi, C; Capelli, G; Pennisi, M G; Coci, G

2007-04-01

Thirty-six tortoises (Testudo hermanni) with naturally acquired oxyurids infections were used to assess the anthelmintic efficacy of oxfendazole (Dolthene; Merial) and fenbendazole (Panacur; Hoechst Roussel Vet). Animals were randomly assigned to three groups (A, B, and C) based on sex and weight. Animals in group A (seven males and six females) were orally treated with oxfendazole at dose rate of 66 mg/kg, group B animals (nine males and eight females) were orally treated with fenbendazole at dose rate of 100 mg/kg, and group C animals (three males and three females) were not treated and served as controls. All animals were individually stabled in plexiglas boxes under controlled conditions of temperature, humidity, and light beginning 7 days pretreatment and continuing for the duration of the trial. Individual tortoises feces were examined daily by the McMaster technique and drugs efficacy was assessed by the fecal eggs count reduction (FECR) test. Both drugs showed 100% of FECR. However, oxfendazole reached this level 12 days after treatment, whereas 31 days after treatment were necessary to obtain the same stable result with fenbendazole. The two drugs were well tolerated by all the animals and no adverse reactions were observed after treatment.

Characterization of seasonal reproductive and stress steroid hormones in wild Radiated Tortoises, Astrochelys radiata.

PubMed

Currylow, Andrea F T; Rafeliarisoa, Tsilavo H; Louis, Edward E; Stanford, Craig B; Randrianjafizanaka, Soary T; Chinn, Sarah M; Crocker, Daniel E

2017-11-01

The critically endangered Radiated Tortoise (Astrochelys radiata) is endemic to the southern coastlines of Madagascar. Once common, wild populations of this tortoise have undergone dramatic declines in recent years. Although there have been studies documenting reproductive activities, reproductive physiological parameters are unknown yet may be crucial in the recovery of the species. Over four research seasons in remote field locations native to A. radiata, we surveyed for, radio-tracked, and sampled wild, free ranging tortoises. We sampled and measured stress and reproductive parameters (corticosterone [CORT], testosterone [T], estradiol-17β [E2], and progesterone [P]) in 311 plasma samples from 203 wild A. radiata, capturing their active period. Generally, hormone concentrations were associated with body condition, temperature, and humidity. There was wide variation in CORT that varied monthly and by group. Juvenile tortoises maintained more than twice the mean basal CORT concentrations than either adult sex, with the most dramatic distinctions in the middle of the wet season. For adult sex hormones, the last months of the dry season and into the wet season when ground humidities are low and just begin to rise prior to temperature declines, male T concentrations gradually increased to a peak before returning to near undetectable values into the dry season. We had limited data for T concentrations in females, but found average T concentrations were much lower than in males and positively correlated with larger female home range sizes. For female hormone cycles, E2 also peaked in the early 1/3 of the wet season along with male T, and was followed by an uptick in P which correlates to the putative ovulatory cycle. Females tracked over four years showed variation in patterns of P, indicating that number and frequency of clutches vary. Our results suggest that 1) there is high species plasticity in response to stress; 2) A. radiata reproductive cycling is somewhat dissociated with courtship timing and is instead triggered by environmental cues; and 3) individual female reproductive output is irregular. This study is oone of the first to document and describe multi-year seasonal stress and reproductive hormones in a free-ranging Malagasy chelonian. These data may be used to identify key high-production habitats for conservation, and aide in captive management and reproduction in assurance colonies for species health and survival. Copyright © 2017 Elsevier Inc. All rights reserved.

Internet Business Resources.

ERIC Educational Resources Information Center

Cronin, Mary J.

1993-01-01

Review of major information providers on the Internet that offer business resources focuses on U.S. government, United Nations, and European Community information and suggests sources for keeping current with new information offerings. Electronic bulletin boards, LC MARVEL, university Gophers, and TECnet are described; and access and subscription…

Internet Connections to Mathematics Education.

ERIC Educational Resources Information Center

Day, Roger

1995-01-01

Presents Internet connections appropriate for mathematics education; provides descriptions of ways that mathematics educators can access electronic resources such as e-mail, discussion groups, gopher servers, and transfer of files; and provides hints and examples from classroom connections and professional applications. (18 references) (Author/MKR)

Glossary of Internet Terms.

ERIC Educational Resources Information Center

Microcomputers for Information Management, 1995

1995-01-01

Provides definitions for 71 terms related to the Internet, including Archie, bulletin board system, cyberspace, e-mail (electronic mail), file transfer protocol, gopher, hypertext, integrated services digital network, local area network, listserv, modem, packet switching, server, telnet, UNIX, WAIS (wide area information servers), and World Wide…

An Internet Primer for Community College Administrators.

ERIC Educational Resources Information Center

Brumbaugh, Kenneth E.; McRae, Mary S.

1995-01-01

Provides information designed to assist administrators in utilizing the advanced information technologies available on the Internet. Describes the uses of such elements of the Internet as "e-mail,""ftp (file transfer protocol),""gopher," and "telnet." Indicates that administrators can use the internet to…

A Beginner's Guide to the Internet.

ERIC Educational Resources Information Center

McAdams, Charles A.; Nelson, Mark A.

1995-01-01

Maintains that the Internet offers services and opportunities for music teachers and students. Provides an overview of topics such as electronic mail, File Transfer Protocol (FTP), Gopher, and the World Wide Web (WWW). Includes two lists of music resources available on the Internet. (CFR)

Networking in 1993.

ERIC Educational Resources Information Center

Clement, John; Abrahams, Janice

1994-01-01

Describes the growth and evolution of educational networking including the growth in the number of users; networking tools such as Gopher; Internet information resources; problems; evaluations of network use in education; the evolution of educational communities on the Internet; integrating networks into the process of educational change; and the…

Keeping Up with the Internet.

ERIC Educational Resources Information Center

Dealy, Jacqueline

1994-01-01

Offers instructions and resources for Internet novices wanting to access Internet services. Instructions are offered for connecting to 13 education listservs, 9 electronic journals and newsletters, 3 education databases, 7 Telnet gopher sites, Veronica and Archie search tools, and File Transfer Protocol (FTP). (Contains 16 references.) (SLW)

The Mankato State Graduate Level Internet Course.

ERIC Educational Resources Information Center

Birmingham, Frank R.

1994-01-01

Describes a beginning Internet course at Mankato State University (Minnesota) designed for preservice and inservice school library media professionals and students. The course addresses the following topics: electronic mail; LISTSERVs; news services; gophering; FTP; and telneting. Other skills such as downloading and locating resources are also…

77 FR 73769 - Endangered and Threatened Wildlife and Plants; Listing Four Subspecies of Mazama Pocket Gopher...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-11

... conversion and degradation of habitat, particularly from agricultural and urban development, successional... take prohibitions (at section 9), existing maintenance activities and agricultural practices located on... prohibitions existing maintenance activities and agricultural practices on private lands, including airports...

Teaching internet use to adult learners: The LANL experience

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smith, S.; Comstock, D.

The Research library at Los Alamos National Laboratory has been teaching an Internet class to adult learners since May 1994. The class is a team effort, combining lecture/demo with hands-on practice using Gopher and the World Wide Web. What started out as a small short-term project has become a weekly class available to any Lab employee or associate. More than 250 people have been taught to find basic reference materials and to navigate the Internet on the Gopher and World Wide Web. The class is one of the first classes offered by the Research Library to be filled every month,more » and one Laboratory group has recommended that their staff attend this class in preparation for more advanced Internet and HTML classes as part of their group training. The success of this class spurred development by the Research Library of more specific subject classes using Internet resources, specifically business and general science resources.« less

The Auto-Gopher Deep Drill

NASA Technical Reports Server (NTRS)

Badescu, Mircea

2014-01-01

Subsurface penetration by coring, drilling or abrading is of great importance for a large number of space and earth applications. An Ultrasonic/Sonic Drill/Corer (USDC) has been in development at JPL's Nondestructive Evaluation and Advanced Actuators (NDEAA) lab as an adaptable tool for many of these applications. The USDC uses a novel drive mechanism to transform the high frequency ultrasonic or sonic vibrations of the tip of a horn into a lower frequency sonic hammering of a drill bit through an intermediate free-flying mass. The USDC device idea has been implemented at various scales from handheld drills to large diameter coring devices. A series of computer programs that model the function and performance of the USDC device were developed and were later integrated into an automated modeling package. The USDC has also evolved from a purely hammering drill to a rotary hammer drill as the design requirements increased form small diameter shallow drilling to large diameter deep coring. A synthesis of the Auto-Gopher development is presented in this paper.

Paleobotanical analysis of materials from fossil gopher burrows and upper pleistocene host deposits, the Kolyma River lower reaches

NASA Astrophysics Data System (ADS)

Lopatina, D. A.; Zanina, O. G.

2006-10-01

The comparative analysis of palynomorphs and plant megafossils (fruits, seeds, twigs, leaves) in the Upper Pleistocene host sediments and materials filling in fossil burrows of gophers, their coprolites included, at the Duvannyi Yar, Stanchikovskii Yar and Zelenyi Mys sites of the Kolyma Lowland is carried out. Genera Salix, Lychnis, Silene, Draba, Potentilla, Larix, and families Poaceae, Polygonaceae, Cyperaceae, Compositae, and Leguminosae are determined among palynological remains and megafossils. Factors responsible for qualitative and quantitative differences in taxonomic compositions of palynological and megafossil assemblages are biological peculiarities of plants, different character of fossilization of palynomorphs and large plant remains, geographic conditions, different genesis of assemblages (allochthonous for microfossils and autochthonous for megafossils), and inadequately known morphology of certain spore and pollen taxa. The comprehensive paleobotanical analysis leads to the conclusion that the study region was occupied in the Late Pleistocene by plant communities of humid to somewhat dryer tundra with separate areas of pioneering and steppe vegetation.

Off We Go Cybernetting--Staff Development Makes the Difference.

ERIC Educational Resources Information Center

Joseph, Linda

1995-01-01

Describes how to create a school or district model for an Internet staff development training program for integrating information access skills into the school curriculum. Highlights include instructional design; facility development, including computer workstations; hands-on workshops that include electronic mail, gopher, and downloading;…

Merging the Internet and Hypermedia in the English Language Arts.

ERIC Educational Resources Information Center

Reed, W. Michael; Wells, John G.

1997-01-01

Discussion of hypermedia and computer-mediated communication focuses on a project that merges a language arts Internet resource with a hypermedia-based knowledge construction approach to learning. Highlights include constructing a HyperCard-based program on Shakespeare's "Hamlet," gophers and search engines, downloading, collaborative…

An evaluation of landscape features influecing rodent control by urban residents in California

EPA Science Inventory

As urban areas expand, humans can affect local ecological communities drastically. Perception of local wildlife as “pests” may result in residents purposefully eliminating native wildlife species (e.g., gopher). Animal control efforts also may focus on exotic species that are r...

An Educators' Guide to Information Access across the Internet.

ERIC Educational Resources Information Center

Hazari, Sunil

1994-01-01

A discussion of tools available for use of the Internet, particularly by college and university educators and students, offers information on use of various services, including electronic mailing list servers, data communications protocols for networking, inter-host connections, file transfer protocol, gopher software, bibliographic searching,…

Lineage fusion in Galápagos giant tortoises.

PubMed

Garrick, Ryan C; Benavides, Edgar; Russello, Michael A; Hyseni, Chaz; Edwards, Danielle L; Gibbs, James P; Tapia, Washington; Ciofi, Claudio; Caccone, Adalgisa

2014-11-01

Although many classic radiations on islands are thought to be the result of repeated lineage splitting, the role of past fusion is rarely known because during these events, purebreds are rapidly replaced by a swarm of admixed individuals. Here, we capture lineage fusion in action in a Galápagos giant tortoise species, Chelonoidis becki, from Wolf Volcano (Isabela Island). The long generation time of Galápagos tortoises and dense sampling (841 individuals) of genetic and demographic data were integral in detecting and characterizing this phenomenon. In C. becki, we identified two genetically distinct, morphologically cryptic lineages. Historical reconstructions show that they colonized Wolf Volcano from Santiago Island in two temporally separated events, the first estimated to have occurred ~199 000 years ago. Following arrival of the second wave of colonists, both lineages coexisted for approximately ~53 000 years. Within that time, they began fusing back together, as microsatellite data reveal widespread introgressive hybridization. Interestingly, greater mate selectivity seems to be exhibited by purebred females of one of the lineages. Forward-in-time simulations predict rapid extinction of the early arriving lineage. This study provides a rare example of reticulate evolution in action and underscores the power of population genetics for understanding the past, present and future consequences of evolutionary phenomena associated with lineage fusion. © 2014 John Wiley & Sons Ltd.

Disease dynamics during wildlife translocations: disruptions to the host population and potential consequences for transmission in desert tortoise contact networks

USGS Publications Warehouse

Aiello, Christina M.; Nussear, Kenneth E.; Walde, Andrew D.; Esque, Todd C.; Emblidge, Patrick G.; Sah, Pratha; Bansal, S.; Hudson, Peter J.

2014-01-01

Wildlife managers consider animal translocation a means of increasing the viability of a local population. However, augmentation may disrupt existing resident disease dynamics and initiate an outbreak that would effectively offset any advantages the translocation may have achieved. This paper examines fundamental concepts of disease ecology and identifies the conditions that will increase the likelihood of a disease outbreak following translocation. We highlight the importance of susceptibility to infection, population size and population connectivity – a characteristic likely affected by translocation but not often considered in risk assessments – in estimating outbreak risk due to translocation. We then explore these features in a species of conservation concern often translocated in the presence of infectious disease, the Mojave Desert tortoise, and use data from experimental tortoise translocations to detect changes in population connectivity that may influence pathogen transmission. Preliminary analyses comparing contact networks inferred from spatial data at control and translocation plots and infection simulation results through these networks suggest increased outbreak risk following translocation due to dispersal-driven changes in contact frequency and network structure. We outline future research goals to test these concepts and aid managers in designing effective risk assessment and intervention strategies that will improve translocation success.

Reptiles and amphibians

USGS Publications Warehouse

Lovich, Jeffrey E.; Ennen, Joshua R.; Perrow, Martin

2017-01-01

Summary – We reviewed all the peer-reviewed scientific publications we could find on the known and potential effects of wind farm development, operation, maintenance, and decommissioning on reptiles and amphibians (collectively herpetofauna) worldwide. Both groups are declining globally due to a multitude of threats including energy development. Effect studies were limited to the long-term research by the authors on Agassiz’s Desert Tortoise ecology and behavior at single operational wind farm in California, US and an analysis of the effects of wind farm installation on species richness of vertebrates including reptiles and amphibians in northwestern Portugal. Research on Agassiz’s Desert Tortoise found few demonstrable differences in biological parameters between populations in the wind farm and those in more natural habitats. High reproductive output is due to the regional climate and not to the presence or operation of the wind farm. Site operations have resulted in death and injury to a small number of adult tortoises and over the long-term tortoises now appear to avoid the areas of greatest turbine concentration. Research in Portugal using models and simulations based on empirical data show that vertebrate species richness (including herpetofauna) decreased by almost 20% after the installation of only two large monopole turbines per 250 x 250 m plot. Knowledge of the known responses of herpetofauna to various disturbances allows identification of potential impacts from construction material acquisition in offsite areas, mortality and stress due to impacts of roads and related infrastructure, destruction and modification of habitat, habitat fragmentation and barriers to gene flow, noise, vibration, electromagnetic field generation, heat from buried high voltage transmission lines, alteration of local and regional climate, predator attraction, and increased risk of fire. Research on herpetofauna lags far behind what is needed and, in particular, before-after-control-impact studies are critically needed to identify cause and effect relationships in order to develop effective mitigation strategies for any negative impacts.

The Welfare Implications of Using Exotic Tortoises as Ecological Replacements

PubMed Central

Griffiths, Christine J.; Zuël, Nicolas; Tatayah, Vikash; Jones, Carl G.; Griffiths, Owen; Harris, Stephen

2012-01-01

Background Ecological replacement involves the introduction of non-native species to habitats beyond their historical range, a factor identified as increasing the risk of failure for translocations. Yet the effectiveness and success of ecological replacement rely in part on the ability of translocatees to adapt, survive and potentially reproduce in a novel environment. We discuss the welfare aspects of translocating captive-reared non-native tortoises, Aldabrachelys gigantea and Astrochelys radiata, to two offshore Mauritian islands, and the costs and success of the projects to date. Methodology/Principal Findings Because tortoises are long-lived, late-maturing reptiles, we assessed the progress of the translocation by monitoring the survival, health, growth, and breeding by the founders. Between 2000 and 2011, a total of 26 A. gigantea were introduced to Ile aux Aigrettes, and in 2007 twelve sexually immature A. gigantea and twelve male A. radiata were introduced to Round Island, Mauritius. Annual mortality rates were low, with most animals either maintaining or gaining weight. A minimum of 529 hatchlings were produced on Ile aux Aigrettes in 11 years; there was no potential for breeding on Round Island. Project costs were low. We attribute the success of these introductions to the tortoises’ generalist diet, habitat requirements, and innate behaviour. Conclusions/Significance Feasibility analyses for ecological replacement and assisted colonisation projects should consider the candidate species’ welfare during translocation and in its recipient environment. Our study provides a useful model for how this should be done. In addition to serving as ecological replacements for extinct Mauritian tortoises, we found that releasing small numbers of captive-reared A. gigantea and A. radiata is cost-effective and successful in the short term. The ability to release small numbers of animals is a particularly important attribute for ecological replacement projects since it reduces the potential risk and controversy associated with introducing non-native species. PMID:22724012

Allometric and temporal scaling of movement characteristics in Galapagos tortoises

USGS Publications Warehouse

Bastille-Rousseau, Guillaume; Yackulic, Charles B.; Frair, Jacqueline L.; Cabrera, Freddy; Blake, Stephen

2016-01-01

Understanding how individual movement scales with body size is of fundamental importance in predicting ecological relationships for diverse species. One-dimensional movement metrics scale consistently with body size yet vary over different temporal scales. Knowing how temporal scale influences the relationship between animal body size and movement would better inform hypotheses about the efficiency of foraging behaviour, the ontogeny of energy budgets, and numerous life-history trade-offs.We investigated how the temporal scaling of allometric patterns in movement varies over the course of a year, specifically during periods of motivated (directional and fast movement) and unmotivated (stationary and tortuous movement) behaviour. We focused on a recently diverged group of species that displays wide variation in movement behaviour – giant Galapagos tortoises (Chelonoidis spp.) – to test how movement metrics estimated on a monthly basis scaled with body size.We used state-space modelling to estimate seven different movement metrics of Galapagos tortoises. We used log-log regression of the power law to evaluate allometric scaling for these movement metrics and contrasted relationships by species and sex.Allometric scaling of movement was more apparent during motivated periods of movement. During this period, allometry was revealed at multiple temporal intervals (hourly, daily and monthly), with values observed at daily and monthly intervals corresponding most closely to the expected one-fourth scaling coefficient, albeit with wide credible intervals. We further detected differences in the magnitude of scaling among taxa uncoupled from observed differences in the temporal structuring of their movement rates.Our results indicate that the definition of temporal scales is fundamental to the detection of allometry of movement and should be given more attention in movement studies. Our approach not only provides new conceptual insights into temporal attributes in one-dimensional scaling of movement, but also generates valuable insights into the movement ecology of iconic yet poorly understood Galapagos giant tortoises.

Allometric and temporal scaling of movement characteristics in Galapagos tortoises.

PubMed

Bastille-Rousseau, Guillaume; Yackulic, Charles B; Frair, Jacqueline L; Cabrera, Freddy; Blake, Stephen

2016-09-01

Understanding how individual movement scales with body size is of fundamental importance in predicting ecological relationships for diverse species. One-dimensional movement metrics scale consistently with body size yet vary over different temporal scales. Knowing how temporal scale influences the relationship between animal body size and movement would better inform hypotheses about the efficiency of foraging behaviour, the ontogeny of energy budgets, and numerous life-history trade-offs. We investigated how the temporal scaling of allometric patterns in movement varies over the course of a year, specifically during periods of motivated (directional and fast movement) and unmotivated (stationary and tortuous movement) behaviour. We focused on a recently diverged group of species that displays wide variation in movement behaviour - giant Galapagos tortoises (Chelonoidis spp.) - to test how movement metrics estimated on a monthly basis scaled with body size. We used state-space modelling to estimate seven different movement metrics of Galapagos tortoises. We used log-log regression of the power law to evaluate allometric scaling for these movement metrics and contrasted relationships by species and sex. Allometric scaling of movement was more apparent during motivated periods of movement. During this period, allometry was revealed at multiple temporal intervals (hourly, daily and monthly), with values observed at daily and monthly intervals corresponding most closely to the expected one-fourth scaling coefficient, albeit with wide credible intervals. We further detected differences in the magnitude of scaling among taxa uncoupled from observed differences in the temporal structuring of their movement rates. Our results indicate that the definition of temporal scales is fundamental to the detection of allometry of movement and should be given more attention in movement studies. Our approach not only provides new conceptual insights into temporal attributes in one-dimensional scaling of movement, but also generates valuable insights into the movement ecology of iconic yet poorly understood Galapagos giant tortoises. © 2016 The Authors. Journal of Animal Ecology © 2016 British Ecological Society.

Urban landscape features influencing rodent control and animal movement in two urban areas of California

EPA Science Inventory

“Pest” control of both native (e.g., gophers) and exotic (e.g., black rats, house mice) species may impact populations of non-target species inadvertently. We evaluated relationships among animal movement, rodent control, and landscape features in two urban locations in Californ...

Landscape features influencing residential rodent control and animal movement in two urban areas of California

EPA Science Inventory

Residential “pest” control of both native (e.g., gophers, rabbits) and exotic (e.g., black and Norway rats, house mice) species may impact populations of non-target species inadvertently. We evaluated relationships among animal movement, rodent control, and landscape features in...

Quick Access: Find Statistical Data on the Internet.

ERIC Educational Resources Information Center

Su, Di

1999-01-01

Provides an annotated list of Internet sources (World Wide Web, ftp, and gopher sites) for current and historical statistical business data, including selected interest rates, the Consumer Price Index, the Producer Price Index, foreign currency exchange rates, noon buying rates, per diem rates, the special drawing right, stock quotes, and mutual…

How I Found Out about the Internet.

ERIC Educational Resources Information Center

Pawloski, Bob

1994-01-01

A Nebraska consultant/former teacher explains his role in developing Internet accounts for teachers while working on a wetlands distance-learning project and an arts-education consortium. He explains ARTnet and other Internet services, including Telnet, FTP (file transfer protocol), the Gopher retrieval system, NetNews, and Listservs. Sidebars…

A Guide for Using the Internet.

ERIC Educational Resources Information Center

Brown, Herb

This manual provides an instructional overview of Internet resources with student exercises. The work consists of nine chapters: (1) Introduction to the Internet; (2) How to Access the Internet; (3) Electronic Mail; (4) Gopher; (5) File Transfer Protocol-FTP; (6) Newsgroups & Newsreaders; (7) Telnet & TN3270; (8) World Wide Web; and (9)…

Distance Education: The Technology--What You Need To Know To Succeed, An Overview.

ERIC Educational Resources Information Center

Riedling, Ann M.

1999-01-01

Explores distance-education evolution and research concerning distance-learning formats. Outlines nine mechanisms (electronic-mail, discussion lists/limited conferencing, telnet, FTP/Gopher, WWW, SLIP/PPP, advanced conferencing software, proprietary software vs. open standards, virtual reality) of the Internet which provide for fundamental changes…

The World-Wide Web and Mosaic: An Overview for Librarians.

ERIC Educational Resources Information Center

Morgan, Eric Lease

1994-01-01

Provides an overview of the Internet's World-Wide Web (Web), a hypertext system. Highlights include the client/server model; Uniform Resource Locator; examples of software; Web servers versus Gopher servers; HyperText Markup Language (HTML); converting files; Common Gateway Interface; organizing Web information; and the role of librarians in…

Online Writing Labs (OWLs): A Taxonomy of Options and Issues.

ERIC Educational Resources Information Center

Harris, Muriel; Pemberton, Michael

1995-01-01

Offers an overview and schema for understanding frequently used network technologies available for Online Writing Labs (OWLs)--electronic mail, gopher, World Wide Web, newsgroups, synchronous chat systems, and automated file retrieval systems. Considers ways writing centers' choices among these technologies are impacted by user access, network…

The Internet: A Selective Annotated Bibliography of Print Material.

ERIC Educational Resources Information Center

Giguere, Marlene

1993-01-01

Describes 38 introductory print materials the novice may consult before using the Internet, including guides and directories to resources; general information about the Internet; materials about Internet applications such as electronic mail, remote login, and file transfer; and information about Internet tools such as Archie, Gopher, and WAIS…

Internet Resources on Aging: Parts of the Internet.

ERIC Educational Resources Information Center

Post, Joyce A.

1996-01-01

Provides a brief history of the Internet and a listing of various resources on aging that can be obtained through the Internet. Components of the Internet discussed are electronic-mail applications (listservs, USENET Newsgroups, Bulletin Board Systems, Freenets, and Commercial Services); File Transfer Protocol; Telnet/Remote Login; Gophers; Wide…

77 FR 28799 - Animal Welfare; Retail Pet Stores and Licensing Exemptions

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-16

... as pets are considered retail pet stores: Dogs, cats, rabbits, guinea pigs, hamsters, gerbils, rats... following animals are sold or offered for sale, at retail, for use as pets: Dogs, cats, rabbits, guinea pigs... dogs, cats, birds, rabbits, hamsters, guinea pigs, gophers, domestic ferrets, chinchilla, rats, and...

The Many Faces of the Economic Bulletin Board.

ERIC Educational Resources Information Center

Boettcher, Jennifer

1996-01-01

The Economic Bulletin Board (EBB), a one-stop site for economic statistics and government-sponsored business information, can be accessed on the World Wide Web, gopher, telnet, file transfer protocol, dial-up, and fax. Each access method has advantages and disadvantages related to connections, pricing, depth of access, retrieval, and system…

Cyberspace for the Tenderfoot.

ERIC Educational Resources Information Center

Lemon, Donald K.

1997-01-01

Educators should plug into cyberspace to receive high-quality information, make connections to other people's ideas, and get answers applying to their work and personal interests. The K-12 Admin Listserv responded to a survey the author posted saying that certain features discussed here (web browser, newsgroup, e-mail, listserv, and gopher) were…

Sex-specific ecophysiological responses to environmental fluctuations of free-ranging Hermann's tortoises: implication for conservation.

PubMed

Sibeaux, Adélaïde; Michel, Catherine Louise; Bonnet, Xavier; Caron, Sébastien; Fournière, Kévin; Gagno, Stephane; Ballouard, Jean-Marie

2016-01-01

Physiological parameters provide indicators to evaluate how organisms respond to conservation actions. For example, individuals translocated during reinforcement programmes may not adapt to their novel host environment and may exhibit elevated chronic levels of stress hormones and/or decreasing body condition. Conversely, successful conservation actions should be associated with a lack of detrimental physiological perturbation. However, physiological references fluctuate over time and are influenced by various factors (e.g. sex, age, reproductive status). It is therefore necessary to determine the range of natural variations of the selected physiological metrics to establish useful baselines. This study focuses on endangered free-ranging Hermann's tortoises ( Testudo hermanni hermanni ), where conservation actions have been preconized to prevent extinction of French mainland populations. The influence of sex and of environmental factors (site, year and season) on eight physiological parameters (e.g. body condition, corticosterone concentrations) was assessed in 82 individuals from two populations living in different habitats. Daily displacements were monitored by radio-tracking. Most parameters varied between years and seasons and exhibited contrasting sex patterns but with no or limited effect of site. By combining behavioural and physiological traits, this study provides sex-specific seasonal baselines that can be used to monitor the health status of Hermann's tortoises facing environmental threats (e.g. habitat changes) or during conservation actions (e.g. translocation). These results might also assist in selection of the appropriate season for translocation.

Campylobacter geochelonis sp. nov. isolated from the western Hermann's tortoise (Testudo hermanni hermanni).

PubMed

Piccirillo, Alessandra; Niero, Giulia; Calleros, Lucía; Pérez, Ruben; Naya, Hugo; Iraola, Gregorio

2016-09-01

During a screening study to determine the presence of species of the genus Campylobacter in reptiles, three putative strains (RC7, RC11 and RC20T) were isolated from different individuals of the western Hermann's tortoise (Testudo hermanni hermanni). Initially, these isolates were characterized as representing Campylobacterfetus subsp. fetus by multiplex PCR and partial 16S rRNA gene sequence analysis. Further whole- genome characterization revealed considerable differences compared to other Campylobacter species. A polyphasic study was then undertaken to determine the exact taxonomic position of the isolates. The three strains were characterized by conventional phenotypic tests and whole genome sequencing. We generated robust phylogenies that showed a distinct clade containing only these strains using the 16S rRNA and atpA genes and a set of 40 universal proteins. Our phylogenetic analysis demonstrates their designation as representing a novel species and this was further confirmed using whole- genome average nucleotide identity within the genus Campylobacter (~80 %). Compared to most Campylobacter species, these strains hydrolysed hippurate, and grew well at 25 °C but not at 42 °C. Phenotypic and genetic analyses demonstrate that the three Campylobacter strains isolated from the western Hermann's tortoise represent a novel species within the genus Campylobacter, for which the name Campylobactergeochelonis sp. nov. is proposed, with RC20T (=DSM 102159T=LMG 29375T) as the type strain.

Incorporating population viability models into species status assessment and listing decisions under the U.S. Endangered Species Act

USGS Publications Warehouse

McGowan, Conor P.; Allan, Nathan; Servoss, Jeff; Hedwall, Shaula J.; Wooldridge, Brian

2017-01-01

Assessment of a species' status is a key part of management decision making for endangered and threatened species under the U.S. Endangered Species Act. Predicting the future state of the species is an essential part of species status assessment, and projection models can play an important role in developing predictions. We built a stochastic simulation model that incorporated parametric and environmental uncertainty to predict the probable future status of the Sonoran desert tortoise in the southwestern United States and North Central Mexico. Sonoran desert tortoise was a Candidate species for listing under the Endangered Species Act, and decision makers wanted to use model predictions in their decision making process. The model accounted for future habitat loss and possible effects of climate change induced droughts to predict future population growth rates, abundances, and quasi-extinction probabilities. Our model predicts that the population will likely decline over the next few decades, but there is very low probability of quasi-extinction less than 75 years into the future. Increases in drought frequency and intensity may increase extinction risk for the species. Our model helped decision makers predict and characterize uncertainty about the future status of the species in their listing decision. We incorporated complex ecological processes (e.g., climate change effects on tortoises) in transparent and explicit ways tailored to support decision making processes related to endangered species.

Gateways to State and Local Government Information on the Internet.

ERIC Educational Resources Information Center

Maxwell, Bruce

1995-01-01

Describes some of the most useful gateways that can be used to access state and local government information on the Internet, including StateSearch, Council of State Governments, U.S. House of Representatives Internet Law Library, LC MARVEL, CityNet, California Home Page, and New York State Library Gopher. (LRW)

Vertebrate Pest Control. Sale Publication 4077.

ERIC Educational Resources Information Center

Stimmann, M. W.; Clark, Dell O.

This guide gives descriptions of common vertebrate pests and guidelines for using some common pesticides. The pests discussed are rats, mice, bats, moles, muskrats, ground squirrels, and gophers. Information is given for each pest on the type of damage the pest can do, the habitat and biology of the pest, and the most effective control methods.…

Tools to Ease Your Internet Adventures: Part I.

ERIC Educational Resources Information Center

Descy, Don E.

1993-01-01

This first of a two-part series highlights three tools that improve accessibility to Internet resources: (1) Alex, a database that accesses files in FTP (file transfer protocol) sites; (2) Archie, software that searches for file names with a user's search term; and (3) Gopher, a menu-driven program to access Internet sites. (LRW)

Why You Should Establish a Connection to the Internet.

ERIC Educational Resources Information Center

Hill, Judy A.; Misic, Mark M.

1996-01-01

Provides the rationale for establishing a connection to the Internet. Describes Internet services, including e-mail, telnet, file transfer protocol (FTP), USENET, gopher, Archie, and World Wide Web. Identifies reasons why the Internet is a valuable tool. Outlines steps for establishing a connection and discusses the future of the Internet. A…

Form and Functions: Publishing the Canadian Government "Weekly Checklist" on the Internet.

ERIC Educational Resources Information Center

Davies, Ron; Chalk, Tanis

1996-01-01

When a Canadian government documents listing was distributed over the Internet, differences were revealed in the design and implementation of print, FTP, Gopher and World Wide Web versions. Publishing form was found to affect: ability to provide specific editions for target audiences, amount of information delivered at one time, presentation…

On the Nets. Comparing Web Browsers: Mosaic, Cello, Netscape, WinWeb and InternetWorks Life.

ERIC Educational Resources Information Center

Notess, Greg R.

1995-01-01

World Wide Web browsers are compared by speed, setup, hypertext transport protocol (HTTP) handling, management of file transfer protocol (FTP), telnet, gopher, and wide area information server (WAIS); bookmark options; and communication functions. Netscape has the most features, the fastest retrieval, sophisticated bookmark capabilities. (JMV)

Citing Internet Addresses: A How-To Guide for Referencing Online Sources in Student Bibliographies. Revised.

ERIC Educational Resources Information Center

McClain, Tim

This paper provides easy-to-understand guidelines for citing online information in student bibliographies. Citation structure and examples are provided for each type of Internet source. Guidelines are included for the following Internet sources: electronic mail; Gopher; File Transfer Protocol (FTP); Telnet; World Wide Web; Usenet Newsgroups;…

Adult Literacy, the Internet, and NCAL: An Introduction.

ERIC Educational Resources Information Center

Rethemeyer, R. Karl

This document provides information on two services established on the Internet by the National Center on Adult Literacy (NCAL): electronic mail (e-mail) communication with NCAL and a Gopher server that makes it possible to access and download information, documents, and software relevant to adult literacy. A recent "NCAL Connections" article,…

A Teacher's Project Guide to the Internet.

ERIC Educational Resources Information Center

Crotchett, Kevin R.

This book is a step-by-step guide to the Internet, suggesting creative K-12 classroom projects ranging from one of the most basic Internet functions, e-mail, to one of the more difficult, writing World Wide Web homepages. Intervening chapters describe projects using Usenet Newsgroups, File Transfer Protocols (FTP), Gopher, Veronica, the World Wide…

Co1 DNA supports conspecificity of Geomyphilus pierai and G. barrerai (Coleoptera, Scarabaeidae, Aphodiinae) and is a good marker for their phylogeographic investigation in Mexican mountains

PubMed Central

Arriaga-Jiménez, Alfonsina; Roy, Lise

2015-01-01

Abstract Members of Geomyphilus are associated with rodent burrows, such as pocket gophers and prairie dogs. In Mexico, they are found in the mountains of the Mexican Volcanic Belt and in Sierra Madre Oriental. Our study aims to initiate the exploration of the dispersal modes of Geomyphilus pierai and Geomyphilus barrerai from burrows of pocket gophers. In order to estimate the dispersal scale of the beetles, the utility of mitochondrial and nuclear molecular markers for studying the phylogeographic structure of this complex of species (Geomyphilus pierai and Geomyphilus barrerai) was tested from 49 beetle individuals. High intraspecific and intra-mountain nucleotidic diversity was captured from this sample using Co1 mitochondrial sequences, whilst the ITS2 nuclear ribosomal sequence did not allow observing informative variation. Mitochondrial phylogenetic analysis revealed that the specific delineation between the two species under study was doubtful. In this preliminary study, Co1 was shown to be a good marker for elucidating dispersal routes of the burrowing rodent-associated beetles. PMID:26257561

77 FR 51819 - Endangered Species; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-27

...) Radiated tortoise (Astrochelys radiata) Nile crocodile (Crocodiles niloticus) Salmon-crested cockatoo..., and viable eggs of Masked bobwhite quail (Colinus virginianus ridgwayi), as part of the identified...

Femoral head and neck excision arthroplasty in a leopard tortoise (Stigmochelys pardalis).

PubMed

Naylor, Adam D

2013-12-01

Cases of femoral head and neck excision arthroplasty are infrequently reported in reptiles, and details of surgical technique and clinical outcome in chelonia are lacking. An adult female leopard tortoise (Stigmochelys pardalis) was presented with chronic non-weight-bearing lameness of the left hind limb. Examination and radiography were consistent with coxofemoral luxation, and as a result of the chronic presentation, surgical intervention was recommended. A cranial approach to the joint via the prefemoral fossa afforded good surgical exposure. A depressed lytic acetabular lesion was noted during the procedure, postulated to be a result of abnormal wear from the luxated femoral head. A fiberglass prop was used during recovery to allow extension of the limb without full weight-bearing. Lameness persisted postoperatively, but limb usage significantly improved.

Ecological Monitoring and Compliance Program Fiscal Year 2002 Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

C. A. Wills

2002-12-01

The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Operations Office, monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada (BN) during fiscal year 2002. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance, (3) ecosystem mapping and data management, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species andmore » important biological resources were conducted for 26 NTS projects. These projects have the potential to disturb a total of 374 acres. Thirteen of the projects were in desert tortoise habitat, and 13.38 acres of desert tortoise habitat were disturbed. No tortoises were found in or displaced from project areas, and no tortoises were accidentally injured or killed at project areas or along paved roads. Compilation of historical wildlife data continued this year in efforts to develop faunal distribution maps for the NTS. Photographs associated with the NTS ecological landform units sampled to create the NTS vegetation maps were cataloged for future retrieval and analysis. The list of sensitive plant species for which long-term population monitoring is scheduled was revised. Six vascular plants and five mosses were added to the list. Plant density estimates from ten populations of Astragalus beatleyae were collected, and eight known populations of Eriogonum concinnum were visited to assess plant and habitat status. Minimal field monitoring of western burrowing owl burrows occurred. A report relating to the ecology of the western burrowing owl on the Nevada Test Site was prepared which summarizes four years of data collected on this species' distribution, burrow use, reproduction, activity patterns, and food habits. Bat roost sites within seven buildings slated for demolition were identified, and a BN biologist was a contributing author of the Nevada Bat Conservation Plan published by the Nevada Bat Working Group. Thirty-three adult horses and five foals were counted this year. Six active raptor nests (two American kestrel, two Red-tailed hawk, and two Great-horned owl nests) were found and monitored this year. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. The chemical release test plan for one experiment at the HAZMAT Spill Center on Frenchman Lake playa was reviewed. Seasonal sampling of downwind and upwind transects near the spill center was conducted to document baseline conditions of biota.« less

Ecological Monitoring and Compliance Program Fiscal Year 2002 Report (Part Two of Two)

DOE Office of Scientific and Technical Information (OSTI.GOV)

C. A. Wills

2002-12-01

The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Operations Office, monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada (BN) during fiscal year 2002. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance, (3) ecosystem mapping and data management, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species andmore » important biological resources were conducted for 26 NTS projects. These projects have the potential to disturb a total of 374 acres. Thirteen of the projects were in desert tortoise habitat, and 13.38 acres of desert tortoise habitat were disturbed. No tortoises were found in or displaced from project areas, and no tortoises were accidentally injured or killed at project areas or along paved roads. Compilation of historical wildlife data continued this year in efforts to develop faunal distribution maps for the NTS. Photographs associated with the NTS ecological landform units sampled to create the NTS vegetation maps were cataloged for future retrieval and analysis. The list of sensitive plant species for which long-term population monitoring is scheduled was revised. Six vascular plants and five mosses were added to the list. Plant density estimates from ten populations of Astragalus beatleyae were collected, and eight known populations of Eriogonum concinnum were visited to assess plant and habitat status. Minimal field monitoring of western burrowing owl burrows occurred. A report relating to the ecology of the western burrowing owl on the Nevada Test Site was prepared which summarizes four years of data collected on this species' distribution, burrow use, reproduction, activity patterns, and food habits. Bat roost sites within seven buildings slated for demolition were identified, and a BN biologist was a contributing author of the Nevada Bat Conservation Plan published by the Nevada Bat Working Group. Thirty-three adult horses and five foals were counted this year. Six active raptor nests (two American kestrel, two Red-tailed hawk, and two Great-horned owl nests) were found and monitored this year. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. The chemical release test plan for one experiment at the HAZMAT Spill Center on Frenchman Lake playa was reviewed. Seasonal sampling of downwind and upwind transects near the spill center was conducted to document baseline conditions of biota.« less

The Galapagos.

ERIC Educational Resources Information Center

Schiller, Nancy A.; Herreid, Clyde F.

2000-01-01

Uses a problem-based teaching approach to teach about the geological origins of the Galapagos Islands, colonization, species formation, and threats to biodiversity. Discusses finches, tortoises, and sea cucumbers and provides instructions for student discussions. (YDS)

Global Access to Library of Congress' Digital Resources: National Digital Library and Internet Resources.

ERIC Educational Resources Information Center

Chen, Ching-chih

1996-01-01

Summarizes how the Library of Congress' digital library collections can be accessed globally via the Internet and World Wide Web. Outlines the resources found in each of the various access points: gopher, online catalog, library and legislative Web sites, legal and copyright databases, and FTP (file transfer protocol) sites. (LAM)

Reforestation trials and secondary succession with three levels of overstory shade in the Grand Fir Mosaic ecosystem

Treesearch

Dennis E. Ferguson; John C. Byrne; Dale O. Coffen

2005-01-01

Grand Fir Mosaic habitats are difficult to regenerate because of pocket gophers (Thomomys talpoides) and successional plant communities dominated by bracken fern (Pteridium aquilinum) and western coneflower (Rudbeckia occidentalis). This study tested reforestation practices recommended by previous research, tested hypotheses about the effects of overstory shade on...

77 FR 35117 - Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for Dusky Gopher...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-12

... Service 50 CFR Part 17 Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for...; 4500030114] RIN 1018-AW89 Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for... the area around each breeding pond; and increasing the area of critical habitat beyond the value...

76 FR 59773 - Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for Mississippi...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-09-27

... support a diverse ground cover of herbaceous plants, both in the uplands and in the breeding ponds (Hedman... Service 50 CFR Part 17 Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for... Wildlife and Plants; Designation of Critical Habitat for Mississippi Gopher Frog AGENCY: Fish and Wildlife...

A Guide to Internet Resources in Language Arts.

ERIC Educational Resources Information Center

Homme, John, Comp.; And Others

This paper presents a list of 154 Internet resources (listservs, freenets, telnet sites, gophers, etc.) dealing with language arts. Each entry in the list includes the name of the resource, and subscription and electronic mail addresses. Some of the entries in the list include a brief description of the resource. The paper lists 17 language arts…

Searching Internet Archive Sites with Archie: Why, What, Where, and How.

ERIC Educational Resources Information Center

Simmonds, Curtis

1993-01-01

Describes Archie, an online catalog of electronic holdings of anonymous FTP (File Transfer Protocol) archive sites on the Internet. Accessing Archie through e-mail and using it in a telnet session are discussed. The Internet Gopher and Whatis, which can be used with Archie, are also explained, and search examples are included. (four references)…

76 FR 2293 - Approval and Promulgation of Air Quality Implementation Plans; Minnesota; Gopher Resource, LLC

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-13

... the Minnesota Pollution Control Agency (MPCA) on July 29, 2010, to revise the Minnesota State Implementation Plan (SIP) for lead (Pb) under the Clean Air Act (CAA). The State has submitted a joint Title I... that the conditions laid out with the citation ``Title I Condition: SIP for Lead NAAQS'' replace an...

Environmental Assessment for the Joint Red Flag 󈧉 ADA Activities Nellis Air Force Base

DTIC Science & Technology

2005-03-01

range ratany (Krameria erecta), cheesebush (Hymenoclea salsola), Mormon tea ( Ephedra spp.), and spiny menodora (Menodora spinescens). Four- wing...rattlesnake (Crotalus viridis lutosus), gopher snake (Pituophis melanoleucus), side-blotched lizards (Uta stansburiana) and western whiptails...viscidiflorus Sticky rabbitbrush Chrysothamnus nauseosus Rubber rabbitbrush Coleogyne ramosissima Blackbrush Ephedra sp. Mormon tea JOINT RED FLAG

Prey handling and diet of Louisiana pine snakes (Pituophis ruthveni) and black pine snakes (P. melanoleucus lodingi), with comparisons to other selected colubrid snakes

Treesearch

D. Craig Rudolph; Shirley J. Burgdorf; Richard N. Conner; Christopher S. Collins; Daniel Saenz; Richard R. Schaefer; Toni Trees; C. Michael Duran; Marc Ealy; John G. Himes

2002-01-01

Diet and prey handling behavior were determined for Louisiana pine snakes (Pituophis ruthveni) and black pine snakes (P. melanoleucus lodingi). Louisiana pine snakes prey heavily on Baird's pocket gophers (Geomys breviceps), with which they are sympatric, and exhibit specialized behaviors that facilitate...

42 CFR 71.52 - Turtles, tortoises, and terrapins.

Code of Federal Regulations, 2010 CFR

2010-10-01

... infection of members of the public with Salmonella and Arizona bacteria, and any other information and... of the public with Salmonella and Arizona bacteria and on condition that the holder of the permit...

42 CFR 71.52 - Turtles, tortoises, and terrapins.

Code of Federal Regulations, 2011 CFR

2011-10-01

... infection of members of the public with Salmonella and Arizona bacteria, and any other information and... of the public with Salmonella and Arizona bacteria and on condition that the holder of the permit...

42 CFR 71.52 - Turtles, tortoises, and terrapins.

Code of Federal Regulations, 2012 CFR

2012-10-01

... infection of members of the public with Salmonella and Arizona bacteria, and any other information and... of the public with Salmonella and Arizona bacteria and on condition that the holder of the permit...

42 CFR 71.52 - Turtles, tortoises, and terrapins.

Code of Federal Regulations, 2014 CFR

2014-10-01

... infection of members of the public with Salmonella and Arizona bacteria, and any other information and... of the public with Salmonella and Arizona bacteria and on condition that the holder of the permit...

42 CFR 71.52 - Turtles, tortoises, and terrapins.

Code of Federal Regulations, 2013 CFR

2013-10-01

... infection of members of the public with Salmonella and Arizona bacteria, and any other information and... of the public with Salmonella and Arizona bacteria and on condition that the holder of the permit...

Giant fossil tortoise and freshwater chelid turtle remains from the middle Miocene, Quebrada Honda, Bolivia: Evidence for lower paleoelevations for the southern Altiplano

NASA Astrophysics Data System (ADS)

Cadena, Edwin A.; Anaya, Federico; Croft, Darin A.

2015-12-01

We describe the first Miocene turtle remains from Bolivia, which were collected from the late middle Miocene (13.18-13.03 Ma) of Quebrada Honda, southern Bolivia. This material includes a large scapula-acromion and fragmentary shell elements conferred to the genus Chelonoidis (Testudinidae), and a left xiphiplastron from a pleurodire or side-necked turtle, conferred to Acanthochelys (Chelidae). The occurrence of a giant tortoise and a freshwater turtle suggests that the paleoelevation of the region when the fossils were deposited was lower than has been estimated by stable isotope proxies, with a maximum elevation probably less than 1000 m. At a greater elevation, cool temperatures would have been beyond the tolerable physiological limits for these turtles and other giant ectotherm reptiles.

Ecosystem implications of conserving endemic versus eradicating introduced large herbivores in the Galapagos Archipelago

USGS Publications Warehouse

Bastille-Rousseau, Guillaume; Gibbs, James P.; Campbell, Karl; Yackulic, Charles B.; Blake, Stephen

2017-01-01

Restoration of damaged ecosystems through invasive species removal and native species conservation is an increasingly common practice in biodiversity conservation. Estimating the degree of ecosystem response attributable specifically to eradication of exotic herbivores versus restoration of native herbivores is often difficult and is complicated by concurrent temporal changes in other factors, especially climate. We investigated the interactive impacts of native mega-herbivores (giant tortoises) and the eradication of large alien herbivores (goats) on vegetation productivity across the Galapagos Archipelago. We examined archipelago-wide patterns of Normalized Difference Vegetation Index (NDVI) as a proxy for vegetation productivity between 2001 and 2015 and evaluated how goat and historical and current tortoise occurrence influenced productivity. We used a breakpoint analysis to detect change in trends in productivity from five targeted areas following goat eradication. We found a positive association between tortoise occurrence and vegetation productivity and a negative association with goat occurrence. We also documented an increase in plant productivity following goat removal with recovery higher in moister regions than in arid region, potentially indicating an alternate stable state has been created in the latter. Climate variation also contributed to the detected improvement in productivity following goat eradication, sometimes obscuring the effect of eradication but more usually magnifying it by up to 300%. Our work offers perspectives regarding the effectiveness and outcomes of eradicating introduced herbivores and re-introducing native herbivores, and the merits of staging them simultaneously in order to restore critical ecosystem processes such as vegetation productivity.

HEMATOLOGY AND PLASMA CHEMISTRY OF THE PLOUGHSHARE TORTOISE (ASTROCHELYS YNIPHORA) IN A CAPTIVE BREEDING PROGRAM.

PubMed

López, Javier; Waters, Michael; Routh, Andrew; Rakotonanahary, Tsanta F; Woolaver, Lance; Thomasson, Ann; Holmes, Emma; Steinmetz, Hanspeter W

2017-03-01

Blood samples from 172 captive and 40 wild, healthy, juvenile and adult, ploughshare tortoises ( Astrochelys yniphora ) were analyzed to determine hematological and biochemical reference intervals. Hematological analytes included packed cell volume (PCV), white blood cell count (WBC), and WBC differential estimates. Biochemical analysis included total protein measured by photometry (TP) and by refractometry (TPr), albumin (ALB), creatine kinase (CK), aspartate aminotransferase (AST), glutamate dehydrogenase (GLDH), bile acids (BA), calcium (Ca), phosphorus (P), urea (UREA), and uric acid (UA). The jugular vein was identified as the preferred venipuncture site as subcarapacial vein venipuncture resulted in regular hemodilution. In due consideration of small sample sizes in some of the groups studied, adult tortoises had significantly higher plasma GLDH activity and TPr, TP, ALB, BA, and UREA concentrations and significantly lower AST activity and P concentration than juveniles. Captivity had a significant influence in some reference intervals, with captive adults presenting significantly higher WBC, and estimated counts of all white cell types as well as UREA and TPr than wild counterparts. Captive juveniles also showed significantly higher estimated monocyte and lower estimated eosinophil and basophil counts. Although these differences most likely reflect local environmental or dietary differences, without representing pathology or a deviation from the normal, they question the applicability of reference values from captive animals to wild animals and vice versa. Significant sex differences were only observed for PCV and UA. The reported reference intervals may serve as benchmarks for clinical assessment and conservation of this critically endangered species.

Economic analysis of critical habitat designation for the desert tortoise (Mojave population)

USGS Publications Warehouse

Schamberger, Mel; MacGillvray, Timothy J.; Draper, Dirk D.

1993-01-01

The U.S. Fish and Wildlife Service emergency 1isted the Mojave population of the desert tortoise as endangered on August 4, 1989. The Mojave population formally was listed as threatened on April 2, 1990. The Endangered Species Act of 1973, as amended, requires that the economic benefits and costs and other relevant effects of critical habitat designation be considered. The Secretary of the Interior may exclude from designation areas where the costs of designation are greater than the benefits, unless the exclusion would result in extinction of the species. Desert tortoises are threatened by an accumulation of human-and disease-related mortality accompanied by habitat destruction, degradation, and fragmentation. Many desert tortoises are illegally collected for pets, food, and commercial trade. Others are accidentally struck and killed by vehicles on roads and highways or are killed by gunshot or vehicles traveling off-highway. Raven predation on hatchling desert tortoises has increased as raven populations in the desert have risen. An upper respiratory tract disease is suspected to be a major cause of mortality in the western Mojave Desert. This presumably incurable affliction presumably is thought to be spread through the release of infected tortoises into the desert. The Service has proposed designating critical habitat in nine counties within four states. The 12 critical habitat units encompass 6.4 million acres of land, more than 80% federally owned. This region is economically and demographically diverse. Most of the land is sparsely settled and characterized as a hot desert ecosystem. Major industries in the region include entertainment and lodging (primarily in Las Vegas), property development to accommodate the rapid population growth, and services. Millions of rural acres in the region are leased by the federal government for livestock grazing and used for mining. Overall economic benefits to the affected states derived from cattle and sheep grazing in the hot desert areas are minimal and, according to a recent U.S. General Accounting Office study (1991), local economies do not depend on the grazing of public lands for economic survival. The economic analysis describes the economy in 1990, prior to designation, and estimates the effects of designation. The report estimates those incremental effects attributable to critical habitat designation. Impacts attributable to listing the species were not considered in this analysis. Although critical habitat units have been designated in nine counties, two counties are omitted from the economic analysis because of the small proportion of critical habitat acreage they include. Three key activities (cattle grazing, mineral extraction, and off-road vehicle use) were studied in detail. Even if livestock grazing and commercial off-road racing events were eliminated in the proposed critical habitat units, the potential incremental regional economic impacts would be extremely small. The findings in the report do not include the assumption that mining would be eliminated from critical habitat units, but rather that consultation may result in added mitigation and/or relocation of features. Studies show that society will realize benefits from preservation of species and ecosystems. Survey-based studies confirm that benefits exist and are substantial in size, although these benefits often are not measured in traditional economic markets. The total benefit to society of desert tortoise preservation includes several components. Biodiversity in the Mojave and Colorado Deserts will be improved, some recreation values may increase, and gains in intrinsic value will be realized. Critical habitat designation should result in the loss of fewer than 425 total jobs in the seven counties. These include 340 direct ranching jobs and 85 indirect jobs in other industries. This estimated employment loss will not be permanent for most laborers, it is anticipated that over 85% will be reemployed within two years. The economic consequences of designating critical habitat includes reduced ranch profits in the seven counties of $4,470,000 [the estimated permanent decrease in ranch profits, capitalized at 10% for a 50-year period, in accordance with the methodology of River, et al. (1978)]. Second, the federal government will compensate allottees with a one-time payment estimated at $376,000 for the loss of permanent improvements to grazing lands (pending BLM administrative decisions of partially affected allotments). Finally, discontinuing grazing fees will result in an annual reduction of $170,000 in collected grazing fees that are divided among range improvements, the Federal Treasury, and local governments.

Designing and Implementing a Faculty Internet Workshop: A Collaborative Effort of Academic Computing Services and the University Library.

ERIC Educational Resources Information Center

Bradford, Jane T.; And Others

1996-01-01

Academic Computing Services staff and University librarians at Stetson University (DeLand, Florida) designed and implemented a three-day Internet workshop for interested faculty. The workshop included both hands-on lab sessions and discussions covering e-mail, telnet, ftp, Gopher, and World Wide Web. The planning, preparation of the lab and…

Diel activity patterns of the Louisiana pine snakes (Pituophis ruthveni) in eastern Texas

Treesearch

Marc J. Ealy; Robert R. Fleet; D. Craig Rudolph

2004-01-01

This study examined the diel activity patterns of six Louisiana pine snakes in eastern Texas using radio-telemetry. snakes were monitored for 44 days on two study areas from May to October 1996. Louisana pine snakes were primarily diurnal with moderate crepuscular activity, spending the night within pocket gopher burrows or inactive on the surface. During daylight...

Subsurface ice and brine sampling using an ultrasonic/sonic gopher for life detection and characterization in the McMurdo Dry Valleys

NASA Technical Reports Server (NTRS)

Bar-Cohen, Y.; Sherrit, S.; Chang, Z.; Wessel, L.; Bao, X.; Doran, P. T.; Fritsen, C. H.; Kenig, F.; McKay, C. P.; Murray, A.;

The mechanics of swallowing and the muscular control of diverse behaviours in gopher snakes.

PubMed

Moon, B R

2000-09-01

Snakes are excellent subjects for studying functional versatility and potential constraints because their movements are constrained to vertebral bending and twisting. In many snakes, swallowing is a kind of inside-out locomotion. During swallowing, vertebral bends push food from the jaws along a substantial length of the body to the stomach. In gopher snakes (Pituophis melanoleucus) and king snakes (Lampropeltis getula), swallowing often begins with lateral bending of the head and neck as the jaws advance unilaterally over the prey. Axial movement then shifts to accordion-like, concertina bending as the prey enters the oesophagus. Once the prey is completely engulfed, concertina bending shifts to undulatory bending that pushes the prey to the stomach. The shift from concertina to undulatory bending reflects a shift from pulling the prey into the throat (or advancing the mouth over the prey) to pushing it along the oesophagus towards the stomach. Undulatory kinematics and muscular activity patterns are similar in swallowing and undulatory locomotion. However, the distinct mechanical demands of internal versus external force exertion result in different duty factors of muscle activity. Feeding and locomotor movements are thus integral functions of the snake axial system.

Ecological Monitoring and Compliance Program Fiscal Year 2001

DOE Office of Scientific and Technical Information (OSTI.GOV)

C. A. Wills

The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, National Nuclear Security Administration Nevada Operations Office, monitors the ecosystem of the Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada during fiscal year 2001. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance, (3) ecosystem mapping and data management, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species were conductedmore » for 23 NTS projects. Eleven sites were in desert tortoise habitat. These projects have the potential to disturb a total of 588 acres, where 568 acres of disturbance would be off-road driving. No tortoises were found in or displaced from project areas, and no tortoise s were accidentally injured or killed at project areas. One tortoise was crushed by a vehicle on a paved road. A topical report describing the classification of habitat types on the NTS was completed and distributed. The report is the culmination of three years of field vegetation mapping and the analysis of vegetation data from over 1,500 ecological landform units. Compilation of historical wildlife data was initiated. A long-term monitoring plan for important plant species that occur on the NTS was completed. Site-wide monitoring was conducted for the western burrowing owl, bat species of concern, wild horses, and raptor nests. Sixty-nine of 77 known owl burrows were monitored. As in previous years, some owls were present year round on the NTS. An overall decrease in active owl burrows was observed within all three ecoregions (Mojave Desert, Transition, Great Basin Desert) from October through January. An increase in active owl burrows was observed from mid March to early April. A total of 55 juvenile owls was detected from 11 breeding pairs. Pellet analysis of burrowing owls was completed which identified key prey species. A total of 272 bats, representing 10 bat species were captured in mist-nets at water sources in the Great Basin Desert ecoregion. Bats were detected with the Anabat II call-recording system at water sources and selected tunnel and mine entrances. Thirty-seven adult horses and 11 foals were counted this year. Two of the eleven foals observed last year survived to yearlings. Seven active raptor nests were found and monitored this year. These included two Great-horned Owl nests, three Barn Owl nests, and two Red-tailed Hawk nests. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. The chemical spill test plans for four experiments at the HAZMAT Spill Center were reviewed for their potential to impact biota downwind of spills on Frenchman Lake playa.« less

Studies of reproductive output of the desert tortoise at Joshua Tree National Park, the Mojave National Preserve, and comparative sites

USGS Publications Warehouse

Lovich, J.E.; Medica, P.; Avery, H.; Meyer, K.; Bowser, G.; Brown, A.

1999-01-01

The stability of any population is a function of how many young are produced and how many survive to reproduce. Populations with low reproductive output and high mortality will decline until such time as deaths and births are at least balanced. Monitoring populations of sensitive species is particularly important to ensure that conditions do not favor decline or extinction. Turtles, including tortoises, are characterized by life history traits that make them slow to adapt to rapid changes in mortality and habitat alteration. Long life spans (in excess of 50 years), late maturity, and widely variable nest success are traits that allowed turtles to outlive the dinosaurs, but they are poorly adapted for life in the rapidly changing modern world. Increased mortality of young and adults can seriously tip the delicate balance required for turtles to survive.

Genetic Diversity of Cryptosporidium spp. in Captive Reptiles

PubMed Central

Xiao, Lihua; Ryan, Una M.; Graczyk, Thaddeus K.; Limor, Josef; Li, Lixia; Kombert, Mark; Junge, Randy; Sulaiman, Irshad M.; Zhou, Ling; Arrowood, Michael J.; Koudela, Břetislav; Modrý, David; Lal, Altaf A.

2004-01-01

The genetic diversity of Cryptosporidium in reptiles was analyzed by PCR-restriction fragment length polymorphism and sequence analysis of the small subunit rRNA gene. A total of 123 samples were analyzed, of which 48 snake samples, 24 lizard samples, and 3 tortoise samples were positive for Cryptosporidium. Nine different types of Cryptosporidium were found, including Cryptosporidium serpentis, Cryptosporidium desert monitor genotype, Cryptosporidium muris, Cryptosporidium parvum bovine and mouse genotypes, one C. serpentis-like parasite in a lizard, two new Cryptosporidium spp. in snakes, and one new Cryptosporidium sp. in tortoises. C. serpentis and the desert monitor genotype were the most common parasites and were found in both snakes and lizards, whereas the C. muris and C. parvum parasites detected were probably the result of ingestion of infected rodents. Sequence and biologic characterizations indicated that the desert monitor genotype was Cryptosporidium saurophilum. Two host-adapted C. serpentis genotypes were found in snakes and lizards. PMID:14766569

National Library Service of the Library of Congress: New Electronic Information Projects. Part Four of a Four-Part Series.

ERIC Educational Resources Information Center

McNulty, Tom, Ed.

1995-01-01

This final installment of a four-part series on the National Library Service (NLS) examines recently implemented and future projects, with a focus on alternative formats for patrons with disabilities. Discusses LOCIS, the Library of Congress online public access catalog; MARVEL, the Library of Congress gopher; the NLS Web site; and computer disk…

Test Area B-70 Final Range Environmental Assessment, Revision 1

DTIC Science & Technology

2009-06-01

the Sandhills and Open Grassland ecological associations on the Eglin Range, where it excavates a tunnel -like burrow for shelter from climatic extremes...Sciurus niger Gallberry Ilex glabra Least Shrew Cryptotis parva Gopher Apple Licania michauxii Cottontail Rabbit Sylvilagus floridanus Sand Blackberry ...within the Sandhills and Open Grassland ecological associations on Eglin, where it excavates a tunnel - like burrow for shelter from climatic extremes and

Environmental Assessment for Proposed Security Forces Operations Facility, Buckley Air Force Base, Colorado

DTIC Science & Technology

2006-07-01

Colorado blue spruce (Picea pungens), ponderosa pine (Pinus ponderosa), Siberian elm (Ulmus pumila), Gambel oak (Quercus gambelii), and buffalo juniper...pine and eight Siberian elm trees planted at the southern end of the site. 3.8.1.2 Impacts This section describes potential impacts to...pocket gopher (Geomys bursarius), thirteen-lined ground squirrel (Spermophilus tridecemlineatus), fox squirrel (Sciurus niger), deer mouse

Test Area C-62 Final Programmatic Environmental Assessment

DTIC Science & Technology

2002-05-01

Sorghastrum nutans), little bluestem (Schizachyrium scoparium) and various forbs. Woody vegetation is dominated by shrubs such as yaupon (Ilex vomitoria...effort, the EPA may intervene without discretion to uphold the intent of the CWA (Hasenstein, 2000). A survey of Midwest states by the Indiana ...bluejack oak), persimmon, live oak, and sand post oak and woody shrubs such as holly (Ilex opaca), dwarf huckleberry (Gaylussacia dumosa), gopher apple

Of parachuting spiders and meat-eating beetles

USGS Publications Warehouse

Booth, W.

1990-01-01

Here and there on the rolling hills of gray volcanic ash around the volcano are clumps of invading fireweed and another pioneer called pearly everlasting. Alder and Willow saplings grow sporadically along the otherwise barren stream courses. Plugs of grass sprout in piles of elk droppings. And deer mic and pocket gophers, the survivialists of the animal world, also have managed to gain foothold. 

Geospatial Technology Applications and Infrastructure in the Biological Resources Division.

DTIC Science & Technology

1998-09-01

Forestry/forest ecology Geography Geology GIS/mapping technologies GPS technology HTML/World Wide Web Information management/transfer JAVA Land...tech- nologies are being used to understand diet selection, habitat use, hibernation behavior, and social interactions of desert tortoises

Non-grazing and gophers lower bulk density and acidity in annual-plant soil

Treesearch

Raymond D. Ratliff; Stanley E. Westfall

1971-01-01

The effects of non-grazing on Ahwahnee coarse sandy loam were studied at the San Joaquin Experimental Range in central California. An exclosure, on which there had been no livestock grazing for 34 years, had a lower surface bulk density and lower acidity than an adjacent range that had been grazed. Bulk density averaged 1.08 gm./cc. on the ungrazed range, and 1.43 gm./...

Naturally rare versus newly rare: demographic inferences on two timescales inform conservation of Galápagos giant tortoises

PubMed Central

Garrick, Ryan C; Kajdacsi, Brittney; Russello, Michael A; Benavides, Edgar; Hyseni, Chaz; Gibbs, James P; Tapia, Washington; Caccone, Adalgisa

2015-01-01

Long-term population history can influence the genetic effects of recent bottlenecks. Therefore, for threatened or endangered species, an understanding of the past is relevant when formulating conservation strategies. Levels of variation at neutral markers have been useful for estimating local effective population sizes (Ne) and inferring whether population sizes increased or decreased over time. Furthermore, analyses of genotypic, allelic frequency, and phylogenetic information can potentially be used to separate historical from recent demographic changes. For 15 populations of Galápagos giant tortoises (Chelonoidis sp.), we used 12 microsatellite loci and DNA sequences from the mitochondrial control region and a nuclear intron, to reconstruct demographic history on shallow (past ∽100 generations, ∽2500 years) and deep (pre-Holocene, >10 thousand years ago) timescales. At the deep timescale, three populations showed strong signals of growth, but with different magnitudes and timing, indicating different underlying causes. Furthermore, estimated historical Ne of populations across the archipelago showed no correlation with island age or size, underscoring the complexity of predicting demographic history a priori. At the shallow timescale, all populations carried some signature of a genetic bottleneck, and for 12 populations, point estimates of contemporary Ne were very small (i.e., < 50). On the basis of the comparison of these genetic estimates with published census size data, Ne generally represented ∽0.16 of the census size. However, the variance in this ratio across populations was considerable. Overall, our data suggest that idiosyncratic and geographically localized forces shaped the demographic history of tortoise populations. Furthermore, from a conservation perspective, the separation of demographic events occurring on shallow versus deep timescales permits the identification of naturally rare versus newly rare populations; this distinction should facilitate prioritization of management action. PMID:25691990

Application of Maxent Multivariate Analysis to Define Reptile Species Distributions and Changes Related to Climate Change

DTIC Science & Technology

2016-06-01

species of importance to the military, such as birds and gophers. ERDC/CERL TR-16-6 88 References Cited Buhlmann, Kurt A ., Thomas S.B. Akre , John...As a re- sult, it can be shown with a high degree of assurance that the majority of a reptile’s range can be delineated with just a few bioclimatic...the reptiles as a group ............................................... 86 9.2 Recommendations

Maximizing Sampling Efficiency and Minimizing Uncertainty in Presence/Absence Classification of Rare Salamander Populations

DTIC Science & Technology

2008-10-31

of the Apalachicola River drainage. Although this proposed division in classification appears to be generally accepted by the herpetological community...breeding in small forest ponds. Herpetological Review 33(4):275-280. Carle, F. L. and M. R. Strub. 1978. A new method for estimating population size...gopher frogs (Rana capito) and southern leopard frogs (Rana sphenocephala). Journal of Herpetology 42: 97-103. Grevstad, F.S. 2005. Simulating

Access to DNA and protein databases on the Internet.

PubMed

Harper, R

1994-02-01

During the past year, the number of biological databases that can be queried via Internet has dramatically increased. This increase has resulted from the introduction of networking tools, such as Gopher and WAIS, that make it easy for research workers to index databases and make them available for on-line browsing. Biocomputing in the nineties will see the advent of more client/server options for the solution of problems in bioinformatics.

AU-2 Guidelines for Command: A Handbook on the Leadership of People for Air Force Commanders and Supervisors

DTIC Science & Technology

1995-05-01

networks at thousands of sites in many countries and at thousands of business , government, research , and educational organizations. For many Internet users...medium of communications for academic and research and development communications. This is also true for a significant portion of the business ...thousands of business , government, research , and educational organizations. • The file transfer protocol, Gopher, Telnet, and the wide-area information

Air Force Materiel Command Readiness Training Center Final Environmental Assessment

DTIC Science & Technology

2003-05-01

provision of specific habitat variables. As an example, the ivory -billed woodpecker (Campephilus principalis) that once flourished in bottomland...due to poaching and loss of fire-dependent habitat (U. S. Air Force, 1995). Many associate species use or are dependent on tortoise burrows for

The tortoise and the hare: Reducing resource availability shifts competitive balance between plant species

Treesearch

Dean E. Pearson; Yvette K. Ortega; John L. Maron

2017-01-01

Determining how changes in abiotic conditions influence community interactions is a fundamental challenge in ecology. Meeting this challenge is increasingly imperative in the Anthropocene where climate change and exotic species introductions alter abiotic context and biotic composition to reshuffle natural systems.

Nature Photography - Tortoise

NASA Image and Video Library

2016-12-13

A turtle lumbers along on the sand near railroad tracks at NASA's Kennedy Space Center in Florida. The center shares a border with the Merritt Island National Wildlife Refuge. More than 330 native and migratory bird species, 25 mammals, 117 fishes and 65 amphibians and reptiles call Kennedy and the wildlife refuge home.

Nature Photography - Tortoise

NASA Image and Video Library

2016-12-13

A turtle makes its way along the sand near railroad tracks at NASA's Kennedy Space Center in Florida. The center shares a border with the Merritt Island National Wildlife Refuge. More than 330 native and migratory bird species, 25 mammals, 117 fishes and 65 amphibians and reptiles call Kennedy and the wildlife refuge home.

Enemy targeting, trade-offs, and the evolutionary assembly of a tortoise beetle defense arsenal

USDA-ARS?s Scientific Manuscript database

In response to intense enemy selection, immature folivorous insects have evolved elaborate, multi-trait defense arsenals. How enemies foster trait diversification and arsenal assembly depends on which selective mode they impose: whether different enemies select for the same defense or exert conflict...

The Tortoise and the Hare: Less Jogging, More Sprints and Marathons.

ERIC Educational Resources Information Center

Ginsburg, Sigmund G.

1992-01-01

To cope with changing financial and demographic environments, colleges are encouraged to change management strategies. Suggestions are made for policy formation and improved use of human and material resources in the areas of fiscal management, student recruitment, staffing, campus management, academic programing, and links with business,…

21 CFR 1240.62 - Turtles intrastate and interstate requirements.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Turtles intrastate and interstate requirements....62 Turtles intrastate and interstate requirements. (a) Definition. As used in this section the term “turtles” includes all animals commonly known as turtles, tortoises, terrapins, and all other animals of...

21 CFR 1240.62 - Turtles intrastate and interstate requirements.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Turtles intrastate and interstate requirements....62 Turtles intrastate and interstate requirements. (a) Definition. As used in this section the term “turtles” includes all animals commonly known as turtles, tortoises, terrapins, and all other animals of...

Science: What Reptiles Are and Aren't

ERIC Educational Resources Information Center

Axelrod, Gerry S.

1978-01-01

Many children have an enormous fascination for reptiles of all kinds--snakes, turtles, tortoises, crocodiles, alligators and lizards. Whatever the reason for their interest, you can channel the enthusiasm of reptile fans and build the interest of curious students with a few simple activities, e.g., getting acquainted with reptile characteristics…

Ecological Monitoring and Compliance Program Fiscal Year 2000 Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wills, C.A.

2000-12-01

The Ecological Monitoring and Compliance program, funded through the U.S. Department of Energy, Nevada Operations Office, monitors the ecosystem of he Nevada Test Site (NTS) and ensures compliance with laws and regulations pertaining to NTS biota. This report summarizes the program's activities conducted by Bechtel Nevada during fiscal year 2000. Program activities included: (1) biological surveys at proposed construction sites, (2) desert tortoise compliance,(3) ecosystem mapping, (4) sensitive species and unique habitat monitoring, and (5) biological monitoring at the HAZMAT Spill Center. Biological surveys for the presence of sensitive species were conducted for 24 NTS projects. Seventeen sites were inmore » desert tortoise habitat, and six acres of tortoise habitat were documented as being disturbed this year. No tortoises were found in or displaced from project areas, and no tortoises were accidentally injured or killed. A topical report describing the classification of habitat types o n the NTS was completed. The report is the culmination of three years of field vegetation mapping and the analysis of vegetation data from over 1,500 ecological landform units. A long-term monitoring plan for important plant species that occur on the NTS was completed. Sitewide inventories were conducted for the western burrowing owl, bat species of concern, wild horses, raptor nests, and mule deer. Fifty-nine of 69 known owl burrows were monitored. Forty-four of the known burrows are in disturbed habitat. As in previous years, some owls were present year round on the NTS. An overall decrease in active owl burrows was observed within all three ecoregions (Mojave Desert, Transition, Great Basin Desert) from October through January. An increase in active owl burrows was observed from mid-March to early April. A total of 45 juvenile owls was detected from eight breeding pairs. One nest burrow was detected in the Mojave Desert,one in the Great Basin Desert, and six in the Transition ecoregion. Seventy bats, representing four bat species of concern, were captured in mist-nets at water sources in the Great Basin Desert ecoregion. Bats were detected with the Anabat II call-recording system at selected tunnel and mine entrances verifying that some NTS mines and tunnels are used as bat roosts. Thirty-seven adult horses and 11 foals were counted this year. Four of the five foals observed last year have survived to yearlings. A monitoring plan for NTS horses was completed. Six active red-tailed hawk nests and 10 nestling red-tailed hawks were detected this year. Two spotlighting surveys for mule deer were conducted, each over three consecutive nights in October 1999 and August 2000. The mean sighting rate in October was 1.2 deer/10 kilometers (km) and 1.6 deer/10 km in August. Selected wetlands and man-made water sources were monitored for physical parameters and wildlife use. No dead animals were observed this year in any plastic-lined sump. Pahute Mesa Pond was confirmed to have vegetation,hydrology, and soil indicators that qualify the site as a jurisdictional wetland. The chemical spill test plan for one experiment at the HAZMAT Spill Center was reviewed for its potential to impact biota downwind of spills on Frenchman Lake playa.« less

43. MISSISSIPPI, LOWNDES CO. COLUMBUS RAILROAD BRIDGE End of 1st ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

43. MISSISSIPPI, LOWNDES CO. COLUMBUS RAILROAD BRIDGE End of 1st St. S., Columbus, Ms. Copy of photo 1900. Shows 1878 M&O RR bridge. The steamboat, 'Gopher,' in foreground, was an archeological survey vessel from the Franklin Institute in Philadelphia. Published in Art in Mississippi (1901). Credit: Copied from print in Lowndes Co. Public Library by Sarcone Photography, Columbus, Ms. 1978. - Bridges of the Upper Tombigbee River Valley, Columbus, Lowndes County, MS

Decision paths in complex tasks

NASA Technical Reports Server (NTRS)

Galanter, Eugene

1991-01-01

Complex real world action and its prediction and control has escaped analysis by the classical methods of psychological research. The reason is that psychologists have no procedures to parse complex tasks into their constituents. Where such a division can be made, based say on expert judgment, there is no natural scale to measure the positive or negative values of the components. Even if we could assign numbers to task parts, we lack rules i.e., a theory, to combine them into a total task representation. We compare here two plausible theories for the amalgamation of the value of task components. Both of these theories require a numerical representation of motivation, for motivation is the primary variable that guides choice and action in well-learned tasks. We address this problem of motivational quantification and performance prediction by developing psychophysical scales of the desireability or aversiveness of task components based on utility scaling methods (Galanter 1990). We modify methods used originally to scale sensory magnitudes (Stevens and Galanter 1957), and that have been applied recently to the measure of task 'workload' by Gopher and Braune (1984). Our modification uses utility comparison scaling techniques which avoid the unnecessary assumptions made by Gopher and Braune. Formula for the utility of complex tasks based on the theoretical models are used to predict decision and choice of alternate paths to the same goal.

Tropical soda apple (Solanum viarum) mediated competition via induced resistance: Interaction between Gratiana boliviana, Spodoptera exigua and Frankliniella occidentalis

USDA-ARS?s Scientific Manuscript database

Survival assays were conducted with beet armyworm (BAW) Spodoptera exigua (Hübner), a tortoise beetle Gratiana bolivana Spaeth and western flower thrips (WFT) Frankliniella occidentalis (Pergande) on tropical soda apple (TSA) Solanum viarum Dunal, a relative of tomato. Both S. exigua and G. bolivia...

Nature Photography - Tortoise

NASA Image and Video Library

2017-01-04

A large turtle traverses rocky terrain as it heads toward sea oats near a railroad crossing sign at NASA's Kennedy Space Center in Florida. The center shares a border with the Merritt Island National Wildlife Refuge. More than 330 native and migratory bird species, 25 mammals, 117 fishes and 65 amphibians and reptiles call Kennedy and the wildlife refuge home.

75 FR 31747 - Notice of Request for Extension of Approval of an Information Collection; Interstate Movement of...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-04

...] Notice of Request for Extension of Approval of an Information Collection; Interstate Movement of Certain... interstate movement of certain land tortoises. DATES: We will consider all comments that we receive on or... FURTHER INFORMATION CONTACT: For information on regulations for the interstate movement of certain land...

The Hare and the Tortoise: Emphasizing Speed Can Change the Evidence Used to Make Decisions

ERIC Educational Resources Information Center

Rae, Babette; Heathcote, Andrew; Donkin, Chris; Averell, Lee; Brown, Scott

2014-01-01

Decision-makers effortlessly balance the need for urgency against the need for caution. Theoretical and neurophysiological accounts have explained this tradeoff solely in terms of the "quantity" of evidence required to trigger a decision (the "threshold"). This explanation has also been used as a benchmark test for evaluating…

76 FR 53482 - Endangered and Threatened Wildlife and Plants; Notice of Availability of a Revised Recovery Plan...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-26

... a strategic manner; (4) monitor progress toward recovery; (5) conduct applied research and modeling... activities, and additional information has been obtained through research and observation that allows us to... populations. While current research results can lead to predictions about how local tortoise abundance should...

The Tortoise and the Hare Enigma in E-Transformation in Japanese and Korean Higher Education

ERIC Educational Resources Information Center

Latchem, Colin; Jung, Insung; Aoki, Kumiko; Ozkul, Ali Ekrem

2008-01-01

Japan and Korea have highly developed information and communications technology infrastructures and have recently reformed their higher education systems and encouraged e-transformation. However, Japanese universities have not embraced e-learning as wholeheartedly as their Korean counterparts. The paper concludes that this is due to governmental…

Benefits of Job Clubs for Executive Job Seekers: A Tale of Hares and Tortoises

ERIC Educational Resources Information Center

Kondo, Christopher T.

2009-01-01

This qualitative research study compares the experiences of 2 groups of executive job seekers--job club members and nonmembers--through thematic analysis of open-ended interviews. The findings indicated that job club members benefited from group learning, increased accountability, networking opportunities, emotional support, helping other members,…

Chapiniella variabilis (Nematoda) parasitizing Chelonoidis carbonarius and C. denticulatus (Testudinidae) in the state of Piauí.

PubMed

Freire, Simone Mousinho; Leal, Anangela Ravena da Silva; Knoff, Marcelo; Gomes, Delir Corrêa; Santos, Jeannie Nascimento Dos; Giese, Elane Guerreiro; Silva, Reinaldo José da; Mendonça, Ivete Lopes

2017-01-01

Chapiniella variabilis (Chapin, 1924), a strongylid nematode, was collected parasitizing the large intestine of the tortoises Chelonoidis carbonarius (Spix, 1824) (Cc) and C. denticulatus (Linnaeus, 1766) (Cd) in the Zoobotanical Park of the municipality of Teresina, state of Piauí, Brazil. The taxonomic identification was based on morphological and morphometric features, using bright-field and scanning electron microscopy. The present study adds new observations on the morphology, mainly relating to the mouth papillae, external and internal leaf-crown elements, excretory pore, deirids and male and female posterior end. The parasitic indices of prevalence (P), mean intensity (MI), mean abundance (MA) and range of infection (RI) of C. variabilis in these two tortoise species were: P = 100%, MI = 833.3, MA = 833.3, RI = 500-1,500 (Cc); P = 100%, MI = 472.2, MA = 472.2, RI = 333-500 (Cd). This record expands occurrences of C. variabilis to a new host, C. carbonarius, and to another state in Brazil, in the Neotropical region of South America. Adjustment to host management with the aim of improving hygiene and health conditions is suggested.

Distribution of paw preference in mongrel and tortoise-shell cats and the relation of hemispheric weight to paw preference: sexual dimorphism in paw use and its relation to hemispheric weight.

PubMed

Tan, U

1993-06-01

The distribution of the right minus left (R - L) paw use and its relation to hemispheric weight was studied in tortoise-shell cats. Paw preference was assessed by a food reaching test. All males (N = 9) were left-preferent; females (N = 13) were predominantly right-preferent. There was an inverse relationship between the degree of left-paw preference and the right-brain weight in males (no correlation with left-brain weight). In females, the R - L paw use showed a negative linear correlation with the right- and left-brain weights: the right-pawedness decreased and the left-pawedness increased as the right- and left-brain weights increased. The distributions of the R - L paw use as well as the relationships between brain-weight and pawedness exhibited sexual dimorphism. The results suggest that mainly the genetic and hormonal factors may play an important role in emergence of motor asymmetry in cats. Annett's right shift theory of handedness was also discussed in light of these results.

New tick records in Rondônia, Western Brazilian Amazon.

PubMed

Labruna, Marcelo Bahia; Barbieri, Fábio Silva; Martins, Thiago Fernandes; Brito, Luciana Gatto; Ribeiro, Francisco Dimas Sales

2010-01-01

In the present study, we provide new tick records from Vilhena Municipality, in the Southeast of the State of Rondônia, Northern Brazil. Ticks collected from a capybara, Hydrochoerus hydrochaeris (Linnaeus), were identified as Amblyomma romitii Tonelli-Rondelli (1 female), and Amblyomma sp. (1 larva). Ticks collected from a harpy eagle, Harpia harpyja (Linnaeus), were identified as Amblyomma cajennense (Fabricius) (16 nymphs) and Haemaphysalis juxtakochi Cooley (1 nymph). Ticks collected from a yellow-footed tortoise, Chelonoidis denticulada (Linnaeus), were identified as Amblyomma rotundatum Koch (10 females, 2 nymphs), and Amblyomma sp. (2 larvae). The present record of A. romitii is the first in the State of Rondônia, and represents the southernmost record for this tick species, indicating that its distribution area is much larger than currently recognized. Although both A. cajennense and H. juxtakochi have been reported parasitizing various bird species, we provide the first tick records on a harpy eagle. A. rotundatum is widespread in the State of Rondônia, and has been previously reported on the yellow-footed tortoise. The present records increase the tick fauna of Rondônia to 26 species.

Cultural Resource Survey for the Consolidated Space Operations Center Project Near Colorado Springs, El Paso County, Colorado.

DTIC Science & Technology

1982-01-01

fauna, to attract hunters prehistorically. I But as this area was not prime habitable land for humans, it probably also did not support large herds ...Rocky Mountain areas. The Archaic people were less dependent on herd movement, thus their socio-economic systems changed. This adaptation to a changing...coyotes, skunks, ground squirrels, pocket gophers, wolves, mule deer, white- tail deer, beaver, and porcupine (Larsen 1981; Goodlng 1977:4; Eddy 1981:7

Use of the Internet for educational applications in prosthodontics.

PubMed

van Putten, M C

1996-08-01

Internet is the common term for the information superhighway. The Internet has become a major information resource for educational, governmental, and business institutions. This article reviews the current operation of the Internet as a background for discussing educational opportunities for instruction in prosthodontics. Electronic mail, news groups, file transfer protocol, Gopher, and network navigators are discussed. The use of the World Wide Web for educational purposes by The Ohio State University College of Dentistry Department of Restorative and Prosthetic Dentistry is described.

Earth observations of the Galapagos Islands taken from OV-105 during STS-99.

NASA Image and Video Library

2000-03-28

STS099-753-032 (11-22 February 2000) ---This 70mm photograph, photographed from the Space Shuttle Endeavour, centers on the two westernmost Galapagos Islands--seahorse-shaped Isla Isabela and the smaller round Isla Fernandina to its west. All of the 19 islands in the chain are volcanic in origin, and the craters of several of the shield volcanoes are visible as circular features on each of the islands. The two islands shown in this picture contain the most active volcanoes of the Galapagos. Fernandina last erupted in January-February 1995, with red-hot lava pouring into the sea. After 20 years of inactivity, Cerro Azul on Isla Isabela, last erupted in September-October 1998. Cerro Azul is the southwesternmost volcano on Isla Isabela. At 82 miles long, Isla Isabela is the largest of the islands, and comprises half of the land area of the archipelago. The islands are famous for their unique flora and fauna. Charles Darwin's observations of these species in 1835 contributed to the formation of his ideas on natural selection. Some of the most unique species include flightless cormorants, Galapagos penguins, giant land tortoises, and Galapagos finches. The range of Galapagos penguins is restricted to these western islands where upwelling enriches the ocean productivity, and the adaptation of a typically Antarctic bird family to the equator is an ecological marvel. Giant land tortoises are thought to have the oldest lifespans of any animal on Earth, but, scientists say, they have been driven near to extinction. During the most recent eruption of Cerro Azul, one tortoise was killed and many had to be relocated. The 13 species of Galapagos finches on the islands, although varied in form and lifestyle, are the descendants of an ancestor that happened to colonize this isolated archipelago. The human population of the entire archipelago is about 10,000.

Animal movement in the absence of predation: environmental drivers of movement strategies in a partial migration system

USGS Publications Warehouse

Bastille-Rousseau, Guillaume; Gibbs, James P.; Yackulic, Charles B.; Frair, Jacqueline L.; Cabrera, Fredy; Rousseau, Louis-Philippe

2016-01-01

Animal movement strategies including migration, dispersal, nomadism, and residency are shaped by broad-scale spatial-temporal structuring of the environment, including factors such as the degrees of spatial variation, seasonality and inter-annual predictability. Animal movement strategies, in turn, interact with the characteristics of individuals and the local distribution of resources to determine local patterns of resource selection with complex and poorly understood implications for animal fitness. Here we present a multi-scale investigation of animal movement strategies and resource selection. We consider the degree to which spatial variation, seasonality, and inter-annual predictability in resources drive migration patterns among different taxa and how movement strategies in turn shape local resource selection patterns. We focus on adult Galapagos giant tortoises Chelonoidis spp. as a model system since they display many movement strategies and evolved in the absence of predators of adults. Specifically, our analysis is based on 63 individuals among four taxa tracked on three islands over six years and almost 106 tortoise re-locations. Tortoises displayed a continuum of movement strategies from migration to sedentarism that were linked to the spatio-temporal scale and predictability of resource distributions. Movement strategies shaped patterns of resource selection. Specifically, migratory individuals displayed stronger selection toward areas where resources were more predictable among years than did non-migratory individuals, which indicates a selective advantage for migrants in seasonally structured, more predictable environments. Our analytical framework combines large-scale predictions for movement strategies, based on environmental structuring, with finer-scale analysis of space-use. Integrating different organizational levels of analysis provides a deeper understanding of the eco-evolutionary dynamics at play in the emergence and maintenance of migration and the critical role of resource predictability. Our results highlight that assessing the potential benefits of differential behavioral responses first requires an understanding of the interactions among movement strategies, resource selection and individual characteristics.

Ophthalmic diagnostic tests in captive red-footed tortoises (Chelonoidis carbonaria) in Salvador, northeast Brazil.

PubMed

Oriá, Arianne P; Silva, Renata M Monção; Pinna, Melissa H; Oliveira, Alberto Vinícius D; Ferreira, Paulo Roberto B; Martins Filho, Emanoel F; Meneses, Iris Daniela S; Requião, Kátia G; Ofri, Ron

2015-01-01

The aim of this study was to establish normal ophthalmic parameters for select diagnostic tests in red-footed tortoises (Chelonoides carbonaria). A total of 52 animals, approximately 20-30 years old, were studied. Ophthalmic diagnostic tests included culturing of the normal conjunctival bacterial flora in summer and winter, evaluation of tear production using Schirmer tear test (STT) and endodontic absorbent paper point tear test in two different environmental temperatures (EAPPTT-1 at 32 °C and EAPPTT-2 at 18 °C), cytology of conjunctival cells, B-mode ultrasonography, measurement of palpebral fissure length (PFL), and applanation tonometry (in two different positions). In both seasons, Gram-positive bacteria were predominant. Median (± IQR/2) STT was 12.0 ± 3.5 mm/min, EAPPTT-1 was 15.9 ± 0.7 mm/15 s, and EAPPTT-2 was 15.4 ± 0.4 mm/min (OD) and 17.8 ± 1.0 mm/min (OS). Anterior chamber depth was 1.0 ± 0.1 mm, lens axial length was 2.3 ± 0.1 mm, vitreous chamber depth was 4.3 ± 0.2 mm, and axial globe length was 7.7 ± 0.3 mm. PFL was 11.7 ± 1.7 mm. Intraocular pressure was 11.5 ± 2.8 mmHg for males and 14.0 ± 3.5 mmHg for females (dorsoventral position) and 18.0 ± 3.2 mmHg for males and 24.1 ± 3.0 mmHg for females (ventrodorsal position with inclination of 45°). The ophthalmic parameters reported here can aid in the diagnosis of eye diseases in red-footed tortoises (Chelonoides carbonaria). © 2014 American College of Veterinary Ophthalmologists.

The Genome of a Tortoise Herpesvirus (Testudinid Herpesvirus 3) Has a Novel Structure and Contains a Large Region That Is Not Required for Replication In Vitro or Virulence In Vivo

PubMed Central

Gandar, Frédéric; Wilkie, Gavin S.; Gatherer, Derek; Kerr, Karen; Marlier, Didier; Diez, Marianne; Marschang, Rachel E.; Mast, Jan; Dewals, Benjamin G.

2015-01-01

ABSTRACT Testudinid herpesvirus 3 (TeHV-3) is the causative agent of a lethal disease affecting several tortoise species. The threat that this virus poses to endangered animals is focusing efforts on characterizing its properties, in order to enable the development of prophylactic methods. We have sequenced the genomes of the two most studied TeHV-3 strains (1976 and 4295). TeHV-3 strain 1976 has a novel genome structure and is most closely related to a turtle herpesvirus, thus supporting its classification into genus Scutavirus, subfamily Alphaherpesvirinae, family Herpesviridae. The sequence of strain 1976 also revealed viral counterparts of cellular interleukin-10 and semaphorin, which have not been described previously in members of subfamily Alphaherpesvirinae. TeHV-3 strain 4295 is a mixture of three forms (m1, m2, and M), in which, in comparison to strain 1976, the genomes exhibit large, partially overlapping deletions of 12.5 to 22.4 kb. Viral subclones representing these forms were isolated by limiting dilution assays, and each replicated in cell culture comparably to strain 1976. With the goal of testing the potential of the three forms as attenuated vaccine candidates, strain 4295 was inoculated intranasally into Hermann's tortoises (Testudo hermanni). All inoculated subjects died, and PCR analyses demonstrated the ability of the m2 and M forms to spread and invade the brain. In contrast, the m1 form was detected in none of the organs tested, suggesting its potential as the basis of an attenuated vaccine candidate. Our findings represent a major step toward characterizing TeHV-3 and developing prophylactic methods against it. IMPORTANCE Testudinid herpesvirus 3 (TeHV-3) causes a lethal disease in tortoises, several species of which are endangered. We have characterized the viral genome and used this information to take steps toward developing an attenuated vaccine. We have sequenced the genomes of two strains (1976 and 4295), compared their growth in vitro, and investigated the pathogenesis of strain 4295, which consists of three deletion mutants. The major findings are that (i) TeHV-3 has a novel genome structure, (ii) its closest relative is a turtle herpesvirus, (iii) it contains interleukin-10 and semaphorin genes (the first time these have been reported in an alphaherpesvirus), (iv) a sizeable region of the genome is not required for viral replication in vitro or virulence in vivo, and (v) one of the components of strain 4295, which has a deletion of 22.4 kb, exhibits properties indicating that it may serve as the starting point for an attenuated vaccine. PMID:26339050

75 FR 41229 - Endangered and Threatened Wildlife and Plants; Permit, San Bernardino County, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-15

... scrub and sandy loam soils. Desert tortoise surveys were conducted on the property and two individuals... species has been recorded nearby and the property is within the range of and provides suitable habitat for... risks; (3) Approval of the HCP would not result in any cumulative or growth-inducing impacts and would...

The Hare and the Tortoise: A Comparative Review of the Drive towards Inclusive Education Policies in England and Cyprus

ERIC Educational Resources Information Center

Jones, Caroline; Symeonidou, Simoni

2017-01-01

This paper explores the process of policy formulation and implementation in relation to children commonly described as having "special educational needs" and disability (SEND), in Cyprus and in England. Drawing on qualitative research evidence from key primary documentary sources including legislation, statutory and non-statutory…

The Octopus, the Squid and the Tortoise

ERIC Educational Resources Information Center

Caruth, Gail D.; Caruth, Donald L.

2013-01-01

What is the role of the Doctor of Philosophy (PhD) today? This is not a new question. In 1903, William James questioned the value of the degree as an indicator of teaching ability. Unfortunately, the issue James raised has never been resolved. Move forward in time to 1990. Theodore Ziolkowski essentially agreed with James, but raised additional…

Effects of predatory fish on survival and behavior of larval gopher frogs (Rana capito) and Southern Leopard Frogs (Rana sphenocephala)

USGS Publications Warehouse

Gregoire, D.R.; Gunzburger, M.S.

2008-01-01

Southern Leopard Frogs, Rana sphenocephala, are habitat generalists occurring in virtually all freshwater habitats within their geographic range, whereas Gopher Frogs, Rana capito, typically breed in ponds that do not normally contain fish. To evaluate the potential for predation by fish to influence the distribution of these species, we conducted a randomized factorial experiment. We examined the survival rate and behavior of tadpoles when exposed to Warmouth Sunfish, Lepomis gulosus, Banded Sunfish, Enneacanthus obesus, and Eastern Mosquitofish, Gambusia holbrooki. We also conducted a choice experiment to examine the survival rate of the two species of tadpoles when a predator is given a choice of both species simultaneously. Lepomis gulosus consumed the most tadpoles and ate significantly more tadpoles of R. capito than R. sphenocephala. Gambusia holbrooki injured the most tadpoles, especially R. capito. Enneacanthus obesus did not have an effect on behavior or survival of either anuran species. Tadpoles of both anurans increased hiding when in the presence of L. gulosus and G. holbrooki, but a greater proportion of R. capito hid than did R. sphenocephala. Our results suggest that R. capito are more vulnerable to predation by fish than are R. sphenocephala. The introduction of fish may play a role in population declines of certain anurans breeding in normally fish-free wetlands, and even small fish, such as mosquitofish, may have significant negative effects on the tadpoles of R. capito. Copyright 2008 Society for the Study or Amphibians and Reptiles.

Linking goniometer measurements to hyperspectral and multisensor imagery for retrieval of beach properties and coastal characterization

NASA Astrophysics Data System (ADS)

Bachmann, Charles M.; Gray, Deric; Abelev, Andrei; Philpot, William; Montes, Marcos J.; Fusina, Robert; Musser, Joseph; Li, Rong-Rong; Vermillion, Michael; Smith, Geoffrey; Korwan, Daniel; Snow, Charlotte; Miller, W. David; Gardner, Joan; Sletten, Mark; Georgiev, Georgi; Truitt, Barry; Killmon, Marcus; Sellars, Jon; Woolard, Jason; Parrish, Christopher; Schwarzscild, Art

2012-06-01

In June 2011, a multi-sensor airborne remote sensing campaign was flown at the Virginia Coast Reserve Long Term Ecological Research site with coordinated ground and water calibration and validation (cal/val) measurements. Remote sensing imagery acquired during the ten day exercise included hyperspectral imagery (CASI-1500), topographic LiDAR, and thermal infra-red imagery, all simultaneously from the same aircraft. Airborne synthetic aperture radar (SAR) data acquisition for a smaller subset of sites occurred in September 2011 (VCR'11). Focus areas for VCR'11 were properties of beaches and tidal flats and barrier island vegetation and, in the water column, shallow water bathymetry. On land, cal/val emphasized tidal flat and beach grain size distributions, density, moisture content, and other geotechnical properties such as shear and bearing strength (dynamic deflection modulus), which were related to hyperspectral BRDF measurements taken with the new NRL Goniometer for Outdoor Portable Hyperspectral Earth Reflectance (GOPHER). This builds on our earlier work at this site in 2007 related to beach properties and shallow water bathymetry. A priority for VCR'11 was to collect and model relationships between hyperspectral imagery, acquired from the aircraft at a variety of different phase angles, and geotechnical properties of beaches and tidal flats. One aspect of this effort was a demonstration that sand density differences are observable and consistent in reflectance spectra from GOPHER data, in CASI hyperspectral imagery, as well as in hyperspectral goniometer measurements conducted in our laboratory after VCR'11.

Long-term monitoring of a cable stayed bridge using a SCADA system

NASA Astrophysics Data System (ADS)

Torbol, Marco; Kim, Sehwan; Shinozuka, Masanobu

2012-04-01

DuraMote is a MEMS-based remote sensing system, which is developed for the NIST TIP project, Next Generation SCADA for Prevention and Mitigation of Water System Infrastructure Disaster. It is designed for supervisory control and data acquisition (SCADA) of pipe ruptures in water distribution systems. In this project, a method is developed to detect the pipe ruptures by analyzing the acceleration data gathered by DuraMote which consists of two primary components; the first, "Gopher" contains the accelerometers and are attached to the water pipe surface noninvasively, and the second, "Roocas" is placed above ground supplying the power to, and retrieving the data from the multiple Gophers, and then transmit the data through Wi-Fi to a base station. The relays support the Wi-Fi network to facilitate the transmission. A large scale bridge provides an ideal test-bet to validate the performance of such a complex monitoring system as DuraMote for its accuracy, reliability, robustness, and user friendliness. This is because a large bridge is most of the time subjected to susceptible level of ambient vibration due to passing loads, wind, etc. DuraMote can record the acceleration time history arising from the vibration making it possible to estimate the frequency values of various bridge vibration modes. These estimated frequency values are then compared with the values computed from analytical model of the bridge for the verification of the accuracy of DuraMote. It is noted that such a verification method cannot be used practically by deploying DuraMote on a water distribution network since the dynamic behavior of a pipe network, either above or underground, is too complex to model analytically for this purpose, and in addition, the network generally lacks conveniently recordable ambient vibration. In this experiment, the performance of DuraMote system was tested being installed on the Hwamyung Bridge, a 500 m long RC cable stayed bridge in Korea for long term monitoring. In total, the system consisted of 24 accelerometers, 13 Gophers, 10 Roocas, 5 relays, and 1 base station. As it happened, the bridge was subjected to heavy rain, winds, and a typhoon during the experiment allowing the DuraMote to demonstrate extra ordinary robustness and durability. Indeed, in spite of the rough weather, acceleration data was continuously recorded from which natural frequencies, mode shapes, and other structural parameters were calculated. This opportunity would not have happened if the experiment was planned for a shorter duration.

Evidence for biologic response to pedogenesis along the Merced River chronosequence, Central Valley, California

NASA Astrophysics Data System (ADS)

Reed, S. E.; Amundson, R.

2010-12-01

Long-term soil weathering results in accumulations of clay and reduced hydraulic conductivity. How biology responds to these changes in the physical environment and how the response, in turn, influences landscape development are crucial questions in the effort to elucidate the links between the biologic and physical earth surface domains. Mima mounds are small, circular half-domes of soil that are suspected of being formed by burrowing rodents, as an adaption to saturated soil conditions. In the swales between the mounds, ephemeral wetlands called vernal pools, support a suite of endemic and endangered plant and animal species. Mima mounds, then, may provide a useful model by which to examine the complex feedbacks between landscape and life. In this study, changes in mound characteristics and in biological activity (pocket gopher, Thomomys bottae) are investigated across the Merced River chronosequence, a series of alluvial terraces which have been shown to exhibit an increasing degree of soil and hardpan development with landform age. Mound morphology (size, slope, curvature, concentration, elongation, dispersion) and relation to environmental parameters were analyzed using airborne LIDAR (light detection and ranging) imagery of the mounds. The high-resolution (1m) LIDAR surveys (conducted in 2006 and 2010) cover 65km2 and comprise seven different-aged landforms, ranging from several hundred years to several million years. Minimal filtering was performed on the dataset given the absence of large vegetation or other obstructions. A 20x20m moving window filter was used to smooth out the low frequency signals and accentuate mounded features. To test how and whether the subterranean mammals modify their burrowing habits in response to soil age, biotic sediment transport was measured monthly on 0.01, 0.5, and 2 m.y.o. terraces using RFID (radio frequency identification) technology. Half-liter portions of soil containing five RFID tags were implanted in active gopher tunnels on several size classes of mounds and at three positions on each mound (base, mid, and top). Within two weeks of insertion, tags were located using an RFID reader, and displacement was measured using a differential GPS. The surveys show distinct differences in mound and burrow form and biotic activity across the terraces. These results enhance our understanding of the rates at which landscapes are biotically transformed, and, when applied to sediment transport models, provide further evidence that Mima mounds are likely created and maintained by pocket gophers.

Validation and Development of a Certification Program for Using K9s to Survey Desert Tortoises

DTIC Science & Technology

2011-08-01

DoD land in the Eastern Colorado recovery unit on the Chocolate Mountain Air Gunnery Range; sampling data are reported separately for DoD land in this...2006. Diagnostic accuracy of canine scent detection in early- and late-stage lung and breast cancers. Integrative Cancer Therapies . 5(1):30-39. Ngai, J

Afghan Tortoise, Korean Hare: Advising in Hard and Soft Cultures

DTIC Science & Technology

2010-01-01

turned generally positive with the success of Christian missionaries. In contrast, Afghanistan’s experience was as a pawn in the hegemonic struggle...Hofstede analyzed values through four quantifiable dimensions: power distance, collectivism versus individualism, masculinity versus femininity, and...the relationship between people and the group. Masculinity versus femininity measured the values associated with the roles of men and women

Simple method for culture of peripheral blood lymphocytes of Testudinidae.

PubMed

Silva, T L; Silva, M I A; Venancio, L P R; Zago, C E S; Moscheta, V A G; Lima, A V B; Vizotto, L D; Santos, J R; Bonini-Domingos, C R; Azeredo-Oliveira, M T V

2011-12-06

We developed and optimized a simple, efficient and inexpensive method for in vitro culture of peripheral blood lymphocytes from the Brazilian tortoise Chelonoidis carbonaria (Testudinidae), testing various parameters, including culture medium, mitogen concentration, mitotic index, culture volume, incubation time, and mitotic arrest. Peripheral blood samples were obtained from the costal vein of four couples. The conditions that gave a good mitotic index were lymphocytes cultured at 37°C in minimum essential medium (7.5 mL), with phytohemagglutinin as a mitogen (0.375 mL), plus streptomycin/penicillin (0.1 mL), and an incubation period of 72 h. Mitotic arrest was induced by 2-h exposure to colchicine (0.1 mL), 70 h after establishing the culture. After mitotic arrest, the cells were hypotonized with 0.075 M KCl for 2 h and fixed with methanol/acetic acid (3:1). The non-banded mitotic chromosomes were visualized by Giemsa staining. The diploid chromosome number of C. carbonaria was found to be 52 in females and males, and sex chromosomes were not observed. We were able to culture peripheral blood lymphocytes of a Brazilian tortoise in vitro, for the preparation of mitotic chromosomes.

Early evidence (ca. 12,000 B.P.) for feasting at a burial cave in Israel

PubMed Central

Munro, Natalie D.; Grosman, Leore

2010-01-01

Feasting is one of humanity's most universal and unique social behaviors. Although evidence for feasting is common in the early agricultural societies of the Neolithic, evidence in pre-Neolithic contexts is more elusive. We found clear evidence for feasting on wild cattle and tortoises at Hilazon Tachtit cave, a Late Epipaleolithic (12,000 calibrated years B.P.) burial site in Israel. This includes unusually high densities of butchered tortoise and wild cattle remains in two structures, the unique location of the feasting activity in a burial cave, and the manufacture of two structures for burial and related feasting activities. The results indicate that community members coalesced at Hilazon to engage in special rituals to commemorate the burial of the dead and that feasts were central elements in these important events. Feasts likely served important roles in the negotiation and solidification of social relationships, the integration of communities, and the mitigation of scalar stress. These and other social changes in the Natufian period mark significant changes in human social complexity that continued into the Neolithic period. Together, social and economic change signal the very beginning of the agricultural transition. PMID:20805510

Phylogeographic History and Gene Flow Among Giant Galápagos Tortoises on Southern Isabela Island

PubMed Central

Ciofi, Claudio; Wilson, Gregory A.; Beheregaray, Luciano B.; Marquez, Cruz; Gibbs, James P.; Tapia, Washington; Snell, Howard L.; Caccone, Adalgisa; Powell, Jeffrey R.

2006-01-01

Volcanic islands represent excellent models with which to study the effect of vicariance on colonization and dispersal, particularly when the evolution of genetic diversity mirrors the sequence of geological events that led to island formation. Phylogeographic inference, however, can be particularly challenging for recent dispersal events within islands, where the antagonistic effects of land bridge formation and vicariance can affect movements of organisms with limited dispersal ability. We investigated levels of genetic divergence and recovered signatures of dispersal events for 631 Galápagos giant tortoises across the volcanoes of Sierra Negra and Cerro Azul on the island of Isabela. These volcanoes are among the most recent formations in the Galápagos (<0.7 million years), and previous studies based on genetic and morphological data could not recover a consistent pattern of lineage sorting. We integrated nested clade analysis of mitochondrial DNA control region sequences, to infer historical patterns of colonization, and a novel Bayesian multilocus genotyping method for recovering evidence of recent migration across volcanoes using eleven microsatellite loci. These genetic studies illuminate taxonomic distinctions as well as provide guidance to possible repatriation programs aimed at countering the rapid population declines of these spectacular animals. PMID:16387883

Phylogeographic history and gene flow among giant Galápagos tortoises on southern Isabela Island.

PubMed

Ciofi, Claudio; Wilson, Gregory A; Beheregaray, Luciano B; Marquez, Cruz; Gibbs, James P; Tapia, Washington; Snell, Howard L; Caccone, Adalgisa; Powell, Jeffrey R

2006-03-01

Volcanic islands represent excellent models with which to study the effect of vicariance on colonization and dispersal, particularly when the evolution of genetic diversity mirrors the sequence of geological events that led to island formation. Phylogeographic inference, however, can be particularly challenging for recent dispersal events within islands, where the antagonistic effects of land bridge formation and vicariance can affect movements of organisms with limited dispersal ability. We investigated levels of genetic divergence and recovered signatures of dispersal events for 631 Galápagos giant tortoises across the volcanoes of Sierra Negra and Cerro Azul on the island of Isabela. These volcanoes are among the most recent formations in the Galápagos (<0.7 million years), and previous studies based on genetic and morphological data could not recover a consistent pattern of lineage sorting. We integrated nested clade analysis of mitochondrial DNA control region sequences, to infer historical patterns of colonization, and a novel Bayesian multilocus genotyping method for recovering evidence of recent migration across volcanoes using eleven microsatellite loci. These genetic studies illuminate taxonomic distinctions as well as provide guidance to possible repatriation programs aimed at countering the rapid population declines of these spectacular animals.

Predation as the primary selective force in recurrent evolution of gigantism in Poecilozonites land snails in Quaternary Bermuda.

PubMed

Olson, Storrs L; Hearty, Paul J

2010-12-23

During the last half million years, pulses of gigantism in the anagenetic lineage of land snails of the subgenus Poecilozonites on Bermuda were correlated with glacial periods when lower sea level resulted in an island nearly an order of magnitude larger than at present. During those periods, the island was colonized by large vertebrate predators that created selection pressure for large size and rapid growth in the snails. Extreme reduction in land area from rising seas, along with changes in ecological conditions at the onset of interglacial episodes, marked extinction events for large predators, after which snails reverted to much smaller size. The giant snails were identical in morphology during the last two glacials when the predators included a large flightless rail Rallus recessus (marine isotope stages (MIS) 4-2) and a crane Grus latipes and a duck Anas pachysceles (MIS 6). In a preceding glacial period (MIS 10), when the fauna also included the tortoise Hesperotestudo bermudae, the snails were not only large, but the shells were much thicker, presumably to prevent crushing by tortoises. Evolution of Poecilozonites provides an outstanding example of dramatic morphological change in response to environmental pressures in the absence of cladogenesis.

Adding tools to the open source toolbox: The Internet

NASA Technical Reports Server (NTRS)

Porth, Tricia

1994-01-01

The Internet offers researchers additional sources of information not easily available from traditional sources such as print volumes or commercial data bases. Internet tools such as e-mail and file transfer protocol (ftp) speed up the way researchers communicate and transmit data. Mosaic, one of the newest additions to the Internet toolbox, allows users to combine tools such as ftp, gopher, wide area information server, and the world wide web with multimedia capabilities. Mosaic has quickly become a popular means of making information available on the Internet because it is versatile and easily customizable.

Inventory and analysis of natural vegetation and related resources from space and high altitude photography

NASA Technical Reports Server (NTRS)

Poulton, C. E.

1972-01-01

A multiple sampling technique was developed whereby spacecraft photographs supported by aircraft photographs could be used to quantify plant communities. Large scale (1:600 to 1:2,400) color infrared aerial photographs were required to identify shrub and herbaceous species. These photos were used to successfully estimate a herbaceous standing crop biomass. Microdensitometry was used to discriminate among specific plant communities and individual plant species. Large scale infrared photography was also used to estimate mule deer deaths and population density of northern pocket gophers.

Maybe Aesop Was Right, the Tortoise Does Win: A Natural History of the Slow Reading Movement

ERIC Educational Resources Information Center

Niedermeyer, W. Jason

2017-01-01

In the past decade, there has been a growing recognition that society's emphasis on speed and efficiency came with some costs: a loss of the ability to appreciate activities and understand their meanings. Recently, this meta-movement has made its way into the literature on literacy, causing the author to embark on an investigation into the…

Final Nellis Air Force Base Capital Improvements Program Environmental Assessment

DTIC Science & Technology

2013-08-01

USCB United States Census Bureau USFWS United States Fish and Wildlife Service VOC Volatile Organic Compound WINDO Wing Infrastructure and...desert tortoise, consultation with the United States (U.S.) Fish and Wildlife Service would be initiated. Consultation with the U.S. Army Corps of...and decrease energy consumption on military installations. The projects described in the CIP are derived from the Base Comprehensive Asset Management

Nellis Air Force Base Capital Improvements Program Environmental Assessment

DTIC Science & Technology

2013-08-01

Air Force Warfare Center USC United States Code USCB United States Census Bureau USFWS United States Fish and Wildlife Service VOC Volatile...project arise with the potential to affect desert tortoise, consultation with the United States (U.S.) Fish and Wildlife Service would be initiated...Environmental Design (LEED) facilities and decrease energy consumption on military installations. The projects described in the CIP are derived

Hares, Tortoises and the Social Construction of the Pupil: Differentiated Learning in French and English Primary Schools

ERIC Educational Resources Information Center

Raveaud, Maroussia

2005-01-01

This article examines differentiation by task as it is used and perceived in French and English primary schools. It highlights the influence of national context on teaching and learning. The study rests on classroom observations in 12 Key Stage 1 classes located in socially disadvantaged areas. The first section sets the mission of schooling in a…

REPTILES OF THE NEVADA TEST SITE

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tanner, W.W.; Jorgensen, C.D.

1963-10-01

Results are reported from an ecological study of reptiles of the Nevada Test Site. Twenty-nine species of reptiles were found, including one tortoise, thirteen lizards, ard fifteen snakes. The effects of nuclear detonations were apparent on the distribution of reptiles near ground zero. The degree of disturbance decreased outward from ground zero. Food and suitable habitat were the main factors affecting the distribution of reptiles. (C.H.)

A Genomic Approach to Unravel Host-Pathogen Interaction in Chelonians: The Example of Testudinid Herpesvirus 3

PubMed Central

Origgi, Francesco C.; Tecilla, Marco; Pilo, Paola; Aloisio, Fabio; Otten, Patricia; Aguilar-Bultet, Lisandra; Sattler, Ursula; Roccabianca, Paola; Romero, Carlos H.; Bloom, David C.; Jacobson, Elliott R.

2015-01-01

We report the first de novo sequence assembly and analysis of the genome of Testudinid herpesvirus 3 (TeHV3), one of the most pathogenic chelonian herpesviruses. The genome of TeHV3 is at least 150,080 nucleotides long, is arranged in a type D configuration and comprises at least 102 open reading frames extensively co-linear with those of Human herpesvirus 1. Consistently, the phylogenetic analysis positions TeHV3 among the Alphaherpesvirinae, closely associated with Chelonid herpesvirus 5, a Scutavirus. To date, there has been limited genetic characterization of TeHVs and a resolution beyond the genotype was not feasible because of the lack of informative DNA sequences. To exemplify the potential benefits of the novel genomic information provided by this first whole genome analysis, we selected the glycoprotein B (gB) gene, for detailed comparison among different TeHV3 isolates. The rationale for selecting gB is that it encodes for a well-conserved protein among herpesviruses but is coupled with a relevant antigenicity and is consequently prone to accumulate single nucleotide polymorphisms. These features were considered critical for an ideal phylogenetic marker to investigate the potential existence of distinct TeHV3 genogroups and their associated pathology. Fifteen captive tortoises presumptively diagnosed to be infected with TeHVs or carrying compatible lesions on the basis of either the presence of intranuclear inclusions (presumptively infected) and/or diphtheronecrotic stomatitis-glossitis or pneumonia (compatible lesions) were selected for the study. Viral isolation, TeHV identification, phylogenetic analysis and pathological characterization of the associated lesions, were performed. Our results revealed 1) the existence of at least two distinct TeHV3 genogroups apparently associated with different pathologies in tortoises and 2) the first evidence for a putative homologous recombination event having occurred in a chelonian herpesvirus. This novel information is not only fundamental for the genetic characterization of this virus but is also critical to lay the groundwork for an improved understanding of host-pathogen interactions in chelonians and contribute to tortoise conservation. PMID:26244892

Dog-Bone Horns for Piezoelectric Ultrasonic/Sonic Actuators

NASA Technical Reports Server (NTRS)

Sherrit, Stewart; Bar-Cohen, Yoseph; Chang, Zensheu; Bao, Xiaoqi

2007-01-01

A shape reminiscent of a dog bone has been found to be superior to other shapes for mechanical-amplification horns that are components of piezoelectrically driven actuators used in a series of related devices denoted generally as ultrasonic/sonic drill/corers (USDCs). The first of these devices was reported in Ultrasonic/Sonic Drill/Corers With Integrated Sensors (NPO-20856), NASA Tech Briefs, Vol. 25, No. 1 (January 2001), page 38. The dog-bone shape was conceived especially for use in a more recent device in the series, denoted an ultrasonic/ sonic gopher, that was described in Ultrasonic/Sonic Mechanisms for Drilling and Coring (NPO-30291), NASA Tech Briefs, Vol. 27, No. 9 (September 2003), page 65. The figure shows an example of a dog-bone-shaped horn and other components of an ultrasonic gopher. Prerequisite to a meaningful description of this development is an unavoidably lengthy recapitulation of the principle of operation of a USDC and, more specifically, of the ultrasonic/sonic gopher as described previously in NASA Tech Briefs. The ultrasonic actuator includes a stack of piezoelectric rings, the horn, a metal backing, and a bolt that connects the aforementioned parts and provides compressive pre-strain to the piezoelectric stack to prevent breakage of the rings during extension. The stack of piezoelectric rings is excited at the resonance frequency of the overall ultrasonic actuator. Through mechanical amplification by the horn, the displacement in the ultrasonic vibration reaches tens of microns at the tip of the horn. The horn hammers an object that is denoted the free mass because it is free to move longitudinally over a limited distance between hard stops: The free mass bounces back and forth between the ultrasonic horn and a tool bit (a drill bit or a corer). Because the longitudinal speed of the free mass is smaller than the longitudinal speed of vibration of the tip of the horn, contact between the free mass and the horn tip usually occurs at a phase of the vibration favorable to transfer of momentum from the horn to the free mass. Therefore, the free mass picks up momentum and is accelerated back to the tool bit. Upon impact of the free mass on the tool bit, momentum is transferred to the tool bit. The impacts of the free mass on the tool bit repeat at a sonic frequency that can range from tens of hertz to about 1 kHz. The shock waves caused by the impacts of the free mass propagate to the interface between the tool bit and the medium (typically, rock, ice, or other brittle material) to be drilled or cored. The medium becomes fractured when its ultimate strain is exceeded at the medium/tool-bit interface. This concludes the description of the principle of operation.

Predation as the primary selective force in recurrent evolution of gigantism in Poecilozonites land snails in Quaternary Bermuda

PubMed Central

Olson, Storrs L.; Hearty, Paul J.

2010-01-01

During the last half million years, pulses of gigantism in the anagenetic lineage of land snails of the subgenus Poecilozonites on Bermuda were correlated with glacial periods when lower sea level resulted in an island nearly an order of magnitude larger than at present. During those periods, the island was colonized by large vertebrate predators that created selection pressure for large size and rapid growth in the snails. Extreme reduction in land area from rising seas, along with changes in ecological conditions at the onset of interglacial episodes, marked extinction events for large predators, after which snails reverted to much smaller size. The giant snails were identical in morphology during the last two glacials when the predators included a large flightless rail Rallus recessus (marine isotope stages (MIS) 4-2) and a crane Grus latipes and a duck Anas pachysceles (MIS 6). In a preceding glacial period (MIS 10), when the fauna also included the tortoise Hesperotestudo bermudae, the snails were not only large, but the shells were much thicker, presumably to prevent crushing by tortoises. Evolution of Poecilozonites provides an outstanding example of dramatic morphological change in response to environmental pressures in the absence of cladogenesis. PMID:20554560

Kinematics, muscular activity and propulsion in gopher snakes

PubMed

Moon; Gans

1998-10-01

Previous studies have addressed the physical principles and muscular activity patterns underlying terrestrial lateral undulation in snakes, but not the mechanism by which muscular activity produces curvature and propulsion. In this study, we used synchronized electromyography and videography to examine the muscular basis and propulsive mechanism of terrestrial lateral undulation in gopher snakes Pituophis melanoleucus affinis. Specifically, we used patch electrodes to record from the semispinalis, longissimus dorsi and iliocostalis muscles in snakes pushing against one or more pegs. Axial bends propagate posteriorly along the body and contact the pegs at or immediately posterior to an inflection of curvature, which then reverses anterior to the peg. The vertebral column bends broadly around a peg, whereas the body wall bends sharply and asymmetrically around the anterior surface of the peg. The epaxial muscles are always active contralateral to the point of contact with a peg; they are activated slightly before or at the point of maximal convexity and deactivated variably between the inflection point and the point of maximal concavity. This pattern is consistent with muscular shortening and the production of axial bends, although variability in the pattern indicates that other muscles may affect the mechanics of the epaxial muscles. The kinematic and motor patterns in snakes crawling against experimentally increased drag indicated that forces are produced largely by muscles that are active in the axial bend around each peg, rather than by distant muscles from which the forces might be transmitted by connective tissues. At each point of force exertion, the propulsive mechanism of terrestrial lateral undulation may be modeled as a type of cam-follower, in which continuous bending of the trunk around the peg produces translation of the snake.

Habitat associations of vertebrate prey within the controlled area study zone

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marr, N.V.; Brandt, C.A.; Fitzner, R.E.

1988-03-01

Twelve study locations were established in nine habitat types in the vicinity of the proposed reference repository location. Eight species of small mammals were captured. Great Basin pocket mice (Perognathus parvus) comprised the majority of individuals captured, followed by deer mice (Peromyscus maniculatus), Northern pocket gopher (Thomomys talpoides), Western harvest mouse (Reithrodontomys megalotus), Grasshopper mouse (Onychomys leucogaster), Montane vole, (Microtus montanus), House mouse (Mus musculus), and the Bushy-tailed woodrat (Neotoma cinerea). Pocket mice were captured in all habitats sampled; deer mice were obtained in all habitats save hopsage and nearly pure cheatgrass stands. The highese capture rates were found inmore » bitterbrush and riparian habitats. Capture sex ratios for both pocket mice and deer mice were significantly different from equality. Body weights for deer mice and pocket mice exhibited a great deal of heterogeneity across trap sites, although only the heterogeneity for pocket mice was significant. In general, body weights for both species were greater in the sagebrush habitats than elsewhere. These differences are interpreted in light of habitat evaluation methodologies. Six species of reptiles and one species of amphibian were captured. Side-blotched lizards (Uta stansburiana) were by far the most frequently captured species. The predominant snakes captured were the yellow-bellied racer (Coluber constrictor) and the Great Basin gopher snake (Pituophis melanoleucus). Two Great Basin spadefoot toads (Scaphiopus intermontanus) captured at the Rattlesnake Springs trap site. Species diversity was quite low (Shannon-Wiener H )equals) 1.03). Side-blotched lizards were found in all habitats save near the talus on Gable Mountain and on the gravel pad site. The only other lizard species (northern sagebrush lizard (Sceloporus graciosus) and short-horned lizard (Phrynosoma douglasii)) were obtained in bitterbrush habitat. 20 refs., 1 fig., 9 tabs.« less

Biology of North American tortoises

USGS Publications Warehouse

Bury, R. Bruce; Germano, David J.

1994-01-01

Chelonians have fascinated people for centuries and have been the object of biological studies for nearly as long. Perhaps the long life span and harmless demeanor of most species contribute to their wide appeal. they also represent a link to the distant past because their characteristic shell separated this line of ectotherms from all other reptiles and all other animals in the age of dinosaurs (Pough et al. 1989). However, the origins of chelonians remain a mystery.

Relocation of the 146th Tactical Airlift Wing of the California Air National Guard. Volume 2. Appendices

DTIC Science & Technology

1985-08-01

Status *Non-native species Y A L D GNETAE Ephedraceae - Joint Fir Family Ephedra nevadensis C 0 A Nevada Morman Tea DICOTYLEDONES 3 Asteraceae...tortoise Crotalus viridis Western rattlesnake Crotalus cerastes Sidewinder Tantilla planiceps Black-headed snake Bufo boreas Common toad Xantusia viiilis...plant community is Joshua Tree Woodland with Mormon STea ( Ephedra sp.?), Cholla (Opuntia sp.?), Creosote-bush (Larrea Divaricata), Red Brome (Bromus

Molecular Detection of Tick-Borne Pathogen Diversities in Ticks from Livestock and Reptiles along the Shores and Adjacent Islands of Lake Victoria and Lake Baringo, Kenya.

PubMed

Omondi, David; Masiga, Daniel K; Fielding, Burtram C; Kariuki, Edward; Ajamma, Yvonne Ukamaka; Mwamuye, Micky M; Ouso, Daniel O; Villinger, Jandouwe

2017-01-01

Although diverse tick-borne pathogens (TBPs) are endemic to East Africa, with recognized impact on human and livestock health, their diversity and specific interactions with tick and vertebrate host species remain poorly understood in the region. In particular, the role of reptiles in TBP epidemiology remains unknown, despite having been implicated with TBPs of livestock among exported tortoises and lizards. Understanding TBP ecologies, and the potential role of common reptiles, is critical for the development of targeted transmission control strategies for these neglected tropical disease agents. During the wet months (April-May; October-December) of 2012-2013, we surveyed TBP diversity among 4,126 ticks parasitizing livestock and reptiles at homesteads along the shores and islands of Lake Baringo and Lake Victoria in Kenya, regions endemic to diverse neglected tick-borne diseases. After morphological identification of 13 distinct Rhipicephalus, Amblyomma , and Hyalomma tick species, ticks were pooled (≤8 individuals) by species, host, sampling site, and collection date into 585 tick pools. By supplementing previously established molecular assays for TBP detection with high-resolution melting analysis of PCR products before sequencing, we identified high frequencies of potential disease agents of ehrlichiosis (12.48% Ehrlichia ruminantium , 9.06% Ehrlichia canis ), anaplasmosis (6.32% Anaplasma ovis , 14.36% Anaplasma platys , and 3.08% Anaplasma bovis ,), and rickettsiosis (6.15% Rickettsia africae , 2.22% Rickettsia aeschlimannii , 4.27% Rickettsia rhipicephali , and 4.95% Rickettsia spp.), as well as Paracoccus sp. and apicomplexan hemoparasites (0.51% Theileria sp., 2.56% Hepatozoon fitzsimonsi , and 1.37% Babesia caballi ) among tick pools. Notably, we identified E. ruminantium in both Amblyomma and Rhipicephalus pools of ticks sampled from livestock in both study areas as well as in Amblyomma falsomarmoreum (66.7%) and Amblyomma nuttalli (100%) sampled from tortoises and Amblyomma sparsum (63.6%) sampled in both cattle and tortoises at Lake Baringo. Similarly, we identified E. canis in rhipicephaline ticks sampled from livestock and dogs in both regions and Amblyomma latum (75%) sampled from monitor lizards at Lake Victoria. These novel tick-host-pathogen interactions have implications on the risk of disease transmission to humans and domestic animals and highlight the complexity of TBP ecologies, which may include reptiles as reservoir species, in sub-Saharan Africa.

Molecular Detection of Tick-Borne Pathogen Diversities in Ticks from Livestock and Reptiles along the Shores and Adjacent Islands of Lake Victoria and Lake Baringo, Kenya

PubMed Central

Omondi, David; Masiga, Daniel K.; Fielding, Burtram C.; Kariuki, Edward; Ajamma, Yvonne Ukamaka; Mwamuye, Micky M.; Ouso, Daniel O.; Villinger, Jandouwe

2017-01-01

Although diverse tick-borne pathogens (TBPs) are endemic to East Africa, with recognized impact on human and livestock health, their diversity and specific interactions with tick and vertebrate host species remain poorly understood in the region. In particular, the role of reptiles in TBP epidemiology remains unknown, despite having been implicated with TBPs of livestock among exported tortoises and lizards. Understanding TBP ecologies, and the potential role of common reptiles, is critical for the development of targeted transmission control strategies for these neglected tropical disease agents. During the wet months (April–May; October–December) of 2012–2013, we surveyed TBP diversity among 4,126 ticks parasitizing livestock and reptiles at homesteads along the shores and islands of Lake Baringo and Lake Victoria in Kenya, regions endemic to diverse neglected tick-borne diseases. After morphological identification of 13 distinct Rhipicephalus, Amblyomma, and Hyalomma tick species, ticks were pooled (≤8 individuals) by species, host, sampling site, and collection date into 585 tick pools. By supplementing previously established molecular assays for TBP detection with high-resolution melting analysis of PCR products before sequencing, we identified high frequencies of potential disease agents of ehrlichiosis (12.48% Ehrlichia ruminantium, 9.06% Ehrlichia canis), anaplasmosis (6.32% Anaplasma ovis, 14.36% Anaplasma platys, and 3.08% Anaplasma bovis,), and rickettsiosis (6.15% Rickettsia africae, 2.22% Rickettsia aeschlimannii, 4.27% Rickettsia rhipicephali, and 4.95% Rickettsia spp.), as well as Paracoccus sp. and apicomplexan hemoparasites (0.51% Theileria sp., 2.56% Hepatozoon fitzsimonsi, and 1.37% Babesia caballi) among tick pools. Notably, we identified E. ruminantium in both Amblyomma and Rhipicephalus pools of ticks sampled from livestock in both study areas as well as in Amblyomma falsomarmoreum (66.7%) and Amblyomma nuttalli (100%) sampled from tortoises and Amblyomma sparsum (63.6%) sampled in both cattle and tortoises at Lake Baringo. Similarly, we identified E. canis in rhipicephaline ticks sampled from livestock and dogs in both regions and Amblyomma latum (75%) sampled from monitor lizards at Lake Victoria. These novel tick–host–pathogen interactions have implications on the risk of disease transmission to humans and domestic animals and highlight the complexity of TBP ecologies, which may include reptiles as reservoir species, in sub-Saharan Africa. PMID:28620610

Everything you might want to know about the Internet but are afraid to ask!. A new users resource

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thiel, E.

This document is a guide to accessing the Internet and the services available on Internet. The document contains a short explanation of the Internet by E. Kroll and E. Hoffman, brief descriptions of the primary access tools, a glossary, answers to frequently asked questions about the Internet, J. Martin`s `Search for Internet Treasure` and other helpful information. The data access tools discussed in this document include Gopher, World Wide Web, WAIS, ASTRA, ARCHIE, WHOIS, NETSERV, and TRICKLE. The file transfer tool discussed is BITFTP. The two communication services discussed are NETNEWS and LISTSERV.

Assessing the performance of different DTI motion correction strategies in the presence of EPI distortion correction.

PubMed

Taylor, Paul A; Alhamud, A; van der Kouwe, Andre; Saleh, Muhammad G; Laughton, Barbara; Meintjes, Ernesta

2016-12-01

Diffusion tensor imaging (DTI) is susceptible to several artifacts due to eddy currents, echo planar imaging (EPI) distortion and subject motion. While several techniques correct for individual distortion effects, no optimal combination of DTI acquisition and processing has been determined. Here, the effects of several motion correction techniques are investigated while also correcting for EPI distortion: prospective correction, using navigation; retrospective correction, using two different popular packages (FSL and TORTOISE); and the combination of both methods. Data from a pediatric group that exhibited incidental motion in varying degrees are analyzed. Comparisons are carried while implementing eddy current and EPI distortion correction. DTI parameter distributions, white matter (WM) maps and probabilistic tractography are examined. The importance of prospective correction during data acquisition is demonstrated. In contrast to some previous studies, results also show that the inclusion of retrospective processing also improved ellipsoid fits and both the sensitivity and specificity of group tractographic results, even for navigated data. Matches with anatomical WM maps are highest throughout the brain for data that have been both navigated and processed using TORTOISE. The inclusion of both prospective and retrospective motion correction with EPI distortion correction is important for DTI analysis, particularly when studying subject populations that are prone to motion. Hum Brain Mapp 37:4405-4424, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Validation and Development of a Certification Program for Using K9s to Survey Desert Tortoises

DTIC Science & Technology

2013-08-01

more of the demonstrations with their dogs: Aimee Hurt with ‘Finney’ and ‘Wicket’, Margaret “Tudy” Morris and ‘Storm’, John Rarity and ‘Kai’, Chris...odor to get the reward. Day 1 – 3 (Sunday, Monday, Tuesday ) With the dog on a 6’ leash and in front of the handler, the handler will give the...Standard Time). 110 TRAINING LOG INFORMATION WEEK ONE - LINEUPS Days 1-3 Sunday, Monday, Tuesday Training Objectives: • Odor

Turtles All The Way Down: Research Challenges in User-Based Attestation

DTIC Science & Technology

2007-08-01

Turtles All The Way Down: Research Challenges in User-Based Attestation∗ Jonathan M. McCune Adrian Perrig Arvind Seshadri Leendert van Doorn CMU...replying, “What is the tortoise standing on?” “You’re very clever, young man, very clever,” said the old lady, “but it’s turtles all the way down...computing device any more than another. Treating these devices as turtles , the user who seeks a trustworthy system from which to verify oth- ers

Proceedings Interagency Endangered Species Symposium Held in Washington, DC on April 26-28, 1994

DTIC Science & Technology

1994-08-01

Hawaiian forest birds, the Puerto Rican parrot, eastern timber wolf , desert tortoise, and West Indian manatee. In concert with client agencies, NBS is...fishes than any other state. Reclamation’s complex Central Arizona Project, which can provide most of the state’s 2.8 million acre/feet share of Colorado ...conflicts with the needs of bald eagles. Lower Colorado Region One major issue facing the Lower Colorado Region is the long-term operation and Management of

The ecology of overwintering among turtles: where turtles overwinter and its consequences.

PubMed

Ultsch, Gordon R

2006-08-01

Turtles are a small taxon that has nevertheless attracted much attention from biologists for centuries. However, a major portion of their life cycle has received relatively little attention until recently - namely what turtles are doing, and how they are doing it, during the winter. In the northern parts of their ranges in North America, turtles may spend more than half of their lives in an overwintering state. In this review, I emphasise the ecological aspects of overwintering among turtles, and consider how overwintering stresses affect the physiology, behaviour, distributions, and life histories of various species. Sea turtles are the only group of turtles that migrate extensively, and can therefore avoid northern winters. Nevertheless, each year a number of turtles, largely juveniles, are killed when trapped by cold fronts before they move to safer waters. Evidently this risk is an acceptable trade-off for the benefits to a population of inhabiting northern developmental habitats during the summer. Terrestrial turtles pass the winter underground, either in burrows that they excavate or that are preformed. These refugia must provide protection against desiccation and lethal freezing levels. Some burrows are extensive (tortoise genus Gopherus), while others are shallow, or the turtles may simply dig into the ground to a safe depth (turtle genus Terrapene). In the latter genus, freeze tolerance may play an adaptive role. Most non-marine aquatic turtles overwinter underwater, although Clemmys (Actinemys) marmorata routinely overwinters on land when it occurs in riverine habitats, Kinosternon subrubrum often overwinters on land, and several others may overwinter terrestrially on occasion, especially in more southern climates. For northern species that overwinter underwater, there are two physiological groupings, those that are anoxia-tolerant and those that are relatively anoxia-intolerant. All species fare well physiologically in water with a high partial pressure of oxygen (PO2). A lack of anoxia tolerance limits the types of habitats that a freshwater turtle may live in, since unlike sea turtles, they cannot travel long distances to hibernate. Hatchlings of some species of turtles spend their first winter in or below the nest cavity, while hatchlings of other species in the same area, including northern areas, emerge in the autumn and presumably hibernate underwater. All hatchlings are relatively anoxia-intolerant, and there are no studies to date of where hatchling turtles that do not overwinter in or below the nest cavity spend their first winter. Equally little is known of the ontogeny of anoxia tolerance, other than that adults of all species are more anoxia-tolerant than their hatchlings, probably because of their better ossified shells, which provide adults with more buffer reserves and a larger site in which to sequester lactate. The northern limits of turtles are most likely determined by reproductive limitations (time for egg-laying, incubation, and hatching) than by the rigors of hibernation. Mortality is typically lower in turtle populations during hibernation than it is during their active periods. However, episodic mortality events do occur during hibernation, due to freezing, prolonged anoxia, or predation.

Short interspersed elements (SINEs) of the Geomyoidea superfamily rodents.

PubMed

Gogolevsky, Konstantin P; Kramerov, Dmitri A

2006-05-24

A new short interspersed element (SINE) was isolated from the genome of desert kangaroo rat (Dipodomys deserti) using single-primer PCR. This SINE consists of two monomers: the left monomer (IDL) resembles rodent ID element and other tRNAAla(CGC)-derived SINEs, whereas the right one (Geo) shows no similarity with known SINE sequences. PCR and hybridization analyses demonstrated that IDL-Geo SINE is restricted to the rodent superfamily Geomyoidea (families Geomyidea and Heteromyidea). Isolation and analysis of IDL-Geo from California pocket mouse (Chaetodipus californicus) and Botta's pocket gopher (Thomomys bottae) revealed some species-specific features of this SINE family. The structure and evolution of known dimeric SINEs are discussed.

The Internet for Librarians

NASA Astrophysics Data System (ADS)

Grothkopf, U.

Librarianship is currently undergoing major changes. New information sources, accessible via the "network of networks", the Internet, offer opportunities which were previously unknown, but which require continuous ongoing learning. The Internet seems to be organized badly or not at all. The poor appearance might lead to an underestimation of its value. In the following, an introduction to the main functions will be given in order to facilitate understanding and use of the Internet. E-Mail, FTP (File Transfer Protocol) and Telnet will be covered, as well as Mailing lists, Newsgroups and the tools Archie, Gopher, Veronica, WAIS (Wide Area Information Server) and the World Wide Web (WWW). Examples will be given to show possible applications for library services.

Population genomics of the endangered giant Galápagos tortoise

PubMed Central

2013-01-01

Background The giant Galápagos tortoise, Chelonoidis nigra, is a large-sized terrestrial chelonian of high patrimonial interest. The species recently colonized a small continental archipelago, the Galápagos Islands, where it has been facing novel environmental conditions and limited resource availability. To explore the genomic consequences of this ecological shift, we analyze the transcriptomic variability of five individuals of C. nigra, and compare it to similar data obtained from several continental species of turtles. Results Having clarified the timing of divergence in the Chelonoidis genus, we report in C. nigra a very low level of genetic polymorphism, signatures of a weakened efficacy of purifying selection, and an elevated mutation load in coding and regulatory sequences. These results are consistent with the hypothesis of an extremely low long-term effective population size in this insular species. Functional evolutionary analyses reveal a reduced diversity of immunity genes in C. nigra, in line with the hypothesis of attenuated pathogen diversity in islands, and an increased selective pressure on genes involved in response to stress, potentially related to the climatic instability of its environment and its elongated lifespan. Finally, we detect no population structure or homozygosity excess in our five-individual sample. Conclusions These results enlighten the molecular evolution of an endangered taxon in a stressful environment and point to island endemic species as a promising model for the study of the deleterious effects on genome evolution of a reduced long-term population size. PMID:24342523

Population genomics of the endangered giant Galápagos tortoise.

PubMed

Loire, Etienne; Chiari, Ylenia; Bernard, Aurélien; Cahais, Vincent; Romiguier, Jonathan; Nabholz, Benoît; Lourenço, Joao Miguel; Galtier, Nicolas

2013-12-16

The giant Galápagos tortoise, Chelonoidis nigra, is a large-sized terrestrial chelonian of high patrimonial interest. The species recently colonized a small continental archipelago, the Galápagos Islands, where it has been facing novel environmental conditions and limited resource availability. To explore the genomic consequences of this ecological shift, we analyze the transcriptomic variability of five individuals of C. nigra, and compare it to similar data obtained from several continental species of turtles. Having clarified the timing of divergence in the Chelonoidis genus, we report in C. nigra a very low level of genetic polymorphism, signatures of a weakened efficacy of purifying selection, and an elevated mutation load in coding and regulatory sequences. These results are consistent with the hypothesis of an extremely low long-term effective population size in this insular species. Functional evolutionary analyses reveal a reduced diversity of immunity genes in C. nigra, in line with the hypothesis of attenuated pathogen diversity in islands, and an increased selective pressure on genes involved in response to stress, potentially related to the climatic instability of its environment and its elongated lifespan. Finally, we detect no population structure or homozygosity excess in our five-individual sample. These results enlighten the molecular evolution of an endangered taxon in a stressful environment and point to island endemic species as a promising model for the study of the deleterious effects on genome evolution of a reduced long-term population size.

Installation Summaries from the 1996 Survey of Threatened and Endangered Species on Army Lands.

DTIC Science & Technology

1997-12-01

Navajo and Fort Huachuca), northern spotted owl ( Fort Lewis), palila (Pohakuloa), desert tortoise ( Fort Irwin), and the Oregon silverspot butterfly...Tech. Rep. RM-241. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Forest and Range Experiment Station, 1994. 42pp...CO CO 0 4 CL CL 2z cuO~ CC CU Q - - CU CU .2 Q- -- -- -. u a U j r- 0)i C. (u ) t I) k CaOcoE~~ 0a C .- raC )) CU) C) C)~ 2--- cu (nV Oc _ a ) C.) Z

Netlib services and resources

DOE Office of Scientific and Technical Information (OSTI.GOV)

Browne, S.V.; Green, S.C.; Moore, K.

1994-04-01

The Netlib repository, maintained by the University of Tennessee and Oak Ridge National Laboratory, contains freely available software, documents, and databases of interest to the numerical, scientific computing, and other communities. This report includes both the Netlib User`s Guide and the Netlib System Manager`s Guide, and contains information about Netlib`s databases, interfaces, and system implementation. The Netlib repository`s databases include the Performance Database, the Conferences Database, and the NA-NET mail forwarding and Whitepages Databases. A variety of user interfaces enable users to access the Netlib repository in the manner most convenient and compatible with their networking capabilities. These interfaces includemore » the Netlib email interface, the Xnetlib X Windows client, the netlibget command-line TCP/IP client, anonymous FTP, anonymous RCP, and gopher.« less