Test of Graphing and Graph Interpretation Skills.
ERIC Educational Resources Information Center
Hermann, J.
This monograph is a test of graphing and graph interpretation skills which assesses performance on all the skills of graphing which are contained in the AAAS program, Science - A Process Approach. The testing includes construction of bar graphs, interpreting information on graphs, the use of the Cartesian coordinate system, making predictions from…
ERIC Educational Resources Information Center
Appel, Ida J.
The purpose of the study was to determine in what sequence skills in graph interpretation should be presented in grades K-9. A sequential list of mathematics skills for grades K-9 was constructed, graph skills were identified and arranged in a sequential and spiral manner, then graph skills were matched with appropriate mathematics skills and…
ERIC Educational Resources Information Center
Peterman, Karen; Cranston, Kayla A.; Pryor, Marie; Kermish-Allen, Ruth
2015-01-01
This case study was conducted within the context of a place-based education project that was implemented with primary school students in the USA. The authors and participating teachers created a performance assessment of standards-aligned tasks to examine 6-10-year-old students' graph interpretation skills as part of an exploratory research…
NASA Astrophysics Data System (ADS)
Peterman, Karen; Cranston, Kayla A.; Pryor, Marie; Kermish-Allen, Ruth
2015-11-01
This case study was conducted within the context of a place-based education project that was implemented with primary school students in the USA. The authors and participating teachers created a performance assessment of standards-aligned tasks to examine 6-10-year-old students' graph interpretation skills as part of an exploratory research project. Fifty-five students participated in a performance assessment interview at the beginning and end of a place-based investigation. Two forms of the assessment were created and counterbalanced within class at pre and post. In situ scoring was conducted such that responses were scored as correct versus incorrect during the assessment's administration. Criterion validity analysis demonstrated an age-level progression in student scores. Tests of discriminant validity showed that the instrument detected variability in interpretation skills across each of three graph types (line, bar, dot plot). Convergent validity was established by correlating in situ scores with those from the Graph Interpretation Scoring Rubric. Students' proficiency with interpreting different types of graphs matched expectations based on age and the standards-based progression of graphs across primary school grades. The assessment tasks were also effective at detecting pre-post gains in students' interpretation of line graphs and dot plots after the place-based project. The results of the case study are discussed in relation to the common challenges associated with performance assessment. Implications are presented in relation to the need for authentic and performance-based instructional and assessment tasks to respond to the Common Core State Standards and the Next Generation Science Standards.
The Relationships between Logical Thinking, Gender, and Kinematics Graph Interpretation Skills
ERIC Educational Resources Information Center
Bektasli, Behzat; White, Arthur L.
2012-01-01
Problem Statement: Kinematics is one of the topics in physics where graphs are used broadly. Kinematics includes many abstract formulas, and students usually try to solve problems with those formulas. However, using a kinematics graph instead of formulas might be a better option for problem solving in kinematics. Graphs are abstract…
Challenges with Graph Interpretation: A Review of the Literature
ERIC Educational Resources Information Center
Glazer, Nirit
2011-01-01
With the growing emphasis on the development of scientific inquiry skills, the display and interpretation of data are becoming increasingly important. Graph interpretation competence is, in fact, essential to understanding today's world and to be scientifically literate. However, graph interpretation is a complex and challenging activity. Graph…
Integrating concepts and skills: Slope and kinematics graphs
NASA Astrophysics Data System (ADS)
Tonelli, Edward P., Jr.
The concept of force is a foundational idea in physics. To predict the results of applying forces to objects, a student must be able to interpret data representing changes in distance, time, speed, and acceleration. Comprehension of kinematics concepts requires students to interpret motion graphs, where rates of change are represented as slopes of line segments. Studies have shown that majorities of students who show proficiency with mathematical concepts fail accurately to interpret motion graphs. The primary aim of this study was to examine how students apply their knowledge of slope when interpreting kinematics graphs. To answer the research questions a mixed methods research design, which included a survey and interviews, was adopted. Ninety eight (N=98) high school students completed surveys which were quantitatively analyzed along with qualitative information collected from interviews of students (N=15) and teachers ( N=2). The study showed that students who recalled methods for calculating slopes and speeds calculated slopes accurately, but calculated speeds inaccurately. When comparing the slopes and speeds, most students resorted to calculating instead of visual inspection. Most students recalled and applied memorized rules. Students who calculated slopes and speeds inaccurately failed to recall methods of calculating slopes and speeds, but when comparing speeds, these students connected the concepts of distance and time to the line segments and the rates of change they represented. This study's findings will likely help mathematics and science educators to better assist their students to apply their knowledge of the definition of slope and skills in kinematics concepts.
ERIC Educational Resources Information Center
Deniz, Hasan; Dulger, Mehmet F.
2012-01-01
This study examined to what extent inquiry-based instruction supported with real-time graphing technology improves fourth grader's ability to interpret graphs as representations of physical science concepts such as motion and temperature. This study also examined whether there is any difference between inquiry-based instruction supported with…
ERIC Educational Resources Information Center
Gültepe, Nejla
2016-01-01
Graphing subjects in chemistry has been used to provide alternatives to verbal and algorithmic descriptions of a subject by handing students another way of improving their manipulation of concepts. Teachers should therefore know the level of students' graphing skills. Studies have identified that students have difficulty making connections with…
Neural complexity: A graph theoretic interpretation
NASA Astrophysics Data System (ADS)
Barnett, L.; Buckley, C. L.; Bullock, S.
2011-04-01
One of the central challenges facing modern neuroscience is to explain the ability of the nervous system to coherently integrate information across distinct functional modules in the absence of a central executive. To this end, Tononi [Proc. Natl. Acad. Sci. USA.PNASA60027-842410.1073/pnas.91.11.5033 91, 5033 (1994)] proposed a measure of neural complexity that purports to capture this property based on mutual information between complementary subsets of a system. Neural complexity, so defined, is one of a family of information theoretic metrics developed to measure the balance between the segregation and integration of a system’s dynamics. One key question arising for such measures involves understanding how they are influenced by network topology. Sporns [Cereb. Cortex53OPAV1047-321110.1093/cercor/10.2.127 10, 127 (2000)] employed numerical models in order to determine the dependence of neural complexity on the topological features of a network. However, a complete picture has yet to be established. While De Lucia [Phys. Rev. EPLEEE81539-375510.1103/PhysRevE.71.016114 71, 016114 (2005)] made the first attempts at an analytical account of this relationship, their work utilized a formulation of neural complexity that, we argue, did not reflect the intuitions of the original work. In this paper we start by describing weighted connection matrices formed by applying a random continuous weight distribution to binary adjacency matrices. This allows us to derive an approximation for neural complexity in terms of the moments of the weight distribution and elementary graph motifs. In particular, we explicitly establish a dependency of neural complexity on cyclic graph motifs.
Peebles, David; Ali, Nadia
2015-01-01
The distinction between informational and computational equivalence of representations, first articulated by Larkin and Simon (1987) has been a fundamental principle in the analysis of diagrammatic reasoning which has been supported empirically on numerous occasions. We present an experiment that investigates this principle in relation to the performance of expert graph users of 2 × 2 "interaction" bar and line graphs. The study sought to determine whether expert interpretation is affected by graph format in the same way that novice interpretations are. The findings revealed that, unlike novices-and contrary to the assumptions of several graph comprehension models-experts' performance was the same for both graph formats, with their interpretation of bar graphs being no worse than that for line graphs. We discuss the implications of the study for guidelines for presenting such data and for models of expert graph comprehension.
Visual routines are associated with specific graph interpretations.
Michal, Audrey L; Franconeri, Steven L
2017-01-01
We argue that people compare values in graphs with a visual routine - attending to data values in an ordered pattern over time. Do these visual routines exist to manage capacity limitations in how many values can be encoded at once, or do they actually affect the relations that are extracted? We measured eye movements while people judged configurations of a two-bar graph based on size only ("[short tall] or [tall short]?") and contrast only ("[light dark] or [dark light]?"). Participants exhibited visual routines in which they systematically attended to a specific feature (or "anchor point") in the graph; in the size task, most participants inspected the taller bar first, and in the contrast task, most participants attended to the darker bar first. Participants then judged configurations that varied in both size and contrast (e.g., [short-light tall-dark]); however, only one dimension was task-relevant (varied between subjects). During this orthogonal task, participants overwhelmingly relied on the same anchor point used in the single-dimension version, but only for the task-relevant dimension (e.g., taller bar for the size-relevant task). These results suggest that visual routines are associated with specific graph interpretations. Responses were also faster when task-relevant and task-irrelevant anchor points appeared on the same object (congruent) than on different objects (incongruent). This interference from the task-irrelevant dimension suggests that top-down control may be necessary to extract relevant relations from graphs. The effect of visual routines on graph comprehension has implications for both science, technology, engineering, and mathematics pedagogy and graph design.
Pre-Service Science Teachers' Interpretations of Graphs: A Cross-Sectional Study
ERIC Educational Resources Information Center
Çil, Emine; Kar, Hazel
2015-01-01
This study focuses on pre-service science teachers' interpretations of graphs. First, the paper presents data about the freshman and senior pre-service teachers' interpretations of graphs. Then it discusses the effects of pre-service science teacher training program on student teachers' interpretations of graphs. The participants in the study were…
Infusing Counseling Skills in Test Interpretation.
ERIC Educational Resources Information Center
Rawlins, Melanie E.; And Others
1991-01-01
Presents an instructional model based on Neurolinguistic Programming that links counseling student course work in measurement and test interpretation with counseling techniques and theory. A process incorporating Neurolinguistic Programming patterns is outlined for teaching graduate students the counseling skills helpful in test interpretation.…
ERIC Educational Resources Information Center
Boote, Stacy K.
2014-01-01
This study examined how 12- and 13-year-old students' mathematics and science background knowledge affected line graph interpretations and how interpretations were affected by graph question levels. A purposive sample of 14 students engaged in think aloud interviews while completing an excerpted Test of Graphing in Science. Data were…
Sex Differences Related to Graphing Skills in Microcomputer-Based Labs.
ERIC Educational Resources Information Center
Brasell, Heather
As part of an investigation of the effectiveness of a microcomputer-based laboratory (MBL) activity in developing students' graphing skills, this study was specifically designed to examine the differences between females and males in both performance on graphing tasks and on their attitudes to graphs and graph-based activities. Results based on a…
Mathematics. Analyzing and Interpreting Graphs in the Middle Grades: Bottles and Beyond.
ERIC Educational Resources Information Center
Niess, Margaret L.
1995-01-01
Describes activities designed to encourage students to analyze and interpret graphs. Activities include using software to draw clear bottles, fill them gradually, measure and record the water height, then graph the volume and height relationship; graphing cause and effect relationships between gender, height, and shoe size; and graphing…
Undergraduate Student Construction and Interpretation of Graphs in Physics Lab Activities
ERIC Educational Resources Information Center
Nixon, Ryan S.; Godfrey, T. J.; Mayhew, Nicholas T.; Wiegert, Craig C.
2016-01-01
Lab activities are an important element of an undergraduate physics course. In these lab activities, students construct and interpret graphs in order to connect the procedures of the lab with an understanding of the related physics concepts. This study investigated undergraduate students' construction and interpretation of graphs with best-fit…
Students' Interpretation of a Function Associated with a Real-Life Problem from Its Graph
ERIC Educational Resources Information Center
Mahir, Nevin
2010-01-01
The properties of a function such as limit, continuity, derivative, growth, or concavity can be determined more easily from its graph than by doing any algebraic operation. For this reason, it is important for students of mathematics to interpret some of the properties of a function from its graph. In this study, we investigated the competence of…
Exploring Text and Icon Graph Interpretation in Students with Dyslexia: An Eye-tracking Study.
Kim, Sunjung; Wiseheart, Rebecca
2017-02-01
A growing body of research suggests that individuals with dyslexia struggle to use graphs efficiently. Given the persistence of orthographic processing deficits in dyslexia, this study tested whether graph interpretation deficits in dyslexia are directly related to difficulties processing the orthographic components of graphs (i.e. axes and legend labels). Participants were 80 college students with and without dyslexia. Response times and eye movements were recorded as students answered comprehension questions about simple data displayed in bar graphs. Axes and legends were labelled either with words (mixed-modality graphs) or icons (orthography-free graphs). Students also answered informationally equivalent questions presented in sentences (orthography-only condition). Response times were slower in the dyslexic group only for processing sentences. However, eye tracking data revealed group differences for processing mixed-modality graphs, whereas no group differences were found for the orthography-free graphs. When processing bar graphs, students with dyslexia differ from their able reading peers only when graphs contain orthographic features. Implications for processing informational text are discussed. Copyright © 2017 John Wiley & Sons, Ltd.
Generalizing a categorization of students' interpretations of linear kinematics graphs
NASA Astrophysics Data System (ADS)
Bollen, Laurens; De Cock, Mieke; Zuza, Kristina; Guisasola, Jenaro; van Kampen, Paul
2016-06-01
We have investigated whether and how a categorization of responses to questions on linear distance-time graphs, based on a study of Irish students enrolled in an algebra-based course, could be adopted and adapted to responses from students enrolled in calculus-based physics courses at universities in Flanders, Belgium (KU Leuven) and the Basque Country, Spain (University of the Basque Country). We discuss how we adapted the categorization to accommodate a much more diverse student cohort and explain how the prior knowledge of students may account for many differences in the prevalence of approaches and success rates. Although calculus-based physics students make fewer mistakes than algebra-based physics students, they encounter similar difficulties that are often related to incorrectly dividing two coordinates. We verified that a qualitative understanding of kinematics is an important but not sufficient condition for students to determine a correct value for the speed. When comparing responses to questions on linear distance-time graphs with responses to isomorphic questions on linear water level versus time graphs, we observed that the context of a question influences the approach students use. Neither qualitative understanding nor an ability to find the slope of a context-free graph proved to be a reliable predictor for the approach students use when they determine the instantaneous speed.
Generalizing a Categorization of Students' Interpretations of Linear Kinematics Graphs
ERIC Educational Resources Information Center
Bollen, Laurens; De Cock, Mieke; Zuza, Kristina; Guisasola, Jenaro; van Kampen, Paul
2016-01-01
We have investigated whether and how a categorization of responses to questions on linear distance-time graphs, based on a study of Irish students enrolled in an algebra-based course, could be adopted and adapted to responses from students enrolled in calculus-based physics courses at universities in Flanders, Belgium (KU Leuven) and the Basque…
Bars, Lines, & Pies: A Graphing Skills Program. Expect the Unexpected with Math[R
ERIC Educational Resources Information Center
Actuarial Foundation, 2013
2013-01-01
"Bars, Lines, & Pies" is a dynamic math program designed to build graphing skills in students, while also showing them the relevance of math in their lives. Developed by The Actuarial Foundation along with Scholastic, the graphing lessons and activities involve engaging, real-world examples about the environment and recycling. In these lessons,…
Effects of Graphing Conventions and Response Options on Interpretation of Small n Graphs
ERIC Educational Resources Information Center
Carter, Mark
2009-01-01
The present study examined the effects of manipulation of two graphing conventions on judgements of time-series data by novice raters. These conventions involved the presence of phase change lines between baseline and intervention data and whether data points across phase changes were connected. The 1990 study of Matyas and Greenwood was also…
ERIC Educational Resources Information Center
Çelik, Harun; Pektas, Hüseyin Miraç
2017-01-01
A one-group quasi-experimental design and survey methodology were used to investigate the effect of virtual laboratory practices on preservice teachers' (N = 29) graphic comprehension and interpretation skills with different learning approaches. Pretest and posttest data were collected with the Test of Understanding Kinematic Graphs. The Learning…
So Many Graphs, So Little Time
ERIC Educational Resources Information Center
Wall, Jennifer J.; Benson, Christine C.
2009-01-01
Interpreting graphs found in various content areas is an important skill for students, especially in light of high-stakes testing. In addition, reading and understanding graphs is an important part of numeracy, or numeric literacy, a skill necessary for informed citizenry. This article explores the different categories of graphs, provides…
Fragmentation network of doubly charged methionine: Interpretation using graph theory.
Ha, D T; Yamazaki, K; Wang, Y; Alcamí, M; Maeda, S; Kono, H; Martín, F; Kukk, E
2016-09-07
The fragmentation of doubly charged gas-phase methionine (HO2CCH(NH2)CH2CH2SCH3) is systematically studied using the self-consistent charge density functional tight-binding molecular dynamics (MD) simulation method. We applied graph theory to analyze the large number of the calculated MD trajectories, which appears to be a highly effective and convenient means of extracting versatile information from the large data. The present theoretical results strongly concur with the earlier studied experimental ones. Essentially, the dication dissociates into acidic group CO2H and basic group C4NSH10. The former may carry a single or no charge and stays intact in most cases, whereas the latter may hold either a single or a double charge and tends to dissociate into smaller fragments. The decay of the basic group is observed to follow the Arrhenius law. The dissociation pathways to CO2H and C4NSH10 and subsequent fragmentations are also supported by ab initio calculations.
Graph-based interpretation of the molecular interstellar medium segmentation
NASA Astrophysics Data System (ADS)
Colombo, D.; Rosolowsky, E.; Ginsburg, A.; Duarte-Cabral, A.; Hughes, A.
2015-12-01
We present a generalization of the giant molecular cloud identification problem based on cluster analysis. The method we designed, SCIMES (Spectral Clustering for Interstellar Molecular Emission Segmentation) considers the dendrogram of emission in the broader framework of graph theory and utilizes spectral clustering to find discrete regions with similar emission properties. For Galactic molecular cloud structures, we show that the characteristic volume and/or integrated CO luminosity are useful criteria to define the clustering, yielding emission structures that closely reproduce `by-eye' identification results. SCIMES performs best on well-resolved, high-resolution data, making it complementary to other available algorithms. Using 12CO(1-0) data for the Orion-Monoceros complex, we demonstrate that SCIMES provides robust results against changes of the dendrogram-construction parameters, noise realizations and degraded resolution. By comparing SCIMES with other cloud decomposition approaches, we show that our method is able to identify all canonical clouds of the Orion-Monoceros region, avoiding the overdivision within high-resolution survey data that represents a common limitation of several decomposition algorithms. The Orion-Monoceros objects exhibit hierarchies and size-line width relationships typical to the turbulent gas in molecular clouds, although `the Scissors' region deviates from this common description. SCIMES represents a significant step forward in moving away from pixel-based cloud segmentation towards a more physical-oriented approach, where virtually all properties of the ISM can be used for the segmentation of discrete objects.
ERIC Educational Resources Information Center
McMillen, Sue; McMillen, Beth
2010-01-01
Connecting stories to qualitative coordinate graphs has been suggested as an effective instructional strategy. Even students who are able to "create" bar graphs may struggle to correctly "interpret" them. Giving children opportunities to work with qualitative graphs can help them develop the skills to interpret, describe, and compare information…
Evaluating Interpreter's Skill by Measurement of Prosody Recognition
NASA Astrophysics Data System (ADS)
Tanaka, Saori; Nakazono, Kaoru; Nishida, Masafumi; Horiuchi, Yasuo; Ichikawa, Akira
Sign language is a visual language in which main articulators are hands, torso, head, and face. For simultaneous interpreters of Japanese sign language (JSL) and spoken Japanese, it is very important to recognize not only the hands movement but also prosody such like head, eye, posture and facial expression. This is because prosody has grammatical rules for representing the case and modification relations in JSL. The goal of this study is to introduce an examination called MPR (Measurement of Prosody Recognition) and to demonstrate that it can be an indicator for the other general skills of interpreters. For this purpose, we conducted two experiments: the first studies the relationship between the interpreter's experience and the performance score on MPR (Experiment-1), and the second investigates the specific skill that can be estimated by MPR (Experiment-2). The data in Experiment-1 came from four interpreters who had more than 1-year experience as interpreters, and more four interpreters who had less than 1-year experience. The mean accuracy of MPR in the more experienced group was higher than that in the less experienced group. The data in Experiment-2 came from three high MPR interpreters and three low MPR interpreters. Two hearing subjects and three deaf subjects evaluated their skill in terms of the speech or sign interpretation skill, the reliability of interpretation, the expeditiousness, and the subjective sense of accomplishment for the ordering pizza task. The two experiments indicated a possibility that MPR could be useful for estimating if the interpreter is sufficiently experienced to interpret from sign language to spoken Japanese, and if they can work on the interpretation expeditiously without making the deaf or the hearing clients anxious. Finally we end this paper with suggestions for conclusions and future work.
Using professional interpreters in undergraduate medical consultation skills teaching.
Bansal, Aarti; Swann, Jennifer; Smithson, William Henry
2014-01-01
The ability to work with interpreters is a core skill for UK medical graduates. At the University of Sheffield Medical School, this teaching was identified as a gap in the curriculum. Teaching was developed to use professional interpreters in role-play, based on evidence that professional interpreters improve health outcomes for patients with limited English proficiency. Other principles guiding the development of the teaching were an experiential learning format, integration to the core consultation skills curriculum, and sustainable delivery. The session was aligned with existing consultation skills teaching to retain the small-group experiential format and general practitioner (GP) tutor. Core curricular time was found through conversion of an existing consultation skills session. Language pairs of professional interpreters worked with each small group, with one playing patient and the other playing interpreter. These professional interpreters attended training in the scenarios so that they could learn to act as patient and family interpreter. GP tutors attended training sessions to help them facilitate the session. This enhanced the sustainability of the session by providing a cohort of tutors able to pass on their expertise to new staff through the existing shadowing process. Tutors felt that the involvement of professional interpreters improved student engagement. Student evaluation of the teaching suggests that the learning objectives were achieved. Faculty evaluation by GP tutors suggests that they perceived the teaching to be worthwhile and that the training they received had helped improve their own clinical practice in consulting through interpreters. We offer the following recommendations to others who may be interested in developing teaching on interpreted consultations within their core curriculum: 1) consider recruiting professional interpreters as a teaching resource; 2) align the teaching to existing consultation skills sessions to aid integration
Hands-on Materials for Teaching about Global Climate Change through Graph Interpretation
ERIC Educational Resources Information Center
Rule, Audrey C.; Hallagan, Jean E.; Shaffer, Barbara
2008-01-01
Teachers need to address global climate change with students in their classrooms as evidence for consequences from these environmental changes mounts. One way to approach global climate change is through examination of authentic data. Mathematics and science may be integrated by interpreting graphs from the professional literature. This study…
ERIC Educational Resources Information Center
Araujo, Ives Solano; Veit, Eliane Angela; Moreira, Marco Antonio
2008-01-01
The purpose of this study was to investigate undergraduate students' performance while exposed to complementary computational modelling activities to improve physics learning, using the software "Modellus." Interpretation of kinematics graphs was the physics topic chosen for investigation. The theoretical framework adopted was based on Halloun's…
Collaborative Robotic Instruction: A Graph Teaching Experience
ERIC Educational Resources Information Center
Mitnik, Ruben; Recabarren, Matias; Nussbaum, Miguel; Soto, Alvaro
2009-01-01
Graphing is a key skill in the study of Physics. Drawing and interpreting graphs play a key role in the understanding of science, while the lack of these has proved to be a handicap and a limiting factor in the learning of scientific concepts. It has been observed that despite the amount of previous graph-working experience, students of all ages…
Electrocardiographic interpretation skills of cardiology residents: are they competent?
Sibbald, Matthew; Davies, Edward G; Dorian, Paul; Yu, Eric H C
2014-12-01
Achieving competency at electrocardiogram (ECG) interpretation among cardiology subspecialty residents has traditionally focused on interpreting a target number of ECGs during training. However, there is little evidence to support this approach. Further, there are no data documenting the competency of ECG interpretation skills among cardiology residents, who become de facto the gold standard in their practice communities. We tested 29 Cardiology residents from all 3 years in a large training program using a set of 20 ECGs collected from a community cardiology practice over a 1-month period. Residents interpreted half of the ECGs using a standard analytic framework, and half using their own approach. Residents were scored on the number of correct and incorrect diagnoses listed. Overall diagnostic accuracy was 58%. Of 6 potentially life-threatening diagnoses, residents missed 36% (123 of 348) including hyperkalemia (81%), long QT (52%), complete heart block (35%), and ventricular tachycardia (19%). Residents provided additional inappropriate diagnoses on 238 ECGs (41%). Diagnostic accuracy was similar between ECGs interpreted using an analytic framework vs ECGs interpreted without an analytic framework (59% vs 58%; F(1,1333) = 0.26; P = 0.61). Cardiology resident proficiency at ECG interpretation is suboptimal. Despite the use of an analytic framework, there remain significant deficiencies in ECG interpretation among Cardiology residents. A more systematic method of addressing these important learning gaps is urgently needed.
NASA Astrophysics Data System (ADS)
Smit, Jantien; Bakker, Arthur; van Eerde, Dolly; Kuijpers, Maggie
2016-09-01
The importance of language in mathematics learning has been widely acknowledged. However, little is known about how to make this insight productive in the design and enactment of language-oriented mathematics education. In a design-based research project, we explored how language-oriented mathematics education can be designed and enacted. We drew on genre pedagogy to promote student proficiency in the language required for interpreting line graphs. In the intervention, the teacher used scaffolding strategies to focus students' attention on the structure and linguistic features of the language involved in this particular domain. The research question addressed in this paper is how student proficiency in this language may be promoted. The study comprised nine lessons involving 22 students in grades 5 and 6 (aged 10-12); of these students, 19 had a migrant background. In light of the research aim, we first describe the rationale behind our design. Next, we illustrate how the design was enacted by means of a case study focusing on one student in the classroom practice of developing proficiency in the language required for interpreting line graphs. On the basis of pre- and posttest scores, we conclude that overall their proficiency has increased. Together, the results indicate that and how genre pedagogy may be used to help students become more proficient in the language required in a mathematical domain.
Ruiz, Jorge G; Andrade, Allen D; Hogue, Christie; Karanam, Chandana; Akkineni, Sisir; Cevallos, David; Anam, Ramanakumar; Sharit, Joseph
2016-01-01
Personal health records (PHRs) are intended to increase patients' access to and ownership over their health care information for self-management purposes. The purpose of this study was to determine the association of graph literacy with adoption of an online PHR and, among adopters with self-reported skills, the frequency of use and intent to return to use the PHR . We conducted a cross-sectional survey of veterans receiving outpatient care. We measured health literacy, numeracy, graph literacy, and Internet and PHR adoption and use. We compared subgroups of veterans using analyses of covariance. We used hierarchical logistic regression models to estimate the effects of the literacy variables on PHR use. A total of 600 veterans (age = 22-94) participated in the survey. After we adjusted for known covariates, we found that adopters of a PHR were more likely to demonstrate higher health and graph literacy than nonadopters. Among PHR adopters, self-reported frequent and skillful users were more likely to have higher graph literacy than lower frequency and less skillful users. Adopters with higher intentions to return to use the PHR were more likely to show lower graph literacy than those less likely to return to use the PHR. Inadequate graph literacy was associated with lower adoption of a PHR and, among users, with lower self-reported frequent use and skills . As PHR use becomes more widespread, stakeholders will need to consider patients' levels of graph literacy when implementing PHRs.
ERIC Educational Resources Information Center
Van Dijk, Rick; Christoffels, Ingrid; Postma, Albert; Hermans, Daan
2012-01-01
In two experiments we investigated the relationship between the working memory skills of sign language interpreters and the quality of their interpretations. In Experiment 1, we found that scores on 3-back tasks with signs and words were not related to the quality of interpreted narratives. In Experiment 2, we found that memory span scores for…
ERIC Educational Resources Information Center
Pitts Bannister, Vanessa R.; Jamar, Idorenyin; Mutegi, Jomo W.
2007-01-01
In this article, the learning progress of one fifth-grade student is examined with regard to the development of her graph interpretation skills as she participated in the Junior Science Institute (JSI), a two-week, science intensive summer camp in which participants engaged in microbiology research and application. By showcasing the student's…
ERIC Educational Resources Information Center
Zeuch, Nina; Förster, Natalie; Souvignier, Elmar
2017-01-01
Learning progress assessment (LPA) provides formative information about effectiveness of instructional decisions. Learning curves are usually presented as graphical illustrations. However, little is known about teachers understanding and interpreting of graphically presented information. An instrument to measure competencies in reading graphs from…
ERIC Educational Resources Information Center
Hsu, P. -S.; Van Dyke, M.; Chen, Y.; Smith, T. J.
2015-01-01
The purpose of this quasi-experimental study was to explore how seventh graders in a suburban school in the United States developed argumentation skills and science knowledge in a project-based learning environment that incorporated a graph-oriented, computer-assisted application. A total of 54 students (three classes) comprised this treatment…
Interpretation of Radiological Images: Towards a Framework of Knowledge and Skills
ERIC Educational Resources Information Center
van der Gijp, A.; van der Schaaf, M. F.; van der Schaaf, I. C.; Huige, J. C. B. M.; Ravesloot, C. J.; van Schaik, J. P. J.; ten Cate, Th. J.
2014-01-01
The knowledge and skills that are required for radiological image interpretation are not well documented, even though medical imaging is gaining importance. This study aims to develop a comprehensive framework of knowledge and skills, required for two-dimensional and multiplanar image interpretation in radiology. A mixed-method study approach was…
NASA Astrophysics Data System (ADS)
Brungardt, John B.; Zollman, Dean
Real-time kinematical analysis of physical phenomenon is the graphing of displacement, velocity, and acceleration versus time data simultaneously with the motion of the object. Brasell (1987) found that students using real-time analysis with microcomputer-based laboratory tools significantly improved their kinematics graphing skills as compared to students using delayed-time graphing (kinematics graphs produced after the motion of the object). However, using computer reanimation of videotaped images, Beichner (1990) found no difference in student learning between the simultaneous-time (kinematics graphs produced simultaneously with the motion of the image of the object, such as a video-recorded image or a computer reanimated image) and the delayed-time treatments. This investigation considers student analysis of videodisc-recorded images, with treatments over an extended time. Using quantitative, qualitative, and retention data, we found no significant learning difference between using simultaneous-time and delayed-time analysis for student understanding of kinematics graphs. However, the results imply that simultaneous-time analysis may have advantages in some areas.Received: 18 November 1993; Revised: 7 September 1994;
ERIC Educational Resources Information Center
Wemyss, Thomas; van Kampen, Paul
2013-01-01
We have investigated the various approaches taken by first-year university students (n[image omitted]550) when asked to determine the direction of motion, the constancy of speed, and a numerical value of the speed of an object at a point on a numerical linear distance-time graph. We investigated the prevalence of various well-known general…
Landscape Interpretation with Augmented Reality and Maps to Improve Spatial Orientation Skill
ERIC Educational Resources Information Center
Carbonell Carrera, Carlos; Bermejo Asensio, Luis A.
2017-01-01
Landscape interpretation is needed for navigating and determining an orientation: with traditional cartography, interpreting 3D topographic information from 2D landform representations to get self-location requires spatial orientation skill. Augmented reality technology allows a new way to interact with 3D landscape representation and thereby…
Interpretation of radiological images: towards a framework of knowledge and skills.
van der Gijp, A; van der Schaaf, M F; van der Schaaf, I C; Huige, J C B M; Ravesloot, C J; van Schaik, J P J; Ten Cate, Th J
2014-10-01
The knowledge and skills that are required for radiological image interpretation are not well documented, even though medical imaging is gaining importance. This study aims to develop a comprehensive framework of knowledge and skills, required for two-dimensional and multiplanar image interpretation in radiology. A mixed-method study approach was applied. First, a literature search was performed to identify knowledge and skills that are important for image interpretation. Three databases, PubMed, PsycINFO and Embase, were searched for studies using synonyms of image interpretation skills or visual expertise combined with synonyms of radiology. Empirical or review studies concerning knowledge and skills for medical image interpretation were included and relevant knowledge and skill items were extracted. Second, a preliminary framework was built and discussed with nine selective experts in individual semi-structured interviews. The expert team consisted of four radiologists, one radiology resident, two education scientists, one cognitive psychologist and one neuropsychologist. The framework was optimised based on the experts comments. Finally, the framework was applied to empirical data, derived from verbal protocols of ten clerks interpreting two-dimensional and multiplanar radiological images. In consensus meetings adjustments were made to resolve discrepancies of the framework with the verbal protocol data. We designed a framework with three main components of image interpretation: perception, analysis and synthesis. The literature study provided four knowledge and twelve skill items. As a result of the expert interviews, one skill item was added and formulations of existing items were adjusted. The think-aloud experiment showed that all knowledge items and three of the skill items were applied within all three main components of the image interpretation process. The remaining framework items were apparent only within one of the main components. After combining
NASA Astrophysics Data System (ADS)
Beeken, Paul
2014-11-01
Graphing is an essential skill that forms the foundation of any physical science.1 Understanding the relationships between measurements ultimately determines which modeling equations are successful in predicting observations.2 Over the years, science and math teachers have approached teaching this skill with a variety of techniques. For secondary school instruction, the job of graphing skills falls heavily on physics teachers. By virtue of the nature of the topics we cover, it is our mission to develop this skill to the fine art that it is.
Should I call an interpreter?-How do physicians with second language skills decide?
Andres, Ellie; Wynia, Matthew; Regenstein, Marsha; Maul, Lauren
2013-05-01
Very little is known about how and when clinicians use their second language skills in patient care and when they rely on interpreters. The purpose of this study was to identify the factors most relevant to physicians' decision-making process when confronting the question of whether their language skills suffice to communicate effectively with patients in particular encounters. We conducted 25 in-depth, semi-structured telephone interviews with physicians in different practice settings who, while not native speakers, routinely interact with LEP patients using second language skills. Physicians consider a variety of factors in deciding whether to use their own language skills in clinical care, including their own and their patient's language proficiency, costs, convenience, and the clinical risk or complexity of the encounter. This study suggests the need for practical guidance and training for clinicians on the appropriate use of second language skills and interpreters in clinical care.
ERIC Educational Resources Information Center
Beeken, Paul
2014-01-01
Graphing is an essential skill that forms the foundation of any physical science. Understanding the relationships between measurements ultimately determines which modeling equations are successful in predicting observations. Over the years, science and math teachers have approached teaching this skill with a variety of techniques. For secondary…
NASA Astrophysics Data System (ADS)
Keller, Stacy Kathryn
This study examined how intermediate elementary students' mathematics and science background knowledge affected their interpretation of line graphs and how their interpretations were affected by graph question levels. A purposive sample of 14 6th-grade students engaged in think aloud interviews (Ericsson & Simon, 1993) while completing an excerpted Test of Graphing in Science (TOGS) (McKenzie & Padilla, 1986). Hand gestures were video recorded. Student performance on the TOGS was assessed using an assessment rubric created from previously cited factors affecting students' graphing ability. Factors were categorized using Bertin's (1983) three graph question levels. The assessment rubric was validated by Padilla and a veteran mathematics and science teacher. Observational notes were also collected. Data were analyzed using Roth and Bowen's semiotic process of reading graphs (2001). Key findings from this analysis included differences in the use of heuristics, self-generated questions, science knowledge, and self-motivation. Students with higher prior achievement used a greater number and variety of heuristics and more often chose appropriate heuristics. They also monitored their understanding of the question and the adequacy of their strategy and answer by asking themselves questions. Most used their science knowledge spontaneously to check their understanding of the question and the adequacy of their answers. Students with lower and moderate prior achievement favored one heuristic even when it was not useful for answering the question and rarely asked their own questions. In some cases, if students with lower prior achievement had thought about their answers in the context of their science knowledge, they would have been able to recognize their errors. One student with lower prior achievement motivated herself when she thought the questions were too difficult. In addition, students answered the TOGS in one of three ways: as if they were mathematics word problems
ERIC Educational Resources Information Center
Eshach, Haim
2010-01-01
One essential skill that students who learn physics should possess is the ability to create and interpret kinematic graphs. However, it is well documented in the literature that students show lack of competence in these abilities. They have problems in connecting graphs and physics concepts, as well as graphs and the real world. The present paper…
Skill Assessment in the Interpretation of 3D Fracture Patterns from Radiographs
Rojas-Murillo, Salvador; Hanley, Jessica M; Kreiter, Clarence D; Karam, Matthew D; Anderson, Donald D
2016-01-01
Abstract Background Interpreting two-dimensional radiographs to ascertain the three-dimensional (3D) position and orientation of fracture planes and bone fragments is an important component of orthopedic diagnosis and clinical management. This skill, however, has not been thoroughly explored and measured. Our primary research question is to determine if 3D radiographic image interpretation can be reliably assessed, and whether this assessment varies by level of training. A test designed to measure this skill among orthopedic surgeons would provide a quantitative benchmark for skill assessment and training research. Methods Two tests consisting of a series of online exercises were developed to measure this skill. Each exercise displayed a pair of musculoskeletal radiographs. Participants selected one of three CT slices of the same or similar fracture patterns that best matched the radiographs. In experiment 1, 10 orthopedic residents and staff responded to nine questions. In experiment 2, 52 residents from both orthopedics and radiology responded to 12 questions. Results Experiment 1 yielded a Cronbach alpha of 0.47. Performance correlated with experience; r(8) = 0.87, p<0.01, suggesting that the test could be both valid and reliable with a slight increase in test length. In experiment 2, after removing three non-discriminating items, the Cronbach coefficient alpha was 0.28 and performance correlated with experience; r(50) = 0.25, p<0.10. Conclusions Although evidence for reliability and validity was more compelling with the first experiment, the analyses suggest motivation and test duration are important determinants of test efficacy. The interpretation of radiographs to discern 3D information is a promising and a relatively unexplored area for surgical skill education and assessment. The online test was useful and reliable. Further test development is likely to increase test effectiveness. Clinical Relevance Accurately interpreting radiographic images is an
The Impact of Microcomputer-Based Science Labs on Children's Graphing Skills.
ERIC Educational Resources Information Center
Mokros, Janice R.
Microcomputer-based laboratories (MBL), the use of microcomputers for student-directed data acquisition and analysis, represents a promising new development in science laboratory instruction. This descriptive study determined the impact of MBLs on middle school students' understanding of graphs of distance and velocity. The study was based on the…
ERIC Educational Resources Information Center
Jones, Bruce William
The results of implementing computer-assisted instruction (CAI) in two religion courses and a logic course at California State College, Bakersfield, are examined along with student responses. The main purpose of the CAI project was to teach interpretive skills. The most positive results came in the logic course. The programs in the New Testament…
ERIC Educational Resources Information Center
Lawrence, Virginia
No longer just a user of commercial software, the 21st century teacher is a designer of interactive software based on theories of learning. This software, a comprehensive study of straightline equations, enhances conceptual understanding, sketching, graphic interpretive and word problem solving skills as well as making connections to real-life and…
ERIC Educational Resources Information Center
Omeroglu, Esra; Buyukozturk, Sener; Aydogan, Yasemin; Cakan, Mehtap; Cakmak, Ebru Kilic; Ozyurek, Arzu; Akduman, Gulumser Gultekin; Gunindi, Yunus; Kutlu, Omer; Coban, Aysel; Yurt, Ozlem; Kogar, Hakan; Karayol, Seda
2015-01-01
This study aimed to determine and interpret norms of the Preschool Social Skills Rating Scale (PSSRS) teacher form. The sample included 224 independent preschools and 169 primary schools. The schools are distributed among 48 provinces and 3324 children were included. Data were obtained from the PSSRS teacher form. The validity and reliability…
ERIC Educational Resources Information Center
Klockare, Ellinor; Gustafsson, Henrik; Nordin-Bates, Sanna M.
2011-01-01
The aim of this study was to examine how dance teachers work with psychological skills with their students in class. Semi-structured interviews were conducted with six female professional teachers in jazz, ballet and contemporary dance. The interview transcripts were analyzed using interpretative phenomenological analysis (Smith 1996). Results…
ERIC Educational Resources Information Center
Oakhill, Jane; Cain, Kate; Nesi, Barbara
2016-01-01
This article reports a study in which good and poor comprehenders (in 2 age groups: 8- and 10-year-olds) read short passages containing phrases that could be interpreted as idiomatic or not, depending on the context. Familiarity was manipulated by including real (English) idioms and novel (translations of Italian) idioms. Reading times for the…
ERIC Educational Resources Information Center
Dori, Yehudit J.; Sasson, Irit
2008-01-01
The case-based computerized laboratory (CCL) is a chemistry learning environment that integrates computerized experiments with emphasis on scientific inquiry and comprehension of case studies. The research objective was to investigate chemical understanding and graphing skills of high school honors students via bidirectional visual and textual…
Predictors of Knowledge and Image Interpretation Skill Development in Radiology Residents.
Ravesloot, Cécile J; van der Schaaf, Marieke F; Kruitwagen, Cas L J J; van der Gijp, Anouk; Rutgers, Dirk R; Haaring, Cees; Ten Cate, Olle; van Schaik, Jan P J
2017-04-11
Purpose To investigate knowledge and image interpretation skill development in residency by studying scores on knowledge and image questions on radiology tests, mediated by the training environment. Materials and Methods Ethical approval for the study was obtained from the ethical review board of the Netherlands Association for Medical Education. Longitudinal test data of 577 of 2884 radiology residents who took semiannual progress tests during 5 years were retrospectively analyzed by using a nonlinear mixed-effects model taking training length as input variable. Tests included nonimage and image questions that assessed knowledge and image interpretation skill. Hypothesized predictors were hospital type (academic or nonacademic), training hospital, enrollment age, sex, and test date. Results Scores showed a curvilinear growth during residency. Image scores increased faster during the first 3 years of residency and reached a higher maximum than knowledge scores (55.8% vs 45.1%). The slope of image score development versus knowledge question scores of 1st-year residents was 16.8% versus 12.4%, respectively. Training hospital environment appeared to be an important predictor in both knowledge and image interpretation skill development (maximum score difference between training hospitals was 23.2%; P < .001). Conclusion Expertise developed rapidly in the initial years of radiology residency and leveled off in the 3rd and 4th training year. The shape of the curve was mainly influenced by the specific training hospital. (©) RSNA, 2017 Online supplemental material is available for this article.
Measures of Fine Motor Skills in People with Tremor Disorders: Appraisal and Interpretation
Norman, Kathleen E.; Héroux, Martin E.
2013-01-01
People with Parkinson’s disease, essential tremor, or other movement disorders involving tremor have changes in fine motor skills that are among the hallmarks of these diseases. Numerous measurement tools have been created and other methods devised to measure such changes in fine motor skills. Measurement tools may focus on specific features – e.g., motor skills or dexterity, slowness in movement execution associated with parkinsonian bradykinesia, or magnitude of tremor. Less obviously, some tools may be better suited than others for specific goals such as detecting subtle dysfunction early in disease, revealing aspects of brain function affected by disease, or tracking changes expected from treatment or disease progression. The purpose of this review is to describe and appraise selected measurement tools of fine motor skills appropriate for people with tremor disorders. In this context, we consider the tools’ content – i.e., what movement features they focus on. In addition, we consider how measurement tools of fine motor skills relate to measures of a person’s disease state or a person’s function. These considerations affect how one should select and interpret the results of these tools in laboratory and clinical contexts. PMID:23717299
ERIC Educational Resources Information Center
Jackson, David F.; And Others
Recent research has demonstrated the promise of graphing software as an aid to teaching graphs in two content areas: line graphs of aspects of motion and graphs of algebraic functions. This study attempted to generalize the idea of computer-assisted graphing to include the use of several kinds of graphs to solve a wider range of problems. A unit…
ERIC Educational Resources Information Center
Flowers, Emily
This manual contains 56 teacher-developed activities which can be used in social studies courses to improve students' basic skills. The activities teach location and map skills, writing and study skills, time skills, and thinking skills. Students also learn how to use reference books and how to read and interpret charts and graphs. Each activity…
Martínez-Santiago, Oscar; Millán-Cabrera, Reisel; Marrero-Ponce, Yovani; Barigye, Stephen J; Martínez-López, Yoan; Torrens, Francisco; Pérez-Giménez, Facundo
2014-05-01
indices and other 0-3D MDs is demonstrated by using principal component analysis on a dataset of 41 heterogeneous molecules. It is concluded that the graph derivative indices are independent indices containing important structural information to be used in QSPR/QSAR and drug design studies, and permit obtaining easier, more interpretable and robust mathematical models than the majority of those reported in the literature.
ERIC Educational Resources Information Center
Texas Education Agency, Austin.
The Texas Assessment of Basic Skills (TABS) helps to improve basic skills mastery by assessing student achievement and district performance levels in reading, writing and mathematics. TABS was designed to provide information for instructional planning in the state-funded compensatory education service. Minimum competency objectives are to be…
ERIC Educational Resources Information Center
Bond, Clare Elizabeth; Philo, Chris; Shipton, Zoe Kai
2011-01-01
A key challenge in university geoscience teaching is to give students the skills to cope with uncertainty. Professional geoscientists can rarely be certain of the "right answer" to problems posed by most geological datasets, and reasoning through this uncertainty, being intelligently flexible in interpreting data which are limited in resolution…
ERIC Educational Resources Information Center
Burns, Jacqueline
2016-01-01
A company or government is only as good as its most qualified employees. This qualitative interpretative phenomenological study sought to understand what skills are needed to supervise government information technology (IT) project managers through their lived experience. Fifteen participants in the field of government IT were interviewed. They…
Schaff, Pamela B; Isken, Suzanne; Tager, Robert M
2011-10-01
Many medical schools have incorporated experiences with representational or figurative art into the curriculum in an effort to improve learners' powers of observation, visual diagnostic skills, and pattern recognition skills or to enhance communication skills, foster teamwork, and/or improve empathy. The Keck School of Medicine of the University of Southern California has partnered with Los Angeles' Museum of Contemporary Art to design an educational experience with the goal of honing students' abilities to observe, describe, and interpret complex information. The authors discovered that through a constructivist approach to viewing and discussing nonrepresentational, contemporary art, students were able not only to apply their observational and interpretive skills in a safe, nonclinical setting but also to accept the facts that ambiguity is inherent to art, life, and clinical experience and that there can be more than one answer to many questions. This intervention, entailing extensive guided inquiry, collaborative thinking, and process work, has allowed students and faculty to reflect on the parallel processes at work in clinical practice and art interpretation. In patient encounters, physicians (and physicians-in-training) begin with attention and observation, continue with multiple interpretations of that which they observe, move to sorting through often ambiguous evidence, proceed to collaboration within a community of observers, and finally move to consensus and direction for action. In the worlds of both art and medicine, individuals imagine experiences beyond their own and test hypotheses by integrating their own prior knowledge and intuition and by comparing their evidence with that of others.
NASA Astrophysics Data System (ADS)
Bellac, Michel Le
2014-11-01
Although nobody can question the practical efficiency of quantum mechanics, there remains the serious question of its interpretation. As Valerio Scarani puts it, "We do not feel at ease with the indistinguishability principle (that is, the superposition principle) and some of its consequences." Indeed, this principle which pervades the quantum world is in stark contradiction with our everyday experience. From the very beginning of quantum mechanics, a number of physicists--but not the majority of them!--have asked the question of its "interpretation". One may simply deny that there is a problem: according to proponents of the minimalist interpretation, quantum mechanics is self-sufficient and needs no interpretation. The point of view held by a majority of physicists, that of the Copenhagen interpretation, will be examined in Section 10.1. The crux of the problem lies in the status of the state vector introduced in the preceding chapter to describe a quantum system, which is no more than a symbolic representation for the Copenhagen school of thought. Conversely, one may try to attribute some "external reality" to this state vector, that is, a correspondence between the mathematical description and the physical reality. In this latter case, it is the measurement problem which is brought to the fore. In 1932, von Neumann was first to propose a global approach, in an attempt to build a purely quantum theory of measurement examined in Section 10.2. This theory still underlies modern approaches, among them those grounded on decoherence theory, or on the macroscopic character of the measuring apparatus: see Section 10.3. Finally, there are non-standard interpretations such as Everett's many worlds theory or the hidden variables theory of de Broglie and Bohm (Section 10.4). Note, however, that this variety of interpretations has no bearing whatsoever on the practical use of quantum mechanics. There is no controversy on the way we should use quantum mechanics!
NASA Astrophysics Data System (ADS)
Davies, Daniel John; Collier, Christopher; Howe, Alan
2012-11-01
not been sustained. While there is evidence of pupils developing a range of scientific enquiry skills through the project, the extent to which their interpretation of data improved is unclear. All participating schools made greater use of scientific data than before the project to develop their environmental education. Conclusions: The project has demonstrated the potential of combining datalogging with GPS technology to support challenging, motivating and relevant scientific enquiry. Primary teachers require targeted technical and pedagogical support to maximise learning benefits for pupils.
Understanding graphs with two independent variables
NASA Astrophysics Data System (ADS)
Cooper, Jennifer L.
Adults are not necessarily competent users of graphs with two independent variables, despite the frequency of this representational format. The three tasks in this thesis address the impact of interpretation statements and graph patterns. Interpretation statements were based on the statistical effects -- simple effects, main effects, and interactions. Graph patterns were systematically varied based on a novel classification scheme of graphs with two IVs. I suggest that the complexity of a graph's data pattern depends on the consistency of the simple effects' directions and magnitudes. In the first study, undergraduates constructed graphs based on statements about data patterns. Errors reflected a misunderstanding of how two IVs could be combined and represented graphically. When the experimental group had graph-relevant information added (variable labels spatially located on axes), the ability to represent the relationships among the IVs significantly increased. The ability to satisfy the constraints imposed by the statements was not affected. Adding labels specifically targeted skills relevant to graphical literacy. Transfer to a third trial was stronger for those of higher math abilities. The second study focused on the effect of an introductory statistics course. Overall, undergraduates performed well on statements describing the simple effects of the IVs. However, even though they improved from Time 1 to Time 2 for interaction statements, performance on statements about main effects and interactions still showed considerable room for improvement. In the third study, repeated trials of the 20 patterns proposed by the simple effects consistency model established that the proposed classification scheme addresses additional sources of variability in reasoning with graphs (i.e., sources not captured by traditional classification schemes). As the complexity level of the data pattern increased, performance (based on accuracy and RT) decreased, with parallel impacts on
Exploring and Making Sense of Large Graphs
2015-08-01
our fast algorithmic methodologies, we also contribute graph-theoretical ideas and models, and real-world applications in two main areas ??? Single ...Graph Exploration: We show how to interpretably summarize a single graph by identifying its important graph structures. We complement summarization with...effectively learn information about the unknown entities. ??? Multiple-Graph Exploration: We extend the idea of single -graph summarization to time
Expert and Novice Approaches to Using Graphs: Evidence from Eye-Track Experiments
NASA Astrophysics Data System (ADS)
Wirth, K. R.; Lindgren, J. M.
2015-12-01
Professionals and students in geology use an array of graphs to study the earth, but relatively little detail is known about how users interact with these graphs. Comprehension of graphical information in the earth sciences is further complicated by the common use of non-traditional formats (e.g., inverted axes, logarithmic scales, normalized plots, ternary diagrams). Many educators consider graph-reading skills an important outcome of general education science curricula, so it is critical that we understand both the development of graph-reading skills and the instructional practices that are most efficacious. Eye-tracking instruments provide quantitative information about eye movements and offer important insights into the development of expertise in graph use. We measured the graph reading skills and eye movements of novices (students with a variety of majors and educational attainment) and experts (faculty and staff from a variety of disciplines) while observing traditional and non-traditional graph formats. Individuals in the expert group consistently demonstrated significantly greater accuracy in responding to questions (e.g., retrieval, interpretation, prediction) about graphs. Among novices, only the number of college math and science courses correlated with response accuracy. Interestingly, novices and experts exhibited similar eye-tracks when they first encountered a new graph; they typically scanned through the title, x and y-axes, and data regions in the first 5-15 seconds. However, experts are readily distinguished from novices by a greater number of eye movements (20-35%) between the data and other graph elements (e.g., title, x-axis, y-axis) both during and after the initial orientation phase. We attribute the greater eye movements between the different graph elements an outcome of the generally better-developed self-regulation skills (goal-setting, monitoring, self-evaluation) that likely characterize individuals in our expert group.
ERIC Educational Resources Information Center
Hsu, P.-S.; Van Dyke, M.; Chen, Y.; Smith, T. J.
2016-01-01
The purpose of this mixed-methods study was to explore how seventh graders in a suburban school in the United States and sixth graders in an urban school in Taiwan developed argumentation skills and science knowledge in a project-based learning environment that incorporated a graph-oriented, computer-assisted application (GOCAA). A total of 42…
Expanding our understanding of students' use of graphs for learning physics
NASA Astrophysics Data System (ADS)
Laverty, James T.
It is generally agreed that the ability to visualize functional dependencies or physical relationships as graphs is an important step in modeling and learning. However, several studies in Physics Education Research (PER) have shown that many students in fact do not master this form of representation and even have misconceptions about the meaning of graphs that impede learning physics concepts. Working with graphs in classroom settings has been shown to improve student abilities with graphs, particularly when the students can interact with them. We introduce a novel problem type in an online homework system, which requires students to construct the graphs themselves in free form, and requires no hand-grading by instructors. A study of pre/post-test data using the Test of Understanding Graphs in Kinematics (TUG-K) over several semesters indicates that students learn significantly more from these graph construction problems than from the usual graph interpretation problems, and that graph interpretation alone may not have any significant effect. The interpretation of graphs, as well as the representation translation between textual, mathematical, and graphical representations of physics scenarios, are frequently listed among the higher order thinking skills we wish to convey in an undergraduate course. But to what degree do we succeed? Do students indeed employ higher order thinking skills when working through graphing exercises? We investigate students working through a variety of graph problems, and, using a think-aloud protocol, aim to reconstruct the cognitive processes that the students go through. We find that to a certain degree, these problems become commoditized and do not trigger the desired higher order thinking processes; simply translating ``textbook-like'' problems into the graphical realm will not achieve any additional educational goals. Whether the students have to interpret or construct a graph makes very little difference in the methods used by the
Schulz, Martin; Arnold, Dorian
2007-06-12
GraphLib is a support library used by other tools to create, manipulate, store, and export graphs. It provides a simple interface to specifS arbitrary directed and undirected graphs by adding nodes and edges. Each node and edge can be associated with a set of attributes describing size, color, and shape. Once created, graphs can be manipulated using a set of graph analysis algorithms, including merge, prune, and path coloring operations. GraphLib also has the ability to export graphs into various open formats such as DOT and GML.
ERIC Educational Resources Information Center
Gultepe, Nejla; Kilic, Ziya
2015-01-01
This study was conducted in order to determine the differences in integrated scientific process skills (designing experiments, forming data tables, drawing graphs, graph interpretation, determining the variables and hypothesizing, changing and controlling variables) of students (n = 17) who were taught with an approach based on scientific…
Evolutionary stability on graphs
Ohtsuki, Hisashi; Nowak, Martin A.
2008-01-01
Evolutionary stability is a fundamental concept in evolutionary game theory. A strategy is called an evolutionarily stable strategy (ESS), if its monomorphic population rejects the invasion of any other mutant strategy. Recent studies have revealed that population structure can considerably affect evolutionary dynamics. Here we derive the conditions of evolutionary stability for games on graphs. We obtain analytical conditions for regular graphs of degree k > 2. Those theoretical predictions are compared with computer simulations for random regular graphs and for lattices. We study three different update rules: birth-death (BD), death-birth (DB), and imitation (IM) updating. Evolutionary stability on sparse graphs does not imply evolutionary stability in a well-mixed population, nor vice versa. We provide a geometrical interpretation of the ESS condition on graphs. PMID:18295801
ERIC Educational Resources Information Center
Abdullah, Muhammad Ridhuan Tony Lim; Siraj, Saedah; Asra; Hussin, Zaharah
2014-01-01
In the field of distance education, learning mediated through mobile technology or mobile learning (mLearning) has rapidly building a repertoire of influence in distance education research. This paper aims to propose an mLearning curriculum implementation model for English Language and Communication skills course among undergraduates using…
ERIC Educational Resources Information Center
van den Berge, Kees; van Gog, Tamara; Mamede, Silvia; Schmidt, Henk G.; van Saase, Jan L. C. M.; Rikers, Remy M. J. P.
2013-01-01
Research has shown that for acquiring problem-solving skills, instruction consisting of studying worked examples is more effective and efficient for novice learners than instruction consisting of problem-solving. This study investigated whether worked examples would also be a useful instructional format for the acquisition of visual perceptual…
Conceptual graphs for semantics and knowledge processing
Fargues, J.; Landau, M.C.; Dugourd, A.; Catach, L.
1986-01-01
This paper discusses the representational and algorithmic power of the conceptual graph model for natural language semantics and knowledge processing. Also described is a Prolog-like resolution method for conceptual graphs, which allows to perform deduction on very large semantic domains. The interpreter developed is similar to a Prolog interpreter in which the terms are any conceptual graphs and in which the unification algorithm is replaced by a specialized algorithm for conceptual graphs.
K-6 Social Studies Skills for the Human Behavior and Urban Studies Program.
ERIC Educational Resources Information Center
Banks, Samuel L., Ed.
This guide was developed to aid elementary students deal with life experiences through skill development. Major skills stressed are: locating, organizing, and evaluating information; acquiring information through listening, observing, and reading; communicating orally and in writing; interpreting pictures, charts, graphs, and tables; and working…
Advantages of Micro-Based Labs: Electronic Data Acquisition, Computerized Graphing, or Both?
ERIC Educational Resources Information Center
Stuessy, Carol L.; Rowland, Paul M.
1989-01-01
Discusses a microcomputer-based laboratory (MBL) study (n=75) which uses multiple temperature gathering devices (mercury thermometer, digital thermometer, and computer probe) and graphing methods (hand graphs, delayed computer graphs, and real-time graphs). Reports that MBL real-time graphing provides significant increases in graphing skills. (MVL)
Arvind; Gostelow, K.P.
1982-02-01
The author argues that by giving a unique name to every activity generated during a computation, the u-interpreter can provide greater concurrency in the interpretation of data flow graphs. 19 references.
ERIC Educational Resources Information Center
Lewe, Glenda
1994-01-01
Key skills required in the total quality workplace are cross-functional teaming, interpreting charts/graphs, oral communication, brainstorming, understanding cause/effect, categorizing ideas, critical pathing, formulating suggestions, analyzing the needs of internal and external customers, and writing status reports. (SK)
Spear, Jack; Fields, Lanny
2015-12-01
Interpreting and describing complex information shown in graphs are essential skills to be mastered by students in many disciplines; both are skills that are difficult to learn. Thus, interventions that produce these outcomes are of great value. Previous research showed that conditional discrimination training that established stimulus control by some elements of graphs and their printed descriptions produced some improvement in the accuracy of students' written descriptions of graphs. In the present experiment, students wrote nearly perfect descriptions of the information conveyed in interaction-based graphs after the establishment of conditional relations between graphs and their printed descriptions. This outcome was achieved with the use of special conditional discrimination training procedures that required participants to attend to many of the key elements of the graphs and the phrases in the printed descriptions that corresponded to the elements in the graphs. Thus, students learned to write full descriptions of the information represented by complex graphs by an automated training procedure that did not involve the direct training of writing.
ERIC Educational Resources Information Center
Connery, Keely Flynn
2007-01-01
Graphing predictions is especially important in classes where relationships between variables need to be explored and derived. In this article, the author describes how his students sketch the graphs of their predictions before they begin their investigations on two laboratory activities: Distance Versus Time Cart Race Lab and Resistance; and…
ERIC Educational Resources Information Center
Gowda, Veena Bhaskar S.; Nagaiah, Bhaskar Hebbani; Sengodan, Bharathi
2016-01-01
Medical students build clinical knowledge on the grounds of previously obtained basic knowledge. The study aimed to evaluate the competency of third year medical students to interpret biochemically based clinical scenarios using knowledge and skills gained during year 1 and 2 of undergraduate medical training. Study was conducted on year 3 MBBS…
Scenario Graphs and Attack Graphs
2004-04-14
46 6.1 Vulnerability Analysis of a Network . . . . . . . . . . . . . . . . . . . . . . . . . 53 6.2 Sandia Red Team Attack Graph...asymptotic bound. The test machine was a 1Ghz Pentium III with 1GB of RAM, running Red Hat Linux 7.3. Figure 4.1(a) plots running time of the implemen...host scanning tools network information vulnerability Attack Graph network Red
Sanfilippo, Antonio P.
2005-12-27
Graph theory is a branch of discrete combinatorial mathematics that studies the properties of graphs. The theory was pioneered by the Swiss mathematician Leonhard Euler in the 18th century, commenced its formal development during the second half of the 19th century, and has witnessed substantial growth during the last seventy years, with applications in areas as diverse as engineering, computer science, physics, sociology, chemistry and biology. Graph theory has also had a strong impact in computational linguistics by providing the foundations for the theory of features structures that has emerged as one of the most widely used frameworks for the representation of grammar formalisms.
Noncommutative Riemannian geometry on graphs
NASA Astrophysics Data System (ADS)
Majid, Shahn
2013-07-01
We show that arising out of noncommutative geometry is a natural family of edge Laplacians on the edges of a graph. The family includes a canonical edge Laplacian associated to the graph, extending the usual graph Laplacian on vertices, and we find its spectrum. We show that for a connected graph its eigenvalues are strictly positive aside from one mandatory zero mode, and include all the vertex degrees. Our edge Laplacian is not the graph Laplacian on the line graph but rather it arises as the noncommutative Laplace-Beltrami operator on differential 1-forms, where we use the language of differential algebras to functorially interpret a graph as providing a 'finite manifold structure' on the set of vertices. We equip any graph with a canonical 'Euclidean metric' and a canonical bimodule connection, and in the case of a Cayley graph we construct a metric compatible connection for the Euclidean metric. We make use of results on bimodule connections on inner calculi on algebras, which we prove, including a general relation between zero curvature and the braid relations.
Helping Students Make Sense of Graphs: An Experimental Trial of SmartGraphs Software
ERIC Educational Resources Information Center
Zucker, Andrew; Kay, Rachel; Staudt, Carolyn
2014-01-01
Graphs are commonly used in science, mathematics, and social sciences to convey important concepts; yet students at all ages demonstrate difficulties interpreting graphs. This paper reports on an experimental study of free, Web-based software called SmartGraphs that is specifically designed to help students overcome their misconceptions regarding…
Adjusting protein graphs based on graph entropy.
Peng, Sheng-Lung; Tsay, Yu-Wei
2014-01-01
Measuring protein structural similarity attempts to establish a relationship of equivalence between polymer structures based on their conformations. In several recent studies, researchers have explored protein-graph remodeling, instead of looking a minimum superimposition for pairwise proteins. When graphs are used to represent structured objects, the problem of measuring object similarity become one of computing the similarity between graphs. Graph theory provides an alternative perspective as well as efficiency. Once a protein graph has been created, its structural stability must be verified. Therefore, a criterion is needed to determine if a protein graph can be used for structural comparison. In this paper, we propose a measurement for protein graph remodeling based on graph entropy. We extend the concept of graph entropy to determine whether a graph is suitable for representing a protein. The experimental results suggest that when applied, graph entropy helps a conformational on protein graph modeling. Furthermore, it indirectly contributes to protein structural comparison if a protein graph is solid.
Threshold Graph Limits and Random Threshold Graphs
Diaconis, Persi; Holmes, Susan; Janson, Svante
2010-01-01
We study the limit theory of large threshold graphs and apply this to a variety of models for random threshold graphs. The results give a nice set of examples for the emerging theory of graph limits. PMID:20811581
Helping Students Make Sense of Graphs: An Experimental Trial of SmartGraphs Software
NASA Astrophysics Data System (ADS)
Zucker, Andrew; Kay, Rachel; Staudt, Carolyn
2014-06-01
Graphs are commonly used in science, mathematics, and social sciences to convey important concepts; yet students at all ages demonstrate difficulties interpreting graphs. This paper reports on an experimental study of free, Web-based software called SmartGraphs that is specifically designed to help students overcome their misconceptions regarding graphs. SmartGraphs allows students to interact with graphs and provides hints and scaffolding to help students, if they need help. SmartGraphs activities can be authored to be useful in teaching and learning a variety of topics that use graphs (such as slope, velocity, half-life, and global warming). A 2-year experimental study in physical science classrooms was conducted with dozens of teachers and thousands of students. In the first year, teachers were randomly assigned to experimental or control conditions. Data show that students of teachers who use SmartGraphs as a supplement to normal instruction make greater gains understanding graphs than control students studying the same content using the same textbooks, but without SmartGraphs. Additionally, teachers believe that the SmartGraphs activities help students meet learning goals in the physical science course, and a great majority reported they would use the activities with students again. In the second year of the study, several specific variations of SmartGraphs were researched to help determine what makes SmartGraphs effective.
Sukumar, Sreenivas R.; Hong, Seokyong; Lee, Sangkeun; Lim, Seung-Hwan
2016-06-01
GraphBench is a benchmark suite for graph pattern mining and graph analysis systems. The benchmark suite is a significant addition to conducting apples-apples comparison of graph analysis software (databases, in-memory tools, triple stores, etc.)
The Feynman Identity for Planar Graphs
NASA Astrophysics Data System (ADS)
da Costa, G. A. T. F.
2016-08-01
The Feynman identity (FI) of a planar graph relates the Euler polynomial of the graph to an infinite product over the equivalence classes of closed nonperiodic signed cycles in the graph. The main objectives of this paper are to compute the number of equivalence classes of nonperiodic cycles of given length and sign in a planar graph and to interpret the data encoded by the FI in the context of free Lie superalgebras. This solves in the case of planar graphs a problem first raised by Sherman and sets the FI as the denominator identity of a free Lie superalgebra generated from a graph. Other results are obtained. For instance, in connection with zeta functions of graphs.
NASA Astrophysics Data System (ADS)
Warchalowski, Wiktor; Krawczyk, Malgorzata J.
2017-03-01
We found the Lindenmayer systems for line graphs built on selected fractals. We show that the fractal dimension of such obtained graphs in all analysed cases is the same as for their original graphs. Both for the original graphs and for their line graphs we identified classes of nodes which reflect symmetry of the graph.
Student Reasoning about Graphs in Different Contexts
ERIC Educational Resources Information Center
Ivanjek, Lana; Susac, Ana; Planinic, Maja; Andrasevic, Aneta; Milin-Sipus, Zeljka
2016-01-01
This study investigates university students' graph interpretation strategies and difficulties in mathematics, physics (kinematics), and contexts other than physics. Eight sets of parallel (isomorphic) mathematics, physics, and other context questions about graphs, which were developed by us, were administered to 385 first-year students at the…
Body Motion and Graphing. Working Paper.
ERIC Educational Resources Information Center
Nemirovsky, Ricardo; Tierney, Cornelia; Wright, Tracey
This paper explores children's efforts to make sense of graphs by analyzing two students' use of a computer-based motion detector. The analysis focuses on the students' growing understanding of the motion detector which enables them to plan their movements in order to create graphs and interpret them in terms of kinesthetic actions. Students…
Jacobs, Elizabeth A; Leos, Ginelle Sanchez; Rathouz, Paul J; Fu, Paul
2011-10-01
Language barriers in health care-a large and growing problem in the United States-contribute to disparities in health care quality and outcomes in populations with limited English proficiency. Providing access to adequate interpreter services has been shown to reduce health disparities in these populations. However, many health care organizations do not provide such services because of the perceived high cost. In this observational study we calculated the costs incurred by a group of California public hospitals that formed a network to make trained interpreters available via videoconference and telephone. We found that encounters in this network where interpreters helped patients and providers communicate lasted an average of 10.6 minutes and cost an average of $24.86 per encounter. Such costs should be weighed against the likely alternatives, such as the opportunity costs of having other hospital staff act as ad hoc interpreters; medical errors that could result from inadequate interpretation; and the fact that not providing such services may leave providers out of compliance with federal law. We also discuss ways in which providers could be compensated for providing interpreter services.
ERIC Educational Resources Information Center
Jansen, Amanda; Spitzer, Sandy M.
2009-01-01
In this study, we examined prospective middle school mathematics teachers' reflective thinking skills to understand how they learned from their own teaching practice when engaging in a modified lesson study experience. Our goal was to identify variations among prospective teachers' descriptions of students' thinking and frequency of their…
ERIC Educational Resources Information Center
Webber, Hannah; Nelson, Sarah J.; Weatherbee, Ryan; Zoellick, Bill; Schauffler, Molly
2014-01-01
Data literacy is complex. When students investigate the natural world, they must be able to gather data, organize it in tables and spreadsheets, analyze it in context, and describe and interpret it--usually as evidence to support a scientific argument. These skills are echoed in the science and engineering practices of the "Next Generation…
Measuring Graph Comprehension, Critique, and Construction in Science
ERIC Educational Resources Information Center
Lai, Kevin; Cabrera, Julio; Vitale, Jonathan M.; Madhok, Jacquie; Tinker, Robert; Linn, Marcia C.
2016-01-01
Interpreting and creating graphs plays a critical role in scientific practice. The K-12 Next Generation Science Standards call for students to use graphs for scientific modeling, reasoning, and communication. To measure progress on this dimension, we need valid and reliable measures of graph understanding in science. In this research, we designed…
Can Comparison of Contrastive Examples Facilitate Graph Understanding?
ERIC Educational Resources Information Center
Smith, Linsey A.; Gentner, Dedre
2011-01-01
The authors explore the role of comparison in improving graph fluency. The ability to use graphs fluently is crucial for STEM achievement, but graphs are challenging to interpret and produce because they often involve integration of multiple variables, continuous change in variables over time, and omission of certain details in order to highlight…
ERIC Educational Resources Information Center
Hutson, Patricia Evonne
2013-01-01
The description of the self-defined expert instructional technologist is unclear. Technologists in the field are identified in various ways. To determine the characteristics and competencies of self-defined expert instructional technologists, an interpretive field study consisting of interviews was conducted. The results revealed three core…
Hopyan, T; Dennis, M; Weksberg, R; Cytrynbaum, C
2001-03-01
This paper studied music in 14 children and adolescents with Williams-Beuren syndrome (WBS), a multi-system neurodevelopmental disorder, and 14 age-matched controls. Five aspects of music were tested. There were two tests of core music domains, pitch discrimination and rhythm discrimination. There were two tests of musical expressiveness, melodic imagery and phrasing. There was one test of musical interpretation, the ability to identify the emotional resonance of a musical excerpt. Music scores were analyzed by means of logistic regressions that modeled outcome (higher or lower music scores) as a function of group membership (WBS or Control) and cognitive age. Compared to age peers, children with WBS had similar levels of musical expressiveness, but were less able to discriminate pitch and rhythm, or to attach a semantic interpretation to emotion in music. Music skill did not vary with cognitive age. Musical strength in individuals with WBS involves not so much formal analytic skill in pitch and rhythm discrimination as a strong engagement with music as a means of expression, play, and, perhaps, improvisation.
ERIC Educational Resources Information Center
Lawes, Jonathan F.
2013-01-01
Graphing polar curves typically involves a combination of three traditional techniques, all of which can be time-consuming and tedious. However, an alternative method--graphing the polar function on a rectangular plane--simplifies graphing, increases student understanding of the polar coordinate system, and reinforces graphing techniques learned…
Student reasoning about graphs in different contexts
NASA Astrophysics Data System (ADS)
Ivanjek, Lana; Susac, Ana; Planinic, Maja; Andrasevic, Aneta; Milin-Sipus, Zeljka
2016-06-01
This study investigates university students' graph interpretation strategies and difficulties in mathematics, physics (kinematics), and contexts other than physics. Eight sets of parallel (isomorphic) mathematics, physics, and other context questions about graphs, which were developed by us, were administered to 385 first-year students at the Faculty of Science, University of Zagreb. Students were asked to provide explanations and/or mathematical procedures with their answers. Students' main strategies and difficulties identified through the analysis of those explanations and procedures are described. Student strategies of graph interpretation were found to be largely context dependent and domain specific. A small fraction of students have used the same strategy in all three domains (mathematics, physics, and other contexts) on most sets of parallel questions. Some students have shown indications of transfer of knowledge in the sense that they used techniques and strategies developed in physics for solving (or attempting to solve) other context problems. In physics, the preferred strategy was the use of formulas, which sometimes seemed to block the use of other, more productive strategies which students displayed in other domains. Students' answers indicated the presence of slope-height confusion and interval-point confusion in all three domains. Students generally better interpreted graph slope than the area under a graph, although the concept of slope still seemed to be quite vague for many. The interpretation of the concept of area under a graph needs more attention in both physics and mathematics teaching.
Capacitated max -Batching with Interval Graph Compatibilities
NASA Astrophysics Data System (ADS)
Nonner, Tim
We consider the problem of partitioning interval graphs into cliques of bounded size. Each interval has a weight, and the weight of a clique is the maximum weight of any interval in the clique. This natural graph problem can be interpreted as a batch scheduling problem. Solving a long-standing open problem, we show NP-hardness, even if the bound on the clique sizes is constant. Moreover, we give a PTAS based on a novel dynamic programming technique for this case.
Intrinsic graph structure estimation using graph Laplacian.
Noda, Atsushi; Hino, Hideitsu; Tatsuno, Masami; Akaho, Shotaro; Murata, Noboru
2014-07-01
A graph is a mathematical representation of a set of variables where some pairs of the variables are connected by edges. Common examples of graphs are railroads, the Internet, and neural networks. It is both theoretically and practically important to estimate the intensity of direct connections between variables. In this study, a problem of estimating the intrinsic graph structure from observed data is considered. The observed data in this study are a matrix with elements representing dependency between nodes in the graph. The dependency represents more than direct connections because it includes influences of various paths. For example, each element of the observed matrix represents a co-occurrence of events at two nodes or a correlation of variables corresponding to two nodes. In this setting, spurious correlations make the estimation of direct connection difficult. To alleviate this difficulty, a digraph Laplacian is used for characterizing a graph. A generative model of this observed matrix is proposed, and a parameter estimation algorithm for the model is also introduced. The notable advantage of the proposed method is its ability to deal with directed graphs, while conventional graph structure estimation methods such as covariance selections are applicable only to undirected graphs. The algorithm is experimentally shown to be able to identify the intrinsic graph structure.
Statistical Literacy in Action: Should All Graphs Start at Zero?
ERIC Educational Resources Information Center
Watson, Jane
2015-01-01
Using statistical literacy skills to determine appropriate scales to be used on graphs is an essential part of numeracy. Using several meaningful contexts, this article explains very clearly when it is appropriate and inappropriate to begin the scale of a graph at zero.
Graphing and Percentage Applications Using the Personal Computer.
ERIC Educational Resources Information Center
Innes, Jay
1985-01-01
The paper describes how "IBM Graphing Assistant" and "Apple Softgraph" can foster a multifaceted approach to application of mathematical concepts and how a survey can be undertaken using the computer as word processor, data bank, and source of visual displays. Mathematical skills reinforced include estimating, rounding, graphing, and solving…
NASA Astrophysics Data System (ADS)
Miles, Erin
The purposes of this research study were to determine (a) in-service elementary teachers' familiarity, interest, conceptual knowledge of , and performance on science process skills and (b) how in-service elementary teachers' familiarity with, interest in conceptual knowledge of and performance on science process skills relate to each other. The science process skills include the basic skills [observation, classification, measuring, predicting, inferring, and communication,] and the integrated skills [hypothesizing, experimenting, identifying and controlling variables, formulating models, interpreting data, and graphing]. Twenty-four in-service elementary teachers enrolled in a master of math and science education degree program participated in this study. Participants completed questionnaires on their familiarity and interest in the science process skills, a science processes conceptual knowledge test, and a performance test on science process skills. Results indicate that these teachers were highly familiar with the science process skills, but moderately interested in these skills. Results also indicate that teachers were more interested in learning more about integrated process skills than basic process skills. Teachers possessed very low conceptual knowledge of the science process skills. However, teachers performed well on science process skills performance test. Significant correlations among the four constructs (familiarity, interest, conceptual knowledge and performance) were only significant between familiarity and interest. The implications, discussion and recommendations for future research and instruction on science process skills in teacher education programs have been presented.
On molecular graph comparison.
Melo, Jenny A; Daza, Edgar
2011-06-01
Since the last half of the nineteenth century, molecular graphs have been present in several branches of chemistry. When used for molecular structure representation, they have been compared after mapping the corresponding graphs into mathematical objects. However, direct molecular comparison of molecular graphs is a research field less explored. The goal of this mini-review is to show some distance and similarity coefficients which were proposed to directly compare molecular graphs or which could be useful to do so.
Gowda, Veena Bhaskar S; Nagaiah, Bhaskar Hebbani; Sengodan, Bharathi
2016-01-01
Medical students build clinical knowledge on the grounds of previously obtained basic knowledge. The study aimed to evaluate the competency of third year medical students to interpret biochemically based clinical scenarios using knowledge and skills gained during year 1 and 2 of undergraduate medical training. Study was conducted on year 3 MBBS students at AIMST University, Malaysia. Clinical scenarios (25) were constructed and administered to student volunteers, making sure at least one question from each system of year 2 was represented. Feedback was obtained on a five-point Likert scale regarding perception of learning biochemistry in MBBS year 1 versus 2. Mean score of test was 18 (72.11%). Performance was comparatively better in questions related to topics learnt in year 1 and reinforced in year 2 compared to those learnt for first time in year 2. In the feedback obtained, 31% strongly agreed and 56% agreed understanding the subject was helped more by learning biochemistry in year 2 than in year 1. Likewise, 36% strongly agreed and 56% agreed appreciating the importance of biochemistry in patient diagnosis was helped more by learning biochemistry in year 2 than year 1. Thirty one percent strongly agreed and 54% agreed that year 1 biochemistry would have been more relevant if case discussions were done simultaneously. Students retain basic science subjects better and appreciate the importance of basic sciences in patient diagnosis if they are reinforced in the context of clinical situations.
Graphing Inequalities, Connecting Meaning
ERIC Educational Resources Information Center
Switzer, J. Matt
2014-01-01
Students often have difficulty with graphing inequalities (see Filloy, Rojano, and Rubio 2002; Drijvers 2002), and J. Matt Switzer's students were no exception. Although students can produce graphs for simple inequalities, they often struggle when the format of the inequality is unfamiliar. Even when producing a correct graph of an…
ERIC Educational Resources Information Center
Reading Teacher, 2012
2012-01-01
The "Toolbox" column features content adapted from ReadWriteThink.org lesson plans and provides practical tools for classroom teachers. This issue's column features a lesson plan adapted from "Graphing Plot and Character in a Novel" by Lisa Storm Fink and "Bio-graph: Graphing Life Events" by Susan Spangler. Students retell biographic events…
ERIC Educational Resources Information Center
Kar, Tugrul
2016-01-01
This study examined prospective middle school mathematics teachers' problem-posing skills by investigating their ability to associate linear graphs with daily life situations. Prospective teachers were given linear graphs and asked to pose problems that could potentially be represented by the graphs. Their answers were analyzed in two stages. In…
Wong, Pak C.; Mackey, Patrick S.; Perrine, Kenneth A.; Foote, Harlan P.; Thomas, James J.
2008-12-23
Methods for visualizing a graph by automatically drawing elements of the graph as labels are disclosed. In one embodiment, the method comprises receiving node information and edge information from an input device and/or communication interface, constructing a graph layout based at least in part on that information, wherein the edges are automatically drawn as labels, and displaying the graph on a display device according to the graph layout. In some embodiments, the nodes are automatically drawn as labels instead of, or in addition to, the label-edges.
Considerations When Working with Interpreters.
ERIC Educational Resources Information Center
Hwa-Froelich, Deborah A.; Westby, Carol E.
2003-01-01
This article describes the current training and certification procedures in place for linguistic interpreters, the continuum of interpreter roles, and how interpreters' perspectives may influence the interpretive interaction. The specific skills needed for interpreting in either health care or educational settings are identified. A table compares…
Development of a Framework for Graph Choice and Construction
ERIC Educational Resources Information Center
Angra, Aakanksha; Gardner, Stephanie M.
2016-01-01
Research on graph interpretation and basic construction is extensive, and student difficulties, primarily in K-12 type settings, have been well documented [e.g., graph choice, labels for axes, variables, and scaling axes]. It is important to provide students with repeated opportunities to increase competency and practice critical reflection in…
NASA Astrophysics Data System (ADS)
Sui, Xiukai; Wu, Bin; Wang, Long
2015-12-01
The likelihood that a mutant fixates in the wild population, i.e., fixation probability, has been intensively studied in evolutionary game theory, where individuals' fitness is frequency dependent. However, it is of limited interest when it takes long to take over. Thus the speed of evolution becomes an important issue. In general, it is still unclear how fixation times are affected by the population structure, although the fixation times have already been addressed in the well-mixed populations. Here we theoretically address this issue by pair approximation and diffusion approximation on regular graphs. It is shown (i) that under neutral selection, both unconditional and conditional fixation time are shortened by increasing the number of neighbors; (ii) that under weak selection, for the simplified prisoner's dilemma game, if benefit-to-cost ratio exceeds the degree of the graph, then the unconditional fixation time of a single cooperator is slower than that in the neutral case; and (iii) that under weak selection, for the conditional fixation time, limited neighbor size dilutes the counterintuitive stochastic slowdown which was found in well-mixed populations. Interestingly, we find that all of our results can be interpreted as that in the well-mixed population with a transformed payoff matrix. This interpretation is also valid for both death-birth and birth-death processes on graphs. This interpretation bridges the fixation time in the structured population and that in the well-mixed population. Thus it opens the avenue to investigate the challenging fixation time in structured populations by the known results in well-mixed populations.
NASA Technical Reports Server (NTRS)
Lieberman, R. N.
1972-01-01
Given a directed graph, a natural topology is defined and relationships between standard topological properties and graph theoretical concepts are studied. In particular, the properties of connectivity and separatedness are investigated. A metric is introduced which is shown to be related to separatedness. The topological notions of continuity and homeomorphism. A class of maps is studied which preserve both graph and topological properties. Applications involving strong maps and contractions are also presented.
Recognition of Probe Ptolemaic Graphs
NASA Astrophysics Data System (ADS)
Chang, Maw-Shang; Hung, Ling-Ju
Let G denote a graph class. An undirected graph G is called a probe G graph if one can make G a graph in G by adding edges between vertices in some independent set of G. By definition graph class G is a subclass of probe G graphs. Ptolemaic graphs are chordal and induced gem free. They form a subclass of both chordal graphs and distance-hereditary graphs. Many problems NP-hard on chordal graphs can be solved in polynomial time on ptolemaic graphs. We proposed an O(nm)-time algorithm to recognize probe ptolemaic graphs where n and m are the numbers of vertices and edges of the input graph respectively.
Lothian, Josh; Powers, Sarah S; Sullivan, Blair D; Baker, Matthew B; Schrock, Jonathan; Poole, Stephen W
2013-12-01
The benchmarking effort within the Extreme Scale Systems Center at Oak Ridge National Laboratory seeks to provide High Performance Computing benchmarks and test suites of interest to the DoD sponsor. The work described in this report is a part of the effort focusing on graph generation. A previously developed benchmark, SystemBurn, allowed the emulation of dierent application behavior profiles within a single framework. To complement this effort, similar capabilities are desired for graph-centric problems. This report examines existing synthetic graph generator implementations in preparation for further study on the properties of their generated synthetic graphs.
Frishman, Yaniv; Tal, Ayellet
2008-01-01
This paper presents an algorithm for drawing a sequence of graphs online. The algorithm strives to maintain the global structure of the graph and thus the user's mental map, while allowing arbitrary modifications between consecutive layouts. The algorithm works online and uses various execution culling methods in order to reduce the layout time and handle large dynamic graphs. Techniques for representing graphs on the GPU allow a speedup by a factor of up to 17 compared to the CPU implementation. The scalability of the algorithm across GPU generations is demonstrated. Applications of the algorithm to the visualization of discussion threads in Internet sites and to the visualization of social networks are provided.
ERIC Educational Resources Information Center
Harris, David; Gomez Zwiep, Susan
2013-01-01
Graphs represent complex information. They show relationships and help students see patterns and compare data. Students often do not appreciate the illuminating power of graphs, interpreting them literally rather than as symbolic representations (Leinhardt, Zaslavsky, and Stein 1990). Students often read graphs point by point instead of seeing…
Turning Spreadsheets into Graphs: An Information Technology Lesson in Whole Brain Thinking
ERIC Educational Resources Information Center
Patterson, Thomas F.; Leonard, Jonathan G.
2005-01-01
We have concluded that teaching undergraduate students to use spreadsheet software to analyze, interpret, and communicate spreadsheet data through a graph is an information technology exercise in whole brain thinking. In investigating why our students have difficulty constructing proper graphs, we have discovered that graphing requires two…
Graphs, matrices, and the GraphBLAS: Seven good reasons
Kepner, Jeremy; Bader, David; Buluç, Aydın; ...
2015-01-01
The analysis of graphs has become increasingly important to a wide range of applications. Graph analysis presents a number of unique challenges in the areas of (1) software complexity, (2) data complexity, (3) security, (4) mathematical complexity, (5) theoretical analysis, (6) serial performance, and (7) parallel performance. Implementing graph algorithms using matrix-based approaches provides a number of promising solutions to these challenges. The GraphBLAS standard (istcbigdata.org/GraphBlas) is being developed to bring the potential of matrix based graph algorithms to the broadest possible audience. The GraphBLAS mathematically defines a core set of matrix-based graph operations that can be used to implementmore » a wide class of graph algorithms in a wide range of programming environments. This paper provides an introduction to the GraphBLAS and describes how the GraphBLAS can be used to address many of the challenges associated with analysis of graphs.« less
Graphs, matrices, and the GraphBLAS: Seven good reasons
Kepner, Jeremy; Bader, David; Buluç, Aydın; Gilbert, John; Mattson, Timothy; Meyerhenke, Henning
2015-01-01
The analysis of graphs has become increasingly important to a wide range of applications. Graph analysis presents a number of unique challenges in the areas of (1) software complexity, (2) data complexity, (3) security, (4) mathematical complexity, (5) theoretical analysis, (6) serial performance, and (7) parallel performance. Implementing graph algorithms using matrix-based approaches provides a number of promising solutions to these challenges. The GraphBLAS standard (istcbigdata.org/GraphBlas) is being developed to bring the potential of matrix based graph algorithms to the broadest possible audience. The GraphBLAS mathematically defines a core set of matrix-based graph operations that can be used to implement a wide class of graph algorithms in a wide range of programming environments. This paper provides an introduction to the GraphBLAS and describes how the GraphBLAS can be used to address many of the challenges associated with analysis of graphs.
Kernel-Based Reconstruction of Graph Signals
NASA Astrophysics Data System (ADS)
Romero, Daniel; Ma, Meng; Giannakis, Georgios B.
2017-02-01
A number of applications in engineering, social sciences, physics, and biology involve inference over networks. In this context, graph signals are widely encountered as descriptors of vertex attributes or features in graph-structured data. Estimating such signals in all vertices given noisy observations of their values on a subset of vertices has been extensively analyzed in the literature of signal processing on graphs (SPoG). This paper advocates kernel regression as a framework generalizing popular SPoG modeling and reconstruction and expanding their capabilities. Formulating signal reconstruction as a regression task on reproducing kernel Hilbert spaces of graph signals permeates benefits from statistical learning, offers fresh insights, and allows for estimators to leverage richer forms of prior information than existing alternatives. A number of SPoG notions such as bandlimitedness, graph filters, and the graph Fourier transform are naturally accommodated in the kernel framework. Additionally, this paper capitalizes on the so-called representer theorem to devise simpler versions of existing Thikhonov regularized estimators, and offers a novel probabilistic interpretation of kernel methods on graphs based on graphical models. Motivated by the challenges of selecting the bandwidth parameter in SPoG estimators or the kernel map in kernel-based methods, the present paper further proposes two multi-kernel approaches with complementary strengths. Whereas the first enables estimation of the unknown bandwidth of bandlimited signals, the second allows for efficient graph filter selection. Numerical tests with synthetic as well as real data demonstrate the merits of the proposed methods relative to state-of-the-art alternatives.
Reproducibility of graph metrics in FMRI networks.
Telesford, Qawi K; Morgan, Ashley R; Hayasaka, Satoru; Simpson, Sean L; Barret, William; Kraft, Robert A; Mozolic, Jennifer L; Laurienti, Paul J
2010-01-01
The reliability of graph metrics calculated in network analysis is essential to the interpretation of complex network organization. These graph metrics are used to deduce the small-world properties in networks. In this study, we investigated the test-retest reliability of graph metrics from functional magnetic resonance imaging data collected for two runs in 45 healthy older adults. Graph metrics were calculated on data for both runs and compared using intraclass correlation coefficient (ICC) statistics and Bland-Altman (BA) plots. ICC scores describe the level of absolute agreement between two measurements and provide a measure of reproducibility. For mean graph metrics, ICC scores were high for clustering coefficient (ICC = 0.86), global efficiency (ICC = 0.83), path length (ICC = 0.79), and local efficiency (ICC = 0.75); the ICC score for degree was found to be low (ICC = 0.29). ICC scores were also used to generate reproducibility maps in brain space to test voxel-wise reproducibility for unsmoothed and smoothed data. Reproducibility was uniform across the brain for global efficiency and path length, but was only high in network hubs for clustering coefficient, local efficiency, and degree. BA plots were used to test the measurement repeatability of all graph metrics. All graph metrics fell within the limits for repeatability. Together, these results suggest that with exception of degree, mean graph metrics are reproducible and suitable for clinical studies. Further exploration is warranted to better understand reproducibility across the brain on a voxel-wise basis.
ERIC Educational Resources Information Center
Hirsch, Christian R.
1975-01-01
Using a set of worksheets, students will discover and apply Euler's formula regarding connected planar graphs and play and analyze the game of Sprouts. One sheet leads to the discovery of Euler's formula; another concerns traversability of a graph; another gives an example and a game involving these ideas. (Author/KM)
ERIC Educational Resources Information Center
Lind, Joy; Narayan, Darren
2009-01-01
We present the topic of graph connectivity along with a famous theorem of Menger in the real-world setting of the national computer network infrastructure of "National LambdaRail". We include a set of exercises where students reinforce their understanding of graph connectivity by analysing the "National LambdaRail" network. Finally, we give…
Caetano, Tibério S; McAuley, Julian J; Cheng, Li; Le, Quoc V; Smola, Alex J
2009-06-01
As a fundamental problem in pattern recognition, graph matching has applications in a variety of fields, from computer vision to computational biology. In graph matching, patterns are modeled as graphs and pattern recognition amounts to finding a correspondence between the nodes of different graphs. Many formulations of this problem can be cast in general as a quadratic assignment problem, where a linear term in the objective function encodes node compatibility and a quadratic term encodes edge compatibility. The main research focus in this theme is about designing efficient algorithms for approximately solving the quadratic assignment problem, since it is NP-hard. In this paper we turn our attention to a different question: how to estimate compatibility functions such that the solution of the resulting graph matching problem best matches the expected solution that a human would manually provide. We present a method for learning graph matching: the training examples are pairs of graphs and the 'labels' are matches between them. Our experimental results reveal that learning can substantially improve the performance of standard graph matching algorithms. In particular, we find that simple linear assignment with such a learning scheme outperforms Graduated Assignment with bistochastic normalisation, a state-of-the-art quadratic assignment relaxation algorithm.
ERIC Educational Resources Information Center
Petrosino, Anthony
2012-01-01
This article responds to arguments by Skidmore and Thompson (this issue of "Educational Researcher") that a graph published more than 10 years ago was erroneously reproduced and "gratuitously damaged" perceptions of the quality of education research. After describing the purpose of the original graph, the author counters assertions that the graph…
ERIC Educational Resources Information Center
Shen, Ji
2009-01-01
In the Walking Out Graphs Lesson described here, students experience several types of representations used to describe motion, including words, sentences, equations, graphs, data tables, and actions. The most important theme of this lesson is that students have to understand the consistency among these representations and form the habit of…
Graphing from Everyday Experience.
ERIC Educational Resources Information Center
Carraher, David; Schliemann, Analucia; Nemirousky, Ricardo
1995-01-01
Discusses the importance of teaching grounded in the everyday experiences and concerns of the learners. Studies how people with limited school experience can understand graphs and concludes that individuals with limited academic education can clarify the role of everyday experiences in learning about graphs. (ASK)
ERIC Educational Resources Information Center
Johnson, Millie
1997-01-01
Graphs from media sources and questions developed from them can be used in the middle school mathematics classroom. Graphs depict storage temperature on a milk carton; air pressure measurements on a package of shock absorbers; sleep-wake patterns of an infant; a dog's breathing patterns; and the angle, velocity, and radius of a leaning bicyclist…
ERIC Educational Resources Information Center
Doto, Julianne; Golbeck, Susan
2007-01-01
Collecting data and analyzing the results of experiments is difficult for children. The authors found a surprising way to help their third graders make graphs and draw conclusions from their data: digital photographs. The pictures bridged the gap between an abstract graph and the plants it represented. With the support of the photos, students…
ERIC Educational Resources Information Center
Tyner, Bryan C.; Fienup, Daniel M.
2015-01-01
Graphing is socially significant for behavior analysts; however, graphing can be difficult to learn. Video modeling (VM) may be a useful instructional method but lacks evidence for effective teaching of computer skills. A between-groups design compared the effects of VM, text-based instruction, and no instruction on graphing performance.…
The Effect of Using Graphing Calculators in Complex Function Graphs
ERIC Educational Resources Information Center
Ocak, Mehmet Akif
2008-01-01
This study investigates the role of graphing calculators in multiple representations for knowledge transfer and the omission of oversimplification in complex function graphs. The main aim is to examine whether graphing calculators were used efficiently to see different cases and multiple perspectives among complex function graphs, or whether…
Asymptote Misconception on Graphing Functions: Does Graphing Software Resolve It?
ERIC Educational Resources Information Center
Öçal, Mehmet Fatih
2017-01-01
Graphing function is an important issue in mathematics education due to its use in various areas of mathematics and its potential roles for students to enhance learning mathematics. The use of some graphing software assists students' learning during graphing functions. However, the display of graphs of functions that students sketched by hand may…
Using Sorting Networks for Skill Building and Reasoning
ERIC Educational Resources Information Center
Andre, Robert; Wiest, Lynda R.
2007-01-01
Sorting networks, used in graph theory, have instructional value as a skill- building tool as well as an interesting exploration in discrete mathematics. Students can practice mathematics facts and develop reasoning and logic skills with this topic. (Contains 4 figures.)
Burioni, Raffaella; Chibbaro, Sergio; Vergni, Davide; Vulpiani, Angelo
2012-11-01
We study reaction-diffusion processes on graphs through an extension of the standard reaction-diffusion equation starting from first principles. We focus on reaction spreading, i.e., on the time evolution of the reaction product M(t). At variance with pure diffusive processes, characterized by the spectral dimension d{s}, the important quantity for reaction spreading is found to be the connectivity dimension d{l}. Numerical data, in agreement with analytical estimates based on the features of n independent random walkers on the graph, show that M(t)∼t{d{l}}. In the case of Erdös-Renyi random graphs, the reaction product is characterized by an exponential growth M(t)e{αt} with α proportional to ln(k), where (k) is the average degree of the graph.
A Semantic Graph Query Language
Kaplan, I L
2006-10-16
Semantic graphs can be used to organize large amounts of information from a number of sources into one unified structure. A semantic query language provides a foundation for extracting information from the semantic graph. The graph query language described here provides a simple, powerful method for querying semantic graphs.
Assortativity of complementary graphs
NASA Astrophysics Data System (ADS)
Wang, H.; Winterbach, W.; van Mieghem, P.
2011-09-01
Newman's measure for (dis)assortativity, the linear degree correlationρD, is widely studied although analytic insight into the assortativity of an arbitrary network remains far from well understood. In this paper, we derive the general relation (2), (3) and Theorem 1 between the assortativity ρD(G) of a graph G and the assortativityρD(Gc) of its complement Gc. Both ρD(G) and ρD(Gc) are linearly related by the degree distribution in G. When the graph G(N,p) possesses a binomial degree distribution as in the Erdős-Rényi random graphs Gp(N), its complementary graph Gpc(N) = G1-p(N) follows a binomial degree distribution as in the Erdős-Rényi random graphs G1-p(N). We prove that the maximum and minimum assortativity of a class of graphs with a binomial distribution are asymptotically antisymmetric: ρmax(N,p) = -ρmin(N,p) for N → ∞. The general relation (3) nicely leads to (a) the relation (10) and (16) between the assortativity range ρmax(G)-ρmin(G) of a graph with a given degree distribution and the range ρmax(Gc)-ρmin(Gc) of its complementary graph and (b) new bounds (6) and (15) of the assortativity. These results together with our numerical experiments in over 30 real-world complex networks illustrate that the assortativity range ρmax-ρmin is generally large in sparse networks, which underlines the importance of assortativity as a network characterizer.
Commuting projections on graphs
Vassilevski, Panayot S.; Zikatanov, Ludmil T.
2013-02-19
For a given (connected) graph, we consider vector spaces of (discrete) functions defined on its vertices and its edges. These two spaces are related by a discrete gradient operator, Grad and its adjoint, ₋Div, referred to as (negative) discrete divergence. We also consider a coarse graph obtained by aggregation of vertices of the original one. Then a coarse vertex space is identified with the subspace of piecewise constant functions over the aggregates. We consider the ℓ_{2}-projection Q_{H} onto the space of these piecewise constants. In the present paper, our main result is the construction of a projection π _{H} from the original edge-space onto a properly constructed coarse edge-space associated with the edges of the coarse graph. The projections π _{H} and Q_{H} commute with the discrete divergence operator, i.e., we have div π _{H} = Q_{H} div. The respective pair of coarse edge-space and coarse vertexspace offer the potential to construct two-level, and by recursion, multilevel methods for the mixed formulation of the graph Laplacian which utilizes the discrete divergence operator. The performance of one two-level method with overlapping Schwarz smoothing and correction based on the constructed coarse spaces for solving such mixed graph Laplacian systems is illustrated on a number of graph examples.
ERIC Educational Resources Information Center
Borovsky, Arielle; Elman, Jeffrey L.; Fernald, Anne
2012-01-01
Adults can incrementally combine information from speech with astonishing speed to anticipate future words. Concurrently, a growing body of work suggests that vocabulary ability is crucially related to lexical processing skills in children. However, little is known about this relationship with predictive sentence processing in children or adults.…
Clique graphs and overlapping communities
NASA Astrophysics Data System (ADS)
Evans, T. S.
2010-12-01
It is shown how to construct a clique graph in which properties of cliques of a fixed order in a given graph are represented by vertices in a weighted graph. Various definitions and motivations for these weights are given. The detection of communities or clusters is used to illustrate how a clique graph may be exploited. In particular a benchmark network is shown where clique graphs find the overlapping communities accurately while vertex partition methods fail.
Tyner, Bryan C; Fienup, Daniel M
2015-09-01
Graphing is socially significant for behavior analysts; however, graphing can be difficult to learn. Video modeling (VM) may be a useful instructional method but lacks evidence for effective teaching of computer skills. A between-groups design compared the effects of VM, text-based instruction, and no instruction on graphing performance. Participants who used VM constructed graphs significantly faster and with fewer errors than those who used text-based instruction or no instruction. Implications for instruction are discussed.
Proxy Graph: Visual Quality Metrics of Big Graph Sampling.
Nguyen, Quan-Hoang; Hong, Seok-Hee; Eades, Peter; Meidiana, Amyra
2017-02-24
Data sampling has been extensively studied for large scale graph mining. Many analyses and tasks become more efficient when performed on graph samples of much smaller size. The use of proxy objects is common in software engineering for analysis and interaction with heavy objects or systems. In this paper, we coin the term 'proxy graph' and empirically investigate how well a proxy graph visualization can represent a big graph. Our investigation focuses on proxy graphs obtained by sampling; this is one of the most common proxy approaches. Despite the plethora of data sampling studies, this is the first evaluation of sampling in the context of graph visualization. For an objective evaluation, we propose a new family of quality metrics for visual quality of proxy graphs. Our experiments cover popular sampling techniques. Our experimental results lead to guidelines for using sampling-based proxy graphs in visualization.
Higher-order graph wavelets and sparsity on circulant graphs
NASA Astrophysics Data System (ADS)
Kotzagiannidis, Madeleine S.; Dragotti, Pier Luigi
2015-08-01
The notion of a graph wavelet gives rise to more advanced processing of data on graphs due to its ability to operate in a localized manner, across newly arising data-dependency structures, with respect to the graph signal and underlying graph structure, thereby taking into consideration the inherent geometry of the data. In this work, we tackle the problem of creating graph wavelet filterbanks on circulant graphs for a sparse representation of certain classes of graph signals. The underlying graph can hereby be data-driven as well as fixed, for applications including image processing and social network theory, whereby clusters can be modelled as circulant graphs, respectively. We present a set of novel graph wavelet filter-bank constructions, which annihilate higher-order polynomial graph signals (up to a border effect) defined on the vertices of undirected, circulant graphs, and are localised in the vertex domain. We give preliminary results on their performance for non-linear graph signal approximation and denoising. Furthermore, we provide extensions to our previously developed segmentation-inspired graph wavelet framework for non-linear image approximation, by incorporating notions of smoothness and vanishing moments, which further improve performance compared to traditional methods.
Applied and computational harmonic analysis on graphs and networks
NASA Astrophysics Data System (ADS)
Irion, Jeff; Saito, Naoki
2015-09-01
In recent years, the advent of new sensor technologies and social network infrastructure has provided huge opportunities and challenges for analyzing data recorded on such networks. In the case of data on regular lattices, computational harmonic analysis tools such as the Fourier and wavelet transforms have well-developed theories and proven track records of success. It is therefore quite important to extend such tools from the classical setting of regular lattices to the more general setting of graphs and networks. In this article, we first review basics of graph Laplacian matrices, whose eigenpairs are often interpreted as the frequencies and the Fourier basis vectors on a given graph. We point out, however, that such an interpretation is misleading unless the underlying graph is either an unweighted path or cycle. We then discuss our recent effort of constructing multiscale basis dictionaries on a graph, including the Hierarchical Graph Laplacian Eigenbasis Dictionary and the Generalized Haar-Walsh Wavelet Packet Dictionary, which are viewed as generalizations of the classical hierarchical block DCTs and the Haar-Walsh wavelet packets, respectively, to the graph setting. Finally, we demonstrate the usefulness of our dictionaries by using them to simultaneously segment and denoise 1-D noisy signals sampled on regular lattices, a problem where classical tools have difficulty.
Ohio Guidelines for Educational Interpreters.
ERIC Educational Resources Information Center
Ohio State Dept. of Education, Columbus. Div. of Special Education.
This document presents Ohio's state guidelines to assist school districts in providing appropriate educational interpreting services for students who have hearing impairments. A section on the primary role of the educational interpreter considers: necessary knowledge and skills, modes of communication, interpreting environments, testing…
Optimized Graph Search Using Multi-Level Graph Clustering
NASA Astrophysics Data System (ADS)
Kala, Rahul; Shukla, Anupam; Tiwari, Ritu
Graphs find a variety of use in numerous domains especially because of their capability to model common problems. The social networking graphs that are used for social networking analysis, a feature given by various social networking sites are an example of this. Graphs can also be visualized in the search engines to carry search operations and provide results. Various searching algorithms have been developed for searching in graphs. In this paper we propose that the entire network graph be clustered. The larger graphs are clustered to make smaller graphs. These smaller graphs can again be clustered to further reduce the size of graph. The search is performed on the smallest graph to identify the general path, which may be further build up to actual nodes by working on the individual clusters involved. Since many searches are carried out on the same graph, clustering may be done once and the data may be used for multiple searches over the time. If the graph changes considerably, only then we may re-cluster the graph.
Flexibility in data interpretation: effects of representational format
Braithwaite, David W.; Goldstone, Robert L.
2013-01-01
Graphs and tables differentially support performance on specific tasks. For tasks requiring reading off single data points, tables are as good as or better than graphs, while for tasks involving relationships among data points, graphs often yield better performance. However, the degree to which graphs and tables support flexibility across a range of tasks is not well-understood. In two experiments, participants detected main and interaction effects in line graphs and tables of bivariate data. Graphs led to more efficient performance, but also lower flexibility, as indicated by a larger discrepancy in performance across tasks. In particular, detection of main effects of variables represented in the graph legend was facilitated relative to detection of main effects of variables represented in the x-axis. Graphs may be a preferable representational format when the desired task or analytical perspective is known in advance, but may also induce greater interpretive bias than tables, necessitating greater care in their use and design. PMID:24427145
Measuring Graph Comprehension, Critique, and Construction in Science
NASA Astrophysics Data System (ADS)
Lai, Kevin; Cabrera, Julio; Vitale, Jonathan M.; Madhok, Jacquie; Tinker, Robert; Linn, Marcia C.
2016-08-01
Interpreting and creating graphs plays a critical role in scientific practice. The K-12 Next Generation Science Standards call for students to use graphs for scientific modeling, reasoning, and communication. To measure progress on this dimension, we need valid and reliable measures of graph understanding in science. In this research, we designed items to measure graph comprehension, critique, and construction and developed scoring rubrics based on the knowledge integration (KI) framework. We administered the items to over 460 middle school students. We found that the items formed a coherent scale and had good reliability using both item response theory and classical test theory. The KI scoring rubric showed that most students had difficulty linking graphs features to science concepts, especially when asked to critique or construct graphs. In addition, students with limited access to computers as well as those who speak a language other than English at home have less integrated understanding than others. These findings point to the need to increase the integration of graphing into science instruction. The results suggest directions for further research leading to comprehensive assessments of graph understanding.
Graph Drawing Aesthetics-Created by Users, Not Algorithms.
Purchase, H C; Pilcher, C; Plimmer, B
2012-01-01
Prior empirical work on layout aesthetics for graph drawing algorithms has concentrated on the interpretation of existing graph drawings. We report on experiments which focus on the creation and layout of graph drawings: participants were asked to draw graphs based on adjacency lists, and to lay them out "nicely." Two interaction methods were used for creating the drawings: a sketch interface which allows for easy, natural hand movements, and a formal point-and-click interface similar to a typical graph editing system. We find, in common with many other studies, that removing edge crossings is the most significant aesthetic, but also discover that aligning nodes and edges to an underlying grid is important. We observe that the aesthetics favored by participants during creation of a graph drawing are often not evident in the final product and that the participants did not make a clear distinction between the processes of creation and layout. Our results suggest that graph drawing systems should integrate automatic layout with the user's manual editing process, and provide facilities to support grid-based graph creation.
Subdominant pseudoultrametric on graphs
Dovgoshei, A A; Petrov, E A
2013-08-31
Let (G,w) be a weighted graph. We find necessary and sufficient conditions under which the weight w:E(G)→R{sup +} can be extended to a pseudoultrametric on V(G), and establish a criterion for the uniqueness of such an extension. We demonstrate that (G,w) is a complete k-partite graph, for k≥2, if and only if for any weight that can be extended to a pseudoultrametric, among all such extensions one can find the least pseudoultrametric consistent with w. We give a structural characterization of graphs for which the subdominant pseudoultrametric is an ultrametric for any strictly positive weight that can be extended to a pseudoultrametric. Bibliography: 14 titles.
Chen, J.; Safro, I.
2011-01-01
Measuring the connection strength between a pair of vertices in a graph is one of the most important concerns in many graph applications. Simple measures such as edge weights may not be sufficient for capturing the effects associated with short paths of lengths greater than one. In this paper, we consider an iterative process that smooths an associated value for nearby vertices, and we present a measure of the local connection strength (called the algebraic distance; see [D. Ron, I. Safro, and A. Brandt, Multiscale Model. Simul., 9 (2011), pp. 407-423]) based on this process. The proposed measure is attractive in that the process is simple, linear, and easily parallelized. An analysis of the convergence property of the process reveals that the local neighborhoods play an important role in determining the connectivity between vertices. We demonstrate the practical effectiveness of the proposed measure through several combinatorial optimization problems on graphs and hypergraphs.
2002-04-15
path from a to (3 together with an edge (3 -+ a is called a (fully) directed cycle . An anterior path from a to f3 together with an edge (3 -+ a is...called a partially directed cycle . A directed acyclic graph (DA G) is a mixed graph in which all edges are directed, and there are no directed cycles . 3...regardless of whether a and "’f are adjacent). There are no directed cycles or pa’ltially directed cycles . 9 to Proof: follows because condition rules
1990-03-01
returns from a frequency swept microwave signal centred on the ship being measured. Each data set consists of 255 equally spaced points which represent...overlaid one over the other, or split into three windows where the hard black-lined top graph is the back chart and the thinner-lined lower graph is the...Borland’s Turbo Pascal Version 1.0 (Borland 1986) to edit and compile the main source code. Menu details, window specification, dialogue box and item
Graphing Calculator Mini Course
NASA Technical Reports Server (NTRS)
Karnawat, Sunil R.
1996-01-01
The "Graphing Calculator Mini Course" project provided a mathematically-intensive technologically-based summer enrichment workshop for teachers of American Indian students on the Turtle Mountain Indian Reservation. Eleven such teachers participated in the six-day workshop in summer of 1996 and three Sunday workshops in the academic year. The project aimed to improve science and mathematics education on the reservation by showing teachers effective ways to use high-end graphing calculators as teaching and learning tools in science and mathematics courses at all levels. In particular, the workshop concentrated on applying TI-82's user-friendly features to understand the various mathematical and scientific concepts.
Selected Social Studies Skills: 88 Reinforcement Lessons for Secondary Students.
ERIC Educational Resources Information Center
Stockhaus, Stuart, Ed.
Presented is a series of 88 lessons designed by classroom teachers to help junior high school students reinforce social studies skills. Lessons are categorized into four main skill areas: (1) using reference aids; (2) understanding tables, graphs, and cartoons; (3) developing graphic skills; and (4) evaluating information. For each skill area,…
ERIC Educational Resources Information Center
Bettis, Norman C.; Brown, Les
1976-01-01
Study suggests that the use of line graphs before sixth grade is a questionable educational practice as their use might demand skills beyond the developmental levels of most younger children. (Editor)
Graph ensemble boosting for imbalanced noisy graph stream classification.
Pan, Shirui; Wu, Jia; Zhu, Xingquan; Zhang, Chengqi
2015-05-01
Many applications involve stream data with structural dependency, graph representations, and continuously increasing volumes. For these applications, it is very common that their class distributions are imbalanced with minority (or positive) samples being only a small portion of the population, which imposes significant challenges for learning models to accurately identify minority samples. This problem is further complicated with the presence of noise, because they are similar to minority samples and any treatment for the class imbalance may falsely focus on the noise and result in deterioration of accuracy. In this paper, we propose a classification model to tackle imbalanced graph streams with noise. Our method, graph ensemble boosting, employs an ensemble-based framework to partition graph stream into chunks each containing a number of noisy graphs with imbalanced class distributions. For each individual chunk, we propose a boosting algorithm to combine discriminative subgraph pattern selection and model learning as a unified framework for graph classification. To tackle concept drifting in graph streams, an instance level weighting mechanism is used to dynamically adjust the instance weight, through which the boosting framework can emphasize on difficult graph samples. The classifiers built from different graph chunks form an ensemble for graph stream classification. Experiments on real-life imbalanced graph streams demonstrate clear benefits of our boosting design for handling imbalanced noisy graph stream.
Creating single-subject design graphs in Microsoft Excel 2007.
Dixon, Mark R; Jackson, James W; Small, Stacey L; Horner-King, Mollie J; Lik, Nicholas Mui Ker; Garcia, Yors; Rosales, Rocio
2009-01-01
Over 10 years have passed since the publication of Carr and Burkholder's (1998) technical article on how to construct single-subject graphs using Microsoft Excel. Over the course of the past decade, the Excel program has undergone a series of revisions that make the Carr and Burkholder paper somewhat difficult to follow with newer versions. The present article provides task analyses for constructing various types of commonly used single-subject design graphs in Microsoft Excel 2007. The task analyses were evaluated using a between-subjects design that compared the graphing skills of 22 behavior-analytic graduate students using Excel 2007 and either the Carr and Burkholder or newly developed task analyses. Results indicate that the new task analyses yielded more accurate and faster graph construction than the Carr and Burkholder instructions.
Using graph approach for managing connectivity in integrative landscape modelling
NASA Astrophysics Data System (ADS)
Rabotin, Michael; Fabre, Jean-Christophe; Libres, Aline; Lagacherie, Philippe; Crevoisier, David; Moussa, Roger
2013-04-01
FLUID-landr library has been developed in order i) to be used with no GIS expert skills needed (common gis formats can be read and simplified spatial management is provided), ii) to easily develop adapted rules of landscape discretization and graph creation to follow spatialized model requirements and iii) to allow model developers to manage dynamic and complex spatial topology. Graph management in OpenFLUID are shown with i) examples of hydrological modelizations on complex farmed landscapes and ii) the new implementation of Geo-MHYDAS tool based on the OpenFLUID-landr library, which allows to discretize a landscape and create graph structure for the MHYDAS model requirements.
ERIC Educational Resources Information Center
Sokol, William
In this autoinstructional packet, the student is given an experimental situation which introduces him to the process of graphing. The lesson is presented for secondary school students in chemistry. Algebra I and a Del Mod System program (indicated as SE 018 020) are suggested prerequisites for the use of this program. Behavioral objectives are…
Simmons, G.J.
1985-01-01
Given a graph G and an ordering phi of the vertices, V(G), we define a parsimonious proper coloring (PPC) of V(G) under phi to be a proper coloring of V(G) in the order phi, where a new color is introduced only when a vertex cannot be properly colored in its order with any of the colors already used.
2013-02-19
This library is used in several LLNL projects, including STAT (the Stack Trace Analysis Tool for scalable debugging) and some modules in P^nMPI (a tool MPI tool infrastructure). It can also be used standalone for creating and manipulationg graphs, but its API is primarily tuned to support these other projects
Coloring geographical threshold graphs
Bradonjic, Milan; Percus, Allon; Muller, Tobias
2008-01-01
We propose a coloring algorithm for sparse random graphs generated by the geographical threshold graph (GTG) model, a generalization of random geometric graphs (RGG). In a GTG, nodes are distributed in a Euclidean space, and edges are assigned according to a threshold function involving the distance between nodes as well as randomly chosen node weights. The motivation for analyzing this model is that many real networks (e.g., wireless networks, the Internet, etc.) need to be studied by using a 'richer' stochastic model (which in this case includes both a distance between nodes and weights on the nodes). Here, we analyze the GTG coloring algorithm together with the graph's clique number, showing formally that in spite of the differences in structure between GTG and RGG, the asymptotic behavior of the chromatic number is identical: {chi}1n 1n n / 1n n (1 + {omicron}(1)). Finally, we consider the leading corrections to this expression, again using the coloring algorithm and clique number to provide bounds on the chromatic number. We show that the gap between the lower and upper bound is within C 1n n / (1n 1n n){sup 2}, and specify the constant C.
ERIC Educational Resources Information Center
Nemirovsky, Ricardo; Tierney, Cornelia; Wright, Tracy
1998-01-01
Analyzed two children's use of a computer-based motion detector to make sense of symbolic expressions (Cartesian graphs). Found three themes: (1) tool perspectives, efforts to understand graphical responses to body motion; (2) fusion, emergent ways of talking and behaving that merge symbols and referents; and (3) graphical spaces, when changing…
ERIC Educational Resources Information Center
Donley, H. Edward; George, Elizabeth Ann
1993-01-01
Demonstrates how to construct rational, exponential, and sinusoidal functions that appear normal on one scale but exhibit interesting hidden behavior when viewed on another scale. By exploring these examples, students learn the importance of scale, window size, and resolution effects in computer and calculator graphing. (MAZ)
ERIC Educational Resources Information Center
Krueger, Tom
2010-01-01
In this article, the author shares one effective lesson idea on straight line graphs that he applied in his lower ability Y9 class. The author wanted something interesting for his class to do, something that was fun and engaging with direct feedback, and something that worked because someone else had tried it before. In a word, the author admits…
Temporal Representation in Semantic Graphs
Levandoski, J J; Abdulla, G M
2007-08-07
A wide range of knowledge discovery and analysis applications, ranging from business to biological, make use of semantic graphs when modeling relationships and concepts. Most of the semantic graphs used in these applications are assumed to be static pieces of information, meaning temporal evolution of concepts and relationships are not taken into account. Guided by the need for more advanced semantic graph queries involving temporal concepts, this paper surveys the existing work involving temporal representations in semantic graphs.
Quantum walks on quotient graphs
Krovi, Hari; Brun, Todd A.
2007-06-15
A discrete-time quantum walk on a graph {gamma} is the repeated application of a unitary evolution operator to a Hilbert space corresponding to the graph. If this unitary evolution operator has an associated group of symmetries, then for certain initial states the walk will be confined to a subspace of the original Hilbert space. Symmetries of the original graph, given by its automorphism group, can be inherited by the evolution operator. We show that a quantum walk confined to the subspace corresponding to this symmetry group can be seen as a different quantum walk on a smaller quotient graph. We give an explicit construction of the quotient graph for any subgroup H of the automorphism group and illustrate it with examples. The automorphisms of the quotient graph which are inherited from the original graph are the original automorphism group modulo the subgroup H used to construct it. The quotient graph is constructed by removing the symmetries of the subgroup H from the original graph. We then analyze the behavior of hitting times on quotient graphs. Hitting time is the average time it takes a walk to reach a given final vertex from a given initial vertex. It has been shown in earlier work [Phys. Rev. A 74, 042334 (2006)] that the hitting time for certain initial states of a quantum walks can be infinite, in contrast to classical random walks. We give a condition which determines whether the quotient graph has infinite hitting times given that they exist in the original graph. We apply this condition for the examples discussed and determine which quotient graphs have infinite hitting times. All known examples of quantum walks with hitting times which are short compared to classical random walks correspond to systems with quotient graphs much smaller than the original graph; we conjecture that the existence of a small quotient graph with finite hitting times is necessary for a walk to exhibit a quantum speedup.
Plotting and Analyzing: Graphing Calculators for Social Inquiry.
ERIC Educational Resources Information Center
Garofalo, Joe; Bennett, Clifford; Mason, Cheryl
1999-01-01
Illustrates how graphing calculators can be used to address the knowledge and skills promoted by the National Council for the Social Studies (NCSS) and other educational organizations. Focuses on plotting capability and facilitating various types of data and information analysis. (CMK)
Recursive Feature Extraction in Graphs
2014-08-14
ReFeX extracts recursive topological features from graph data. The input is a graph as a csv file and the output is a csv file containing feature values for each node in the graph. The features are based on topological counts in the neighborhoods of each nodes, as well as recursive summaries of neighbors' features.
Xuan, Junyu; Lu, Jie; Zhang, Guangquan; Luo, Xiangfeng
2015-12-01
Graph mining has been a popular research area because of its numerous application scenarios. Many unstructured and structured data can be represented as graphs, such as, documents, chemical molecular structures, and images. However, an issue in relation to current research on graphs is that they cannot adequately discover the topics hidden in graph-structured data which can be beneficial for both the unsupervised learning and supervised learning of the graphs. Although topic models have proved to be very successful in discovering latent topics, the standard topic models cannot be directly applied to graph-structured data due to the "bag-of-word" assumption. In this paper, an innovative graph topic model (GTM) is proposed to address this issue, which uses Bernoulli distributions to model the edges between nodes in a graph. It can, therefore, make the edges in a graph contribute to latent topic discovery and further improve the accuracy of the supervised and unsupervised learning of graphs. The experimental results on two different types of graph datasets show that the proposed GTM outperforms the latent Dirichlet allocation on classification by using the unveiled topics of these two models to represent graphs.
Mining and Indexing Graph Databases
ERIC Educational Resources Information Center
Yuan, Dayu
2013-01-01
Graphs are widely used to model structures and relationships of objects in various scientific and commercial fields. Chemical molecules, proteins, malware system-call dependencies and three-dimensional mechanical parts are all modeled as graphs. In this dissertation, we propose to mine and index those graph data to enable fast and scalable search.…
ERIC Educational Resources Information Center
Hopkins, Brian
2004-01-01
The interconnected world of actors and movies is a familiar, rich example for graph theory. This paper gives the history of the "Kevin Bacon Game" and makes extensive use of a Web site to analyze the underlying graph. The main content is the classroom development of the weighted average to determine the best choice of "center" for the graph. The…
ERIC Educational Resources Information Center
Skurnick, Ronald; Davi, Charles; Skurnick, Mia
2005-01-01
Since 1952, several well-known graph theorists have proven numerous results regarding Hamiltonian graphs. In fact, many elementary graph theory textbooks contain the theorems of Ore, Bondy and Chvatal, Chvatal and Erdos, Posa, and Dirac, to name a few. In this note, the authors state and prove some propositions of their own concerning Hamiltonian…
Winlaw, Manda; De Sterck, Hans; Sanders, Geoffrey
2015-10-26
In very simple terms a network can be de ned as a collection of points joined together by lines. Thus, networks can be used to represent connections between entities in a wide variety of elds including engi- neering, science, medicine, and sociology. Many large real-world networks share a surprising number of properties, leading to a strong interest in model development research and techniques for building synthetic networks have been developed, that capture these similarities and replicate real-world graphs. Modeling these real-world networks serves two purposes. First, building models that mimic the patterns and prop- erties of real networks helps to understand the implications of these patterns and helps determine which patterns are important. If we develop a generative process to synthesize real networks we can also examine which growth processes are plausible and which are not. Secondly, high-quality, large-scale network data is often not available, because of economic, legal, technological, or other obstacles [7]. Thus, there are many instances where the systems of interest cannot be represented by a single exemplar network. As one example, consider the eld of cybersecurity, where systems require testing across diverse threat scenarios and validation across diverse network structures. In these cases, where there is no single exemplar network, the systems must instead be modeled as a collection of networks in which the variation among them may be just as important as their common features. By developing processes to build synthetic models, so-called graph generators, we can build synthetic networks that capture both the essential features of a system and realistic variability. Then we can use such synthetic graphs to perform tasks such as simulations, analysis, and decision making. We can also use synthetic graphs to performance test graph analysis algorithms, including clustering algorithms and anomaly detection algorithms.
Quantitative Literacy: Working with Log Graphs
NASA Astrophysics Data System (ADS)
Shawl, S.
2013-04-01
The need for working with and understanding different types of graphs is a common occurrence in everyday life. Examples include anything having to do investments, being an educated juror in a case that involves evidence presented graphically, and understanding many aspect of our current political discourse. Within a science class graphs play a crucial role in presenting and interpreting data. In astronomy, where the range of graphed values is many orders of magnitude, log-axes must be used and understood. Experience shows that students do not understand how to read and interpret log-axes or how they differ from linear. Alters (1996), in a study of college students in an algebra-based physics class, found little understanding of log plotting. The purpose of this poster is to show the method and progression I have developed for use in my “ASTRO 101” class, with the goal being to help students better understand the H-R diagram, mass-luminosity relationship, and digital spectra.
Orthocomplemented complete lattices and graphs
NASA Astrophysics Data System (ADS)
Ollech, Astrid
1995-08-01
The problem I consider originates from Dörfler, who found a construction to assign an Orthocomplemented lattice H(G) to a graph G. By Dörfler it is known that for every finite Orthocomplemented lattice L there exists a graph G such that H(G)=L. Unfortunately, we can find more than one graph G with this property, i.e., orthocomplemented lattices which belong to different graphs can be isomorphic. I show some conditions under which two graphs have the same orthocomplemented lattice.
Spectral fluctuations of quantum graphs
Pluhař, Z.; Weidenmüller, H. A.
2014-10-15
We prove the Bohigas-Giannoni-Schmit conjecture in its most general form for completely connected simple graphs with incommensurate bond lengths. We show that for graphs that are classically mixing (i.e., graphs for which the spectrum of the classical Perron-Frobenius operator possesses a finite gap), the generating functions for all (P,Q) correlation functions for both closed and open graphs coincide (in the limit of infinite graph size) with the corresponding expressions of random-matrix theory, both for orthogonal and for unitary symmetry.
ERIC Educational Resources Information Center
Renton Vocational Inst., WA.
The teacher's guide and collection of transparency masters are designed for use in teaching adult basic education (ABE) students how to read and interpret graphs and charts. Covered in the individual lessons of the instructional unit are the reading and interpretation of charts as well as picture, line, bar, and circle graphs. Each unit contains a…
SimGraph: A Flight Simulation Data Visualization Workstation
NASA Technical Reports Server (NTRS)
Kaplan, Joseph A.; Kenney, Patrick S.
1997-01-01
Today's modern flight simulation research produces vast amounts of time sensitive data, making a qualitative analysis of the data difficult while it remains in a numerical representation. Therefore, a method of merging related data together and presenting it to the user in a more comprehensible format is necessary. Simulation Graphics (SimGraph) is an object-oriented data visualization software package that presents simulation data in animated graphical displays for easy interpretation. Data produced from a flight simulation is presented by SimGraph in several different formats, including: 3-Dimensional Views, Cockpit Control Views, Heads-Up Displays, Strip Charts, and Status Indicators. SimGraph can accommodate the addition of new graphical displays to allow the software to be customized to each user s particular environment. A new display can be developed and added to SimGraph without having to design a new application, allowing the graphics programmer to focus on the development of the graphical display. The SimGraph framework can be reused for a wide variety of visualization tasks. Although it was created for the flight simulation facilities at NASA Langley Research Center, SimGraph can be reconfigured to almost any data visualization environment. This paper describes the capabilities and operations of SimGraph.
Modified risk graph method using fuzzy rule-based approach.
Nait-Said, R; Zidani, F; Ouzraoui, N
2009-05-30
The risk graph is one of the most popular methods used to determine the safety integrity level for safety instrumented functions. However, conventional risk graph as described in the IEC 61508 standard is subjective and suffers from an interpretation problem of risk parameters. Thus, it can lead to inconsistent outcomes that may result in conservative SILs. To overcome this difficulty, a modified risk graph using fuzzy rule-based system is proposed. This novel version of risk graph uses fuzzy scales to assess risk parameters and calibration may be made by varying risk parameter values. Furthermore, the outcomes which are numerical values of risk reduction factor (the inverse of the probability of failure on demand) can be compared directly with those given by quantitative and semi-quantitative methods such as fault tree analysis (FTA), quantitative risk assessment (QRA) and layers of protection analysis (LOPA).
Alzheimer's disease: connecting findings from graph theoretical studies of brain networks.
Tijms, Betty M; Wink, Alle Meije; de Haan, Willem; van der Flier, Wiesje M; Stam, Cornelis J; Scheltens, Philip; Barkhof, Frederik
2013-08-01
The interrelationships between pathological processes and emerging clinical phenotypes in Alzheimer's disease (AD) are important yet complicated to study, because the brain is a complex network where local disruptions can have widespread effects. Recently, properties in brain networks obtained with neuroimaging techniques have been studied in AD with tools from graph theory. However, the interpretation of graph alterations remains unclear, because the definition of connectivity depends on the imaging modality used. Here we examined which graph properties have been consistently reported to be disturbed in AD studies, using a heuristically defined "graph space" to investigate which theoretical models can best explain graph alterations in AD. Findings from structural and functional graphs point to a loss of highly connected areas in AD. However, studies showed considerable variability in reported group differences of most graph properties. This suggests that brain graphs might not be isometric, which complicates the interpretation of graph measurements. We highlight confounding factors such as differences in graph construction methods and provide recommendations for future research.
2010-12-02
evaluating the function ΘP (A) for any fixed A,P is equivalent to solving the so-called Quadratic Assignment Problem ( QAP ), and thus we can employ various...tractable linear programming, spectral, and SDP relaxations of QAP [40, 11, 33]. In particular we discuss recent work [14] on exploiting group...symmetry in SDP relaxations of QAP , which is useful for approximately computing elementary convex graph invariants in many interesting cases. Finally in
ERIC Educational Resources Information Center
Syed, M. Qasim; Lovatt, Ian
2014-01-01
This paper is an addition to the series of papers on the exponential function begun by Albert Bartlett. In particular, we ask how the graph of the exponential function y = e[superscript -t/t] would appear if y were plotted versus ln t rather than the normal practice of plotting ln y versus t. In answering this question, we find a new way to…
Range charts and no-space graphs
Edwards, L.E.
1978-01-01
No-space graphs present one solution to the familiar problem: given data on the occurrence of fossil taxa in separate, well-sampled sections, determine a range chart; that is, a reasonable working hypothesis of the total range in the area in question of each taxon studied. The solution presented here treats only the relative sequence of biostratigraphic events (first and last occurrences of taxa) and does not attempt to determine an amount of spacing between events. Relative to a hypothesized sequence, observed events in any section may be in-place or out-of-place. Out-of-place events may indicate (1) the event in question reflects a taxon that did not fill its entire range (unfilled-range event), or (2) the event in question indicates a need for the revision of the hypothesized sequence. A graph of relative position only (no-space graph) can be used to facilitate the recognition of in-place and out-of-place events by presenting a visual comparison of the observations from each section with the hypothesized sequence. The geometry of the graph as constructed here is such that in-place events will lie along a line series and out-of-place events will lie above or below it. First-occurrence events below the line series and last-occurrence events above the line series indicate unfilled ranges. First-occurrence events above the line series and last-occurrence events below the line series indicate a need for the revision of the hypothesis. Knowing this, the stratigrapher considers alternative positionings of the line series as alternative range hypotheses and seeks the line series that best fits his geologic and paleontologic judgment. No-space graphs are used to revise an initial hypothesis until a final hypothesis is reached. In this final hypothesis every event is found in-place in at least one section, and all events in all sections may be interpreted to represent in-place events or unfilled-range events. No event may indicate a need for further range revision. The
Borovsky, Arielle; Elman, Jeffrey; Fernald, Anne
2012-01-01
Adults can incrementally combine information from speech with astonishing speed in order to anticipate future words. Concurrently, a growing body of work suggests that vocabulary ability is crucially related to lexical processing skills in young children. However, relatively little is known about this relationship with predictive sentence processing in children or adults. We explore this question by comparing the degree to which an upcoming sentential Theme is anticipated by a combination of information from a preceding Agent and Action. 48 children, aged of 3 to 10, and 48 college-aged adults’ eye-movements were recorded as they looked at a four-alternative forced-choice display while they heard a sentence in which the object referred to one of the pictures (e.g. The pirate hides the treasure) in the presence of an Agent-related, Action-related and Unrelated distractor image. Pictures were rotated across stimuli so that, across all versions of the study, each picture appeared in all conditions, yielding a completely balanced within-subjects design. Adults and children very quickly made use of combinatory information as soon as it became available at the action to generate anticipatory looks to the target object. Speed of anticipatory fixations did not vary with age. However, when controlling for age, individuals with higher vocabularies were faster to look to the target than those with lower vocabulary scores. Together, these results support and extend current views of incremental processing in which adults and children make use of linguistic information to continuously update their mental representation of ongoing language. PMID:22632758
Zhou, Feng; de la Torre, Fernando
2015-11-19
Graph matching (GM) is a fundamental problem in computer science, and it plays a central role to solve correspondence problems in computer vision. GM problems that incorporate pairwise constraints can be formulated as a quadratic assignment problem (QAP). Although widely used, solving the correspondence problem through GM has two main limitations: (1) the QAP is NP-hard and difficult to approximate; (2) GM algorithms do not incorporate geometric constraints between nodes that are natural in computer vision problems. To address aforementioned problems, this paper proposes factorized graph matching (FGM). FGM factorizes the large pairwise affinity matrix into smaller matrices that encode the local structure of each graph and the pairwise affinity between edges. Four are the benefits that follow from this factorization: (1) There is no need to compute the costly (in space and time) pairwise affinity matrix; (2) The factorization allows the use of a path-following optimization algorithm, that leads to improved optimization strategies and matching performance; (3) Given the factorization, it becomes straight-forward to incorporate geometric transformations (rigid and non-rigid) to the GM problem. (4) Using a matrix formulation for the GM problem and the factorization, it is easy to reveal commonalities and differences between different GM methods. The factorization also provides a clean connection with other matching algorithms such as iterative closest point; Experimental results on synthetic and real databases illustrate how FGM outperforms state-of-the-art algorithms for GM. The code is available at http://humansensing.cs.cmu.edu/fgm.
Comparison of Student Understanding of Line Graph Slope in Physics and Mathematics
ERIC Educational Resources Information Center
Planinic, Maja; Milin-Sipus, Zeljka; Katic, Helena; Susac, Ana; Ivanjek, Lana
2012-01-01
This study gives an insight into the differences between student understanding of line graph slope in the context of physics (kinematics) and mathematics. Two pairs of parallel physics and mathematics questions that involved estimation and interpretation of line graph slope were constructed and administered to 114 Croatian second year high school…
The Effects of Data and Graph Type on Concepts and Visualizations of Variability
ERIC Educational Resources Information Center
Cooper, Linda L.; Shore, Felice S.
2010-01-01
Recognizing and interpreting variability in data lies at the heart of statistical reasoning. Since graphical displays should facilitate communication about data, statistical literacy should include an understanding of how variability in data can be gleaned from a graph. This paper identifies several types of graphs that students typically…
Novice Interpretations of Visual Representations of Geosciences Data
NASA Astrophysics Data System (ADS)
Burkemper, L. K.; Arthurs, L.
2013-12-01
Past cognition research of individual's perception and comprehension of bar and line graphs are substantive enough that they have resulted in the generation of graph design principles and graph comprehension theories; however, gaps remain in our understanding of how people process visual representations of data, especially of geologic and atmospheric data. This pilot project serves to build on others' prior research and begin filling the existing gaps. The primary objectives of this pilot project include: (i) design a novel data collection protocol based on a combination of paper-based surveys, think-aloud interviews, and eye-tracking tasks to investigate student data handling skills of simple to complex visual representations of geologic and atmospheric data, (ii) demonstrate that the protocol yields results that shed light on student data handling skills, and (iii) generate preliminary findings upon which tentative but perhaps helpful recommendations on how to more effectively present these data to the non-scientist community and teach essential data handling skills. An effective protocol for the combined use of paper-based surveys, think-aloud interviews, and computer-based eye-tracking tasks for investigating cognitive processes involved in perceiving, comprehending, and interpreting visual representations of geologic and atmospheric data is instrumental to future research in this area. The outcomes of this pilot study provide the foundation upon which future more in depth and scaled up investigations can build. Furthermore, findings of this pilot project are sufficient for making, at least, tentative recommendations that can help inform (i) the design of physical attributes of visual representations of data, especially more complex representations, that may aid in improving students' data handling skills and (ii) instructional approaches that have the potential to aid students in more effectively handling visual representations of geologic and atmospheric data
Lung segmentation with graph cuts: Graph size versus performance
NASA Astrophysics Data System (ADS)
Pazokifard, Banafsheh; Sowmya, Arcot
2013-10-01
The effect of graph size on segmentation performance and speed is investigated, where segmentation is based on the graph cuts algorithm. The study is performed on lung extraction in 50 complete multi detector computed tomography (MDCT) datasets, and a fully automatic procedure. The experiments were performed on different graph sizes for both 2-D (4 and 8 neighbours) and 3-D (6 and 26 neighbours) graphs. Five slices from each segmented dataset were compared to the reference delineation provided by a radiologist. Our evaluations highlight the fact that when medical image segmentation is performed using graph cuts, increasing graph and neighbourhood connection size does not necessarily improve the segmentation performance, but also increase the running time dramatically.
Graph Theoretical Model of a Sensorimotor Connectome in Zebrafish
Stobb, Michael; Peterson, Joshua M.; Mazzag, Borbala; Gahtan, Ethan
2012-01-01
Mapping the detailed connectivity patterns (connectomes) of neural circuits is a central goal of neuroscience. The best quantitative approach to analyzing connectome data is still unclear but graph theory has been used with success. We present a graph theoretical model of the posterior lateral line sensorimotor pathway in zebrafish. The model includes 2,616 neurons and 167,114 synaptic connections. Model neurons represent known cell types in zebrafish larvae, and connections were set stochastically following rules based on biological literature. Thus, our model is a uniquely detailed computational representation of a vertebrate connectome. The connectome has low overall connection density, with 2.45% of all possible connections, a value within the physiological range. We used graph theoretical tools to compare the zebrafish connectome graph to small-world, random and structured random graphs of the same size. For each type of graph, 100 randomly generated instantiations were considered. Degree distribution (the number of connections per neuron) varied more in the zebrafish graph than in same size graphs with less biological detail. There was high local clustering and a short average path length between nodes, implying a small-world structure similar to other neural connectomes and complex networks. The graph was found not to be scale-free, in agreement with some other neural connectomes. An experimental lesion was performed that targeted three model brain neurons, including the Mauthner neuron, known to control fast escape turns. The lesion decreased the number of short paths between sensory and motor neurons analogous to the behavioral effects of the same lesion in zebrafish. This model is expandable and can be used to organize and interpret a growing database of information on the zebrafish connectome. PMID:22624008
Graph theoretical model of a sensorimotor connectome in zebrafish.
Stobb, Michael; Peterson, Joshua M; Mazzag, Borbala; Gahtan, Ethan
2012-01-01
Mapping the detailed connectivity patterns (connectomes) of neural circuits is a central goal of neuroscience. The best quantitative approach to analyzing connectome data is still unclear but graph theory has been used with success. We present a graph theoretical model of the posterior lateral line sensorimotor pathway in zebrafish. The model includes 2,616 neurons and 167,114 synaptic connections. Model neurons represent known cell types in zebrafish larvae, and connections were set stochastically following rules based on biological literature. Thus, our model is a uniquely detailed computational representation of a vertebrate connectome. The connectome has low overall connection density, with 2.45% of all possible connections, a value within the physiological range. We used graph theoretical tools to compare the zebrafish connectome graph to small-world, random and structured random graphs of the same size. For each type of graph, 100 randomly generated instantiations were considered. Degree distribution (the number of connections per neuron) varied more in the zebrafish graph than in same size graphs with less biological detail. There was high local clustering and a short average path length between nodes, implying a small-world structure similar to other neural connectomes and complex networks. The graph was found not to be scale-free, in agreement with some other neural connectomes. An experimental lesion was performed that targeted three model brain neurons, including the Mauthner neuron, known to control fast escape turns. The lesion decreased the number of short paths between sensory and motor neurons analogous to the behavioral effects of the same lesion in zebrafish. This model is expandable and can be used to organize and interpret a growing database of information on the zebrafish connectome.
Evaluation of Graph Pattern Matching Workloads in Graph Analysis Systems
Hong, Seokyong; Lee, Sangkeun; Lim, Seung-Hwan; Sukumar, Sreenivas Rangan; Vatsavai, Raju
2016-01-01
Graph analysis has emerged as a powerful method for data scientists to represent, integrate, query, and explore heterogeneous data sources. As a result, graph data management and mining became a popular area of research, and led to the development of plethora of systems in recent years. Unfortunately, the number of emerging graph analysis systems and the wide range of applications, coupled with a lack of apples-to-apples comparisons, make it difficult to understand the trade-offs between different systems and the graph operations for which they are designed. A fair comparison of these systems is a challenging task for the following reasons: multiple data models, non-standardized serialization formats, various query interfaces to users, and diverse environments they operate in. To address these key challenges, in this paper we present a new benchmark suite by extending the Lehigh University Benchmark (LUBM) to cover the most common capabilities of various graph analysis systems. We provide the design process of the benchmark, which generalizes the workflow for data scientists to conduct the desired graph analysis on different graph analysis systems. Equipped with this extended benchmark suite, we present performance comparison for nine subgraph pattern retrieval operations over six graph analysis systems, namely NetworkX, Neo4j, Jena, Titan, GraphX, and uRiKA. Through the proposed benchmark suite, this study reveals both quantitative and qualitative findings in (1) implications in loading data into each system; (2) challenges in describing graph patterns for each query interface; and (3) different sensitivity of each system to query selectivity. We envision that this study will pave the road for: (i) data scientists to select the suitable graph analysis systems, and (ii) data management system designers to advance graph analysis systems.
Automated Program Recognition by Graph Parsing
1992-07-01
programs are represented as attributed dataflow graphs and a library of clichis is encoded as an attributed graph grammar . Graph parsing is used to...recognition. Second, we investigate the expressiveness of our graph grammar formalism for capturing pro- gramming cliches. Third, we empirically and...library of cliches is encoded as an attributed graph grammar . Graph parsing is used to recognize clich6s in the code. We demonstrate that this graph
Graph Coarsening for Path Finding in Cybersecurity Graphs
Hogan, Emilie A.; Johnson, John R.; Halappanavar, Mahantesh
2013-01-01
n the pass-the-hash attack, hackers repeatedly steal password hashes and move through a computer network with the goal of reaching a computer with high level administrative privileges. In this paper we apply graph coarsening in network graphs for the purpose of detecting hackers using this attack or assessing the risk level of the network's current state. We repeatedly take graph minors, which preserve the existence of paths in the graph, and take powers of the adjacency matrix to count the paths. This allows us to detect the existence of paths as well as find paths that have high risk of being used by adversaries.
Communication Skills for the Future.
ERIC Educational Resources Information Center
LaConte, Ronald T.
1984-01-01
Information age communication skills that are being neglected include message compression, decoding and interpreting, kinesics, information synthesis, visual literacy, and rapid analysis and evaluation of message validity. Among ways to improve these skills are concentrating on transitional skills, adopting a holistic approach, increasing lateral…
1973-10-01
The theory of strongly regular graphs was introduced by Bose r7 1 in 1963, in connection with partial geometries and 2 class association schemes. One...non adjacent vertices is constant and equal to ~. We shall denote by ~(p) (reap.r(p)) the set of vertices adjacent (resp.non adjacent) to a vertex p...is the complement of .2’ if the set of vertices of ~ is the set of vertices of .2’ and if two vertices in .2’ are adjacent if and only if they were
Eigensolutions of dodecahedron graphs
NASA Astrophysics Data System (ADS)
Ghosh, Piyali; Karmakar, Somnath; Mandal, Bholanath
2014-02-01
Eigensolutions of 20-vertex cage (i.e. dodecahedron) have been determined with the use of fivefold rotational symmetry. For homo-dodecahedron the eigensolutions become analytical but for the hetero-dodecahedron having two different types of atoms ((C,N),(C,B),(B,N)) the eigensolutions are found to be factored out into five 4-degree polynomials with one corresponding to nondegenerate and other four corresponding to two degenerate eigensolutions. Eigenspectra and total π-electron energies of homo- and hetero-dodecahedron graphs have been calculated.
NASA Technical Reports Server (NTRS)
Burleigh, Scott C.
2011-01-01
Contact Graph Routing (CGR) is a dynamic routing system that computes routes through a time-varying topology of scheduled communication contacts in a network based on the DTN (Delay-Tolerant Networking) architecture. It is designed to enable dynamic selection of data transmission routes in a space network based on DTN. This dynamic responsiveness in route computation should be significantly more effective and less expensive than static routing, increasing total data return while at the same time reducing mission operations cost and risk. The basic strategy of CGR is to take advantage of the fact that, since flight mission communication operations are planned in detail, the communication routes between any pair of bundle agents in a population of nodes that have all been informed of one another's plans can be inferred from those plans rather than discovered via dialogue (which is impractical over long one-way-light-time space links). Messages that convey this planning information are used to construct contact graphs (time-varying models of network connectivity) from which CGR automatically computes efficient routes for bundles. Automatic route selection increases the flexibility and resilience of the space network, simplifying cross-support and reducing mission management costs. Note that there are no routing tables in Contact Graph Routing. The best route for a bundle destined for a given node may routinely be different from the best route for a different bundle destined for the same node, depending on bundle priority, bundle expiration time, and changes in the current lengths of transmission queues for neighboring nodes; routes must be computed individually for each bundle, from the Bundle Protocol agent's current network connectivity model for the bundle s destination node (the contact graph). Clearly this places a premium on optimizing the implementation of the route computation algorithm. The scalability of CGR to very large networks remains a research topic
Hinz, Andreas M.
2012-01-01
The appropriate mathematical model for the problem space of tower transformation tasks is the state graph representing positions of discs or balls and their moves. Graph theoretical quantities like distance, eccentricities or degrees of vertices and symmetries of graphs support the choice of problems, the selection of tasks and the analysis of performance of subjects whose solution paths can be projected onto the graph. The mathematical model is also at the base of a computerized test tool to administer various types of tower tasks. PMID:22207419
ERIC Educational Resources Information Center
Clary, Renee; Wandersee, James
2014-01-01
Renee Clary and James Wandersee implemented the Stratigraphy and Data Interpretation Project described in this article when they recognized that some students were having difficulties constructing appropriate graphics and interpreting their constructed graphics for an earlier mathematics-science project in their classrooms. They also previously…
ERIC Educational Resources Information Center
Kemper, Susan; Estill, Robert
A study investigated the immediate comprehension processes involved in the interpretation of English idiomatic expressions. Idioms such as "bury the hatchet" were presented to 48 college students in sentential contexts that either biased the subject toward a literal or a figurative interpretation or left the interpretation ambiguous. In control…
NASA Astrophysics Data System (ADS)
Follette, Katherine B.; McCarthy, D. W.
2012-01-01
We present preliminary results from a student survey designed to test whether the all-important life skill of numeracy/quantitative literacy can be fostered and improved upon in college students through the vehicle of non-major introductory courses in Astronomy. Many instructors of introductory science courses for non-majors would state that a major goal of our classes is to teach our students to distinguish between science and pseudoscience, truth and fiction, in their everyday lives. It is difficult to believe that such a skill can truly be mastered without a fair amount of mathematical sophistication in the form of arithmetic, statistical and graph reading skills that many American college students unfortunately lack when they enter our classrooms. In teaching what is frequently their "terminal science course in life” can we instill in our students the numerical skills that they need to be savvy consumers, educated citizens and discerning interpreters of the ever-present polls, studies and surveys in which our society is awash? In what may well be their final opportunity to see applied mathematics in the classroom, can we impress upon them the importance of mathematical sophistication in interpreting the statistics that they are bombarded with by the media? Our study is in its second semester, and is designed to investigate to what extent it is possible to improve important quantitative skills in college students through a single semester introductory Astronomy course.
Graph Visualization for RDF Graphs with SPARQL-EndPoints
Sukumar, Sreenivas R; Bond, Nathaniel
2014-07-11
RDF graphs are hard to visualize as triples. This software module is a web interface that connects to a SPARQL endpoint and retrieves graph data that the user can explore interactively and seamlessly. The software written in python and JavaScript has been tested to work on screens as little as the smart phones to large screens such as EVEREST.
Ensemble nonequivalence in random graphs with modular structure
NASA Astrophysics Data System (ADS)
Garlaschelli, Diego; den Hollander, Frank; Roccaverde, Andrea
2017-01-01
Breaking of equivalence between the microcanonical ensemble and the canonical ensemble, describing a large system subject to hard and soft constraints, respectively, was recently shown to occur in large random graphs. Hard constraints must be met by every graph, soft constraints must be met only on average, subject to maximal entropy. In Squartini, de Mol, den Hollander and Garlaschelli (2015 New J. Phys. 17 023052) it was shown that ensembles of random graphs are nonequivalent when the degrees of the nodes are constrained, in the sense of a non-zero limiting specific relative entropy as the number of nodes diverges. In that paper, the nodes were placed either on a single layer (uni-partite graphs) or on two layers (bi-partite graphs). In the present paper we consider an arbitrary number of intra-connected and inter-connected layers, thus allowing for modular graphs with a multi-partite, multiplex, time-varying, block-model or community structure. We give a full classification of ensemble equivalence in the sparse regime, proving that breakdown occurs as soon as the number of local constraints (i.e. the number of constrained degrees) is extensive in the number of nodes, irrespective of the layer structure. In addition, we derive an explicit formula for the specific relative entropy and provide an interpretation of this formula in terms of Poissonisation of the degrees.
Kirkpatrick, Bonnie; Reshef, Yakir; Finucane, Hilary; Jiang, Haitao; Zhu, Binhai; Karp, Richard M
2012-09-01
Pedigree graphs, or family trees, are typically constructed by an expensive process of examining genealogical records to determine which pairs of individuals are parent and child. New methods to automate this process take as input genetic data from a set of extant individuals and reconstruct ancestral individuals. There is a great need to evaluate the quality of these methods by comparing the estimated pedigree to the true pedigree. In this article, we consider two main pedigree comparison problems. The first is the pedigree isomorphism problem, for which we present a linear-time algorithm for leaf-labeled pedigrees. The second is the pedigree edit distance problem, for which we present (1) several algorithms that are fast and exact in various special cases, and (2) a general, randomized heuristic algorithm. In the negative direction, we first prove that the pedigree isomorphism problem is as hard as the general graph isomorphism problem, and that the sub-pedigree isomorphism problem is NP-hard. We then show that the pedigree edit distance problem is APX-hard in general and NP-hard on leaf-labeled pedigrees. We use simulated pedigrees to compare our edit-distance algorithms to each other as well as to a branch-and-bound algorithm that always finds an optimal solution.
Maunz, Peter Lukas Wilhelm; Sterk, Jonathan David; Lobser, Daniel; Parekh, Ojas D.; Ryan-Anderson, Ciaran
2016-01-01
In recent years, advanced network analytics have become increasingly important to na- tional security with applications ranging from cyber security to detection and disruption of ter- rorist networks. While classical computing solutions have received considerable investment, the development of quantum algorithms to address problems, such as data mining of attributed relational graphs, is a largely unexplored space. Recent theoretical work has shown that quan- tum algorithms for graph analysis can be more efficient than their classical counterparts. Here, we have implemented a trapped-ion-based two-qubit quantum information proces- sor to address these goals. Building on Sandia's microfabricated silicon surface ion traps, we have designed, realized and characterized a quantum information processor using the hyperfine qubits encoded in two 171 Yb + ions. We have implemented single qubit gates using resonant microwave radiation and have employed Gate set tomography (GST) to characterize the quan- tum process. For the first time, we were able to prove that the quantum process surpasses the fault tolerance thresholds of some quantum codes by demonstrating a diamond norm distance of less than 1 . 9 x 10 [?] 4 . We used Raman transitions in order to manipulate the trapped ions' motion and realize two-qubit gates. We characterized the implemented motion sensitive and insensitive single qubit processes and achieved a maximal process infidelity of 6 . 5 x 10 [?] 5 . We implemented the two-qubit gate proposed by Molmer and Sorensen and achieved a fidelity of more than 97 . 7%.
Quantization of gauge fields, graph polynomials and graph homology
Kreimer, Dirk; Sars, Matthias; Suijlekom, Walter D. van
2013-09-15
We review quantization of gauge fields using algebraic properties of 3-regular graphs. We derive the Feynman integrand at n loops for a non-abelian gauge theory quantized in a covariant gauge from scalar integrands for connected 3-regular graphs, obtained from the two Symanzik polynomials. The transition to the full gauge theory amplitude is obtained by the use of a third, new, graph polynomial, the corolla polynomial. This implies effectively a covariant quantization without ghosts, where all the relevant signs of the ghost sector are incorporated in a double complex furnished by the corolla polynomial–we call it cycle homology–and by graph homology. -- Highlights: •We derive gauge theory Feynman from scalar field theory with 3-valent vertices. •We clarify the role of graph homology and cycle homology. •We use parametric renormalization and the new corolla polynomial.
ERIC Educational Resources Information Center
Berg, Craig; Boote, Stacy
2017-01-01
Prior graphing research has demonstrated that clinical interviews and free-response instruments produce very different results than multiple-choice instruments, indicating potential validity problems when using multiple-choice instruments to assess graphing skills (Berg & Smith in "Science Education," 78(6), 527-554, 1994). Extending…
Blind Identification of Graph Filters
NASA Astrophysics Data System (ADS)
Segarra, Santiago; Mateos, Gonzalo; Marques, Antonio G.; Ribeiro, Alejandro
2017-03-01
Network processes are often represented as signals defined on the vertices of a graph. To untangle the latent structure of such signals, one can view them as outputs of linear graph filters modeling underlying network dynamics. This paper deals with the problem of joint identification of a graph filter and its input signal, thus broadening the scope of classical blind deconvolution of temporal and spatial signals to the less-structured graph domain. Given a graph signal $\\mathbf{y}$ modeled as the output of a graph filter, the goal is to recover the vector of filter coefficients $\\mathbf{h}$, and the input signal $\\mathbf{x}$ which is assumed to be sparse. While $\\mathbf{y}$ is a bilinear function of $\\mathbf{x}$ and $\\mathbf{h}$, the filtered graph signal is also a linear combination of the entries of the lifted rank-one, row-sparse matrix $\\mathbf{x} \\mathbf{h}^T$. The blind graph-filter identification problem can thus be tackled via rank and sparsity minimization subject to linear constraints, an inverse problem amenable to convex relaxations offering provable recovery guarantees under simplifying assumptions. Numerical tests using both synthetic and real-world networks illustrate the merits of the proposed algorithms, as well as the benefits of leveraging multiple signals to aid the blind identification task.
NASA Technical Reports Server (NTRS)
Butler, Ricky W.; Sjogren, Jon A.
1998-01-01
This paper documents the NASA Langley PVS graph theory library. The library provides fundamental definitions for graphs, subgraphs, walks, paths, subgraphs generated by walks, trees, cycles, degree, separating sets, and four notions of connectedness. Theorems provided include Ramsey's and Menger's and the equivalence of all four notions of connectedness.
Network reconstruction via graph blending
NASA Astrophysics Data System (ADS)
Estrada, Rolando
2016-05-01
Graphs estimated from empirical data are often noisy and incomplete due to the difficulty of faithfully observing all the components (nodes and edges) of the true graph. This problem is particularly acute for large networks where the number of components may far exceed available surveillance capabilities. Errors in the observed graph can render subsequent analyses invalid, so it is vital to develop robust methods that can minimize these observational errors. Errors in the observed graph may include missing and spurious components, as well fused (multiple nodes are merged into one) and split (a single node is misinterpreted as many) nodes. Traditional graph reconstruction methods are only able to identify missing or spurious components (primarily edges, and to a lesser degree nodes), so we developed a novel graph blending framework that allows us to cast the full estimation problem as a simple edge addition/deletion problem. Armed with this framework, we systematically investigate the viability of various topological graph features, such as the degree distribution or the clustering coefficients, and existing graph reconstruction methods for tackling the full estimation problem. Our experimental results suggest that incorporating any topological feature as a source of information actually hinders reconstruction accuracy. We provide a theoretical analysis of this phenomenon and suggest several avenues for improving this estimation problem.
ERIC Educational Resources Information Center
Axtell, M.; Stickles, J.
2010-01-01
The last ten years have seen an explosion of research in the zero-divisor graphs of commutative rings--by professional mathematicians "and" undergraduates. The objective is to find algebraic information within the geometry of these graphs. This topic is approachable by anyone with one or two semesters of abstract algebra. This article gives the…
Graphs as Statements of Belief.
ERIC Educational Resources Information Center
Lake, David
2002-01-01
Identifies points where beliefs are important when making decisions about how graphs are drawn. Describes a simple case of the reaction between 'bicarb soda' and orange or lemon juice and discusses how drawing a graph becomes a statement of belief. (KHR)
A Collection of Features for Semantic Graphs
Eliassi-Rad, T; Fodor, I K; Gallagher, B
2007-05-02
Semantic graphs are commonly used to represent data from one or more data sources. Such graphs extend traditional graphs by imposing types on both nodes and links. This type information defines permissible links among specified nodes and can be represented as a graph commonly referred to as an ontology or schema graph. Figure 1 depicts an ontology graph for data from National Association of Securities Dealers. Each node type and link type may also have a list of attributes. To capture the increased complexity of semantic graphs, concepts derived for standard graphs have to be extended. This document explains briefly features commonly used to characterize graphs, and their extensions to semantic graphs. This document is divided into two sections. Section 2 contains the feature descriptions for static graphs. Section 3 extends the features for semantic graphs that vary over time.
Working With Educational Interpreters.
Seal, Brenda C
2000-01-01
Increasing numbers of students who are deaf or hard of hearing are being educated in their local schools. Accommodations frequently made for these students include the provision of educational interpreting services. Educational interpreters serve to equalize the source language or source communication mode (usually spoken English) with a target language or target mode (either sign language, cued speech, or oral transliterating). Educational interpreters' expertise in sign language or cued speech will likely exceed that of speech-language pathologists, whose expertise in speech and language development and in discourse demands of the classroom will likely exceed that of the educational interpreters. This article addresses the mutual needs of speech-language pathologists and educational interpreters in providing services to their students. Guidelines supported by recent research reports and survey data collected from interpreters are offered to speech-language pathologists as ways to improve the working relationships with educational interpreters in three areas: (a) evaluating a student's communication skills, (b) establishing treatment goals and intervening to meet those goals, and
Multiple directed graph large-class multi-spectral processor
NASA Technical Reports Server (NTRS)
Casasent, David; Liu, Shiaw-Dong; Yoneyama, Hideyuki
1988-01-01
Numerical analysis techniques for the interpretation of high-resolution imaging-spectrometer data are described and demonstrated. The method proposed involves the use of (1) a hierarchical classifier with a tree structure generated automatically by a Fisher linear-discriminant-function algorithm and (2) a novel multiple-directed-graph scheme which reduces the local maxima and the number of perturbations required. Results for a 500-class test problem involving simulated imaging-spectrometer data are presented in tables and graphs; 100-percent-correct classification is achieved with an improvement factor of 5.
Path similarity skeleton graph matching.
Bai, Xiang; Latecki, Longin Jan
2008-07-01
This paper presents a novel framework to for shape recognition based on object silhouettes. The main idea is to match skeleton graphs by comparing the shortest paths between skeleton endpoints. In contrast to typical tree or graph matching methods, we completely ignore the topological graph structure. Our approach is motivated by the fact that visually similar skeleton graphs may have completely different topological structures. The proposed comparison of shortest paths between endpoints of skeleton graphs yields correct matching results in such cases. The skeletons are pruned by contour partitioning with Discrete Curve Evolution, which implies that the endpoints of skeleton branches correspond to visual parts of the objects. The experimental results demonstrate that our method is able to produce correct results in the presence of articulations, stretching, and occlusion.
Raberto, Marco; Rapallo, Fabio; Scalas, Enrico
2011-01-01
In this paper, we outline a model of graph (or network) dynamics based on two ingredients. The first ingredient is a Markov chain on the space of possible graphs. The second ingredient is a semi-Markov counting process of renewal type. The model consists in subordinating the Markov chain to the semi-Markov counting process. In simple words, this means that the chain transitions occur at random time instants called epochs. The model is quite rich and its possible connections with algebraic geometry are briefly discussed. Moreover, for the sake of simplicity, we focus on the space of undirected graphs with a fixed number of nodes. However, in an example, we present an interbank market model where it is meaningful to use directed graphs or even weighted graphs. PMID:21887245
Completeness and regularity of generalized fuzzy graphs.
Samanta, Sovan; Sarkar, Biswajit; Shin, Dongmin; Pal, Madhumangal
2016-01-01
Fuzzy graphs are the backbone of many real systems like networks, image, scheduling, etc. But, due to some restriction on edges, fuzzy graphs are limited to represent for some systems. Generalized fuzzy graphs are appropriate to avoid such restrictions. In this study generalized fuzzy graphs are introduced. In this study, matrix representation of generalized fuzzy graphs is described. Completeness and regularity are two important parameters of graph theory. Here, regular and complete generalized fuzzy graphs are introduced. Some properties of them are discussed. After that, effective regular graphs are exemplified.
Comparison and enumeration of chemical graphs.
Akutsu, Tatsuya; Nagamochi, Hiroshi
2013-01-01
Chemical compounds are usually represented as graph structured data in computers. In this review article, we overview several graph classes relevant to chemical compounds and the computational complexities of several fundamental problems for these graph classes. In particular, we consider the following problems: determining whether two chemical graphs are identical, determining whether one input chemical graph is a part of the other input chemical graph, finding a maximum common part of two input graphs, finding a reaction atom mapping, enumerating possible chemical graphs, and enumerating stereoisomers. We also discuss the relationship between the fifth problem and kernel functions for chemical compounds.
GRAPH III: a digitizing and graph plotting program
Selleck, C.B.
1986-03-01
GRAPH is an interactive program that allows the user to perform two functions. The first is to plot two dimensional graphs and the second is to digitize graphs or plots to create data files of points. The program is designed to allow the user to get results quickly and easily. It is written in RATIV (a FORTRAN preprocessor) and is currently in use at Sandia under VMS on a VAX computer and CTSS on a Cray supercomputer. The program provides graphical output through all of the Sandia Virtual Device Interface (VDI) graphics devices. 2 refs., 3 figs., 3 tabs.
Improving teaching skills: from interactive classroom to applicable knowledge.
Vujovic, Predrag
2016-03-01
Making the transition from more traditional to more interactive lecturing can be successfully achieved by applying numerous teaching techniques. To use lecture time in the most efficient way, a lecturer should first instruct students to acquire basic knowledge before coming to class. Various in-class activities then can be used to help students develop higher thinking skills and gain better understanding of the studied material. These in-class activities can take many forms (multiple-choice questions of various complexities, compare-and-contrast tasks, quantitative and problem-solving tasks, questions dealing with interpretations of tables, graphs, and charts, etc.) and should be designed to help student integrate their knowledge, to facilitate communication among students, and at the same time to allow the lecturer to closely monitor the learning process as it happens in the classroom.
Graph Laplacian Regularization for Image Denoising: Analysis in the Continuous Domain.
Pang, Jiahao; Cheung, Gene
2017-04-01
Inverse imaging problems are inherently underdetermined, and hence, it is important to employ appropriate image priors for regularization. One recent popular prior-the graph Laplacian regularizer-assumes that the target pixel patch is smooth with respect to an appropriately chosen graph. However, the mechanisms and implications of imposing the graph Laplacian regularizer on the original inverse problem are not well understood. To address this problem, in this paper, we interpret neighborhood graphs of pixel patches as discrete counterparts of Riemannian manifolds and perform analysis in the continuous domain, providing insights into several fundamental aspects of graph Laplacian regularization for image denoising. Specifically, we first show the convergence of the graph Laplacian regularizer to a continuous-domain functional, integrating a norm measured in a locally adaptive metric space. Focusing on image denoising, we derive an optimal metric space assuming non-local self-similarity of pixel patches, leading to an optimal graph Laplacian regularizer for denoising in the discrete domain. We then interpret graph Laplacian regularization as an anisotropic diffusion scheme to explain its behavior during iterations, e.g., its tendency to promote piecewise smooth signals under certain settings. To verify our analysis, an iterative image denoising algorithm is developed. Experimental results show that our algorithm performs competitively with state-of-the-art denoising methods, such as BM3D for natural images, and outperforms them significantly for piecewise smooth images.
Flying through Graphs: An Introduction to Graph Theory.
ERIC Educational Resources Information Center
McDuffie, Amy Roth
2001-01-01
Presents an activity incorporating basic terminology, concepts, and solution methods of graph theory in the context of solving problems related to air travel. Discusses prerequisite knowledge and resources and includes a teacher's guide with a student worksheet. (KHR)
NASA Astrophysics Data System (ADS)
Mailloux, B. J.; Kenna, T. C.
2008-12-01
The creation and accurate interpretation of graphs is becoming a lost art among students. The availability of numerous graphing software programs makes the act of graphing data easy but does not necessarily aide students in interpreting complex visual data. This is especially true for contour maps; which have become a critical skill in the earth sciences and everyday life. In multiple classes, we have incorporated a large-scale, hands-on, contouring exercise of temperature, salinity, and density data collected in the Hudson River Estuary. The exercise allows students to learn first-hand how to plot, analyze, and present three dimensional data. As part of a day-long sampling expedition aboard an 80' research vessel, students deploy a water profiling instrument (Seabird CTD). Data are collected along a transect between the Verrazano and George Washington Bridges. The data are then processed and binned at 0.5 meter intervals. The processed data is then used during a later laboratory period for the contouring exercise. In class, students work in groups of 2 to 4 people and are provided with the data, a set of contouring instructions, a piece of large (3' x 3') graph paper, a ruler, and a set of colored markers. We then let the groups work together to determine the details of the graphs. Important steps along the way are talking to the students about X and Y scales, interpolation, and choices of contour intervals and colors. Frustration and bottlenecks are common at the beginning when students are unsure how to even begin with the raw data. At some point during the exercise, students start to understand the contour concept and each group usually produces a finished contour map in an hour or so. Interestingly, the groups take pride in the coloring portion of the contouring as it indicates successful interpretation of the data. The exercise concludes with each group presenting and discussing their contour plot. In almost every case, the hands-on graphing has improved the
Multigraph: Reusable Interactive Data Graphs
NASA Astrophysics Data System (ADS)
Phillips, M. B.
2010-12-01
There are surprisingly few good software tools available for presenting time series data on the internet. The most common practice is to use a desktop program such as Excel or Matlab to save a graph as an image which can be included in a web page like any other image. This disconnects the graph from the data in a way that makes updating a graph with new data a cumbersome manual process, and it limits the user to one particular view of the data. The Multigraph project defines an XML format for describing interactive data graphs, and software tools for creating and rendering those graphs in web pages and other internet connected applications. Viewing a Multigraph graph is extremely simple and intuitive, and requires no instructions; the user can pan and zoom by clicking and dragging, in a familiar "Google Maps" kind of way. Creating a new graph for inclusion in a web page involves writing a simple XML configuration file. Multigraph can read data in a variety of formats, and can display data from a web service, allowing users to "surf" through large data sets, downloading only those the parts of the data that are needed for display. The Multigraph XML format, or "MUGL" for short, provides a concise description of the visual properties of a graph, such as axes, plot styles, data sources, labels, etc, as well as interactivity properties such as how and whether the user can pan or zoom along each axis. Multigraph reads a file in this format, draws the described graph, and allows the user to interact with it. Multigraph software currently includes a Flash application for embedding graphs in web pages, a Flex component for embedding graphs in larger Flex/Flash applications, and a plugin for creating graphs in the WordPress content management system. Plans for the future include a Java version for desktop viewing and editing, a command line version for batch and server side rendering, and possibly Android and iPhone versions. Multigraph is currently in use on several web
DNA Rearrangements through Spatial Graphs
NASA Astrophysics Data System (ADS)
Jonoska, Nataša; Saito, Masahico
The paper is a short overview of a recent model of homologous DNA recombination events guided by RNA templates that have been observed in certain species of ciliates. This model uses spatial graphs to describe DNA rearrangements and show how gene recombination can be modeled as topological braiding of the DNA. We show that a graph structure, which we refer to as an assembly graph, containing only 1- and 4-valent rigid vertices can provide a physical representation of the DNA at the time of recombination. With this representation, 4-valent vertices correspond to the alignment of the recombination sites, and we model the actual recombination event as smoothing of these vertices.
Interpreting functions of one-dimensional kinematics
NASA Astrophysics Data System (ADS)
Canty, Reality S.
The present work examined several factors related to interpreting graphical representations of motion concepts. Since the seminal work of Larkin and Simon (1987), cognitive research has investigated informational equivalence and computational efficiency by contrasting performance across different representations systems such as line versus bar graph (Ali & Peebles, 2012; Shah & Freedman, 2009; Zacks & Tversky, 1999), table versus graph (Speier, 2006; Vessey, 1991) or table versus map (Smelcer & Carmel, 1997). Physics education research has focused on difficulties related to interpreting motion concepts in graphs, accounting for them in terms of misconceptions. Kinematics, the branch of physics concerned with the motion of objects, makes an interesting study of informational equivalence and computational efficiency because its three primary representations -- position-time, velocity-time, and acceleration-time graphs -- can reflect the same information in the same representational system which provides a different type of contrast than has usually been used in this area of cognitive research. In the present work, four experiments were used to test several hypotheses concerned with whether information about the motion of objects can be directly read-off the graph or whether it needed additional processing beyond what was directly visible; Palmer (1987) referred to this as the derivational structure of representations. The main findings across the four experiments were that (a) graph type was not a reliable factor of graph interpretation difficulty, (b) derivational structure was useful for analyzing tasks but there was no evidence supporting it as a process account, (c) graph-based judgment is susceptible to visual features in the graph that trigger powerful spatial-conceptual correspondences particularly height (e.g., higher means more, lower means less), direction of slope (e.g., zero, positive, negative), and curvature (e.g., increasing rate of change, decreasing
Edge compression techniques for visualization of dense directed graphs.
Dwyer, Tim; Henry Riche, Nathalie; Marriott, Kim; Mears, Christopher
2013-12-01
We explore the effectiveness of visualizing dense directed graphs by replacing individual edges with edges connected to 'modules'-or groups of nodes-such that the new edges imply aggregate connectivity. We only consider techniques that offer a lossless compression: that is, where the entire graph can still be read from the compressed version. The techniques considered are: a simple grouping of nodes with identical neighbor sets; Modular Decomposition which permits internal structure in modules and allows them to be nested; and Power Graph Analysis which further allows edges to cross module boundaries. These techniques all have the same goal--to compress the set of edges that need to be rendered to fully convey connectivity--but each successive relaxation of the module definition permits fewer edges to be drawn in the rendered graph. Each successive technique also, we hypothesize, requires a higher degree of mental effort to interpret. We test this hypothetical trade-off with two studies involving human participants. For Power Graph Analysis we propose a novel optimal technique based on constraint programming. This enables us to explore the parameter space for the technique more precisely than could be achieved with a heuristic. Although applicable to many domains, we are motivated by--and discuss in particular--the application to software dependency analysis.
Multibody graph transformations and analysis
2013-01-01
This two-part paper uses graph transformation methods to develop methods for partitioning, aggregating, and constraint embedding for multibody systems. This first part focuses on tree-topology systems and reviews the key notion of spatial kernel operator (SKO) models for such systems. It develops systematic and rigorous techniques for partitioning SKO models in terms of the SKO models of the component subsystems based on the path-induced property of the component subgraphs. It shows that the sparsity structure of key matrix operators and the mass matrix for the multibody system can be described using partitioning transformations. Subsequently, the notions of node contractions and subgraph aggregation and their role in coarsening graphs are discussed. It is shown that the tree property of a graph is preserved after subgraph aggregation if and only if the subgraph satisfies an aggregation condition. These graph theory ideas are used to develop SKO models for the aggregated tree multibody systems. PMID:24288438
Graph anomalies in cyber communications
Vander Wiel, Scott A; Storlie, Curtis B; Sandine, Gary; Hagberg, Aric A; Fisk, Michael
2011-01-11
Enterprises monitor cyber traffic for viruses, intruders and stolen information. Detection methods look for known signatures of malicious traffic or search for anomalies with respect to a nominal reference model. Traditional anomaly detection focuses on aggregate traffic at central nodes or on user-level monitoring. More recently, however, traffic is being viewed more holistically as a dynamic communication graph. Attention to the graph nature of the traffic has expanded the types of anomalies that are being sought. We give an overview of several cyber data streams collected at Los Alamos National Laboratory and discuss current work in modeling the graph dynamics of traffic over the network. We consider global properties and local properties within the communication graph. A method for monitoring relative entropy on multiple correlated properties is discussed in detail.
Constructing Dense Graphs with Unique Hamiltonian Cycles
ERIC Educational Resources Information Center
Lynch, Mark A. M.
2012-01-01
It is not difficult to construct dense graphs containing Hamiltonian cycles, but it is difficult to generate dense graphs that are guaranteed to contain a unique Hamiltonian cycle. This article presents an algorithm for generating arbitrarily large simple graphs containing "unique" Hamiltonian cycles. These graphs can be turned into dense graphs…
CUDA Enabled Graph Subset Examiner
Johnston, Jeremy T.
2016-12-22
Finding Godsil-McKay switching sets in graphs is one way to demonstrate that a specific graph is not determined by its spectrum--the eigenvalues of its adjacency matrix. An important area of active research in pure mathematics is determining which graphs are determined by their spectra, i.e. when the spectrum of the adjacency matrix uniquely determines the underlying graph. We are interested in exploring the spectra of graphs in the Johnson scheme and specifically seek to determine which of these graphs are determined by their spectra. Given a graph G, a Godsil-McKay switching set is an induced subgraph H on 2k vertices with the following properties: I) H is regular, ii) every vertex in G/H is adjacent to either 0, k, or 2k vertices of H, and iii) at least one vertex in G/H is adjacent to k vertices in H. The software package examines each subset of a user specified size to determine whether or not it satisfies those 3 conditions. The software makes use of the massive parallel processing power of CUDA enabled GPUs. It also exploits the vertex transitivity of graphs in the Johnson scheme by reasoning that if G has a Godsil-McKay switching set, then it has a switching set which includes vertex 1. While the code (in its current state) is tuned to this specific problem, the method of examining each induced subgraph of G can be easily re-written to check for any user specified conditions on the subgraphs and can therefore be used much more broadly.
ERIC Educational Resources Information Center
DeHaan, Frank, Ed.
1977-01-01
Describes an interpretative experiment involving the application of symmetry and temperature-dependent proton and fluorine nmr spectroscopy to the solution of structural and kinetic problems in coordination chemistry. (MLH)
ERIC Educational Resources Information Center
Weymouth, Patricia P.
1986-01-01
Describes an activity which introduces students to the nature and challenges of paleoanthropology. In the exercise, students identify diagrammed bones and make interpretations about the creature. Presents questions and tasks employed in the lesson. (ML)
Chromatic polynomials of random graphs
NASA Astrophysics Data System (ADS)
Van Bussel, Frank; Ehrlich, Christoph; Fliegner, Denny; Stolzenberg, Sebastian; Timme, Marc
2010-04-01
Chromatic polynomials and related graph invariants are central objects in both graph theory and statistical physics. Computational difficulties, however, have so far restricted studies of such polynomials to graphs that were either very small, very sparse or highly structured. Recent algorithmic advances (Timme et al 2009 New J. Phys. 11 023001) now make it possible to compute chromatic polynomials for moderately sized graphs of arbitrary structure and number of edges. Here we present chromatic polynomials of ensembles of random graphs with up to 30 vertices, over the entire range of edge density. We specifically focus on the locations of the zeros of the polynomial in the complex plane. The results indicate that the chromatic zeros of random graphs have a very consistent layout. In particular, the crossing point, the point at which the chromatic zeros with non-zero imaginary part approach the real axis, scales linearly with the average degree over most of the density range. While the scaling laws obtained are purely empirical, if they continue to hold in general there are significant implications: the crossing points of chromatic zeros in the thermodynamic limit separate systems with zero ground state entropy from systems with positive ground state entropy, the latter an exception to the third law of thermodynamics.
Khovanov homology of graph-links
Nikonov, Igor M
2012-08-31
Graph-links arise as the intersection graphs of turning chord diagrams of links. Speaking informally, graph-links provide a combinatorial description of links up to mutations. Many link invariants can be reformulated in the language of graph-links. Khovanov homology, a well-known and useful knot invariant, is defined for graph-links in this paper (in the case of the ground field of characteristic two). Bibliography: 14 titles.
Component evolution in general random intersection graphs
Bradonjic, Milan; Hagberg, Aric; Hengartner, Nick; Percus, Allon G
2010-01-01
We analyze component evolution in general random intersection graphs (RIGs) and give conditions on existence and uniqueness of the giant component. Our techniques generalize the existing methods for analysis on component evolution in RIGs. That is, we analyze survival and extinction properties of a dependent, inhomogeneous Galton-Watson branching process on general RIGs. Our analysis relies on bounding the branching processes and inherits the fundamental concepts from the study on component evolution in Erdos-Renyi graphs. The main challenge becomes from the underlying structure of RIGs, when the number of offsprings follows a binomial distribution with a different number of nodes and different rate at each step during the evolution. RIGs can be interpreted as a model for large randomly formed non-metric data sets. Besides the mathematical analysis on component evolution, which we provide in this work, we perceive RIGs as an important random structure which has already found applications in social networks, epidemic networks, blog readership, or wireless sensor networks.
Discovering genetic ancestry using spectral graph theory.
Lee, Ann B; Luca, Diana; Klei, Lambertus; Devlin, Bernie; Roeder, Kathryn
2010-01-01
As one approach to uncovering the genetic underpinnings of complex disease, individuals are measured at a large number of genetic variants (usually SNPs) across the genome and these SNP genotypes are assessed for association with disease status. We propose a new statistical method called Spectral-GEM for the analysis of genome-wide association studies; the goal of Spectral-GEM is to quantify the ancestry of the sample from such genotypic data. Ignoring structure due to differential ancestry can lead to an excess of spurious findings and reduce power. Ancestry is commonly estimated using the eigenvectors derived from principal component analysis (PCA). To develop an alternative to PCA we draw on connections between multidimensional scaling and spectral graph theory. Our approach, based on a spectral embedding derived from the normalized Laplacian of a graph, can produce more meaningful delineation of ancestry than by using PCA. Often the results from Spectral-GEM are straightforward to interpret and therefore useful in association analysis. We illustrate the new algorithm with an analysis of the POPRES data [Nelson et al., 2008].
Principal Graph and Structure Learning Based on Reversed Graph Embedding.
Mao, Qi; Wang, Li; Tsang, Ivor; Sun, Yijun
2016-12-05
Many scientific datasets are of high dimension, and the analysis usually requires retaining the most important structures of data. Principal curve is a widely used approach for this purpose. However, many existing methods work only for data with structures that are mathematically formulated by curves, which is quite restrictive for real applications. A few methods can overcome the above problem, but they either require complicated human-made rules for a specific task with lack of adaption flexibility to different tasks, or cannot obtain explicit structures of data. To address these issues, we develop a novel principal graph and structure learning framework that captures the local information of the underlying graph structure based on reversed graph embedding. As showcases, models that can learn a spanning tree or a weighted undirected `1 graph are proposed, and a new learning algorithm is developed that learns a set of principal points and a graph structure from data, simultaneously. The new algorithm is simple with guaranteed convergence. We then extend the proposed framework to deal with large-scale data. Experimental results on various synthetic and six real world datasets show that the proposed method compares favorably with baselines and can uncover the underlying structure correctly.
GraphMeta: Managing HPC Rich Metadata in Graphs
Dai, Dong; Chen, Yong; Carns, Philip; Jenkins, John; Zhang, Wei; Ross, Robert
2016-01-01
High-performance computing (HPC) systems face increasingly critical metadata management challenges, especially in the approaching exascale era. These challenges arise not only from exploding metadata volumes, but also from increasingly diverse metadata, which contains data provenance and arbitrary user-defined attributes in addition to traditional POSIX metadata. This ‘rich’ metadata is becoming critical to supporting advanced data management functionality such as data auditing and validation. In our prior work, we identified a graph-based model as a promising solution to uniformly manage HPC rich metadata due to its flexibility and generality. However, at the same time, graph-based HPC rich metadata anagement also introduces significant challenges to the underlying infrastructure. In this study, we first identify the challenges on the underlying infrastructure to support scalable, high-performance rich metadata management. Based on that, we introduce GraphMeta, a graphbased engine designed for this use case. It achieves performance scalability by introducing a new graph partitioning algorithm and a write-optimal storage engine. We evaluate GraphMeta under both synthetic and real HPC metadata workloads, compare it with other approaches, and demonstrate its advantages in terms of efficiency and usability for rich metadata management in HPC systems.
Private Graphs - Access Rights on Graphs for Seamless Navigation
NASA Astrophysics Data System (ADS)
Dorner, W.; Hau, F.; Pagany, R.
2016-06-01
After the success of GNSS (Global Navigational Satellite Systems) and navigation services for public streets, indoor seems to be the next big development in navigational services, relying on RTLS - Real Time Locating Services (e.g. WIFI) and allowing seamless navigation. In contrast to navigation and routing services on public streets, seamless navigation will cause an additional challenge: how to make routing data accessible to defined users or restrict access rights for defined areas or only to parts of the graph to a defined user group? The paper will present case studies and data from literature, where seamless and especially indoor navigation solutions are presented (hospitals, industrial complexes, building sites), but the problem of restricted access rights was only touched from a real world, but not a technical perspective. The analysis of case studies will show, that the objective of navigation and the different target groups for navigation solutions will demand well defined access rights and require solutions, how to make only parts of a graph to a user or application available to solve a navigational task. The paper will therefore introduce the concept of private graphs, which is defined as a graph for navigational purposes covering the street, road or floor network of an area behind a public street and suggest different approaches how to make graph data for navigational purposes available considering access rights and data protection, privacy and security issues as well.
Digital video, learning styles, and student understanding of kinematics graphs
NASA Astrophysics Data System (ADS)
Hein, Teresa Lee
1997-12-01
Student ability to analyze and interpret motion graphs following laboratory instruction that utilized interactive digital video as well as traditional instructional techniques was investigated. Research presented suggested that digital video tools serve to motivate students and may be an effective mechanism to enhance student understanding of motion concepts. Two laboratory exercises involving motion concepts were developed for this study. Students were divided into two instructional groups. The treatment group used digital video techniques and the control group used traditional techniques to perform the laboratory exercises. Student understanding of motion concepts were assessed, in part, using the Test of Understanding Graphs-Kinematics. Other assessment measures included student responses to a set of written graphical analysis questions and two post-lab activities. Possible relationships between individual learning style preferences and student understanding of motion concepts were also addressed. Learning style preferences were assessed using the Productivity Environmental Preference Survey prior to the instructional treatments. Students were asked to comment in writing about their learning styles before and after they were given the learning style assessment. Student comments revealed that the results they received from Productivity Environmental Preference Survey accurately reflected their learning styles. Results presented in this study showed that no significant relationship exists between students' learning style preferences and their ability to interpret motion graphs as measured by scores on the Test of Understanding Graphs-Kinematics. In addition, the results showed no significant difference between instructional treatment and mean scores on the Test of Understanding Graphs-Kinematics. Analysis of writing activities revealed that students in the treatment group responded more effectively than students in the control group to graphical interpretation
ERIC Educational Resources Information Center
Decatur Public Schools District 61, IL.
Defining listening as the active and conscious process of hearing, recognizing, and interpreting or comprehending language, this guide provides numerous activities to promote the listening skills of primary and intermediate grade students. Specifically, the activities described seek to develop (1) the ability of young students to listen…
Sharing Teaching Ideas: Graphing Families of Curves Using Transformations of Reference Graphs
ERIC Educational Resources Information Center
Kukla, David
2007-01-01
This article provides for a fast extremely accurate approach to graphing functions that is based on learning function reference graphs and then applying algebraic transformations to these reference graphs.
The Nature of Employability Skills: Empirical Evidence from Singapore
ERIC Educational Resources Information Center
Sung, Johnny; Ng, Michael Chi Man; Loke, Fiona; Ramos, Catherine
2013-01-01
This paper concerns the changing nature of employability skills, moving from the original life skills or basic skills concepts to the increasingly work-oriented interpretation. The early concept of employability skills linked employability skills to job readiness and holding down employment. However, the work-oriented focus is increasingly linking…
Graph classification by means of Lipschitz embedding.
Riesen, Kaspar; Bunke, Horst
2009-12-01
In pattern recognition and related fields, graph-based representations offer a versatile alternative to the widely used feature vectors. Therefore, an emerging trend of representing objects by graphs can be observed. This trend is intensified by the development of novel approaches in graph-based machine learning, such as graph kernels or graph-embedding techniques. These procedures overcome a major drawback of graphs, which consists of a serious lack of algorithms for classification. This paper is inspired by the idea of representing graphs through dissimilarities and extends our previous work to the more general setting of Lipschitz embeddings. In an experimental evaluation, we empirically confirm that classifiers that rely on the original graph distances can be outperformed by a classification system using the Lipschitz embedded graphs.
Design Document. EKG Interpretation Program.
ERIC Educational Resources Information Center
Webb, Sandra M.
This teaching plan is designed to assist nursing instructors assigned to advanced medical surgical nursing courses in acquainting students with the basic skills needed to perform electrocardiographic (ECG or EKG) interpretations. The first part of the teaching plan contains a statement of purpose; audience recommendations; a flow chart detailing…
ERIC Educational Resources Information Center
Munsart, Craig A.
1993-01-01
Presents an activity that allows students to experience the type of discovery process that paleontologists necessarily followed during the early dinosaur explorations. Students are read parts of a story taken from the "American Journal of Science" and interpret the evidence leading to the discovery of Triceratops and Stegosaurus. (PR)
ERIC Educational Resources Information Center
Kothe, Elsa Lenz; Berard, Marie-France
2013-01-01
Utilizing a/r/tographic methodology to interrogate interpretive acts in museums, multiple areas of inquiry are raised in this paper, including: which knowledge is assigned the greatest value when preparing a gallery talk; what lies outside of disciplinary knowledge; how invitations to participate invite and disinvite in the same gesture; and what…
ERIC Educational Resources Information Center
Pankhurst, Anne
1994-01-01
This paper examines some of the problems associated with interpreting metonymy, a figure of speech in which an attribute or commonly associated feature is used to name or designate something. After defining metonymy and outlining the principles of metonymy, the paper explains the differences between metonymy, synecdoche, and metaphor. It is…
Algebraic connectivity and graph robustness.
Feddema, John Todd; Byrne, Raymond Harry; Abdallah, Chaouki T.
2009-07-01
Recent papers have used Fiedler's definition of algebraic connectivity to show that network robustness, as measured by node-connectivity and edge-connectivity, can be increased by increasing the algebraic connectivity of the network. By the definition of algebraic connectivity, the second smallest eigenvalue of the graph Laplacian is a lower bound on the node-connectivity. In this paper we show that for circular random lattice graphs and mesh graphs algebraic connectivity is a conservative lower bound, and that increases in algebraic connectivity actually correspond to a decrease in node-connectivity. This means that the networks are actually less robust with respect to node-connectivity as the algebraic connectivity increases. However, an increase in algebraic connectivity seems to correlate well with a decrease in the characteristic path length of these networks - which would result in quicker communication through the network. Applications of these results are then discussed for perimeter security.
Graph Analytics for Signature Discovery
Hogan, Emilie A.; Johnson, John R.; Halappanavar, Mahantesh; Lo, Chaomei
2013-06-01
Within large amounts of seemingly unstructured data it can be diffcult to find signatures of events. In our work we transform unstructured data into a graph representation. By doing this we expose underlying structure in the data and can take advantage of existing graph analytics capabilities, as well as develop new capabilities. Currently we focus on applications in cybersecurity and communication domains. Within cybersecurity we aim to find signatures for perpetrators using the pass-the-hash attack, and in communications we look for emails or phone calls going up or down a chain of command. In both of these areas, and in many others, the signature we look for is a path with certain temporal properties. In this paper we discuss our methodology for finding these temporal paths within large graphs.
Graph modeling systems and methods
Neergaard, Mike
2015-10-13
An apparatus and a method for vulnerability and reliability modeling are provided. The method generally includes constructing a graph model of a physical network using a computer, the graph model including a plurality of terminating vertices to represent nodes in the physical network, a plurality of edges to represent transmission paths in the physical network, and a non-terminating vertex to represent a non-nodal vulnerability along a transmission path in the physical network. The method additionally includes evaluating the vulnerability and reliability of the physical network using the constructed graph model, wherein the vulnerability and reliability evaluation includes a determination of whether each terminating and non-terminating vertex represents a critical point of failure. The method can be utilized to evaluate wide variety of networks, including power grid infrastructures, communication network topologies, and fluid distribution systems.
Sequential visibility-graph motifs
NASA Astrophysics Data System (ADS)
Iacovacci, Jacopo; Lacasa, Lucas
2016-04-01
Visibility algorithms transform time series into graphs and encode dynamical information in their topology, paving the way for graph-theoretical time series analysis as well as building a bridge between nonlinear dynamics and network science. In this work we introduce and study the concept of sequential visibility-graph motifs, smaller substructures of n consecutive nodes that appear with characteristic frequencies. We develop a theory to compute in an exact way the motif profiles associated with general classes of deterministic and stochastic dynamics. We find that this simple property is indeed a highly informative and computationally efficient feature capable of distinguishing among different dynamics and robust against noise contamination. We finally confirm that it can be used in practice to perform unsupervised learning, by extracting motif profiles from experimental heart-rate series and being able, accordingly, to disentangle meditative from other relaxation states. Applications of this general theory include the automatic classification and description of physical, biological, and financial time series.
NASA Astrophysics Data System (ADS)
Algor, Ilan
1988-03-01
The problem concerns the minimum time in which a number of messages can be transmitted through a communication network in which each node can transmit to many other nodes simultaneously but can receive only one message at a time. In the undirected version of the problem, the graphs, G, representing the messages are finite, undirected and simple; the messages transmitted in unit time form a subgraph which is a star. The star aboricity, st(G) of a graph G is the minimum number of star forests whose union covers all edges of G. A maximum value is derived for the star aboricity of any d-regular graph G, and is proved through probabilistic arguments.
Optimal preparation of graph states
Cabello, Adan; Lopez-Tarrida, Antonio J.; Danielsen, Lars Eirik; Portillo, Jose R.
2011-04-15
We show how to prepare any graph state of up to 12 qubits with (a) the minimum number of controlled-Z gates and (b) the minimum preparation depth. We assume only one-qubit and controlled-Z gates. The method exploits the fact that any graph state belongs to an equivalence class under local Clifford operations. We extend up to 12 qubits the classification of graph states according to their entanglement properties, and identify each class using only a reduced set of invariants. For any state, we provide a circuit with both properties (a) and (b), if it does exist, or, if it does not, one circuit with property (a) and one with property (b), including the explicit one-qubit gates needed.
Rosmanis, Ansis
2011-02-15
I introduce a continuous-time quantum walk on graphs called the quantum snake walk, the basis states of which are fixed-length paths (snakes) in the underlying graph. First, I analyze the quantum snake walk on the line, and I show that, even though most states stay localized throughout the evolution, there are specific states that most likely move on the line as wave packets with momentum inversely proportional to the length of the snake. Next, I discuss how an algorithm based on the quantum snake walk might potentially be able to solve an extended version of the glued trees problem, which asks to find a path connecting both roots of the glued trees graph. To the best of my knowledge, no efficient quantum algorithm solving this problem is known yet.
Interacting particle systems on graphs
NASA Astrophysics Data System (ADS)
Sood, Vishal
In this dissertation, the dynamics of socially or biologically interacting populations are investigated. The individual members of the population are treated as particles that interact via links on a social or biological network represented as a graph. The effect of the structure of the graph on the properties of the interacting particle system is studied using statistical physics techniques. In the first chapter, the central concepts of graph theory and social and biological networks are presented. Next, interacting particle systems that are drawn from physics, mathematics and biology are discussed in the second chapter. In the third chapter, the random walk on a graph is studied. The mean time for a random walk to traverse between two arbitrary sites of a random graph is evaluated. Using an effective medium approximation it is found that the mean first-passage time between pairs of sites, as well as all moments of this first-passage time, are insensitive to the density of links in the graph. The inverse of the mean-first passage time varies non-monotonically with the density of links near the percolation transition of the random graph. Much of the behavior can be understood by simple heuristic arguments. Evolutionary dynamics, by which mutants overspread an otherwise uniform population on heterogeneous graphs, are studied in the fourth chapter. Such a process underlies' epidemic propagation, emergence of fads, social cooperation or invasion of an ecological niche by a new species. The first part of this chapter is devoted to neutral dynamics, in which the mutant genotype does not have a selective advantage over the resident genotype. The time to extinction of one of the two genotypes is derived. In the second part of this chapter, selective advantage or fitness is introduced such that the mutant genotype has a higher birth rate or a lower death rate. This selective advantage leads to a dynamical competition in which selection dominates for large populations
Synchronizability of random rectangular graphs
Estrada, Ernesto Chen, Guanrong
2015-08-15
Random rectangular graphs (RRGs) represent a generalization of the random geometric graphs in which the nodes are embedded into hyperrectangles instead of on hypercubes. The synchronizability of RRG model is studied. Both upper and lower bounds of the eigenratio of the network Laplacian matrix are determined analytically. It is proven that as the rectangular network is more elongated, the network becomes harder to synchronize. The synchronization processing behavior of a RRG network of chaotic Lorenz system nodes is numerically investigated, showing complete consistence with the theoretical results.
ERIC Educational Resources Information Center
Katz, Irvin R.; Xi, Xiaoming; Kim, Hyun-Joo; Cheng, Peter C. H.
2004-01-01
This research applied a cognitive model to identify item features that lead to irrelevant variance on the Test of Spoken English[TM] (TSE[R]). The TSE is an assessment of English oral proficiency and includes an item that elicits a description of a statistical graph. This item type sometimes appears to tap graph-reading skills--an irrelevant…
Boosting for multi-graph classification.
Wu, Jia; Pan, Shirui; Zhu, Xingquan; Cai, Zhihua
2015-03-01
In this paper, we formulate a novel graph-based learning problem, multi-graph classification (MGC), which aims to learn a classifier from a set of labeled bags each containing a number of graphs inside the bag. A bag is labeled positive, if at least one graph in the bag is positive, and negative otherwise. Such a multi-graph representation can be used for many real-world applications, such as webpage classification, where a webpage can be regarded as a bag with texts and images inside the webpage being represented as graphs. This problem is a generalization of multi-instance learning (MIL) but with vital differences, mainly because instances in MIL share a common feature space whereas no feature is available to represent graphs in a multi-graph bag. To solve the problem, we propose a boosting based multi-graph classification framework (bMGC). Given a set of labeled multi-graph bags, bMGC employs dynamic weight adjustment at both bag- and graph-levels to select one subgraph in each iteration as a weak classifier. In each iteration, bag and graph weights are adjusted such that an incorrectly classified bag will receive a higher weight because its predicted bag label conflicts to the genuine label, whereas an incorrectly classified graph will receive a lower weight value if the graph is in a positive bag (or a higher weight if the graph is in a negative bag). Accordingly, bMGC is able to differentiate graphs in positive and negative bags to derive effective classifiers to form a boosting model for MGC. Experiments and comparisons on real-world multi-graph learning tasks demonstrate the algorithm performance.
Approximate Graph Edit Distance in Quadratic Time.
Riesen, Kaspar; Ferrer, Miquel; Bunke, Horst
2015-09-14
Graph edit distance is one of the most flexible and general graph matching models available. The major drawback of graph edit distance, however, is its computational complexity that restricts its applicability to graphs of rather small size. Recently the authors of the present paper introduced a general approximation framework for the graph edit distance problem. The basic idea of this specific algorithm is to first compute an optimal assignment of independent local graph structures (including substitutions, deletions, and insertions of nodes and edges). This optimal assignment is complete and consistent with respect to the involved nodes of both graphs and can thus be used to instantly derive an admissible (yet suboptimal) solution for the original graph edit distance problem in O(n3) time. For large scale graphs or graph sets, however, the cubic time complexity may still be too high. Therefore, we propose to use suboptimal algorithms with quadratic rather than cubic time for solving the basic assignment problem. In particular, the present paper introduces five different greedy assignment algorithms in the context of graph edit distance approximation. In an experimental evaluation we show that these methods have great potential for further speeding up the computation of graph edit distance while the approximated distances remain sufficiently accurate for graph based pattern classification.
Using an algorithm to easily interpret basic cardiac rhythms.
Atwood, Denise
2005-11-01
MANY NURSES STRUGGLE with identifying electrocardiogram (ECG) rhythms, but rapidly interpreting primary ECG rhythms is an essential skill that every nurse should master. THIS ARTICLE PROVIDES an algorithm that nurses can use to easily interpret basic ECG rhythms.
On geometrical interpretation of the p-adic Maslov index
NASA Astrophysics Data System (ADS)
Zelenov, E. I.
1994-01-01
A set of selfdual lattices Λ in a two-dimensional p-adic symplectic space MediaObjects/220_2005_BF02099983_f2.jpg is provided by an integer valued metric d. A realization of the metric space (Λ, d) as a graph Γ is suggested and this graph has been linked to the Bruhat-Tits tree. An action of symplectic group MediaObjects/220_2005_BF02099983_f3.jpg on a set of cycles of length three of the graph Γ is considered and a geometrical interpretation of the p-adic Maslov index is given in terms of this action.
Reeve, Joanne
2010-01-01
Patient-centredness is a core value of general practice; it is defined as the interpersonal processes that support the holistic care of individuals. To date, efforts to demonstrate their relationship to patient outcomes have been disappointing, whilst some studies suggest values may be more rhetoric than reality. Contextual issues influence the quality of patient-centred consultations, impacting on outcomes. The legitimate use of knowledge, or evidence, is a defining aspect of modern practice, and has implications for patient-centredness. Based on a critical review of the literature, on my own empirical research, and on reflections from my clinical practice, I critique current models of the use of knowledge in supporting individualised care. Evidence-Based Medicine (EBM), and its implementation within health policy as Scientific Bureaucratic Medicine (SBM), define best evidence in terms of an epistemological emphasis on scientific knowledge over clinical experience. It provides objective knowledge of disease, including quantitative estimates of the certainty of that knowledge. Whilst arguably appropriate for secondary care, involving episodic care of selected populations referred in for specialist diagnosis and treatment of disease, application to general practice can be questioned given the complex, dynamic and uncertain nature of much of the illness that is treated. I propose that general practice is better described by a model of Interpretive Medicine (IM): the critical, thoughtful, professional use of an appropriate range of knowledges in the dynamic, shared exploration and interpretation of individual illness experience, in order to support the creative capacity of individuals in maintaining their daily lives. Whilst the generation of interpreted knowledge is an essential part of daily general practice, the profession does not have an adequate framework by which this activity can be externally judged to have been done well. Drawing on theory related to the
Graph run-length matrices for histopathological image segmentation.
Tosun, Akif Burak; Gunduz-Demir, Cigdem
2011-03-01
The histopathological examination of tissue specimens is essential for cancer diagnosis and grading. However, this examination is subject to a considerable amount of observer variability as it mainly relies on visual interpretation of pathologists. To alleviate this problem, it is very important to develop computational quantitative tools, for which image segmentation constitutes the core step. In this paper, we introduce an effective and robust algorithm for the segmentation of histopathological tissue images. This algorithm incorporates the background knowledge of the tissue organization into segmentation. For this purpose, it quantifies spatial relations of cytological tissue components by constructing a graph and uses this graph to define new texture features for image segmentation. This new texture definition makes use of the idea of gray-level run-length matrices. However, it considers the runs of cytological components on a graph to form a matrix, instead of considering the runs of pixel intensities. Working with colon tissue images, our experiments demonstrate that the texture features extracted from "graph run-length matrices" lead to high segmentation accuracies, also providing a reasonable number of segmented regions. Compared with four other segmentation algorithms, the results show that the proposed algorithm is more effective in histopathological image segmentation.
Graph theory findings in the pathophysiology of temporal lobe epilepsy
Chiang, Sharon; Haneef, Zulfi
2014-01-01
Temporal lobe epilepsy (TLE) is the most common form of adult epilepsy. Accumulating evidence has shown that TLE is a disorder of abnormal epileptogenic networks, rather than focal sources. Graph theory allows for a network-based representation of TLE brain networks, and has potential to illuminate characteristics of brain topology conducive to TLE pathophysiology, including seizure initiation and spread. We review basic concepts which we believe will prove helpful in interpreting results rapidly emerging from graph theory research in TLE. In addition, we summarize the current state of graph theory findings in TLE as they pertain its pathophysiology. Several common findings have emerged from the many modalities which have been used to study TLE using graph theory, including structural MRI, diffusion tensor imaging, surface EEG, intracranial EEG, magnetoencephalography, functional MRI, cell cultures, simulated models, and mouse models, involving increased regularity of the interictal network configuration, altered local segregation and global integration of the TLE network, and network reorganization of temporal lobe and limbic structures. As different modalities provide different views of the same phenomenon, future studies integrating data from multiple modalities are needed to clarify findings and contribute to the formation of a coherent theory on the pathophysiology of TLE. PMID:24831083
Graph theory findings in the pathophysiology of temporal lobe epilepsy.
Chiang, Sharon; Haneef, Zulfi
2014-07-01
Temporal lobe epilepsy (TLE) is the most common form of adult epilepsy. Accumulating evidence has shown that TLE is a disorder of abnormal epileptogenic networks, rather than focal sources. Graph theory allows for a network-based representation of TLE brain networks, and has potential to illuminate characteristics of brain topology conducive to TLE pathophysiology, including seizure initiation and spread. We review basic concepts which we believe will prove helpful in interpreting results rapidly emerging from graph theory research in TLE. In addition, we summarize the current state of graph theory findings in TLE as they pertain its pathophysiology. Several common findings have emerged from the many modalities which have been used to study TLE using graph theory, including structural MRI, diffusion tensor imaging, surface EEG, intracranial EEG, magnetoencephalography, functional MRI, cell cultures, simulated models, and mouse models, involving increased regularity of the interictal network configuration, altered local segregation and global integration of the TLE network, and network reorganization of temporal lobe and limbic structures. As different modalities provide different views of the same phenomenon, future studies integrating data from multiple modalities are needed to clarify findings and contribute to the formation of a coherent theory on the pathophysiology of TLE.
Comparison Graph of Sea Ice Minimum - 2010
This animated graph tracks the retreat of sea ice, measured in millions of square kilometers, averaged from the start of the satellite record in 1979 through 2000 (white). Next, the graph follows t...
Mathematical Minute: Rotating a Function Graph
ERIC Educational Resources Information Center
Bravo, Daniel; Fera, Joseph
2013-01-01
Using calculus only, we find the angles you can rotate the graph of a differentiable function about the origin and still obtain a function graph. We then apply the solution to odd and even degree polynomials.
Standard Distributions: One Graph Fits All
ERIC Educational Resources Information Center
Wagner, Clifford H.
2007-01-01
Standard distributions are ubiquitous but not unique. With suitable scaling, the graph of a standard distribution serves as the graph for every distribution in the family. The standard exponential can easily be taught in elementary statistics courses.
Graphing and Social Studies: An Interdisciplinary Activity.
ERIC Educational Resources Information Center
Brehm, Julia L.
1996-01-01
Describes a graphing activity that promotes mathematical connections with social studies lessons. Students should be familiar with graphing on the Cartesian coordinate system to play this variation of the game Battleship on maps of various regions of the world. (AIM)
Torsional rigidity, isospectrality and quantum graphs
NASA Astrophysics Data System (ADS)
Colladay, Don; Kaganovskiy, Leon; McDonald, Patrick
2017-01-01
We study torsional rigidity for graph and quantum graph analogs of well-known pairs of isospectral non-isometric planar domains. We prove that such isospectral pairs are distinguished by torsional rigidity.
Humidity Graphs for All Seasons.
ERIC Educational Resources Information Center
Esmael, F.
1982-01-01
In a previous article in this journal (Vol. 17, p358, 1979), a wet-bulb depression table was recommended for two simple experiments to determine relative humidity. However, the use of a graph is suggested because it gives the relative humidity directly from the wet and dry bulb readings. (JN)
NASA Astrophysics Data System (ADS)
Prudente, Matthew James
Given a graph G with pebbles on the vertices, we define a pebbling move as removing two pebbles from a vertex u, placing one pebble on a neighbor v, and discarding the other pebble, like a toll. The pebbling number pi( G) is the least number of pebbles needed so that every arrangement of pi(G) pebbles can place a pebble on any vertex through a sequence of pebbling moves. We introduce a new variation on graph pebbling called two-player pebbling. In this, players called the mover and the defender alternate moves, with the stipulation that the defender cannot reverse the previous move. The mover wins only if they can place a pebble on a specified vertex and the defender wins if the mover cannot. We define η(G), analogously, as the minimum number of pebbles such that given every configuration of the η( G) pebbles and every specified vertex r, the mover has a winning strategy. First, we will investigate upper bounds for η( G) on various classes of graphs and find a certain structure for which the defender has a winning strategy, no matter how many pebbles are in a configuration. Then, we characterize winning configurations for both players on a special class of diameter 2 graphs. Finally, we show winning configurations for the mover on paths using a recursive argument.
Graphs and Enhancing Maple Multiplication.
ERIC Educational Resources Information Center
Cecil, David R.; Wang, Rongdong
2002-01-01
Description of a technique in Maple programming language that automatically prints all paths of any desired length along with the name of each vertex, proceeding in order from the beginning vertex to the ending vertex for a given graph. (Author/MM)
Fibonacci Identities, Matrices, and Graphs
ERIC Educational Resources Information Center
Huang, Danrun
2005-01-01
General strategies used to help discover, prove, and generalize identities for Fibonacci numbers are described along with some properties about the determinants of square matrices. A matrix proof for identity (2) that has received immense attention from many branches of mathematics, like linear algebra, dynamical systems, graph theory and others…
Ancestral Genres of Mathematical Graphs
ERIC Educational Resources Information Center
Gerofsky, Susan
2011-01-01
Drawing from sources in gesture studies, cognitive science, the anthropology of religion and art/architecture history, this article explores cultural, bodily and cosmological resonances carried (unintentionally) by mathematical graphs on Cartesian coordinates. Concepts of asymmetric bodily spaces, grids, orthogonality, mapping and sacred spaces…
Situating Graphs as Workplace Knowledge
ERIC Educational Resources Information Center
Noss, Richard; Bakker, Arthur; Hoyles, Celia; Kent, Phillip
2007-01-01
We investigate the use and knowledge of graphs in the context of a large industrial factory. We are particularly interested in the question of "transparency", a question that has been extensively considered in the general literature on tool use and, more recently, by Michael Roth and his colleagues in the context of scientific work. Roth uses the…
Claw-Free Maximal Planar Graphs
1989-01-01
0, 1,2 and 3 points of degree 6 respectively.) Now suppose G,. has no claws for 3 < r < i and consider graph G ,+,. Graph G,+ 1 is obtained from Gr by...adjacent to a point v by N(v) and call the induced subgraph GiN(v)] the neighborhood graph of v in G . Graph G is said to be locally n-connected if for all
Chemical Applications of Graph Theory: Part II. Isomer Enumeration.
ERIC Educational Resources Information Center
Hansen, Peter J.; Jurs, Peter C.
1988-01-01
Discusses the use of graph theory to aid in the depiction of organic molecular structures. Gives a historical perspective of graph theory and explains graph theory terminology with organic examples. Lists applications of graph theory to current research projects. (ML)
ERIC Educational Resources Information Center
Paul, Karin; Kuhlthau, Carol C.; Branch, Jennifer L.; Solowan, Diane Galloway; Case, Roland; Abilock, Debbie; Eisenberg, Michael B.; Koechlin, Carol; Zwaan, Sandi; Hughes, Sandra; Low, Ann; Litch, Margaret; Lowry, Cindy; Irvine, Linda; Stimson, Margaret; Schlarb, Irene; Wilson, Janet; Warriner, Emily; Parsons, Les; Luongo-Orlando, Katherine; Hamilton, Donald
2003-01-01
Includes 19 articles that address issues related to library skills and Canadian school libraries. Topics include information literacy; inquiry learning; critical thinking and electronic research; collaborative inquiry; information skills and the Big 6 approach to problem solving; student use of online databases; library skills; Internet accuracy;…
A Comparison of Two Approaches to Training Visual Analysis of AB Graphs
ERIC Educational Resources Information Center
Wolfe, Katie; Slocum, Timothy A.
2015-01-01
Visual analysis is the primary method of evaluating data in single-subject research. Few studies have evaluated interventions to teach visual analysis skills. The purpose of this study was to evaluate systematic instruction, delivered using computer-based intervention or a recorded lecture, on identifying changes in slope and level in AB graphs.…
Effects of Graphing, Goal Setting, and Conferencing on Reading and Math Achievement
ERIC Educational Resources Information Center
Snyder, Amy T.
2016-01-01
Improving foundational academic skills for elementary level students continues to be a challenge for classroom teachers. This study implemented weekly progress monitoring procedures using curriculum-based measurement assessments in conjunction with weekly individual student-teacher graphing and goal-setting conferences to determine the effect the…
47 CFR 80.761 - Conversion graphs.
Code of Federal Regulations, 2012 CFR
2012-10-01
... 47 Telecommunication 5 2012-10-01 2012-10-01 false Conversion graphs. 80.761 Section 80.761... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.761 Conversion graphs. The following graphs must be employed where conversion from one to the other of the indicated types of units...
Positive and Unlabeled Multi-Graph Learning.
Wu, Jia; Pan, Shirui; Zhu, Xingquan; Zhang, Chengqi; Wu, Xindong
2016-03-23
In this paper, we advance graph classification to handle multi-graph learning for complicated objects, where each object is represented as a bag of graphs and the label is only available to each bag but not individual graphs. In addition, when training classifiers, users are only given a handful of positive bags and many unlabeled bags, and the learning objective is to train models to classify previously unseen graph bags with maximum accuracy. To achieve the goal, we propose a positive and unlabeled multi-graph learning (puMGL) framework to first select informative subgraphs to convert graphs into a feature space. To utilize unlabeled bags for learning, puMGL assigns a confidence weight to each bag and dynamically adjusts its weight value to select "reliable negative bags." A number of representative graphs, selected from positive bags and identified reliable negative graph bags, form a "margin graph pool" which serves as the base for deriving subgraph patterns, training graph classifiers, and further updating the bag weight values. A closed-loop iterative process helps discover optimal subgraphs from positive and unlabeled graph bags for learning. Experimental comparisons demonstrate the performance of puMGL for classifying real-world complicated objects.
47 CFR 80.761 - Conversion graphs.
Code of Federal Regulations, 2013 CFR
2013-10-01
... 47 Telecommunication 5 2013-10-01 2013-10-01 false Conversion graphs. 80.761 Section 80.761... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.761 Conversion graphs. The following graphs must be employed where conversion from one to the other of the indicated types of units...
47 CFR 80.761 - Conversion graphs.
Code of Federal Regulations, 2010 CFR
2010-10-01
... 47 Telecommunication 5 2010-10-01 2010-10-01 false Conversion graphs. 80.761 Section 80.761... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.761 Conversion graphs. The following graphs must be employed where conversion from one to the other of the indicated types of units...
47 CFR 80.761 - Conversion graphs.
Code of Federal Regulations, 2011 CFR
2011-10-01
... 47 Telecommunication 5 2011-10-01 2011-10-01 false Conversion graphs. 80.761 Section 80.761... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.761 Conversion graphs. The following graphs must be employed where conversion from one to the other of the indicated types of units...
47 CFR 80.761 - Conversion graphs.
Code of Federal Regulations, 2014 CFR
2014-10-01
... 47 Telecommunication 5 2014-10-01 2014-10-01 false Conversion graphs. 80.761 Section 80.761... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.761 Conversion graphs. The following graphs must be employed where conversion from one to the other of the indicated types of units...
Teaching and Assessing Graphing Using Active Learning
ERIC Educational Resources Information Center
McFarland, Jenny
2010-01-01
As a college biology instructor, I often see graphs in lab reports that do not meet my expectations. I also observe that many college students do not always adequately differentiate between good and poor (or misleading) graphs. The activity described in this paper is the result of my work with students to improve their graphing literacy. The…
Some Applications of Graph Theory to Clustering
ERIC Educational Resources Information Center
Hubert, Lawrence J.
1974-01-01
The connection between graph theory and clustering is reviewed and extended. Major emphasis is on restating, in a graph-theoretic context, selected past work in clustering, and conversely, developing alternative strategies from several standard concepts used in graph theory per se. (Author/RC)
Graph Partitioning Models for Parallel Computing
Hendrickson, B.; Kolda, T.G.
1999-03-02
Calculations can naturally be described as graphs in which vertices represent computation and edges reflect data dependencies. By partitioning the vertices of a graph, the calculation can be divided among processors of a parallel computer. However, the standard methodology for graph partitioning minimizes the wrong metric and lacks expressibility. We survey several recently proposed alternatives and discuss their relative merits.
Improving Computer-Assisted Instruction in Teaching Higher-Order Skills
ERIC Educational Resources Information Center
Sinclair, Kelsey J.; Renshaw, Carl E.; Taylor, Holly A.
2004-01-01
Computer-assisted instruction (CAI) has been shown to enhance rote memory skills and improve higher order critical thinking skills. The challenge now is to identify what aspects of CAI improve which specific higher-order skills. This study focuses on the effectiveness of using CAI to teach logarithmic graphing and dimensional analysis. Two groups…
ERIC Educational Resources Information Center
Maltese, Adam V.; Svetina, Dubravka; Harsh, Joseph A.
2015-01-01
In the STEM fields, adequate proficiency in reading and interpreting graphs is widely held as a central element for scientific literacy given the importance of data visualizations to succinctly present complex information. Although prior research espouses methods to improve graphing proficiencies, there is little understanding about when and how…
NASA Astrophysics Data System (ADS)
Xiong, B.; Oude Elberink, S.; Vosselman, G.
2014-07-01
In the task of 3D building model reconstruction from point clouds we face the problem of recovering a roof topology graph in the presence of noise, small roof faces and low point densities. Errors in roof topology graphs will seriously affect the final modelling results. The aim of this research is to automatically correct these errors. We define the graph correction as a graph-to-graph problem, similar to the spelling correction problem (also called the string-to-string problem). The graph correction is more complex than string correction, as the graphs are 2D while strings are only 1D. We design a strategy based on a dictionary of graph edit operations to automatically identify and correct the errors in the input graph. For each type of error the graph edit dictionary stores a representative erroneous subgraph as well as the corrected version. As an erroneous roof topology graph may contain several errors, a heuristic search is applied to find the optimum sequence of graph edits to correct the errors one by one. The graph edit dictionary can be expanded to include entries needed to cope with errors that were previously not encountered. Experiments show that the dictionary with only fifteen entries already properly corrects one quarter of erroneous graphs in about 4500 buildings, and even half of the erroneous graphs in one test area, achieving as high as a 95% acceptance rate of the reconstructed models.
Dense Trivalent Graphs for Processor Interconnection,
1981-01-01
this paper is organized as follows: Sec- tion 2 introduces notation and defines the new family of graphs, which we call Moebius graphs. Section 3...the shuffle exchange [9].) Let Id denote the identity function on 2 The Moebius graph of order n (so named because the function f introduces a loop...We will write vk = p(v ). 3. DIAMETER OF THE MOEBIUS GRAPH In this section we will show that the diameter of the Moe- bius graph is bounded by L3/2 nj
Stability Properties of Inclusive Connectivity for Graphs
1993-12-01
of G . Graphs illustrating the two possible relationships between the three inclusive connectivity parameters for edges are shown in Figures 2.12 and...For simplicity in this section, we will call this graph G the "internal G graph " due to its location in the figures, and the "K4 with one edge doubly...to one copy of the subdivided K4 producing the graph in Figure 5.25. 117 1(4 with one edge Internal G graph K4 with one edge Figure 5.24 The
Proving relations between modular graph functions
NASA Astrophysics Data System (ADS)
Basu, Anirban
2016-12-01
We consider modular graph functions that arise in the low energy expansion of the four graviton amplitude in type II string theory. The vertices of these graphs are the positions of insertions of vertex operators on the toroidal worldsheet, while the links are the scalar Green functions connecting the vertices. Graphs with four and five links satisfy several non-trivial relations, which have been proved recently. We prove these relations by using elementary properties of Green functions and the details of the graphs. We also prove a relation between modular graph functions with six links.
Measuring geographic segregation: a graph-based approach
NASA Astrophysics Data System (ADS)
Hong, Seong-Yun; Sadahiro, Yukio
2014-04-01
Residential segregation is a multidimensional phenomenon that encompasses several conceptually distinct aspects of geographical separation between populations. While various indices have been developed as a response to different definitions of segregation, the reliance on such single-figure indices could oversimplify the complex, multidimensional phenomena. In this regard, this paper suggests an alternative graph-based approach that provides more detailed information than simple indices: The concentration profile graphically conveys information about how evenly a population group is distributed over the study region, and the spatial proximity profile depicts the degree of clustering across different threshold levels. These graphs can also be summarized into single numbers for comparative purposes, but the interpretation can be more accurate by inspecting the additional information. To demonstrate the use of these methods, the residential patterns of three major ethnic groups in Auckland, namely Māori, Pacific peoples, and Asians, are examined using the 2006 census data.
High Performance Descriptive Semantic Analysis of Semantic Graph Databases
Joslyn, Cliff A.; Adolf, Robert D.; al-Saffar, Sinan; Feo, John T.; Haglin, David J.; Mackey, Greg E.; Mizell, David W.
2011-06-02
As semantic graph database technology grows to address components ranging from extant large triple stores to SPARQL endpoints over SQL-structured relational databases, it will become increasingly important to be able to understand their inherent semantic structure, whether codified in explicit ontologies or not. Our group is researching novel methods for what we call descriptive semantic analysis of RDF triplestores, to serve purposes of analysis, interpretation, visualization, and optimization. But data size and computational complexity makes it increasingly necessary to bring high performance computational resources to bear on this task. Our research group built a novel high performance hybrid system comprising computational capability for semantic graph database processing utilizing the large multi-threaded architecture of the Cray XMT platform, conventional servers, and large data stores. In this paper we describe that architecture and our methods, and present the results of our analyses of basic properties, connected components, namespace interaction, and typed paths such for the Billion Triple Challenge 2010 dataset.
Generalized graph states based on Hadamard matrices
Cui, Shawn X.; Yu, Nengkun; Zeng, Bei
2015-07-15
Graph states are widely used in quantum information theory, including entanglement theory, quantum error correction, and one-way quantum computing. Graph states have a nice structure related to a certain graph, which is given by either a stabilizer group or an encoding circuit, both can be directly given by the graph. To generalize graph states, whose stabilizer groups are abelian subgroups of the Pauli group, one approach taken is to study non-abelian stabilizers. In this work, we propose to generalize graph states based on the encoding circuit, which is completely determined by the graph and a Hadamard matrix. We study the entanglement structures of these generalized graph states and show that they are all maximally mixed locally. We also explore the relationship between the equivalence of Hadamard matrices and local equivalence of the corresponding generalized graph states. This leads to a natural generalization of the Pauli (X, Z) pairs, which characterizes the local symmetries of these generalized graph states. Our approach is also naturally generalized to construct graph quantum codes which are beyond stabilizer codes.
Constrained Graph Optimization: Interdiction and Preservation Problems
Schild, Aaron V
2012-07-30
The maximum flow, shortest path, and maximum matching problems are a set of basic graph problems that are critical in theoretical computer science and applications. Constrained graph optimization, a variation of these basic graph problems involving modification of the underlying graph, is equally important but sometimes significantly harder. In particular, one can explore these optimization problems with additional cost constraints. In the preservation case, the optimizer has a budget to preserve vertices or edges of a graph, preventing them from being deleted. The optimizer wants to find the best set of preserved edges/vertices in which the cost constraints are satisfied and the basic graph problems are optimized. For example, in shortest path preservation, the optimizer wants to find a set of edges/vertices within which the shortest path between two predetermined points is smallest. In interdiction problems, one deletes vertices or edges from the graph with a particular cost in order to impede the basic graph problems as much as possible (for example, delete edges/vertices to maximize the shortest path between two predetermined vertices). Applications of preservation problems include optimal road maintenance, power grid maintenance, and job scheduling, while interdiction problems are related to drug trafficking prevention, network stability assessment, and counterterrorism. Computational hardness results are presented, along with heuristic methods for approximating solutions to the matching interdiction problem. Also, efficient algorithms are presented for special cases of graphs, including on planar graphs. The graphs in many of the listed applications are planar, so these algorithms have important practical implications.
On a programming language for graph algorithms
NASA Technical Reports Server (NTRS)
Rheinboldt, W. C.; Basili, V. R.; Mesztenyi, C. K.
1971-01-01
An algorithmic language, GRAAL, is presented for describing and implementing graph algorithms of the type primarily arising in applications. The language is based on a set algebraic model of graph theory which defines the graph structure in terms of morphisms between certain set algebraic structures over the node set and arc set. GRAAL is modular in the sense that the user specifies which of these mappings are available with any graph. This allows flexibility in the selection of the storage representation for different graph structures. In line with its set theoretic foundation, the language introduces sets as a basic data type and provides for the efficient execution of all set and graph operators. At present, GRAAL is defined as an extension of ALGOL 60 (revised) and its formal description is given as a supplement to the syntactic and semantic definition of ALGOL. Several typical graph algorithms are written in GRAAL to illustrate various features of the language and to show its applicability.
Efficient Graph Sequence Mining Using Reverse Search
NASA Astrophysics Data System (ADS)
Inokuchi, Akihiro; Ikuta, Hiroaki; Washio, Takashi
The mining of frequent subgraphs from labeled graph data has been studied extensively. Furthermore, much attention has recently been paid to frequent pattern mining from graph sequences. A method, called GTRACE, has been proposed to mine frequent patterns from graph sequences under the assumption that changes in graphs are gradual. Although GTRACE mines the frequent patterns efficiently, it still needs substantial computation time to mine the patterns from graph sequences containing large graphs and long sequences. In this paper, we propose a new version of GTRACE that permits efficient mining of frequent patterns based on the principle of a reverse search. The underlying concept of the reverse search is a general scheme for designing efficient algorithms for hard enumeration problems. Our performance study shows that the proposed method is efficient and scalable for mining both long and large graph sequence patterns and is several orders of magnitude faster than the original GTRACE.
Fast Approximate Quadratic Programming for Graph Matching
Vogelstein, Joshua T.; Conroy, John M.; Lyzinski, Vince; Podrazik, Louis J.; Kratzer, Steven G.; Harley, Eric T.; Fishkind, Donniell E.; Vogelstein, R. Jacob; Priebe, Carey E.
2015-01-01
Quadratic assignment problems arise in a wide variety of domains, spanning operations research, graph theory, computer vision, and neuroscience, to name a few. The graph matching problem is a special case of the quadratic assignment problem, and graph matching is increasingly important as graph-valued data is becoming more prominent. With the aim of efficiently and accurately matching the large graphs common in big data, we present our graph matching algorithm, the Fast Approximate Quadratic assignment algorithm. We empirically demonstrate that our algorithm is faster and achieves a lower objective value on over 80% of the QAPLIB benchmark library, compared with the previous state-of-the-art. Applying our algorithm to our motivating example, matching C. elegans connectomes (brain-graphs), we find that it efficiently achieves performance. PMID:25886624
Molecular graph convolutions: moving beyond fingerprints.
Kearnes, Steven; McCloskey, Kevin; Berndl, Marc; Pande, Vijay; Riley, Patrick
2016-08-01
Molecular "fingerprints" encoding structural information are the workhorse of cheminformatics and machine learning in drug discovery applications. However, fingerprint representations necessarily emphasize particular aspects of the molecular structure while ignoring others, rather than allowing the model to make data-driven decisions. We describe molecular graph convolutions, a machine learning architecture for learning from undirected graphs, specifically small molecules. Graph convolutions use a simple encoding of the molecular graph-atoms, bonds, distances, etc.-which allows the model to take greater advantage of information in the graph structure. Although graph convolutions do not outperform all fingerprint-based methods, they (along with other graph-based methods) represent a new paradigm in ligand-based virtual screening with exciting opportunities for future improvement.
Fast approximate quadratic programming for graph matching.
Vogelstein, Joshua T; Conroy, John M; Lyzinski, Vince; Podrazik, Louis J; Kratzer, Steven G; Harley, Eric T; Fishkind, Donniell E; Vogelstein, R Jacob; Priebe, Carey E
2015-01-01
Quadratic assignment problems arise in a wide variety of domains, spanning operations research, graph theory, computer vision, and neuroscience, to name a few. The graph matching problem is a special case of the quadratic assignment problem, and graph matching is increasingly important as graph-valued data is becoming more prominent. With the aim of efficiently and accurately matching the large graphs common in big data, we present our graph matching algorithm, the Fast Approximate Quadratic assignment algorithm. We empirically demonstrate that our algorithm is faster and achieves a lower objective value on over 80% of the QAPLIB benchmark library, compared with the previous state-of-the-art. Applying our algorithm to our motivating example, matching C. elegans connectomes (brain-graphs), we find that it efficiently achieves performance.
Hierarchical structure of the logical Internet graph
NASA Astrophysics Data System (ADS)
Ge, Zihui; Figueiredo, Daniel R.; Jaiswal, Sharad; Gao, Lixin
2001-07-01
The study of the Internet topology has recently received much attention from the research community. In particular, the observation that the network graph has interesting properties, such as power laws, that might be explored in a myriad of ways. Most of the work in characterizing the Internet graph is based on the physical network graph, i.e., the connectivity graph. In this paper we investigate how logical relationships between nodes of the AS graph can be used to gain insight to its structure. We characterize the logical graph using various metrics and identify the presence of power laws in the number of customers that a provider has. Using these logical relationships we define a structural model of the AS graph. The model highlights the hierarchical nature of logical relationships and the preferential connection to larger providers. We also investigate the consistency of this model over time and observe interesting properties of the hierarchical structure.
A preliminary study on atrial epicardial mapping signals based on Graph Theory.
Sun, Liqian; Yang, Cuiwei; Zhang, Lin; Chen, Ying; Wu, Zhong; Shao, Jun
2014-07-01
In order to get a better understanding of atrial fibrillation, we introduced a method based on Graph Theory to interpret the relations of different parts of the atria. Atrial electrograms under sinus rhythm and atrial fibrillation were collected from eight living mongrel dogs with cholinergic AF model. These epicardial signals were acquired from 95 unipolar electrodes attached to the surface of the atria and four pulmonary veins. Then, we analyzed the electrode correlations using Graph Theory. The topology, the connectivity and the parameters of graphs during different rhythms were studied. Our results showed that the connectivity of graphs varied from sinus rhythm to atrial fibrillation and there were parameter gradients in various parts of the atria. The results provide spatial insight into the interaction between different parts of the atria and the method may have its potential for studying atrial fibrillation.
Noshing on Numbers: Using and Interpreting Data in Activities
NASA Astrophysics Data System (ADS)
Shupla, C. B.
2014-07-01
Students must learn how to plot and analyze data as a fundamental science and math skill. Data must also be incorporated into activities in meaningful ways that allow students to build understanding of the concepts being shared. In this workshop, attendees participated in three graphing activities, which served as the basis for discussion of these numerical literacy issues in the science classroom.
DI: An interactive debugging interpreter for applicative languages
Skedzielewski, S.K.; Yates, R.K.; Oldehoeft, R.R.
1987-03-12
The DI interpreter is both a debugger and interpreter of SISLAL programs. Its use as a program interpreter is only a small part of its role; it is designed to be a tool for studying compilation techniques for applicative languages. DI interprets dataflow graphs expressed in the IF1 and IF2 languages, and is heavily instrumented to report the activity of dynamic storage activity, reference counting, copying and updating of structured data values. It also aids the SISAL language evaluation by providing an interim execution vehicle for SISAL programs. DI provides determinate, sequential interpretation of graph nodes for sequential and parallel operations in a canonical order. As a debugging aid, DI allows tracing, breakpointing, and interactive display of program data values. DI handles creation of SISAL and IF1 error values for each data type and propagates them according to a well-defined algebra. We have begun to implement IF1 optimizers and have measured the improvements with DI.
Graph distance for complex networks
NASA Astrophysics Data System (ADS)
Shimada, Yutaka; Hirata, Yoshito; Ikeguchi, Tohru; Aihara, Kazuyuki
2016-10-01
Networks are widely used as a tool for describing diverse real complex systems and have been successfully applied to many fields. The distance between networks is one of the most fundamental concepts for properly classifying real networks, detecting temporal changes in network structures, and effectively predicting their temporal evolution. However, this distance has rarely been discussed in the theory of complex networks. Here, we propose a graph distance between networks based on a Laplacian matrix that reflects the structural and dynamical properties of networked dynamical systems. Our results indicate that the Laplacian-based graph distance effectively quantifies the structural difference between complex networks. We further show that our approach successfully elucidates the temporal properties underlying temporal networks observed in the context of face-to-face human interactions.
Graph distance for complex networks
Shimada, Yutaka; Hirata, Yoshito; Ikeguchi, Tohru; Aihara, Kazuyuki
2016-01-01
Networks are widely used as a tool for describing diverse real complex systems and have been successfully applied to many fields. The distance between networks is one of the most fundamental concepts for properly classifying real networks, detecting temporal changes in network structures, and effectively predicting their temporal evolution. However, this distance has rarely been discussed in the theory of complex networks. Here, we propose a graph distance between networks based on a Laplacian matrix that reflects the structural and dynamical properties of networked dynamical systems. Our results indicate that the Laplacian-based graph distance effectively quantifies the structural difference between complex networks. We further show that our approach successfully elucidates the temporal properties underlying temporal networks observed in the context of face-to-face human interactions. PMID:27725690
Graph Embedded Extreme Learning Machine.
Iosifidis, Alexandros; Tefas, Anastasios; Pitas, Ioannis
2016-01-01
In this paper, we propose a novel extension of the extreme learning machine (ELM) algorithm for single-hidden layer feedforward neural network training that is able to incorporate subspace learning (SL) criteria on the optimization process followed for the calculation of the network's output weights. The proposed graph embedded ELM (GEELM) algorithm is able to naturally exploit both intrinsic and penalty SL criteria that have been (or will be) designed under the graph embedding framework. In addition, we extend the proposed GEELM algorithm in order to be able to exploit SL criteria in arbitrary (even infinite) dimensional ELM spaces. We evaluate the proposed approach on eight standard classification problems and nine publicly available datasets designed for three problems related to human behavior analysis, i.e., the recognition of human face, facial expression, and activity. Experimental results denote the effectiveness of the proposed approach, since it outperforms other ELM-based classification schemes in all the cases.
Line graphs as social networks
NASA Astrophysics Data System (ADS)
Krawczyk, M. J.; Muchnik, L.; Mańka-Krasoń, A.; Kułakowski, K.
2011-07-01
It was demonstrated recently that the line graphs are clustered and assortative. These topological features are known to characterize some social networks [M.E.J. Newman, Y. Park, Why social networks are different from other types of networks, Phys. Rev. E 68 (2003) 036122]; it was argued that this similarity reveals their cliquey character. In the model proposed here, a social network is the line graph of an initial network of families, communities, interest groups, school classes and small companies. These groups play the role of nodes, and individuals are represented by links between these nodes. The picture is supported by the data on the LiveJournal network of about 8×10 6 people.
Relativity on Rotated Graph Paper
NASA Astrophysics Data System (ADS)
Salgado, Roberto
2011-11-01
We present visual calculations in special relativity using spacetime diagrams drawn on graph paper that has been rotated by 45 degrees. The rotated lines represent lightlike directions in Minkowski spacetime, and the boxes in the grid (called light-clock diamonds) represent ticks of an inertial observer's lightclock. We show that many quantitative results can be read off a spacetime diagram by counting boxes, using a minimal amount of algebra.
Dynamic molecular graphs: "hopping" structures.
Cortés-Guzmán, Fernando; Rocha-Rinza, Tomas; Guevara-Vela, José Manuel; Cuevas, Gabriel; Gómez, Rosa María
2014-05-05
This work aims to contribute to the discussion about the suitability of bond paths and bond-critical points as indicators of chemical bonding defined within the theoretical framework of the quantum theory of atoms in molecules. For this purpose, we consider the temporal evolution of the molecular structure of [Fe{C(CH2 )3 }(CO)3 ] throughout Born-Oppenheimer molecular dynamics (BOMD), which illustrates the changing behaviour of the molecular graph (MG) of an electronic system. Several MGs with significant lifespans are observed across the BOMD simulations. The bond paths between the trimethylenemethane and the metallic core are uninterruptedly formed and broken. This situation is reminiscent of a "hopping" ligand over the iron atom. The molecular graph wherein the bonding between trimethylenemethane and the iron atom takes place only by means of the tertiary carbon atom has the longest lifespan of all the considered structures, which is consistent with the MG found by X-ray diffraction experiments and quantum chemical calculations. In contrast, the η(4) complex predicted by molecular-orbital theory has an extremely brief lifetime. The lifespan of different molecular structures is related to bond descriptors on the basis of the topology of the electron density such as the ellipticities at the FeCH2 bond-critical points and electron delocalisation indices. This work also proposes the concept of a dynamic molecular graph composed of the different structures found throughout the BOMD trajectories in analogy to a resonance hybrid of Lewis structures. It is our hope that the notion of dynamic molecular graphs will prove useful in the discussion of electronic systems, in particular for those in which analysis on the basis of static structures leads to controversial conclusions.
Affinity learning with diffusion on tensor product graph.
Yang, Xingwei; Prasad, Lakshman; Latecki, Longin Jan
2013-01-01
In many applications, we are given a finite set of data points sampled from a data manifold and represented as a graph with edge weights determined by pairwise similarities of the samples. Often the pairwise similarities (which are also called affinities) are unreliable due to noise or due to intrinsic difficulties in estimating similarity values of the samples. As observed in several recent approaches, more reliable similarities can be obtained if the original similarities are diffused in the context of other data points, where the context of each point is a set of points most similar to it. Compared to the existing methods, our approach differs in two main aspects. First, instead of diffusing the similarity information on the original graph, we propose to utilize the tensor product graph (TPG) obtained by the tensor product of the original graph with itself. Since TPG takes into account higher order information, it is not a surprise that we obtain more reliable similarities. However, it comes at the price of higher order computational complexity and storage requirement. The key contribution of the proposed approach is that the information propagation on TPG can be computed with the same computational complexity and the same amount of storage as the propagation on the original graph. We prove that a graph diffusion process on TPG is equivalent to a novel iterative algorithm on the original graph, which is guaranteed to converge. After its convergence we obtain new edge weights that can be interpreted as new, learned affinities. We stress that the affinities are learned in an unsupervised setting. We illustrate the benefits of the proposed approach for data manifolds composed of shapes, images, and image patches on two very different tasks of image retrieval and image segmentation. With learned affinities, we achieve the bull's eye retrieval score of 99.99 percent on the MPEG-7 shape dataset, which is much higher than the state-of-the-art algorithms. When the data
Phillips, David J; McGlaughlin, Alec; Ruth, David; Jager, Leah R; Soldan, Anja
2015-01-01
Graph theory is increasingly being used to study brain connectivity across the spectrum of Alzheimer's disease (AD), but prior findings have been inconsistent, likely reflecting methodological differences. We systematically investigated how methods of graph creation (i.e., type of correlation matrix and edge weighting) affect structural network properties and group differences. We estimated the structural connectivity of brain networks based on correlation maps of cortical thickness obtained from MRI. Four groups were compared: 126 cognitively normal older adults, 103 individuals with Mild Cognitive Impairment (MCI) who retained MCI status for at least 3 years (stable MCI), 108 individuals with MCI who progressed to AD-dementia within 3 years (progressive MCI), and 105 individuals with AD-dementia. Small-world measures of connectivity (characteristic path length and clustering coefficient) differed across groups, consistent with prior studies. Groups were best discriminated by the Randić index, which measures the degree to which highly connected nodes connect to other highly connected nodes. The Randić index differentiated the stable and progressive MCI groups, suggesting that it might be useful for tracking and predicting the progression of AD. Notably, however, the magnitude and direction of group differences in all three measures were dependent on the method of graph creation, indicating that it is crucial to take into account how graphs are constructed when interpreting differences across diagnostic groups and studies. The algebraic connectivity measures showed few group differences, independent of the method of graph construction, suggesting that global connectivity as it relates to node degree is not altered in early AD.
Topological structure of dictionary graphs
NASA Astrophysics Data System (ADS)
Fukś, Henryk; Krzemiński, Mark
2009-09-01
We investigate the topological structure of the subgraphs of dictionary graphs constructed from WordNet and Moby thesaurus data. In the process of learning a foreign language, the learner knows only a subset of all words of the language, corresponding to a subgraph of a dictionary graph. When this subgraph grows with time, its topological properties change. We introduce the notion of the pseudocore and argue that the growth of the vocabulary roughly follows decreasing pseudocore numbers—that is, one first learns words with a high pseudocore number followed by smaller pseudocores. We also propose an alternative strategy for vocabulary growth, involving decreasing core numbers as opposed to pseudocore numbers. We find that as the core or pseudocore grows in size, the clustering coefficient first decreases, then reaches a minimum and starts increasing again. The minimum occurs when the vocabulary reaches a size between 103 and 104. A simple model exhibiting similar behavior is proposed. The model is based on a generalized geometric random graph. Possible implications for language learning are discussed.
Metabolic networks: beyond the graph.
Bernal, Andrés; Daza, Edgar
2011-06-01
Drugs are devised to enter into the metabolism of an organism in order to produce a desired effect. From the chemical point of view, cellular metabolism is constituted by a complex network of reactions transforming metabolites one in each other. Knowledge on the structure of this network could help to develop novel methods for drug design, and to comprehend the root of known unexpected side effects. Many large-scale studies on the structure of metabolic networks have been developed following models based on different kinds of graphs as the fundamental image of the reaction network. Graphs models, however, comport wrong assumptions regarding the structure of reaction networks that may lead into wrong conclusions if they are not taken into account. In this article we critically review some graph-theoretical approaches to the analysis of centrality, vulnerability and modularity of metabolic networks, analyzing their limitations in estimating these key network properties, consider some proposals explicit or implicitly based on directed hypergraphs regarding their ability to overcome these issues, and review some recent implementation improvements that make the application of these models in increasingly large networks a viable option.
What is the difference between the breakpoint graph and the de Bruijn graph?
Lin, Yu; Nurk, Sergey; Pevzner, Pavel A
2014-01-01
The breakpoint graph and the de Bruijn graph are two key data structures in the studies of genome rearrangements and genome assembly. However, the classical breakpoint graphs are defined on two genomes (represented as sequences of synteny blocks), while the classical de Bruijn graphs are defined on a single genome (represented as DNA strings). Thus, the connection between these two graph models is not explicit. We generalize the notions of both the breakpoint graph and the de Bruijn graph, and make it transparent that the breakpoint graph and the de Bruijn graph are mathematically equivalent. The explicit description of the connection between these important data structures provides a bridge between two previously separated bioinformatics communities studying genome rearrangements and genome assembly.
ERIC Educational Resources Information Center
Barton, Erin E.; Reichow, Brian
2012-01-01
The interpretation of single-case data requires systematic visual analysis across and within conditions. Graphs are a vital component for analyzing and communicating single-case design data and a necessary tool for applied researchers and practitioners. Several articles have been published with task analyses for graphing data with the new versions…
Graph theoretical analysis of climate data
NASA Astrophysics Data System (ADS)
Zerenner, T.; Hense, A.
2012-04-01
Applying methods from graph and network theory to climatological data is a quite new approach and contains numerous difficulties. The atmosphere is a high dimensional and complex dynamical system which per se does not show a network-like structure. It does not consist of well-defined nodes and edges. Thus considering such a system as a network or graph inevitably involves radical simplifications and ambiguities. Nevertheless network analysis has provided useful results for different kinds of complex systems for example in biology or medical science (neural and gene interaction networks). The application of these methods on climate data provides interesting results as well. If the network construction is based on the correlation matrix of the underlying data, the resulting network structures show many well known patterns and characteristics of the atmospheric circulation (Tsonis et al. 2006, Donges et al. 2009). The interpretation of these network structures is yet questionable. Using Pearson Correlation for network construction does not allow to differ between direct and indirect dependencies. An edge does not necessarily represent a causal connection. An interpretation of these structures for instance concerning the stability of the climate system is therefore doubtful. Gene interaction networks for example are often constructed using partial correlations (Wu et al. 2003), which makes it possible to distinguish between direct and indirect dependencies. Although a high value of partial correlation does not guarantee causality it is a step in the direction of measuring causal dependencies. This approach is known as Gaussian Graphical Models, GGMs. For high dimensional datasets such as climate data partial correlations can be obtained by calculating the precision matrix, the inverse covariance matrix. Since the maximum likelihood estimates of covariance matrices of climate datasets are singular the precision matrices can only be estimated for example by using the
Decoding Time-Varying Functional Connectivity Networks via Linear Graph Embedding Methods
Monti, Ricardo P.; Lorenz, Romy; Hellyer, Peter; Leech, Robert; Anagnostopoulos, Christoforos; Montana, Giovanni
2017-01-01
An exciting avenue of neuroscientific research involves quantifying the time-varying properties of functional connectivity networks. As a result, many methods have been proposed to estimate the dynamic properties of such networks. However, one of the challenges associated with such methods involves the interpretation and visualization of high-dimensional, dynamic networks. In this work, we employ graph embedding algorithms to provide low-dimensional vector representations of networks, thus facilitating traditional objectives such as visualization, interpretation and classification. We focus on linear graph embedding methods based on principal component analysis and regularized linear discriminant analysis. The proposed graph embedding methods are validated through a series of simulations and applied to fMRI data from the Human Connectome Project. PMID:28373838
Computing Information Value from RDF Graph Properties
al-Saffar, Sinan; Heileman, Gregory
2010-11-08
Information value has been implicitly utilized and mostly non-subjectively computed in information retrieval (IR) systems. We explicitly define and compute the value of an information piece as a function of two parameters, the first is the potential semantic impact the target information can subjectively have on its recipient's world-knowledge, and the second parameter is trust in the information source. We model these two parameters as properties of RDF graphs. Two graphs are constructed, a target graph representing the semantics of the target body of information and a context graph representing the context of the consumer of that information. We compute information value subjectively as a function of both potential change to the context graph (impact) and the overlap between the two graphs (trust). Graph change is computed as a graph edit distance measuring the dissimilarity between the context graph before and after the learning of the target graph. A particular application of this subjective information valuation is in the construction of a personalized ranking component in Web search engines. Based on our method, we construct a Web re-ranking system that personalizes the information experience for the information-consumer.
Inferring Pedigree Graphs from Genetic Distances
NASA Astrophysics Data System (ADS)
Tamura, Takeyuki; Ito, Hiro
In this paper, we study a problem of inferring blood relationships which satisfy a given matrix of genetic distances between all pairs of n nodes. Blood relationships are represented by our proposed graph class, which is called a pedigree graph. A pedigree graph is a directed acyclic graph in which the maximum indegree is at most two. We show that the number of pedigree graphs which satisfy the condition of given genetic distances may be exponential, but they can be represented by one directed acyclic graph with n nodes. Moreover, an O(n3) time algorithm which solves the problem is also given. Although phylogenetic trees and phylogenetic networks are similar data structures to pedigree graphs, it seems that inferring methods for phylogenetic trees and networks cannot be applied to infer pedigree graphs since nodes of phylogenetic trees and networks represent species whereas nodes of pedigree graphs represent individuals. We also show an O(n2) time algorithm which detects a contradiction between a given pedigreee graph and distance matrix of genetic distances.
JavaGenes: Evolving Graphs with Crossover
NASA Technical Reports Server (NTRS)
Globus, Al; Atsatt, Sean; Lawton, John; Wipke, Todd
2000-01-01
Genetic algorithms usually use string or tree representations. We have developed a novel crossover operator for a directed and undirected graph representation, and used this operator to evolve molecules and circuits. Unlike strings or trees, a single point in the representation cannot divide every possible graph into two parts, because graphs may contain cycles. Thus, the crossover operator is non-trivial. A steady-state, tournament selection genetic algorithm code (JavaGenes) was written to implement and test the graph crossover operator. All runs were executed by cycle-scavagging on networked workstations using the Condor batch processing system. The JavaGenes code has evolved pharmaceutical drug molecules and simple digital circuits. Results to date suggest that JavaGenes can evolve moderate sized drug molecules and very small circuits in reasonable time. The algorithm has greater difficulty with somewhat larger circuits, suggesting that directed graphs (circuits) are more difficult to evolve than undirected graphs (molecules), although necessary differences in the crossover operator may also explain the results. In principle, JavaGenes should be able to evolve other graph-representable systems, such as transportation networks, metabolic pathways, and computer networks. However, large graphs evolve significantly slower than smaller graphs, presumably because the space-of-all-graphs explodes combinatorially with graph size. Since the representation strongly affects genetic algorithm performance, adding graphs to the evolutionary programmer's bag-of-tricks should be beneficial. Also, since graph evolution operates directly on the phenotype, the genotype-phenotype translation step, common in genetic algorithm work, is eliminated.
A New SAS program for behavioral analysis of electrical penetration graph data
Technology Transfer Automated Retrieval System (TEKTRAN)
Monitoring feeding behaviors of insects whose piercing-sucking mouthparts are inserted into plant tissue is done by making the insect part of an electronic circuit, using electropenetrography (EPG). Fluctuating voltage signals in the circuit are graphed, and resulting waveforms are interpreted as sp...
ERIC Educational Resources Information Center
Carlisle, Lynn
This document presents one module in a set of training resources for trainers to use with parents and/or professionals serving children with disabilities; focus is on communication skills. The modules stress content and activities that build skills and offer resources to promote parent-professional collaboration. Each training module takes about 2…
API Requirements for Dynamic Graph Prediction
Gallagher, B; Eliassi-Rad, T
2006-10-13
Given a large-scale time-evolving multi-modal and multi-relational complex network (a.k.a., a large-scale dynamic semantic graph), we want to implement algorithms that discover patterns of activities on the graph and learn predictive models of those discovered patterns. This document outlines the application programming interface (API) requirements for fast prototyping of feature extraction, learning, and prediction algorithms on large dynamic semantic graphs. Since our algorithms must operate on large-scale dynamic semantic graphs, we have chosen to use the graph API developed in the CASC Complex Networks Project. This API is supported on the back end by a semantic graph database (developed by Scott Kohn and his team). The advantages of using this API are (i) we have full-control of its development and (ii) the current API meets almost all of the requirements outlined in this document.
Fast generation of sparse random kernel graphs
Hagberg, Aric; Lemons, Nathan; Du, Wen -Bo
2015-09-10
The development of kernel-based inhomogeneous random graphs has provided models that are flexible enough to capture many observed characteristics of real networks, and that are also mathematically tractable. We specify a class of inhomogeneous random graph models, called random kernel graphs, that produces sparse graphs with tunable graph properties, and we develop an efficient generation algorithm to sample random instances from this model. As real-world networks are usually large, it is essential that the run-time of generation algorithms scales better than quadratically in the number of vertices n. We show that for many practical kernels our algorithm runs in time at most ο(n(logn)²). As an example, we show how to generate samples of power-law degree distribution graphs with tunable assortativity.
Fast generation of sparse random kernel graphs
Hagberg, Aric; Lemons, Nathan; Du, Wen -Bo
2015-09-10
The development of kernel-based inhomogeneous random graphs has provided models that are flexible enough to capture many observed characteristics of real networks, and that are also mathematically tractable. We specify a class of inhomogeneous random graph models, called random kernel graphs, that produces sparse graphs with tunable graph properties, and we develop an efficient generation algorithm to sample random instances from this model. As real-world networks are usually large, it is essential that the run-time of generation algorithms scales better than quadratically in the number of vertices n. We show that for many practical kernels our algorithm runs in timemore » at most ο(n(logn)²). As an example, we show how to generate samples of power-law degree distribution graphs with tunable assortativity.« less
Molecular graph convolutions: moving beyond fingerprints
NASA Astrophysics Data System (ADS)
Kearnes, Steven; McCloskey, Kevin; Berndl, Marc; Pande, Vijay; Riley, Patrick
2016-08-01
Molecular "fingerprints" encoding structural information are the workhorse of cheminformatics and machine learning in drug discovery applications. However, fingerprint representations necessarily emphasize particular aspects of the molecular structure while ignoring others, rather than allowing the model to make data-driven decisions. We describe molecular graph convolutions, a machine learning architecture for learning from undirected graphs, specifically small molecules. Graph convolutions use a simple encoding of the molecular graph—atoms, bonds, distances, etc.—which allows the model to take greater advantage of information in the graph structure. Although graph convolutions do not outperform all fingerprint-based methods, they (along with other graph-based methods) represent a new paradigm in ligand-based virtual screening with exciting opportunities for future improvement.
Replica methods for loopy sparse random graphs
NASA Astrophysics Data System (ADS)
Coolen, ACC
2016-03-01
I report on the development of a novel statistical mechanical formalism for the analysis of random graphs with many short loops, and processes on such graphs. The graphs are defined via maximum entropy ensembles, in which both the degrees (via hard constraints) and the adjacency matrix spectrum (via a soft constraint) are prescribed. The sum over graphs can be done analytically, using a replica formalism with complex replica dimensions. All known results for tree-like graphs are recovered in a suitable limit. For loopy graphs, the emerging theory has an appealing and intuitive structure, suggests how message passing algorithms should be adapted, and what is the structure of theories describing spin systems on loopy architectures. However, the formalism is still largely untested, and may require further adjustment and refinement. This paper is dedicated to the memory of our colleague and friend Jun-Ichi Inoue, with whom the author has had the great pleasure and privilege of collaborating.
ERIC Educational Resources Information Center
Angawi, Rihab F.
2014-01-01
To address third- and fourth-year chemistry students' difficulties with the challenge of interpreting [superscript 1]H NMR spectra, a problem solving-cooperative learning technique was incorporated in a Spectra of Organic Compounds course. Using this approach helped students deepen their understanding of the basics of [superscript 1]H NMR…
Interpretation Of Biomechanical Data To A Gymnastics Coach
NASA Astrophysics Data System (ADS)
Shierman, Gail
1982-02-01
Several trials of many different gymnastics skills on various pieces of apparatus were filmed and the results were studied with the coach. The time to accomplish the entire skill as well as the time for each segment of the skill was important to the coach. He was also interested in angle of release or push-off and the path of the center of gravity. Lastly, graphs of velocities and accelerations of limb segments were revealing to the coach. Biomechanical analysis has helped him see why the performances were good; he is more interested in working with the investigator in all the events in gymnastics through the medium of cinematography.
Spectral correlations of individual quantum graphs
Gnutzmann, Sven; Altland, Alexander
2005-11-01
We investigate the spectral properties of chaotic quantum graphs. We demonstrate that the energy-average over the spectrum of individual graphs can be traded for the functional average over a supersymmetric nonlinear {sigma}-model action. This proves that spectral correlations of individual quantum graphs behave according to the predictions of Wigner-Dyson random matrix theory. We explore the stability of the universal random matrix behavior with regard to perturbations, and discuss the crossover between different types of symmetries.
Gnutzmann, Sven; Waltner, Daniel
2016-12-01
We consider exact and asymptotic solutions of the stationary cubic nonlinear Schrödinger equation on metric graphs. We focus on some basic example graphs. The asymptotic solutions are obtained using the canonical perturbation formalism developed in our earlier paper [S. Gnutzmann and D. Waltner, Phys. Rev. E 93, 032204 (2016)2470-004510.1103/PhysRevE.93.032204]. For closed example graphs (interval, ring, star graph, tadpole graph), we calculate spectral curves and show how the description of spectra reduces to known characteristic functions of linear quantum graphs in the low-intensity limit. Analogously for open examples, we show how nonlinear scattering of stationary waves arises and how it reduces to known linear scattering amplitudes at low intensities. In the short-wavelength asymptotics we discuss how genuine nonlinear effects may be described using the leading order of canonical perturbation theory: bifurcation of spectral curves (and the corresponding solutions) in closed graphs and multistability in open graphs.
NASA Astrophysics Data System (ADS)
Gnutzmann, Sven; Waltner, Daniel
2016-12-01
We consider exact and asymptotic solutions of the stationary cubic nonlinear Schrödinger equation on metric graphs. We focus on some basic example graphs. The asymptotic solutions are obtained using the canonical perturbation formalism developed in our earlier paper [S. Gnutzmann and D. Waltner, Phys. Rev. E 93, 032204 (2016), 10.1103/PhysRevE.93.032204]. For closed example graphs (interval, ring, star graph, tadpole graph), we calculate spectral curves and show how the description of spectra reduces to known characteristic functions of linear quantum graphs in the low-intensity limit. Analogously for open examples, we show how nonlinear scattering of stationary waves arises and how it reduces to known linear scattering amplitudes at low intensities. In the short-wavelength asymptotics we discuss how genuine nonlinear effects may be described using the leading order of canonical perturbation theory: bifurcation of spectral curves (and the corresponding solutions) in closed graphs and multistability in open graphs.
The alignment-distribution graph
NASA Technical Reports Server (NTRS)
Chatterjee, Siddhartha; Gilbert, John R.; Schreiber, Robert
1993-01-01
Implementing a data-parallel language such as Fortran 90 on a distributed-memory parallel computer requires distributing aggregate data objects (such as arrays) among the memory modules attached to the processors. The mapping of objects to the machine determines the amount of residual communication needed to bring operands of parallel operations into alignment with each other. We present a program representation called the alignment-distribution graph that makes these communication requirements explicit. We describe the details of the representation, show how to model communication cost in this framework, and outline several algorithms for determining object mappings that approximately minimize residual communication.
The alignment-distribution graph
NASA Technical Reports Server (NTRS)
Chatterjee, Siddhartha; Gilbert, John R.; Schreiber, Robert
1993-01-01
Implementing a data-parallel language such as Fortran 90 on a distributed-memory parallel computer requires distributing aggregate data objects (such as arrays) among the memory modules attached to the processors. The mapping of objects to the machine determines the amount of residual communication needed to bring operands of parallel operations into alignment with each other. We present a program representation called the alignment distribution graph that makes these communication requirements explicit. We describe the details of the representation, show how to model communication cost in this framework, and outline several algorithms for determining object mappings that approximately minimize residual communication.
NASA Astrophysics Data System (ADS)
Gosti, Giorgio; Batchelder, William H.
We address how the structure of a social communication system affects language coordination. The naming game is an abstraction of lexical acquisition dynamics, in which N agents try to find an agreement on the names to give to objects. Most results on naming games are specific to certain communication network topologies. We present two important results that are general to any graph topology: the first proves that under certain topologies the system always converges to a name-object agreement; the second proves that if these conditions are not met the system may end up in a state in which sub-networks with different competing object-name associations coexist.
Multiplex visibility graphs to investigate recurrent neural network dynamics
NASA Astrophysics Data System (ADS)
Bianchi, Filippo Maria; Livi, Lorenzo; Alippi, Cesare; Jenssen, Robert
2017-03-01
A recurrent neural network (RNN) is a universal approximator of dynamical systems, whose performance often depends on sensitive hyperparameters. Tuning them properly may be difficult and, typically, based on a trial-and-error approach. In this work, we adopt a graph-based framework to interpret and characterize internal dynamics of a class of RNNs called echo state networks (ESNs). We design principled unsupervised methods to derive hyperparameters configurations yielding maximal ESN performance, expressed in terms of prediction error and memory capacity. In particular, we propose to model time series generated by each neuron activations with a horizontal visibility graph, whose topological properties have been shown to be related to the underlying system dynamics. Successively, horizontal visibility graphs associated with all neurons become layers of a larger structure called a multiplex. We show that topological properties of such a multiplex reflect important features of ESN dynamics that can be used to guide the tuning of its hyperparamers. Results obtained on several benchmarks and a real-world dataset of telephone call data records show the effectiveness of the proposed methods.
A Factor Graph Approach to Automated GO Annotation
Spetale, Flavio E.; Tapia, Elizabeth; Krsticevic, Flavia; Roda, Fernando; Bulacio, Pilar
2016-01-01
As volume of genomic data grows, computational methods become essential for providing a first glimpse onto gene annotations. Automated Gene Ontology (GO) annotation methods based on hierarchical ensemble classification techniques are particularly interesting when interpretability of annotation results is a main concern. In these methods, raw GO-term predictions computed by base binary classifiers are leveraged by checking the consistency of predefined GO relationships. Both formal leveraging strategies, with main focus on annotation precision, and heuristic alternatives, with main focus on scalability issues, have been described in literature. In this contribution, a factor graph approach to the hierarchical ensemble formulation of the automated GO annotation problem is presented. In this formal framework, a core factor graph is first built based on the GO structure and then enriched to take into account the noisy nature of GO-term predictions. Hence, starting from raw GO-term predictions, an iterative message passing algorithm between nodes of the factor graph is used to compute marginal probabilities of target GO-terms. Evaluations on Saccharomyces cerevisiae, Arabidopsis thaliana and Drosophila melanogaster protein sequences from the GO Molecular Function domain showed significant improvements over competing approaches, even when protein sequences were naively characterized by their physicochemical and secondary structure properties or when loose noisy annotation datasets were considered. Based on these promising results and using Arabidopsis thaliana annotation data, we extend our approach to the identification of most promising molecular function annotations for a set of proteins of unknown function in Solanum lycopersicum. PMID:26771463
Multiplex visibility graphs to investigate recurrent neural network dynamics
Bianchi, Filippo Maria; Livi, Lorenzo; Alippi, Cesare; Jenssen, Robert
2017-01-01
A recurrent neural network (RNN) is a universal approximator of dynamical systems, whose performance often depends on sensitive hyperparameters. Tuning them properly may be difficult and, typically, based on a trial-and-error approach. In this work, we adopt a graph-based framework to interpret and characterize internal dynamics of a class of RNNs called echo state networks (ESNs). We design principled unsupervised methods to derive hyperparameters configurations yielding maximal ESN performance, expressed in terms of prediction error and memory capacity. In particular, we propose to model time series generated by each neuron activations with a horizontal visibility graph, whose topological properties have been shown to be related to the underlying system dynamics. Successively, horizontal visibility graphs associated with all neurons become layers of a larger structure called a multiplex. We show that topological properties of such a multiplex reflect important features of ESN dynamics that can be used to guide the tuning of its hyperparamers. Results obtained on several benchmarks and a real-world dataset of telephone call data records show the effectiveness of the proposed methods. PMID:28281563
A Factor Graph Approach to Automated GO Annotation.
Spetale, Flavio E; Tapia, Elizabeth; Krsticevic, Flavia; Roda, Fernando; Bulacio, Pilar
2016-01-01
As volume of genomic data grows, computational methods become essential for providing a first glimpse onto gene annotations. Automated Gene Ontology (GO) annotation methods based on hierarchical ensemble classification techniques are particularly interesting when interpretability of annotation results is a main concern. In these methods, raw GO-term predictions computed by base binary classifiers are leveraged by checking the consistency of predefined GO relationships. Both formal leveraging strategies, with main focus on annotation precision, and heuristic alternatives, with main focus on scalability issues, have been described in literature. In this contribution, a factor graph approach to the hierarchical ensemble formulation of the automated GO annotation problem is presented. In this formal framework, a core factor graph is first built based on the GO structure and then enriched to take into account the noisy nature of GO-term predictions. Hence, starting from raw GO-term predictions, an iterative message passing algorithm between nodes of the factor graph is used to compute marginal probabilities of target GO-terms. Evaluations on Saccharomyces cerevisiae, Arabidopsis thaliana and Drosophila melanogaster protein sequences from the GO Molecular Function domain showed significant improvements over competing approaches, even when protein sequences were naively characterized by their physicochemical and secondary structure properties or when loose noisy annotation datasets were considered. Based on these promising results and using Arabidopsis thaliana annotation data, we extend our approach to the identification of most promising molecular function annotations for a set of proteins of unknown function in Solanum lycopersicum.
Simple scale interpolator facilitates reading of graphs
NASA Technical Reports Server (NTRS)
Fetterman, D. E., Jr.
1965-01-01
Simple transparent overlay with interpolation scale facilitates accurate, rapid reading of graph coordinate points. This device can be used for enlarging drawings and locating points on perspective drawings.
Evolutionary Games of Multiplayer Cooperation on Graphs
Arranz, Jordi; Traulsen, Arne
2016-01-01
There has been much interest in studying evolutionary games in structured populations, often modeled as graphs. However, most analytical results so far have only been obtained for two-player or linear games, while the study of more complex multiplayer games has been usually tackled by computer simulations. Here we investigate evolutionary multiplayer games on graphs updated with a Moran death-Birth process. For cycles, we obtain an exact analytical condition for cooperation to be favored by natural selection, given in terms of the payoffs of the game and a set of structure coefficients. For regular graphs of degree three and larger, we estimate this condition using a combination of pair approximation and diffusion approximation. For a large class of cooperation games, our approximations suggest that graph-structured populations are stronger promoters of cooperation than populations lacking spatial structure. Computer simulations validate our analytical approximations for random regular graphs and cycles, but show systematic differences for graphs with many loops such as lattices. In particular, our simulation results show that these kinds of graphs can even lead to more stringent conditions for the evolution of cooperation than well-mixed populations. Overall, we provide evidence suggesting that the complexity arising from many-player interactions and spatial structure can be captured by pair approximation in the case of random graphs, but that it need to be handled with care for graphs with high clustering. PMID:27513946
Graph algorithms in the titan toolkit.
McLendon, William Clarence, III; Wylie, Brian Neil
2009-10-01
Graph algorithms are a key component in a wide variety of intelligence analysis activities. The Graph-Based Informatics for Non-Proliferation and Counter-Terrorism project addresses the critical need of making these graph algorithms accessible to Sandia analysts in a manner that is both intuitive and effective. Specifically we describe the design and implementation of an open source toolkit for doing graph analysis, informatics, and visualization that provides Sandia with novel analysis capability for non-proliferation and counter-terrorism.
Some Recent Results on Graph Matching,
1987-06-01
extendable graphs In Section 2 of this paper we saw how the brick decomposition procedure can be carried out on an arbitrary 1-extendable graph and that...in fact, the procedure is "canonical" in the sense that the final list of bricks so obtained is an invariant of the graph. Furthermore, we saw how...JACKSON, P. KATERINIS and A. SAITO, Toughness and the existence of k-factors, J. Graph Theory 9, 1985, 87-95. [G1] T. GALLAI, Kritische Graphen II
Bandlimited graph signal reconstruction by diffusion operator
NASA Astrophysics Data System (ADS)
Yang, Lishan; You, Kangyong; Guo, Wenbin
2016-12-01
Signal processing on graphs extends signal processing concepts and methodologies from the classical signal processing theory to data indexed by general graphs. For a bandlimited graph signal, the unknown data associated with unsampled vertices can be reconstructed from the sampled data by exploiting the spatial relationship of graph signal. In this paper, we propose a generalized analytical framework of unsampled graph signal and introduce a concept of diffusion operator which consists of local-mean and global-bias diffusion operator. Then, a diffusion operator-based iterative algorithm is proposed to reconstruct bandlimited graph signal from sampled data. In each iteration, the reconstructed residuals associated with the sampled vertices are diffused to all the unsampled vertices for accelerating the convergence. We then prove that the proposed reconstruction strategy converges to the original graph signal. The simulation results demonstrate the effectiveness of the proposed reconstruction strategy with various downsampling patterns, fluctuation of graph cut-off frequency, robustness on the classic graph structures, and noisy scenarios.
Generation of graph-state streams
Ballester, Daniel; Cho, Jaeyoon; Kim, M. S.
2011-01-15
We propose a protocol to generate a stream of mobile qubits in a graph state through a single stationary parent qubit and discuss two types of its physical implementation, namely, the generation of photonic graph states through an atomlike qubit and the generation of flying atoms through a cavity-mode photonic qubit. The generated graph states fall into an important class that can hugely reduce the resource requirement of fault-tolerant linear optics quantum computation, which was previously known to be far from realistic. In regard to the flying atoms, we also propose a heralded generation scheme, which allows for high-fidelity graph states even under the photon loss.
Analysis of the contact graph routing algorithm: Bounding interplanetary paths
NASA Astrophysics Data System (ADS)
Birrane, Edward; Burleigh, Scott; Kasch, Niels
2012-06-01
Interplanetary communication networks comprise orbiters, deep-space relays, and stations on planetary surfaces. These networks must overcome node mobility, constrained resources, and significant propagation delays. Opportunities for wireless contact rely on calculating transmit and receive opportunities, but the Euclidean-distance diameter of these networks (measured in light-seconds and light-minutes) precludes node discovery and contact negotiation. Propagation delay may be larger than the line-of-sight contact between nodes. For example, Mars and Earth orbiters may be separated by up to 20.8 min of signal propagation time. Such spacecraft may never share line-of-sight, but may uni-directionally communicate if one orbiter knows the other's future position. The Contact Graph Routing (CGR) approach is a family of algorithms presented to solve the messaging problem of interplanetary communications. These algorithms exploit networks where nodes exhibit deterministic mobility. For CGR, mobility and bandwidth information is pre-configured throughout the network allowing nodes to construct transmit opportunities. Once constructed, routing algorithms operate on this contact graph to build an efficient path through the network. The interpretation of the contact graph, and the construction of a bounded approximate path, is critically important for adoption in operational systems. Brute force approaches, while effective in small networks, are computationally expensive and will not scale. Methods of inferring cycles or other librations within the graph are difficult to detect and will guide the practical implementation of any routing algorithm. This paper presents a mathematical analysis of a multi-destination contact graph algorithm (MD-CGR), demonstrates that it is NP-complete, and proposes realistic constraints that make the problem solvable in polynomial time, as is the case with the originally proposed CGR algorithm. An analysis of path construction to complement hop
Smalter, Aaron; Huan, Jun Luke; Jia, Yi; Lushington, Gerald
2010-01-01
Graph data mining is an active research area. Graphs are general modeling tools to organize information from heterogeneous sources and have been applied in many scientific, engineering, and business fields. With the fast accumulation of graph data, building highly accurate predictive models for graph data emerges as a new challenge that has not been fully explored in the data mining community. In this paper, we demonstrate a novel technique called graph pattern diffusion (GPD) kernel. Our idea is to leverage existing frequent pattern discovery methods and to explore the application of kernel classifier (e.g., support vector machine) in building highly accurate graph classification. In our method, we first identify all frequent patterns from a graph database. We then map subgraphs to graphs in the graph database and use a process we call "pattern diffusion" to label nodes in the graphs. Finally, we designed a graph alignment algorithm to compute the inner product of two graphs. We have tested our algorithm using a number of chemical structure data. The experimental results demonstrate that our method is significantly better than competing methods such as those kernel functions based on paths, cycles, and subgraphs.
ERIC Educational Resources Information Center
Xi, Xiaoming
2010-01-01
Motivated by cognitive theories of graph comprehension, this study systematically manipulated characteristics of a line graph description task in a speaking test in ways to mitigate the influence of graph familiarity, a potential source of construct-irrelevant variance. It extends Xi (2005), which found that the differences in holistic scores on…
Clique percolation in random graphs
NASA Astrophysics Data System (ADS)
Li, Ming; Deng, Youjin; Wang, Bing-Hong
2015-10-01
As a generation of the classical percolation, clique percolation focuses on the connection of cliques in a graph, where the connection of two k cliques means that they share at least l
Clique percolation in random graphs.
Li, Ming; Deng, Youjin; Wang, Bing-Hong
2015-10-01
As a generation of the classical percolation, clique percolation focuses on the connection of cliques in a graph, where the connection of two k cliques means that they share at least l
Feature Tracking Using Reeb Graphs
Weber, Gunther H.; Bremer, Peer-Timo; Day, Marcus S.; Bell, John B.; Pascucci, Valerio
2010-08-02
Tracking features and exploring their temporal dynamics can aid scientists in identifying interesting time intervals in a simulation and serve as basis for performing quantitative analyses of temporal phenomena. In this paper, we develop a novel approach for tracking subsets of isosurfaces, such as burning regions in simulated flames, which are defined as areas of high fuel consumption on a temperature isosurface. Tracking such regions as they merge and split over time can provide important insights into the impact of turbulence on the combustion process. However, the convoluted nature of the temperature isosurface and its rapid movement make this analysis particularly challenging. Our approach tracks burning regions by extracting a temperature isovolume from the four-dimensional space-time temperature field. It then obtains isosurfaces for the original simulation time steps and labels individual connected 'burning' regions based on the local fuel consumption value. Based on this information, a boundary surface between burning and non-burning regions is constructed. The Reeb graph of this boundary surface is the tracking graph for burning regions.
Enabling Graph Appliance for Genome Assembly
Singh, Rina; Graves, Jeffrey A; Lee, Sangkeun; Sukumar, Sreenivas R; Shankar, Mallikarjun
2015-01-01
In recent years, there has been a huge growth in the amount of genomic data available as reads generated from various genome sequencers. The number of reads generated can be huge, ranging from hundreds to billions of nucleotide, each varying in size. Assembling such large amounts of data is one of the challenging computational problems for both biomedical and data scientists. Most of the genome assemblers developed have used de Bruijn graph techniques. A de Bruijn graph represents a collection of read sequences by billions of vertices and edges, which require large amounts of memory and computational power to store and process. This is the major drawback to de Bruijn graph assembly. Massively parallel, multi-threaded, shared memory systems can be leveraged to overcome some of these issues. The objective of our research is to investigate the feasibility and scalability issues of de Bruijn graph assembly on Cray s Urika-GD system; Urika-GD is a high performance graph appliance with a large shared memory and massively multithreaded custom processor designed for executing SPARQL queries over large-scale RDF data sets. However, to the best of our knowledge, there is no research on representing a de Bruijn graph as an RDF graph or finding Eulerian paths in RDF graphs using SPARQL for potential genome discovery. In this paper, we address the issues involved in representing a de Bruin graphs as RDF graphs and propose an iterative querying approach for finding Eulerian paths in large RDF graphs. We evaluate the performance of our implementation on real world ebola genome datasets and illustrate how genome assembly can be accomplished with Urika-GD using iterative SPARQL queries.
Feynman graph generation and calculations in the Hopf algebra of Feynman graphs
NASA Astrophysics Data System (ADS)
Borinsky, Michael
2014-12-01
Two programs for the computation of perturbative expansions of quantum field theory amplitudes are provided. feyngen can be used to generate Feynman graphs for Yang-Mills, QED and φk theories. Using dedicated graph theoretic tools feyngen can generate graphs of comparatively high loop orders. feyncop implements the Hopf algebra of those Feynman graphs which incorporates the renormalization procedure necessary to calculate finite results in perturbation theory of the underlying quantum field theory. feyngen is validated by comparison to explicit calculations of zero dimensional quantum field theories and feyncop is validated using a combinatorial identity on the Hopf algebra of graphs.
Generative Graph Prototypes from Information Theory.
Han, Lin; Wilson, Richard C; Hancock, Edwin R
2015-10-01
In this paper we present a method for constructing a generative prototype for a set of graphs by adopting a minimum description length approach. The method is posed in terms of learning a generative supergraph model from which the new samples can be obtained by an appropriate sampling mechanism. We commence by constructing a probability distribution for the occurrence of nodes and edges over the supergraph. We encode the complexity of the supergraph using an approximate Von Neumann entropy. A variant of the EM algorithm is developed to minimize the description length criterion in which the structure of the supergraph and the node correspondences between the sample graphs and the supergraph are treated as missing data. To generate new graphs, we assume that the nodes and edges of graphs arise under independent Bernoulli distributions and sample new graphs according to their node and edge occurrence probabilities. Empirical evaluations on real-world databases demonstrate the practical utility of the proposed algorithm and show the effectiveness of the generative model for the tasks of graph classification, graph clustering and generating new sample graphs.
Graphing as a Problem-Solving Strategy.
ERIC Educational Resources Information Center
Cohen, Donald
1984-01-01
The focus is on how line graphs can be used to approximate solutions to rate problems and to suggest equations that offer exact algebraic solutions to the problem. Four problems requiring progressively greater graphing sophistication are presented plus four exercises. (MNS)
Qualitative Graphing: A Construction in Mathematics.
ERIC Educational Resources Information Center
Narode, Ronald
This document argues that qualitative graphing is an effective introduction to mathematics as a construction for communication of ideas involving quantitative relationships. It is suggested that with little or no prior knowledge of Cartesian coordinates or analytic descriptions of graphs using equations students can successfully grasp concepts of…
Developing Data Graph Comprehension. Third Edition
ERIC Educational Resources Information Center
Curcio, Frances
2010-01-01
Since the dawn of civilization, pictorial representations and symbols have been used to communicate simple statistics. Efficient and effective, they are still used today in the form of pictures and graphs to record and present data. Who can tie their shoes? How many calories are in your favorite food? Make data and graphs relevant and interesting…
A Ring Construction Using Finite Directed Graphs
ERIC Educational Resources Information Center
Bardzell, Michael
2012-01-01
In this paper we discuss an interesting class of noncommutative rings which can be constructed using finite directed graphs. This construction also creates a vector space. These structures provide undergraduate students connections between ring theory and graph theory and, among other things, allow them to see a ring unity element that looks quite…
Pattern Perception and the Comprehension of Graphs.
ERIC Educational Resources Information Center
Pinker, Steven
Three experiments tested the hypothesis that graphs convey information effectively because they can display global trends as geometric patterns that visual systems encode easily. A novel type of graph was invented in which angles/lengths of line segments joined end-to-end represented variables of rainfall and temperature of a set of months. It was…
ON CLUSTERING TECHNIQUES OF CITATION GRAPHS.
ERIC Educational Resources Information Center
CHIEN, R.T.; PREPARATA, F.P.
ONE OF THE PROBLEMS ENCOUNTERED IN CLUSTERING TECHNIQUES AS APPLIED TO DOCUMENT RETRIEVAL SYSTEMS USING BIBLIOGRAPHIC COUPLING DEVICES IS THAT THE COMPUTATIONAL EFFORT REQUIRED GROWS ROUGHLY AS THE SQUARE OF THE COLLECTION SIZE. IN THIS STUDY GRAPH THEORY IS APPLIED TO THIS PROBLEM BY FIRST MAPPING THE CITATION GRAPH OF THE DOCUMENT COLLECTION…
Using a Microcomputer for Graphing Practice.
ERIC Educational Resources Information Center
Beichner, Robert J.
1986-01-01
Describes a laboratory exercise that introduces physics students to graphing. Presents the program format and sample output of a computer simulation of an experiment which tests the effects of sound intensity on the crawling speed of a snail. Provides students with practice in making exponential or logarithmic graphs. (ML)
Teaching Discrete Mathematics with Graphing Calculators.
ERIC Educational Resources Information Center
Masat, Francis E.
Graphing calculator use is often thought of in terms of pre-calculus or continuous topics in mathematics. This paper contains examples and activities that demonstrate useful, interesting, and easy ways to use a graphing calculator with discrete topics. Examples are given for each of the following topics: functions, mathematical induction and…
Cognitive Aids for Guiding Graph Comprehension
ERIC Educational Resources Information Center
Mautone, Patricia D.; Mayer, Richard E.
2007-01-01
This study sought to improve students' comprehension of scientific graphs by adapting scaffolding techniques used to aid text comprehension. In 3 experiments involving 121 female and 88 male college students, some students were shown cognitive aids prior to viewing 4 geography graphs whereas others were not; all students were then asked to write a…
Pattern vectors from algebraic graph theory.
Wilson, Richard C; Hancock, Edwin R; Luo, Bin
2005-07-01
Graph structures have proven computationally cumbersome for pattern analysis. The reason for this is that, before graphs can be converted to pattern vectors, correspondences must be established between the nodes of structures which are potentially of different size. To overcome this problem, in this paper, we turn to the spectral decomposition of the Laplacian matrix. We show how the elements of the spectral matrix for the Laplacian can be used to construct symmetric polynomials that are permutation invariants. The coefficients of these polynomials can be used as graph features which can be encoded in a vectorial manner. We extend this representation to graphs in which there are unary attributes on the nodes and binary attributes on the edges by using the spectral decomposition of a Hermitian property matrix that can be viewed as a complex analogue of the Laplacian. To embed the graphs in a pattern space, we explore whether the vectors of invariants can be embedded in a low-dimensional space using a number of alternative strategies, including principal components analysis (PCA), multidimensional scaling (MDS), and locality preserving projection (LPP). Experimentally, we demonstrate that the embeddings result in well-defined graph clusters. Our experiments with the spectral representation involve both synthetic and real-world data. The experiments with synthetic data demonstrate that the distances between spectral feature vectors can be used to discriminate between graphs on the basis of their structure. The real-world experiments show that the method can be used to locate clusters of graphs.
Universal spectral statistics in quantum graphs.
Gnutzmann, Sven; Altland, Alexander
2004-11-05
We prove that the spectrum of an individual chaotic quantum graph shows universal spectral correlations, as predicted by random-matrix theory. The stability of these correlations with regard to nonuniversal corrections is analyzed in terms of the linear operator governing the classical dynamics on the graph.
Computerized scoring and graphing of the Farnsworth-Munsell 100-hue color vision test.
Lugo, M; Tiedeman, J S
1986-04-15
The Farnsworth-Munsell 100-hue test is a sensitive and accurate test of color discrimination. A major disadvantage of the test is the laborious and time-consuming calculation needed to score the results and plot them on a chart for interpretation. We present a computer program, written in Microsoft's BASIC language, that performs the calculation and reports both the individual color cap error scores (from which the graph is plotted) and the total error score. If used with an IBM personal computer (or compatible) capable of graphics, the program plots a graph in a modified polar coordinate format that can be printed on a dot-matrix printer.
Sequential motif profile of natural visibility graphs
NASA Astrophysics Data System (ADS)
Iacovacci, Jacopo; Lacasa, Lucas
2016-11-01
The concept of sequential visibility graph motifs—subgraphs appearing with characteristic frequencies in the visibility graphs associated to time series—has been advanced recently along with a theoretical framework to compute analytically the motif profiles associated to horizontal visibility graphs (HVGs). Here we develop a theory to compute the profile of sequential visibility graph motifs in the context of natural visibility graphs (VGs). This theory gives exact results for deterministic aperiodic processes with a smooth invariant density or stochastic processes that fulfill the Markov property and have a continuous marginal distribution. The framework also allows for a linear time numerical estimation in the case of empirical time series. A comparison between the HVG and the VG case (including evaluation of their robustness for short series polluted with measurement noise) is also presented.
Vortices and superfields on a graph
NASA Astrophysics Data System (ADS)
Kan, Nahomi; Kobayashi, Koichiro; Shiraishi, Kiyoshi
2009-08-01
We extend the dimensional deconstruction by utilizing the knowledge of graph theory. In the dimensional deconstruction, one uses the moose diagram to exhibit the structure of the “theory space.” We generalize the moose diagram to a general graph with oriented edges. In the present paper, we consider only the U(1) gauge symmetry. We also introduce supersymmetry into our model by use of superfields. We suppose that vector superfields reside at the vertices and chiral superfields at the edges of a given graph. Then we can consider multivector, multi-Higgs models. In our model, [U(1)]p (where p is the number of vertices) is broken to a single U(1). Therefore, for specific graphs, we get vortexlike classical solutions in our model. We show some examples of the graphs admitting the vortex solutions of simple structure as the Bogomolnyi solution.
Vortices and superfields on a graph
Kan, Nahomi; Kobayashi, Koichiro; Shiraishi, Kiyoshi
2009-08-15
We extend the dimensional deconstruction by utilizing the knowledge of graph theory. In the dimensional deconstruction, one uses the moose diagram to exhibit the structure of the 'theory space'. We generalize the moose diagram to a general graph with oriented edges. In the present paper, we consider only the U(1) gauge symmetry. We also introduce supersymmetry into our model by use of superfields. We suppose that vector superfields reside at the vertices and chiral superfields at the edges of a given graph. Then we can consider multivector, multi-Higgs models. In our model, [U(1)]{sup p} (where p is the number of vertices) is broken to a single U(1). Therefore, for specific graphs, we get vortexlike classical solutions in our model. We show some examples of the graphs admitting the vortex solutions of simple structure as the Bogomolnyi solution.
Graph Mining Meets the Semantic Web
Lee, Sangkeun; Sukumar, Sreenivas R; Lim, Seung-Hwan
2015-01-01
The Resource Description Framework (RDF) and SPARQL Protocol and RDF Query Language (SPARQL) were introduced about a decade ago to enable flexible schema-free data interchange on the Semantic Web. Today, data scientists use the framework as a scalable graph representation for integrating, querying, exploring and analyzing data sets hosted at different sources. With increasing adoption, the need for graph mining capabilities for the Semantic Web has emerged. We address that need through implementation of three popular iterative Graph Mining algorithms (Triangle count, Connected component analysis, and PageRank). We implement these algorithms as SPARQL queries, wrapped within Python scripts. We evaluate the performance of our implementation on 6 real world data sets and show graph mining algorithms (that have a linear-algebra formulation) can indeed be unleashed on data represented as RDF graphs using the SPARQL query interface.
Quantum graphs and random-matrix theory
NASA Astrophysics Data System (ADS)
Pluhař, Z.; Weidenmüller, H. A.
2015-07-01
For simple connected graphs with incommensurate bond lengths and with unitary symmetry we prove the Bohigas-Giannoni-Schmit (BGS) conjecture in its most general form. Using supersymmetry and taking the limit of infinite graph size, we show that the generating function for every (P,Q) correlation function for both closed and open graphs coincides with the corresponding expression of random-matrix theory. We show that the classical Perron-Frobenius operator is bistochastic and possesses a single eigenvalue +1. In the quantum case that implies the existence of a zero (or massless) mode of the effective action. That mode causes universal fluctuation properties. Avoiding the saddle-point approximation we show that for graphs that are classically mixing (i.e. for which the spectrum of the classical Perron-Frobenius operator possesses a finite gap) and that do not carry a special class of bound states, the zero mode dominates in the limit of infinite graph size.
GraphReduce: Processing Large-Scale Graphs on Accelerator-Based Systems
Sengupta, Dipanjan; Song, Shuaiwen; Agarwal, Kapil; Schwan, Karsten
2015-11-15
Recent work on real-world graph analytics has sought to leverage the massive amount of parallelism offered by GPU devices, but challenges remain due to the inherent irregularity of graph algorithms and limitations in GPU-resident memory for storing large graphs. We present GraphReduce, a highly efficient and scalable GPU-based framework that operates on graphs that exceed the device’s internal memory capacity. GraphReduce adopts a combination of edge- and vertex-centric implementations of the Gather-Apply-Scatter programming model and operates on multiple asynchronous GPU streams to fully exploit the high degrees of parallelism in GPUs with efficient graph data movement between the host and device.
GraphReduce: Large-Scale Graph Analytics on Accelerator-Based HPC Systems
Sengupta, Dipanjan; Agarwal, Kapil; Song, Shuaiwen; Schwan, Karsten
2015-09-30
Recent work on real-world graph analytics has sought to leverage the massive amount of parallelism offered by GPU devices, but challenges remain due to the inherent irregularity of graph algorithms and limitations in GPU-resident memory for storing large graphs. We present GraphReduce, a highly efficient and scalable GPU-based framework that operates on graphs that exceed the device’s internal memory capacity. GraphReduce adopts a combination of both edge- and vertex-centric implementations of the Gather-Apply-Scatter programming model and operates on multiple asynchronous GPU streams to fully exploit the high degrees of parallelism in GPUs with efficient graph data movement between the host and the device.
Assessing Students' Metacognitive Skills
Alman, Martha; Gardner, Stephanie; Born, Charles
2007-01-01
Objective To develop a diagnostic test for assessing cognitive skills related to metacognition in a physiology course. Methods Cognitive skills believed to be related to metacognition (visualizing lecture information and interpreting diagrams) were identified in a first-professional year (P1) physiology course and test items were constructed for each. Analyses included overall reliability, item discrimination, and variance comparisons of 4 groups to assess the effect of prior physiology coursework and diagnostic test score level on the first examination in physiology. Results Overall reliability was 0.83 (N = 78). Eighty percent of the test items discriminated positively. The average diagnostic test scores of students with or without a prior physiology course did not differ significantly. Students who scored above the class mean on the diagnostic test and who had taken a prior physiology course also had the highest average scores on the physiology examination. Conclusion The diagnostic test provided a measure of a limited number of skills related to metacognition, and preliminary data suggest that such skills are especially important in retaining information. PMID:17429514
An In-Service Model for Training Teachers to Interpret Tests to Parents.
ERIC Educational Resources Information Center
Dougherty, A. Michael
1979-01-01
Presents a two-session in-service program for teachers and suggests how counselors can emphasize human relations training and test interpretation skills for teachers. First, teachers review human relation skills as they apply to interpreting tests to parents. The other session is an elaboration of procedure for interpreting test profiles.…
Relativity on rotated graph paper
NASA Astrophysics Data System (ADS)
Salgado, Roberto B.
2016-05-01
We demonstrate a method for constructing spacetime diagrams for special relativity on graph paper that has been rotated by 45°. The diagonal grid lines represent light-flash worldlines in Minkowski spacetime, and the boxes in the grid (called "clock diamonds") represent units of measurement corresponding to the ticks of an inertial observer's light clock. We show that many quantitative results can be read off a spacetime diagram simply by counting boxes, with very little algebra. In particular, we show that the squared interval between two events is equal to the signed area of the parallelogram on the grid (called the "causal diamond") with opposite vertices corresponding to those events. We use the Doppler effect—without explicit use of the Doppler formula—to motivate the method.
Join-Graph Propagation Algorithms
Mateescu, Robert; Kask, Kalev; Gogate, Vibhav; Dechter, Rina
2010-01-01
The paper investigates parameterized approximate message-passing schemes that are based on bounded inference and are inspired by Pearl's belief propagation algorithm (BP). We start with the bounded inference mini-clustering algorithm and then move to the iterative scheme called Iterative Join-Graph Propagation (IJGP), that combines both iteration and bounded inference. Algorithm IJGP belongs to the class of Generalized Belief Propagation algorithms, a framework that allowed connections with approximate algorithms from statistical physics and is shown empirically to surpass the performance of mini-clustering and belief propagation, as well as a number of other state-of-the-art algorithms on several classes of networks. We also provide insight into the accuracy of iterative BP and IJGP by relating these algorithms to well known classes of constraint propagation schemes. PMID:20740057
Degree distribution and assortativity in line graphs of complex networks
NASA Astrophysics Data System (ADS)
Wang, Xiangrong; Trajanovski, Stojan; Kooij, Robert E.; Van Mieghem, Piet
2016-03-01
Topological characteristics of links of complex networks influence the dynamical processes executed on networks triggered by links, such as cascading failures triggered by links in power grids and epidemic spread due to link infection. The line graph transforms links in the original graph into nodes. In this paper, we investigate how graph metrics in the original graph are mapped into those for its line graph. In particular, we study the degree distribution and the assortativity of a graph and its line graph. Specifically, we show, both analytically and numerically, the degree distribution of the line graph of an Erdős-Rényi graph follows the same distribution as its original graph. We derive a formula for the assortativity of line graphs and indicate that the assortativity of a line graph is not linearly related to its original graph. Additionally, line graphs of various graphs, e.g. Erdős-Rényi graphs, scale-free graphs, show positive assortativity. In contrast, we find certain types of trees and non-trees whose line graphs have negative assortativity.
Lamplighter groups, de Brujin graphs, spider-web graphs and their spectra
NASA Astrophysics Data System (ADS)
Grigorchuk, R.; Leemann, P.-H.; Nagnibeda, T.
2016-05-01
We study the infinite family of spider-web graphs \\{{{ S }}k,N,M\\}, k≥slant 2, N≥slant 0 and M≥slant 1, initiated in the 50s in the context of network theory. It was later shown in physical literature that these graphs have remarkable percolation and spectral properties. We provide a mathematical explanation of these properties by putting the spider-web graphs in the context of group theory and algebraic graph theory. Namely, we realize them as tensor products of the well-known de Bruijn graphs \\{{{ B }}k,N\\} with cyclic graphs \\{{C}M\\} and show that these graphs are described by the action of the lamplighter group {{ L }}k={Z}/k{Z}\\wr {Z} on the infinite binary tree. Our main result is the identification of the infinite limit of \\{{{ S }}k,N,M\\}, as N,M\\to ∞ , with the Cayley graph of the lamplighter group {{ L }}k which, in turn, is one of the famous Diestel-Leader graphs {{DL}}k,k. As an application we compute the spectra of all spider-web graphs and show their convergence to the discrete spectral distribution associated with the Laplacian on the lamplighter group.
Graph-Based Object Class Discovery
NASA Astrophysics Data System (ADS)
Xia, Shengping; Hancock, Edwin R.
We are interested in the problem of discovering the set of object classes present in a database of images using a weakly supervised graph-based framework. Rather than making use of the ”Bag-of-Features (BoF)” approach widely used in current work on object recognition, we represent each image by a graph using a group of selected local invariant features. Using local feature matching and iterative Procrustes alignment, we perform graph matching and compute a similarity measure. Borrowing the idea of query expansion , we develop a similarity propagation based graph clustering (SPGC) method. Using this method class specific clusters of the graphs can be obtained. Such a cluster can be generally represented by using a higher level graph model whose vertices are the clustered graphs, and the edge weights are determined by the pairwise similarity measure. Experiments are performed on a dataset, in which the number of images increases from 1 to 50K and the number of objects increases from 1 to over 500. Some objects have been discovered with total recall and a precision 1 in a single cluster.
A Graph Syntax for Processes and Services
NASA Astrophysics Data System (ADS)
Bruni, Roberto; Gadducci, Fabio; Lafuente, Alberto Lluch
We propose a class of hierarchical graphs equipped with a simple algebraic syntax as a convenient way to describe configurations in languages with inherently hierarchical features such as sessions, fault- handling scopes or transactions. The graph syntax can be seen as an intermediate representation language, that facilitates the encoding of structured specifications and, in particular, of process calculi, since it provides primitives for nesting, name restriction and parallel composition. The syntax is based on an algebraic presentation that faithfully characterises families of hierarchical graphs, meaning that each term of the language uniquely identifies an equivalence class of graphs (modulo graph isomorphism). Proving soundness and completeness of an encoding (i.e. proving that structurally equivalent processes are mapped to isomorphic graphs) is then facilitated and can be done by structural induction. Summing up, the graph syntax facilitates the definition of faithful encodings, yet allowing a precise visual representation. We illustrate our work with an application to a workflow language and a service-oriented calculus.
Pathfinder: Visual Analysis of Paths in Graphs
Partl, C.; Gratzl, S.; Streit, M.; Wassermann, A. M.; Pfister, H.; Schmalstieg, D.; Lex, A.
2016-01-01
The analysis of paths in graphs is highly relevant in many domains. Typically, path-related tasks are performed in node-link layouts. Unfortunately, graph layouts often do not scale to the size of many real world networks. Also, many networks are multivariate, i.e., contain rich attribute sets associated with the nodes and edges. These attributes are often critical in judging paths, but directly visualizing attributes in a graph layout exacerbates the scalability problem. In this paper, we present visual analysis solutions dedicated to path-related tasks in large and highly multivariate graphs. We show that by focusing on paths, we can address the scalability problem of multivariate graph visualization, equipping analysts with a powerful tool to explore large graphs. We introduce Pathfinder (Figure 1), a technique that provides visual methods to query paths, while considering various constraints. The resulting set of paths is visualized in both a ranked list and as a node-link diagram. For the paths in the list, we display rich attribute data associated with nodes and edges, and the node-link diagram provides topological context. The paths can be ranked based on topological properties, such as path length or average node degree, and scores derived from attribute data. Pathfinder is designed to scale to graphs with tens of thousands of nodes and edges by employing strategies such as incremental query results. We demonstrate Pathfinder's fitness for use in scenarios with data from a coauthor network and biological pathways. PMID:27942090
Object Discovery: Soft Attributed Graph Mining.
Zhang, Quanshi; Song, Xuan; Shao, Xiaowei; Zhao, Huijing; Shibasaki, Ryosuke
2016-03-01
We categorize this research in terms of its contribution to both graph theory and computer vision. From the theoretical perspective, this study can be considered as the first attempt to formulate the idea of mining maximal frequent subgraphs in the challenging domain of messy visual data, and as a conceptual extension to the unsupervised learning of graph matching. We define a soft attributed pattern (SAP) to represent the common subgraph pattern among a set of attributed relational graphs (ARGs), considering both their structure and attributes. Regarding the differences between ARGs with fuzzy attributes and conventional labeled graphs, we propose a new mining strategy that directly extracts the SAP with the maximal graph size without applying node enumeration. Given an initial graph template and a number of ARGs, we develop an unsupervised method to modify the graph template into the maximal-size SAP. From a practical perspective, this research develops a general platform for learning the category model (i.e., the SAP) from cluttered visual data (i.e., the ARGs) without labeling "what is where," thereby opening the possibility for a series of applications in the era of big visual data. Experiments demonstrate the superior performance of the proposed method on RGB/RGB-D images and videos.
Sketch Matching on Topology Product Graph.
Liang, Shuang; Luo, Jun; Liu, Wenyin; Wei, Yichen
2015-08-01
Sketch matching is the fundamental problem in sketch based interfaces. After years of study, it remains challenging when there exists large irregularity and variations in the hand drawn sketch shapes. While most existing works exploit topology relations and graph representations for this problem, they are usually limited by the coarse topology exploration and heuristic (thus suboptimal) similarity metrics between graphs. We present a new sketch matching method with two novel contributions. We introduce a comprehensive definition of topology relations, which results in a rich and informative graph representation of sketches. For graph matching, we propose topology product graph that retains the full correspondence for matching two graphs. Based on it, we derive an intuitive sketch similarity metric whose exact solution is easy to compute. In addition, the graph representation and new metric naturally support partial matching, an important practical problem that received less attention in the literature. Extensive experimental results on a real challenging dataset and the superior performance of our method show that it outperforms the state-of-the-art.
A Review of Big Graph Mining Research
NASA Astrophysics Data System (ADS)
Atastina, I.; Sitohang, B.; Saptawati, G. A. P.; Moertini, V. S.
2017-03-01
Big Graph Mining” is a continuously developing research that was started in 2009 until now. After 7 years, there are many researches that put this topic as the main concern. However, there is no mapping or summary concerning the important issues and solutions to explain this topic. This paper contains a summary of researches that have been conducted since 2009. The result is grouped based on the algorithms, built system and also preprocess techniques that have been developed. Based on survey, there are 11 algorithms and 6 distributed systems to analyse the Big Graph have been improved. While improved pre-process algorithm only covers: sampling and compression technique. These improving algorithms are usually aimed to frequent sub graphs discovery, whereas slightly those of is aimed to cluster Big Graph, and there is no algorithm to classify Big Graph. As a conclusion of this survey, there is a need for more researches to be conducted to improve a comprehensive Graph Mining System, especially for very big Graph.
Partitioning sparse matrices with eigenvectors of graphs
NASA Technical Reports Server (NTRS)
Pothen, Alex; Simon, Horst D.; Liou, Kang-Pu
1990-01-01
The problem of computing a small vertex separator in a graph arises in the context of computing a good ordering for the parallel factorization of sparse, symmetric matrices. An algebraic approach for computing vertex separators is considered in this paper. It is shown that lower bounds on separator sizes can be obtained in terms of the eigenvalues of the Laplacian matrix associated with a graph. The Laplacian eigenvectors of grid graphs can be computed from Kronecker products involving the eigenvectors of path graphs, and these eigenvectors can be used to compute good separators in grid graphs. A heuristic algorithm is designed to compute a vertex separator in a general graph by first computing an edge separator in the graph from an eigenvector of the Laplacian matrix, and then using a maximum matching in a subgraph to compute the vertex separator. Results on the quality of the separators computed by the spectral algorithm are presented, and these are compared with separators obtained from other algorithms for computing separators. Finally, the time required to compute the Laplacian eigenvector is reported, and the accuracy with which the eigenvector must be computed to obtain good separators is considered. The spectral algorithm has the advantage that it can be implemented on a medium-size multiprocessor in a straightforward manner.
Approximate von Neumann entropy for directed graphs.
Ye, Cheng; Wilson, Richard C; Comin, César H; Costa, Luciano da F; Hancock, Edwin R
2014-05-01
In this paper, we develop an entropy measure for assessing the structural complexity of directed graphs. Although there are many existing alternative measures for quantifying the structural properties of undirected graphs, there are relatively few corresponding measures for directed graphs. To fill this gap in the literature, we explore an alternative technique that is applicable to directed graphs. We commence by using Chung's generalization of the Laplacian of a directed graph to extend the computation of von Neumann entropy from undirected to directed graphs. We provide a simplified form of the entropy which can be expressed in terms of simple node in-degree and out-degree statistics. Moreover, we find approximate forms of the von Neumann entropy that apply to both weakly and strongly directed graphs, and that can be used to characterize network structure. We illustrate the usefulness of these simplified entropy forms defined in this paper on both artificial and real-world data sets, including structures from protein databases and high energy physics theory citation networks.
Massive graph visualization : LDRD final report.
Wylie, Brian Neil; Moreland, Kenneth D.
2007-10-01
Graphs are a vital way of organizing data with complex correlations. A good visualization of a graph can fundamentally change human understanding of the data. Consequently, there is a rich body of work on graph visualization. Although there are many techniques that are effective on small to medium sized graphs (tens of thousands of nodes), there is a void in the research for visualizing massive graphs containing millions of nodes. Sandia is one of the few entities in the world that has the means and motivation to handle data on such a massive scale. For example, homeland security generates graphs from prolific media sources such as television, telephone, and the Internet. The purpose of this project is to provide the groundwork for visualizing such massive graphs. The research provides for two major feature gaps: a parallel, interactive visualization framework and scalable algorithms to make the framework usable to a practical application. Both the frameworks and algorithms are designed to run on distributed parallel computers, which are already available at Sandia. Some features are integrated into the ThreatView{trademark} application and future work will integrate further parallel algorithms.
Enabling Graph Mining in RDF Triplestores using SPARQL for Holistic In-situ Graph Analysis
Lee, Sangkeun; Sukumar, Sreenivas R; Hong, Seokyong; Lim, Seung-Hwan
2016-01-01
The graph analysis is now considered as a promising technique to discover useful knowledge in data with a new perspective. We envi- sion that there are two dimensions of graph analysis: OnLine Graph Analytic Processing (OLGAP) and Graph Mining (GM) where each respectively focuses on subgraph pattern matching and automatic knowledge discovery in graph. Moreover, as these two dimensions aim to complementarily solve complex problems, holistic in-situ graph analysis which covers both OLGAP and GM in a single system is critical for minimizing the burdens of operating multiple graph systems and transferring intermediate result-sets between those systems. Nevertheless, most existing graph analysis systems are only capable of one dimension of graph analysis. In this work, we take an approach to enabling GM capabilities (e.g., PageRank, connected-component analysis, node eccentricity, etc.) in RDF triplestores, which are originally developed to store RDF datasets and provide OLGAP capability. More specifically, to achieve our goal, we implemented six representative graph mining algorithms using SPARQL. The approach allows a wide range of available RDF data sets directly applicable for holistic graph analysis within a system. For validation of our approach, we evaluate performance of our implementations with nine real-world datasets and three different computing environments - a laptop computer, an Amazon EC2 instance, and a shared-memory Cray XMT2 URIKA-GD graph-processing appliance. The experimen- tal results show that our implementation can provide promising and scalable performance for real world graph analysis in all tested environments. The developed software is publicly available in an open-source project that we initiated.
Enabling Graph Mining in RDF Triplestores using SPARQL for Holistic In-situ Graph Analysis
Lee, Sangkeun; Sukumar, Sreenivas R; Hong, Seokyong; ...
2016-01-01
The graph analysis is now considered as a promising technique to discover useful knowledge in data with a new perspective. We envi- sion that there are two dimensions of graph analysis: OnLine Graph Analytic Processing (OLGAP) and Graph Mining (GM) where each respectively focuses on subgraph pattern matching and automatic knowledge discovery in graph. Moreover, as these two dimensions aim to complementarily solve complex problems, holistic in-situ graph analysis which covers both OLGAP and GM in a single system is critical for minimizing the burdens of operating multiple graph systems and transferring intermediate result-sets between those systems. Nevertheless, most existingmore » graph analysis systems are only capable of one dimension of graph analysis. In this work, we take an approach to enabling GM capabilities (e.g., PageRank, connected-component analysis, node eccentricity, etc.) in RDF triplestores, which are originally developed to store RDF datasets and provide OLGAP capability. More specifically, to achieve our goal, we implemented six representative graph mining algorithms using SPARQL. The approach allows a wide range of available RDF data sets directly applicable for holistic graph analysis within a system. For validation of our approach, we evaluate performance of our implementations with nine real-world datasets and three different computing environments - a laptop computer, an Amazon EC2 instance, and a shared-memory Cray XMT2 URIKA-GD graph-processing appliance. The experimen- tal results show that our implementation can provide promising and scalable performance for real world graph analysis in all tested environments. The developed software is publicly available in an open-source project that we initiated.« less
The Turc-Budyko adimensional graphs as a tool for consistency assessment
NASA Astrophysics Data System (ADS)
Andréassian, Vazken; Perrin, Charles; Coron, Laurent; Le Moine, Nicolas
2015-04-01
This poster discusses the Turc-Budyko nondimensional graph, a widely used nondimensional representation relating long-term actual evaporation to precipitation and potential evaporation as a tool for assessing the consistency of catchment water balance. We present examples showing both the classical use of the graph (based on long-term averages, see Andréassian and Perrin, 2012) but also a newer use involving dated annual values, which allows to check the consistency of individual years (see Coron et al., 2015). References Andréassian, V., and C. Perrin (2012), On the ambiguous interpretation of the Turc-Budyko nondimensional graph, Water Resour. Res., 48, W10601, doi:10.1029/2012WR012532. Coron, L., V. Andréassian, C. Perrin & N. Le Moine. 2015. Graphical tools based on Turc-Budyko plots to detect changes in catchment behaviour. Hydrological Sciences Journal, doi: 10.1080/02626667.2014.964245
Yang, Xiaoran; Qi, Jiaheng; Pan, Gang; Zhou, Binbin
2017-01-01
With the explosion of healthcare information, there has been a tremendous amount of heterogeneous textual medical knowledge (TMK), which plays an essential role in healthcare information systems. Existing works for integrating and utilizing the TMK mainly focus on straightforward connections establishment and pay less attention to make computers interpret and retrieve knowledge correctly and quickly. In this paper, we explore a novel model to organize and integrate the TMK into conceptual graphs. We then employ a framework to automatically retrieve knowledge in knowledge graphs with a high precision. In order to perform reasonable inference on knowledge graphs, we propose a contextual inference pruning algorithm to achieve efficient chain inference. Our algorithm achieves a better inference result with precision and recall of 92% and 96%, respectively, which can avoid most of the meaningless inferences. In addition, we implement two prototypes and provide services, and the results show our approach is practical and effective. PMID:28299322
Computing the isoperimetric number of a graph
Golovach, P.A.
1995-01-01
Let G be a finite graph. Denote by {partial_derivative}X, where X {contained_in} VG, the set of edges of the graph G with one end in X and the other end in the set VG{backslash}X. The ratio i(G) = min {vert_bar}{vert_bar}X{vert_bar}/{vert_bar}X{vert_bar}, where the minimum is over all nonempty subsets X of the set VG such that {vert_bar}X{vert_bar} {le} {vert_bar} VG {vert_bar}/2, is called the isoperimetric number of the graph G. It is easy to see that the isoperimetric number may be used as a {open_quotes}measure of connectivity{close_quotes} of the graph. The problem of determining the isoperimetric number is clearly linked with graph partition problems, which often arise in various applications. The isoperimetric number is also important for studying Riemann surfaces. These and other applications of the isoperimetric number justify the analysis of graphs of this kind. The properties of the isoperimetric number are presented in more detail elsewhere. It is shown elsewhere that the computation of the isoperimetric number is an NP-hard problem for graphs with multiple edges. We will show that the decision problem {open_quotes}given the graph G and two integers s and t decide if i(G) {le} s/t{close_quotes} is NP-complete even for simple graphs with vertex degrees not exceeding 3. Note that the isoperimetric number of a tree can be computed by a known polynomial-time algorithm.
A First-Year Course That Teaches Research Skills
ERIC Educational Resources Information Center
Czarneski, Debra
2013-01-01
In the Fall semester of 2009, I taught a first-year course that focused on skills required to successfully complete undergraduate research. This paper will discuss the Simpson College first-year course requirements, my course goals, the graph theory topics covered, student feedback, and instructor reflection.
Reaction to Indispensable Manual Calculation Skills in a CAS Environment.
ERIC Educational Resources Information Center
Monaghan, John
2001-01-01
Reacts to an article published in a previous issue of this journal on the effects of graphing calculators and computer algebra systems (CAS) on students' manual calculation and algebraic manipulation skills. Considers the contribution made by Jean-Baptiste Lagrange to thinking about the role of CAS in teaching algebra. (ASK)
Strategic leadership: the essential skills.
Schoemaker, Paul J H; Krupp, Steve; Howland, Samantha
2013-01-01
The more uncertain your environment, the greater the opportunity--if you have the leadership skills to capitalize on it. Research at the Wharton school and at the authors' consulting firm, involving more than 20,000 executives to date, has identified six skills that, when mastered and used in concert, allow leaders to think strategically and navigate the unknown effectively. They are the abilities to anticipate, challenge, interpret, decide, align, and learn. This article describes the six skills in detail and includes a self-assessment that will enable you to identify the ones that most need your attention. The authors have found that strength in one skill cannot easily compensate for a deficit in another. An adaptive strategic leader has learned to apply all six at once.
The MultiThreaded Graph Library (MTGL)
Berry, Jonathan; Leung, Vitus; McLendon, III, William; & Madduri, Kamesh
2008-07-17
The MultiThreaded Graph Library (MTGL) is a set of header files that implement graph algorithm in such a way that they can run on massively multithreaded architectures. It is based upon the Boost Graph Library, but doesnÃÂÃÂ¢ÃÂÃÂÃÂÃÂt use Boost since the latter doesnÃÂÃÂ¢ÃÂÃÂÃÂÃÂt run well on these architectures.
Identifying Codes on Directed De Bruijn Graphs
2014-12-19
ar X iv :1 41 2. 58 42 v1 [ m at h. C O ] 1 8 D ec 2 01 4 Identifying Codes on Directed De Bruijn Graphs Debra Boutin ∗ Department of...Mathematics Hamilton College Victoria Horan † Air Force Research Laboratory Information Directorate December 19, 2014 Abstract For a directed graph G, a t...length at most t is both non-empty and unique. A graph is called t-identifiable if there exists a t-identifying code. This paper shows that the de
A heterogeneous graph-based recommendation simulator
Yeonchan, Ahn; Sungchan, Park; Lee, Matt Sangkeun; Sang-goo, Lee
2013-01-01
Heterogeneous graph-based recommendation frameworks have flexibility in that they can incorporate various recommendation algorithms and various kinds of information to produce better results. In this demonstration, we present a heterogeneous graph-based recommendation simulator which enables participants to experience the flexibility of a heterogeneous graph-based recommendation method. With our system, participants can simulate various recommendation semantics by expressing the semantics via meaningful paths like User Movie User Movie. The simulator then returns the recommendation results on the fly based on the user-customized semantics using a fast Monte Carlo algorithm.
Identifying Codes on Directed De Bruijn Graphs
2015-08-27
JOURNAL ARTICLE (POST PRINT) 3. DATES COVERED (From - To) JUN 2013 – AUG 2015 4. TITLE AND SUBTITLE IDENTIFYING CODES ON DIRECTED DE BRUIJN GRAPHS 5a...owner. 14. ABSTRACT For a directed graph G, a t-identifying code is a subset S ⊆ V (G) with the property that for each vertex v ∈ V (G) the set of...t-identifying code . This paper shows that the directed de Bruijn graph B(d, n) is t- identifiable for n ≥ 2t−1, and is not t-identifiable for n ≤ 2t
The Total Interval of a Graph.
1988-01-01
definitions for all of these clases . A Husimi tree is a graph for which every block is a clique. A cactus is a graph for which every edge is in at most one...proportion of graphs with n vertices that we can represent with q(n) intervals is at most n-2 and this approaches zero as n gets large . Hence the...representations will have relatively few intervals of small depth and relatively many intervals of large depth. It is nevertheless often useful to restrict
Prime Graph Components of Finite Simple Groups
NASA Astrophysics Data System (ADS)
Kondrat'ev, A. S.
1990-02-01
Let G be a finite group and π(G) the set of prime factors of its order. The prime graph of G is the graph with vertex-set π(G), two vertices p and q being joined by an edge whenever G contains an element of order pq. This article contains an explicit description of the primes in each of the connected components of the prime graphs of the finite simple groups of Lie type of even characteristic. This solves question 9.16 of the Kourovka Notebook. Bibliography: 15 titles.
Finite Frames and Graph Theoretic Uncertainty Principles
NASA Astrophysics Data System (ADS)
Koprowski, Paul J.
The subject of analytical uncertainty principles is an important field within harmonic analysis, quantum physics, and electrical engineering. We explore uncertainty principles in the context of the graph Fourier transform, and we prove additive results analogous to the multiplicative version of the classical uncertainty principle. We establish additive uncertainty principles for finite Parseval frames. Lastly, we examine the feasibility region of simultaneous values of the norms of a graph differential operator acting on a function f ∈ l2(G) and its graph Fourier transform.
Implementation aspects of Graph Neural Networks
NASA Astrophysics Data System (ADS)
Barcz, A.; Szymański, Z.; Jankowski, S.
2013-10-01
This article summarises the results of implementation of a Graph Neural Network classi er. The Graph Neural Network model is a connectionist model, capable of processing various types of structured data, including non- positional and cyclic graphs. In order to operate correctly, the GNN model must implement a transition function being a contraction map, which is assured by imposing a penalty on model weights. This article presents research results concerning the impact of the penalty parameter on the model training process and the practical decisions that were made during the GNN implementation process.
Supporting interactive graph exploration using edge plucking
NASA Astrophysics Data System (ADS)
Wong, Nelson; Carpendale, Sheelagh
2007-01-01
Excessive edge density in graphs can cause serious readability issues, which in turn can make the graphs difficult to understand or even misleading. Recently, we introduced the idea of providing tools that offer interactive edge bending as a method by which edge congestion can be disambiguated. We extend this direction, presenting a new tool, Edge Plucking, which offers new interactive methods to clarify node-edge relationships. Edge Plucking expands the number of situations in which interactive graph exploration tools can be used to address edge congestion.
Line graphs for a multiplex network.
Criado, Regino; Flores, Julio; García Del Amo, Alejandro; Romance, Miguel; Barrena, Eva; Mesa, Juan A
2016-06-01
It is well known that line graphs offer a good summary of the graphs properties, which make them easier to analyze and highlight the desired properties. We extend the concept of line graph to multiplex networks in order to analyze multi-plexed and multi-layered networked systems. As these structures are very rich, different approaches to this notion are required to capture a variety of situations. Some relationships between these approaches are established. Finally, by means of some simulations, the potential utility of this concept is illustrated.
Rapid graph layout using space filling curves.
Muelder, Chris; Ma, Kwan-Liu
2008-01-01
Network data frequently arises in a wide variety of fields, and node-link diagrams are a very natural and intuitive representation of such data. In order for a node-link diagram to be effective, the nodes must be arranged well on the screen. While many graph layout algorithms exist for this purpose, they often have limitations such as high computational complexity or node colocation. This paper proposes a new approach to graph layout through the use of space filling curves which is very fast and guarantees that there will be no nodes that are colocated. The resulting layout is also aesthetic and satisfies several criteria for graph layout effectiveness.
Intelligent Graph Layout Using Many Users' Input.
Yuan, Xiaoru; Che, Limei; Hu, Yifan; Zhang, Xin
2012-12-01
In this paper, we propose a new strategy for graph drawing utilizing layouts of many sub-graphs supplied by a large group of people in a crowd sourcing manner. We developed an algorithm based on Laplacian constrained distance embedding to merge subgraphs submitted by different users, while attempting to maintain the topological information of the individual input layouts. To facilitate collection of layouts from many people, a light-weight interactive system has been designed to enable convenient dynamic viewing, modification and traversing between layouts. Compared with other existing graph layout algorithms, our approach can achieve more aesthetic and meaningful layouts with high user preference.
Integer sequence discovery from small graphs
Hoppe, Travis; Petrone, Anna
2015-01-01
We have exhaustively enumerated all simple, connected graphs of a finite order and have computed a selection of invariants over this set. Integer sequences were constructed from these invariants and checked against the Online Encyclopedia of Integer Sequences (OEIS). 141 new sequences were added and six sequences were extended. From the graph database, we were able to programmatically suggest relationships among the invariants. It will be shown that we can readily visualize any sequence of graphs with a given criteria. The code has been released as an open-source framework for further analysis and the database was constructed to be extensible to invariants not considered in this work. PMID:27034526
Loops in Reeb Graphs of 2-Manifolds
Cole-McLaughlin, K; Edelsbrunner, H; Harer, J; Natarajan, V; Pascucci, V
2003-02-11
Given a Morse function f over a 2-manifold with or without boundary, the Reeb graph is obtained by contracting the connected components of the level sets to points. We prove tight upper and lower bounds on the number of loops in the Reeb graph that depend on the genus, the number of boundary components, and whether or not the 2-manifold is orientable. We also give an algorithm that constructs the Reeb graph in time O(n log n), where n is the number of edges in the triangulation used to represent the 2-manifold and the Morse function.
Loops in Reeb Graphs of 2-Manifolds
Cole-McLaughlin, K; Edelsbrunner, H; Harer, J; Natarajan, V; Pascucci, V
2004-12-16
Given a Morse function f over a 2-manifold with or without boundary, the Reeb graph is obtained by contracting the connected components of the level sets to points. We prove tight upper and lower bounds on the number of loops in the Reeb graph that depend on the genus, the number of boundary components, and whether or not the 2-manifold is orientable. We also give an algorithm that constructs the Reeb graph in time O(n log n), where n is the number of edges in the triangulation used to represent the 2-manifold and the Morse function.
Motif-based embedding for graph clustering
NASA Astrophysics Data System (ADS)
Lim, Sungsu; Lee, Jae-Gil
2016-12-01
Community detection in complex networks is a fundamental problem that has been extensively studied owing to its wide range of applications. However, because community detection methods typically rely on the relations between vertices in networks, they may fail to discover higher-order graph substructures, called the network motifs. In this paper, we propose a novel embedding method for graph clustering that considers higher-order relationships involving multiple vertices. We show that our embedding method, which we call motif-based embedding, is more effective in detecting communities than existing graph embedding methods, spectral embedding and force-directed embedding, both theoretically and experimentally.
NASA Astrophysics Data System (ADS)
Szyjka, Sebastian P.
The purpose of this study was to determine the extent to which six cognitive and attitudinal variables predicted pre-service elementary teachers' performance on line graphing. Predictors included Illinois teacher education basic skills sub-component scores in reading comprehension and mathematics, logical thinking performance scores, as well as measures of attitudes toward science, mathematics and graphing. This study also determined the strength of the relationship between each prospective predictor variable and the line graphing performance variable, as well as the extent to which measures of attitude towards science, mathematics and graphing mediated relationships between scores on mathematics, reading, logical thinking and line graphing. Ninety-four pre-service elementary education teachers enrolled in two different elementary science methods courses during the spring 2009 semester at Southern Illinois University Carbondale participated in this study. Each subject completed five different instruments designed to assess science, mathematics and graphing attitudes as well as logical thinking and graphing ability. Sixty subjects provided copies of primary basic skills score reports that listed subset scores for both reading comprehension and mathematics. The remaining scores were supplied by a faculty member who had access to a database from which the scores were drawn. Seven subjects, whose scores could not be found, were eliminated from final data analysis. Confirmatory factor analysis (CFA) was conducted in order to establish validity and reliability of the Questionnaire of Attitude Toward Line Graphs in Science (QALGS) instrument. CFA tested the statistical hypothesis that the five main factor structures within the Questionnaire of Attitude Toward Statistical Graphs (QASG) would be maintained in the revised QALGS. Stepwise Regression Analysis with backward elimination was conducted in order to generate a parsimonious and precise predictive model. This
ERIC Educational Resources Information Center
Burt, Lorna; And Others
This guide is intended for use in an eight-session course designed to develop the presentation skills required of persons employed in the manufacturing and service industries. The course is structured so that, upon its completion, students will be able to accomplish the following: identify the traits of good and bad speakers; research and organize…
Interpretation and display of research results
Kulkarni, Dilip Kumar
2016-01-01
It important to properly collect, code, clean and edit the data before interpreting and displaying the research results. Computers play a major role in different phases of research starting from conceptual, design and planning, data collection, data analysis and research publication phases. The main objective of data display is to summarize the characteristics of a data and to make the data more comprehensible and meaningful. Usually data is presented depending upon the type of data in different tables and graphs. This will enable not only to understand the data behaviour, but also useful in choosing the different statistical tests to be applied. PMID:27729693
Interpretive Management: What General Managers Can Learn from Design.
ERIC Educational Resources Information Center
Lester, Richard K.; Piore, Michael J.; Malek, Kamal M.
1998-01-01
An analytical management approach reflects a traditional perspective and an interpretive approach involves a perspective suited to rapidly changing, unpredictable markets. Both approaches are valid, but each serves different purposes and calls for different strategies and skills. (JOW)
Survey of Basic Skills: Grade 3. Rationale and Content.
ERIC Educational Resources Information Center
California State Dept. of Education, Sacramento. Office of Program Evaluation and Research.
This publication was developed as a useful tool for school personnel in interpreting California Assessment Program (CAP) test results. The skills measured by the Survey of Basic Skills: Grade 3 (an integral part of the CAP) are described. Rationale for test content specifications, methods of skill assessment, and activities conducted during the…
NASA Astrophysics Data System (ADS)
Shahid, Nauman; Perraudin, Nathanael; Kalofolias, Vassilis; Puy, Gilles; Vandergheynst, Pierre
2016-06-01
Mining useful clusters from high dimensional data has received significant attention of the computer vision and pattern recognition community in the recent years. Linear and non-linear dimensionality reduction has played an important role to overcome the curse of dimensionality. However, often such methods are accompanied with three different problems: high computational complexity (usually associated with the nuclear norm minimization), non-convexity (for matrix factorization methods) and susceptibility to gross corruptions in the data. In this paper we propose a principal component analysis (PCA) based solution that overcomes these three issues and approximates a low-rank recovery method for high dimensional datasets. We target the low-rank recovery by enforcing two types of graph smoothness assumptions, one on the data samples and the other on the features by designing a convex optimization problem. The resulting algorithm is fast, efficient and scalable for huge datasets with O(nlog(n)) computational complexity in the number of data samples. It is also robust to gross corruptions in the dataset as well as to the model parameters. Clustering experiments on 7 benchmark datasets with different types of corruptions and background separation experiments on 3 video datasets show that our proposed model outperforms 10 state-of-the-art dimensionality reduction models. Our theoretical analysis proves that the proposed model is able to recover approximate low-rank representations with a bounded error for clusterable data.
Activities: Relating to Graphs in Introductory Algebra.
ERIC Educational Resources Information Center
Van Dyke, Frances
1994-01-01
Presents activities designed to help students bridge the gap between the graphical representation of a function and a verbal description. Includes a number of nonstandard graphs and reproducible student worksheets. (MKR)
D'Azevedo, Ed F; Imam, Neena
2015-01-01
This document describes the effort to implement the Graph 500 benchmark using OpenSHMEM based on the MPI-2 one-side version. The Graph 500 benchmark performs a breadth-first search in parallel on a large randomly generated undirected graph and can be implemented using basic MPI-1 and MPI-2 one-sided communication. Graph 500 requires atomic bit-wise operations on unsigned long integers but neither atomic bit-wise operations nor OpenSHMEM for unsigned long are available in OpenSHEM. Such needed bit-wise atomic operations and support for unsigned long are implemented using atomic condition swap (CSWAP) on signed long integers. Preliminary results on comparing the OpenSHMEM and MPI-2 one-sided implementations on a Silicon Graphics Incorporated (SGI) cluster and the Cray XK7 are presented.
Logical reasoning necessary to make line graphs
NASA Astrophysics Data System (ADS)
Wavering, Michael J.
A study was conducted to determine the logical reasoning necessary to construct line graphs. Three types of line graphs were used: a straight line with a positive slope, a straight line with a negative slope, and an exponentially increasing curve. The subjects were students in grades six through twelve enrolled in a laboratory school. The responses were classified into one of nine categories. The categories ranged from no attempt to make a graph to a complete graph with a statement of a relationship between the variables. Subjects in grades six through eight exhibited behaviors mainly in the first four categories, ninth- and tenth-grade subjects scored in the middle categories, and eleventh and twelfth graders scored mainly in the upper categories. These response categories also showed a close fit with Piagetian concrete operational structures for single and double seriation and formal operational structures for proportional reasoning and correlational reasoning.
Strong sum distance in fuzzy graphs.
Tom, Mini; Sunitha, Muraleedharan Shetty
2015-01-01
In this paper the idea of strong sum distance which is a metric, in a fuzzy graph is introduced. Based on this metric the concepts of eccentricity, radius, diameter, center and self centered fuzzy graphs are studied. Some properties of eccentric nodes, peripheral nodes and central nodes are obtained. A characterisation of self centered complete fuzzy graph is obtained and conditions under which a fuzzy cycle is self centered are established. We have proved that based on this metric, an eccentric node of a fuzzy tree G is a fuzzy end node of G and a node is an eccentric node of a fuzzy tree if and only if it is a peripheral node of G and the center of a fuzzy tree consists of either one or two neighboring nodes. The concepts of boundary nodes and interior nodes in a fuzzy graph based on strong sum distance are introduced. Some properties of boundary nodes, interior nodes and complete nodes are studied.
Bipartite Graphs of Large Clique-Width
NASA Astrophysics Data System (ADS)
Korpelainen, Nicholas; Lozin, Vadim V.
Recently, several constructions of bipartite graphs of large clique-width have been discovered in the literature. In the present paper, we propose a general framework for developing such constructions and use it to obtain new results on this topic.
Fault-tolerant dynamic task graph scheduling
Kurt, Mehmet C.; Krishnamoorthy, Sriram; Agrawal, Kunal; Agrawal, Gagan
2014-11-16
In this paper, we present an approach to fault tolerant execution of dynamic task graphs scheduled using work stealing. In particular, we focus on selective and localized recovery of tasks in the presence of soft faults. We elicit from the user the basic task graph structure in terms of successor and predecessor relationships. The work stealing-based algorithm to schedule such a task graph is augmented to enable recovery when the data and meta-data associated with a task get corrupted. We use this redundancy, and the knowledge of the task graph structure, to selectively recover from faults with low space and time overheads. We show that the fault tolerant design retains the essential properties of the underlying work stealing-based task scheduling algorithm, and that the fault tolerant execution is asymptotically optimal when task re-execution is taken into account. Experimental evaluation demonstrates the low cost of recovery under various fault scenarios.
Efficient multiple-way graph partitioning algorithms
Dasdan, A.; Aykanat, C.
1995-12-01
Graph partitioning deals with evenly dividing a graph into two or more parts such that the total weight of edges interconnecting these parts, i.e., cutsize, is minimized. Graph partitioning has important applications in VLSI layout, mapping, and sparse Gaussian elimination. Since graph partitioning problem is NP-hard, we should resort to polynomial-time algorithms to obtain a good solution, or hopefully a near-optimal solution. Kernighan-Lin (KL) propsoed a 2-way partitioning algorithms. Fiduccia-Mattheyses (FM) introduced a faster version of KL algorithm. Sanchis (FMS) generalized FM algorithm to a multiple-way partitioning algorithm. Simulated Annealing (SA) is one of the most successful approaches that are not KL-based.
Exploring Hill Ciphers with Graphing Calculators.
ERIC Educational Resources Information Center
St. John, Dennis
1998-01-01
Explains how to code and decode messages using Hill ciphers which combine matrix multiplication and modular arithmetic. Discusses how a graphing calculator can facilitate the matrix and modular arithmetic used in the coding and decoding procedures. (ASK)
Graph Theory and the High School Student.
ERIC Educational Resources Information Center
Chartrand, Gary; Wall, Curtiss E.
1980-01-01
Graph theory is presented as a tool to instruct high school mathematics students. A variety of real world problems can be modeled which help students recognize the importance and difficulty of applying mathematics. (MP)
Bipartite graph partitioning and data clustering
Zha, Hongyuan; He, Xiaofeng; Ding, Chris; Gu, Ming; Simon, Horst D.
2001-05-07
Many data types arising from data mining applications can be modeled as bipartite graphs, examples include terms and documents in a text corpus, customers and purchasing items in market basket analysis and reviewers and movies in a movie recommender system. In this paper, the authors propose a new data clustering method based on partitioning the underlying biopartite graph. The partition is constructed by minimizing a normalized sum of edge weights between unmatched pairs of vertices of the bipartite graph. They show that an approximate solution to the minimization problem can be obtained by computing a partial singular value decomposition (SVD) of the associated edge weight matrix of the bipartite graph. They point out the connection of their clustering algorithm to correspondence analysis used in multivariate analysis. They also briefly discuss the issue of assigning data objects to multiple clusters. In the experimental results, they apply their clustering algorithm to the problem of document clustering to illustrate its effectiveness and efficiency.
Pre-Service Elementary Teachers' Understandings of Graphs
ERIC Educational Resources Information Center
Alacaci, Cengiz; Lewis, Scott; O'Brien, George E.; Jiang, Zhonghong
2011-01-01
Choosing graphs to display quantitative information is a component of "graph sense". An important aspect of pre-service elementary teachers' content knowledge; ability to choose appropriate graphs in applied contexts is investigated in this study. They were given three scenarios followed by four graphs representing the same quantitative data. They…
47 CFR 73.184 - Groundwave field strength graphs.
Code of Federal Regulations, 2014 CFR
2014-10-01
... 47 Telecommunication 4 2014-10-01 2014-10-01 false Groundwave field strength graphs. 73.184... RADIO BROADCAST SERVICES AM Broadcast Stations § 73.184 Groundwave field strength graphs. (a) Graphs 1... graph paper and each is to be used for the range of frequencies shown thereon. Computations are based...
47 CFR 73.184 - Groundwave field strength graphs.
Code of Federal Regulations, 2010 CFR
2010-10-01
... 47 Telecommunication 4 2010-10-01 2010-10-01 false Groundwave field strength graphs. 73.184... RADIO BROADCAST SERVICES AM Broadcast Stations § 73.184 Groundwave field strength graphs. (a) Graphs 1... graph paper and each is to be used for the range of frequencies shown thereon. Computations are based...
47 CFR 73.184 - Groundwave field strength graphs.
Code of Federal Regulations, 2012 CFR
2012-10-01
... 47 Telecommunication 4 2012-10-01 2012-10-01 false Groundwave field strength graphs. 73.184... RADIO BROADCAST SERVICES AM Broadcast Stations § 73.184 Groundwave field strength graphs. (a) Graphs 1... graph paper and each is to be used for the range of frequencies shown thereon. Computations are based...
47 CFR 73.184 - Groundwave field strength graphs.
Code of Federal Regulations, 2013 CFR
2013-10-01
... 47 Telecommunication 4 2013-10-01 2013-10-01 false Groundwave field strength graphs. 73.184... RADIO BROADCAST SERVICES AM Broadcast Stations § 73.184 Groundwave field strength graphs. (a) Graphs 1... graph paper and each is to be used for the range of frequencies shown thereon. Computations are based...
Continuous Time Group Discovery in Dynamic Graphs
Miller, K; Eliassi-Rad, T
2010-11-04
With the rise in availability and importance of graphs and networks, it has become increasingly important to have good models to describe their behavior. While much work has focused on modeling static graphs, we focus on group discovery in dynamic graphs. We adapt a dynamic extension of Latent Dirichlet Allocation to this task and demonstrate good performance on two datasets. Modeling relational data has become increasingly important in recent years. Much work has focused on static graphs - that is fixed graphs at a single point in time. Here we focus on the problem of modeling dynamic (i.e. time-evolving) graphs. We propose a scalable Bayesian approach for community discovery in dynamic graphs. Our approach is based on extensions of Latent Dirichlet Allocation (LDA). LDA is a latent variable model for topic modeling in text corpora. It was extended to deal with topic changes in discrete time and later in continuous time. These models were referred to as the discrete Dynamic Topic Model (dDTM) and the continuous Dynamic Topic Model (cDTM), respectively. When adapting these models to graphs, we take our inspiration from LDA-G and SSN-LDA, applications of LDA to static graphs that have been shown to effectively factor out community structure to explain link patterns in graphs. In this paper, we demonstrate how to adapt and apply the cDTM to the task of finding communities in dynamic networks. We use link prediction to measure the quality of the discovered community structure and apply it to two different relational datasets - DBLP author-keyword and CAIDA autonomous systems relationships. We also discuss a parallel implementation of this approach using Hadoop. In Section 2, we review LDA and LDA-G. In Section 3, we review the cDTM and introduce cDTMG, its adaptation to modeling dynamic graphs. We discuss inference for the cDTM-G and details of our parallel implementation in Section 4 and present its performance on two datasets in Section 5 before concluding in
Cantor spectra of magnetic chain graphs
NASA Astrophysics Data System (ADS)
Exner, Pavel; Vašata, Daniel
2017-04-01
We demonstrate a one-dimensional magnetic system can exhibit a Cantor-type spectrum using an example of a chain graph with δ coupling at the vertices exposed to a magnetic field perpendicular to the graph plane and varying along the chain. If the field grows linearly with an irrational slope, measured in terms of the flux through the loops of the chain, we demonstrate the character of the spectrum relating it to the almost Mathieu operator.
Molecular electrostatic potential as a graph.
Daza, Edgar E; Maza, Julio; Torres, Raul
2013-06-01
We present several procedures to represent molecular electrostatic potential as a graph, based on the pattern of critical points and their neighborhood relations. This representation is used for the molecular electrostatic comparison, which is reduced to a comparison of tree-type graphs. Several methods to compare trees are also presented. The applications of this algorithm to compare and classify molecules through their electrostatic potential are illustrated.
A software tool for dataflow graph scheduling
NASA Technical Reports Server (NTRS)
Jones, Robert L., III
1994-01-01
A graph-theoretic design process and software tool is presented for selecting a multiprocessing scheduling solution for a class of computational problems. The problems of interest are those that can be described using a dataflow graph and are intended to be executed repetitively on multiple processors. The dataflow paradigm is very useful in exposing the parallelism inherent in algorithms. It provides a graphical and mathematical model which describes a partial ordering of algorithm tasks based on data precedence.
Accelerating semantic graph databases on commodity clusters
Morari, Alessandro; Castellana, Vito G.; Haglin, David J.; Feo, John T.; Weaver, Jesse R.; Tumeo, Antonino; Villa, Oreste
2013-10-06
We are developing a full software system for accelerating semantic graph databases on commodity cluster that scales to hundreds of nodes while maintaining constant query throughput. Our framework comprises a SPARQL to C++ compiler, a library of parallel graph methods and a custom multithreaded runtime layer, which provides a Partitioned Global Address Space (PGAS) programming model with fork/join parallelism and automatic load balancing over a commodity clusters. We present preliminary results for the compiler and for the runtime.
Inverse scattering problem for quantum graph vertices
Cheon, Taksu; Turek, Ondrej; Exner, Pavel
2011-06-15
We demonstrate how the inverse scattering problem of a quantum star graph can be solved by means of diagonalization of the Hermitian unitary matrix when the vertex coupling is of the scale-invariant (or Fueloep-Tsutsui) form. This enables the construction of quantum graphs with desired properties in a tailor-made fashion. The procedure is illustrated on the example of quantum vertices with equal transmission probabilities.
Constrained Markovian Dynamics of Random Graphs
NASA Astrophysics Data System (ADS)
Coolen, A. C. C.; de Martino, A.; Annibale, A.
2009-09-01
We introduce a statistical mechanics formalism for the study of constrained graph evolution as a Markovian stochastic process, in analogy with that available for spin systems, deriving its basic properties and highlighting the role of the `mobility' (the number of allowed moves for any given graph). As an application of the general theory we analyze the properties of degree-preserving Markov chains based on elementary edge switchings. We give an exact yet simple formula for the mobility in terms of the graph's adjacency matrix and its spectrum. This formula allows us to define acceptance probabilities for edge switchings, such that the Markov chains become controlled Glauber-type detailed balance processes, designed to evolve to any required invariant measure (representing the asymptotic frequencies with which the allowed graphs are visited during the process). As a corollary we also derive a condition in terms of simple degree statistics, sufficient to guarantee that, in the limit where the number of nodes diverges, even for state-independent acceptance probabilities of proposed moves the invariant measure of the process will be uniform. We test our theory on synthetic graphs and on realistic larger graphs as studied in cellular biology, showing explicitly that, for instances where the simple edge swap dynamics fails to converge to the uniform measure, a suitably modified Markov chain instead generates the correct phase space sampling.
On convex relaxation of graph isomorphism
Aflalo, Yonathan; Bronstein, Alexander; Kimmel, Ron
2015-01-01
We consider the problem of exact and inexact matching of weighted undirected graphs, in which a bijective correspondence is sought to minimize a quadratic weight disagreement. This computationally challenging problem is often relaxed as a convex quadratic program, in which the space of permutations is replaced by the space of doubly stochastic matrices. However, the applicability of such a relaxation is poorly understood. We define a broad class of friendly graphs characterized by an easily verifiable spectral property. We prove that for friendly graphs, the convex relaxation is guaranteed to find the exact isomorphism or certify its inexistence. This result is further extended to approximately isomorphic graphs, for which we develop an explicit bound on the amount of weight disagreement under which the relaxation is guaranteed to find the globally optimal approximate isomorphism. We also show that in many cases, the graph matching problem can be further harmlessly relaxed to a convex quadratic program with only n separable linear equality constraints, which is substantially more efficient than the standard relaxation involving 2n equality and n2 inequality constraints. Finally, we show that our results are still valid for unfriendly graphs if additional information in the form of seeds or attributes is allowed, with the latter satisfying an easy to verify spectral characteristic. PMID:25713342
Graph representation of protein free energy landscape
Li, Minghai; Duan, Mojie; Fan, Jue; Huo, Shuanghong; Han, Li
2013-11-14
The thermodynamics and kinetics of protein folding and protein conformational changes are governed by the underlying free energy landscape. However, the multidimensional nature of the free energy landscape makes it difficult to describe. We propose to use a weighted-graph approach to depict the free energy landscape with the nodes on the graph representing the conformational states and the edge weights reflecting the free energy barriers between the states. Our graph is constructed from a molecular dynamics trajectory and does not involve projecting the multi-dimensional free energy landscape onto a low-dimensional space defined by a few order parameters. The calculation of free energy barriers was based on transition-path theory using the MSMBuilder2 package. We compare our graph with the widely used transition disconnectivity graph (TRDG) which is constructed from the same trajectory and show that our approach gives more accurate description of the free energy landscape than the TRDG approach even though the latter can be organized into a simple tree representation. The weighted-graph is a general approach and can be used on any complex system.
Probabilistic Graph Layout for Uncertain Network Visualization.
Schulz, Christoph; Nocaj, Arlind; Goertler, Jochen; Deussen, Oliver; Brandes, Ulrik; Weiskopf, Daniel
2017-01-01
We present a novel uncertain network visualization technique based on node-link diagrams. Nodes expand spatially in our probabilistic graph layout, depending on the underlying probability distributions of edges. The visualization is created by computing a two-dimensional graph embedding that combines samples from the probabilistic graph. A Monte Carlo process is used to decompose a probabilistic graph into its possible instances and to continue with our graph layout technique. Splatting and edge bundling are used to visualize point clouds and network topology. The results provide insights into probability distributions for the entire network-not only for individual nodes and edges. We validate our approach using three data sets that represent a wide range of network types: synthetic data, protein-protein interactions from the STRING database, and travel times extracted from Google Maps. Our approach reveals general limitations of the force-directed layout and allows the user to recognize that some nodes of the graph are at a specific position just by chance.
Graph representation of protein free energy landscape.
Li, Minghai; Duan, Mojie; Fan, Jue; Han, Li; Huo, Shuanghong
2013-11-14
The thermodynamics and kinetics of protein folding and protein conformational changes are governed by the underlying free energy landscape. However, the multidimensional nature of the free energy landscape makes it difficult to describe. We propose to use a weighted-graph approach to depict the free energy landscape with the nodes on the graph representing the conformational states and the edge weights reflecting the free energy barriers between the states. Our graph is constructed from a molecular dynamics trajectory and does not involve projecting the multi-dimensional free energy landscape onto a low-dimensional space defined by a few order parameters. The calculation of free energy barriers was based on transition-path theory using the MSMBuilder2 package. We compare our graph with the widely used transition disconnectivity graph (TRDG) which is constructed from the same trajectory and show that our approach gives more accurate description of the free energy landscape than the TRDG approach even though the latter can be organized into a simple tree representation. The weighted-graph is a general approach and can be used on any complex system.
A Graph Based Methodology for Temporal Signature Identification from HER.
Wang, Fei; Liu, Chuanren; Wang, Yajuan; Hu, Jianying; Yu, Guoqiang
2015-01-01
Data driven technology is believed to be a promising technique for transforming the current status of healthcare. Electronic Health Records (EHR) is one of the main carriers for conducting the data driven healthcare research, where the goal is to derive insights from healthcare data and utilize such insights to improve the quality of care delivery. Due to the progression nature of human disease, one important aspect for analyzing healthcare data is temporality, which suggests the temporal relationships among different healthcare events and how their values evolve over time. Sequential pattern mining is a popular tool to extract time-invariant patterns from discrete sequences and has been applied in analyzing EHR before. However, due to the complexity of EHR, those approaches usually suffers from the pattern explosion problem, which means that a huge number of patterns will be detected with improper setting of the support threshold. To address this challenge, in this paper, we develop a novel representation, namely the temporal graph, for event sequences like EHR, wherein the nodes are medical events and the edges indicate the temporal relationships among those events in patient EHRs. Based on the temporal graph representation, we further develop an approach for temporal signature identification to identify the most significant and interpretable graph bases as temporal signatures, and the expressing coefficients can be treated as the embeddings of the patients in such temporal signature space. Our temporal signature identification framework is also flexible to incorporate semi-supervised/supervised information. We validate our framework on two real-world tasks. One is predicting the onset risk of heart failure. The other is predicting the risk of heart failure related hospitalization for patients with COPD pre-condition. Our results show that the prediction performance in both tasks can be improved by the proposed approaches.
A Graph Based Methodology for Temporal Signature Identification from EHR
Wang, Fei; Liu, Chuanren; Wang, Yajuan; Hu, Jianying; Yu, Guoqiang
2015-01-01
Data driven technology is believed to be a promising technique for transforming the current status of healthcare. Electronic Health Records (EHR) is one of the main carriers for conducting the data driven healthcare research, where the goal is to derive insights from healthcare data and utilize such insights to improve the quality of care delivery. Due to the progression nature of human disease, one important aspect for analyzing healthcare data is temporality, which suggests the temporal relationships among different healthcare events and how their values evolve over time. Sequential pattern mining is a popular tool to extract time-invariant patterns from discrete sequences and has been applied in analyzing EHR before. However, due to the complexity of EHR, those approaches usually suffers from the pattern explosion problem, which means that a huge number of patterns will be detected with improper setting of the support threshold. To address this challenge, in this paper, we develop a novel representation, namely the temporal graph, for event sequences like EHR, wherein the nodes are medical events and the edges indicate the temporal relationships among those events in patient EHRs. Based on the temporal graph representation, we further develop an approach for temporal signature identification to identify the most significant and interpretable graph bases as temporal signatures, and the expressing coefficients can be treated as the embeddings of the patients in such temporal signature space. Our temporal signature identification framework is also flexible to incorporate semi-supervised/supervised information. We validate our framework on two real-world tasks. One is predicting the onset risk of heart failure. The other is predicting the risk of heart failure related hospitalization for patients with COPD pre-condition. Our results show that the prediction performance in both tasks can be improved by the proposed approaches. PMID:26958267
NASA Technical Reports Server (NTRS)
Shewhart, Mark
1991-01-01
Statistical Process Control (SPC) charts are one of several tools used in quality control. Other tools include flow charts, histograms, cause and effect diagrams, check sheets, Pareto diagrams, graphs, and scatter diagrams. A control chart is simply a graph which indicates process variation over time. The purpose of drawing a control chart is to detect any changes in the process signalled by abnormal points or patterns on the graph. The Artificial Intelligence Support Center (AISC) of the Acquisition Logistics Division has developed a hybrid machine learning expert system prototype which automates the process of constructing and interpreting control charts.
Speculation and Historical Interpretation for Fifth and Sixth Graders.
ERIC Educational Resources Information Center
Schneider, Elizabeth; Gregory, Leslie A.
2000-01-01
Describes a unit for fifth- and sixth-grade students that helps develop critical thinking skills. Explains that students read the book, "Leonardo da Vinci" (Diane Stanley), to develop their historical interpretation skills and demonstrate that there is not just one right answer in history. (CMK)
Preserving Differential Privacy in Degree-Correlation based Graph Generation.
Wang, Yue; Wu, Xintao
2013-08-01
Enabling accurate analysis of social network data while preserving differential privacy has been challenging since graph features such as cluster coefficient often have high sensitivity, which is different from traditional aggregate functions (e.g., count and sum) on tabular data. In this paper, we study the problem of enforcing edge differential privacy in graph generation. The idea is to enforce differential privacy on graph model parameters learned from the original network and then generate the graphs for releasing using the graph model with the private parameters. In particular, we develop a differential privacy preserving graph generator based on the dK-graph generation model. We first derive from the original graph various parameters (i.e., degree correlations) used in the dK-graph model, then enforce edge differential privacy on the learned parameters, and finally use the dK-graph model with the perturbed parameters to generate graphs. For the 2K-graph model, we enforce the edge differential privacy by calibrating noise based on the smooth sensitivity, rather than the global sensitivity. By doing this, we achieve the strict differential privacy guarantee with smaller magnitude noise. We conduct experiments on four real networks and compare the performance of our private dK-graph models with the stochastic Kronecker graph generation model in terms of utility and privacy tradeoff. Empirical evaluations show the developed private dK-graph generation models significantly outperform the approach based on the stochastic Kronecker generation model.
Preserving Differential Privacy in Degree-Correlation based Graph Generation
Wang, Yue; Wu, Xintao
2014-01-01
Enabling accurate analysis of social network data while preserving differential privacy has been challenging since graph features such as cluster coefficient often have high sensitivity, which is different from traditional aggregate functions (e.g., count and sum) on tabular data. In this paper, we study the problem of enforcing edge differential privacy in graph generation. The idea is to enforce differential privacy on graph model parameters learned from the original network and then generate the graphs for releasing using the graph model with the private parameters. In particular, we develop a differential privacy preserving graph generator based on the dK-graph generation model. We first derive from the original graph various parameters (i.e., degree correlations) used in the dK-graph model, then enforce edge differential privacy on the learned parameters, and finally use the dK-graph model with the perturbed parameters to generate graphs. For the 2K-graph model, we enforce the edge differential privacy by calibrating noise based on the smooth sensitivity, rather than the global sensitivity. By doing this, we achieve the strict differential privacy guarantee with smaller magnitude noise. We conduct experiments on four real networks and compare the performance of our private dK-graph models with the stochastic Kronecker graph generation model in terms of utility and privacy tradeoff. Empirical evaluations show the developed private dK-graph generation models significantly outperform the approach based on the stochastic Kronecker generation model. PMID:24723987
Practical skills of the future innovator
NASA Astrophysics Data System (ADS)
Kaurov, Vitaliy
2015-03-01
Physics graduates face and often are disoriented by the complex and turbulent world of startups, incubators, emergent technologies, big data, social network engineering, and so on. In order to build the curricula that foster the skills necessary to navigate this world, we will look at the experiences at the Wolfram Science Summer School that gathers annually international students for already more than a decade. We will look at the examples of projects and see the development of such skills as innovative thinking, data mining, machine learning, cloud technologies, device connectivity and the Internet of things, network analytics, geo-information systems, formalized computable knowledge, and the adjacent applied research skills from graph theory to image processing and beyond. This should give solid ideas to educators who will build standard curricula adapted for innovation and entrepreneurship education.
Face split interpretations in sheet metal design
NASA Astrophysics Data System (ADS)
Vitalii, Vorkov; Dewil, Reginald; Mannaerts, Jef; Vandepitte, Dirk; Duflou, Joost R.
2016-10-01
Most of the modern CAD systems have capabilities to work with sheet metal parts. However, the functionality of these modules is limited to modelling, unfolding and delivering project documentation. In some cases the proposed design cannot be manufactured without splitting one or more faces of the part. In the current work, the graph representation of sheet metal parts and corresponding flat patterns are discussed. A splitting procedure is introduced which keeps all existing connections between faces intact. In addition, three interpretations for splitting are presented and recommendations for possible usage are given. The splitting procedure is found to be a convenient option to create feasible flat patterns. In addition, the different splitting interpretations present more flexibility to the designer.
Labeled Graph Kernel for Behavior Analysis.
Zhao, Ruiqi; Martinez, Aleix M
2016-08-01
Automatic behavior analysis from video is a major topic in many areas of research, including computer vision, multimedia, robotics, biology, cognitive science, social psychology, psychiatry, and linguistics. Two major problems are of interest when analyzing behavior. First, we wish to automatically categorize observed behaviors into a discrete set of classes (i.e., classification). For example, to determine word production from video sequences in sign language. Second, we wish to understand the relevance of each behavioral feature in achieving this classification (i.e., decoding). For instance, to know which behavior variables are used to discriminate between the words apple and onion in American Sign Language (ASL). The present paper proposes to model behavior using a labeled graph, where the nodes define behavioral features and the edges are labels specifying their order (e.g., before, overlaps, start). In this approach, classification reduces to a simple labeled graph matching. Unfortunately, the complexity of labeled graph matching grows exponentially with the number of categories we wish to represent. Here, we derive a graph kernel to quickly and accurately compute this graph similarity. This approach is very general and can be plugged into any kernel-based classifier. Specifically, we derive a Labeled Graph Support Vector Machine (LGSVM) and a Labeled Graph Logistic Regressor (LGLR) that can be readily employed to discriminate between many actions (e.g., sign language concepts). The derived approach can be readily used for decoding too, yielding invaluable information for the understanding of a problem (e.g., to know how to teach a sign language). The derived algorithms allow us to achieve higher accuracy results than those of state-of-the-art algorithms in a fraction of the time. We show experimental results on a variety of problems and datasets, including multimodal data.
Graph optimized Laplacian eigenmaps for face recognition
NASA Astrophysics Data System (ADS)
Dornaika, F.; Assoum, A.; Ruichek, Y.
2015-01-01
In recent years, a variety of nonlinear dimensionality reduction techniques (NLDR) have been proposed in the literature. They aim to address the limitations of traditional techniques such as PCA and classical scaling. Most of these techniques assume that the data of interest lie on an embedded non-linear manifold within the higher-dimensional space. They provide a mapping from the high-dimensional space to the low-dimensional embedding and may be viewed, in the context of machine learning, as a preliminary feature extraction step, after which pattern recognition algorithms are applied. Laplacian Eigenmaps (LE) is a nonlinear graph-based dimensionality reduction method. It has been successfully applied in many practical problems such as face recognition. However the construction of LE graph suffers, similarly to other graph-based DR techniques from the following issues: (1) the neighborhood graph is artificially defined in advance, and thus does not necessary benefit the desired DR task; (2) the graph is built using the nearest neighbor criterion which tends to work poorly due to the high-dimensionality of original space; and (3) its computation depends on two parameters whose values are generally uneasy to assign, the neighborhood size and the heat kernel parameter. To address the above-mentioned problems, for the particular case of the LPP method (a linear version of LE), L. Zhang et al.1 have developed a novel DR algorithm whose idea is to integrate graph construction with specific DR process into a unified framework. This algorithm results in an optimized graph rather than a predefined one.
Labeled Graph Kernel for Behavior Analysis
Zhao, Ruiqi; Martinez, Aleix M.
2016-01-01
Automatic behavior analysis from video is a major topic in many areas of research, including computer vision, multimedia, robotics, biology, cognitive science, social psychology, psychiatry, and linguistics. Two major problems are of interest when analyzing behavior. First, we wish to automatically categorize observed behaviors into a discrete set of classes (i.e., classification). For example, to determine word production from video sequences in sign language. Second, we wish to understand the relevance of each behavioral feature in achieving this classification (i.e., decoding). For instance, to know which behavior variables are used to discriminate between the words apple and onion in American Sign Language (ASL). The present paper proposes to model behavior using a labeled graph, where the nodes define behavioral features and the edges are labels specifying their order (e.g., before, overlaps, start). In this approach, classification reduces to a simple labeled graph matching. Unfortunately, the complexity of labeled graph matching grows exponentially with the number of categories we wish to represent. Here, we derive a graph kernel to quickly and accurately compute this graph similarity. This approach is very general and can be plugged into any kernel-based classifier. Specifically, we derive a Labeled Graph Support Vector Machine (LGSVM) and a Labeled Graph Logistic Regressor (LGLR) that can be readily employed to discriminate between many actions (e.g., sign language concepts). The derived approach can be readily used for decoding too, yielding invaluable information for the understanding of a problem (e.g., to know how to teach a sign language). The derived algorithms allow us to achieve higher accuracy results than those of state-of-the-art algorithms in a fraction of the time. We show experimental results on a variety of problems and datasets, including multimodal data. PMID:26415154
A graph theoretic approach to scene matching
NASA Technical Reports Server (NTRS)
Ranganath, Heggere S.; Chipman, Laure J.
1991-01-01
The ability to match two scenes is a fundamental requirement in a variety of computer vision tasks. A graph theoretic approach to inexact scene matching is presented which is useful in dealing with problems due to imperfect image segmentation. A scene is described by a set of graphs, with nodes representing objects and arcs representing relationships between objects. Each node has a set of values representing the relations between pairs of objects, such as angle, adjacency, or distance. With this method of scene representation, the task in scene matching is to match two sets of graphs. Because of segmentation errors, variations in camera angle, illumination, and other conditions, an exact match between the sets of observed and stored graphs is usually not possible. In the developed approach, the problem is represented as an association graph, in which each node represents a possible mapping of an observed region to a stored object, and each arc represents the compatibility of two mappings. Nodes and arcs have weights indicating the merit or a region-object mapping and the degree of compatibility between two mappings. A match between the two graphs corresponds to a clique, or fully connected subgraph, in the association graph. The task is to find the clique that represents the best match. Fuzzy relaxation is used to update the node weights using the contextual information contained in the arcs and neighboring nodes. This simplifies the evaluation of cliques. A method of handling oversegmentation and undersegmentation problems is also presented. The approach is tested with a set of realistic images which exhibit many types of sementation errors.
GoFFish: A Sub-Graph Centric Framework for Large-Scale Graph Analytics1
Simmhan, Yogesh; Kumbhare, Alok; Wickramaarachchi, Charith; Nagarkar, Soonil; Ravi, Santosh; Raghavendra, Cauligi; Prasanna, Viktor
2014-08-25
Large scale graph processing is a major research area for Big Data exploration. Vertex centric programming models like Pregel are gaining traction due to their simple abstraction that allows for scalable execution on distributed systems naturally. However, there are limitations to this approach which cause vertex centric algorithms to under-perform due to poor compute to communication overhead ratio and slow convergence of iterative superstep. In this paper we introduce GoFFish a scalable sub-graph centric framework co-designed with a distributed persistent graph storage for large scale graph analytics on commodity clusters. We introduce a sub-graph centric programming abstraction that combines the scalability of a vertex centric approach with the flexibility of shared memory sub-graph computation. We map Connected Components, SSSP and PageRank algorithms to this model to illustrate its flexibility. Further, we empirically analyze GoFFish using several real world graphs and demonstrate its significant performance improvement, orders of magnitude in some cases, compared to Apache Giraph, the leading open source vertex centric implementation. We map Connected Components, SSSP and PageRank algorithms to this model to illustrate its flexibility. Further, we empirically analyze GoFFish using several real world graphs and demonstrate its significant performance improvement, orders of magnitude in some cases, compared to Apache Giraph, the leading open source vertex centric implementation.
Basic visual observation skills training course: Appendix A. Final report
Toquam, J.L.; Morris, F.A.; Griggs, J.R.
1995-06-01
The purpose of the basic visual observation skills course is to help safeguards inspectors evaluate and improve their skills in making observations during inspections and in evaluating and interpreting this information. The first 12 hours of the course provide training in five skill areas: perception and recognition; attention to detail; memory; mental imaging, mapping, and modeling skills; and judgment and decision making. Following this training is an integrating exercise involving a simulated safeguards inspection. This report contains the course manual and materials.
Graph-topological approach to magnetic properties of benzenoid hydrocarbons.
Ciesielski, Arkadiusz; Krygowski, Tadeusz M; Cyrański, Michał K; Dobrowolski, Michał A; Aihara, Jun-ichi
2009-12-28
Application of topological properties and graph theory to benzenoid hydrocarbons allowed us to construct an effective approach interpreting ring current formation in molecules when exposed to an external magnetic field. Transformation of unexcited canonical structures for molecules of 34 benzenoid hydrocarbons into circuit structures and then to directed circuit structures allowed us to define global magnetic characteristics (GMC). GMC/n(2) values correlate very well with exaltation of magnetic susceptibility DeltaLambda/n(2) (computed at the CSGT/B3LYP/6-311G** level of theory by using optimized geometries at the B3LYP/6-311G** DFT level) with cc = 0.993. If the approach is applied to individual rings, then the correlation between local magnetic characteristics (LMC) for 129 various rings of 34 benzenoid hydrocarbons and NICS(1) works with cc = -0.975.
Library Technician Skill Standards.
ERIC Educational Resources Information Center
Highline Community Coll., Des Moines, WA.
This document presents skill standards for library technicians. Introductory sections describe the industry and the job, what skill standards are, how the library technician skill standards were developed, employability skills and critical competencies, and the SCANS (Secretary's Commission on Achieving Necessary Skills) foundation skills profile.…
Graph's Topology and Free Energy of a Spin Model on the Graph
NASA Astrophysics Data System (ADS)
Choi, Jeong-Mo; Gilson, Amy I.; Shakhnovich, Eugene I.
2017-02-01
In this Letter we investigate a direct relationship between a graph's topology and the free energy of a spin system on the graph. We develop a method of separating topological and energetic contributions to the free energy, and find that considering the topology is sufficient to qualitatively compare the free energies of different graph systems at high temperature, even when the energetics are not fully known. This method was applied to the metal lattice system with defects, and we found that it partially explains why point defects are more stable than high-dimensional defects. Given the energetics, we can even quantitatively compare free energies of different graph structures via a closed form of linear graph contributions. The closed form is applied to predict the sequence-space free energy of lattice proteins, which is a key factor determining the designability of a protein structure.
Graph mining: procedure, application to drug discovery and recent advances.
Takigawa, Ichigaku; Mamitsuka, Hiroshi
2013-01-01
Combinatorial chemistry has generated chemical libraries and databases with a huge number of chemical compounds, which include prospective drugs. Chemical structures of compounds can be molecular graphs, to which a variety of graph-based techniques in computer science, specifically graph mining, can be applied. The most basic way for analyzing molecular graphs is using structural fragments, so-called subgraphs in graph theory. The mainstream technique in graph mining is frequent subgraph mining, by which we can retrieve essential subgraphs in given molecular graphs. In this article we explain the idea and procedure of mining frequent subgraphs from given molecular graphs, raising some real applications, and we describe the recent advances of graph mining.
Survey of Approaches to Generate Realistic Synthetic Graphs
Lim, Seung-Hwan; Lee, Sangkeun; Powers, Sarah S; Shankar, Mallikarjun; Imam, Neena
2016-10-01
A graph is a flexible data structure that can represent relationships between entities. As with other data analysis tasks, the use of realistic graphs is critical to obtaining valid research results. Unfortunately, using the actual ("real-world") graphs for research and new algorithm development is difficult due to the presence of sensitive information in the data or due to the scale of data. This results in practitioners developing algorithms and systems that employ synthetic graphs instead of real-world graphs. Generating realistic synthetic graphs that provide reliable statistical confidence to algorithmic analysis and system evaluation involves addressing technical hurdles in a broad set of areas. This report surveys the state of the art in approaches to generate realistic graphs that are derived from fitted graph models on real-world graphs.
Modeling Transmission Line Networks Using Quantum Graphs
NASA Astrophysics Data System (ADS)
Koch, Trystan; Antonsen, Thomas
Quantum graphs--one dimensional edges, connecting nodes, that support propagating Schrödinger wavefunctions--have been studied extensively as tractable models of wave chaotic behavior (Smilansky and Gnutzmann 2006, Berkolaiko and Kuchment 2013). Here we consider the electrical analog, in which the graph represents an electrical network where the edges are transmission lines (Hul et. al. 2004) and the nodes contain either discrete circuit elements or intricate circuit elements best represented by arbitrary scattering matrices. Including these extra degrees of freedom at the nodes leads to phenomena that do not arise in simpler graph models. We investigate the properties of eigenfrequencies and eigenfunctions on these graphs, and relate these to the statistical description of voltages on the transmission lines when driving the network externally. The study of electromagnetic compatibility, the effect of external radiation on complicated systems with numerous interconnected cables, motivates our research into this extension of the graph model. Work supported by the Office of Naval Research (N0014130474) and the Air Force Office of Scientific Research.
Linear Time Vertex Partitioning on Massive Graphs.
Mell, Peter; Harang, Richard; Gueye, Assane
The problem of optimally removing a set of vertices from a graph to minimize the size of the largest resultant component is known to be NP-complete. Prior work has provided near optimal heuristics with a high time complexity that function on up to hundreds of nodes and less optimal but faster techniques that function on up to thousands of nodes. In this work, we analyze how to perform vertex partitioning on massive graphs of tens of millions of nodes. We use a previously known and very simple heuristic technique: iteratively removing the node of largest degree and all of its edges. This approach has an apparent quadratic complexity since, upon removal of a node and adjoining set of edges, the node degree calculations must be updated prior to choosing the next node. However, we describe a linear time complexity solution using an array whose indices map to node degree and whose values are hash tables indicating the presence or absence of a node at that degree value. This approach also has a linear growth with respect to memory usage which is surprising since we lowered the time complexity from quadratic to linear. We empirically demonstrate linear scalability and linear memory usage on random graphs of up to 15000 nodes. We then demonstrate tractability on massive graphs through execution on a graph with 34 million nodes representing Internet wide router connectivity.
Towards Scalable Graph Computation on Mobile Devices
Chen, Yiqi; Lin, Zhiyuan; Pienta, Robert; Kahng, Minsuk; Chau, Duen Horng
2015-01-01
Mobile devices have become increasingly central to our everyday activities, due to their portability, multi-touch capabilities, and ever-improving computational power. Such attractive features have spurred research interest in leveraging mobile devices for computation. We explore a novel approach that aims to use a single mobile device to perform scalable graph computation on large graphs that do not fit in the device's limited main memory, opening up the possibility of performing on-device analysis of large datasets, without relying on the cloud. Based on the familiar memory mapping capability provided by today's mobile operating systems, our approach to scale up computation is powerful and intentionally kept simple to maximize its applicability across the iOS and Android platforms. Our experiments demonstrate that an iPad mini can perform fast computation on large real graphs with as many as 272 million edges (Google+ social graph), at a speed that is only a few times slower than a 13″ Macbook Pro. Through creating a real world iOS app with this technique, we demonstrate the strong potential application for scalable graph computation on a single mobile device using our approach. PMID:25859564
Towards Scalable Graph Computation on Mobile Devices.
Chen, Yiqi; Lin, Zhiyuan; Pienta, Robert; Kahng, Minsuk; Chau, Duen Horng
2014-10-01
Mobile devices have become increasingly central to our everyday activities, due to their portability, multi-touch capabilities, and ever-improving computational power. Such attractive features have spurred research interest in leveraging mobile devices for computation. We explore a novel approach that aims to use a single mobile device to perform scalable graph computation on large graphs that do not fit in the device's limited main memory, opening up the possibility of performing on-device analysis of large datasets, without relying on the cloud. Based on the familiar memory mapping capability provided by today's mobile operating systems, our approach to scale up computation is powerful and intentionally kept simple to maximize its applicability across the iOS and Android platforms. Our experiments demonstrate that an iPad mini can perform fast computation on large real graphs with as many as 272 million edges (Google+ social graph), at a speed that is only a few times slower than a 13″ Macbook Pro. Through creating a real world iOS app with this technique, we demonstrate the strong potential application for scalable graph computation on a single mobile device using our approach.
DT-MRI segmentation using graph cuts
NASA Astrophysics Data System (ADS)
Weldeselassie, Yonas T.; Hamarneh, Ghassan
2007-03-01
An important problem in medical image analysis is the segmentation of anatomical regions of interest. Once regions of interest are segmented, one can extract shape, appearance, and structural features that can be analyzed for disease diagnosis or treatment evaluation. Diffusion tensor magnetic resonance imaging (DT-MRI) is a relatively new medical imaging modality that captures unique water diffusion properties and fiber orientation information of the imaged tissues. In this paper, we extend the interactive multidimensional graph cuts segmentation technique to operate on DT-MRI data by utilizing latest advances in tensor calculus and diffusion tensor dissimilarity metrics. The user interactively selects certain tensors as object ("obj") or background ("bkg") to provide hard constraints for the segmentation. Additional soft constraints incorporate information about both regional tissue diffusion as well as boundaries between tissues of different diffusion properties. Graph cuts are used to find globally optimal segmentation of the underlying 3D DT-MR image among all segmentations satisfying the constraints. We develop a graph structure from the underlying DT-MR image with the tensor voxels corresponding to the graph vertices and with graph edge weights computed using either Log-Euclidean or the J-divergence tensor dissimilarity metric. The topology of our segmentation is unrestricted and both obj and bkg segments may consist of several isolated parts. We test our method on synthetic DT data and apply it to real 2D and 3D MRI, providing segmentations of the corpus callosum in the brain and the ventricles of the heart.
Linear Time Vertex Partitioning on Massive Graphs
Mell, Peter; Harang, Richard; Gueye, Assane
2016-01-01
The problem of optimally removing a set of vertices from a graph to minimize the size of the largest resultant component is known to be NP-complete. Prior work has provided near optimal heuristics with a high time complexity that function on up to hundreds of nodes and less optimal but faster techniques that function on up to thousands of nodes. In this work, we analyze how to perform vertex partitioning on massive graphs of tens of millions of nodes. We use a previously known and very simple heuristic technique: iteratively removing the node of largest degree and all of its edges. This approach has an apparent quadratic complexity since, upon removal of a node and adjoining set of edges, the node degree calculations must be updated prior to choosing the next node. However, we describe a linear time complexity solution using an array whose indices map to node degree and whose values are hash tables indicating the presence or absence of a node at that degree value. This approach also has a linear growth with respect to memory usage which is surprising since we lowered the time complexity from quadratic to linear. We empirically demonstrate linear scalability and linear memory usage on random graphs of up to 15000 nodes. We then demonstrate tractability on massive graphs through execution on a graph with 34 million nodes representing Internet wide router connectivity. PMID:27336059
Illinois Occupational Skill Standards: Machining Skills Cluster.
ERIC Educational Resources Information Center
Illinois Occupational Skill Standards and Credentialing Council, Carbondale.
This document of skill standards for the machining skills cluster serves as a guide to workforce preparation program providers in defining content for their programs and to employers to establish the skills and standards necessary for job acquisition. These 67 occupational skill standards describe what people should know and be able to do in an…
Daianu, Madelaine; Mezher, Adam; Jahanshad, Neda; Hibar, Derrek P; Nir, Talia M; Jack, Clifford R; Weiner, Michael W; Bernstein, Matt A; Thompson, Paul M
2015-04-01
Our understanding of network breakdown in Alzheimer's disease (AD) is likely to be enhanced through advanced mathematical descriptors. Here, we applied spectral graph theory to provide novel metrics of structural connectivity based on 3-Tesla diffusion weighted images in 42 AD patients and 50 healthy controls. We reconstructed connectivity networks using whole-brain tractography and examined, for the first time here, cortical disconnection based on the graph energy and spectrum. We further assessed supporting metrics - link density and nodal strength - to better interpret our results. Metrics were analyzed in relation to the well-known APOE-4 genetic risk factor for late-onset AD. The number of disconnected cortical regions increased with the number of copies of the APOE-4 risk gene in people with AD. Each additional copy of the APOE-4 risk gene may lead to more dysfunctional networks with weakened or abnormal connections, providing evidence for the previously hypothesized "disconnection syndrome".
Random Walk Graph Laplacian-Based Smoothness Prior for Soft Decoding of JPEG Images
NASA Astrophysics Data System (ADS)
Liu, Xianming; Cheung, Gene; Wu, Xiaolin; Zhao, Debin
2017-02-01
Given the prevalence of JPEG compressed images, optimizing image reconstruction from the compressed format remains an important problem. Instead of simply reconstructing a pixel block from the centers of indexed DCT coefficient quantization bins (hard decoding), soft decoding reconstructs a block by selecting appropriate coefficient values within the indexed bins with the help of signal priors. The challenge thus lies in how to define suitable priors and apply them effectively. In this paper, we combine three image priors---Laplacian prior for DCT coefficients, sparsity prior and graph-signal smoothness prior for image patches---to construct an efficient JPEG soft decoding algorithm. Specifically, we first use the Laplacian prior to compute a minimum mean square error (MMSE) initial solution for each code block. Next, we show that while the sparsity prior can reduce block artifacts, limiting the size of the over-complete dictionary (to lower computation) would lead to poor recovery of high DCT frequencies. To alleviate this problem, we design a new graph-signal smoothness prior (desired signal has mainly low graph frequencies) based on the left eigenvectors of the random walk graph Laplacian matrix (LERaG). Compared to previous graph-signal smoothness priors, LERaG has desirable image filtering properties with low computation overhead. We demonstrate how LERaG can facilitate recovery of high DCT frequencies of a piecewise smooth (PWS) signal via an interpretation of low graph frequency components as relaxed solutions to normalized cut in spectral clustering. Finally, we construct a soft decoding algorithm using the three signal priors with appropriate prior weights. Experimental results show that our proposal outperforms state-of-the-art soft decoding algorithms in both objective and subjective evaluations noticeably.
Random Walk Graph Laplacian-Based Smoothness Prior for Soft Decoding of JPEG Images.
Liu, Xianming; Cheung, Gene; Wu, Xiaolin; Zhao, Debin
2017-02-01
Given the prevalence of joint photographic experts group (JPEG) compressed images, optimizing image reconstruction from the compressed format remains an important problem. Instead of simply reconstructing a pixel block from the centers of indexed discrete cosine transform (DCT) coefficient quantization bins (hard decoding), soft decoding reconstructs a block by selecting appropriate coefficient values within the indexed bins with the help of signal priors. The challenge thus lies in how to define suitable priors and apply them effectively. In this paper, we combine three image priors-Laplacian prior for DCT coefficients, sparsity prior, and graph-signal smoothness prior for image patches-to construct an efficient JPEG soft decoding algorithm. Specifically, we first use the Laplacian prior to compute a minimum mean square error initial solution for each code block. Next, we show that while the sparsity prior can reduce block artifacts, limiting the size of the overcomplete dictionary (to lower computation) would lead to poor recovery of high DCT frequencies. To alleviate this problem, we design a new graph-signal smoothness prior (desired signal has mainly low graph frequencies) based on the left eigenvectors of the random walk graph Laplacian matrix (LERaG). Compared with the previous graph-signal smoothness priors, LERaG has desirable image filtering properties with low computation overhead. We demonstrate how LERaG can facilitate recovery of high DCT frequencies of a piecewise smooth signal via an interpretation of low graph frequency components as relaxed solutions to normalized cut in spectral clustering. Finally, we construct a soft decoding algorithm using the three signal priors with appropriate prior weights. Experimental results show that our proposal outperforms the state-of-the-art soft decoding algorithms in both objective and subjective evaluations noticeably.
Interpretation reduces ecological impacts of visitors to world heritage site.
Littlefair, Carolyn; Buckley, Ralf
2008-07-01
Minimal-impact interpretation is widely used to reduce the ecological impacts of visitors to protected areas. We tested whether verbal appeals and/or role-model demonstrations of minimal-impact behavior by a trained guide reduced noise, litter, and trampling impacts on hiking trails in a subtropical rainforest. Interpretation did reduce impacts significantly. Different interpretive techniques were more effective for different impacts. The experimental groups were mature, well-educated professionals; interpretation may differ in effectiveness for different visitors. Interpretation by skilled guides can indeed reduce visitor impacts in protected areas, especially if role modeling is combined with verbal appeals.
ERIC Educational Resources Information Center
Hultman, Sven-G.
1987-01-01
Describes some of the interpretive developments underway in Sweden. Discusses some programs in both natural and cultural interpretation. Calls for increasing the purpose and content of heritage preservation and conservation to the general public. (TW)
Recent Developments in Quantitative Graph Theory: Information Inequalities for Networks
Dehmer, Matthias; Sivakumar, Lavanya
2012-01-01
In this article, we tackle a challenging problem in quantitative graph theory. We establish relations between graph entropy measures representing the structural information content of networks. In particular, we prove formal relations between quantitative network measures based on Shannon's entropy to study the relatedness of those measures. In order to establish such information inequalities for graphs, we focus on graph entropy measures based on information functionals. To prove such relations, we use known graph classes whose instances have been proven useful in various scientific areas. Our results extend the foregoing work on information inequalities for graphs. PMID:22355362
Unsupervised spectral mesh segmentation driven by heterogeneous graphs.
Theologou, Panagiotis; Pratikakis, Ioannis; Theoharis, Theoharis
2016-03-21
A fully automatic mesh segmentation scheme using heterogeneous graphs is presented. We introduce a spectral framework where local geometry affinities are coupled with surface patch affinities. A heterogeneous graph is constructed combining two distinct graphs: a weighted graph based on adjacency of patches of an initial over-segmentation, and the weighted dual mesh graph. The partitioning relies on processing each eigenvector of the heterogeneous graph Laplacian individually, taking into account the nodal set and nodal domain theory. Experiments on standard datasets show that the proposed unsupervised approach outperforms the state-of-the-art unsupervised methodologies and is comparable to the best supervised approaches.