Fuel model selection for BEHAVE in midwestern oak savannas

USGS Publications Warehouse

Grabner, K.W.; Dwyer, J.P.; Cutter, B.E.

2001-01-01

BEHAVE, a fire behavior prediction system, can be a useful tool for managing areas with prescribed fire. However, the proper choice of fuel models can be critical in developing management scenarios. BEHAVE predictions were evaluated using four standardized fuel models that partially described oak savanna fuel conditions: Fuel Model 1 (Short Grass), 2 (Timber and Grass), 3 (Tall Grass), and 9 (Hardwood Litter). Although all four models yielded regressions with R2 in excess of 0.8, Fuel Model 2 produced the most reliable fire behavior predictions.

Coexistence of Trees and Grass: Importance of climate and fire within the tropics

NASA Astrophysics Data System (ADS)

Shuman, J. K.; Fisher, R.; Koven, C.; Knox, R. G.; Andre, B.; Kluzek, E. B.

2017-12-01

Tropical forests are characterized by transition zones where dominance shifts between trees and grasses with some areas exhibiting bistability of the two. The cause of this transition and bistability has been linked to the interacting effects of climate, vegetation structure and fire behavior. Utilizing the Functionally Assembled Terrestrial Ecosystem Simulator (FATES), a demographic vegetation model, and the CESM ESM, we explore the coexistence of trees and grass across the tropics with an active fire regime. FATES has been updated to use a fire module based on Spitfire. FATES-Spitfire tracks fire ignition, spread and impact based on fuel state and combustion. Fire occurs within the model with variable intensity that kills trees according to the combined effects of cambial damage and crown scorch due to flame height and fire intensity. As a size-structured model, FATES allows for variable mortality based on the size of tree cohorts, where larger trees experience lower morality compared to small trees. Results for simulation scenarios where vegetation is represented by all trees, all grass, or a combination of competing trees and grass are compared to assess changes in biomass, fire regime and tree-grass coexistence. Within the forest-grass transition area there is a critical time during which grass fuels fire spread and prevents the establishment of trees. If trees are able to escape mortality a tree-grass bistable area is successful. The ability to simulate the bistability and transition of trees and grass throughout the tropics is critical to representing vegetation dynamics in response to changing climate and CO2.

Analyzing rasters, vectors and time series using new Python interfaces in GRASS GIS 7

NASA Astrophysics Data System (ADS)

Petras, Vaclav; Petrasova, Anna; Chemin, Yann; Zambelli, Pietro; Landa, Martin; Gebbert, Sören; Neteler, Markus; Löwe, Peter

2015-04-01

GRASS GIS 7 is a free and open source GIS software developed and used by many scientists (Neteler et al., 2012). While some users of GRASS GIS prefer its graphical user interface, significant part of the scientific community takes advantage of various scripting and programing interfaces offered by GRASS GIS to develop new models and algorithms. Here we will present different interfaces added to GRASS GIS 7 and available in Python, a popular programming language and environment in geosciences. These Python interfaces are designed to satisfy the needs of scientists and programmers under various circumstances. PyGRASS (Zambelli et al., 2013) is a new object-oriented interface to GRASS GIS modules and libraries. The GRASS GIS libraries are implemented in C to ensure maximum performance and the PyGRASS interface provides an intuitive, pythonic access to their functionality. GRASS GIS Python scripting library is another way of accessing GRASS GIS modules. It combines the simplicity of Bash and the efficiency of the Python syntax. When full access to all low-level and advanced functions and structures from GRASS GIS library is required, Python programmers can use an interface based on the Python ctypes package. Ctypes interface provides complete, direct access to all functionality as it would be available to C programmers. GRASS GIS provides specialized Python library for managing and analyzing spatio-temporal data (Gebbert and Pebesma, 2014). The temporal library introduces space time datasets representing time series of raster, 3D raster or vector maps and allows users to combine various spatio-temporal operations including queries, aggregation, sampling or the analysis of spatio-temporal topology. We will also discuss the advantages of implementing scientific algorithm as a GRASS GIS module and we will show how to write such module in Python. To facilitate the development of the module, GRASS GIS provides a Python library for testing (Petras and Gebbert, 2014) which helps researchers to ensure the robustness of the algorithm, correctness of the results in edge cases as well as the detection of changes in results due to new development. For all modules GRASS GIS automatically creates standardized command line and graphical user interfaces and documentation. Finally, we will show how GRASS GIS can be used together with powerful Python tools such as the NumPy package and the IPython Notebook. References: Gebbert, S., Pebesma, E., 2014. A temporal GIS for field based environmental modeling. Environmental Modelling & Software 53, 1-12. Neteler, M., Bowman, M.H., Landa, M. and Metz, M., 2012. GRASS GIS: a multi-purpose Open Source GIS. Environmental Modelling & Software 31: 124-130. Petras, V., Gebbert, S., 2014. Testing framework for GRASS GIS: ensuring reproducibility of scientific geospatial computing. Poster presented at: AGU Fall Meeting, December 15-19, 2014, San Francisco, USA. Zambelli, P., Gebbert, S., Ciolli, M., 2013. Pygrass: An Object Oriented Python Application Programming Interface (API) for Geographic Resources Analysis Support System (GRASS) Geographic Information System (GIS). ISPRS International Journal of Geo-Information 2, 201-219.

The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics.

PubMed

Pfeifer, Matthias; Martis, Mihaela; Asp, Torben; Mayer, Klaus F X; Lübberstedt, Thomas; Byrne, Stephen; Frei, Ursula; Studer, Bruno

2013-02-01

Whole-genome sequences established for model and major crop species constitute a key resource for advanced genomic research. For outbreeding forage and turf grass species like ryegrasses (Lolium spp.), such resources have yet to be developed. Here, we present a model of the perennial ryegrass (Lolium perenne) genome on the basis of conserved synteny to barley (Hordeum vulgare) and the model grass genome Brachypodium (Brachypodium distachyon) as well as rice (Oryza sativa) and sorghum (Sorghum bicolor). A transcriptome-based genetic linkage map of perennial ryegrass served as a scaffold to establish the chromosomal arrangement of syntenic genes from model grass species. This scaffold revealed a high degree of synteny and macrocollinearity and was then utilized to anchor a collection of perennial ryegrass genes in silico to their predicted genome positions. This resulted in the unambiguous assignment of 3,315 out of 8,876 previously unmapped genes to the respective chromosomes. In total, the GenomeZipper incorporates 4,035 conserved grass gene loci, which were used for the first genome-wide sequence divergence analysis between perennial ryegrass, barley, Brachypodium, rice, and sorghum. The perennial ryegrass GenomeZipper is an ordered, information-rich genome scaffold, facilitating map-based cloning and genome assembly in perennial ryegrass and closely related Poaceae species. It also represents a milestone in describing synteny between perennial ryegrass and fully sequenced model grass genomes, thereby increasing our understanding of genome organization and evolution in the most important temperate forage and turf grass species.

The Perennial Ryegrass GenomeZipper: Targeted Use of Genome Resources for Comparative Grass Genomics1[C][W

PubMed Central

Pfeifer, Matthias; Martis, Mihaela; Asp, Torben; Mayer, Klaus F.X.; Lübberstedt, Thomas; Byrne, Stephen; Frei, Ursula; Studer, Bruno

2013-01-01

Whole-genome sequences established for model and major crop species constitute a key resource for advanced genomic research. For outbreeding forage and turf grass species like ryegrasses (Lolium spp.), such resources have yet to be developed. Here, we present a model of the perennial ryegrass (Lolium perenne) genome on the basis of conserved synteny to barley (Hordeum vulgare) and the model grass genome Brachypodium (Brachypodium distachyon) as well as rice (Oryza sativa) and sorghum (Sorghum bicolor). A transcriptome-based genetic linkage map of perennial ryegrass served as a scaffold to establish the chromosomal arrangement of syntenic genes from model grass species. This scaffold revealed a high degree of synteny and macrocollinearity and was then utilized to anchor a collection of perennial ryegrass genes in silico to their predicted genome positions. This resulted in the unambiguous assignment of 3,315 out of 8,876 previously unmapped genes to the respective chromosomes. In total, the GenomeZipper incorporates 4,035 conserved grass gene loci, which were used for the first genome-wide sequence divergence analysis between perennial ryegrass, barley, Brachypodium, rice, and sorghum. The perennial ryegrass GenomeZipper is an ordered, information-rich genome scaffold, facilitating map-based cloning and genome assembly in perennial ryegrass and closely related Poaceae species. It also represents a milestone in describing synteny between perennial ryegrass and fully sequenced model grass genomes, thereby increasing our understanding of genome organization and evolution in the most important temperate forage and turf grass species. PMID:23184232

The impact of invasive grasses on the population growth of Anemone patens, a long-lived native forb.

PubMed

Williams, Jennifer L; Crone, Elizabeth E

2006-12-01

Negative impacts of invasive plants on natives have been well documented, but much less is known about whether invasive plants can cause population level declines. We used demographic models to investigate the effects of two invasive grasses on the demography and population growth of Anemone patens, a long-lived native perennial of North American grasslands. Demographic data of A. patens growing in patches characterized by Bromus inermis, Poa pratensis, or native grasses were used to parameterize integral projection models. Models based on both average conditions and those allowing for environmental stochasticity indicate that A. patens is slowly increasing in patches of native grass (lambda = 1.02) and declining in patches of invasive grasses, particularly those dominated by B. inermis (lambda = 0.93). Extinction probabilities indicate that A. patens should persist in native grass patches, but has a much higher probability of extinction in Bromus patches compared to Poa patches. While sensitivity analyses showed that survival had the biggest effect on population growth rates in all habitats, results of a Life Table Response Experiment (LTRE) revealed that slower individual growth rates in patches of invasive grasses contributed the most to the observed reduction in population growth. These results suggest that invasive grasses may cause slow declines in A. patens, despite short-term coexistence, and that controlling B. inermis only would not be sufficient to ensure A. patens persistence.

Spectral and spatial variability of undisturbed and disturbed grass under different view and illumination directions

NASA Astrophysics Data System (ADS)

Borel-Donohue, Christoph C.; Shivers, Sarah Wells; Conover, Damon

2017-05-01

It is well known that disturbed grass covered surfaces show variability with view and illumination conditions. A good example is a grass field in a soccer stadium that shows stripes indicating in which direction the grass was mowed. These spatial variations are due to a complex interplay of spectral characteristics of grass blades, density, their length and orientations. Viewing a grass surface from nadir or near horizontal directions results in observing different components. Views from a vertical direction show more variations due to reflections from the randomly oriented grass blades and their shadows. Views from near horizontal show a mixture of reflected and transmitted light from grass blades. An experiment was performed on a mowed grass surface which had paths of simulated heavy foot traffic laid down in different directions. High spatial resolution hyperspectral data cubes were taken by an imaging spectrometer covering the visible through near infrared over a period of time covering several hours. Ground truth grass reflectance spectra with a hand held spectrometer were obtained of undisturbed and disturbed areas. Close range images were taken of selected areas with a hand held camera which were then used to reconstruct the 3D geometry of the grass using structure-from-motion algorithms. Computer graphics rendering using raytracing of reconstructed and procedurally created grass surfaces were used to compute BRDF models. In this paper, we discuss differences between observed and simulated spectral and spatial variability. Based on the measurements and/or simulations, we derive simple spectral index methods to detect spatial disturbances and apply scattering models.

Effect of Microgravity on Mammalian Lymphocytes

NASA Technical Reports Server (NTRS)

Banerjee, H.; Blackshear, M.; Mahaffey, K.; Knight, C.; Khan, A. A.; Delucas, L.

2004-01-01

The effect of microgravity on mammalian system is an important and interesting topic for scientific investigation, since NASA s objective is to send manned flights to planets like Mars and eventual human colonization.The Astronauts will be exposed to microgravity environment for a long duration of time during these flights.Our objective of research is to conduct in vitro studies for the effect of microgravity on mammalian immune system.We did our preliminary investigations by exposing mammalian lymphocytes to a microgravity simulator cell bioreactor designed by NASA and manufactured at Synthecon Inc (USA).Our initial results showed no significant change in cytokine expression in these cells for a time period of forty eight hours exposure.Our future experiments will involve exposure for a longer period of time.

Mechanistic prediction of fission-gas behavior during in-cell transient heating tests on LWR fuel using the GRASS-SST and FASTGRASS computer codes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rest, J; Gehl, S M

1979-01-01

GRASS-SST and FASTGRASS are mechanistic computer codes for predicting fission-gas behavior in UO/sub 2/-base fuels during steady-state and transient conditions. FASTGRASS was developed in order to satisfy the need for a fast-running alternative to GRASS-SST. Althrough based on GRASS-SST, FASTGRASS is approximately an order of magnitude quicker in execution. The GRASS-SST transient analysis has evolved through comparisons of code predictions with the fission-gas release and physical phenomena that occur during reactor operation and transient direct-electrical-heating (DEH) testing of irradiated light-water reactor fuel. The FASTGRASS calculational procedure is described in this paper, along with models of key physical processes included inmore » both FASTGRASS and GRASS-SST. Predictions of fission-gas release obtained from GRASS-SST and FASTGRASS analyses are compared with experimental observations from a series of DEH tests. The major conclusions is that the computer codes should include an improved model for the evolution of the grain-edge porosity.« less

Small mammal use of native warm-season and non-native cool-season grass forage fields

USGS Publications Warehouse

Ryan L Klimstra,; Christopher E Moorman,; Converse, Sarah J.; Royle, J. Andrew; Craig A Harper,

2015-01-01

Recent emphasis has been put on establishing native warm-season grasses for forage production because it is thought native warm-season grasses provide higher quality wildlife habitat than do non-native cool-season grasses. However, it is not clear whether native warm-season grass fields provide better resources for small mammals than currently are available in non-native cool-season grass forage production fields. We developed a hierarchical spatially explicit capture-recapture model to compare abundance of hispid cotton rats (Sigmodon hispidus), white-footed mice (Peromyscus leucopus), and house mice (Mus musculus) among 4 hayed non-native cool-season grass fields, 4 hayed native warm-season grass fields, and 4 native warm-season grass-forb ("wildlife") fields managed for wildlife during 2 summer trapping periods in 2009 and 2010 of the western piedmont of North Carolina, USA. Cotton rat abundance estimates were greater in wildlife fields than in native warm-season grass and non-native cool-season grass fields and greater in native warm-season grass fields than in non-native cool-season grass fields. Abundances of white-footed mouse and house mouse populations were lower in wildlife fields than in native warm-season grass and non-native cool-season grass fields, but the abundances were not different between the native warm-season grass and non-native cool-season grass fields. Lack of cover following haying in non-native cool-season grass and native warm-season grass fields likely was the key factor limiting small mammal abundance, especially cotton rats, in forage fields. Retention of vegetation structure in managed forage production systems, either by alternately resting cool-season and warm-season grass forage fields or by leaving unharvested field borders, should provide refugia for small mammals during haying events.

Investigation of the Acoustics of Marine Sediments using an Impedance Tube

DTIC Science & Technology

2007-09-30

Thalassia testudinum (turtle grass), Syringodium filiforme (manatee grass), and Halodule wrightii (shoal grass). The work led to an invited paper and...equation could be used to model sound propagation in seagrass beds as an effective medium. A typical result for the species Thalassia testudinum (turtle...analysis (Fig. 13), was found to be χleaf = 0.23. Similar results were found the Thalassia testudinum (turtle grass) rhizomes (underground root

Genome sequencing and analysis of the model grass Brachypodium distachyon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yang, Xiaohan; Kalluri, Udaya C; Tuskan, Gerald A

Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the Pooideae subfamily to be sequenced. Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome evolution across a broad diversity of the grasses, and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat. The high-quality genome sequence, coupled with easemore » of cultivation and transformation, small size and rapid life cycle, will help Brachypodium reach its potential as an important model system for developing new energy and food crops.« less

Revisiting the two-layer hypothesis: coexistence of alternative functional rooting strategies in savannas.

PubMed

Holdo, Ricardo M

2013-01-01

The two-layer hypothesis of tree-grass coexistence posits that trees and grasses differ in rooting depth, with grasses exploiting soil moisture in shallow layers while trees have exclusive access to deep water. The lack of clear differences in maximum rooting depth between these two functional groups, however, has caused this model to fall out of favor. The alternative model, the demographic bottleneck hypothesis, suggests that trees and grasses occupy overlapping rooting niches, and that stochastic events such as fires and droughts result in episodic tree mortality at various life stages, thus preventing trees from otherwise displacing grasses, at least in mesic savannas. Two potential problems with this view are: 1) we lack data on functional rooting profiles in trees and grasses, and these profiles are not necessarily reflected by differences in maximum or physical rooting depth, and 2) subtle, difficult-to-detect differences in rooting profiles between the two functional groups may be sufficient to result in coexistence in many situations. To tackle this question, I coupled a plant uptake model with a soil moisture dynamics model to explore the environmental conditions under which functional rooting profiles with equal rooting depth but different depth distributions (i.e., shapes) can coexist when competing for water. I show that, as long as rainfall inputs are stochastic, coexistence based on rooting differences is viable under a wide range of conditions, even when these differences are subtle. The results also indicate that coexistence mechanisms based on rooting niche differentiation are more viable under some climatic and edaphic conditions than others. This suggests that the two-layer model is both viable and stochastic in nature, and that a full understanding of tree-grass coexistence and dynamics may require incorporating fine-scale rooting differences between these functional groups and realistic stochastic climate drivers into future models.

Revisiting the Two-Layer Hypothesis: Coexistence of Alternative Functional Rooting Strategies in Savannas

PubMed Central

Holdo, Ricardo M.

2013-01-01

The two-layer hypothesis of tree-grass coexistence posits that trees and grasses differ in rooting depth, with grasses exploiting soil moisture in shallow layers while trees have exclusive access to deep water. The lack of clear differences in maximum rooting depth between these two functional groups, however, has caused this model to fall out of favor. The alternative model, the demographic bottleneck hypothesis, suggests that trees and grasses occupy overlapping rooting niches, and that stochastic events such as fires and droughts result in episodic tree mortality at various life stages, thus preventing trees from otherwise displacing grasses, at least in mesic savannas. Two potential problems with this view are: 1) we lack data on functional rooting profiles in trees and grasses, and these profiles are not necessarily reflected by differences in maximum or physical rooting depth, and 2) subtle, difficult-to-detect differences in rooting profiles between the two functional groups may be sufficient to result in coexistence in many situations. To tackle this question, I coupled a plant uptake model with a soil moisture dynamics model to explore the environmental conditions under which functional rooting profiles with equal rooting depth but different depth distributions (i.e., shapes) can coexist when competing for water. I show that, as long as rainfall inputs are stochastic, coexistence based on rooting differences is viable under a wide range of conditions, even when these differences are subtle. The results also indicate that coexistence mechanisms based on rooting niche differentiation are more viable under some climatic and edaphic conditions than others. This suggests that the two-layer model is both viable and stochastic in nature, and that a full understanding of tree-grass coexistence and dynamics may require incorporating fine-scale rooting differences between these functional groups and realistic stochastic climate drivers into future models. PMID:23950900

Climate, CO2, and the history of North American grasses since the Last Glacial Maximum

PubMed Central

Cotton, Jennifer M.; Cerling, Thure E.; Hoppe, Kathryn A.; Mosier, Thomas M.; Still, Christopher J.

2016-01-01

The spread of C4 grasses in the late Neogene is one of the most important ecological transitions of the Cenozoic, but the primary driver of this global expansion is widely debated. We use the stable carbon isotopic composition (δ13C) of bison and mammoth tissues as a proxy for the relative abundance of C3 and C4 vegetation in their grazing habitat to determine climatic and atmospheric CO2 controls on C4 grass distributions from the Last Glacial Maximum (LGM) to the present. We predict the spatial variability of grass δ13C in North America using a mean of three different methods of classification and regression tree (CART) machine learning techniques and nine climatic variables. We show that growing season precipitation and temperature are the strongest predictors of all single climate variables. We apply this CART analysis to high-resolution gridded climate data and Coupled Model Intercomparison Project (CMIP5) mean paleoclimate model outputs to produce predictive isotope landscape models (“isoscapes”) for the current, mid-Holocene, and LGM average δ13C of grass-dominated areas across North America. From the LGM to the present, C4 grass abundances substantially increased in the Great Plains despite concurrent increases in atmospheric CO2. These results suggest that changes in growing season precipitation rather than atmospheric CO2 were critically important in the Neogene expansion of C4 grasses. PMID:27051865

EBIPM | Finding the Tools to Manage Invasive Annual Grasses

Science.gov Websites

Grass Management How much could prevention save you? Guidelines to Implement EBIPM Weed Prevention Areas Grass Facts/ID The EBIPM Model Crooked River Weed Management Area Guide Tools for Educators EBIPM High Agricultural Research Center for more information on invasive plant research. Eastern Oregon Agricultural

Modelling Water Uptake Provides a New Perspective on Grass and Tree Coexistence

PubMed Central

2015-01-01

Root biomass distributions have long been used to infer patterns of resource uptake. These patterns are used to understand plant growth, plant coexistence and water budgets. Root biomass, however, may be a poor indicator of resource uptake because large roots typically do not absorb water, fine roots do not absorb water from dry soils and roots of different species can be difficult to differentiate. In a sub-tropical savanna, Kruger Park, South Africa, we used a hydrologic tracer experiment to describe the abundance of active grass and tree roots across the soil profile. We then used this tracer data to parameterize a water movement model (Hydrus 1D). The model accounted for water availability and estimated grass and tree water uptake by depth over a growing season. Most root biomass was found in shallow soils (0–20 cm) and tracer data revealed that, within these shallow depths, half of active grass roots were in the top 12 cm while half of active tree roots were in the top 21 cm. However, because shallow soils provided roots with less water than deep soils (20–90 cm), the water movement model indicated that grass and tree water uptake was twice as deep as would be predicted from root biomass or tracer data alone: half of grass and tree water uptake occurred in the top 23 and 43 cm, respectively. Niche partitioning was also greater when estimated from water uptake rather than tracer uptake. Contrary to long-standing assumptions, shallow grass root distributions absorbed 32% less water than slightly deeper tree root distributions when grasses and trees were assumed to have equal water demands. Quantifying water uptake revealed deeper soil water uptake, greater niche partitioning and greater benefits of deep roots than would be estimated from root biomass or tracer uptake data alone. PMID:26633177

Ecophysiological responses of native and invasive grasses to simulated warming and drought

NASA Astrophysics Data System (ADS)

Ravi, S.; Law, D. J.; Wiede, A.; Barron-Gafford, G. A.; Breshears, D. D.; Dontsova, K.; Huxman, T. E.

2011-12-01

Climate models predict that many arid regions around the world - including the North American deserts - may become affected more frequently by recurrent droughts. At the same time, these regions are experiencing rapid vegetation transformations such as invasion by exotic grasses. Thus, understanding the ecophysiological processes accompanying exotic grass invasion in the context of rising temperatures and recurrent droughts is fundamental to global change research. Under ambient and warmer (+ 4° C) conditions inside the Biosphere 2 facility, we compared the ecophysiological responses (e.g. photosynthesis, stomatal conductance, pre-dawn leaf water potential, light & CO2 response functions, biomass) of a native grass - Heteropogan contortus (Tangle head) and an invasive grass - Pennisetum ciliare (Buffel grass) growing in single and mixed communities. Further, we monitored the physiological responses and mortality of these plant communities under moisture stress conditions, simulating a global change-type-drought. The results indicate that the predicted warming scenarios may enhance the invasibility of desert landscapes by exotic grasses. In this study, buffel grass assimilated more CO2 per unit leaf area and out-competed native grasses more efficiently in a warmer environment. However, scenarios involving a combination of drought and warming proved disastrous to both the native and invasive grasses, with drought-induced grass mortality occurring at much shorter time scales under warmer conditions.

Mapping and modeling the biogeochemical cycling of turf grasses in the United States.

PubMed

Milesi, Cristina; Running, Steven W; Elvidge, Christopher D; Dietz, John B; Tuttle, Benjamin T; Nemani, Ramakrishna R

2005-09-01

Turf grasses are ubiquitous in the urban landscape of the United States and are often associated with various types of environmental impacts, especially on water resources, yet there have been limited efforts to quantify their total surface and ecosystem functioning, such as their total impact on the continental water budget and potential net ecosystem exchange (NEE). In this study, relating turf grass area to an estimate of fractional impervious surface area, it was calculated that potentially 163,800 km2 (+/- 35,850 km2) of land are cultivated with turf grasses in the continental United States, an area three times larger than that of any irrigated crop. Using the Biome-BGC ecosystem process model, the growth of warm-season and cool-season turf grasses was modeled at a number of sites across the 48 conterminous states under different management scenarios, simulating potential carbon and water fluxes as if the entire turf surface was to be managed like a well-maintained lawn. The results indicate that well-watered and fertilized turf grasses act as a carbon sink. The potential NEE that could derive from the total surface potentially under turf (up to 17 Tg C/yr with the simulated scenarios) would require up to 695 to 900 liters of water per person per day, depending on the modeled water irrigation practices, suggesting that outdoor water conservation practices such as xeriscaping and irrigation with recycled waste-water may need to be extended as many municipalities continue to face increasing pressures on freshwater.

Climate change drives a northward expansion of C4 grasses in North America by the end of the century

NASA Astrophysics Data System (ADS)

Cotton, J. M.; Mosier, T. M.; Cerling, T. E.; Ehleringer, J. R.; Hoppe, K. A.; Still, C. J.

2016-12-01

C4 grasses currently cover 18% of the earth's surface and are critically important as food sources, and account for roughly 25% of terrestrial productivity. Yet in the future these patterns will change as a result of the opposing impacts of atmospheric CO2 and climate on C3 and C4 physiologies. Here, we use the carbon isotope ratio (d13C) of modern and fossil bison and mammoth tissues as a proxy for the abundance of C3 and C4 vegetation across North American habitats. We then combine stable isotope data with CMIP5 climate model simulations, and used eight different climatic predictor variables and advanced statistical techniques to model the spatial distributions of C3 and C4 grasses from today through the year 2100 for two fossil-fuel emissions scenarios. For both scenarios, our vegetation model predicts increases in C4 grass abundance of up to 50% in the northern Great Plains and moderate decreases in C4 grass abundance in the central and southern Great Plains. The overall effect of these C3/C4 distribution changes will be a decreases in the magnitude of the north-south grass gradient in the Great Plains ecoregion with the loss of the highest abundance of C4 ecosystems in the panhandles of Texas, Oklahoma and western Kansas. These results have important implications for future changes in animal and plant biodiversity, agricultural productivity, and C4 grass invasions in North America. Our study suggests that changing climates will likely start to favor C4 crops over C3 crops in the northern Great Plains, potentially influencing the nature of different grain food supplies. Additionally, changes in C3 and C4 grass distributions, including decreases in the abundance of C3 grasses in native grasslands in the northern Great Plains, could have negative effects on the fauna that feed preferentially on those C3 grasses, and may also reduce also the number of unique habitats that currently maintain high biodiversity.

Native Grasses as a Management Alternative on Vegetated Closure Caps

NASA Astrophysics Data System (ADS)

Kwit, Charles; Collins, Beverly

2008-06-01

Capped waste sites often are vegetated with commercial turf grasses to increase evapotranspiration and prevent erosion and possible exposure of the barrier. Fertilizer, frequent watering, and mowing may be required to establish the turf grass and prevent invasion by trees and shrubs. Oldfield vegetation of grasses and forbs is a possible sustainable alternative to turf grass communities. To determine if oldfield vegetation can establish on caps, we (1) compared establishment of a dominant oldfield grass and a commercial turf grass under different combinations of new closure cap management: spring or summer planting and presence or absence of amendments to alleviate drought (watering, mulch) or increase soil fertility (fertilizer, lime, a nitrogen-fixing legume); (2) surveyed existing caps to determine if oldfield species establish naturally; and (3) performed a greenhouse experiment to compare growth of two native grasses under low and amended (added water, soil nutrients) conditions. Both the commercial grass and oldfield species established under new cap conditions; fertilizer, water, and mulch improved vegetation establishment in spring or summer, but legumes decreased grass cover. In the greenhouse, both native grasses grew best with amendments; however, substantial stem and root length were obtained with no fertilizer and only once-weekly watering. Existing vegetated caps supported planted grasses and naturally established oldfield species. Overall, the results indicate native grasses can establish on new caps and oldfields can serve as a management model; further work is needed to determine the management strategy to maintain herbaceous vegetation and slow woody species invasion.

Dynamic ecological observations from satellites inform aerobiology of allergenic grass pollen.

PubMed

Devadas, Rakhesh; Huete, Alfredo R; Vicendese, Don; Erbas, Bircan; Beggs, Paul J; Medek, Danielle; Haberle, Simon G; Newnham, Rewi M; Johnston, Fay H; Jaggard, Alison K; Campbell, Bradley; Burton, Pamela K; Katelaris, Constance H; Newbigin, Ed; Thibaudon, Michel; Davies, Janet M

2018-08-15

Allergic diseases, including respiratory conditions of allergic rhinitis (hay fever) and asthma, affect up to 500 million people worldwide. Grass pollen are one major source of aeroallergens globally. Pollen forecast methods are generally site-based and rely on empirical meteorological relationships and/or the use of labour-intensive pollen collection traps that are restricted to sparse sampling locations. The spatial and temporal dynamics of the grass pollen sources themselves, however, have received less attention. Here we utilised a consistent set of MODIS satellite measures of grass cover and seasonal greenness (EVI) over five contrasting urban environments, located in Northern (France) and Southern Hemispheres (Australia), to evaluate their utility for predicting airborne grass pollen concentrations. Strongly seasonal and pronounced pollinating periods, synchronous with satellite measures of grass cover greenness, were found at the higher latitude temperate sites in France (46-50° N. Lat.), with peak pollen activity lagging peak greenness, on average by 2-3weeks. In contrast, the Australian sites (34-38° S. Lat.) displayed pollinating periods that were less synchronous with satellite greenness measures as peak pollen concentrations lagged peak greenness by as much as 4 to 7weeks. The Australian sites exhibited much higher spatial and inter-annual variations compared to the French sites and at the Sydney site, broader and multiple peaks in both pollen concentrations and greenness data coincided with flowering of more diverse grasses including subtropical species. Utilising generalised additive models (GAMs) we found the satellite greenness data of grass cover areas explained 80-90% of airborne grass pollen concentrations across the three French sites (p<0.001) and accounted for 34 to 76% of grass pollen variations over the two sites in Australia (p<0.05). Our results demonstrate the potential of satellite sensing to augment forecast models of grass pollen aerobiology as a tool to reduce the health and socioeconomic burden of pollen-sensitive allergic diseases. Copyright © 2018 Elsevier B.V. All rights reserved.

Novel application of ALMANAC: Modelling a functional group, exotic warm-season perennial grasses

USDA-ARS?s Scientific Manuscript database

Introduced perennial C4 grasses such buffelgrass (Pennisetum ciliare [(L.) Link]) and old world bluestems (OWB), including genera such as Bothriochloa Kuntze, Capillipedium Stapf, and Dichanthium Willemet have the potential to dominate landscapes. A process-based model that realistically simulates ...

Improving dynamic global vegetation model (DGVM) simulation of western U.S. rangelands vegetation seasonal phenology and productivity

NASA Astrophysics Data System (ADS)

Kerns, B. K.; Kim, J. B.; Day, M. A.; Pitts, B.; Drapek, R. J.

2017-12-01

Ecosystem process models are increasingly being used in regional assessments to explore potential changes in future vegetation and NPP due to climate change. We use the dynamic global vegetation model MAPSS-Century 2 (MC2) as one line of evidence for regional climate change vulnerability assessments for the US Forest Service, focusing our fine tuning model calibration from observational sources related to forest vegetation. However, there is much interest in understanding projected changes for arid rangelands in the western US such as grasslands, shrublands, and woodlands. Rangelands provide many ecosystem service benefits and local rural human community sustainability, habitat for threatened and endangered species, and are threatened by annual grass invasion. Past work suggested MC2 performance related to arid rangeland plant functional types (PFT's) was poor, and the model has difficulty distinguishing annual versus perennial grasslands. Our objectives are to increase the model performance for rangeland simulations and explore the potential for splitting the grass plant functional type into annual and perennial. We used the tri-state Blue Mountain Ecoregion as our study area and maps of potential vegetation from interpolated ground data, the National Land Cover Data Database, and ancillary NPP data derived from the MODIS satellite. MC2 historical simulations for the area overestimated woodland occurrence and underestimated shrubland and grassland PFT's. The spatial location of the rangeland PFT's also often did not align well with observational data. While some disagreement may be due to differences in the respective classification rules, the errors are largely linked to MC2's tree and grass biogeography and physiology algorithms. Presently, only grass and forest productivity measures and carbon stocks are used to distinguish PFT's. MC2 grass and tree productivity simulation is problematic, in particular grass seasonal phenology in relation to seasonal patterns of temperature and precipitation. The algorithm also does not accurately translate simulated carbon stocks into the canopy allometry of woodland tree species that dominate the BME, thereby inaccurately shading out the grasses in the understory. We are devising improvements to these shortcomings in the model architecture.

Cell wall composition throughout development for the model grass Brachypodium distachyon

PubMed Central

Rancour, David M.; Marita, Jane M.; Hatfield, Ronald D.

2012-01-01

Temperate perennial grasses are important worldwide as a livestock nutritive energy source and a potential feedstock for lignocellulosic biofuel production. The annual temperate grass Brachypodium distachyon has been championed as a useful model system to facilitate biological research in agriculturally important temperate forage grasses based on phylogenetic relationships. To physically corroborate genetic predictions, we determined the chemical composition profiles of organ-specific cell walls throughout the development of two common diploid accessions of Brachypodium distachyon, Bd21-3 and Bd21. Chemical analysis was performed on cell walls isolated from distinct organs (i.e., leaves, sheaths, stems, and roots) at three developmental stages of (1) 12-day seedling, (2) vegetative-to-reproductive transition, and (3) mature seed fill. In addition, we have included cell wall analysis of embryonic callus used for genetic transformations. Composition of cell walls based on components lignin, hydroxycinnamates, uronosyls, neutral sugars, and protein suggests that Brachypodium distachyon is similar chemically to agriculturally important forage grasses. There were modest compositional differences in hydroxycinnamate profiles between accessions Bd21-3 and Bd21. In addition, when compared to agronomical important C3 grasses, more mature Brachypodium stem cell walls have a relative increase in glucose of 48% and a decrease in lignin of 36%. Though differences exist between Brachypodium and agronomical important C3 grasses, Brachypodium distachyon should be still a useful model system for genetic manipulation of cell wall composition to determine the impact upon functional characteristics such as rumen digestibility or energy conversion efficiency for bioenergy production. PMID:23227028

Influence of Cleats-Surface Interaction on the Performance and Risk of Injury in Soccer: A Systematic Review

PubMed Central

Macedo, Rui; Montes, António Mesquita

2017-01-01

Objective To review the influence of cleats-surface interaction on the performance and risk of injury in soccer athletes. Design Systematic review. Data Sources Scopus, Web of science, PubMed, and B-on. Eligibility Criteria Full experimental and original papers, written in English that studied the influence of soccer cleats on sports performance and injury risk in artificial or natural grass. Results Twenty-three articles were included in this review: nine related to performance and fourteen to injury risk. On artificial grass, the soft ground model on dry and wet conditions and the turf model in wet conditions are related to worse performance. Compared to rounded studs, bladed ones improve performance during changes of directions in both natural and synthetic grass. Cleat models presenting better traction on the stance leg improve ball velocity while those presenting a homogeneous pressure across the foot promote better kicking accuracy. Bladed studs can be considered less secure by increasing plantar pressure on lateral border. The turf model decrease peak plantar pressure compared to other studded models. Conclusion The soft ground model provides lower performance especially on artificial grass, while the turf model provides a high protective effect in both fields. PMID:28684897

Influence of Cleats-Surface Interaction on the Performance and Risk of Injury in Soccer: A Systematic Review.

PubMed

Silva, Diogo C F; Santos, Rubim; Vilas-Boas, João Paulo; Macedo, Rui; Montes, António Mesquita; Sousa, Andreia S P

2017-01-01

To review the influence of cleats-surface interaction on the performance and risk of injury in soccer athletes. Systematic review. Scopus, Web of science, PubMed, and B-on. Full experimental and original papers, written in English that studied the influence of soccer cleats on sports performance and injury risk in artificial or natural grass. Twenty-three articles were included in this review: nine related to performance and fourteen to injury risk. On artificial grass, the soft ground model on dry and wet conditions and the turf model in wet conditions are related to worse performance. Compared to rounded studs, bladed ones improve performance during changes of directions in both natural and synthetic grass. Cleat models presenting better traction on the stance leg improve ball velocity while those presenting a homogeneous pressure across the foot promote better kicking accuracy. Bladed studs can be considered less secure by increasing plantar pressure on lateral border. The turf model decrease peak plantar pressure compared to other studded models. The soft ground model provides lower performance especially on artificial grass, while the turf model provides a high protective effect in both fields.

Confronting species distribution model predictions with species functional traits.

PubMed

Wittmann, Marion E; Barnes, Matthew A; Jerde, Christopher L; Jones, Lisa A; Lodge, David M

2016-02-01

Species distribution models are valuable tools in studies of biogeography, ecology, and climate change and have been used to inform conservation and ecosystem management. However, species distribution models typically incorporate only climatic variables and species presence data. Model development or validation rarely considers functional components of species traits or other types of biological data. We implemented a species distribution model (Maxent) to predict global climate habitat suitability for Grass Carp (Ctenopharyngodon idella). We then tested the relationship between the degree of climate habitat suitability predicted by Maxent and the individual growth rates of both wild (N = 17) and stocked (N = 51) Grass Carp populations using correlation analysis. The Grass Carp Maxent model accurately reflected the global occurrence data (AUC = 0.904). Observations of Grass Carp growth rate covered six continents and ranged from 0.19 to 20.1 g day(-1). Species distribution model predictions were correlated (r = 0.5, 95% CI (0.03, 0.79)) with observed growth rates for wild Grass Carp populations but were not correlated (r = -0.26, 95% CI (-0.5, 0.012)) with stocked populations. Further, a review of the literature indicates that the few studies for other species that have previously assessed the relationship between the degree of predicted climate habitat suitability and species functional traits have also discovered significant relationships. Thus, species distribution models may provide inferences beyond just where a species may occur, providing a useful tool to understand the linkage between species distributions and underlying biological mechanisms.

Seasonal, inter-annual and decadal drivers of tree and grass productivity in an Australian tropical savanna.

NASA Astrophysics Data System (ADS)

Moore, C.; Beringer, J.; Hutley, L. B.; Evans, B. J.; Tapper, N. J.; Donohue, R. J.; Exbrayat, J. F.

2016-12-01

Tree-grass savannas are a widespread biome and are highly valued for their ecosystem services. Natural or anthropogenic shifts in the savanna tree-grass ratio have wide-reaching implications for food production, timber harvesting, biodiversity, the water cycle and carbon sequestration. It is important to understand the long-term dynamics and drivers of both tree and grass productivity separately, in order to successfully manage savannas in the future. This study investigates the inter-annual variability (IAV) of tree (overstory) and grass (understory) productivity at the Howard Springs OzFlux/Fluxnet site by combining a long-term (15 year) eddy covariance flux record and DIFFUSE model estimates of tree and grass productivity inferred from satellite remote sensing. On a seasonal basis, the primary drivers of overstory and understory productivity were solar radiation in the wet season and soil moisture in the dry season, with deeper soil layers becoming more important as the dry season progressed. On an inter-annual basis, variability in the amount of annual rainfall and length of the rainy season determined soil water availability, which had a positive effect on overstory productivity and a negative effect on understory productivity. No linear trend in the tree-grass ratio was observed over the 15-year study period, indicating that woody encroachment was not occurring to a significant degree at the study site. However, the tree-grass ratio was well correlated with modes of climate variability, namely the Southern Oscillation Index. This study has provided important insight into the long-term contributions of trees and grasses to savanna productivity, along with the respective drivers of IAV. The results will contribute towards model development and building better links with remote sensing techniques in order to more comprehensively monitor savanna structure and function across space and time.

Further Development of a Computational Vision Model for the Generation and Analysis of Photo-Realistic Scenes for Military and Civilian Virtual Reality Applications

DTIC Science & Technology

1996-02-01

rectangle in the center of the image straddling the boundary between the foreground grass and background treeline . The synthetic content of the target region...the square in the middle of the grass, the square in the middle of the tree leaves, and the square on the treeline are all synthetic textures. The...target rectangle on the treeline boundary. What was suprising was that the synthetic grass texture was not well matched in the rectangle in the grass

The interplay between the effectiveness of the grass-endophyte mutualism and the genetic variability of the host plant

PubMed Central

Gundel, Pedro E; Omacini, Marina; Sadras, Victor O; Ghersa, Claudio M

2010-01-01

Neotyphodium endophytic fungi, the asexual state of Epichloë species, protect cool-season grasses against stresses. The outcomes of Neotyphodium-grass symbioses are agronomically relevant as they may affect the productivity of pastures. It has been suggested that the mutualism is characteristic of agronomic grasses and that differential rates of gene flow between both partners’ populations are expected to disrupt the specificity of the association and, thus, the mutualism in wild grasses. We propose that compatibility is necessary but not sufficient to explain the outcomes of Neotyphodium-grass symbiosis, and advance a model that links genetic compatibility, mutualism effectiveness, and endophyte transmission efficiency. For endophytes that reproduce clonally and depend on allogamous hosts for reproduction and dissemination, we propose that this symbiosis works as an integrated entity where gene flow promotes its fitness and evolution. Compatibility between the host plant and the fungal endophyte would be high in genetically close parents; however, mutualism effectiveness and transmission efficiency would be low in fitness depressed host plants. Increasing the genetic distance of mating parents would increase mutualism effectiveness and transmission efficiency. This tendency would be broken when the genetic distance between parents is high (out-breeding depression). Our model allows for testable hypotheses that would contribute to understand the coevolutionary origin and future of the endophyte-grass mutualism. PMID:25567945

Regression Model for MODTRAN with Applications to Inactivation of Microbes Suspended in the Atmosphere by Solar Ultraviolet Radiation

DTIC Science & Technology

2012-05-01

mixed vegetation): 0.007 (0.017) For materials tested, • The albedo levels of old grass, dead grass, burnt grass, and maple leaf at 300 nm were...as 0.016-0.017 over vegetation, 0.04-0.05 over bare fertile soil, and 0.07-0.10 over concrete (autobahn, Germany). The albedo over dry bright sand

Competition between trees and grasses for both soil water and mineral nitrogen in dry savannas.

PubMed

Donzelli, D; De Michele, C; Scholes, R J

2013-09-07

The co-existence of trees and grasses in savannas in general can be the result of processes involving competition for resources (e.g. water and nutrients) or differential response to disturbances such as fire, animals and human activities; or a combination of both broad mechanisms. In moist savannas, the tree-grass coexistence is mainly attributed to of disturbances, while in dry savannas, limiting resources are considered the principal mechanism of co-existence. Virtually all theoretical explorations of tree-grass dynamics in dry savannas consider only competition for soil water. Here we investigate whether coexistence could result from a balanced competition for two resources, namely soil water and mineral nitrogen. We introduce a simple dynamical resource-competition model for trees and grasses. We consider two alternative hypotheses: (1) trees are the superior competitors for nitrogen while grasses are superior competitors for water, and (2) vice-versa. We study the model properties under the two hypotheses and test each hypothesis against data from 132 dry savannas in Africa using Kendall's test of independence. We find that Hypothesis 1 gets much more support than Hypothesis 2, and more support than the null hypothesis that neither is operative. We further consider gradients of rainfall and nitrogen availability and find that the Hypothesis 1 model reproduces the observed patterns in nature. We do not consider our results to definitively show that tree-grass coexistence in dry savannas is due to balanced competition for water and nitrogen, but show that this mechanism is a possibility, which cannot be a priori excluded and should thus be considered along with the more traditional explanations. Copyright © 2013 Elsevier Ltd. All rights reserved.

QTLs for resistance to the leaf rust Puccinia brachypodii in the model grass Brachypodium distachyon

USDA-ARS?s Scientific Manuscript database

The wild grass Brachypodium distachyon is a useful new model for temperate cereals, but its potential to study the interactions with pathogens remains underexploited. Leaf rust is one of the major fungal diseases affecting cereals, and recently the host status of Brachypodium to Puccinia rusts was i...

Green leaf volatiles, fire and nonanoic acid activate MAPkinases in the model grass species Lolium temulentum

USDA-ARS?s Scientific Manuscript database

Forage and turf related grasses are utilized in diverse environments where they are routinely subjected to herbicides and exposed to fire and volatiles after cutting, however very little is known concerning the perception or molecular responses to these different stresses or compounds. In the model ...

Molecular fingerprinting of complex grass allergoids: size assessments reveal new insights in epitope repertoires and functional capacities.

PubMed

Starchenka, S; Bell, A J; Mwange, J; Skinner, M A; Heath, M D

2017-01-01

Subcutaneous allergen immunotherapy (SCIT) is a well-documented treatment for allergic disease which involves injections of native allergen or modified (allergoid) extracts. The use of allergoid vaccines is a growing sector of the allergy immunotherapy market, associated with shorter-course therapy. The aim of this study was the structural and immunological characterisation of group 1 (Lol p 1) IgG-binding epitopes within a complex mix grass allergoid formulation containing rye grass. HP-SEC was used to resolve a mix grass allergoid preparation of high molecular weight into several distinct fractions with defined molecular weight and elution profiles. Allergen verification of the HP-SEC allergoid fractions was confirmed by mass spectrometry analysis. IgE and IgG immunoreactivity of the allergoid preparations was explored and Lol p 1 specific IgG-binding epitopes mapped by SPOT synthesis technology (PepSpot™) with structural analysis based on a Lol p 1 homology model. Grass specific IgE reactivity of the mix grass modified extract (allergoid) was diminished in comparison with the mix grass native extract. A difference in IgG profiles was observed between an intact mix grass allergoid preparation and HP-SEC allergoid fractions, which indicated enhancement of accessible reactive IgG epitopes across size distribution profiles of the mix grass allergoid formulation. Detailed analysis of the epitope specificity showed retention of six Lol p 1 IgG-binding epitopes in the mix grass modified extract. The structural and immunological changes which take place following the grass allergen modification process was further unravelled revealing distinct IgG immunological profiles. All epitopes were mapped on the solvent exposed area of Lol p 1 homology model accessible for IgG binding. One of the epitopes was identified as an 'immunodominant' Lol p 1 IgG-binding epitope (62-IFKDGRGCGSCFEIK-76) and classified as a novel epitope. The results from this study support the concept that modification allows shorter-course therapy options as a result of providing an IgG epitope repertoire important for efficacy. Additionally, the work paves the way to help further develop methods for standardising allergoid platforms.

Improving our understanding of environmental controls on the distribution of C3 and C4 grasses.

PubMed

Pau, Stephanie; Edwards, Erika J; Still, Christopher J

2013-01-01

A number of studies have demonstrated the ecological sorting of C3 and C4 grasses along temperature and moisture gradients. However, previous studies of C3 and C4 grass biogeography have often inadvertently compared species in different and relatively unrelated lineages, which are associated with different environmental settings and distinct adaptive traits. Such confounded comparisons of C3 and C4 grasses may bias our understanding of ecological sorting imposed strictly by photosynthetic pathway. Here, we used MaxEnt species distribution modeling in combination with satellite data to understand the functional diversity of C3 and C4 grasses by comparing both large clades and closely related sister taxa. Similar to previous work, we found that C4 grasses showed a preference for regions with higher temperatures and lower precipitation compared with grasses using the C3 pathway. However, air temperature differences were smaller (2 °C vs. 4 °C) and precipitation and % tree cover differences were larger (1783 mm vs. 755 mm, 21.3% vs. 7.7%, respectively) when comparing C3 and C4 grasses within the same clade vs. comparing all C4 and all C3 grasses (i.e., ignoring phylogenetic structure). These results were due to important differences in the environmental preferences of C3 BEP and PACMAD clades (the two main grass clades). Winter precipitation was found to be more important for understanding the distribution and environmental niche of C3 PACMADs in comparison with both C3 BEPs and C4 taxa, for which temperature was much more important. Results comparing closely related C3 -C4 sister taxa supported the patterns derived from our modeling of the larger clade groupings. Our findings, which are novel in comparing the distribution and niches of clades, demonstrate that the evolutionary history of taxa is important for understanding the functional diversity of C3 and C4 grasses, and should have implications for how grasslands will respond to global change. © 2012 Blackwell Publishing Ltd.

Validation of behave fire behavior predictions in oak savannas

USGS Publications Warehouse

Grabner, Keith W.; Dwyer, John; Cutter, Bruce E.

1997-01-01

Prescribed fire is a valuable tool in the restoration and management of oak savannas. BEHAVE, a fire behavior prediction system developed by the United States Forest Service, can be a useful tool when managing oak savannas with prescribed fire. BEHAVE predictions of fire rate-of-spread and flame length were validated using four standardized fuel models: Fuel Model 1 (short grass), Fuel Model 2 (timber and grass), Fuel Model 3 (tall grass), and Fuel Model 9 (hardwood litter). Also, a customized oak savanna fuel model (COSFM) was created and validated. Results indicate that standardized fuel model 2 and the COSFM reliably estimate mean rate-of-spread (MROS). The COSFM did not appreciably reduce MROS variation when compared to fuel model 2. Fuel models 1, 3, and 9 did not reliably predict MROS. Neither the standardized fuel models nor the COSFM adequately predicted flame lengths. We concluded that standardized fuel model 2 should be used with BEHAVE when predicting fire rates-of-spread in established oak savannas.

Insects traversing grass-like vertical compliant beams

NASA Astrophysics Data System (ADS)

Li, Chen; Fearing, Ronald; Full, Robert

2014-03-01

Small running animals encounter many challenging terrains. These terrains can be filled with 3D, multi-component obstacles. Here, we study cockroaches (Blaberus discoidalis) moving through grass-like vertical compliant beams during escape. We created an apparatus to control and vary geometric parameters and mechanical properties of model grass including height, width, thickness, lateral and fore-aft spacings, angle, number of layers, stiffness, and damping. We observed a suite of novel locomotor behaviors not previously described on simpler 2D ground. When model grass height was >2 × body length and lateral spacing was <0.5 × body width, the animal primarily (probability P = 50%) rolled its body onto its side to rapidly (time t = 2.1 s) maneuver through the gaps between model grass. We developed a simple energy minimization model, and found that body roll reduces the energy barriers that the animal must overcome during traversal. We hypothesized that the animal's ellipsoidal body shape facilitated traversal. To test our hypothesis, we modified body shape by adding either a rectangular or an oval plate onto its dorsal surface, and found that P dropped by an order of magnitude and t more than doubled. Upon removal of either plate, both P and t recovered. Locomotor kinematics and geometry effectively coupled to terrain properties enables negotiation of 3D, multi-component obstacles, and provides inspiration for small robots to navigate such terrain with minimal sensing and control.

Comparative and Evolutionary Analysis of Grass Pollen Allergens Using Brachypodium distachyon as a Model System.

PubMed

Sharma, Akanksha; Sharma, Niharika; Bhalla, Prem; Singh, Mohan

2017-01-01

Comparative genomics have facilitated the mining of biological information from a genome sequence, through the detection of similarities and differences with genomes of closely or more distantly related species. By using such comparative approaches, knowledge can be transferred from the model to non-model organisms and insights can be gained in the structural and evolutionary patterns of specific genes. In the absence of sequenced genomes for allergenic grasses, this study was aimed at understanding the structure, organisation and expression profiles of grass pollen allergens using the genomic data from Brachypodium distachyon as it is phylogenetically related to the allergenic grasses. Combining genomic data with the anther RNA-Seq dataset revealed 24 pollen allergen genes belonging to eight allergen groups mapping on the five chromosomes in B. distachyon. High levels of anther-specific expression profiles were observed for the 24 identified putative allergen-encoding genes in Brachypodium. The genomic evidence suggests that gene encoding the group 5 allergen, the most potent trigger of hay fever and allergic asthma originated as a pollen specific orphan gene in a common grass ancestor of Brachypodium and Triticiae clades. Gene structure analysis showed that the putative allergen-encoding genes in Brachypodium either lack or contain reduced number of introns. Promoter analysis of the identified Brachypodium genes revealed the presence of specific cis-regulatory sequences likely responsible for high anther/pollen-specific expression. With the identification of putative allergen-encoding genes in Brachypodium, this study has also described some important plant gene families (e.g. expansin superfamily, EF-Hand family, profilins etc) for the first time in the model plant Brachypodium. Altogether, the present study provides new insights into structural characterization and evolution of pollen allergens and will further serve as a base for their functional characterization in related grass species.

Diversity among elephant grass genotypes using Bayesian multi-trait model.

PubMed

Rossi, D A; Daher, R F; Barbé, T C; Lima, R S N; Costa, A F; Ribeiro, L P; Teodoro, P E; Bhering, L L

2017-09-27

Elephant grass is a perennial tropical grass with great potential for energy generation from biomass. The objective of this study was to estimate the genetic diversity among elephant grass accessions based on morpho-agronomic and biomass quality traits and to identify promising genotypes for obtaining hybrids with high energetic biomass production capacity. The experiment was installed at experimental area of the State Agricultural College Antônio Sarlo, in Campos dos Goytacazes. Fifty-two elephant grass genotypes were evaluated in a randomized block design with two replicates. Components of variance and the genotypic means were obtained using a Bayesian multi-trait model. We considered 350,000 iterations in the Gibbs sampler algorithm for each parameter adopted, with a warm-up period (burn-in) of 50,000 Iterations. For obtaining an uncorrelated sample, we considered five iterations (thinning) as a spacing between sampled points, which resulted in a final sample size 60,000. Subsequently, the Mahalanobis distance between each pair of genotypes was estimated. Estimates of genotypic variance indicated a favorable condition for gains in all traits. Elephant grass accessions presented greater variability for biomass quality traits, for which three groups were formed, while for the agronomic traits, two groups were formed. Crosses between Mercker Pinda México x Mercker 86-México, Mercker Pinda México x Turrialba, and Mercker 86-México x Taiwan A-25 can be carried out for obtaining elephant grass hybrids for energy purposes.

Dynamic modeling of the cesium, strontium, and ruthenium transfer to grass and vegetables

DOE Office of Scientific and Technical Information (OSTI.GOV)

Renaud, P.; Real, J.; Maubert, H.

1999-05-01

From 1988 to 1993, the Nuclear Safety and Protection Institute (Institut de Protection et de Surete Nucleaire -- IPSN) conducted experimental programs focused on transfers to vegetation following accidental localized deposits of radioactive aerosols. In relation to vegetable crops (fruit, leaves, and root vegetables) and meadow grass these experiments have enabled a determination of the factors involved in the transfer of cesium, strontium, and ruthenium at successive harvests, or cuttings, in respect of various time lags after contamination. The dynamic modeling given by these results allows an evaluation of changes in the mass activity of vegetables and grass during themore » months following deposit. It constitutes part of the ASTRAL post-accident radioecology model.« less

Spatiotemporal Variation in the Environmental Controls of C4-Grass Origin and Ecology: Insights from Grass-Pollen δ13C Data

NASA Astrophysics Data System (ADS)

Nelson, D. M.; Urban, M.; Hu, F.

2014-12-01

Understanding the environmental factors controlling the origin and shifting abundance of C4 grasses in Earth's history is useful for projecting the response of C4-grass dominated grasslands to future environmental change. Unfortunately, grass pollen is typically morphologically indistinct, making palynological analysis a blunt tool for studying C4-grasses in the paleorecord. δ13C of individual grass-pollen grains using a spooling wire microcombustion device interfaced with an isotope ratio mass spectrometer (Single Pollen Isotope Ratio AnaLysis, SPIRAL) overcomes this challenge and the potential biases of δ13C data from other substrates (e.g. leaf waxes). To assess the presence and relative abundance of C3- and C4-grass pollen in samples of unknown composition, we developed a hierarchical Bayesian model, trained with ~1,900 δ13C values from pollen grains of 31 grass species. Surface-sediment data from Africa, Australia, and North America demonstrate the reliability of this technique for quantifying C4-grass abundance on the landscape. To investigate the timing and control of the origin of C4-grasses we analyzed samples from the Oligocene-Miocene from Europe and from the Eocene from North America. Results indicate that C4 grasses appeared on the landscape of southwest Europe no later than the early Oligocene, implying that low atmospheric pCO2 may not have been the main driver and/or precondition for the development of C4 photosynthesis in the grass family. In contrast, we found no evidence for C4 grasses in the southeast United States before pCO2 fell. In application of SPIRAL to the late Quaternary, we found that shifts in pCO2 and moisture balance exerted key controls on the relative abundance of C3 and C4 grasses in Africa and Australia. Overall, our results imply that as in the past, future changes in the C3/C4 composition of grass-dominated ecosystems will likely exhibit striking spatiotemporal variability as a result of differing combinations of environmental controls.

Experimental Investigation of the Deepening of the Combustion Front into Peat Layers Different in Botanical Composition

NASA Astrophysics Data System (ADS)

Kasymov, D. P.

2017-01-01

The deepening of the center of combustion into peat layers of different botanical compositions (pine-cotton grass and grass-sphagnum peats), typical for the Tomsk region, was investigated experimentally. Peats were ignited from a model ground forest fire initiated by firing of a needle-litter layer. As a result of laboratory investigations, the change in the temperature in the bulk of peat samples with time was determined and analyzed, and the rates of their combustion in the horizontal and vertical directions were estimated. It was established that a fire penetrates deep into a layer of grass-sphagnum peat, containing more than 70% of combustion conductors in its composition, more rapidly as compared to that of pine-cotton grass peat. The rates of combustion of grass-sphagnum peat in the vertical and horizontal directions are larger by 20 and 22%, respectively, than those of pine-cotton grass peat, which is evidently due to the botanical composition of grass-sphagnum peat and the random arrangement of components in its layers.

A grass-fire cycle eliminates an obligate-seeding tree in a tropical savanna.

PubMed

Bowman, David M J S; MacDermott, Harry J; Nichols, Scott C; Murphy, Brett P

2014-11-01

A grass-fire cycle in Australian tropical savannas has been postulated as driving the regional decline of the obligate-seeding conifer Callitris intratropica and other fire-sensitive components of the regional flora and fauna, due to proliferation of flammable native grasses. We tested the hypothesis that a high-biomass invasive savanna grass drives a positive feedback process where intense fires destroy fire-sensitive trees, and the reduction in canopy cover facilitates further invasion by grass. We undertook an observational and experimental study using, as a model system, a plantation of C. intratropica that has been invaded by an African grass, gamba (Andropogon gayanus) in the Northern Territory, Australia. We found that high grass biomass was associated with reduced canopy cover and restriction of foliage to the upper canopy of surviving stems, and mortality of adult trees was very high (>50%) even in areas with low fuel loads (1 t·ha(-1)). Experimental fires, with fuel loads >10 t·ha(-1), typical of the grass-invasion front, caused significant mortality due to complete crown scorch. Lower fuel loads cause reduced canopy cover through defoliation of the lower canopy. These results help explain how increases in grass biomass are coupled with the decline of C. intratropica throughout northern Australia by causing a switch from litter and sparse perennial grass fuels, and hence low-intensity surface fires, to heavy annual grass fuel loads that sustain fires that burn into the midstorey. This study demonstrates that changes in fuel type can alter fire regimes with substantial knock-on effects on the biota.

Complexity in African savannas: Direct, indirect, and cascading effects of animal densities, rainfall and vegetation availability

PubMed Central

Leeuwis, Tim; Peel, Mike

2018-01-01

Savanna ecosystems are popular subjects for interaction studies. Multiple studies have been done on the impact of elephants on vegetation, the impact of grass and browse availability on animal densities or on competition between herbivore species. Previous studies showed that elephant densities are frequently negatively correlated with densities of tall trees, and that browse and grass availability are correlated with browser and grazer density respectively. Additionally, a competition effect between browse and grass availability has been reported. These relationships are usually analysed by testing direct relationships between e.g., herbivore densities and food availability, without addressing competition effects or other indirect effects. In this study, multiple interactions in a savanna system have been analysed simultaneously using Partial Least Square-Path Modelling (PLS-PM) using mammal and vegetation data from three different wildlife reserves in southern KwaZulu-Natal. The results showed that the processes that three separate models for the three areas provided the best understanding of the importance of the different interactions. These models suggest that elephants had a negative impact on trees, but also on grass availability. The impact is stronger when elephants are not able to migrate during the dry season. Browsers and grazers were correlated with browse and grass availability, but competition between browse and grass was not detected. This study shows that due to the complexity of the interactions in an ecosystem and differences in environmental factors, these interactions are best studied per area. PLS-PM can be a useful tool for estimating direct, indirect, and cascading effects of changing animal densities in conservation areas. PMID:29768481

Estimates of spatial and temporal variation of energy crops biomass yields in the US

NASA Astrophysics Data System (ADS)

Song, Y.; Jain, A. K.; Landuyt, W.; Kheshgi, H. S.

2013-12-01

Perennial grasses, such as switchgrass (Panicum viragatum) and Miscanthus (Miscanthus x giganteus) have been identified for potential use as biomass feedstocks in the US. Current research on perennial grass biomass production has been evaluated on small-scale plots. However, the extent to which this potential can be realized at a landscape-scale will depend on the biophysical potential to grow these grasses with minimum possible amount of land that needs to be diverted from food to fuel production. To assess this potential three questions about the biomass yield for these grasses need to be answered: (1) how the yields for different grasses are varied spatially and temporally across the US; (2) whether the yields are temporally stable or not; and (3) how the spatial and temporal trends in yields of these perennial grasses are controlled by limiting factors, including soil type, water availability, climate, and crop varieties. To answer these questions, the growth processes of the perennial grasses are implemented into a coupled biophysical, physiological and biogeochemical model (ISAM). The model has been applied to quantitatively investigate the spatial and temporal trends in biomass yields for over the period 1980 -2010 in the US. The bioenergy grasses considered in this study include Miscanthus, Cave-in-Rock switchgrass and Alamo switchgrass. The effects of climate, soil and topography on the spatial and temporal trends of biomass yields are quantitatively analyzed using principal component analysis and GIS based geographically weighted regression. The spatial temporal trend results are evaluated further to classify each part of the US into four homogeneous potential yield zones: high and stable yield zone (HS), high but unstable yield zone (HU), low and stable yield zone (LS) and low but unstable yield zone (LU). Our preliminary results indicate that the yields for perennial grasses among different zones are strongly related to the different controlling factors. For example, the yield in HS zone is depended on soil and topography factors. However, the yields in HU zone are more controlled by climate factors, leading to a large uncertainty in yield potential of bioenergy grasses under future climate change.

Applying operational research and data mining to performance based medical personnel motivation system.

PubMed

Niaksu, Olegas; Zaptorius, Jonas

2014-01-01

This paper presents the methodology suitable for creation of a performance related remuneration system in healthcare sector, which would meet requirements for efficiency and sustainable quality of healthcare services. Methodology for performance indicators selection, ranking and a posteriori evaluation has been proposed and discussed. Priority Distribution Method is applied for unbiased performance criteria weighting. Data mining methods are proposed to monitor and evaluate the results of motivation system.We developed a method for healthcare specific criteria selection consisting of 8 steps; proposed and demonstrated application of Priority Distribution Method for the selected criteria weighting. Moreover, a set of data mining methods for evaluation of the motivational system outcomes was proposed. The described methodology for calculating performance related payment needs practical approbation. We plan to develop semi-automated tools for institutional and personal performance indicators monitoring. The final step would be approbation of the methodology in a healthcare facility.

Setaria viridis and Setaria italica, model genetic systems for the Panicoid grasses.

PubMed

Li, Pinghua; Brutnell, Thomas P

2011-05-01

Setaria italica and its wild ancestor Setaria viridis are diploid C(4) grasses with small genomes of ∼515 Mb. Both species have attributes that make them attractive as model systems. Setaria italica is a grain crop widely grown in Northern China and India that is closely related to the major food and feed crops maize and sorghum. A large collection of S. italica accessions are available and thus opportunities exist for association mapping and allele mining for novel variants that will have direct application in agriculture. Setaria viridis is the weedy relative of S. italica with many attributes suitable for genetic analyses including a small stature, rapid life cycle, and prolific seed production. Setaria sp. are morphologically similar to most of the Panicoideae grasses, including major biofuel feedstocks, switchgrass (Panicum virgatum) and Miscanthus (Miscanthus giganteus). They are broadly distributed geographically and occupy diverse ecological niches. The cross-compatibility of S. italica and S. viridis also suggests that gene flow is likely between wild and domesticated accessions. In addition to serving as excellent models for C(4) photosynthesis, these grasses provide novel opportunities to study abiotic stress tolerance and as models for bioenergy feedstocks.

[Mechanisms of grass in slope erosion control in Loess sandy soil region of Northwest China].

PubMed

Zhao, Chun-Hong; Gao, Jian-En; Xu, Zhen

2013-01-01

By adopting the method of simulated precipitation and from the viewpoint of slope hydrodynamics, in combining with the analysis of soil resistance to erosion, a quantitative study was made on the mechanisms of grass in controlling the slope erosion in the cross area of wind-water erosion in Loess Plateau of Northwest China under different combinations of rainfall intensity and slope gradient, aimed to provide basis to reveal the mechanisms of vegetation in controlling soil erosion and to select appropriate vegetation for the soil and water conservation in Loess Plateau. The grass Astragalus adsurgens with the coverage about 40% could effectively control the slope erosion. This grass had an efficiency of more than 70% in reducing sediment, and the grass root had a greater effect than grass canopy. On bare slope and on the slopes with the grass plant or only the grass root playing effect, there existed a functional relation between the flow velocity on the slopes and the rainfall intensity and slope gradient (V = DJ(0.33 i 0.5), where V is flow velocity, D is the comprehensive coefficient which varies with different underlying surfaces, i is rainfall intensity, and J is slope gradient). Both the grass root and the grass canopy could markedly decrease the flow velocity on the slopes, and increase the slope resistance, but the effect of grass root in decreasing flow velocity was greater while the effect in increasing resistance was smaller than that of grass canopy. The effect of grass root in increasing slope resistance was mainly achieved by increasing the sediment grain resistance, while the effect of canopy was mainly achieved by increasing the slope form resistance and wave resistance. The evaluation of the soil resistance to erosion by using a conceptual model of sediment generation by overland flow indicated that the critical shear stress value of bare slope and of the slopes with the grass plant or only the grass root playing effect was 0.533, 1.672 and 0.925 Pa, respectively.

Prediction of genetic gains by selection indices using mixed models in elephant grass for energy purposes.

PubMed

Silva, V B; Daher, R F; Araújo, M S B; Souza, Y P; Cassaro, S; Menezes, B R S; Gravina, L M; Novo, A A C; Tardin, F D; Júnior, A T Amaral

2017-09-27

Genetically improved cultivars of elephant grass need to be adapted to different ecosystems with a faster growth speed and lower seasonality of biomass production over the year. This study aimed to use selection indices using mixed models (REML/BLUP) for selecting families and progenies within full-sib families of elephant grass (Pennisetum purpureum) for biomass production. One hundred and twenty full-sib progenies were assessed from 2014 to 2015 in a randomized block design with three replications. During this period, the traits dry matter production, the number of tillers, plant height, stem diameter, and neutral detergent fiber were assessed. Families 3 and 1 were the best classified, being the most indicated for selection effect. Progenies 40, 45, 46, and 49 got the first positions in the three indices assessed in the first cut. The gain for individual 40 was 161.76% using Mulamba and Mock index. The use of selection indices using mixed models is advantageous in elephant grass since they provide high gains with the selection, which are distributed among all the assessed traits in the most appropriate situation to breeding programs.

Health economic comparison of SLIT allergen and SCIT allergoid immunotherapy in patients with seasonal grass-allergic rhinoconjunctivitis in Germany.

PubMed

Verheggen, Bram G; Westerhout, Kirsten Y; Schreder, Carl H; Augustin, Matthias

2015-01-01

Allergoids are chemically modified allergen extracts administered to reduce allergenicity and to maintain immunogenicity. Oralair® (the 5-grass tablet) is a sublingual native grass allergen tablet for pre- and co-seasonal treatment. Based on a literature review, meta-analysis, and cost-effectiveness analysis the relative effects and costs of the 5-grass tablet versus a mix of subcutaneous allergoid compounds for grass pollen allergic rhinoconjunctivitis were assessed. A Markov model with a time horizon of nine years was used to assess the costs and effects of three-year immunotherapy treatment. Relative efficacy expressed as standardized mean differences was estimated using an indirect comparison on symptom scores extracted from available clinical trials. The Rhinitis Symptom Utility Index (RSUI) was applied as a proxy to estimate utility values for symptom scores. Drug acquisition and other medical costs were derived from published sources as well as estimates for resource use, immunotherapy persistence, and occurrence of asthma. The analysis was executed from the German payer's perspective, which includes payments of the Statutory Health Insurance (SHI) and additional payments by insurants. Comprehensive deterministic and probabilistic sensitivity analyses and different scenarios were performed to test the uncertainty concerning the incremental model outcomes. The applied model predicted a cost-utility ratio of the 5-grass tablet versus a market mix of injectable allergoid products of € 12,593 per QALY in the base case analysis. Predicted incremental costs and QALYs were € 458 (95% confidence interval, CI: € 220; € 739) and 0.036 (95% CI: 0.002; 0.078), respectively. Compared to the allergoid mix the probability of the 5-grass tablet being the most cost-effective treatment option was predicted to be 76% at a willingness-to-pay threshold of € 20,000. The results were most sensitive to changes in efficacy estimates, duration of the pollen season, and immunotherapy persistence rates. This analysis suggests the sublingual native 5-grass tablet to be cost-effective relative to a mix of subcutaneous allergoid compounds. The robustness of these statements has been confirmed in extensive sensitivity and scenario analyses.

Brachypodium distachyon as a new model system for understanding iron homeostasis in grasses: phylogenetic and expression analysis of Yellow Stripe-Like (YSL) transporters

PubMed Central

Yordem, Burcu K.; Conte, Sarah S.; Ma, Jian Feng; Yokosho, Kengo; Vasques, Kenneth A.; Gopalsamy, Srinivasa N.; Walker, Elsbeth L.

2011-01-01

Background and Aims Brachypodium distachyon is a temperate grass with a small stature, rapid life cycle and completely sequenced genome that has great promise as a model system to study grass-specific traits for crop improvement. Under iron (Fe)-deficient conditions, grasses synthesize and secrete Fe(III)-chelating agents called phytosiderophores (PS). In Zea mays, Yellow Stripe1 (ZmYS1) is the transporter responsible for the uptake of Fe(III)–PS complexes from the soil. Some members of the family of related proteins called Yellow Stripe-Like (YSL) have roles in internal Fe translocation of plants, while the function of other members remains uninvestigated. The aim of this study is to establish brachypodium as a model system to study Fe homeostasis in grasses, identify YSL proteins in brachypodium and maize, and analyse their expression profiles in brachypodium in response to Fe deficiency. Methods The YSL family of proteins in brachypodium and maize were identified based on sequence similarity to ZmYS1. Expression patterns of the brachypodium YSL genes (BdYSL genes) were determined by quantitative RT–PCR under Fe-deficient and Fe-sufficient conditions. The types of PS secreted, and secretion pattern of PS in brachypodium were analysed by high-performance liquid chromatography. Key Results Eighteen YSL family members in maize and 19 members in brachypodium were identified. Phylogenetic analysis revealed that some YSLs group into a grass-specific clade. The Fe status of the plant can regulate expression of brachypodium YSL genes in both shoots and roots. 3-Hydroxy-2′-deoxymugineic acid (HDMA) is the dominant type of PS secreted by brachypodium, and its secretion is diurnally regulated. Conclusions PS secretion by brachypodium parallels that of related crop species such as barley and wheat. A single grass species-specific YSL clade is present, and expression of the BdYSL members of this clade could not be detected in shoots or roots, suggesting grass-specific functions in reproductive tissues. Finally, the Fe-responsive expression profiles of several YSLs suggest roles in Fe homeostasis. PMID:21831857

Tree-grass phenology information improves light use efficiency modelling of gross primary productivity for an Australian tropical savanna

NASA Astrophysics Data System (ADS)

Moore, Caitlin E.; Beringer, Jason; Evans, Bradley; Hutley, Lindsay B.; Tapper, Nigel J.

2017-01-01

The coexistence of trees and grasses in savanna ecosystems results in marked phenological dynamics that vary spatially and temporally with climate. Australian savannas comprise a complex variety of life forms and phenologies, from evergreen trees to annual/perennial grasses, producing a boom-bust seasonal pattern of productivity that follows the wet-dry seasonal rainfall cycle. As the climate changes into the 21st century, modification to rainfall and temperature regimes in savannas is highly likely. There is a need to link phenology cycles of different species with productivity to understand how the tree-grass relationship may shift in response to climate change. This study investigated the relationship between productivity and phenology for trees and grasses in an Australian tropical savanna. Productivity, estimated from overstory (tree) and understory (grass) eddy covariance flux tower estimates of gross primary productivity (GPP), was compared against 2 years of repeat time-lapse digital photography (phenocams). We explored the phenology-productivity relationship at the ecosystem scale using Moderate Resolution Imaging Spectroradiometer (MODIS) vegetation indices and flux tower GPP. These data were obtained from the Howard Springs OzFlux/Fluxnet site (AU-How) in northern Australia. Two greenness indices were calculated from the phenocam images: the green chromatic coordinate (GCC) and excess green index (ExG). These indices captured the temporal dynamics of the understory (grass) and overstory (trees) phenology and were correlated well with tower GPP for understory (r2 = 0.65 to 0.72) but less so for the overstory (r2 = 0.14 to 0.23). The MODIS enhanced vegetation index (EVI) correlated well with GPP at the ecosystem scale (r2 = 0.70). Lastly, we used GCC and EVI to parameterise a light use efficiency (LUE) model and found it to improve the estimates of GPP for the overstory, understory and ecosystem. We conclude that phenology is an important parameter to consider in estimating GPP from LUE models in savannas and that phenocams can provide important insights into the phenological variability of trees and grasses.

Systems Level Engineering of Plant Cell Wall Biosynthesis to Improve Biofuel Feedstock Quality

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hazen, Samuel

2013-09-27

Our new regulatory model of cell wall biosynthesis proposes original network architecture with several newly incorporated components. The mapped set of protein-DNA interactions will serve as a foundation for 1) understanding the regulation of a complex and integral plant component and 2) the manipulation of crop species for biofuel and biotechnology purposes. This study revealed interesting and novel aspects of grass growth and development and further enforce the importance of a grass model system. By functionally characterizing a suite of genes, we have begun to improve the sparse model for transcription regulation of biomass accumulation in grasses. In the process,more » we have advanced methodology and brachy molecular genetic tools that will serve as valuable community resource.« less

Magnitude of efficacy measurements in grass allergy immunotherapy trials is highly dependent on pollen exposure.

PubMed

Durham, S R; Nelson, H S; Nolte, H; Bernstein, D I; Creticos, P S; Li, Z; Andersen, J S

2014-05-01

The objective was to evaluate the association between grass pollen exposure, allergy symptoms and impact on measured treatment effect after grass sublingual immunotherapy (SLIT)-tablet treatment. The association between grass pollen counts and total combined rhinoconjunctivitis symptom and medication score (TCS) was based on a post hoc analysis of data collected over six trials and seven grass pollen seasons across North America and Europe, including 2363 subjects treated with grass SLIT-tablet or placebo. Daily pollen counts were obtained from centralized pollen databases. The effect of treatment on the relationship between the TCS and pollen counts was investigated, and the relative difference between grass SLIT-tablet and placebo as a function of average grass pollen counts was modelled by linear regression. The magnitude of treatment effect based on TCS was greater with higher pollen exposure (P < 0.001). The relative treatment effect in terms of TCS for each trial was correlated with the average grass pollen exposure during the first period of the season, with predicted reduction in TCS = 12% + 0.35% × pollen count (slope significantly different from 0, P = 0.003; R(2)  = 0.66). Corresponding correlations to the entire grass pollen season and to the peak season were equally good, whereas there was a poor correlation between difference in measured efficacy and pollen exposure during the last part of the season. In seasonal allergy trials with grass SLIT-tablet, the observed treatment effect is highly dependent on pollen exposure with the magnitude being greater with higher pollen exposure. This is an important relationship to consider when interpreting individual clinical trial results. © 2014 The Authors. Allergy Published by John Wiley & Sons Ltd.

Magnitude of efficacy measurements in grass allergy immunotherapy trials is highly dependent on pollen exposure

PubMed Central

Durham, S R; Nelson, H S; Nolte, H; Bernstein, D I; Creticos, P S; Li, Z; Andersen, J S

2014-01-01

Background The objective was to evaluate the association between grass pollen exposure, allergy symptoms and impact on measured treatment effect after grass sublingual immunotherapy (SLIT)-tablet treatment. Methods The association between grass pollen counts and total combined rhinoconjunctivitis symptom and medication score (TCS) was based on a post hoc analysis of data collected over six trials and seven grass pollen seasons across North America and Europe, including 2363 subjects treated with grass SLIT-tablet or placebo. Daily pollen counts were obtained from centralized pollen databases. The effect of treatment on the relationship between the TCS and pollen counts was investigated, and the relative difference between grass SLIT-tablet and placebo as a function of average grass pollen counts was modelled by linear regression. Results The magnitude of treatment effect based on TCS was greater with higher pollen exposure (P < 0.001). The relative treatment effect in terms of TCS for each trial was correlated with the average grass pollen exposure during the first period of the season, with predicted reduction in TCS = 12% + 0.35% × pollen count (slope significantly different from 0, P = 0.003; R2 = 0.66). Corresponding correlations to the entire grass pollen season and to the peak season were equally good, whereas there was a poor correlation between difference in measured efficacy and pollen exposure during the last part of the season. Conclusions In seasonal allergy trials with grass SLIT-tablet, the observed treatment effect is highly dependent on pollen exposure with the magnitude being greater with higher pollen exposure. This is an important relationship to consider when interpreting individual clinical trial results. PMID:24605984

The role of seasonal grass pollen on childhood asthma emergency department presentations.

PubMed

Erbas, B; Akram, M; Dharmage, S C; Tham, R; Dennekamp, M; Newbigin, E; Taylor, P; Tang, M L K; Abramson, M J

2012-05-01

Few studies have focused on the role of grass pollen on asthma emergency department (ED) presentations among children. None have examined whether a dose-response effect exists between grass pollen levels and these asthma exacerbations. To examine the association between increasing ambient levels of grass pollen and asthma ED presentations in children. To determine whether these associations are seen only after a thunderstorm, or whether grass pollen levels have a consistent influence on childhood asthma ED visits during the season. A short time series ecological study was conducted for asthma presentations to ED among children in Melbourne, Victoria, and grass pollen, meteorological and air quality measurements recorded during the selected 2003 period. A semi-parametric Poisson regression model was used to examine dose-response associations between daily grass pollen levels and mean daily ED attendance for asthma. A smoothed plot suggested a dose-response association. As ambient grass pollen increased to about 19 grains/m(3) , the same day risk of childhood ED presentations also increased linearly (P < 0.001). Grass pollen levels were also associated with an increased risk in asthma ED presentations on the following day (lag 1, P < 0.001). This is the first study to establish a clear relationship between increased risk of childhood asthma ED attendance and levels of ambient grass pollen below 20 grains/m(3) , independent of any impact of thunderstorm-associated asthma. These findings have important implications for patient care, such as asthma management programs that notify the general public regarding periods of high grass pollen exposure, as well as defining the timing of initiation of pollen immunotherapy. © 2012 Blackwell Publishing Ltd.

Grass carp in the Great Lakes region: establishment potential, expert perceptions, and re-evaluation of experimental evidence of ecological impact

USGS Publications Warehouse

Wittmann, Marion E.; Jerde, Christopher L.; Howeth, Jennifer G.; Maher, Sean P.; Deines, Andrew M.; Jenkins, Jill A.; Whitledge, Gregory W.; Burbank, Sarah B.; Chadderton, William L.; Mahon, Andrew R.; Tyson, Jeffrey T.; Gantz, Crysta A.; Keller, Reuben P.; Drake, John M.; Lodge, David M.

2014-01-01

Intentional introductions of nonindigenous fishes are increasing globally. While benefits of these introductions are easily quantified, assessments to understand the negative impacts to ecosystems are often difficult, incomplete, or absent. Grass carp (Ctenopharyngodon idella) was originally introduced to the United States as a biocontrol agent, and recent observations of wild, diploid individuals in the Great Lakes basin have spurred interest in re-evaluating its ecological risk. Here, we evaluate the ecological impact of grass carp using expert opinion and a suite of the most up-to-date analytical tools and data (ploidy assessment, eDNA surveillance, species distribution models (SDMs), and meta-analysis). The perceived ecological impact of grass carp by fisheries experts was variable, ranging from unknown to very high. Wild-caught triploid and diploid individuals occurred in multiple Great Lakes waterways, and eDNA surveillance suggests that grass carp are abundant in a major tributary of Lake Michigan. SDMs predicted suitable grass carp climate occurs in all Great Lakes. Meta-analysis showed that grass carp introductions impact both water quality and biota. Novel findings based on updated ecological impact assessment tools indicate that iterative risk assessment of introduced fishes may be warranted.

Comparative and Evolutionary Analysis of Grass Pollen Allergens Using Brachypodium distachyon as a Model System

PubMed Central

Sharma, Akanksha; Sharma, Niharika; Bhalla, Prem; Singh, Mohan

2017-01-01

Comparative genomics have facilitated the mining of biological information from a genome sequence, through the detection of similarities and differences with genomes of closely or more distantly related species. By using such comparative approaches, knowledge can be transferred from the model to non-model organisms and insights can be gained in the structural and evolutionary patterns of specific genes. In the absence of sequenced genomes for allergenic grasses, this study was aimed at understanding the structure, organisation and expression profiles of grass pollen allergens using the genomic data from Brachypodium distachyon as it is phylogenetically related to the allergenic grasses. Combining genomic data with the anther RNA-Seq dataset revealed 24 pollen allergen genes belonging to eight allergen groups mapping on the five chromosomes in B. distachyon. High levels of anther-specific expression profiles were observed for the 24 identified putative allergen-encoding genes in Brachypodium. The genomic evidence suggests that gene encoding the group 5 allergen, the most potent trigger of hay fever and allergic asthma originated as a pollen specific orphan gene in a common grass ancestor of Brachypodium and Triticiae clades. Gene structure analysis showed that the putative allergen-encoding genes in Brachypodium either lack or contain reduced number of introns. Promoter analysis of the identified Brachypodium genes revealed the presence of specific cis-regulatory sequences likely responsible for high anther/pollen-specific expression. With the identification of putative allergen-encoding genes in Brachypodium, this study has also described some important plant gene families (e.g. expansin superfamily, EF-Hand family, profilins etc) for the first time in the model plant Brachypodium. Altogether, the present study provides new insights into structural characterization and evolution of pollen allergens and will further serve as a base for their functional characterization in related grass species. PMID:28103252

Thermal and Hydraulic Conditions Supporting the Recruitment of Asian Carp in Seiche Affected Rivers of Lake Erie Basin - A Case Study of the Lower Sandusky River in Ohio

NASA Astrophysics Data System (ADS)

Soong, D. T.; Santacruz, S.; Jones, L.; Garcia, T.; Kočovský, P. M.; Embke, H.

2017-12-01

Grass Carp Ctenopharyngodon idella (Cyprinidae) is an invasive fish species that spawns in rivers during high-flow events. In their native range, it is believed eggs must hatch within the riverine environment in order to eventually result in production of adult fish. The lower Sandusky River is approximately 26 km long extending from its confluence with Sandusky Bay upstream to the Ballville Dam, which is impassible for Grass Carp. Grass Carp are known to have spawned in the Sandusky River, a tributary to Lake Erie, in 2011, 2013, 2015, and 2017. This study characterizes the thermal and hydraulic conditions under which these eggs could hatch in the lower Sandusky River, a relatively short river reach for egg hatching. Grass Carp eggs collected in 2015 were previously analyzed for hatching locations using a one-dimensional steady-state HEC-RAS hydraulic model. In this study we refine estimates of hatching locations by incorporating the influence of fluctuating water levels downstream due to seiches in Lake Erie and overland and tributary inflows using an unsteady 1D/2D HEC-RAS hydraulic model. Additionally, conditions conducive to successful hatching, which occurs when eggs reach the hatching stage within the river, were analyzed from nine high-flow events between 2011 and 2015. Simulated hydraulic and water temperature data were used as inputs to the Fluvial Egg Drift Simulator (FluEgg) model, which was used to analyze the transport and dispersal of Grass carp eggs until hatching. We will describe the differences in steady- and unsteady-state hydraulic modeling in predicting hatching locations of Grass Carp eggs for the 2015 spawning events. Results will also include hydraulic and temperature variables that contribute to the successful/unsuccessful in-river hatching for the nine flow events simulated.

Exploiting the Brachypodium Tool Box in cereal and grass research

USDA-ARS?s Scientific Manuscript database

It is now a decade since Brachypodium distachyon was suggested as a model species for temperate grasses and cereals. Since then transformation protocols, large expressed sequence tag (EST) populations, tools for forward and reverse genetic screens, highly refined cytogenetic probes, germplasm coll...

Quantitative trait loci associated with drought tolerance in brachypodium distachyon

USDA-ARS?s Scientific Manuscript database

The temperate wild grass Brachypodium distachyon (Brachypodium) serves as model system for studying turf and forage grasses. Brachypodium collections show diverse responses to drought stress, but little is known about the genetic mechanisms of drought tolerance of this species. The objective of this...

Switchgrass for forage and bioenergy

USDA-ARS?s Scientific Manuscript database

Switchgrass is a native warm-season grass that has been used for hay, forage, and conservation purposes for decades and switchgrass research in Nebraska has been ongoing since 1936. Recently, switchgrass has been identified as a model perennial grass for bioenergy in the Great Plains and Midwest. Si...

A multiscale assessment of tree avoidance by prairie birds

USGS Publications Warehouse

Thompson, Sarah J.; Arnold, Todd W.; Amundson, Courtney L.

2014-01-01

In North America, grassland bird abundances have declined, likely as a result of loss and degradation of prairie habitat. Given the expense and limited opportunity to procure new grasslands, managers are increasingly focusing on ways to improve existing habitat for grassland birds, using techniques such as tree removal. To examine the potential for tree removal to benefit grassland birds, we conducted 446 point counts on 35 grassland habitat patches in the highly fragmented landscape of west-central Minnesota during 2009–2011. We modeled density of four grassland bird species in relation to habitat composition at multiple scales, focusing on covariates that described grass, woody vegetation (trees and large shrubs), or combinations of grass and woody vegetation. The best-supported models for all four grassland bird species incorporated variables measured at multiple scales, including local features such as grass height, litter depth, and local tree abundance, as well as landscape-level measures of grass and tree cover. Savannah Sparrows (Passerculus sandwichensis), Sedge Wrens (Cistothorus platensis), and Bobolinks (Dolichonyx oryzivorus) responded consistently and negatively to woody vegetation, but response to litter depth, grass height, and grassland extent were mixed among species. Our results suggest that reducing shrub and tree cover is more likely to increase the density of grassland birds than are attempts to improve grass quality or quantity. In particular, tree removal is more likely to increase density of Savannah Sparrows and Sedge Wrens than any reasonable changes in grass quality or quantity. Yet tree removal may not result in increased abundance of grassland birds if habitat composition is not considered at multiple scales. Managers will need to either manage at large scales (80–300 ha) or focus their efforts on removing trees in landscapes that contain some grasslands but few nearby wooded areas.

Changes of the Shrub/Grass balance under Climate Change: Mechanisms and Consequences

NASA Astrophysics Data System (ADS)

Sala, O.; Gherardi, L.; Anadon, J.

2016-12-01

Most arid and semiarid ecosystems are made up of grasses and shrubs; and their balance could be altered by changes in climate, fire and grazing among others. Here, we focus on the effects of climate change on the shrub/grass balance and the mechanisms mediating alterations of the balance. We assess hypotheses that state that climate change affects shrub/grass balance by affecting the distribution of soil water in the profile. We report on studies that range from the plot to the sub-continental scale using manipulative experiments, simulation modelling and remote sensing tools. Specifically, we evaluate the effect of amount of precipitation on the shrub/grass balance. In Chihuahuan desert ecosystems, prolonged drought drove shrub encroachment as a result of a-symmetric competition between shrubs and grasses. Demise of shallow-rooted grasses after prolonged drought resulted in an increase in soil-water resources for deep-rooted shrubs. We also quantitatively assessed the effect of changes in shrub/grass balance on the provisioning of ecosystem services in North and South America. In both regions, woody-plant encroachment reduced livestock production, which is the main ecosystem service provided by drylands. However, the effect of woody-plant encroachment had a larger impact in South than North America. The differential effect of changes in the shrub/balance was mediated by differences in the demand of ecosystem services.

Prediction of enteric methane emissions from sheep offered fresh perennial ryegrass () using data measured in indirect open-circuit respiration chambers.

PubMed

Zhao, Y G; O'Connell, N E; Yan, T

2016-06-01

Development of effective methane (CH) mitigation strategies for grazing sheep requires accurate prediction tools. The present study aimed to identify key parameters influencing enteric CH emissions and develop prediction equations for enteric CH emissions from sheep offered fresh grass. The data used were collected from 82 sheep offered fresh perennial ryegrass () as sole diets in 6 metabolism experiments (data from non-grass-only diets were not used). Sheep were from breeds of Highlander, Texel, Scottish Blackface, and Swaledale at the age of 5 to 18 mo and weighing from 24.5 to 62.7 kg. Grass was harvested daily from 6 swards on contrasting harvest dates (May to December). Before the commencement of each study, the experimental sward was harvested at a residual height of 4 cm and allowed to grow for 2 to 4 wk. The feeding trials commenced when the grass sward was suitable to zero grazing (average grass height = 15 cm), thus offering grass of a quality similar to what grazing animals would receive under routine grazing management. Sheep were housed in individual pens for 14 d and then moved to individual calorimeter chambers for 4 d. Feed intake, fecal and urine outputs, and CH emissions were measured during the final 4 d. Data were analyzed using the REML procedure to develop prediction equations for CH emissions. Linear and multiple prediction equations were developed using BW, DMI, GE intake (GEI), and grass chemical concentrations (DM, OM, water-soluble carbohydrates [WSC], NDF, ADF, nitrogen [N], GE, DE, and ME) as explanatory variables. The mean CH production was 21.1 g/kg DMI or 0.062 MJ/MJ GEI. Dry matter intake and GEI were much more accurate predictors for CH emissions than BW ( < 0.001, = 0.86 and = 0.87 vs. = 0.09, respectively). Adding grass DE and ME concentrations and grass nutrient concentrations (e.g., OM, N, GE, NDF, and WSC) to the relationships between DMI or GEI and CH emissions improved prediction accuracy with values increased to 0.93. Models based on farm-level data, for example, BW and grass nutrient (i.e., DM, GE, OM, and N) concentrations, were also developed and performed satisfactorily ( < 0.001, = 0.63). These models can contribute to improve prediction accuracy for enteric CH emissions from sheep grazing on ryegrass pasture.

Composition and design of vegetative filter strips instrumental in improving water quality by mass reduction of suspended sediment, nutrients and Escherichia coli in overland flows in eastern escarpment of Mau Forest, Njoro River Watershed, Kenya

PubMed Central

Olilo, C. O.; Onyando, J. O.; Moturi, W. N.; Muia, A. W.; Roegner, Amber F.; Ogari, Z.; Ombui, P. N.; Shivoga, W. A.

2016-01-01

This study assessed the effect of vegetative filter strip (VFS) in removal of suspended sediment (SS), total nitrogen, total phosphorus and Escherichia coli (E. coli) in overland flow to improve receiving water quality standards. Four and half kilograms of cowpat manure was applied to the model pasture 14 m beyond the edge of vegetated filter strip (VFS) comprising 10-m Napier grass draining into 20-m Kikuyu grass (VFS II), 10-m Kikuyu grass draining into 20-m Napier grass (VFS III) and native grass mixture of Couch–Buffel (VFS I-control). Overland flow water samples were collected from the sites at positions 0, 0.5, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 15, 20, 25 and 30 m along the length of VFSs. E. coli removal by Napier grass VFS was on the order of log unit, which provided an important level of protection and reduced surface-flow concentrations of E. coli to below the 200 (CFU 100 mL−1) recommended water quality standards, but not for nutrients and SS. The Napier grass showed highest efficiency (99.6 %), thus outperforming both Kikuyu grass (85.8 %) and Couch–Buffel grasses VFS (67.9 ± 4.2 %) in removing E. coli from overland flow. The low-level efficiency of native Couch–Buffel grasses in reducing E. coli in overland flow was because of preferential flow. Composition and design of VFS was instrumental and could be applied with a high potential of contracting the uncertainty in improving water quality standards through mass reduction of SS, nutrients and E. coli load in watersheds. PMID:28133624

Belowground impacts of perennial grass cultivation for sustainable biofuel feedstock production in the tropics

DOE PAGES

Sumiyoshi, Yudai; Crow, Susan E.; Litton, Creighton M.; ...

2016-07-08

Perennial grasses can sequester soil organic carbon (SOC) in sustainably managed biofuel systems, directly mitigating atmospheric CO 2 concentrations while simultaneously generating biomass for renewable energy. Our objective was to quantify SOC accumulation and identify the primary drivers of belowground C dynamics in a zero-tillage production system of tropical perennial C4 grasses grown for biofuel feedstock in Hawaii. Specifically, the quantity, quality, and fate of soil C inputs were determined for eight grass accessions – four varieties each of napier grass and guinea grass. Carbon fluxes (soil CO 2 efflux, aboveground net primary productivity, litterfall, total belowground carbon flux, rootmore » decay constant), C pools (SOC pool and root biomass), and C quality (root chemistry, C and nitrogen concentrations, and ratios) were measured through three harvest cycles following conversion of a fallow field to cultivated perennial grasses. A wide range of SOC accumulation occurred, with both significant species and accession effects. Aboveground biomass yield was greater, and root lignin concentration was lower for napier grass than guinea grass. Structural equation modeling revealed that root lignin concentration was the most important driver of SOC pool: varieties with low root lignin concentration, which was significantly related to rapid root decomposition, accumulated the greatest amount of SOC. Roots with low lignin concentration decomposed rapidly, but the residue and associated microbial biomass/by-products accumulated as SOC. In general, napier grass was better suited for promoting soil C sequestration in this system. Further, high-yielding varieties with low root lignin concentration provided the greatest climate change mitigation potential in a ratoon system. By understanding the factors affecting SOC accumulation and the net greenhouse gas trade-offs within a biofuel production system will aid in crop selection to meet multiple goals toward environmental and economic sustainability.« less

Immunochemical Analysis of Paxilline and Ergot Alkaloid Mycotoxins in Grass Seeds and Plants.

PubMed

Bauer, Julia I; Gross, Madeleine; Cramer, Benedikt; Humpf, Hans-Ulrich; Hamscher, Gerd; Usleber, Ewald

2018-01-10

Limited availability of toxin standards for lolitrem B and ergovaline impedes routine control of grasses for endophyte toxins. This study aimed at assessing the applicability of an enzyme immunoassay (EIA) for the indole-diterpene mycotoxin paxilline, in combination with a generic EIA for ergot alkaloids, as alternative parameters for screening purposes. Analysis of grass seeds and model pastures of four different grass species showed that both EIAs yielded highly positive results for paxilline and ergot alkaloids in perennial ryegrass seeds. Furthermore, evidence for natural occurrence of paxilline in grass in Germany was obtained. High performance liquid chromatography-tandem mass spectrometry analysis qualitatively confirmed the paxilline EIA results but showed that paxilline analogues 1'-O-acetylpaxilline and 13-desoxypaxilline were the predominant compounds in seeds and grass. In the absence of easily accessible reference standards for specific analysis of some major endophyte toxins, analysis of paxilline and ergot alkaloids by EIA may be suitable substitute parameters. The major advantage of this approach is its ease of use and speed, providing an analytical tool which could enhance routine screening for endophyte toxins in pasture.

Grass invasion into switchgrass managed for biomass energy

USDA-ARS?s Scientific Manuscript database

Switchgrass (Panicum virgatum) is a warm-season perennial grass and is the model herbaceous perennial bioenergy feedstock. Although it is indigenous to North American grasslands east of the Rocky Mountains and has been planted for forage and conservation purposes for more than 75 years, there is con...

Predicting As, Cd, Cu, Pb and Zn levels in grasses (Agrostis sp. and Poa sp.) and stinging nettle (Urtica dioica) applying soil-plant transfer models.

PubMed

Boshoff, Magdalena; De Jonge, Maarten; Scheifler, Renaud; Bervoets, Lieven

2014-09-15

The aim of this study was to derive regression-based soil-plant models to predict and compare metal(loid) (i.e. As, Cd, Cu, Pb and Zn) concentrations in plants (grass Agrostis sp./Poa sp. and nettle Urtica dioica L.) among sites with a wide range of metal pollution and a wide variation in soil properties. Regression models were based on the pseudo total (aqua-regia) and exchangeable (0.01 M CaCl2) soil metal concentrations. Plant metal concentrations were best explained by the pseudo total soil metal concentrations in combination with soil properties. The most important soil property that influenced U. dioica metal concentrations was the clay content, while for grass organic matter (OM) and pH affected the As (OM) and Cu and Zn (pH). In this study multiple linear regression models proved functional in predicting metal accumulation in plants on a regional scale. With the proposed models based on the pseudo total metal concentration, the percentage of variation explained for the metals As, Cd, Cu, Pb and Zn were 0.56%, 0.47%, 0.59%, 0.61%, 0.30% in nettle and 0.46%, 0.38%, 0.27%, 0.50%, 0.28% in grass. Copyright © 2014 Elsevier B.V. All rights reserved.

Stable Carbon Isotope Ratios of Individual Pollen Grains as a Proxy for C3- Versus C4-Grass Abundance in Paleorecords: A Validation Study

NASA Astrophysics Data System (ADS)

Nelson, D. M.; Hu, F.; Pearson, A.

2007-12-01

C3 and C4 grasses have distinct influences on major biogeochemical processes and unique responses to important environmental controls. Difficulties in distinguishing between these two functional groups of grasses have hindered paleoecological studies of grass-dominated ecosystems. We recently developed a technique to analyze the stable carbon isotope composition of individual grass-pollen grains using a spooling- wire microcombustion device interfaced with an isotope-ratio mass spectrometer (Nelson et al. 2007). This technique holds promise for improving C3 and C4 grass reconstructions. It requires ~90% fewer grains than typical methods and avoids assumptions associated with mixing models. However, our previous work was based on known C3 and C4 grasses from herbarium specimens and field collections and the technique had not been test using geological samples. To test the ability of this technique to reproduce the abundance of C3 and C4 grasses on the landscape, we measured δ13C values of >1500 individual grains of grass pollen isolated from the surface sediments of 10 North American lakes that span a large gradient of C3 and C4 grass abundance. Results indicate a strong positive correlation (r=0.94) between % C4-grass pollen (derived from classifying δ13C values from single grains as C3 and C4) and the literature-reported abundance of C4 grasses on the landscape. However, the measured % C4-grass pollen shows some deviation from the actual abundance at sites with high proportions of C4 grasses. This is likely caused by uncertainty in the magnitude, composition, and variability of the analytical blank associated with these measurements. Correcting for this deviation using regression analysis improves the estimation of the abundance of C4 grasses on the landscape. Comparison of the % C4-grass pollen with C/N and δ13C measurements of total organic matter in the same lake-sediment samples illustrates the distinct advantage of grass-pollen δ13C as a proxy for distinguishing C3 and C4 shifts. At 9 of the 10 sites C/N values indicate that surface-sediment organic matter was derived primarily from aquatic production. At the one site where organic matter was produced primarily by vascular plants the δ13C value (-29.3°) suggests organic matter derived exclusively from C3 plants. However, ~80% of the grasses on the landscape at this site are C4 grasses. The C3- like bulk-sediment δ13C value likely represents woody species, which comprise >90% of the pollen spectra. Thus δ13C analysis of single grains of grass pollen offers a new tool to classify grass pollen into two major functional groups and promises to advance our understanding of grassland ecology and evolution. Reference Nelson, D.M., Hu, F.S., Mikucki, J., Tian, J., and Pearson, A., 2007, Carbon isotopic analysis of individual pollen grains from C3 and C4 grasses using a spooling wire microcombustion interface: Geochimica et Cosmochimica Acta, v. 71, p. 4005-4014.

Grass pollen counts, air pollution levels and allergic rhinitis severity.

PubMed

Annesi-Maesano, Isabella; Rouve, Sarah; Desqueyroux, Hélène; Jankovski, Roger; Klossek, Jean-Michel; Thibaudon, Michel; Demoly, Pascal; Didier, Alain

2012-01-01

Little is known about the relation between allergic rhinitis severity and airborne pollen in combination with air pollutants. To model the risk of suffering from severe seasonal allergic rhinitis (SAR) as a function of both pollen count and air pollution levels in a large nationwide sample of patients whose SAR was diagnosed by a physician and confirmed by skin prick test positivity or specific immunolglobulin E to common aeroallergens. The severity of SAR symptoms was estimated with the Symptomatic Global Score (SGS) among 36,397 patients suffering from an untreated and uncomplicated SAR between May and August 2004 in metropolitan France. Patients who had an SGS in the upper third quartile were classified as suffering from severe SAR. A multilevel model relating SAR severity, pollen and air pollution was used to take into account the hierarchical data structure. 18.9% of the 17,567 urban patients retained for the analysis suffered from severe rhinitis. At the Lag0 (day of the visit), a rise of 60 grass pollen grains/m(3) increased the risk of suffering from a severe SAR form by 8% in the multileveled model after adjusting for potential confounders and air pollution levels. Results were also confirmed in the subsample of individuals with documented sensitization to grass pollen. Grass pollen count aggravated SAR in terms of symptoms in our nationwide sample. These findings confirm the need for proper treatment and preventive measures in SAR patients sensitized to grass pollen. Copyright © 2012 S. Karger AG, Basel.

Distribution modelling of pre-Columbian California grasslands with soil phytoliths: New insights for prehistoric grassland ecology and restoration

PubMed Central

2018-01-01

Historical reconstructions of plant community distributions are useful for biogeographic studies and restoration planning, but the quality of insights gained depends on the depth and reliability of historical information available. For the Central Valley of California, one of the most altered terrestrial ecosystems on the planet, this task is particularly difficult given poor historical documentation and sparse relict assemblages of pre-invasion plant species. Coastal and interior prairies were long assumed to have been dominated by perennial bunchgrasses, but this hypothesis has recently been challenged. We evaluated this hypothesis by creating species distribution models (SDMs) using a novel approach based on the abundance of soil phytoliths (microscopic particles of biogenic silica used as a proxy for long-term grass presence) extracted from soil samples at locations statewide. Modeled historical grass abundance was consistently high along the coast and to a lesser extent in higher elevation foothills surrounding the Central Valley. SDMs found strong associations with mean temperature, temperature variability, and precipitation variability, with higher predicted abundance in regions with cooler, equable temperatures and moderated rainfall, mirroring the pattern for modern perennial grass distribution across the state. The results of this study strongly suggest that the pre-Columbian Central Valley of California was not dominated by grasses. Using soil phytolith data as input for SDMs is a promising new method for predicting the extent of prehistoric grass distributions where alternative historical datasets are lacking. PMID:29617400

Distribution modelling of pre-Columbian California grasslands with soil phytoliths: New insights for prehistoric grassland ecology and restoration.

PubMed

Fick, Stephen E; Evett, Rand R

2018-01-01

Historical reconstructions of plant community distributions are useful for biogeographic studies and restoration planning, but the quality of insights gained depends on the depth and reliability of historical information available. For the Central Valley of California, one of the most altered terrestrial ecosystems on the planet, this task is particularly difficult given poor historical documentation and sparse relict assemblages of pre-invasion plant species. Coastal and interior prairies were long assumed to have been dominated by perennial bunchgrasses, but this hypothesis has recently been challenged. We evaluated this hypothesis by creating species distribution models (SDMs) using a novel approach based on the abundance of soil phytoliths (microscopic particles of biogenic silica used as a proxy for long-term grass presence) extracted from soil samples at locations statewide. Modeled historical grass abundance was consistently high along the coast and to a lesser extent in higher elevation foothills surrounding the Central Valley. SDMs found strong associations with mean temperature, temperature variability, and precipitation variability, with higher predicted abundance in regions with cooler, equable temperatures and moderated rainfall, mirroring the pattern for modern perennial grass distribution across the state. The results of this study strongly suggest that the pre-Columbian Central Valley of California was not dominated by grasses. Using soil phytolith data as input for SDMs is a promising new method for predicting the extent of prehistoric grass distributions where alternative historical datasets are lacking.

Relationship between Heavy Metal Concentrations in Soils and Grasses of Roadside Farmland in Nepal

PubMed Central

Yan, Xuedong; Zhang, Fan; Zeng, Chen; Zhang, Man; Devkota, Lochan Prasad; Yao, Tandong

2012-01-01

Transportation activities can contribute to accumulation of heavy metals in roadside soil and grass, which could potentially compromise public health and the environment if the roadways cross farmland areas. Particularly, heavy metals may enter the food chain as a result of their uptake by roadside edible grasses. This research was conducted to investigate heavy metal (Cu, Zn, Cd, and Pb) concentrations in roadside farmland soils and corresponding grasses around Kathmandu, Nepal. Four factors were considered for the experimental design, including sample type, sampling location, roadside distance, and tree protection. A total of 60 grass samples and 60 topsoil samples were collected under dry weather conditions. The Multivariate Analysis of Variance (MANOVA) results indicate that the concentrations of Cu, Zn, and Pb in the soil samples are significantly higher than those in the grass samples; the concentrations of Cu and Pb in the suburban roadside farmland are higher than those in the rural mountainous roadside farmland; and the concentrations of Cu and Zn at the sampling locations with roadside trees are significantly lower than those without tree protection. The analysis of transfer factor, which is calculated as the ratio of heavy-metal concentrations in grass to those in the corresponding soil, indicates that the uptake capabilities of heavy metals from soil to grass is in the order of Zn > Cu > Pb. Additionally, it is found that as the soils’ heavy-metal concentrations increase, the capability of heavy-metal transfer to the grass decreases, and this relationship can be characterized by an exponential regression model. PMID:23202679

A grass–fire cycle eliminates an obligate-seeding tree in a tropical savanna

PubMed Central

Bowman, David M J S; MacDermott, Harry J; Nichols, Scott C; Murphy, Brett P

2014-01-01

A grass–fire cycle in Australian tropical savannas has been postulated as driving the regional decline of the obligate-seeding conifer Callitris intratropica and other fire-sensitive components of the regional flora and fauna, due to proliferation of flammable native grasses. We tested the hypothesis that a high-biomass invasive savanna grass drives a positive feedback process where intense fires destroy fire-sensitive trees, and the reduction in canopy cover facilitates further invasion by grass. We undertook an observational and experimental study using, as a model system, a plantation of C. intratropica that has been invaded by an African grass, gamba (Andropogon gayanus) in the Northern Territory, Australia. We found that high grass biomass was associated with reduced canopy cover and restriction of foliage to the upper canopy of surviving stems, and mortality of adult trees was very high (>50%) even in areas with low fuel loads (1 t·ha−1). Experimental fires, with fuel loads >10 t·ha−1, typical of the grass-invasion front, caused significant mortality due to complete crown scorch. Lower fuel loads cause reduced canopy cover through defoliation of the lower canopy. These results help explain how increases in grass biomass are coupled with the decline of C. intratropica throughout northern Australia by causing a switch from litter and sparse perennial grass fuels, and hence low-intensity surface fires, to heavy annual grass fuel loads that sustain fires that burn into the midstorey. This study demonstrates that changes in fuel type can alter fire regimes with substantial knock-on effects on the biota. PMID:25505543

Hydraulic lift as a determinant of tree-grass coexistence on savannas.

PubMed

Yu, Kailiang; D'Odorico, Paolo

2015-09-01

The coexistence of woody plants and grasses in savannas is determined by a complex set of interacting factors that determine access to resources and demographic dynamics, under the control of external drivers and vegetation feedbacks with the physical environment. Existing theories explain coexistence mainly as an effect of competitive relations and/or disturbances. However, theoretical studies on the way facilitative interactions resulting from hydraulic lift affect tree-grass coexistence and the range of environmental conditions in which savannas are stable are still lacking. We investigated the role of hydraulic lift in the stability of tree-grass coexistence in savannas. To that end, we developed a new mechanistic model that accounts for both competition for soil water in the shallow soil and fire-induced disturbance. We found that hydraulic lift favors grasses, which scavenge the water lifted by woody plants. Thus, hydraulic lift expands (at the expenses of woodlands) the range of environmental conditions in which savannas are stable. These results indicate that hydraulic lift can be an important mechanism responsible for the coexistence of woody plants and grasses in savannas. Grass facilitation by trees through the process of hydraulic lift could allow savannas to persist stably in mesic regions that would otherwise exhibit a forest cover. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

High-biomass C4 grasses-Filling the yield gap.

PubMed

Mullet, John E

2017-08-01

A significant increase in agricultural productivity will be required by 2050 to meet the needs of an expanding and rapidly developing world population, without allocating more land and water resources to agriculture, and despite slowing rates of grain yield improvement. This review examines the proposition that high-biomass C 4 grasses could help fill the yield gap. High-biomass C 4 grasses exhibit high yield due to C 4 photosynthesis, long growth duration, and efficient capture and utilization of light, water, and nutrients. These C 4 grasses exhibit high levels of drought tolerance during their long vegetative growth phase ideal for crops grown in water-limited regions of agricultural production. The stems of some high-biomass C 4 grasses can accumulate high levels of non-structural carbohydrates that could be engineered to enhance biomass yield and utility as feedstocks for animals and biofuels production. The regulatory pathway that delays flowering of high-biomass C 4 grasses in long days has been elucidated enabling production and deployment of hybrids. Crop and landscape-scale modeling predict that utilization of high-biomass C 4 grass crops on land and in regions where water resources limit grain crop yield could increase agricultural productivity. Copyright © 2017 Elsevier B.V. All rights reserved.

Environmental assessment of a representative grass-finishing beef operation in southern Pennsylvania

USDA-ARS?s Scientific Manuscript database

The objective of this study was to quantify environmental impacts of a representative grass-finished beef operation in southeastern Pennsylvania. A farm-gate life cycle assessment was conducted using the Integrated Farm System Model to estimate greenhouse gas emissions, reactive nitrogen loss, and w...

On the causes of variability in amounts of airborne grass pollen in Melbourne, Australia

NASA Astrophysics Data System (ADS)

de Morton, Julian; Bye, John; Pezza, Alexandre; Newbigin, Edward

2011-07-01

In Melbourne, Australia, airborne grass pollen is the predominant cause of hay fever (seasonal rhinitis) during late spring and early summer, with levels of airborne grass pollen also influencing hospital admissions for asthma. In order to improve predictions of conditions that are potentially hazardous to susceptible individuals, we have sought to better understand the causes of diurnal, intra-seasonal and inter-seasonal variability of atmospheric grass pollen concentrations (APC) by analysing grass pollen count data for Melbourne for 16 grass pollen seasons from 1991 to 2008 (except 1994 and 1995). Some of notable features identified in this analysis were that on days when either extreme (>100 pollen grains m-3) or high (50-100 pollen grains m-3) levels of grass pollen were recorded the winds were of continental origin. In contrast, on days with a low (<20 pollen grains m-3) concentration of grass pollen, winds were of maritime origin. On extreme and high grass pollen days, a peak in APC occurred on average around 1730 hours, probably due to a reduction in surface boundary layer turbulence. The sum of daily APC for each grass pollen season was highly correlated ( r = 0.79) with spring rainfall in Melbourne for that year, with about 60% of a declining linear trend across the study period being attributable to a reduction of meat cattle and sheep (and hence grazing land) in rural areas around Melbourne. Finally, all of the ten extreme pollen events (3 days or more with APC > 100 pollen grains m-3) during the study period were characterised by an average downward vertical wind anomaly in the surface boundary layer over Melbourne. Together these findings form a basis for a fine resolution atmospheric general circulation model for grass pollen in Melbourne's air that can be used to predict daily (and hourly) APC. This information will be useful to those sectors of Melbourne's population that suffer from allergic problems.

On the causes of variability in amounts of airborne grass pollen in Melbourne, Australia.

PubMed

de Morton, Julian; Bye, John; Pezza, Alexandre; Newbigin, Edward

2011-07-01

In Melbourne, Australia, airborne grass pollen is the predominant cause of hay fever (seasonal rhinitis) during late spring and early summer, with levels of airborne grass pollen also influencing hospital admissions for asthma. In order to improve predictions of conditions that are potentially hazardous to susceptible individuals, we have sought to better understand the causes of diurnal, intra-seasonal and inter-seasonal variability of atmospheric grass pollen concentrations (APC) by analysing grass pollen count data for Melbourne for 16 grass pollen seasons from 1991 to 2008 (except 1994 and 1995). Some of notable features identified in this analysis were that on days when either extreme (>100 pollen grains m(-3)) or high (50-100 pollen grains m(-3)) levels of grass pollen were recorded the winds were of continental origin. In contrast, on days with a low (<20 pollen grains m(-3)) concentration of grass pollen, winds were of maritime origin. On extreme and high grass pollen days, a peak in APC occurred on average around 1730 hours, probably due to a reduction in surface boundary layer turbulence. The sum of daily APC for each grass pollen season was highly correlated (r = 0.79) with spring rainfall in Melbourne for that year, with about 60% of a declining linear trend across the study period being attributable to a reduction of meat cattle and sheep (and hence grazing land) in rural areas around Melbourne. Finally, all of the ten extreme pollen events (3 days or more with APC > 100 pollen grains m(-3)) during the study period were characterised by an average downward vertical wind anomaly in the surface boundary layer over Melbourne. Together these findings form a basis for a fine resolution atmospheric general circulation model for grass pollen in Melbourne's air that can be used to predict daily (and hourly) APC. This information will be useful to those sectors of Melbourne's population that suffer from allergic problems.

Germination sensitivities to water potential among co-existing C3 and C4 grasses of cool semi-arid prairie grasslands.

PubMed

Mollard, F P O; Naeth, M A

2015-03-01

An untested theory states that C4 grass seeds could germinate under lower water potentials (Ψ) than C3 grass seeds. We used hydrotime modelling to study seed water relations of C4 and C3 Canadian prairie grasses to address Ψ divergent sensitivities and germination strategies along a risk-spreading continuum of responses to limited water. C4 grasses were Bouteloua gracilis, Calamovilfa longifolia and Schizachyrium scoparium; C3 grasses were Bromus carinatus, Elymus trachycaulus, Festuca hallii and Koeleria macrantha. Hydrotime parameters were obtained after incubation of non-dormant seeds under different Ψ PEG 6000 solutions. A t-test between C3 and C4 grasses did not find statistical differences in population mean base Ψ (Ψb (50)). We found idiosyncratic responses of C4 grasses along the risk-spreading continuum. B. gracilis showed a risk-taker strategy of a species able to quickly germinate in a dry soil due to its low Ψb (50) and hydrotime (θH ). The high Ψb (50) of S. scoparium indicates it follows the risk-averse strategy so it can only germinate in wet soils. C. longifolia showed an intermediate strategy: the lowest Ψb (50) yet the highest θH . K. macrantha, a C3 grass which thrives in dry habitats, had the highest Ψb (50), suggesting a risk-averse strategy for a C3 species. Other C3 species showed intermediate germination patterns in response to Ψ relative to C4 species. Our results indicate that grasses display germination sensitivities to Ψ across the risk-spreading continuum of responses. Thus seed water relations may be poor predictors to explain differential recruitment and distribution of C3 and C4 grasses in the Canadian prairies. © 2014 German Botanical Society and The Royal Botanical Society of the Netherlands.

Mathematical modelling of digesta passage rate, mean retention time and in vivo apparent digestibility of two different lengths of hay and big-bale grass silage in ponies.

PubMed

Moore-Colyer, M J S; Morrow, H J; Longland, A C

2003-07-01

Welsh-cross pony geldings (about 300 kg live weight) were used in a 4x4 Latin square experiment to determine the rate of passage and apparent digestibility of unchopped big-bale grass silage (BBL), chopped big-bale grass silage (BBS), unchopped grass hay (HL) and chopped grass hay (HS) offered at approximately 15 g/kg live weight per d. On day 1 of collection weeks, ponies were fed 85 g ytterbium chloride hexahydrate-marked feed 1.5 h after the morning meal. Total faecal collections commenced 8 h later and continued for 168 h. Apparent digestibilities of feed DM, organic matter (OM), crude protein (CP, Nx6.25), acid-detergent fibre (ADF) and neutral-detergent fibre (NDF) were also determined. Faecal excretion data were subjected to the models of Pond et al. (1988) and digesta mean retention time (MRT) calculated from these models and using the algebraic method of Thielmans et al. (1978). Silage had significantly (P<0.05) higher digestibilities of DM, OM, CP, ADF and NDF than hay; however, chop length had no effect. All the models of Pond et al. (1988) accurately described (R(2)>0.8) the pattern of faecal marker excretion. MRT of BBL (29.0 h)>BBS(27 h)>HS and HL (26 h). Compartmental analysis using the G3 model of Pond et al. (1988) showed BBL and HS diets had longer MRT in the time-dependent compartment, whereas BBS and HL had longer MRT in the time-independent compartment. Results from this experiment indicate that BBL and BBS are readily accepted and digested by ponies. While Yb is a successful external marker for determining total tract MRT and for modelling faecal excretion curves in horses, the results did not allow any definite conclusions to be drawn on digesta MRT within the different compartments of the equid gut.

Combining Livestock Production Information in a Process-Based Vegetation Model to Reconstruct the History of Grassland Management

NASA Technical Reports Server (NTRS)

Chang, Jinfeng; Ciais, Philippe; Herrero, Mario; Havlik, Petr; Campioli, Matteo; Zhang, Xianzhou; Bai, Yongfei; Viovy, Nicolas; Joiner, Joanna; Wang, Xuhui;

GRASS GIS: a peer-reviewed scientific platform and future research repository

NASA Astrophysics Data System (ADS)

Chemin, Yann; Petras, Vaclav; Petrasova, Anna; Landa, Martin; Gebbert, Sören; Zambelli, Pietro; Neteler, Markus; Löwe, Peter; Di Leo, Margherita

2015-04-01

Geographical Information System (GIS) is known for its capacity to spatially enhance the management of natural resources. While being often used as an analytical tool, it also represents a collaborative scientific platform to develop new algorithms. Thus, it is critical that GIS software as well as the algorithms are open and accessible to anybody [18]. We present how GRASS GIS, a free and open source GIS, is used by many scientists to implement and perform geoprocessing tasks. We will show how integrating scientific algorithms into GRASS GIS helps to preserve reproducibility of scientific results over time [15]. Moreover, subsequent improvements are tracked in the source code version control system and are immediately available to the public. GRASS GIS therefore acts as a repository of scientific peer-reviewed code, algorithm library, and knowledge hub for future generation of scientists. In the field of hydrology, with the various types of actual evapotranspiration (ET) models being developed in the last 20 years, it becomes necessary to inter-compare methods. Most of already published ETa models comparisons address few number of models, and small to medium areas [3, 6, 7, 22, 23]. With the large amount of remote sensing data covering the Earth, and the daily information available for the past ten years (i.e. Aqua/Terra-MODIS) for each pixel location, it becomes paramount to have a more complete comparison, in space and time. To address this new experimental requirement, a distributed computing framework was designed, and created [3, 4]. The design architecture was built from original satellite datasets to various levels of processing until reaching the requirement of various ETa models input dataset. Each input product is computed once and reused in all ETa models requiring such input. This permits standardization of inputs as much as possible to zero-in variations of models to the models internals/specificities. All of the ET models are available in the new GRASS GIS version 7 as imagery modules and replicability is complete for future research. A set of modules for multiscale analysis of landscape structure was added in 1992 by [1], who developed the r.le model similar to FRAGSTATS ([10]). The modules were gradually improved to become r.li in 2006. Further development continued, with a significant speed up [9] and new interactive user interface. The development of spatial interpolation module v.surf.rst started in 1988 [11] and continued by introduction of new interpolation methods and finally full integration into GRASS GIS version 4 [13]. Since then it was improved several times [8]. The module is an important part of GRASS GIS and is taught at geospatial modeling courses, for example at North Carolina State University [14]. GRASS GIS entails several modules that constitute the result of active research on natural hazard. The r.sim.water simulation model [12] for overland flow under rainfall excess conditions was integrated into the Emergency Routing Decision Planning system as a WPS [17]. It was also utilized by [16] and is now part of Tangible Landscape, a tangible GIS system, which also incorporated the r.damflood, a dam break inundation simulation [2]. The wildfire simulation toolset, originally developed by [24], implementing Rothermel's model [21], available through the GRASS GIS modules r.ros and r.spread, is object of active research. It has been extensively tested and recently adapted to European fuel types ([5, 19, 20]). References [1] Baker, W.L., Cai, Y., 1992. The r.le programs for multiscale analysis of landscape structure using the GRASS geographical information system. Landscape Ecology, 7(4):291-302. [2] Cannata M. and Marzocchi R., 2012. Two-dimensional dam break flooding simulation: a GIS embedded approach. - Natural Hazards 61(3):1143-1159. [3] Chemin, Y.H., 2012. A Distributed Benchmarking Framework for Actual ET Models. In Evapotranspiration - Remote Sensing and Modeling, Intech (Eds). [4] Chemin, Y. H. , 2014. Remote Sensing Raster Programming, 3rd Ed., Lulu (Eds). [5] Di Leo, M., de Rigo, D., Rodriguez-Aseretto, D., Bosco, C., Petroliagkis, T., Camia, A., San-Miguel-Ayanz, J., 2013. Dynamic data driven ensemble for wildfire behaviour assessment: A case study. IFIP Advances in Information and Communication Technology, vol. 413, pp. 11-22, 2013, ISSN:1868-4238. Special issue: "Environmental Software Systems. Fostering sharing information". [6] García, M., Villagarcía, L., Contreras, S., Domingo, F. & Puigdefábregas, J. (2007). Comparison of three operative models for estimating the surface water deficit using aster reflective and thermal data, Sensors 7(6): 860-883. [7] Gao, Y. & Long, D. ,2008. Intercomparison of remote sensing-based models for estimation of evapotranspiration and accuracy assessment based on swat, Hydrological Processes 22: 4850-4869. [8] GRASS GIS Trac, changelog for v.surf.rst, 2015. http://trac.osgeo.org/grass/ [9] GRASS GIS Trac, changelog for r.li, 2015. http://trac.osgeo.org/grass/ [10] McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern analysis program for quantifying landscape structure. USDA For. Serv. Gen. Tech. Rep. PNW-351 [11] Mitas, L., and Mitasova H., 1988, General variational approach to the approximation problem, Computers and Mathematics with Applications, v.16, p. 983-992. [12] Mitas, L., and Mitasova, H., 1998, Distributed soil erosion simulation for effective erosion prevention. Water Resources Research, 34(3), 505-516. [13] Mitasova, H. and Mitas, L., 1993: Interpolation by Regularized Spline with Tension: I. Theory and Implementation, Mathematical Geology, 25, 641-655. [14] North Carolina State University, Geospatial Modeling Course, GIS/MEA582, 2015. http://courses.ncsu.edu/ [15] Petras, V., Gebbert, S., 2014. Testing framework for GRASS GIS: ensuring reproducibility of scientific geospatial computing. Poster presented at: AGU Fall Meeting, December 15-19, 2014, San Francisco, USA. [16] Petrasova, A., Harmon, B., Petras, V., Mitasova, H., 2014. GIS-based environmental modeling with tangible interaction and dynamic visualization. In: Ames, D.P., Quinn, N.W.T., Rizzoli, A.E. (Eds.), Proceedings of the 7th International Congress on Environmental Modelling and Software, June 15-19, San Diego, California, USA. ISBN: 978-88-9035-744-2 [17] Raghavan, v., Choosumrong, S., Yoshida, D., Vinayaraj, P., 2014. Deploying Dynamic Routing Service for Emergency Scenarios using pgRouting, GRASS and ZOO. In Proc. of FOSS4G Europe, Jacobs University, Bremen, Germany, July 15-17, 2014. [18] Rocchini, D., Neteler, M. ,2012. Let the four freedoms paradigm apply to ecology. Trends in Ecology & Evolution, 27: 310-311. [19] Rodriguez-Aseretto, D., de Rigo, D., Di Leo, M., Cortés, A., and San-Miguel-Ayanz, J., 2013. A data-driven model for large wildfire behaviour prediction in europe. Procedia Computer Science, vol. 18, pp. 1861-1870. [20] de Rigo, D., Rodriguez-Aseretto, D., Bosco, C., Di Leo, M., and San-Miguel-Ayanz, J., 2013. An architecture for adaptive robust modelling of wildfire behaviour under deep uncertainty. in Environmental Software Systems. Fostering Information Sharing, ser. IFIP Advances in Information and Communication Technology, J. Ȟrebíˇ cek, G. Schimak, M. Kubásek, and A. Rizzoli, Eds. Springer Berlin Heidelberg, 2013, vol. 413, pp. 367-380. [21] Rothermel, R. C., 1983. How to predict the spread and intensity of forest and range fires. US Forest Service, Gen. Tech. Rep. INT-143. Ogden, Utah. [22] Suleiman, A., Al-Bakri, J., Duqqah, M. & Crago, R. ,2008. Intercomparison ofevapotranspiration estimates at the different ecological zones in jordan, Journal of Hydrometeorology 9(5): 903-919. [23] Timmermans, W. J., Kustas, W. P., Anderson, M. C. & French, A. N. ,2007. An intercomparison of the surface energy balance algorithm for land (sebal) and the two-source energy balance (tseb) modeling schemes, Remote Sensing of Environment 108(4): 369 - 384. [24] Xu, Jianping, 1994. Simulating the spread of wildfires using a geographic information system and remote sensing. Ph. D. Dissertation, Rutgers University, New Brunswick, New Jersey.

GRASS GIS: The first Open Source Temporal GIS

NASA Astrophysics Data System (ADS)

Gebbert, Sören; Leppelt, Thomas

2015-04-01

GRASS GIS is a full featured, general purpose Open Source geographic information system (GIS) with raster, 3D raster and vector processing support[1]. Recently, time was introduced as a new dimension that transformed GRASS GIS into the first Open Source temporal GIS with comprehensive spatio-temporal analysis, processing and visualization capabilities[2]. New spatio-temporal data types were introduced in GRASS GIS version 7, to manage raster, 3D raster and vector time series. These new data types are called space time datasets. They are designed to efficiently handle hundreds of thousands of time stamped raster, 3D raster and vector map layers of any size. Time stamps can be defined as time intervals or time instances in Gregorian calendar time or relative time. Space time datasets are simplifying the processing and analysis of large time series in GRASS GIS, since these new data types are used as input and output parameter in temporal modules. The handling of space time datasets is therefore equal to the handling of raster, 3D raster and vector map layers in GRASS GIS. A new dedicated Python library, the GRASS GIS Temporal Framework, was designed to implement the spatio-temporal data types and their management. The framework provides the functionality to efficiently handle hundreds of thousands of time stamped map layers and their spatio-temporal topological relations. The framework supports reasoning based on the temporal granularity of space time datasets as well as their temporal topology. It was designed in conjunction with the PyGRASS [3] library to support parallel processing of large datasets, that has a long tradition in GRASS GIS [4,5]. We will present a subset of more than 40 temporal modules that were implemented based on the GRASS GIS Temporal Framework, PyGRASS and the GRASS GIS Python scripting library. These modules provide a comprehensive temporal GIS tool set. The functionality range from space time dataset and time stamped map layer management over temporal aggregation, temporal accumulation, spatio-temporal statistics, spatio-temporal sampling, temporal algebra, temporal topology analysis, time series animation and temporal topology visualization to time series import and export capabilities with support for NetCDF and VTK data formats. We will present several temporal modules that support parallel processing of raster and 3D raster time series. [1] GRASS GIS Open Source Approaches in Spatial Data Handling In Open Source Approaches in Spatial Data Handling, Vol. 2 (2008), pp. 171-199, doi:10.1007/978-3-540-74831-19 by M. Neteler, D. Beaudette, P. Cavallini, L. Lami, J. Cepicky edited by G. Brent Hall, Michael G. Leahy [2] Gebbert, S., Pebesma, E., 2014. A temporal GIS for field based environmental modeling. Environ. Model. Softw. 53, 1-12. [3] Zambelli, P., Gebbert, S., Ciolli, M., 2013. Pygrass: An Object Oriented Python Application Programming Interface (API) for Geographic Resources Analysis Support System (GRASS) Geographic Information System (GIS). ISPRS Intl Journal of Geo-Information 2, 201-219. [4] Löwe, P., Klump, J., Thaler, J. (2012): The FOSS GIS Workbench on the GFZ Load Sharing Facility compute cluster, (Geophysical Research Abstracts Vol. 14, EGU2012-4491, 2012), General Assembly European Geosciences Union (Vienna, Austria 2012). [5] Akhter, S., Aida, K., Chemin, Y., 2010. "GRASS GIS on High Performance Computing with MPI, OpenMP and Ninf-G Programming Framework". ISPRS Conference, Kyoto, 9-12 August 2010

Assessment of soil water, carbon and nitrogen cycling in reseeded grassland on the North Wyke Farm Platform using a process-based model.

PubMed

Li, Yuefen; Liu, Yi; Harris, Paul; Sint, Hadewij; Murray, Phil J; Lee, Michael R F; Wu, Lianhai

2017-12-15

The North Wyke Farm Platform (NWFP) generates large volumes of temporally-indexed data that provides a valuable test-bed for agricultural mathematical models in temperate grasslands. In our study, we used the primary datasets generated from the NWFP (https://nwfp.rothamsted.ac.uk/) to validate the SPACSYS model in terms of the dynamics of water loss and forage dry matter yield estimated through cutting. The SPACSYS model is capable of simulating soil water, carbon (C) and nitrogen (N) balance in the soil-plant-atmosphere system. The validated model was then used to simulate the responses of soil water, C and N to reseeding grass cultivars with either high sugar (Lolium perenne L. cv. AberMagic) or deep rooting (Festulolium cv. Prior) traits. Simulation results demonstrated that the SPACSYS model could predict reliably soil water, C and N cycling in reseeded grassland. Compared to AberMagic, the Prior grass could fix more C in the second year following reseeding, whereas less C was lost through soil respiration in the first transition year. In comparison to the grass cultivar of the permanent pasture that existed before reseeding, both grasses reduced N losses through runoff and contributed to reducing water loss, especially Prior in relation to the latter. The SPACSYS model could predict these differences as supported by the rich dataset from the NWFP, providing a tool for future predictions on less characterized pasture. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Utilization of grasses for potential biofuel production and phytoremediation of heavy metal contaminated soils.

PubMed

Balsamo, Ronald A; Kelly, William J; Satrio, Justinus A; Ruiz-Felix, M Nydia; Fetterman, Marisa; Wynn, Rodd; Hagel, Kristen

2015-01-01

This research focuses on investigating the use of common biofuel grasses to assess their potential as agents of long-term remediation of contaminated soils using lead as a model heavy metal ion. We present evidence demonstrating that switch grass and Timothy grass may be potentially useful for long-term phytoremediation of heavy metal contaminated soils and describe novel techniques to track and remove contaminants from inception to useful product. Enzymatic digestion and thermochemical approaches are being used to convert this lignocellulosic feedstock into useful product (sugars, ethanol, biocrude oil+biochar). Preliminary studies on enzymatic hydrolysis and fast pyrolysis of the Switchgrass materials that were grown in heavy metal contaminated soil and non-contaminated soils show that the presence of lead in the Switchgrass material feedstock does not adversely affect the outcomes of the conversion processes. These results indicate that the modest levels of contaminant uptake allow these grass species to serve as phytoremediation agents as well as feedstocks for biofuel production in areas degraded by industrial pollution.

Defining Common Ground: A Grass Roots Model for University-Public School Collaboration.

ERIC Educational Resources Information Center

Starlings, Cable; Dybdahl, Claudia S.

1994-01-01

A collaborative, grass-roots partnership focusing on students at risk for educational failure has been developed by the University of Alaska Anchorage and the Anchorage (Alaska) School District. The effort is distinguished by a perception of common ground, a minimal administrative and financial structure, and a high degree of commitment from…

Generation and characterization of the Western Regional Research Center brachypodium T-DNA insertional mutant collection

USDA-ARS?s Scientific Manuscript database

The model grass Brachypodium distachyon (Brachypodium) is an excellent system for studying the basic biology underlying traits relevant to the use of grasses as food, forage and energy crops. To add to the growing collection of Brachypodium resources available to plant scientists, we further optim...

A diurnal reflectance model using grass: Surface-substrate interaction and inverse solution - October 16, 2011

EPA Science Inventory

We report an analysis of canopy reflectance (ρ) experiment, using hand-held radiometer to measure distribution of biomass in a grass field. The analysis: 1) separates the green-fraction from thatch and soil background, 2) accounts for the changing diurnal ρ with the sun elevation...

Interactions among resource partitioning, sampling effect, and facilitation on the biodiversity effect: a modeling approach.

PubMed

Flombaum, Pedro; Sala, Osvaldo E; Rastetter, Edward B

2014-02-01

Resource partitioning, facilitation, and sampling effect are the three mechanisms behind the biodiversity effect, which is depicted usually as the effect of plant-species richness on aboveground net primary production. These mechanisms operate simultaneously but their relative importance and interactions are difficult to unravel experimentally. Thus, niche differentiation and facilitation have been lumped together and separated from the sampling effect. Here, we propose three hypotheses about interactions among the three mechanisms and test them using a simulation model. The model simulated water movement through soil and vegetation, and net primary production mimicking the Patagonian steppe. Using the model, we created grass and shrub monocultures and mixtures, controlled root overlap and grass water-use efficiency (WUE) to simulate gradients of biodiversity, resource partitioning and facilitation. The presence of shrubs facilitated grass growth by increasing its WUE and in turn increased the sampling effect, whereas root overlap (resource partitioning) had, on average, no effect on sampling effect. Interestingly, resource partitioning and facilitation interacted so the effect of facilitation on sampling effect decreased as resource partitioning increased. Sampling effect was enhanced by the difference between the two functional groups in their efficiency in using resources. Morphological and physiological differences make one group outperform the other; once these differences were established further differences did not enhance the sampling effect. In addition, grass WUE and root overlap positively influence the biodiversity effect but showed no interactions.

Toward Genomics-Based Breeding in C3 Cool-Season Perennial Grasses.

PubMed

Talukder, Shyamal K; Saha, Malay C

2017-01-01

Most important food and feed crops in the world belong to the C3 grass family. The future of food security is highly reliant on achieving genetic gains of those grasses. Conventional breeding methods have already reached a plateau for improving major crops. Genomics tools and resources have opened an avenue to explore genome-wide variability and make use of the variation for enhancing genetic gains in breeding programs. Major C3 annual cereal breeding programs are well equipped with genomic tools; however, genomic research of C3 cool-season perennial grasses is lagging behind. In this review, we discuss the currently available genomics tools and approaches useful for C3 cool-season perennial grass breeding. Along with a general review, we emphasize the discussion focusing on forage grasses that were considered orphan and have little or no genetic information available. Transcriptome sequencing and genotype-by-sequencing technology for genome-wide marker detection using next-generation sequencing (NGS) are very promising as genomics tools. Most C3 cool-season perennial grass members have no prior genetic information; thus NGS technology will enhance collinear study with other C3 model grasses like Brachypodium and rice. Transcriptomics data can be used for identification of functional genes and molecular markers, i.e., polymorphism markers and simple sequence repeats (SSRs). Genome-wide association study with NGS-based markers will facilitate marker identification for marker-assisted selection. With limited genetic information, genomic selection holds great promise to breeders for attaining maximum genetic gain of the cool-season C3 perennial grasses. Application of all these tools can ensure better genetic gains, reduce length of selection cycles, and facilitate cultivar development to meet the future demand for food and fodder.

DNA Methylation of T1R1 Gene in the Vegetarian Adaptation of Grass Carp Ctenopharyngodon idella.

PubMed

Cai, Wenjing; He, Shan; Liang, Xu-Fang; Yuan, Xiaochen

2018-05-02

Although previous studies have indicated importance of taste receptors in food habits formation in mammals, little is known about those in fish. Grass carp is an excellent model for studying vegetarian adaptation, as it shows food habit transition from carnivore to herbivore. In the present study, pseudogenization or frameshift mutations of the umami receptors that hypothesized related to dietary switch in vertebrates, were not found in grass carp, suggesting other mechanisms for vegetarian adaptation in grass carp. T1R1 and T1R3 strongly responded to L-Arg and L-Lys, differing from those of zebrafish and medaka, contributing to high species specificity in amino acid preferences and diet selection of grass carp. After food habit transition of grass carp, DNA methylation levels were higher in CPG1 and CPG3 islands of upstream control region of T1R1 gene. Luciferase activity assay of upstream regulatory region of T1R1 (-2500-0 bp) without CPG1 or CPG3 indicated that CPG1 and CPG3 might be involved in transcriptional regulation of T1R1 gene. Subsequently, high DNA methylation decreased expression of T1R1 in intestinal tract. It could be a new mechanism to explain, at least partially, the vegetarian adaptation of grass carp by regulation of expression of umami receptor via epigenetic modification.

Effects of the heterogeneous landscape on a predator-prey system

NASA Astrophysics Data System (ADS)

Lee, Sang-Hee

2010-01-01

In order to understand how a heterogeneous landscape affects a predator-prey system, a spatially explicit lattice model consisting of predators, prey, grass, and landscape was constructed. The predators and preys randomly move on the lattice space and the grass grows in its neighboring site according to its growth probability. When predators and preys meet at the same site at the same time, a number of prey, equal to the number of predators are eaten. This rule was also applied to the relationship between the prey and grass. The predator (prey) could give birth to an offspring when it ate prey (grass), with a birth probability. When a predator or prey animal was initially introduced, or newly born, its health state was set at a given high value. This health state decreased by one with every time step. When the state of an animal decreased to less than zero, the animal died and was removed from the system. The heterogeneous landscape was characterized by parameter H, which controlled the heterogeneity according to the neutral model. The simulation results showed that H positively or negatively affected a predator’s survival, while its effect on prey and grass was less pronounced. The results can be understood by the disturbance of the balance between the prey and predator densities in the areas where the animals aggregated.

Assessing the biophysical naturalness of grassland in eastern North Dakota with hyperspectral imagery

NASA Astrophysics Data System (ADS)

Zhou, Qiang

Over the past two decades, non-native species within grassland communities have quickly developed due to human migration and commerce. Invasive species like Smooth Brome grass (Bromus inermis) and Kentucky Blue Grass (Poa pratensis), seriously threaten conservation of native grasslands. This study aims to discriminate between native grasslands and planted hayfields and conservation areas dominated by introduced grasses using hyperspectral imagery. Hyperspectral imageries from the Hyperion sensor on EO-1 were acquired in late spring and late summer on 2009 and 2010. Field spectra for widely distributed species as well as smooth brome grass and Kentucky blue grass were collected from the study sites throughout the growing season. Imagery was processed with an unmixing algorithm to estimate fractional cover of green and dry vegetation and bare soil. As the spectrum is significantly different through growing season, spectral libraries for the most common species are then built for both the early growing season and late growing season. After testing multiple methods, the Adaptive Coherence Estimator (ACE) was used for spectral matching analysis between the imagery and spectral libraries. Due in part to spectral similarity among key species, the results of spectral matching analysis were not definitive. Additional indexes, "Level of Dominance" and "Band variance", were calculated to measure the predominance of spectral signatures in any area. A Texture co-occurrence analysis was also performed on both "Level of Dominance" and "Band variance" indexes to extract spatial characteristics. The results suggest that compared with disturbed area, native prairie tend to have generally lower "Level of Dominance" and "Band variance" as well as lower spatial dissimilarity. A final decision tree model was created to predict presence of native or introduced grassland. The model was more effective for identification of Mixed Native Grassland than for grassland dominated by a single species. The discrimination of native and introduced grassland was limited by the similarity of spectral signatures between forb-dominated native grasslands and brome-grass stands. However, saline native grasslands were distinguishable from brome grass.

Evaluation of reference genes for quantitative RT-PCR in Lolium temulentum under abiotic stress

USDA-ARS?s Scientific Manuscript database

Lolium temulentum is a valuable model grass species for the study of stress in forage and turf grasses. Gene expression analysis by quantitative real time RT-PCR relies on the use of proper internal standards. The aim of this study was to identify and evaluate reference genes for use in real-time q...

Final technical report for: Insertional Mutagenesis of Brachypodium distachyon DE-AI02-07ER64452

DOE Office of Scientific and Technical Information (OSTI.GOV)

John, Vogel P.

Several bioenergy grasses are poised to become a major source of energy in the United States. Despite their increasing importance, we know little about the basic biology underlying the traits that control the utility of grasses as energy crops. Better knowledge of grass biology (e.g. identification of the genes that control cell wall composition, plant architecture, cell size, cell division, reproduction, nutrient uptake, carbon flux, etc.) could be used to design rational strategies for crop improvement and shorten the time required to domesticate these species. The use of an appropriate model system is an efficient way to gain this knowledge.more » Brachypodium distachyon is a small annual grass with all the attributes needed to be a modern model organism including simple growth requirements, fast generation time, small stature, small genome size and self-fertility. These attributes led to the recommendation in the DOE’s “Breaking the Biological Barriers to Cellulosic Ethanol: A Joint Research Agenda” report to propose developing and using B. distachyon as a model for energy crops to accelerate their domestication. Strategic investments (e.g. genome sequencing) in B. distachyon by the DOE are now bearing fruit and B. distachyon is being used as a model grass by hundreds of laboratories worldwide. Sequence indexed insertional mutants are an extremely powerful tool for both forward and reverse genetics. They allow researchers to order mutants in any gene tagged in the collection by simply emailing a request. The goal of this project was to create a collection of sequence indexed insertional mutants (T-DNA lines) for the model grass Brachypodium distachyon in order to facilitate research by the scientific community. During the course of this grant we created a collection of 23,649 B. distachyon T-DNA lines and identified 26,112 unique insertion sites. The collection can be queried through the project website (http://jgi.doe.gov/our-science/science-programs/plant-genomics/brachypodium/brachypodium-t-dna-collection/) and through the Phytozome genome browser (http://phytozome.jgi.doe.gov/pz/portal.html). The collection has been heavily utilized by the research community and, as of October 23, 2015, 223 orders for 12,069 seeds packets have been filled. In addition to creating this resource, we also optimized methods for transformation and sequencing DNA flanking insertion sites.« less

Divergent evapotranspiration partition dynamics between shrubs and grasses in a shrub-encroached steppe ecosystem.

PubMed

Wang, Pei; Li, Xiao-Yan; Wang, Lixin; Wu, Xiuchen; Hu, Xia; Fan, Ying; Tong, Yaqin

2018-06-04

Previous evapotranspiration (ET) partitioning studies have usually neglected competitions and interactions between antagonistic plant functional types. This study investigated whether shrubs and grasses have divergent ET partition dynamics impacted by different water-use patterns, canopy structures, and physiological properties in a shrub-encroached steppe ecosystem in Inner Mongolia, China. The soil water-use patterns of shrubs and grasses have been quantified by an isotopic tracing approach and coupled into an improved multisource energy balance model to partition ET fluxes into soil evaporation, grass transpiration, and shrub transpiration. The mean fractional contributions to total ET were 24 ± 13%, 20 ± 4%, and 56 ± 16% for shrub transpiration, grass transpiration, and soil evaporation respectively during the growing season. Difference in ecohydrological connectivity and leaf development both contributed to divergent transpiration partitioning between shrubs and grasses. Shrub-encroachment processes result in larger changes in the ET components than in total ET flux, which could be well explained by changes in canopy resistance, an ecosystem function dominated by the interaction of soil water-use patterns and ecosystem structure. The analyses presented here highlight the crucial effects of vegetation structural changes on the processes of land-atmosphere interaction and climate feedback. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Convergence of macroscopic tongue anatomy in ruminants and scaling relationships with body mass or tongue length.

PubMed

Meier, Andrea R; Schmuck, Ute; Meloro, Carlo; Clauss, Marcus; Hofmann, Reinhold R

2016-03-01

Various morphological measures demonstrate convergent evolution in ruminants with their natural diet, in particular with respect to the browser/grazer dichotomy. Here, we report quantitative macroanatomical measures of the tongue (length and width of specific parts) of 65 ruminant species and relate them to either body mass (BM) or total tongue length, and to the percentage of grass in the natural diet (%grass). Models without and with accounting for the phylogenetic structures of the dataset were used, and models were ranked using Akaike's Information Criterion. Scaling relationships followed geometric principles, that is, length measures scaled with BM to the power of 0.33. Models that used tongue length rather than BM as a body size proxy were consistently ranked better, indicating that using size proxies that are less susceptible to a wider variety of factors (such as BM that fluctuates with body condition) should be attempted whenever possible. The proportion of the freely mobile tongue tip of the total tongue (and hence also the corpus length) was negatively correlated to %grass, in accordance with concepts that the feeding mechanism of browsers requires more mobile tongues. It should be noted that some nonbrowsers, such as cattle, use a peculiar mechanism for grazing that also requires long, mobile tongues, but they appear to be exceptions. A larger corpus width with increasing %grass corresponds to differences in snout shape with broader snouts in grazers. The Torus linguae is longer with increasing %grass, a finding that still warrants functional interpretation. This study shows that tongue measures covary with diet in ruminants. In contrast, the shape of the tongue (straight or "hourglass-shaped" as measured by the ratio of the widest and smallest corpus width) is unrelated to diet and is influenced strongly by phylogeny. © 2015 Wiley Periodicals, Inc.

Development of innovative technique that may be used as models for the increase of biomass production with grasses and other species

NASA Astrophysics Data System (ADS)

Burton, G. W.; Hanna, W. W.

1981-09-01

Techniques for biomass increase are discussed: irradiation breeding of sterile triploid turf bermuda grasses; irradiation breeding of sterile Coastcross-1, a forage grass hybrid to increase winter hardiness; heterosis resulting from crossing specific irradiation induced mutants with their normal inbred parent; use of mitomycin and streptomycin to create cytoplasmic male sterile mutants in pearl millet; biomass of napiergrass; evaluation of mutagen induced lignin mutants to maximize metabolizable energy in sorghum; interspecific crosses in Pennisetum; production of homozygous translocation tester stocks; use of radiation to induce and transfer reproductive behavior in plants; and genetics of radiation induced mutations.

Overview of the 2013 FireFlux II grass fire field experiment

Treesearch

C.B. Clements; B. Davis; D. Seto; J. Contezac; A. Kochanski; J.-B. Fillipi; N. Lareau; B. Barboni; B. Butler; S. Krueger; R. Ottmar; R. Vihnanek; W.E. Heilman; J. Flynn; M.A. Jenkins; J. Mandel; C. Teske; D. Jimenez; J. O' Brien; B. Lefer

2014-01-01

In order to better understand the dynamics of fire-atmosphere interactions and the role of micrometeorology on fire behaviour the FireFlux campaign was conducted in 2006 on a coastal tall-grass prairie in southeast Texas, USA. The FireFlux campaign dataset has become the international standard for evaluating coupled fire-atmosphere model systems. While FireFlux is one...

Using multi-approaches to investigate the effects of land cover on runoff and soil erosion in the Loess Plateau of China

NASA Astrophysics Data System (ADS)

Gao, G.; Fu, B.; Liu, Y.; Wang, Y.

2012-12-01

This study used the in-situ measurement, model simulation and radioisotope tracing methods to investigate the effects of land cover on runoff and soil erosion at plot and hillslope scales in the Loess Plateau of China. Three runoff plot groups covered by sparse young trees (Group 1), native shrubs (Group 2) and dense tussock (Group 3) with different revegetation time were established in the Yangjuangou catchment of Loess Plateau. Greater runoff was produced in plot groups (Group 2 and Group 3) with higher vegetation cover and longer restoration time as a result of soil compaction processes. Both of the runoff coefficient and soil loss rate decreased with increasing plot length in Group 2 and Group 3 plots. The runoff coefficient increased with plot length in Group 1 plots located at the early stage of revegetation, and the soil loss rates increased over an area threshold. Therefore, the effect of scale on runoff and soil erosion was dependent on restoration extent. The antecedent moisture condition (AMC) was explicitly incorporated in runoff production and initial abstraction of the SCS-CN model, and the direct effect of runoff on event soil loss was considered in the RUSLE model by adopting a rainfall-runoff erosivity factor. The modified SCS-CN and RUSLE models were coupled to link rainfall-runoff-erosion modeling. The modified SCS-CN model was accurate in predicting event runoff from the three plot groups with Nash-Sutcliffe model efficiency (EF) over 0.85, and the prediction accuracy of the modified RUSLE model was satisfactory with EF values being over 0.70. The 137Cs tracing technique was used to examine soil erosion under different land uses and land-use combinations. The results show that the order of erosion rate in different land uses increases sequentially from mature forest to grass to young forest to orchard to terrace crop. The land-use combinations of 'grass (6 years old) + mature forest (25 years old) + grass (25 years old)' and 'grass (6 years old) + young forest (6 years old) + mature forest (25 years old) + grass (25 years old)' are better for soil erosion control, lowering soil erosion amount by 42% compared with a mixtures of 'grass (6 years old) and shrub (6 years old)'. This study indicates that land cover type/pattern, vegetation cover, soil property, restoration time and scale effect as well as stand condition all contribute to the complex hydrological effects of restoring vegetation in the Loess Plateau. Each approach has its own advantages and limitations. Appropriate method should be chosen for specific purpose and study scale. It is better that the results from different approach can be checked with each other.

Detection of platinum species in plant material.

PubMed

Messerschmidt, J; Alt, F; Tölg, G

1995-05-01

Model experiments for the detection of platinum species in extracts from native and platinum-treated grass cultivations are described. The procedural steps are cultivation of the grass samples, extraction and concentration of the platinum species by ultrafiltration and freeze-drying, preparative separation of the species by gel chromatography followed by isotachophoresis, and sequential analytical detection of the separated platinum species by adsorptive voltammetry. After isotachophoresis, sharp peaks of platinum species could be detected. In the native grass extract only one platinum species (160-200 kDa) was found. In the platinum-treated grass extracts several platinum species were observed in the molecular mass range from 1 to > 1000 kDa. By an extremely sensitive platinum determination method (adsorptive voltammetry; detection limit, 2 pg Pt abs.) it was possible to detect platinum even in stained protein bands from horizontal gel electrophoresis of platinum containing fractions obtained after isotachophoresis.

An integral projection model with YY-males and application to evaluating grass carp control

USGS Publications Warehouse

Erickson, Richard A.; Eager, Eric A.; Brey, Marybeth; Hansen, Michael J.; Kocovsky, Patrick

2017-01-01

Invasive fish species disrupt ecosystems and cause economic damage. Several methods have been discussed to control populations of invasive fish including the release of YY-males. YY-males are fish that have 2 male chromosomes compared to a XY-male. When YY-males mate, they only produce male (XY) offspring. This decreases the female proportion of the population and can, in theory, eradicate local populations by biasing the sex-ratio. YY-males have been used as a population control tool for brook trout in montane streams and lakes in Idaho, USA. The YY-male control method has been discussed for grass carp in Lake Erie, North America. We developed and presented an integral projection model for grass carp to model the use of YY-males as a control method for populations in this lake. Using only the YY-male control method, we found that high levels of YY-males would need to be release annually to control the species. Specifically, these levels were the same order of magnitude as the baseline adult population (e.g., 1000 YY-males needed to be released annual for 20 years to control a baseline adult population of 2500 grass carp). These levels may not be reasonable or obtainable for fisheries managers given the impacts of YY-males on aquatic vegetation and other constraints of natural resource management.

Sporophytic control of pollen tube growth and guidance in grasses.

PubMed

Lausser, Andreas; Dresselhaus, Thomas

2010-04-01

Pollen tube growth and guidance in the female tissues of flowering plants is a long-studied and anatomically well-described process. A large number of gene products and chemical compounds involved have been identified in the last 20 years, and some underlying molecular mechanisms including self-incompatibility in the Brassicaceae, Solanaceae and Papaveraceae are now well understood. However, the largest part of the pollen tube pathway inside the transmitting tract towards the ovule harbouring the female gametophyte still requires intensive investigations. Especially in the economically most import plant family, the Poaceae or grasses, progamic pollen tube development is barely understood. Using maize as a model, we propose to divide pollen tube germination, growth and guidance towards the female gametophyte into five distinct phases. The model is adapted from Arabidopsis thaliana, taking anatomical differences and novel genetic and cellular studies into consideration. With the exception of Phase V, all phases seem to be under sporophytic control in grasses.

Ultra Low-Dose Radiation: Stress Responses and Impacts Using Rice as a Grass Model

PubMed Central

Rakwal, Randeep; Agrawal, Ganesh Kumar; Shibato, Junko; Imanaka, Tetsuji; Fukutani, Satoshi; Tamogami, Shigeru; Endo, Satoru; Sahoo, Sarata Kumar; Masuo, Yoshinori; Kimura, Shinzo

2009-01-01

We report molecular changes in leaves of rice plants (Oryza sativa L. - reference crop plant and grass model) exposed to ultra low-dose ionizing radiation, first using contaminated soil from the exclusion zone around Chernobyl reactor site. Results revealed induction of stress-related marker genes (Northern blot) and secondary metabolites (LC-MS/MS) in irradiated leaf segments over appropriate control. Second, employing the same in vitro model system, we replicated results of the first experiment using in-house fabricated sources of ultra low-dose gamma (γ) rays and selected marker genes by RT-PCR. Results suggest the usefulness of the rice model in studying ultra low-dose radiation response/s. PMID:19399245

Subtropical grass pollen allergens are important for allergic respiratory diseases in subtropical regions

PubMed Central

2012-01-01

Background Grass pollen allergens are a major cause of allergic respiratory disease but traditionally prescribing practice for grass pollen allergen-specific immunotherapy has favoured pollen extracts of temperate grasses. Here we aim to compare allergy to subtropical and temperate grass pollens in patients with allergic rhinitis from a subtropical region of Australia. Methods Sensitization to pollen extracts of the subtropical Bahia grass (Paspalum notatum), Johnson grass (Sorghum halepense) and Bermuda grass (Cynodon dactylon) as well as the temperate Ryegrass (Lolium perenne) were measured by skin prick in 233 subjects from Brisbane. Grass pollen-specific IgE reactivity was tested by ELISA and cross-inhibition ELISA. Results Patients with grass pollen allergy from a subtropical region showed higher skin prick diameters with subtropical Bahia grass and Bermuda grass pollens than with Johnson grass and Ryegrass pollens. IgE reactivity was higher with pollen of Bahia grass than Bermuda grass, Johnson grass and Ryegrass. Patients showed asymmetric cross-inhibition of IgE reactivity with subtropical grass pollens that was not blocked by temperate grass pollen allergens indicating the presence of species-specific IgE binding sites of subtropical grass pollen allergens that are not represented in temperate grass pollens. Conclusions Subtropical grass pollens are more important allergen sources than temperate grass pollens for patients from a subtropical region. Targeting allergen-specific immunotherapy to subtropical grass pollen allergens in patients with allergic rhinitis in subtropical regions could improve treatment efficacy thereby reducing the burden of allergic rhinitis and asthma. PMID:22409901

Analysis of Giga-size Earth Observation Data in Open Source GRASS GIS 7 - from Desktop to On-line Solutions.

NASA Astrophysics Data System (ADS)

Stepinski, T. F.; Mitasova, H.; Jasiewicz, J.; Neteler, M.; Gebbert, S.

2014-12-01

GRASS GIS is a leading open source GIS for geospatial analysis and modeling. In addition to being utilized as a desktop GIS it also serves as a processing engine for high performance geospatial computing for applications in diverse disciplines. The newly released GRASS GIS 7 supports big data analysis including temporal framework, image segmentation, watershed analysis, synchronized 2D/3D animations and many others. This presentation will focus on new GRASS GIS 7-powered tools for geoprocessing giga-size earth observation (EO) data using spatial pattern analysis. Pattern-based analysis connects to human visual perception of space as well as makes geoprocessing of giga-size EO data possible in an efficient and robust manner. GeoPAT is a collection of GRASS GIS 7 modules that fully integrates procedures for pattern representation of EO data and patterns similarity calculations with standard GIS tasks of mapping, maps overlay, segmentation, classification(Fig 1a), change detections etc. GeoPAT works very well on a desktop but it also underpins several GeoWeb applications (http://sil.uc.edu/ ) which allow users to do analysis on selected EO datasets without the need to download them. The GRASS GIS 7 temporal framework and high resolution visualizations will be illustrated using time series of giga-size, lidar-based digital elevation models representing the dynamics of North Carolina barrier islands over the past 15 years. The temporal framework supports efficient raster and vector data series analysis and simplifies data input for visual analysis of dynamic landscapes (Fig. 1b) allowing users to rapidly identify vulnerable locations, changes in built environment and eroding coastlines. Numerous improvements in GRASS GIS 7 were implemented to support terabyte size data processing for reconstruction of MODIS land surface temperature (LST) at 250m resolution using multiple regressions and PCA (Fig. 1c) . The new MODIS LST series (http://gis.cri.fmach.it/eurolst/) includes 4 maps per day since year 2000, provide improved data for the epidemiological predictions, viticulture, assessment of urban heat islands and numerous other applications. The presentation will conclude with outline of future development for big data interfaces to further enhance the web-based GRASS GIS data analysis.

The spatial distribution of C3 and C4 grasses in North America through the next century

NASA Astrophysics Data System (ADS)

Cotton, J. M.; Mosier, T. M.; Cerling, T. E.; Ehleringer, J. R.; Hoppe, K. A.; Still, C. J.

2014-12-01

C4 grasses currently cover ~18% of the earth's surface and are economically important as food sources, but their distributions are likely to change with future climate changes. As a result of the opposing impacts of atmospheric CO2 and temperature on C3 and C4 physiology, future changes to the productivity and distributions of these grasses have remained unclear. We have used past and present tooth enamel, collagen, and bone carbon isotope ratios (δ13C) of Bison and Mammoth grazers to record the δ13C values of their diet, and the abundance of C3 and C4 vegetation in these habitats. Thus, the δ13C values of bison and mammoth tissues serve as a proxy for vegetation composition across North America through time. We combine these isotope data with ensemble CMIP5 climate model outputs, eight different climatic and fire predictor variables and advanced statistical techniques to model the spatial distribution of C3 and C4 grasses up through the year 2100 for two different emissions scenarios. Using the Random Forest algorithm, our model explains 91% of the spatial and temporal isotopic variability in bison and mammoth tissues and infers that mean summer temperature is the strongest predictor of all climate variables. For the emission scenario RCP4.5, in which atmospheric CO2 levels are predicted to rise to ~540 ppm by 2100, we find decreases in the abundance of C4 grasses of up to 30% in the south-central Great Plains and the Florida peninsula, and increases of up to 50% in the northern Great Plains. For the RCP8.5 scenario, in which atmospheric CO2 levels are expected to rise to ~930 ppm by 2100, our model predicts minor decreases in the abundance of C4 grasses in Texas and Oklahoma, but increases of 30-50% over the majority of the Great Plains. The overall effect of these changes is a homogenization of the Great Plains ecoregion in terms of grassland type distributions, and the loss of the highest abundance of C4 ecosystems of the panhandles of Texas, Oklahoma and western Kansas. These results have important implications for future changes to insect and mammalian biodiversity and trophic interactions across the Great Plains of North America.

Molecular Physiology of Root System Architecture in Model Grasses

NASA Astrophysics Data System (ADS)

Hixson, K.; Ahkami, A. H.; Anderton, C.; Veličković, D.; Myers, G. L.; Chrisler, W.; Lindenmaier, R.; Fang, Y.; Yabusaki, S.; Rosnow, J. J.; Farris, Y.; Khan, N. E.; Bernstein, H. C.; Jansson, C.

2017-12-01

Unraveling the molecular and physiological mechanisms involved in responses of Root System Architecture (RSA) to abiotic stresses and shifts in microbiome structure is critical to understand and engineer plant-microbe-soil interactions in the rhizosphere. In this study, accessions of Brachypodium distachyon Bd21 (C3 model grass) and Setaria viridis A10.1 (C4 model grass) were grown in phytotron chambers under current and elevated CO2 levels. Detailed growth stage-based phenotypic analysis revealed different above- and below-ground morphological and physiological responses in C3 and C4 grasses to enhanced CO2 levels. Based on our preliminary results and by screening values of total biomass, water use efficiency, root to shoot ratio, RSA parameters and net assimilation rates, we postulated a three-phase physiological mechanism, i.e. RootPlus, BiomassPlus and YieldPlus phases, for grass growth under elevated CO2 conditions. Moreover, this comprehensive set of morphological and process-based observations are currently in use to develop, test, and calibrate biophysical whole-plant models and in particular to simulate leaf-level photosynthesis at various developmental stages of C3 and C4 using the model BioCro. To further link the observed phenotypic traits at the organismal level to tissue and molecular levels, and to spatially resolve the origin and fate of key metabolites involved in primary carbohydrate metabolism in different root sections, we complement root phenotypic observations with spatial metabolomics data using mass spectrometry imaging (MSI) methods. Focusing on plant-microbe interactions in the rhizosphere, six bacterial strains with plant growth promoting features are currently in use in both gel-based and soil systems to screen root growth and development in Brachypodium. Using confocal microscopy, GFP-tagged bacterial systems are utilized to study the initiation of different root types of RSA, including primary root (PR), coleoptile node axile root (CNR) and leaf node axile root (LNR) during developmental stages of root formation. The root exudates also will be quantified and preliminary data will be used to engineer our microbial consortium to improve plant growth.

Effects of vegetation on runoff generation, sediment yield and soil shear strength on road-side slopes under a simulation rainfall test in the Three Gorges Reservoir Area, China.

PubMed

Liu, Yao-Jun; Wang, Tian-Wei; Cai, Chong-Fa; Li, Zhao-Xia; Cheng, Dong-Bing

2014-07-01

Vegetation recolonization has often been used to control roadside slope erosion, and in this paper, four restoration models - Natural Restoration, Grass, Grass & Shrub, Sodded Strip - were chosen to recolonize the plants on a newly built unpaved roadside slope in the Three Gorges Reservoir Area. After eight months growth, eight rainfall simulations (intensity of 90 mm h(-1) for 60 min) and in-situ soil shear strength test were then carried out to identify the impacts of vegetation on roadside slope erosion and soil shear strength. The erosion on cutslopes was higher than that on fillslopes. The runoff coefficient and soil detachment rate were significantly lower on the Grass & Shrub model (4.3% and 1.99 g m(-2) min(-1), respectively) compared with the other three, which had the highest surface cover (91.4%), aboveground biomass (1.44 kg m(-2)) and root weight density (3.94 kg m(-3)). The runoff coefficient and soil detachment rate on roadside slopes showed a logarithmic decrease with the root weight density, root length density and aboveground biomass. The soil shear strength measured before and after the rainfall was higher on Grass & Shrub (59.29 and 53.73 kPa) and decreased on Grass (46.93 and 40.48 kPa), Sodded Strip (31.20 and 18.87 kPa) and Natural Restoration (25.31 and 9.36 kPa). Negative linear correlations were found between the soil shear strength reduction and aboveground biomass, root weight density and root length density. The variation of soil shear strength reduction was closely related to the roadside slope erosion, a positive linear correlation was found between runoff coefficient and soil shear strength reduction, and a power function was shown between soil detachment rate and soil shear strength reduction. This study demonstrated that Grass and Grass & Shrub were more suitable and highly cost-effective in controlling initial period erosion of newly built low-volume unpaved road. Copyright © 2014 Elsevier B.V. All rights reserved.

UAVs and Machine Learning Revolutionising Invasive Grass and Vegetation Surveys in Remote Arid Lands.

PubMed

Sandino, Juan; Gonzalez, Felipe; Mengersen, Kerrie; Gaston, Kevin J

2018-02-16

The monitoring of invasive grasses and vegetation in remote areas is challenging, costly, and on the ground sometimes dangerous. Satellite and manned aircraft surveys can assist but their use may be limited due to the ground sampling resolution or cloud cover. Straightforward and accurate surveillance methods are needed to quantify rates of grass invasion, offer appropriate vegetation tracking reports, and apply optimal control methods. This paper presents a pipeline process to detect and generate a pixel-wise segmentation of invasive grasses, using buffel grass (Cenchrus ciliaris) and spinifex (Triodia sp.) as examples. The process integrates unmanned aerial vehicles (UAVs) also commonly known as drones, high-resolution red, green, blue colour model (RGB) cameras, and a data processing approach based on machine learning algorithms. The methods are illustrated with data acquired in Cape Range National Park, Western Australia (WA), Australia, orthorectified in Agisoft Photoscan Pro, and processed in Python programming language, scikit-learn, and eXtreme Gradient Boosting (XGBoost) libraries. In total, 342,626 samples were extracted from the obtained data set and labelled into six classes. Segmentation results provided an individual detection rate of 97% for buffel grass and 96% for spinifex, with a global multiclass pixel-wise detection rate of 97%. Obtained results were robust against illumination changes, object rotation, occlusion, background cluttering, and floral density variation.

UAVs and Machine Learning Revolutionising Invasive Grass and Vegetation Surveys in Remote Arid Lands

PubMed Central

2018-01-01

The monitoring of invasive grasses and vegetation in remote areas is challenging, costly, and on the ground sometimes dangerous. Satellite and manned aircraft surveys can assist but their use may be limited due to the ground sampling resolution or cloud cover. Straightforward and accurate surveillance methods are needed to quantify rates of grass invasion, offer appropriate vegetation tracking reports, and apply optimal control methods. This paper presents a pipeline process to detect and generate a pixel-wise segmentation of invasive grasses, using buffel grass (Cenchrus ciliaris) and spinifex (Triodia sp.) as examples. The process integrates unmanned aerial vehicles (UAVs) also commonly known as drones, high-resolution red, green, blue colour model (RGB) cameras, and a data processing approach based on machine learning algorithms. The methods are illustrated with data acquired in Cape Range National Park, Western Australia (WA), Australia, orthorectified in Agisoft Photoscan Pro, and processed in Python programming language, scikit-learn, and eXtreme Gradient Boosting (XGBoost) libraries. In total, 342,626 samples were extracted from the obtained data set and labelled into six classes. Segmentation results provided an individual detection rate of 97% for buffel grass and 96% for spinifex, with a global multiclass pixel-wise detection rate of 97%. Obtained results were robust against illumination changes, object rotation, occlusion, background cluttering, and floral density variation. PMID:29462912

Genome Alignment Spanning Major Poaceae Lineages Reveals Heterogeneous Evolutionary Rates and Alters Inferred Dates for Key Evolutionary Events.

PubMed

Wang, Xiyin; Wang, Jingpeng; Jin, Dianchuan; Guo, Hui; Lee, Tae-Ho; Liu, Tao; Paterson, Andrew H

2015-06-01

Multiple comparisons among genomes can clarify their evolution, speciation, and functional innovations. To date, the genome sequences of eight grasses representing the most economically important Poaceae (grass) clades have been published, and their genomic-level comparison is an essential foundation for evolutionary, functional, and translational research. Using a formal and conservative approach, we aligned these genomes. Direct comparison of paralogous gene pairs all duplicated simultaneously reveal striking variation in evolutionary rates among whole genomes, with nucleotide substitution slowest in rice and up to 48% faster in other grasses, adding a new dimension to the value of rice as a grass model. We reconstructed ancestral genome contents for major evolutionary nodes, potentially contributing to understanding the divergence and speciation of grasses. Recent fossil evidence suggests revisions of the estimated dates of key evolutionary events, implying that the pan-grass polyploidization occurred ∼96 million years ago and could not be related to the Cretaceous-Tertiary mass extinction as previously inferred. Adjusted dating to reflect both updated fossil evidence and lineage-specific evolutionary rates suggested that maize subgenome divergence and maize-sorghum divergence were virtually simultaneous, a coincidence that would be explained if polyploidization directly contributed to speciation. This work lays a solid foundation for Poaceae translational genomics. Copyright © 2015 The Author. Published by Elsevier Inc. All rights reserved.

Modelling the Impact of Climate Change on Soil Water Availability and Plant Community Shifts in the Colorado Plateau

NASA Astrophysics Data System (ADS)

Thomas, A.; Gill, R. A.

2016-12-01

Climate change with an accompanying decrease in soil moisture is expected to have a significant impact on the sensitive, water-limited ecosystems of America's southwestern deserts. Already, studies have documented shifts in the distributions of competing grasses and shrubs in this region, potentially altering ecosystem function. Of particular interest is the loss of desert grasses and the expansion of desert shrubs over the past three decades. The objective of this work is to use a process-based hydrological model to extrapolate site-level measurements to assess trends in soil moisture availability that may impact plant communities in the Colorado Plateau and surrounding regions. The model, SOILWAT, simulates the daily movement of water through plant and soil layers, incorporating precipitation, interception, evaporation, infiltration between soil layers, and absorption and transpiration by plants, as well as physical site characteristics. We applied SOILWAT to 50 sites that were stratified through the northern, central, and southern regions of Ephedra viridis. We focused on E. viridis because it has displaced desert grasses in plot-scale studies. The model was driven using spatially interpolated daily weather data from the PRISM climate model over a 34-year period. We found that across all years, average soil water content in the sandy soil of the region was higher in soil layers 40-60 cm deep than in the top 20 cm, and highest in the deepest layers down to 100 cm. The consistently higher margin of water in deeper layers may indicate the vulnerability of shallow-rooted grass to increasing evaporation and an advantage to deeply-rooted shrubs such as Ephedra.

Phylogeny in Defining Model Plants for Lignocellulosic Ethanol Production: A Comparative Study of Brachypodium distachyon, Wheat, Maize, and Miscanthus x giganteus Leaf and Stem Biomass

PubMed Central

Meineke, Till; Manisseri, Chithra; Voigt, Christian A.

2014-01-01

The production of ethanol from pretreated plant biomass during fermentation is a strategy to mitigate climate change by substituting fossil fuels. However, biomass conversion is mainly limited by the recalcitrant nature of the plant cell wall. To overcome recalcitrance, the optimization of the plant cell wall for subsequent processing is a promising approach. Based on their phylogenetic proximity to existing and emerging energy crops, model plants have been proposed to study bioenergy-related cell wall biochemistry. One example is Brachypodium distachyon, which has been considered as a general model plant for cell wall analysis in grasses. To test whether relative phylogenetic proximity would be sufficient to qualify as a model plant not only for cell wall composition but also for the complete process leading to bioethanol production, we compared the processing of leaf and stem biomass from the C3 grasses B. distachyon and Triticum aestivum (wheat) with the C4 grasses Zea mays (maize) and Miscanthus x giganteus, a perennial energy crop. Lambda scanning with a confocal laser-scanning microscope allowed a rapid qualitative analysis of biomass saccharification. A maximum of 108–117 mg ethanol·g−1 dry biomass was yielded from thermo-chemically and enzymatically pretreated stem biomass of the tested plant species. Principal component analysis revealed that a relatively strong correlation between similarities in lignocellulosic ethanol production and phylogenetic relation was only given for stem and leaf biomass of the two tested C4 grasses. Our results suggest that suitability of B. distachyon as a model plant for biomass conversion of energy crops has to be specifically tested based on applied processing parameters and biomass tissue type. PMID:25133818

Fine-Scale Exposure to Allergenic Pollen in the Urban Environment: Evaluation of Land Use Regression Approach.

PubMed

Hjort, Jan; Hugg, Timo T; Antikainen, Harri; Rusanen, Jarmo; Sofiev, Mikhail; Kukkonen, Jaakko; Jaakkola, Maritta S; Jaakkola, Jouni J K

2016-05-01

Despite the recent developments in physically and chemically based analysis of atmospheric particles, no models exist for resolving the spatial variability of pollen concentration at urban scale. We developed a land use regression (LUR) approach for predicting spatial fine-scale allergenic pollen concentrations in the Helsinki metropolitan area, Finland, and evaluated the performance of the models against available empirical data. We used grass pollen data monitored at 16 sites in an urban area during the peak pollen season and geospatial environmental data. The main statistical method was generalized linear model (GLM). GLM-based LURs explained 79% of the spatial variation in the grass pollen data based on all samples, and 47% of the variation when samples from two sites with very high concentrations were excluded. In model evaluation, prediction errors ranged from 6% to 26% of the observed range of grass pollen concentrations. Our findings support the use of geospatial data-based statistical models to predict the spatial variation of allergenic grass pollen concentrations at intra-urban scales. A remote sensing-based vegetation index was the strongest predictor of pollen concentrations for exposure assessments at local scales. The LUR approach provides new opportunities to estimate the relations between environmental determinants and allergenic pollen concentration in human-modified environments at fine spatial scales. This approach could potentially be applied to estimate retrospectively pollen concentrations to be used for long-term exposure assessments. Hjort J, Hugg TT, Antikainen H, Rusanen J, Sofiev M, Kukkonen J, Jaakkola MS, Jaakkola JJ. 2016. Fine-scale exposure to allergenic pollen in the urban environment: evaluation of land use regression approach. Environ Health Perspect 124:619-626; http://dx.doi.org/10.1289/ehp.1509761.

Carbon-isotopic analysis of individual pollen grains from C 3 and C 4 grasses using a spooling-wire microcombustion interface

NASA Astrophysics Data System (ADS)

Nelson, David M.; Hu, Feng Sheng; Mikucki, Jill A.; Tian, Jian; Pearson, Ann

2007-08-01

Pollen grains from grasses using the C 3 and C 4 photosynthetic pathways have distinct ranges of δ 13C values that may be used to estimate their relative abundance in paleorecords. We evaluated a spooling-wire microcombustion device interfaced with an isotope-ratio mass spectrometer (SWiM-IRMS) for δ 13C analysis of individual grass-pollen grains. Pollen from four C 3 and four C 4 grass species was isolated through micromanipulation and analyzed as single grains suspended in water. A carbon yield greater than the 2 σ range of the carbon content of blanks containing only water was used to distinguish samples containing pollen ("pollen present") from those not containing pollen. This criterion resulted in the exclusion of ˜45% of the 946 samples applied to the wire. The average δ 13C values (±1 σ) of the remaining samples were -26.9‰ (±6.3‰) and -11.5‰ (±9.6‰) for C 3 grasses and C 4 grasses, respectively, after blank-correcting the δ 13C data. These results suggest that the SWiM-IRMS system can be used to distinguish C 3 from C 4 grass pollen. The high variability in measured δ 13C values is likely caused by a combination of factors. These include natural isotopic variability among individual pollen grains; the relatively poor precision that can be obtained when determining δ 13C values of such small samples; and the uncertainty in the magnitude, isotopic composition, and stability of the analytical blank. Nonetheless, high percentages of individual pollen grains were correctly classified as being of either C 3 or C 4 origin. On average, 90% (range = 78-100%) of pollen grains from C 3 grasses had δ 13C values more negative than the cutoff threshold of -19.2‰; while 84% (range = 77-90%) of pollen grains from C 4 grasses had δ 13C values more positive than -19.2‰. Compared with analysis using an elemental analyzer interfaced with an IRMS (EA-IRMS), the number of pollen grains required for δ 13C-based evaluation of C 3/C 4 grass composition is many times lower with the SWiM-IRMS. Additionally, δ 13C data from the SWiM-IRMS does not need to be incorporated into a mixing model to derive estimates of the abundance of C 3 and C 4 grass pollen. Carbon-isotopic analysis of individual grass-pollen grains using the SWiM-IRMS system may help improve our understanding of the evolutionary and ecological significance of grass taxa in the paleorecord.

Kinetics of the pyrolysis of arundo, sawdust, corn stover and switch grass biomass by thermogravimetric analysis using a multi-stage model.

PubMed

Biney, Paul O; Gyamerah, Michael; Shen, Jiacheng; Menezes, Bruna

2015-03-01

A new multi-stage kinetic model has been developed for TGA pyrolysis of arundo, corn stover, sawdust and switch grass that accounts for the initial biomass weight (W0). The biomass were decomposed in a nitrogen atmosphere from 23°C to 900°C in a TGA at a single 20°C/min ramp rate in contrast with the isoconversion technique. The decomposition was divided into multiple stages based on the absolute local minimum values of conversion derivative, (dx/dT), obtained from DTG curves. This resulted in three decomposition stages for arundo, corn stover and sawdust and four stages for switch grass. A linearized multi-stage model was applied to the TGA data for each stage to determine the pre-exponential factor, activation energy, and reaction order. The activation energies ranged from 54.7 to 60.9 kJ/mol, 62.9 to 108.7 kJ/mol, and 18.4 to 257.9 kJ/mol for the first, second and the third decomposition stages respectively. Copyright © 2014 Elsevier Ltd. All rights reserved.

Oxygen isotope fractionations across individual leaf carbohydrates in grass and tree species.

PubMed

Lehmann, Marco M; Gamarra, Bruno; Kahmen, Ansgar; Siegwolf, Rolf T W; Saurer, Matthias

2017-08-01

Almost no δ 18 O data are available for leaf carbohydrates, leaving a gap in the understanding of the δ 18 O relationship between leaf water and cellulose. We measured δ 18 O values of bulk leaf water (δ 18 O LW ) and individual leaf carbohydrates (e.g. fructose, glucose and sucrose) in grass and tree species and δ 18 O of leaf cellulose in grasses. The grasses were grown under two relative humidity (rH) conditions. Sucrose was generally 18 O-enriched compared with hexoses across all species with an apparent biosynthetic fractionation factor (ε bio ) of more than 27‰ relative to δ 18 O LW , which might be explained by isotopic leaf water and sucrose synthesis gradients. δ 18 O LW and δ 18 O values of carbohydrates and cellulose in grasses were strongly related, indicating that the leaf water signal in carbohydrates was transferred to cellulose (ε bio  = 25.1‰). Interestingly, damping factor p ex p x , which reflects oxygen isotope exchange with less enriched water during cellulose synthesis, responded to rH conditions if modelled from δ 18 O LW but not if modelled directly from δ 18 O of individual carbohydrates. We conclude that δ 18 O LW is not always a good substitute for δ 18 O of synthesis water due to isotopic leaf water gradients. Thus, compound-specific δ 18 O analyses of individual carbohydrates are helpful to better constrain (post-)photosynthetic isotope fractionation processes in plants. © 2017 John Wiley & Sons Ltd.

Grass pollen allergens globally: the contribution of subtropical grasses to burden of allergic respiratory diseases.

PubMed

Davies, J M

2014-06-01

Grass pollens of the temperate (Pooideae) subfamily and subtropical subfamilies of grasses are major aeroallergen sources worldwide. The subtropical Chloridoideae (e.g. Cynodon dactylon; Bermuda grass) and Panicoideae (e.g. Paspalum notatum; Bahia grass) species are abundant in parts of Africa, India, Asia, Australia and the Americas, where a large and increasing proportion of the world's population abide. These grasses are phylogenetically and ecologically distinct from temperate grasses. With the advent of global warming, it is conceivable that the geographic distribution of subtropical grasses and the contribution of their pollen to the burden of allergic rhinitis and asthma will increase. This review aims to provide a comprehensive synthesis of the current global knowledge of (i) regional variation in allergic sensitivity to subtropical grass pollens, (ii) molecular allergenic components of subtropical grass pollens and (iii) allergic responses to subtropical grass pollen allergens in relevant populations. Patients from subtropical regions of the world show higher allergic sensitivity to grass pollens of Chloridoideae and Panicoideae grasses, than to temperate grass pollens. The group 1 allergens are amongst the allergen components of subtropical grass pollens, but the group 5 allergens, by which temperate grass pollen extracts are standardized for allergen content, appear to be absent from both subfamilies of subtropical grasses. Whilst there are shared allergenic components and antigenic determinants, there are additional clinically relevant subfamily-specific differences, at T- and B-cell levels, between pollen allergens of subtropical and temperate grasses. Differential immune recognition of subtropical grass pollens is likely to impact upon the efficacy of allergen immunotherapy of patients who are primarily sensitized to subtropical grass pollens. The literature reviewed herein highlights the clinical need to standardize allergen preparations for both types of subtropical grass pollens to achieve optimal diagnosis and treatment of patients with allergic respiratory disease in subtropical regions of the world. © 2014 John Wiley & Sons Ltd.

Grass-specific CD4(+) T-cells exhibit varying degrees of cross-reactivity, implications for allergen-specific immunotherapy.

PubMed

Archila, L D; DeLong, J H; Wambre, E; James, E A; Robinson, D M; Kwok, W W

2014-07-01

Conceptually, allergic responses may involve cross-reactivity by antibodies or T-cells. While IgE cross-reactivity among grass-pollen allergens has been observed, cross-reactivity at the allergen-specific T-cell level has been less documented. Identification of the patterns of cross-reactivity may improve our understanding, allowing optimization of better immunotherapy strategies. We use Phleum pratense as model for the studying of cross-reactivity at the allergen-specific CD4(+) T cell level among DR04:01 restricted Pooideae grass-pollen T-cell epitopes. After in vitro culture of blood mono-nucleated cells from grass-pollen-allergic subjects with specific Pooideae antigenic epitopes, dual tetramer staining with APC-labelled DR04:01/Phleum pratense tetramers and PE-labelled DR04:01/Pooideae grass homolog tetramers was assessed to identify cross-reactivity among allergen-specific DR04:01-restricted T-cells in six subjects. Direct ex vivo staining enabled the comparison of frequency and phenotype of different Pooideae grass-pollen reactive T-cells. Intracellular cytokine staining (ICS) assays were also used to examine phenotypes of these T-cells. T-cells with various degrees of cross-reactive profiles could be detected. Poa p 1 97-116 , Lol p 1 221-240 , Lol p 5a 199-218 , and Poa p 5a 199-218 were identified as minimally cross-reactive T-cell epitopes that do not show cross-reactivity to Phl p 1 and Phl p 5a epitopes. Ex vivo tetramer staining assays demonstrated T-cells that recognized these minimally cross-reactive T-cell epitopes are present in Grass-pollen-allergic subjects. Our results suggest that not all Pooideae grass epitopes with sequence homology are cross-reactive. Non-cross-reactive T-cells with comparable frequency, phenotype and functionality to Phl p-specific T-cells suggest that a multiple allergen system should be considered for immunotherapy instead of a mono-allergen system. © 2014 John Wiley & Sons Ltd.

Satellite Phenology Observations Inform Peak Season of Allergenic Grass Pollen Aerobiology across Two Continents

NASA Astrophysics Data System (ADS)

Huete, A. R.; Devadas, R.; Davies, J.

2015-12-01

Pollen exposure and prevalence of allergenic diseases have increased in many parts of the world during the last 30 years, with exposure to aeroallergen grass pollen expected to intensify with climate change, raising increased concerns for allergic diseases. The primary contributing factors to higher allergenic plant species presence are thought to be climate change, land conversion, and biotic mixing of species. Conventional methods for monitoring airborne pollen are hampered by a lack of sampling sites and heavily rely on meteorology with less attention to land cover updates and monitoring of key allergenic species phenology stages. Satellite remote sensing offers an alternative method to overcome the restrictive coverage afforded by in situ pollen networks by virtue of its synoptic coverage and repeatability of measurements that enable timely updates of land cover and land use information and monitoring landscape dynamics and interactions with human activity and climate. In this study, we assessed the potential of satellite observations of urban/peri-urban environments to directly inform landscape conditions conducive to pollen emissions. We found satellite measurements of grass cover phenological evolution to be highly correlated with in situ aerobiological grass pollen concentrations in five urban centres located across two hemispheres (Australia and France). Satellite greenness data from the Moderate Resolution Imaging Spectroradiometer (MODIS) were found to be strongly synchronous with grass pollen aerobiology in both temperate grass dominated sites (France and Melbourne), as well as in Sydney, where multiple pollen peaks coincided with the presence of subtropical grasses. Employing general additive models (GAM), the satellite phenology data provided strong predictive capabilities to inform airborne pollen levels and forecast periods of grass pollen emissions at all five sites. Satellite phenology offer promising opportunities of improving public health risk management through dissemination of timely data for use in public health action and alerts and to minimise the impact of these common chronic conditions.

50 CFR 21.49 - Control order for resident Canada geese at airports and military airfields.

Code of Federal Regulations, 2011 CFR

2011-10-01

..., (F) Registered animal drugs, pesticides, and repellants, (G) Cervical dislocation, and (H) CO2..., fleshy owl's clover, Colusa grass, hairy Orcutt grass, Solano grass, Greene's tuctoria, Sacramento Valley Orcutt grass, San Joaquin Valley Orcutt grass, slender Orcutt grass, California Orcutt grass, spreading...

50 CFR 21.49 - Control order for resident Canada geese at airports and military airfields.

Code of Federal Regulations, 2010 CFR

2010-10-01

..., (F) Registered animal drugs, pesticides, and repellants, (G) Cervical dislocation, and (H) CO2..., fleshy owl's clover, Colusa grass, hairy Orcutt grass, Solano grass, Greene's tuctoria, Sacramento Valley Orcutt grass, San Joaquin Valley Orcutt grass, slender Orcutt grass, California Orcutt grass, spreading...

50 CFR 21.50 - Depredation order for resident Canada geese nests and eggs.

Code of Federal Regulations, 2010 CFR

2010-10-01

... goldfields, Hoover's spurge, fleshy owl's clover, Colusa grass, hairy Orcutt grass, Solano grass, Greene's tuctoria, Sacramento Valley Orcutt grass, San Joaquin Valley Orcutt grass, slender Orcutt grass, California Orcutt grass, spreading navarretia, and San Jacinto Valley crownscale. (e) Can the depredation order be...

50 CFR 21.50 - Depredation order for resident Canada geese nests and eggs.

Code of Federal Regulations, 2011 CFR

2011-10-01

... goldfields, Hoover's spurge, fleshy owl's clover, Colusa grass, hairy Orcutt grass, Solano grass, Greene's tuctoria, Sacramento Valley Orcutt grass, San Joaquin Valley Orcutt grass, slender Orcutt grass, California Orcutt grass, spreading navarretia, and San Jacinto Valley crownscale. (e) Can the depredation order be...

Fuel buildup and potential fire behavior after stand-replacing fires, logging fire-killed trees and herbicide shrub removal in Sierra Nevada forests

USGS Publications Warehouse

McGinnis, Thomas W.; Keeley, Jon E.; Stephens, Scott L.; Roller, Gary B.

2010-01-01

Typically, after large stand-replacing fires in mid-elevation Sierra Nevada forests, dense shrub fields occupy sites formerly occupied by mature conifers, until eventually conifers overtop and shade out shrubs. Attempting to reduce fuel loads and expedite forest regeneration in these areas, the USDA Forest Service often disrupts this cycle by the logging of fire-killed trees, replanting of conifers and killing of shrubs. We measured the effects of these treatments on live and dead fuel loads and alien species and modeled potential fire behavior and fire effects on regenerating forests. Sampling occurred in untreated, logged and herbicide-treated stands throughout the Sierra Nevada in four large fire areas 4–21 years after stand-replacing fires. Logging fire-killed trees significantly increased total available dead fuel loads in the short term but did not affect shrub cover, grass and forb cover, alien species cover or alien species richness. Despite the greater available dead fuel loads, fire behavior was not modeled to be different between logged and untreated stands, due to abundant shrub fuels in both logged and untreated stands. In contrast, the herbicide treatment directed at shrubs resulted in extremely low shrub cover, significantly greater alien species richness and significantly greater alien grass and forb cover. Grass and forb cover was strongly correlated with solar radiation on the ground, which may be the primary reason that grass and forb cover was higher in herbicide treated stands with low shrub and tree cover. Repeat burning exacerbated the alien grass problem in some stands. Although modeled surface fire flame lengths and rates of spread were found to be greater in stands dominated by shrubs, compared to low shrub cover conifer plantations, surface fire would still be intense enough to kill most trees, given their small size and low crown heights in the first two decades after planting.

Plant nitrogen dynamics and nitrogen-use strategies under altered nitrogen seasonality and competition.

PubMed

Yuan, Zhiyou; Liu, Weixing; Niu, Shuli; Wan, Shiqiang

2007-10-01

Numerous studies have examined the effects of climatic factors on the distribution of C(3) and C(4) grasses in various regions throughout the world, but the role of seasonal fluctuations in temperature, precipitation and soil N availability in regulating growth and competition of these two functional types is still not well understood. This report is about the effects of seasonality of soil N availability and competition on plant N dynamics and N-use strategies of one C(3) (Leymus chinensis) and one C(4) (Chloris virgata) grass species. Leymus chinensis and C. virgata, two grass species native to the temperate steppe in northern China, were planted in a monoculture and a mixture under three different N seasonal availabilities: an average model (AM) with N evenly distributed over the growing season; a one-peak model (OM) with more N in summer than in spring and autumn; and a two-peak model (TM) with more N in spring and autumn than in summer. The results showed that the altered N seasonality changed plant N concentration, with the highest value of L. chinensis under the OM treatment and C. virgata under the TM treatment, respectively. N seasonality also affected plant N content, N productivity and N-resorption efficiency and proficiency in both the C(3) and C(4) species. Interspecific competition influenced N-use and resorption efficiency in both the C(3) and C(4) species, with higher N-use and resorption efficiency in the mixture than in monoculture. The C(4) grass had higher N-use efficiency than the C(3) grass due to its higher N productivity, irrespective of the N treatment or competition. The observations suggest that N-use strategies in the C(3) and C(4) species used in the study were closely related to seasonal dynamics of N supply and competition. N seasonality might be involved in the growth and temporal niche separation between C(3) and C(4) species observed in the natural ecosystems.

Evaluation and comparison of gross primary production estimates for the Northern Great Plains grasslands

USGS Publications Warehouse

Zhang, Li; Wylie, Bruce K.; Loveland, Thomas R.; Fosnight, Eugene A.; Tieszen, Larry L.; Ji, Lei; Gilmanov, Tagir

2007-01-01

Two spatially-explicit estimates of gross primary production (GPP) are available for the Northern Great Plains. An empirical piecewise regression (PWR) GPP model was developed from flux tower measurements to map carbon flux across the region. The Moderate Resolution Imaging Spectrometer (MODIS) GPP model is a process-based model that uses flux tower data to calibrate its parameters. Verification and comparison of the regional PWR GPP and the global MODIS GPP are important for the modeling of grassland carbon flux. This study compared GPP estimates from PWR and MODIS models with five towers in the grasslands. Among them, PWR GPP and MODIS GPP showed a good agreement with tower-based GPP at three towers. The global MODIS GPP, however, did not agree well with tower-based GPP at two other towers, probably because of the insensitivity of MODIS model to regional ecosystem and climate change and extreme soil moisture conditions. Cross-validation indicated that the PWR model is relatively robust for predicting regional grassland GPP. However, the PWR model should include a wide variety of flux tower data as the training data sets to obtain more accurate results.In addition, GPP maps based on the PWR and MODIS models were compared for the entire region. In the northwest and south, PWR GPP was much higher than MODIS GPP. These areas were characterized by the higher water holding capacity with a lower proportion of C4 grasses in the northwest and a higher proportion of C4 grasses in the south. In the central and southeastern regions, PWR GPP was much lower than MODIS GPP under complicated conditions with generally mixed C3/C4 grasses. The analysis indicated that the global MODIS GPP model has some limitations on detecting moisture stress, which may have been caused by the facts that C3 and C4 grasses are not distinguished, water stress is driven by vapor pressure deficit (VPD) from coarse meteorological data, and MODIS land cover data are unable to differentiate the sub-pixel cropland components.

An analysis of specific lower extremity injury rates on grass and FieldTurf playing surfaces in National Football League Games: 2000-2009 seasons.

PubMed

Hershman, Elliott B; Anderson, Robert; Bergfeld, John A; Bradley, James P; Coughlin, Michael J; Johnson, Robert J; Spindler, Kurt P; Wojtys, Edward; Powell, John W

2012-10-01

Players in the National Football League (NFL) sustain injuries every season as the result of their participation. One factor associated with the rate of injury is the type of playing surface on which the players participate. There is no difference in the rate of knee sprains and ankle sprains during NFL games when comparing rates of those injuries during games played on natural grass surfaces with rates of those injuries during games played on the artificial surface FieldTurf. Descriptive epidemiology study. The NFL records injury and exposure (ie, game) data as part of its injury surveillance system. During the 2000-2009 NFL seasons, there were 2680 games (5360 team games) played on grass or artificial surfaces. Specifically, 1356 team games were played on FieldTurf and 4004 team games were played on grass. We examined the 2000-2009 game-related injury data from those games as recorded by the injury surveillance system. The data included the injury diagnosis, the date of injury, and the surface at the time of injury. The injury data showed that 1528 knee sprains and 1503 ankle sprains occurred during those games. We calculated injury rates for knee sprains and ankle sprains-specifically, medial collateral ligament (MCL) sprains, anterior cruciate ligament (ACL) sprains, eversion ankle sprains, and inversion ankle sprains-using incidence density ratios (IDRs). We used a Poisson model and logistic regression odds ratios to validate the IDR analysis. A multivariate logistic regression model was used to adjust the odds ratio for weather conditions. The observed injury rate of knee sprains on FieldTurf was 22% (IDR = 1.22, 95% confidence interval [CI], 1.09-1.36) higher than on grass, and the injury rate of ankle sprains on FieldTurf was 22% (IDR = 1.22, 95% CI, 1.09-1.36) higher than on grass. These differences are statistically significant. Specifically, the observed injury rates of ACL sprains and eversion ankle sprains on FieldTurf surfaces were 67% (P < .001) and 31% (P < .001) higher than on grass surfaces and were statistically significant. The observed injury rates of MCL sprains and inversion ankle sprains were also not significantly higher on FieldTurf surfaces (P = .689 and .390, respectively). Injury rates for ACL sprains and eversion ankle sprains for NFL games played on FieldTurf were higher than rates for those injuries in games played on grass, and the differences were statistically significant.

Predicting foundation bunchgrass species abundances: Model-assisted decision-making in protected-area sagebrush steppe

USGS Publications Warehouse

Rodhouse, Thomas J.; Irvine, Kathryn M.; Sheley, Roger L.; Smith, Brenda S.; Hoh, Shirley; Esposito, Daniel M.; Mata-Gonzalez, Ricardo

2014-01-01

Foundation species are structurally dominant members of ecological communities that can stabilize ecological processes and influence resilience to disturbance and resistance to invasion. Being common, they are often overlooked for conservation but are increasingly threatened from land use change, biological invasions, and over-exploitation. The pattern of foundation species abundances over space and time may be used to guide decision-making, particularly in protected areas for which they are iconic. We used ordinal logistic regression to identify the important environmental influences on the abundance patterns of bluebunch wheatgrass (Pseudoroegneria spicata), Thurber's needlegrass (Achnatherum thurberianum), and Sandberg bluegrass (Poa secunda) in protected-area sagebrush steppe. We then predicted bunchgrass abundances along gradients of topography, disturbance, and invasive annual grass abundance. We used model predictions to prioritize the landscape for implementation of a management and restoration decision-support tool. Models were fit to categorical estimates of grass cover obtained from an extensive ground-based monitoring dataset. We found that remnant stands of abundant wheatgrass and bluegrass were associated with steep north-facing slopes in higher and more remote portions of the landscape outside of recently burned areas where invasive annual grasses were less abundant. These areas represented only 25% of the landscape and were prioritized for protection efforts. Needlegrass was associated with south-facing slopes, but in low abundance and in association with invasive cheatgrass (Bromus tectorum). Abundances of all three species were strongly negatively correlated with occurrence of another invasive annual grass, medusahead (Taeniatherum caput-medusae). The rarity of priority bunchgrass stands underscored the extent of degradation and the need for prioritization. We found no evidence that insularity reduced invasibility; annual grass invasion represents a serious threat to protected-area bunchgrass communities. Our study area was entirely within the Wyoming big sagebrush ecological zone, understood to have inherently low resilience to disturbance and resistance to weed invasion. However, our study revealed important variation in abundance of the foundation species associated with resilience and resistance along the topographic-soil moisture gradient within this zone, providing an important foothold for conservation decision-making in these steppe ecosystems. We found the foundation species focus a parsimonious strategy linking monitoring to decision-making via biogeographic modeling.

Classification of grass pollen through the quantitative analysis of surface ornamentation and texture.

PubMed

Mander, Luke; Li, Mao; Mio, Washington; Fowlkes, Charless C; Punyasena, Surangi W

2013-11-07

Taxonomic identification of pollen and spores uses inherently qualitative descriptions of morphology. Consequently, identifications are restricted to categories that can be reliably classified by multiple analysts, resulting in the coarse taxonomic resolution of the pollen and spore record. Grass pollen represents an archetypal example; it is not routinely identified below family level. To address this issue, we developed quantitative morphometric methods to characterize surface ornamentation and classify grass pollen grains. This produces a means of quantifying morphological features that are traditionally described qualitatively. We used scanning electron microscopy to image 240 specimens of pollen from 12 species within the grass family (Poaceae). We classified these species by developing algorithmic features that quantify the size and density of sculptural elements on the pollen surface, and measure the complexity of the ornamentation they form. These features yielded a classification accuracy of 77.5%. In comparison, a texture descriptor based on modelling the statistical distribution of brightness values in image patches yielded a classification accuracy of 85.8%, and seven human subjects achieved accuracies between 68.33 and 81.67%. The algorithmic features we developed directly relate to biologically meaningful features of grass pollen morphology, and could facilitate direct interpretation of unsupervised classification results from fossil material.

Associations between grass and weed pollen and emergency department visits for asthma among children in Montreal.

PubMed

Héguy, Léa; Garneau, Michelle; Goldberg, Mark S; Raphoz, Marie; Guay, Frédéric; Valois, Marie-France

2008-02-01

Asthma among children is a major public health problem worldwide. There are increasing number of studies suggesting a possible association between allergenic pollen and exacerbations of asthma. In the context of global climate change, a number of future climate and air pollution scenarios predict increases in concentrations of pollen, an extension of the pollen season, and an increase in the allergenicity of pollen. The goal of the present study is to evaluate the short-term effects of exposure to grass and weed pollen on emergency department visits and readmissions for asthma among children aged 0-9 years living in Montreal between April and October, 1994-2004. Time-series analyses were carried out using parametric log-linear overdispersed Poisson models that were adjusted for temporal variations, daily weather conditions (temperature, atmospheric pressure), and gaseous air pollutants (ozone and nitrogen dioxide). We have found positive associations between emergency department visits and concentrations of grass pollen 3 days after exposure. The effect of grass pollen was higher on emergency department readmissions as compared to initial visits. Weak negative associations were found between weed pollen (including ragweed pollen) and emergency department visits 2 days after exposure. The data indicate that among children, emergency department visits increased with increasing concentrations of grass pollen.

Potential and limitations of using digital repeat photography to track structural and physiological phenology in Mediterranean tree-grass ecosystems

NASA Astrophysics Data System (ADS)

Luo, Yunpeng; EI-Madany, Tarek; Filippa, Gianluca; Carrara, Arnaud; Cremonese, Edoardo; Galvagno, Marta; Hammer, Tiana; Pérez-Priego, Oscar; Reichstein, Markus; Martín Isabel, Pilar; González Cascón, Rosario; Migliavacca, Mirco

2017-04-01

Tree-Grass ecosystems are global widely distributed (16-35% of the land surface). However, its phenology (especially in water-limited areas) has not yet been well characterized and modeled. By using commercial digital cameras, continuous and relatively vast phenology data becomes available, which provides a good opportunity to monitor and develop a robust method used to extract the important phenological events (phenophases). Here we aimed to assess the usability of digital repeat photography for three Tree-Grass Mediterranean ecosystems over two different growing seasons (Majadas del Tietar, Spain) to extract critical phenophases for grass and evergreen broadleaved trees (autumn regreening of grass- Start of growing season; resprouting of tree leaves; senescence of grass - End of growing season), assess their uncertainty, and to correlate them with physiological phenology (i.e. phenology of ecosystem scale fluxes such as Gross Primary Productivity, GPP). We extracted green chromatic coordinates (GCC) and camera based normalized difference vegetation index (Camera-NDVI) from an infrared enabled digital camera using the "Phenopix" R package. Then we developed a novel method to retrieve important phenophases from GCC and Camera-NDVI from various region of interests (ROIs) of the imagery (tree areas, grass, and both - ecosystem) as well as from GPP, which was derived from Eddy Covariance tower in the same experimental site. The results show that, at ecosystem level, phenophases derived from GCC and Camera-NDVI are strongly correlated (R2 = 0.979). Remarkably, we observed that at the end of growing season phenophases derived from GCC were systematically advanced (ca. 8 days) than phenophase from Camera-NDVI. By using the radiative transfer model Soil Canopy Observation Photochemistry and Energy (SCOPE) we demonstrated that this delay is related to the different sensitivity of GCC and NDVI to the fraction of green/dry grass in the canopy, resulting in a systematic higher NDVI during the dry-down of the canopy. Phenophases derived from GCC and Camera-NDVI are correlated with phenophase extracted from GPP across sites and years (R2 =0.966 and 0.976 respectively). For the start of growing season the determination coefficient was higher (R2 =0.89 and 0.98 for GCC vs GPP and Camera-NDVI vs GPP, respectively) than for the end of growing season (R2 =0.75 and 0.70, for GCC and Camera-NDVI, respectively). The statistics obtained using phenophases derived from grass or ecosystem ROI are similar. In contrast, GCC and Camera-NDVI derived from trees ROI are relatively constant and not related to the seasonality of GPP. However, the GCC of tree shows a characteristic peak that is synchronous to leaf flushing in spring assessed using regular Chlorophyll content measurements and automatic dendrometers. Concluding, we first developed a method to derive phenological events of Tree-Grass ecosystems using digital repeat photography, second we demonstrated that the phenology of GPP is strongly dominated by the phenology of grassland layer, third we discussed the uncertainty related to the use of GCC and Camera-NDVI in senescence, and finally we demonstrate the capability of GCC to track in evergreen broadleaved forest crucial phenological events. Our findings confirm digital repeat photography is a vital data source for characterizing phenology in Mediterranean Tree-Grass Ecosystem.

Characterizing the spatio-temporal variations of C3 and C4 dominated grasslands aboveground biomass in the Drakensberg, South Africa

NASA Astrophysics Data System (ADS)

Shoko, Cletah; Mutanga, Onisimo; Dube, Timothy; Slotow, Rob

2018-06-01

C3 and C4 grass species composition, with different physiological, morphological and most importantly phenological characteristics, influence Aboveground Biomass (AGB) and their ability to provide ecosystem goods and services, over space and time. For decades, the lack of appropriate remote sensing data sources compromised C3 and C4 grasses AGB estimation, over space and time. This resulted in uncertainties in understanding their potential and contribution to the provision of services. This study therefore examined the utility of the new multi-temporal Sentinel 2 to estimate and map C3 and C4 grasses AGB over time, using the advanced Sparse Partial Least Squares Regression (SPLSR) model. Overall results have shown the variability in AGB between C3 and C4 grasses, estimation accuracies and the performance of the SPLSR model, over time. Themeda (C4) produced higher AGB from February to April, whereas from May to September, Festuca produced higher AGB. Both species also showed a decrease in AGB in August and September, although this was most apparent for Themeda than its counterpart. Spectral bands information predicted species AGB with lowest accuracies and an improvement was observed when both spectral bands and vegetation indices were applied. For instance, in the month of May, spectral bands predicted species AGB with lowest accuracies for Festuca (R2 = 0.57; 31.70% of the mean), Themeda (R2 = 0.59; 24.02% of the mean) and combined species (R2 = 0.61; 15.64% of the mean); the use of spectral bands and vegetation indices yielded 0.77; (18.64%), 0.75 (14.27%) and 0.73 (16.47%), for Festuca, Themeda and combined species, respectively. The red edge (at 0.705 and 0.74 μm) and derived indices, NIR and SWIR 2 (2.19 μm) were found to contribute more to grass species AGB estimation, over time. Findings have also revealed the potential of the SPLSR model in estimating C3 and C4 grasses AGB using Sentinel 2 images, over time. The AGB spatial variability maps produced in this study can be used to quantify C3 and C4 forage availability or accumulating fuel, as well as for developing operational management strategies.

Plant water use affects competition for nitrogen: why drought favors invasive species in California.

PubMed

Everard, Katherine; Seabloom, Eric W; Harpole, W Stanley; de Mazancourt, Claire

2010-01-01

Abstract: Classic resource competition theory typically treats resource supply rates as independent; however, nutrient supplies can be affected by plants indirectly, with important consequences for model predictions. We demonstrate this general phenomenon by using a model in which competition for nitrogen is mediated by soil moisture, with competitive outcomes including coexistence and multiple stable states as well as competitive exclusion. In the model, soil moisture regulates nitrogen availability through soil moisture dependence of microbial processes, leaching, and plant uptake. By affecting water availability, plants also indirectly affect nitrogen availability and may therefore alter the competitive outcome. Exotic annual species from the Mediterranean have displaced much of the native perennial grasses in California. Nitrogen and water have been shown to be potentially limiting in this system. We parameterize the model for a Californian grassland and show that soil moisture-mediated competition for nitrogen can explain the annual species' dominance in drier areas, with coexistence expected in wetter regions. These results are concordant with larger biogeographic patterns of grassland invasion in the Pacific states of the United States, in which annual grasses have invaded most of the hot, dry grasslands in California but perennial grasses dominate the moister prairies of northern California, Oregon, and Washington.

ECOSYS-87: Model calculations of the activity in cattle meat related to deposition time and feeding regimes after a nuclear fallout

DOE Office of Scientific and Technical Information (OSTI.GOV)

Riesen, T.K.; Gottofrey, J.; Heiz, H.J.

1996-12-01

The radioecological model ECOSYS087 was used to evaluate the effect of countermeasures for reducing the ingestion dose by eating cattle meat after an accidental release of radioactive material. Calculations were performed using a database adapted to Swiss conditions for the case that (1) contaminated grass or hay is replaced by clean fodder; (2) the last 100 days before slaughter, taking place one year after an accident, only uncontaminated fodder is given; and (3) alternative feeding regimes are chosen. Seasonal effects were considered by doing all calculations for a deposition at each month of the year. Feeding uncontaminated forage 100 dmore » before slaughter (case 2) proved to be the most effective countermeasure and reduced the integrated activity in meat by 90% to 99%. The effect of replacing contaminated grass (case 1) was less uniform and depended strongly on the time a deposition occurred. In this case the reduction was between 50% and 100% one year after deposition. The substitution of contaminated hay (case 1) was less effective compared to the substitution of grass. The choice of alternative feeding regimes (case 1) was less effective compared to the substitution of grass. The choice of alternative feeding regimes (case 3) led to a reduction of the integrated activity of up to 40% one year after deposition. The present model calculations clearly reveal the importance of the seasonality and demonstrate the usefulness of such calculations as a basis for generating countermeasures in decision support systems. 8 refs., 1 fig., 5 tabs.« less

Comprehensive Understanding for Vegetated Scene Radiance Relationships

NASA Technical Reports Server (NTRS)

Kimes, D. S.; Deering, D. W.

1984-01-01

Directional reflectance distributions spanning the entire existent hemisphere were measured in two field studies; one using a Mark III 3-band radiometer and one using the rapid scanning bidirectional field instrument called PARABOLA. Surfaces measured included corn, soybeans, bare soils, grass lawn, orchard grass, alfalfa, cotton row crops, plowed field, annual grassland, stipa grass, hard wheat, salt plain shrubland, and irrigated wheat. Analysis of field data showed unique reflectance distributions ranging from bare soil to complete vegetation canopies. Physical mechanisms causing these trends were proposed. A 3-D model was developed and is unique in that it predicts: (1) the directional spectral reflectance factors as a function of the sensor's azimuth and zenith angles and the sensor's position above the canopy; (2) the spectral absorption as a function of location within the scene; and (3) the directional spectral radiance as a function of the sensor's location within the scene. Initial verification of the model as applied to a soybean row crop showed that the simulated directional data corresponded relatively well in gross trends to the measured data. The model was expanded to include the anisotropic scattering properties of leaves as a function of the leaf orientation distribution in both the zenith and azimuth angle modes.

Is the Grass Always Greener? Comparing the Environmental Impact of Conventional, Natural and Grass-Fed Beef Production Systems.

PubMed

Capper, Judith L

2012-04-10

This study compared the environmental impact of conventional, natural and grass-fed beef production systems. A deterministic model based on the metabolism and nutrient requirements of the beef population was used to quantify resource inputs and waste outputs per 1.0 × 10⁸ kg of hot carcass weight beef in conventional (CON), natural (NAT) and grass-fed (GFD) production systems. Production systems were modeled using characteristic management practices, population dynamics and production data from U.S. beef production systems. Increased productivity (slaughter weight and growth rate) in the CON system reduced the cattle population size required to produce 1.0 × 10⁸ kg of beef compared to the NAT or GFD system. The CON system required 56.3% of the animals, 24.8% of the water, 55.3% of the land and 71.4% of the fossil fuel energy required to produce 1.0 × 10⁸ kg of beef compared to the GFD system. The carbon footprint per 1.0 × 10⁸ kg of beef was lowest in the CON system (15,989 × 10³ t), intermediate in the NAT system (18,772 × 10³ t) and highest in the GFD system (26,785 × 10³ t). The challenge to the U.S beef industry is to communicate differences in system environmental impacts to facilitate informed dietary choice.

25 CFR 309.12 - What are examples of basketry that are Indian products?

Code of Federal Regulations, 2011 CFR

2011-04-01

..., spruce root, rye grass, sweet grass, yucca, bear grass, beach grass, rabbit brush, fiber, maidenhair fern..., pine needle/raffia effigy baskets, oak splint and braided sweet grass fancy baskets, birchbark containers, baleen baskets, rye grass dance fans, brown ash strawberry baskets, sumac wedding baskets, cedar...

25 CFR 309.12 - What are examples of basketry that are Indian products?

Code of Federal Regulations, 2010 CFR

2010-04-01

..., spruce root, rye grass, sweet grass, yucca, bear grass, beach grass, rabbit brush, fiber, maidenhair fern..., pine needle/raffia effigy baskets, oak splint and braided sweet grass fancy baskets, birchbark containers, baleen baskets, rye grass dance fans, brown ash strawberry baskets, sumac wedding baskets, cedar...

An Open-Source Approach for Catchment's Physiographic Characterization

NASA Astrophysics Data System (ADS)

Di Leo, M.; Di Stefano, M.

2013-12-01

A water catchment's hydrologic response is intimately linked to its morphological shape, which is a signature on the landscape of the particular climate conditions that generated the hydrographic basin over time. Furthermore, geomorphologic structures influence hydrologic regimes and land cover (vegetation). For these reasons, a basin's characterization is a fundamental element in hydrological studies. Physiographic descriptors have been extracted manually for long time, but currently Geographic Information System (GIS) tools ease such task by offering a powerful instrument for hydrologists to save time and improve accuracy of result. Here we present a program combining the flexibility of the Python programming language with the reliability of GRASS GIS, which automatically performing the catchment's physiographic characterization. GRASS (Geographic Resource Analysis Support System) is a Free and Open Source GIS, that today can look back on 30 years of successful development in geospatial data management and analysis, image processing, graphics and maps production, spatial modeling and visualization. The recent development of new hydrologic tools, coupled with the tremendous boost in the existing flow routing algorithms, reduced the computational time and made GRASS a complete toolset for hydrological analysis even for large datasets. The tool presented here is a module called r.basin, based on GRASS' traditional nomenclature, where the "r" stands for "raster", and it is available for GRASS version 6.x and more recently for GRASS 7. As input it uses a Digital Elevation Model and the coordinates of the outlet, and, powered by the recently developed r.stream.* hydrological tools, it performs the flow calculation, delimits the basin's boundaries and extracts the drainage network, returning the flow direction and accumulation, the distance to outlet and the hill slopes length maps. Based on those maps, it calculates hydrologically meaningful shape factors and morphological parameters such as topological diameter, drainage density, Horton's ratios, concentration time, and many more, beside producing statistics on main channel and elevation and geometric features such as centroid's coordinates, rectangle containing the basin, etc. Exploiting Python libraries, such as Numpy and Matplotlib, it produces graphics like the hypsographic and hypsometric curve and the Width Function. The results are exported as a spreadsheet in CSV format and graphics as pngs. The advantages offered by the implementation in Python and GRASS are manifold. Python is a powerful scripting language with huge potential for researchers due to its relative simplicity, high flexibility and thanks to a broad availability of scientific libraries. GRASS, and as a consequence, r.basin, is platform independent, so that it is available for GNU/Linux, MS Windows, Mac, etc. Furthermore, the module is constantly maintained and improved according to users' feedback with the precious help of expert developers. The code is available for review under the official GRASS add-ons repository, allowing hydrologists and researchers to knowingly use, inspect, modify, reuse, and even incorporate it in other projects, such as web services.

76 FR 26927 - National Organic Program; Notice on the Ruminant Slaughter Stock Provision of the Access to...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-10

... Received on Labeling and Grass-Fed Products Many commenters suggested that there is a place for both grass... labeling system: ``Organic--Grass Fed/Grain Finished,'' ``Organic--Grass Fed/Finished on Pasture with Supplemental Grain Feeding,'' ``Organic--100% Grass Fed/Grass Finished.'' Their recommendation suggested that...

Exotic Grass Yields Under Southern Pines

Treesearch

H.A. Pearson

1975-01-01

Kentucky 31 and Kenwell tall fescue, Pensacola bahia, and Brunswick grasses yielded nea,rly three times more forage under an established pine stand than native grasses 7 years after seeding. Introducing exotic grasses did not significantly increase total grass production but did enhance range quality since the cool-season grasses are green during winter and are higher...

Assessing the Impacts of Land Use Change from Cotton to Perennial Bioenergy Grasses on Hydrological Fluxes and Water Quality in a Semi-Arid Agricultural Watershed Using the APEX Model

NASA Astrophysics Data System (ADS)

Chen, Y.; Ale, S.; Rajan, N.

2015-12-01

The semi-arid Texas High Plains (THP) region, where cotton (Gossypium hirsutum L.) is grown in vast acreage, has the potential to grow perennial bioenergy grasses. A change in land use from cotton cropping systems to perennial grasses such as Alamo switchgrass (Panicum virgatum L.) and Miscanthus giganteus (Miscanthus sinensis Anderss. [Poaceae]) can significantly affect regional hydrologic cycle and water quality. Assessing the impacts of this potential land use change on hydrology and water quality enables the environmental assessment of feasibility to grow perennial grasses in this region to meet the U.S. national bioenergy target of 2022. The Agricultural Policy/Environmental eXtender (APEX) model was used in this study to assess the impacts of replacing cotton with switchgrass and Miscanthus on water and nitrogen balances in the upstream subwatershed of the Double Mountain Fork Brazos watershed in the THP, which contains 52% cotton land use. The APEX model was initially calibrated against observed streamflow and crop yield data. Since observed data on nitrogen loads in streamflow was not available for this subwatershed, we calibrated the APEX model against the SWAT-simulated nitrogen loads at the outlet of this subwatershed, which were obtained in a parallel study. The calibrated APEX model was used to simulate the impacts of land use change from cotton to Miscanthus and switchgrass on surface and subsurface water and nitrogen balances. Preliminary results revealed that the average (1994-2009) annual surface runoff decreased by 84% and 66% under the irrigated and dryland switchgrass scenarios compared to the baseline scenarios. Average annual percolation increased by 106% and 57% under the irrigated and dryland switchgrass scenarios relative to the baseline scenarios. Preliminary results also indicated Miscanthus and switchgrass appeared to be superior to cotton in terms of better water conservation and water quality, and minimum crop management requirements.

VAM populations in relation to grass invasion associated with forest decline.

PubMed

Vosatka, M; Cudlin, P; Mejstrik, V

1991-01-01

Spruce stands in Northern Bohemia forests, damaged to various degrees by industrial pollution, have shown establishment of grass cover following tree defoliation. Populations of vesicular-arbuscular mycorrhizal (VAM) fungi were studied under this grass cover in four permanent plots with spruce under different levels of pollution stress. Soil and root samples were collected in April and June within each plot as follows: (1) sites without grass, (2) sites with initial stages of grass invasion, and (3) sites with fully developed grass cover. In all plots, the highest number of propagules were recovered from samples taken from sites having full grass cover. Mycorrhizal infection of grass was highest in the plot with the severest pollution damage and lowest in the least damaged plot. The development of grass cover and VAM infection of grass increased with tree defoliation caused by air pollution.

An Integrated Physical, Genetic and Cytogenetic Map of Brachypodium distachyon, a Model System for Grass Research

PubMed Central

Febrer, Melanie; Goicoechea, Jose Luis; Wright, Jonathan; McKenzie, Neil; Song, Xiang; Lin, Jinke; Collura, Kristi; Wissotski, Marina; Yu, Yeisoo; Ammiraju, Jetty S. S.; Wolny, Elzbieta; Idziak, Dominika; Betekhtin, Alexander; Kudrna, Dave; Hasterok, Robert; Wing, Rod A.; Bevan, Michael W.

2010-01-01

The pooid subfamily of grasses includes some of the most important crop, forage and turf species, such as wheat, barley and Lolium. Developing genomic resources, such as whole-genome physical maps, for analysing the large and complex genomes of these crops and for facilitating biological research in grasses is an important goal in plant biology. We describe a bacterial artificial chromosome (BAC)-based physical map of the wild pooid grass Brachypodium distachyon and integrate this with whole genome shotgun sequence (WGS) assemblies using BAC end sequences (BES). The resulting physical map contains 26 contigs spanning the 272 Mb genome. BES from the physical map were also used to integrate a genetic map. This provides an independent vaildation and confirmation of the published WGS assembly. Mapped BACs were used in Fluorescence In Situ Hybridisation (FISH) experiments to align the integrated physical map and sequence assemblies to chromosomes with high resolution. The physical, genetic and cytogenetic maps, integrated with whole genome shotgun sequence assemblies, enhance the accuracy and durability of this important genome sequence and will directly facilitate gene isolation. PMID:20976139

Grass buffers for playas in agricultural landscapes: A literature synthesis

USGS Publications Warehouse

Melcher, Cynthia P.; Skagen, Susan K.

2005-01-01

Future research should entail multiple-scale approaches at regional, wetland-complex, and individual watershed scales. Information needs include direct measures of buffer effectiveness in ‘real-world’ systems, refinement and field tests of buffer-effectiveness models, how buffers may affect floral and faunal communities of playas, and basic ecological information on playa function and playa wildlife ecology. Understanding how wildlife communities respond to patch size and habitat fragmentation is crucial for addressing questions regarding habitat quality of grass buffers in playa systems.

A GRASS GIS module to obtain an estimation of glacier behavior under climate change: A pilot study on Italian glacier

NASA Astrophysics Data System (ADS)

Strigaro, Daniele; Moretti, Massimiliano; Mattavelli, Matteo; Frigerio, Ivan; Amicis, Mattia De; Maggi, Valter

2016-09-01

The aim of this work is to integrate the Minimal Glacier Model in a Geographic Information System Python module in order to obtain spatial simulations of glacier retreat and to assess the future scenarios with a spatial representation. The Minimal Glacier Models are a simple yet effective way of estimating glacier response to climate fluctuations. This module can be useful for the scientific and glaciological community in order to evaluate glacier behavior, driven by climate forcing. The module, called r.glacio.model, is developed in a GRASS GIS (GRASS Development Team, 2016) environment using Python programming language combined with different libraries as GDAL, OGR, CSV, math, etc. The module is applied and validated on the Rutor glacier, a glacier in the south-western region of the Italian Alps. This glacier is very large in size and features rather regular and lively dynamics. The simulation is calibrated by reconstructing the 3-dimensional dynamics flow line and analyzing the difference between the simulated flow line length variations and the observed glacier fronts coming from ortophotos and DEMs. These simulations are driven by the past mass balance record. Afterwards, the future assessment is estimated by using climatic drivers provided by a set of General Circulation Models participating in the Climate Model Inter-comparison Project 5 effort. The approach devised in r.glacio.model can be applied to most alpine glaciers to obtain a first-order spatial representation of glacier behavior under climate change.

Correlation between landscape fragmentation and sandy desertification: a case study in Horqin Sandy Land, China.

PubMed

Ge, Xiaodong; Dong, Kaikai; Luloff, A E; Wang, Luyao; Xiao, Jun; Wang, Shiying; Wang, Qian

2016-01-01

The exact roles of landscape fragmentation on sandy desertification are still not fully understood, especially with the impact of different land use types in spatial dimension. Taking patch size and shape into consideration, this paper selected the Ratio of Patch Size and the Fractal Dimension Index to establish a model that reveals the association between the area of bare sand land and the fragmentation of different land use types adjacent to bare sand land. Results indicated that (1) grass land and arable land contributed the most to landscape fragmentation processes in the regions adjacent to bare sand land during the period 1980 to 2010. Grass land occupied 54 % of the region adjacent to bare sand land in 1980. The Ratio of Patch Size of grass land decreased from 1980 to 2000 and increased after 2000. The Fractal Dimension Index of grass increased during the period 1980 to 1990 and decreased after 1990. Arable land expanded significantly during this period. The Ratio of Patch Size of arable land increased from 1980 to 1990 and decreased since 1990. The Fractal Dimension Index of arable land increased from 1990 to 2000 and decreased after 2000. (2) The Ratio of Patch Size and the Fractal Dimension Index were significantly related to the area of bare sand land. The role of landscape fragmentation was not linear to sandy desertification. There were both positive and negative effects of landscape fragmentation on sandy desertification. In 1980, the Ratio of Patch Size and the Fractal Dimension Index were negatively related to the area of bare sand land, showing that the landscape fragmentation and regularity of patches contributed to the expansion of sandy desertification. In 1990, 2000, and 2010, the Ratio of Patch Size and the Fractal Dimension Index were mostly positively related to the area of bare sand land, showing the landscape fragmentation and regularity of patches contributed to the reversion of sandy desertification in this phase. The absolute values of the coefficients were the highest for grass land in the regression models, so that grass land had the most important influence on sandy desertification.

Towards reconstructing herbaceous biome dynamics and associated precipitation in Africa: insights from the classification of grass morphological traits

NASA Astrophysics Data System (ADS)

Pasturel, Marine; Alexandre, Anne; Novello, Alice; Moctar Dieye, Amadou; Wele, Abdoulaye; Paradis, Laure; Hely, Christelle

2014-05-01

Inter-tropical herbaceous ecosystems occupy a 1/5th of terrestrial surface, a half of the African continent, and are expected to extend in the next decades. Dynamic of these ecosystems is simulated with poor accuracy by Dynamic Global Vegetation Models (DGVMs). One of the bias results from the fact that the diversity of the grass layer dominating these herbaceous ecosystems is poorly taken into account. Mean annual precipitation and the length of the dry season are the main constrains of the dynamics of these ecosystems. Conversely, changes in vegetation affect the water cycle. Inaccuracy in herbaceous ecosystem simulation thus impacts simulations of the water cycle (including precipitation) and vice versa. In order to increase our knowledge of the relationships between grass morphological traits, taxonomy, biomes and climatic niches in Western and South Africa, a 3-step methodology was followed: i) values of culm height, leaf length and width of dominant grass species from Senegal were gathered from flora and clustered using the Partition Around Medoids (PAM) method; ii) trait group ability to sign climatic domains and biomes was assessed using Kruskal-Wallis tests; iii) genericity and robustness of the trait groups were evaluated through their application to Chadian and South African botanical datasets. Results show that 8 grass trait groups are present either in Senegal, Chad or South Africa. These 8 trait groups are distributed along mean annual precipitation and dry season length gradients. The combination of three of them allow to discriminate mean annual precipitation domains (<250, 250-600, 600-1000 and >1000 mm) and herbaceous biomes (steppes, savannas, South African grasslands and Nama-Karoo). With these results in hand, grass Plant Functional Types (PFTs) of the DGMV LPJ-GUESS will be re-parameterized and particular attention will be given to the herbaceous biomass assigned to each grass trait group. Simultaneously, relationships between grass trait groups and phytolith vegetation proxies will be quantified in order to reconstruct the past dynamics of herbaceous ecosystems and associated mean annual precipitation domains.

Grass fungal endophytes and uses thereof

DOEpatents

Craven, Kelly

2015-03-10

The invention provides isolated fungal endophytes and synthetic combinations thereof with host grass plants. Methods for inoculating grass plant with the endophytes, for propagating the grass-endophyte combinations, and for producing feeds and biofuels from grass-endophyte combinations are also provided.

Influence of ground surface characteristics on the mean radiant temperature in urban areas.

PubMed

Lindberg, Fredrik; Onomura, Shiho; Grimmond, C S B

2016-09-01

The effect of variations in land cover on mean radiant temperature (T mrt ) is explored through a simple scheme developed within the radiation model SOLWEIG. Outgoing longwave radiation is parameterised using surface temperature observations on a grass and an asphalt surface, whereas outgoing shortwave radiation is modelled through variations in albedo for the different surfaces. The influence of ground surface materials on T mrt is small compared to the effects of shadowing. Nevertheless, altering ground surface materials could contribute to a reduction in T mrt to reduce the radiant load during heat-wave episodes in locations where shadowing is not an option. Evaluation of the new scheme suggests that despite its simplicity it can simulate the outgoing fluxes well, especially during sunny conditions. However, it underestimates at night and in shadowed locations. One grass surface used to develop the parameterisation, with very different characteristics compared to an evaluation grass site, caused T mrt to be underestimated. The implications of using high temporal resolution (e.g. 15 minutes) meteorological forcing data under partly cloudy conditions are demonstrated even for fairly proximal sites.

Delta13C values of grasses as a novel indicator of pollution by fossil-fuel-derived greenhouse gas CO2 in urban areas.

PubMed

Lichtfouse, Eric; Lichtfouse, Michel; Jaffrézic, Anne

2003-01-01

A novel fossil fuel pollution indicator based on the 13C/12C isotopic composition of plants has been designed. This bioindicator is a promising tool for future mapping of the sequestration of fossil fuel CO2 into urban vegetation. Theoretically, plants growing in fossil-fuel-CO2-contaminated areas, such as major cities, industrial centers, and highway borders, should assimilate a mixture of global atmospheric CO2 of delta13C value of -8.02 per thousand and of fossil fuel CO2 of average delta13C value of -27.28 per thousand. This isotopic difference should, thus, be recorded in plant carbon. Indeed, this study reveals that grasses growing near a major highway in Paris, France, have strikingly depleted delta13C values, averaging at -35.08 per thousand, versus rural grasses that show an average delta13C value of -30.59 per thousand. A simple mixing model was used to calculate the contributions of fossil-fuel-derived CO2 to the plant tissue. Calculation based on contaminated and noncontaminated isotopic end members shows that urban grasses assimilate up to 29.1% of fossil-fuel-CO2-derived carbon in their tissues. The 13C isotopic composition of grasses thus represents a promising new tool for the study of the impact of fossil fuel CO2 in major cities.

Soils mediate the impact of fine woody debris on invasive and native grasses as whole trees are mechanically shredded into firebreaks in piñon-juniper woodlands

USGS Publications Warehouse

Aanderud, Zachary T.; Schoolmaster, Donald R.; Rigby, Deborah; Bybee, Jordon; Campbell, Tayte; Roundy, Bruce A.

2017-01-01

To stem wildfires, trees are being mechanically shredded into firebreaks with the resulting fine woody debris (FWD) potentially exerting immense control over soil and plants. We linked FWD-induced changes in microbial activity and nutrient availability to the frequency of Bromus tectorum and three native, perennial grasses across 31 piñon-juniper woodlands, UT, USA. Using a series of mixed models, we found that FWD increased the frequency of three of the four grasses by at least 12%. Deep, as opposed to shallow, soils mediated frequencies following FWD additions but only partially explained the variation in Bromus and Pseudoroegneria spicata. Although fertile areas associated with tree-islands elicited no response, FWD-induced increases in nitrogen mineralization in deep soils (15–17 cm) caused the frequency of the exotic and Pseudoroegneria to rise. Higher phosphorus availability in FWD-covered surface soils (0–2 cm) had no impact on grasses. FWD altered deep soil respiration, and deep and shallow microbial biomass structuring Pseudoroegneria frequencies, suggesting that microorganism themselves regulated Pseudoroegneria. The positive effects of FWD on grass frequencies intensified over time for natives but diminished for Bromus. Our results demonstrate that microorganisms in deeper soils helped mediate species-specific responses to disturbance both facilitating exotic invasion and promoting native establishment.

Desert grassland responses to climate and soil moisture suggest divergent vulnerabilities across the southwestern US

USGS Publications Warehouse

Gremer, Jennifer; Bradford, John B.; Munson, Seth M.; Duniway, Michael C.

2015-01-01

Climate change predictions include warming and drying trends, which are expected to be particularly pronounced in the southwestern United States. In this region, grassland dynamics are tightly linked to available moisture, yet it has proven difficult to resolve what aspects of climate drive vegetation change. In part, this is because it is unclear how heterogeneity in soils affects plant responses to climate. Here, we combine climate and soil properties with a mechanistic soil water model to explain temporal fluctuations in perennial grass cover, quantify where and the degree to which incorporating soil water dynamics enhances our ability to understand temporal patterns, and explore the potential consequences of climate change by assessing future trajectories of important climate and soil water variables. Our analyses focused on long-term (20 to 56 years) perennial grass dynamics across the Colorado Plateau, Sonoran, and Chihuahuan Desert regions. Our results suggest that climate variability has negative effects on grass cover, and that precipitation subsidies that extend growing seasons are beneficial. Soil water metrics, including the number of dry days and availability of water from deeper (>30 cm) soil layers, explained additional grass cover variability. While individual climate variables were ranked as more important in explaining grass cover, collectively soil water accounted for 40 to 60% of the total explained variance. Soil water conditions were more useful for understanding the responses of C3 than C4 grass species. Projections of water balance variables under climate change indicate that conditions that currently support perennial grasses will be less common in the future, and these altered conditions will be more pronounced in the Chihuahuan Desert and Colorado Plateau. We conclude that incorporating multiple aspects of climate and accounting for soil variability can improve our ability to understand patterns, identify areas of vulnerability, and predict the future of desert grasslands.

Desert grassland responses to climate and soil moisture suggest divergent vulnerabilities across the southwestern United States.

PubMed

Gremer, Jennifer R; Bradford, John B; Munson, Seth M; Duniway, Michael C

2015-11-01

Climate change predictions include warming and drying trends, which are expected to be particularly pronounced in the southwestern United States. In this region, grassland dynamics are tightly linked to available moisture, yet it has proven difficult to resolve what aspects of climate drive vegetation change. In part, this is because it is unclear how heterogeneity in soils affects plant responses to climate. Here, we combine climate and soil properties with a mechanistic soil water model to explain temporal fluctuations in perennial grass cover, quantify where and the degree to which incorporating soil water dynamics enhances our ability to understand temporal patterns, and explore the potential consequences of climate change by assessing future trajectories of important climate and soil water variables. Our analyses focused on long-term (20-56 years) perennial grass dynamics across the Colorado Plateau, Sonoran, and Chihuahuan Desert regions. Our results suggest that climate variability has negative effects on grass cover, and that precipitation subsidies that extend growing seasons are beneficial. Soil water metrics, including the number of dry days and availability of water from deeper (>30 cm) soil layers, explained additional grass cover variability. While individual climate variables were ranked as more important in explaining grass cover, collectively soil water accounted for 40-60% of the total explained variance. Soil water conditions were more useful for understanding the responses of C3 than C4 grass species. Projections of water balance variables under climate change indicate that conditions that currently support perennial grasses will be less common in the future, and these altered conditions will be more pronounced in the Chihuahuan Desert and Colorado Plateau. We conclude that incorporating multiple aspects of climate and accounting for soil variability can improve our ability to understand patterns, identify areas of vulnerability, and predict the future of desert grasslands. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Grass-legume mixtures sustain strong yield advantage over monocultures under cool maritime growing conditions over a period of 5 years.

PubMed

Helgadóttir, Áslaug; Suter, Matthias; Gylfadóttir, Thórey Ó; Kristjánsdóttir, Thórdís A; Lüscher, Andreas

2018-05-22

Grassland-based livestock systems in cool maritime regions are commonly dominated by grass monocultures receiving relatively high levels of fertilizer. The current study investigated whether grass-legume mixtures can improve the productivity, resource efficiency and robustness of yield persistence of cultivated grassland under extreme growing conditions over a period of 5 years. Monocultures and mixtures of two grasses (Phleum pratense and Festuca pratensis) and two legumes (Trifolium pratense and Trifolium repens), one of which was fast establishing and the other temporally persistent, were sown in a field trial. Relative abundance of the four species in the mixtures was systematically varied at sowing. The plots were maintained under three N levels (20, 70 and 220 kg N ha-1 year-1) and harvested twice a year for five consecutive years. Yields of individual species and interactions between all species present were modelled to estimate the species diversity effects. Significant positive diversity effects in all individual years and averaged across the 5 years were observed. Across years, the four-species equi-proportional mixture was 71 % (N20: 20 kg N ha-1 year-1) and 51 % (N70: 70 kg N ha-1 year-1) more productive than the average of monocultures, and the highest yielding mixture was 36 % (N20) and 39 % (N70) more productive than the highest yielding monoculture. Importantly, diversity effects were also evident at low relative abundances of either species group, grasses or legumes in the mixture. Mixtures suppressed weeds significantly better than monocultures consistently during the course of the experiment at all N levels. The results show that even in the less productive agricultural systems in the cool maritime regions grass-legume mixtures can contribute substantially and persistently to a more sustainable agriculture. Positive grass-legume interactions suggest that symbiotic N2 fixation is maintained even under these marginal conditions, provided that adapted species and cultivars are used.

76 FR 33337 - Endangered Species Recovery Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-08

... No. TE-036090 Applicant: Virginia S. Moran, Grass Valley, California. The applicant requests a permit... sunburst), Orcutttia pilosa (hairy Orcutt grass), Orcuttia viscida (Sacramento Orcutt grass), Tuctoria greenei (Green's awnless Orcutt grass), Tuctoria mucronata (Mucronata Orcutt grass), and Sidalcea keckii...

40 CFR 180.547 - Prohexadione calcium; tolerances for residues.

Code of Federal Regulations, 2010 CFR

2010-07-01

... byproducts, except kidney 0.05 Grass, forage 1 0.10 Grass, hay 1 0.10 Grass, seed screenings 1 3.5 Grass... kidney 0.05 1Registration is limited to grass grown for seed. (b) Section 18 emergency exemptions...

40 CFR 180.547 - Prohexadione calcium; tolerances for residues.

Code of Federal Regulations, 2011 CFR

2011-07-01

... byproducts, except kidney 0.05 Grass, forage 1 0.10 Grass, hay 1 0.10 Grass, seed screenings 1 3.5 Grass... kidney 0.05 1Registration is limited to grass grown for seed. (b) Section 18 emergency exemptions...

75 FR 69666 - Granting of Request for Early Termination of the Waiting Period Under the Premerger Notification...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-15

....P. G Technicolor S.A. G Thomson 000. G Grass Valley Spain SA. G Brazil GV Newco. G Thomson Licensing SAS. G Grass Valley Germany GmbH. G Grass Valley Australia PTY Limited. G Grass Valley Singapore PTE Ltd. G Canopus Asia Co. Limited. G Grass Valley Canada, Inc. G US GV Newco (to be formed). G Grass...

Population structure in the model grass Brachypodium distachyon is highly correlated with flowering differences across broad geographic areas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tyler, Ludmila; Lee, Scott J.; Young, Nelson D.

The small, annual grass Brachypodium distachyon (L.) Beauv., a close relative of wheat ( Triticum aestivum L.) and barley ( Hordeum vulgare L.), is a powerful model system for cereals and bioenergy grasses. Genome-wide association studies (GWAS) of natural variation can elucidate the genetic basis of complex traits but have been so far limited in B. distachyon by the lack of large numbers of well-characterized and sufficiently diverse accessions. Here, we report on genotyping-by-sequencing (GBS) of 84 B. distachyon, seven B. hybridum, and three B. stacei accessions with diverse geographic origins including Albania, Armenia, Georgia, Italy, Spain, and Turkey. Overmore » 90,000 high-quality single-nucleotide polymorphisms (SNPs) distributed across the Bd21 reference genome were identified. Our results confirm the hybrid nature of the B. hybridum genome, which appears as a mosaic of B. distachyon-like and B. stacei-like sequences. Analysis of more than 50,000 SNPs for the B. distachyon accessions revealed three distinct, genetically defined populations. Surprisingly, these genomic profiles are associated with differences in flowering time rather than with broad geographic origin. High levels of differentiation in loci associated with floral development support the differences in flowering phenology between B. distachyon populations. Genome-wide association studies combining genotypic and phenotypic data also suggest the presence of one or more photoperiodism, circadian clock, and vernalization genes in loci associated with flowering time variation within B. distachyon populations. As a result, our characterization elucidates genes underlying population differences, expands the germplasm resources available for Brachypodium, and illustrates the feasibility and limitations of GWAS in this model grass.« less

Population structure in the model grass Brachypodium distachyon is highly correlated with flowering differences across broad geographic areas

DOE PAGES

Tyler, Ludmila; Lee, Scott J.; Young, Nelson D.; ...

2016-04-29

The small, annual grass Brachypodium distachyon (L.) Beauv., a close relative of wheat ( Triticum aestivum L.) and barley ( Hordeum vulgare L.), is a powerful model system for cereals and bioenergy grasses. Genome-wide association studies (GWAS) of natural variation can elucidate the genetic basis of complex traits but have been so far limited in B. distachyon by the lack of large numbers of well-characterized and sufficiently diverse accessions. Here, we report on genotyping-by-sequencing (GBS) of 84 B. distachyon, seven B. hybridum, and three B. stacei accessions with diverse geographic origins including Albania, Armenia, Georgia, Italy, Spain, and Turkey. Overmore » 90,000 high-quality single-nucleotide polymorphisms (SNPs) distributed across the Bd21 reference genome were identified. Our results confirm the hybrid nature of the B. hybridum genome, which appears as a mosaic of B. distachyon-like and B. stacei-like sequences. Analysis of more than 50,000 SNPs for the B. distachyon accessions revealed three distinct, genetically defined populations. Surprisingly, these genomic profiles are associated with differences in flowering time rather than with broad geographic origin. High levels of differentiation in loci associated with floral development support the differences in flowering phenology between B. distachyon populations. Genome-wide association studies combining genotypic and phenotypic data also suggest the presence of one or more photoperiodism, circadian clock, and vernalization genes in loci associated with flowering time variation within B. distachyon populations. As a result, our characterization elucidates genes underlying population differences, expands the germplasm resources available for Brachypodium, and illustrates the feasibility and limitations of GWAS in this model grass.« less

Pushing the boundaries of resistance: insights from Brachypodium-rust interactions

PubMed Central

Figueroa, Melania; Castell-Miller, Claudia V.; Li, Feng; Hulbert, Scot H.; Bradeen, James M.

2015-01-01

The implications of global population growth urge transformation of current food and bioenergy production systems to sustainability. Members of the family Poaceae are of particular importance both in food security and for their applications as biofuel substrates. For centuries, rust fungi have threatened the production of valuable crops such as wheat, barley, oat, and other small grains; similarly, biofuel crops can also be susceptible to these pathogens. Emerging rust pathogenic races with increased virulence and recurrent rust epidemics around the world point out the vulnerability of monocultures. Basic research in plant immunity, especially in model plants, can make contributions to understanding plant resistance mechanisms and improve disease management strategies. The development of the grass Brachypodium distachyon as a genetically tractable model for monocots, especially temperate cereals and grasses, offers the possibility to overcome the experimental challenges presented by the genetic and genomic complexities of economically valuable crop plants. The numerous resources and tools available in Brachypodium have opened new doors to investigate the underlying molecular and genetic bases of plant–microbe interactions in grasses and evidence demonstrating the applicability and advantages of working with B. distachyon is increasing. Importantly, several interactions between B. distachyon and devastating plant pathogens, such rust fungi, have been examined in the context of non-host resistance. Here, we discuss the use of B. distachyon in these various pathosystems. Exploiting B. distachyon to understand the mechanisms underpinning disease resistance to non-adapted rust fungi may provide effective and durable approaches to fend off these pathogens. The close phylogenetic relationship among Brachypodium spp. and grasses with industrial and agronomic value support harnessing this model plant to improve cropping systems and encourage its use in translational research. PMID:26284085

Effect of vegetated filter strips on transport and deposition rates of Escherichia coli in overland flow in the eastern escarpments of the Mau Forest, Njoro River Watershed, Kenya

PubMed Central

Onyando, J. O.; Moturi, W. N.; Muia, A. W.; Ombui, P.; Shivoga, W. A.; Roegner, A. F.

2016-01-01

The fate and transport of Escherichia coli (E. coli) in lotic waters through vegetated filter strips (VFSs) was evaluated in a field model pasture, utilizing VFSMOD Windows along with direct pathogen testing. This study assessed effects of VFS on transport and deposition rates of E. coli in lotic overland flow waters. The VFS measured 44 m long by 40 m wide, covering an area of 1584 m2 and land slope of 15 %. Cowpat was applied onto the model pasture and washed by overland flow into the VFS. The 4-methylumbelliferyl β-D-glucuronide substrate confirmed the identity of E. coli prior to cowpat application and after isolating them from soil using centrifugation and membrane filtration techniques. Napier grass root system recorded the highest recovery rates of E. coli at 99.9 % along the length of VFS III. This efficiency reduced significantly (p < 0.05; df = 29) to 95 % in Kikuyu grass and 75 % in Couch grass–Buffer grass. The data demonstrated similarity in transport of manure-borne E. coli and organic carbon (OC) through all the simulated VFS. These results indicated that OC could be used as a true natural tracer of manure-borne E. coli, a pollution indicator organism of lentic and lotic surface waters provided the OC release kinetics from cowpat were similar to that of E. coli kinetics. Thus, efficient filtering to reduce E. coli concentrations and load in overland flows requires managing combined grass species, agro-pastoral systems models and dispersed or preferential flows to enhance surface water quality standards. PMID:28393102

Environmental Assessment for Military Family Housing Privatization Initiative

DTIC Science & Technology

2006-01-01

grass Bouteloua radicosa Grama grass Bouteloua parryi Grama grass Bouteloua barbata Grama grass Cathestecum erectum False grama grass Aristida...Leptonycteris curasoae yerbabuenae Lesser long- nosed bat LE WSC Desert scrub habitat with agave and columnar cacti present as food plants. May Occur

AmeriFlux CA-Let Alberta - Mixed Grass Prairie

DOE Office of Scientific and Technical Information (OSTI.GOV)

Flanagan, Lawrence B.

This is the AmeriFlux version of the carbon flux data for the site CA-Let Alberta - Mixed Grass Prairie. Site Description - Latitude 49.43° N; Longitude 112.56° W, altitude 951 meters,Mixed Grass Prairie that includes the following major species: Agropyron spp. (Wheat Grasses), Tragopogon dubius (Goat’s Beard), Vicia americana (Wild Vetch), Koleria cristata (June Grass), Eurotia lanata (Winter Fat), Stipa comata (Spear Grass), Achillea millefolium (Yarrow); Artemisia frigida (Pasture Sage); Carex spp. (Sedges), Bouteloua gracilis (Blue Grama Grass). Maximum canopy height varies from year to year

Responses of tropical native and invader C4 grasses to water stress, clipping and increased atmospheric CO2 concentration.

PubMed

Baruch, Zdravko; Jackson, Robert B

2005-10-01

The invasion of African grasses into Neotropical savannas has altered savanna composition, structure and function. The projected increase in atmospheric CO(2) concentration has the potential to further alter the competitive relationship between native and invader grasses. The objective of this study was to quantify the responses of two populations of a widespread native C(4) grass (Trachypogon plumosus) and two African C(4) grass invaders (Hyparrhenia rufa and Melinis minutiflora) to high CO(2) concentration interacting with two primary savanna stressors: drought and herbivory. Elevated CO(2) increased the competitive potential of invader grasses in several ways. Germination and seedling size was promoted in introduced grasses. Under high CO(2), the relative growth rate of young introduced grasses was twice that of native grass (0.58 g g(-1) week(-1) vs 0.25 g g(-1) week(-1)). This initial growth advantage was maintained throughout the course of the study. Well-watered and unstressed African grasses also responded more to high CO(2) than did the native grass (biomass increases of 21-47% compared with decreases of 13-51%). Observed higher water and nitrogen use efficiency of invader grasses may aid their establishment and competitive strength in unfertile sites, specially if the climate becomes drier. In addition, high CO(2) promoted lower leaf N content more in the invader grasses. The more intensive land use, predicted to occur in this region, may interact with high CO(2) to favor the African grasses, as they generally recovered faster after simulated herbivory. The superiority of invader grasses under high CO(2) suggests further increases in their competitive strength and a potential increased rate of displacement of the native savannas in the future by grasslands dominated by introduced African species.

Plant Nitrogen Dynamics and Nitrogen-use Strategies under Altered Nitrogen Seasonality and Competition

PubMed Central

Yuan, Zhiyou; Liu, Weixing; Niu, Shuli; Wan, Shiqiang

2007-01-01

Background and Aims Numerous studies have examined the effects of climatic factors on the distribution of C3 and C4 grasses in various regions throughout the world, but the role of seasonal fluctuations in temperature, precipitation and soil N availability in regulating growth and competition of these two functional types is still not well understood. This report is about the effects of seasonality of soil N availability and competition on plant N dynamics and N-use strategies of one C3 (Leymus chinensis) and one C4 (Chloris virgata) grass species. Methods Leymus chinensis and C. virgata, two grass species native to the temperate steppe in northern China, were planted in a monoculture and a mixture under three different N seasonal availabilities: an average model (AM) with N evenly distributed over the growing season; a one-peak model (OM) with more N in summer than in spring and autumn; and a two-peak model (TM) with more N in spring and autumn than in summer. Key Results The results showed that the altered N seasonality changed plant N concentration, with the highest value of L. chinensis under the OM treatment and C. virgata under the TM treatment, respectively. N seasonality also affected plant N content, N productivity and N-resorption efficiency and proficiency in both the C3 and C4 species. Interspecific competition influenced N-use and resorption efficiency in both the C3 and C4 species, with higher N-use and resorption efficiency in the mixture than in monoculture. The C4 grass had higher N-use efficiency than the C3 grass due to its higher N productivity, irrespective of the N treatment or competition. Conclusions The observations suggest that N-use strategies in the C3 and C4 species used in the study were closely related to seasonal dynamics of N supply and competition. N seasonality might be involved in the growth and temporal niche separation between C3 and C4 species observed in the natural ecosystems. PMID:17704500

A Tensile Strength of Bermuda Grass and Vetiver Grass in Terms of Root Reinforcement Ability Toward Soil Slope Stabilization

NASA Astrophysics Data System (ADS)

Noorasyikin, M. N.; Zainab, M.

2016-07-01

An examination on root characteristics and root properties has been implemented in this study. Two types of bioengineering were chose which are Vetiver grass and Bermuda grass as these grasses were widely applied for slope stabilization. The root samples were taken to the laboratory to investigate its classification, characteristics and strength. The root of both grasses was found grow with fibrous root matrix system. In terms of root anchorage, the root matrix system of Vetiver grass was exhibits more strengthen than the Bermuda grass. However, observation on root image from Scanning Electron Microscope test reveals that the root of Vetiver grass becomes non-porous as the moisture content reduced. Meanwhile, the root tensile strength of Bermuda grass was obtained acquired low value with higher percentage of moisture content, root morphology and bonding strength. The results indicated that the root tensile strength is mainly influence by percentage of moisture content and root morphology.

Leaf Area Index Drives Soil Water Availability and Extreme Drought-Related Mortality under Elevated CO2 in a Temperate Grassland Model System

PubMed Central

Manea, Anthony; Leishman, Michelle R.

2014-01-01

The magnitude and frequency of climatic extremes, such as drought, are predicted to increase under future climate change conditions. However, little is known about how other factors such as CO2 concentration will modify plant community responses to these extreme climatic events, even though such modifications are highly likely. We asked whether the response of grasslands to repeat extreme drought events is modified by elevated CO2, and if so, what are the underlying mechanisms? We grew grassland mesocosms consisting of 10 co-occurring grass species common to the Cumberland Plain Woodland of western Sydney under ambient and elevated CO2 and subjected them to repeated extreme drought treatments. The 10 species included a mix of C3, C4, native and exotic species. We hypothesized that a reduction in the stomatal conductance of the grasses under elevated CO2 would be offset by increases in the leaf area index thus the retention of soil water and the consequent vulnerability of the grasses to extreme drought would not differ between the CO2 treatments. Our results did not support this hypothesis: soil water content was significantly lower in the mesocosms grown under elevated CO2 and extreme drought-related mortality of the grasses was greater. The C4 and native grasses had significantly higher leaf area index under elevated CO2 levels. This offset the reduction in the stomatal conductance of the exotic grasses as well as increased rainfall interception, resulting in reduced soil water content in the elevated CO2 mesocosms. Our results suggest that projected increases in net primary productivity globally of grasslands in a high CO2 world may be limited by reduced soil water availability in the future. PMID:24632832

Leaf area index drives soil water availability and extreme drought-related mortality under elevated CO2 in a temperate grassland model system.

PubMed

Manea, Anthony; Leishman, Michelle R

2014-01-01

The magnitude and frequency of climatic extremes, such as drought, are predicted to increase under future climate change conditions. However, little is known about how other factors such as CO2 concentration will modify plant community responses to these extreme climatic events, even though such modifications are highly likely. We asked whether the response of grasslands to repeat extreme drought events is modified by elevated CO2, and if so, what are the underlying mechanisms? We grew grassland mesocosms consisting of 10 co-occurring grass species common to the Cumberland Plain Woodland of western Sydney under ambient and elevated CO2 and subjected them to repeated extreme drought treatments. The 10 species included a mix of C3, C4, native and exotic species. We hypothesized that a reduction in the stomatal conductance of the grasses under elevated CO2 would be offset by increases in the leaf area index thus the retention of soil water and the consequent vulnerability of the grasses to extreme drought would not differ between the CO2 treatments. Our results did not support this hypothesis: soil water content was significantly lower in the mesocosms grown under elevated CO2 and extreme drought-related mortality of the grasses was greater. The C4 and native grasses had significantly higher leaf area index under elevated CO2 levels. This offset the reduction in the stomatal conductance of the exotic grasses as well as increased rainfall interception, resulting in reduced soil water content in the elevated CO2 mesocosms. Our results suggest that projected increases in net primary productivity globally of grasslands in a high CO2 world may be limited by reduced soil water availability in the future.

Silymarin inhibits adipogenesis in the adipocytes in grass carp Ctenopharyngodon idellus in vitro and in vivo.

PubMed

Xiao, Peizhen; Yang, Zhou; Sun, Jian; Tian, Jingjing; Chang, Zhiguang; Li, Xuexian; Zhang, Baotong; Ye, Yuantu; Ji, Hong; Yu, Ermeng; Xie, Jun

2017-12-01

In this study, two experiments were performed to explore the function of silymarin in adipogenesis in grass carp (Ctenopharyngodon idellus) using in vitro and in vivo models. In experiment 1, differentiated grass carp pre-adipocytes were treated with silymarin for 6 days. Treatment with 100 μg mL -1 silymarin (SM100 group) significantly reduced triglyceride accumulation at day 6. The adipogenic gene expression levels of PPARγ, C/EBPα, SREBP1c, FAS, SCD1, and LPL, and the protein expression level of PPARγ were significantly down-regulated in the SM100 group. Additionally, the SM100 group had significantly lower reactive oxygen species production and reduced glutathione contents compared with the control in vitro. In experiment 2, the juvenile grass carp (mean body weight= 27.4 ± 0.17 g) were fed six isonitrogenous and isocaloric diets in a factorial design containing 0, 100, or 200 mg kg -1 silymarin (SM0, SM100, SM200) associated with either 4 or 8% lipid levels (low lipid, LL, and high lipid, HL, respectively) for 82 days. The results demonstrated that dietary silymarin supplementation significantly reduced the elevated intraperitoneal fat index in grass carp fed with high-lipid diets, and the gene expression of adipogenesis (PPARγ, FAS) when supplemented with dietary silymarin was notably lower than when no silymarin was supplemented under the high-lipid diets. Thus, our data suggest that silymarin suppressed lipid accumulation in grass carp both in vitro and in vivo, and the effect might be due to an influence on the expression of adipogenesis factors and ROS production partly associated with effects on antioxidant capability.

40 CFR 180.34 - Tests on the amount of residue remaining.

Code of Federal Regulations, 2011 CFR

2011-07-01

..., barley, oats, rice, rye (each in grain form). (25) Alfalfa, Bermuda grass, bluegrass, brome grass, clovers, cowpea hay, fescue, lespedeza, lupines, orchard grass, peanut hay, peavine hay, rye grass, soybean hay, sudan grass, timothy, and vetch. (26) Corn forage, sorghum forage. (27) Sugarcane, cane...

40 CFR 180.34 - Tests on the amount of residue remaining.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., barley, oats, rice, rye (each in grain form). (25) Alfalfa, Bermuda grass, bluegrass, brome grass, clovers, cowpea hay, fescue, lespedeza, lupines, orchard grass, peanut hay, peavine hay, rye grass, soybean hay, sudan grass, timothy, and vetch. (26) Corn forage, sorghum forage. (27) Sugarcane, cane...

Green technologies in natural and synthetic surfaces use for dumps reclamation

NASA Astrophysics Data System (ADS)

Klimkina, Iryna; Fedotov, Viacheslav; Heilmeier, Hermann

2016-04-01

Last 50 years coal dumps reclamation in Ukraine was based on two- or three-layer models. These models use a fertile substratum underneath a black soil (chernozem) layer 0.5 m thick (Model 1) or 0.70-1 m thick (Model 2). Model 3 has 3 layers. The deepest layer is a substrate which is phytotoxic or unfavourable for crop growth (coal-bearing substrates with a high content of pyrite, saline substrates). The second layers acts as a protective shield and consist of loess (0.5 m). The third is the layer of fertile chernozem (0.3-0.8 m). However, due to the situation of a shortage of fertile soils, a lack of nutrient elements in the waste rock, and a moisture deficit with strong rock acidification, it is considered important to develop new non-traditional reclamation methods based on the geo-synthetic materials used in conjunction with sowing lawn grasses or grass seeds inside. The geogrids and biogeotextiles made from natural materials such as hemp, flax, jute, coconut and other plant biopolymer fibers are recommended for bioremediation. The biodegradable carcass of reclamation covering materials stabilises the slopes, effectively restraints the soil particles from leaching and blowing, and prevents wash-out of the plant seeds, as well as protecting them from being eaten by animals. The research object of the presented work was the coal dumps of sulfide rocks in Western Donbass (Ukraine). These rocks are characterized by low level of the maximum hygroscopic moisture (4.3%) and moisture content not available for plant growth (5-6%). Also the rock has an average level of salinity, mainly of the sulphate type. The main goal of the study was to justify the use of some non-traditional materials such as burlap (jute cloth), agricultural fibers (light non-woven material from polypropylene fiber of spun-bond type) and a padding of polyester in the capacity of a geosynthetic substrate as a basis for the mixed grass crop that enable a reduction in the bioremediation costs (in comparison with traditional methods of covering by fertile soil layer) and the arrangement of lawn roll. A mixture of grass crops was used that included three types of grass seeds which were sown in the condition of hydroponics with settled tap water in a floating poly-foam frame on the one- and two-layer (with grass seeds inside) substrates of the above-mentioned materials. The best results, in terms of seed germination, root and above-ground parts of the plants length, were obtained with a single layer of jute burlap on which practically all germinated seeds reached a high degree of seedlings mass and root productivity similar to indices of growth mixtures in greenhouses. As a mulch of organic ingredients a wide range of crop residues, namely wheat straw, corn stalks, sunflower stalks and husks, and others, can be used.

Application of Tissue Culture and Transformation Techniques in Model Species Brachypodium distachyon.

PubMed

Sogutmaz Ozdemir, Bahar; Budak, Hikmet

2018-01-01

Brachypodium distachyon has recently emerged as a model plant species for the grass family (Poaceae) that includes major cereal crops and forage grasses. One of the important traits of a model species is its capacity to be transformed and ease of growing both in tissue culture and in greenhouse conditions. Hence, plant transformation technology is crucial for improvements in agricultural studies, both for the study of new genes and in the production of new transgenic plant species. In this chapter, we review an efficient tissue culture and two different transformation systems for Brachypodium using most commonly preferred gene transfer techniques in plant species, microprojectile bombardment method (biolistics) and Agrobacterium-mediated transformation.In plant transformation studies, frequently used explant materials are immature embryos due to their higher transformation efficiencies and regeneration capacity. However, mature embryos are available throughout the year in contrast to immature embryos. We explain a tissue culture protocol for Brachypodium using mature embryos with the selected inbred lines from our collection. Embryogenic calluses obtained from mature embryos are used to transform Brachypodium with both plant transformation techniques that are revised according to previously studied protocols applied in the grasses, such as applying vacuum infiltration, different wounding effects, modification in inoculation and cocultivation steps or optimization of bombardment parameters.

Laboratory investigation of the acoustic response of seagrass tissue in the frequency band 0.5-2.5 kHz.

PubMed

Wilson, Preston S; Dunton, Kenneth H

2009-04-01

Previous in situ investigations of seagrass have revealed acoustic phenomena that depend on plant density, tissue gas content, and free bubbles produced by photosynthetic activity, but corresponding predictive models that could be used to optimize acoustic remote sensing, shallow water sonar, and mine hunting applications have not appeared. To begin to address this deficiency, low frequency (0.5-2.5 kHz) acoustic laboratory experiments were conducted on three freshly collected Texas Gulf Coast seagrass species. A one-dimensional acoustic resonator technique was used to assess the biomass and effective acoustic properties of the leaves and rhizomes of Thalassia testudinum (turtle grass), Syringodium filiforme (manatee grass), and Halodule wrightii (shoal grass). Independent biomass and gas content estimates were obtained via microscopic cross-section imagery. The acoustic results were compared to model predictions based on Wood's equation for a two-phase medium. The effective sound speed in the plant-filled resonator was strongly dependent on plant biomass, but the Wood's equation model (based on tissue gas content alone) could not predict the effective sound speed for the low irradiance conditions of the experiment, in which no free bubbles were generated by photosynthesis. The results corroborate previously published results obtained in situ for another seagrass species, Posidonia oceanica.

Setaria viridis: A Model for C4 Photosynthesis[C][W

PubMed Central

Brutnell, Thomas P.; Wang, Lin; Swartwood, Kerry; Goldschmidt, Alexander; Jackson, David; Zhu, Xin-Guang; Kellogg, Elizabeth; Van Eck, Joyce

2010-01-01

C4 photosynthesis drives productivity in several major food crops and bioenergy grasses, including maize (Zea mays), sugarcane (Saccharum officinarum), sorghum (Sorghum bicolor), Miscanthus x giganteus, and switchgrass (Panicum virgatum). Gains in productivity associated with C4 photosynthesis include improved water and nitrogen use efficiencies. Thus, engineering C4 traits into C3 crops is an attractive target for crop improvement. However, the lack of a small, rapid cycling genetic model system to study C4 photosynthesis has limited progress in dissecting the regulatory networks underlying the C4 syndrome. Setaria viridis is a member of the Panicoideae clade and is a close relative of several major feed, fuel, and bioenergy grasses. It is a true diploid with a relatively small genome of ~510 Mb. Its short stature, simple growth requirements, and rapid life cycle will greatly facilitate genetic studies of the C4 grasses. Importantly, S. viridis uses an NADP-malic enzyme subtype C4 photosynthetic system to fix carbon and therefore is a potentially powerful model system for dissecting C4 photosynthesis. Here, we summarize some of the recent advances that promise greatly to accelerate the use of S. viridis as a genetic system. These include our recent successful efforts at regenerating plants from seed callus, establishing a transient transformation system, and developing stable transformation. PMID:20693355

Impact of two centuries of intensive agriculture on soil carbon, nitrogen and phosphorus cycling in the UK.

PubMed

Muhammed, Shibu E; Coleman, Kevin; Wu, Lianhai; Bell, Victoria A; Davies, Jessica A C; Quinton, John N; Carnell, Edward J; Tomlinson, Samuel J; Dore, Anthony J; Dragosits, Ulrike; Naden, Pamela S; Glendining, Margaret J; Tipping, Edward; Whitmore, Andrew P

2018-09-01

This paper describes an agricultural model (Roth-CNP) that estimates carbon (C), nitrogen (N) and phosphorus (P) pools, pool changes, their balance and the nutrient fluxes exported from arable and grassland systems in the UK during 1800-2010. The Roth-CNP model was developed as part of an Integrated Model (IM) to simulate C, N and P cycling for the whole of UK, by loosely coupling terrestrial, hydrological and hydro-chemical models. The model was calibrated and tested using long term experiment (LTE) data from Broadbalk (1843) and Park Grass (1856) at Rothamsted. We estimated C, N and P balance and their fluxes exported from arable and grassland systems on a 5km×5km grid across the whole of UK by using the area of arable of crops and livestock numbers in each grid and their management. The model estimated crop and grass yields, soil organic carbon (SOC) stocks and nutrient fluxes in the form of NH 4 -N, NO 3 -N and PO 4 -P. The simulated crop yields were compared to that reported by national agricultural statistics for the historical to the current period. Overall, arable land in the UK have lost SOC by -0.18, -0.25 and -0.08MgCha -1 y -1 whereas land under improved grassland SOC stock has increased by 0.20, 0.47 and 0.24MgCha -1 y -1 during 1800-1950, 1950-1970 and 1970-2010 simulated in this study. Simulated N loss (by leaching, runoff, soil erosion and denitrification) increased both under arable (-15, -18 and -53kgNha -1 y -1 ) and grass (-18, -22 and -36kgNha -1 y -1 ) during different time periods. Simulated P surplus increased from 2.6, 10.8 and 18.1kgPha -1 y -1 under arable and 2.8, 11.3 and 3.6kgPha -1 y -1 under grass lands 1800-1950, 1950-1970 and 1970-2010. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

Construction of high quality Gateway™ entry libraries and their application to yeast two-hybrid for the monocot model plant Brachypodium distachyon.

PubMed

Cao, Shuanghe; Siriwardana, Chamindika L; Kumimoto, Roderick W; Holt, Ben F

2011-05-19

Monocots, especially the temperate grasses, represent some of the most agriculturally important crops for both current food needs and future biofuel development. Because most of the agriculturally important grass species are difficult to study (e.g., they often have large, repetitive genomes and can be difficult to grow in laboratory settings), developing genetically tractable model systems is essential. Brachypodium distachyon (hereafter Brachypodium) is an emerging model system for the temperate grasses. To fully realize the potential of this model system, publicly accessible discovery tools are essential. High quality cDNA libraries that can be readily adapted for multiple downstream purposes are a needed resource. Additionally, yeast two-hybrid (Y2H) libraries are an important discovery tool for protein-protein interactions and are not currently available for Brachypodium. We describe the creation of two high quality, publicly available Gateway™ cDNA entry libraries and their derived Y2H libraries for Brachypodium. The first entry library represents cloned cDNA populations from both short day (SD, 8/16-h light/dark) and long day (LD, 20/4-h light/dark) grown plants, while the second library was generated from hormone treated tissues. Both libraries have extensive genome coverage (~5 × 107 primary clones each) and average clone lengths of ~1.5 Kb. These entry libraries were then used to create two recombination-derived Y2H libraries. Initial proof-of-concept screens demonstrated that a protein with known interaction partners could readily re-isolate those partners, as well as novel interactors. Accessible community resources are a hallmark of successful biological model systems. Brachypodium has the potential to be a broadly useful model system for the grasses, but still requires many of these resources. The Gateway™ compatible entry libraries created here will facilitate studies for multiple user-defined purposes and the derived Y2H libraries can be immediately applied to large scale screening and discovery of novel protein-protein interactions. All libraries are freely available for distribution to the research community.

Final Environmental Assessment For Wing Infrastructure Development Outlook (WINDO) Davis-Monthan Air Force Base, Tucson, Arizona

DTIC Science & Technology

2005-06-01

rothrockii Grama grass Bouteloua californica Grama grass Bouteloua radicosa Grama grass Bouteloua parryi Grama grass Bouteloua barbata Grama grass...with agave and columnar cacti present as food plants. May Occur Mammal Myotis velifer Cave myotis SC Desertscrub of creosote, brittlebush

50 CFR 21.52 - Public health control order for resident Canada geese.

Code of Federal Regulations, 2011 CFR

2011-10-01

... repellants, (G) Cervical dislocation, and (H) CO2 asphyxiation. (ii) Birds caught live may be euthanized or... lomatium, Contra Costa goldfields, Hoover's spurge, fleshy owl's clover, Colusa grass, hairy Orcutt grass, Solano grass, Greene's tuctoria, Sacramento Valley Orcutt grass, San Joaquin Valley Orcutt grass, slender...

75 FR 35801 - Notice of Receipt of Several Pesticide Petitions Filed for Residues of Pesticide Chemicals in or...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-23

....05 ppm; grass, hay at 0.05 ppm; and grass, forage at 1.5 ppm. An enforcement method for plants has...; sorghum, stover at 0.35 ppm; grass, hay at 2.5 ppm; and grass, forage at 10 ppm. The analytical method is... on sorghum, grain at 0.2 ppm; grass, hay at 5.0 ppm; and grass, forage at 18 ppm. Since bromoxynil...

Reversing land degradation through grasses: a systematic meta-analysis in the Indian tropics

NASA Astrophysics Data System (ADS)

Mandal, Debashis; Srivastava, Pankaj; Giri, Nishita; Kaushal, Rajesh; Cerda, Artemi; Meherul Alam, Nurnabi

2017-02-01

Although intensive agriculture is necessary to sustain the world's growing population, accelerated soil erosion contributes to a decrease in the environmental health of ecosystems at local, regional and global scales. Reversing the process of land degradation using vegetative measures is of utmost importance in such ecosystems. The present study critically analyzes the effect of grasses in reversing the process of land degradation using a systematic review. The collected information was segregated under three different land use and land management situations. Meta-analysis was applied to test the hypothesis that the use of grasses reduces runoff and soil erosion. The effect of grasses was deduced for grass strip and in combination with physical structures. Similarly, the effects of grasses were analyzed in degraded pasture lands. The overall result of the meta-analysis showed that infiltration capacity increased approximately 2-fold after planting grasses across the slopes in agricultural fields. Grazing land management through a cut-and-carry system increased conservation efficiencies by 42 and 63 % with respect to reduction in runoff and erosion, respectively. Considering the comprehensive performance index (CPI), it has been observed that hybrid Napier (Pennisetum purpureum) and sambuta (Saccharum munja) grass seem to posses the most desirable attributes as an effective grass barrier for the western Himalayas and Eastern Ghats, while natural grass (Dichanthium annulatum) and broom grass (Thysanolaena maxima) are found to be most promising grass species for the Konkan region of the Western Ghats and the northeastern Himalayan region, respectively. In addition to these benefits, it was also observed that soil carbon loss can be reduced by 83 % with the use of grasses. Overall, efficacy for erosion control of various grasses was more than 60 %; hence, their selection should be based on the production potential of these grasses under given edaphic and agro-ecological conditions. The present analysis also indicated that grass must be used as a vegetative strip to maintain soil quality in sloppy arable areas (8.5 Mha) of Indian hilly regions. Similarly, due attention should be paid for establishing grasses in 3 Mha of degraded pasture lands and 3.5 Mha of shifting cultivation areas in India to reverse the land degradation.

Treatment with grass allergen peptides improves symptoms of grass pollen-induced allergic rhinoconjunctivitis.

PubMed

Ellis, Anne K; Frankish, Charles W; O'Hehir, Robyn E; Armstrong, Kristen; Steacy, Lisa; Larché, Mark; Hafner, Roderick P

2017-08-01

Synthetic peptide immunoregulatory epitopes are a new class of immunotherapy to treat allergic rhinoconjunctivitis (ARC). Grass allergen peptides, comprising 7 synthetic T-cell epitopes derived from Cyn d 1, Lol p 5, Dac g 5, Hol l 5, and Phl p 5, is investigated for treatment of grass pollen-induced ARC. We sought to evaluate the efficacy, safety, and tolerability of intradermally administered grass allergen peptides. A multicenter, randomized, double-blind, placebo-controlled study evaluated 3 regimens of grass allergen peptides versus placebo in patients with grass pollen-induced allergy (18-65 years). After a 4-day baseline challenge to rye grass in the environmental exposure unit (EEU), subjects were randomized to receive grass allergen peptides at 6 nmol at 2-week intervals for a total of 8 doses (8x6Q2W), grass allergen peptides at 12 nmol at 4-week intervals for a total of 4 doses (4x12Q4W), or grass allergen peptides at 12 nmol at 2-week intervals for a total of 8 doses (8x12Q2W) or placebo and treated before the grass pollen season. The primary efficacy end point was change from baseline in total rhinoconjunctivitis symptom score across days 2 to 4 of a 4-day posttreatment challenge (PTC) in the EEU after the grass pollen season. Secondary efficacy end points and safety were also assessed. Two hundred eighty-two subjects were randomized. Significantly greater improvement (reduction of total rhinoconjunctivitis symptom score from baseline to PTC) occurred across days 2 to 4 with grass allergen peptide 8x6Q2W versus placebo (-5.4 vs -3.8, respectively; P = .0346). Greater improvement at PTC also occurred for grass allergen peptide 8x6Q2W versus placebo (P = .0403) in patients with more symptomatic ARC. No safety signals were detected. Grass allergen peptide 8x6Q2W significantly improved ARC symptoms after rye grass allergen challenge in an EEU with an acceptable safety profile. Copyright © 2017 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

Development of a modular streamflow model to quantify runoff contributions from different land uses in tropical urban environments using Genetic Programming

NASA Astrophysics Data System (ADS)

Meshgi, Ali; Schmitter, Petra; Chui, Ting Fong May; Babovic, Vladan

2015-06-01

The decrease of pervious areas during urbanization has severely altered the hydrological cycle, diminishing infiltration and therefore sub-surface flows during rainfall events, and further increasing peak discharges in urban drainage infrastructure. Designing appropriate waster sensitive infrastructure that reduces peak discharges requires a better understanding of land use specific contributions towards surface and sub-surface processes. However, to date, such understanding in tropical urban environments is still limited. On the other hand, the rainfall-runoff process in tropical urban systems experiences a high degree of non-linearity and heterogeneity. Therefore, this study used Genetic Programming to establish a physically interpretable modular model consisting of two sub-models: (i) a baseflow module and (ii) a quick flow module to simulate the two hydrograph flow components. The relationship between the input variables in the model (i.e. meteorological data and catchment initial conditions) and its overall structure can be explained in terms of catchment hydrological processes. Therefore, the model is a partial greying of what is often a black-box approach in catchment modelling. The model was further generalized to the sub-catchments of the main catchment, extending the potential for more widespread applications. Subsequently, this study used the modular model to predict both flow components of events as well as time series, and applied optimization techniques to estimate the contributions of various land uses (i.e. impervious, steep grassland, grassland on mild slope, mixed grasses and trees and relatively natural vegetation) towards baseflow and quickflow in tropical urban systems. The sub-catchment containing the highest portion of impervious surfaces (40% of the area) contributed the least towards the baseflow (6.3%) while the sub-catchment covered with 87% of relatively natural vegetation contributed the most (34.9%). The results from the quickflow module revealed average runoff coefficients between 0.12 and 0.80 for the various land uses and decreased from impervious (0.80), grass on steep slopes (0.56), grass on mild slopes (0.48), mixed grasses and trees (0.42) to relatively natural vegetation (0.12). The established modular model, reflecting the driving hydrological processes, enables the quantification of land use specific contributions towards the baseflow and quickflow components. This quantification facilitates the integration of water sensitive urban infrastructure for the sustainable development of water in tropical megacities.

Using vegetation model-to-data comparisons to test the role of abiotic factors in the Neogene and Quaternary origins of modern C4 grasslands

NASA Astrophysics Data System (ADS)

Fox, D. L.; Strömberg, C.; Pau, S.; Taylor, L.; Lehmann, C.; Osborne, C.; Beerling, D. J.; Still, C. J.

2014-12-01

Grasslands dominated by taxa using the C4 photosynthetic pathway evolved on several continents during the Neogene and Quaternary, long after C4 photosynthesis first evolved among grasses. The histories of these ecosystems are relatively well documented in the geological record from stable carbon isotopes (fossil vertebrate herbivores, paleosols) and the plant microfossil record (pollen, phytoliths). The distinct biogeography and ecophysiology of modern C3 and C4 grasses have led to hypotheses explaining the origins of C4 grasslands in terms of long term changes in the Earth system such as increased aridity and decreasing atmospheric pCO2. However, proxies for key parameters of these hypotheses (e.g., temperature, precipitation, pCO2) are still in development, not yet widely applied, or remain contentious, so testing the hypotheses globally remains difficult. To understand better possible links between changes in the Earth system and the origin of C4 grasslands on different continents, we are undertaking a global scale comparison between observational records of C4 grass abundances in Miocene and Pliocene localities compiled from the literature, and three increasingly complex models of C4 dominance and abundance. The literature compilation comprises >2,600 δ13C values of both fossil vertebrates and of paleosol carbonates and >6,700 paleobotanical records. We are using paleoclimate output from the HadCM3L GCM over a range of pCO2 values for each epoch to model C4 dominance or abundance in grid cells as (Model 1) months per year exceeding the temperature at which net assimilation is greater for C4 than C3 photosynthesis (crossover temperature); (Model 2) the number of months per year exceeding the crossover temperature and having sufficient precipitation for growth (≥25 cm/yr; Collatz model); and (Model 3) the Sheffield Dynamic Global Vegetation Model (SDGVM), output from which includes biomass (g C/m2/yr) for distinct structural components (roots, stems, leaves) of multiple plant functional types (C3 and C4 grasses, evergreen and deciduous trees). Statistical comparisons of the isotopic and paleobotanical databases with the paleoclimate and vegetation model outputs allows us to assess the possible role of abiotic factors in the evolution of modern C4 grasslands during the late Neogene.

Relationships of soil, grass, and bedrock over the Kaweah Serpentinite Melange through spectral mixture analysis of AVIRIS data

NASA Technical Reports Server (NTRS)

Mustard, John F.

1993-01-01

A linear mixing model is used to model the spectral variability of an AVIRIS scene from the western foothills of the Sierra Nevada and calibrate these radiance data to reflectance. Five spectral endmembers from the AVIRIS data, plus an ideal 'shade' endmember were required to model the continuum reflectance of each pixel in the image. Three of the endmembers were interpreted to model the surface constituents green vegetation, dry grass, and illumination. Comparison of the fraction images to the bedrock geology maps indicates that substrate composition must be a factor contributing to the spectral properties of these endmembers. Detailed examination of the reflectance spectra of the three soil endmembers reveals that differences in the amount of ferric and ferrous iron and/or organic constituents in the soils is largely responsible for the differences in spectral properties of these endmembers.

MODELING THE DYNAMICS OF THREE FUNCTIONAL GROUPS OF MACROALGAE IN TROPICAL SEAGRASS HABITATS. (R828677C004)

EPA Science Inventory

A model of three functional groups of macroalgae, drift algae, rhizophytic calcareous algae, and seagrass epiphytes, was developed to complement an existing seagrass production model for tropical habitats dominated by Thalassia testudinum (Turtle-grass). The current modeling e...

Drivers of Bird Species Richness within Moist High-Altitude Grasslands in Eastern South Africa

PubMed Central

Smit-Robinson, Hanneline; Underhill, Les G.; Altwegg, Res

2016-01-01

Moist high-altitude grasslands in South Africa are renowned for high avifaunal diversity and are priority areas for conservation. Conservation management of these areas conflicts with management for other uses, such as intensive livestock agriculture, which requires annual burning and leads to heavy grazing. Recently the area has become target for water storage schemes and renewable electricity energy projects. There is therefore an urgent need to investigate environmental factors and habitat factors that affect bird species richness in order to optimise management of those areas set aside for conservation. A particularly good opportunity to study these issues arose at Ingula in the eastern South African high-altitude grasslands. An area that had been subject to intense grazing was bought by the national power utility that constructed a pumped storage scheme on part of the land and set aside the rest for bird conservation. Since the new management took over in 2005 the area has been mostly annually burned with relatively little grazing. The new management seeks scientific advice on how to maintain avian species richness of the study area. We collected bird occurrence and vegetation data along random transects between 2006 and 2010 to monitor the impact of the new management, and to study the effect of the habitat changes on bird species richness. To achieve these, we convert bird transect data to presence only data to investigate how bird species richness were related to key transect vegetation attributes under this new grassland management. First we used generalised linear mixed models, to examine changes in vegetation grass height and cover and between burned and unburned habitats. Secondly, we examined how total bird species richness varied across seasons and years. And finally we investigated which habitat vegetation attributes were correlated with species richness of a group of grassland depended bird species only. Transects that were burned showed a larger decrease in vegetation cover compared to transects that were not burned. Grass height increased over time. Bird species richness was highest in summer compared to other seasons and increased over time. Overall bird species richness increased over the three summer surveys but species richness of birds that prefer heavily grazed habitat showed little change over the three years. Changes in bird species richness were best explained by the model with grass height for combined species richness of grassland depended birds but also for birds that prefer heavy grazing when treated alone. On one hand birds that prefer moderate grazing were best explained by a null model. However, overall bird species richness was better positively correlated to grass height than grass cover or dead grass. We conclude that frequent burning alone with relatively reduced grazing led to higher but less dense grass, which benefited some species and disadvantaged others. We suggest that management of this grassland use combination of fire and grazing and leave some areas unburned to accommodates birds of various habitat needs. PMID:27706186

Drivers of Bird Species Richness within Moist High-Altitude Grasslands in Eastern South Africa.

PubMed

Maphisa, David H; Smit-Robinson, Hanneline; Underhill, Les G; Altwegg, Res

2016-01-01

Moist high-altitude grasslands in South Africa are renowned for high avifaunal diversity and are priority areas for conservation. Conservation management of these areas conflicts with management for other uses, such as intensive livestock agriculture, which requires annual burning and leads to heavy grazing. Recently the area has become target for water storage schemes and renewable electricity energy projects. There is therefore an urgent need to investigate environmental factors and habitat factors that affect bird species richness in order to optimise management of those areas set aside for conservation. A particularly good opportunity to study these issues arose at Ingula in the eastern South African high-altitude grasslands. An area that had been subject to intense grazing was bought by the national power utility that constructed a pumped storage scheme on part of the land and set aside the rest for bird conservation. Since the new management took over in 2005 the area has been mostly annually burned with relatively little grazing. The new management seeks scientific advice on how to maintain avian species richness of the study area. We collected bird occurrence and vegetation data along random transects between 2006 and 2010 to monitor the impact of the new management, and to study the effect of the habitat changes on bird species richness. To achieve these, we convert bird transect data to presence only data to investigate how bird species richness were related to key transect vegetation attributes under this new grassland management. First we used generalised linear mixed models, to examine changes in vegetation grass height and cover and between burned and unburned habitats. Secondly, we examined how total bird species richness varied across seasons and years. And finally we investigated which habitat vegetation attributes were correlated with species richness of a group of grassland depended bird species only. Transects that were burned showed a larger decrease in vegetation cover compared to transects that were not burned. Grass height increased over time. Bird species richness was highest in summer compared to other seasons and increased over time. Overall bird species richness increased over the three summer surveys but species richness of birds that prefer heavily grazed habitat showed little change over the three years. Changes in bird species richness were best explained by the model with grass height for combined species richness of grassland depended birds but also for birds that prefer heavy grazing when treated alone. On one hand birds that prefer moderate grazing were best explained by a null model. However, overall bird species richness was better positively correlated to grass height than grass cover or dead grass. We conclude that frequent burning alone with relatively reduced grazing led to higher but less dense grass, which benefited some species and disadvantaged others. We suggest that management of this grassland use combination of fire and grazing and leave some areas unburned to accommodates birds of various habitat needs.

Stimulation of glycerol kinase in grass carp preadipocytes by EPA.

PubMed

Lei, Caixia; Tian, Jingjing; Ji, Hong

2017-06-01

This study was conducted to assess the effect of eicosapentaenoic acid (EPA) on grass carp preadipocyte glycerol kinase (GyK) expression, as well as to explore the mechanism. Here, we cloned partial sequence of grass carp GyK gene and analyzed its tissue distribution. The result showed that GyK gene expressed most in the liver, followed by adipose tissue and the kidney. Besides, 400 μM oleic acid (18:1n-9, OA) was used to establish a hypertrophic preadipocyte model. GyK gene expression and enzyme activity were significantly enhanced after model cells were treated with 100 μM eicosapentaenoic acid (20:5n-3, EPA) for 6, 12, and 24 h. Meanwhile, peroxisome proliferative-activated receptor (PPAR)γ, adipose triglyceride lipase (ATGL), and the two isoforms of grass carp HSL gene were first identified by Sun et al (2016), and they defined the two isoforms as HSLa and HSLb. Therefore, maybe HSLa and HSLb are appropriate.. The content of triglyceride was dramatically increased by EPA treatment for 24 h. Further, a competitive ATGL antagonist, HY-15859, attenuated the increase in GyK induced by EPA at 12 h. Surprisingly, the enhanced lipolysis and PPARγ gene expression induced by serum deprivation were paralleled by an increase in GyK gene expression, whereas a stabilization in GyK enzyme activity. Other fatty acids, including docosahexaenoic acid, alpha-linolenic acid, linoleic acid, and OA also promoted GyK gene expression. Moreover, an irreversible PPARγ antagonist, GW9662, was used to investigate the role of PPARγ in GyK induction. Data showed that GW9662 abolished the induction of GyK by EPA at 12 h. Together, these data suggested that EPA elevated grass carp preadipocytes GyK expression. ATGL and PPARγ contributed to the induction of GyK. PPARγ may be a key regulator in response to GyK expression induced by EPA.

Sonoran Desert ecosystem transformation by a C4 grass without the grass/fire cycle

USGS Publications Warehouse

Olsson, Aaryn D.; Betancourt, Julio; McClaran, Mitchel P.; Marsh, Stuart E.

2012-01-01

Aim Biological invasions facilitate ecosystem transformation by altering the structure and function, diversity, dominance and disturbance regimes. A classic case is the grass–fire cycle in which grass invasion increases the frequency, scale and/or intensity of wildfires and promotes the continued invasion of invasive grasses. Despite wide acceptance of the grass–fire cycle, questions linger about the relative roles that interspecific plant competition and fire play in ecosystem transformations. Location Sonoran Desert Arizona Upland of the Santa Catalina Mountains, Arizona, USA. Methods We measured species cover, density and saguaro (Carnegiea gigantea) size structure along gradients of Pennisetum ciliare invasion at 10 unburned/ungrazed P. ciliare patches. Regression models quantified differences in diversity, cover and density with respect to P. ciliare cover, and residence time and a Fisher's exact test detected demographic changes in saguaro populations. Because P. ciliare may have initially invaded locations that were both more invasible and less diverse, we ran analyses with and without the plots in which initial infestations were located. Results Richness and diversity decreased with P. ciliare cover as did cover and density of most dominant species. Richness and diversity declined with increasing time since invasion, suggesting an ongoing transformation. The proportion of old-to-young Carnegiea gigantea was significantly lower in plots with dominant P. ciliare cover. Main conclusions Rich desert scrub (15–25 species per plot) was transformed into depauperate grassland (2–5 species per plot) within 20 years following P. ciliare invasion without changes to the fire regime. While the onset of a grass–fire cycle may drive ecosystem change in the later stages and larger scales of grass invasions of arid lands, competition by P. ciliare can drive small-scale transformations earlier in the invasion. Linking competition-induced transformation rates with spatially explicit models of spread may be necessary for predicting landscape-level impacts on ecosystem processes in advance of a grass–fire cycle.

A synteny-based draft genome sequence of the forage grass Lolium perenne.

PubMed

Byrne, Stephen L; Nagy, Istvan; Pfeifer, Matthias; Armstead, Ian; Swain, Suresh; Studer, Bruno; Mayer, Klaus; Campbell, Jacqueline D; Czaban, Adrian; Hentrup, Stephan; Panitz, Frank; Bendixen, Christian; Hedegaard, Jakob; Caccamo, Mario; Asp, Torben

2015-11-01

Here we report the draft genome sequence of perennial ryegrass (Lolium perenne), an economically important forage and turf grass species that is widely cultivated in temperate regions worldwide. It is classified along with wheat, barley, oats and Brachypodium distachyon in the Pooideae sub-family of the grass family (Poaceae). Transcriptome data was used to identify 28,455 gene models, and we utilized macro-co-linearity between perennial ryegrass and barley, and synteny within the grass family, to establish a synteny-based linear gene order. The gametophytic self-incompatibility mechanism enables the pistil of a plant to reject self-pollen and therefore promote out-crossing. We have used the sequence assembly to characterize transcriptional changes in the stigma during pollination with both compatible and incompatible pollen. Characterization of the pollen transcriptome identified homologs to pollen allergens from a range of species, many of which were expressed to very high levels in mature pollen grains, and are potentially involved in the self-incompatibility mechanism. The genome sequence provides a valuable resource for future breeding efforts based on genomic prediction, and will accelerate the development of new varieties for more productive grasslands. © 2015 The Authors The Plant Journal © 2015 John Wiley & Sons Ltd.

Optimization of Lead Removal via Napier Grass in Synthetic Brackish Water using Response Surface Model

NASA Astrophysics Data System (ADS)

Hongsawat, P.; Suttiarporn, P.; Wutsanthia, K.; Kongsiri, G.

2018-03-01

The efficiency of the lead (Pb) phytoremediation by Napier grass was studied on the plant’s growth and plant’s tolerance on the Pb toxicity in synthetic brackish water. It was found that the plant was high tolerance to high level of Pb concentration (10 mg/l) in synthetic brackish water. Which revealed on the possibilities of plant’s growth under the presence of Pb contaminated condition. According to the Pb removal efficiency, the highest one (88.63±4.9%) was found at 10 ppm Pb concentration, 0.3 g/l NaCl concentration during the period 45 day. However, this study investigated the optimum condition for lead (Pb) removal from synthetic brackish water using phytoremediation treatment with Napier grass through a Box-Behnken Design. Three operational variables, i.e. Pb concentration (1, 5.5, 10 mg/l), NaCl (0.1, 0.3, 0.5 g/l) and period time (7, 26, 45 day), were determined. The results were provided evidence that the highest Pb removal efficiency (93.56%) from synthetic brackish water via Napier grass was Pb and NaCl concentration at 10 mg/l and 0.5 g/l during 45 day.

Purification effect of two typical water source vegetation buffer zones on land-sourced pollutants

NASA Astrophysics Data System (ADS)

Li, Gang

2017-03-01

Two vegetation buffer zones (tree-shrub-grass pattern and tree-grass pattern) were selected as test objects around Siming reservoir in Yuyao City of China. The effect of the storm runoff intensity (low and high intensity) and the buffer zone width (1 m, 3 m, 5 m, 7 m, 9 m, 12 m, 16 m) on pollutants (suspended solids, ammonium nitrogen and total phosphorus) was studied by the artificial simulation runoff. The results showed that with the increase of the width of buffer zone, the pollutant concentration was decreased. The purification effect of the two buffer zones on suspended solids and total phosphorus was basically stable at 52-55% and 34-37%, respectively. But the purification effect on ammonium nitrogen was the tree-shrub-grass pattern (69.7%) significantly better than that of tree-grass pattern (52.1%). The purification rate at the low runoff intensity was 1.8-2.0 times that at the high runoff intensity. The relationship between the purification rate and buffer zone width can be expressed by the natural logarithm equation, and the model adjustment coefficient was greater than 0.92.

Breeding bird territory placement in riparian wet meadows in relation to invasive reed canary grass, Phalaris arundinacea

USGS Publications Warehouse

Kirsch, E.M.; Gray, B.R.; Fox, T.J.; Thogmartin, W.E.

2007-01-01

Invasive plants are a growing concern worldwide for conservation of native habitats. In endangered wet meadow habitat in the Upper Midwestern United States, reed canary grass (Phalaris arundinacea) is a recognized problem and its prevalence is more widespread than the better-known invasive wetland plant purple loosestrife (Lythrum salicaria). Although resource managers are concerned about the effect of reed canary grass on birds, this is the first study to report how common wet meadow birds use habitat in relation to reed canary grass cover and dominance. We examined three response variables: territory placement, size of territories, and numbers of territories per plot in relation to cover of reed canary grass. Territory locations for Sedge Wren (Cistothorus platensis) and Song Sparrow (Melospiza melodia) were positively associated with reed canary grass cover, while those for Common Yellowthroat (Geothlypis trichas) were not. Only Swamp Sparrow (M. georgiana) territory locations were negatively associated with reed canary grass cover and dominance (which indicated a tendency to place territories where there was no reed canary grass or where many plant species occurred with reed canary grass). Swamp Sparrow territories were positively associated with vegetation height density and litter depth. Common Yellowthroat territories were positively associated with vegetation height density and shrub cover. Song Sparrow territories were negatively associated with litter depth. Reed canary grass cover within territories was not associated with territory size for any of these four bird species. Territory density per plot was not associated with average reed canary grass cover of plots for all four species. Sedge Wrens and Song Sparrows may not respond negatively to reed canary grass because this grass is native to wet meadows of North America, and in the study area it merely replaces other tall lush plants. Avoidance of reed canary grass by Swamp Sparrows may be mediated through their preference for wet areas where reed canary grass typically does not dominate. ?? 2007, The Society of Wetland Scientists.

Remote sensing of St. Augustine Decline (SAD) disease. [spectral reflectance of healthy and diseased grass

NASA Technical Reports Server (NTRS)

Odle, W. C.

1976-01-01

Laboratory and field spectral reflectance measurements of healthy and infected St. Augustine grass were made using several different instruments. Spectral differences between healthy and infected grass occured in the visible and near infrared regions. Multiband and color infrared photographs were taken of healthy and diseased turf from ground-based platforms and low altitude aircraft. Qualitative (density slicing) and quantitative (transmission densitometry) analyses revealed distinct tonal differences between healthy and St. Augustine disease (SAD) infected grass. Similar experiments are described for determining if healthy and diseased grass can be distinguished from waterstressed grass and grass deficient in either nitrogen or iron.

Preference for C4 shade grasses increases hatchling performance in the butterfly, Bicyclus safitza.

PubMed

Nokelainen, Ossi; Ripley, Brad S; van Bergen, Erik; Osborne, Colin P; Brakefield, Paul M

2016-08-01

The Miocene radiation of C4 grasses under high-temperature and low ambient CO 2 levels occurred alongside the transformation of a largely forested landscape into savanna. This inevitably changed the host plant regime of herbivores, and the simultaneous diversification of many consumer lineages, including Bicyclus butterflies in Africa, suggests that the radiations of grasses and grazers may be evolutionary linked. We examined mechanisms for this plant-herbivore interaction with the grass-feeding Bicyclus safitza in South Africa. In a controlled environment, we tested oviposition preference and hatchling performance on local grasses with C3 or C4 photosynthetic pathways that grow either in open or shaded habitats. We predicted preference for C3 plants due to a hypothesized lower processing cost and higher palatability to herbivores. In contrast, we found that females preferred C4 shade grasses rather than either C4 grasses from open habitats or C3 grasses. The oviposition preference broadly followed hatchling performance, although hatchling survival was equally good on C4 or C3 shade grasses. This finding was explained by leaf toughness; shade grasses were softer than grasses from open habitats. Field monitoring revealed a preference of adults for shaded habitats, and stable isotope analysis of field-sampled individuals confirmed their preference for C4 grasses as host plants. Our findings suggest that plant-herbivore interactions can influence the direction of selection in a grass-feeding butterfly. Based on this work, we postulate future research to test whether these interactions more generally contribute to radiations in herbivorous insects via expansions into new, unexploited ecological niches.

Effects of sediment burial on grass carp, Ctenopharyngodon idella (Valenciennes,1844), eggs

USGS Publications Warehouse

George, Amy E.; Chapman, Duane C.; Deters, Joseph E.; Erwin, Susannah O.; Hayer, Cari-Ann

2015-01-01

It is thought that grass carp (Ctenopharyngodon idella) eggs must remain suspended in the water column in order to hatch successfully. Using sand, the effects of varying sediment levels on grass carp eggs were tested at different developmental states and temperatures. Survival was high (15–35%, depending on temperature and trial) in the unburied treatment where eggs rested on a sand bed but were not covered by sediment. Survival was lower in the partial burial (5–10%) and very low (0–4%) in the full burial treatment. In all treatments, delayed hatching (organisms remaining in membranes past the stage of hatching competence) was noted. Deformities such as missing heads and pericardial edema occurred at high rates in the partial and full burials. Eggs that come in contact with the benthos and are resuspended in the water column should be considered in embryonic drift models.

The Genetics of Biofuel Traits in Panicum Grasses: Developing a Model System with Diploid Panicum Hallii

DOE Office of Scientific and Technical Information (OSTI.GOV)

Juenger, Thomas; Wolfrum, Ed

Our DOE funded project focused on characterizing natural variation in C4 perennial grasses including switchgrass (Panicum virgatum) and Hall’s panicgrass (Panicum hallii). The main theme of our project was to better understand traits linked with plant performance and that impact the utility of plant biomass as a biofuel feedstock. In addition, our project developed tools and resources for studying genetic variation in Panicum hallii. Our project successfully screened both Panicum virgatum and Panicum hallii diverse natural collections for a host of phenotypes, developed genetic mapping populations for both species, completed genetic mapping for biofuel related traits, and helped in themore » development of genomic resources of Panicum hallii. Together, these studies have improved our understanding of the role of genetic and environmental factors in impacting plant performance. This information, along with new tools, will help foster the improvement of perennial grasses for feedstock applications.« less

Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.

PubMed

Zhang, Gengyun; Liu, Xin; Quan, Zhiwu; Cheng, Shifeng; Xu, Xun; Pan, Shengkai; Xie, Min; Zeng, Peng; Yue, Zhen; Wang, Wenliang; Tao, Ye; Bian, Chao; Han, Changlei; Xia, Qiuju; Peng, Xiaohua; Cao, Rui; Yang, Xinhua; Zhan, Dongliang; Hu, Jingchu; Zhang, Yinxin; Li, Henan; Li, Hua; Li, Ning; Wang, Junyi; Wang, Chanchan; Wang, Renyi; Guo, Tao; Cai, Yanjie; Liu, Chengzhang; Xiang, Haitao; Shi, Qiuxiang; Huang, Ping; Chen, Qingchun; Li, Yingrui; Wang, Jun; Zhao, Zhihai; Wang, Jian

2012-05-13

Foxtail millet (Setaria italica), a member of the Poaceae grass family, is an important food and fodder crop in arid regions and has potential for use as a C(4) biofuel. It is a model system for other biofuel grasses, including switchgrass and pearl millet. We produced a draft genome (∼423 Mb) anchored onto nine chromosomes and annotated 38,801 genes. Key chromosome reshuffling events were detected through collinearity identification between foxtail millet, rice and sorghum including two reshuffling events fusing rice chromosomes 7 and 9, 3 and 10 to foxtail millet chromosomes 2 and 9, respectively, that occurred after the divergence of foxtail millet and rice, and a single reshuffling event fusing rice chromosome 5 and 12 to foxtail millet chromosome 3 that occurred after the divergence of millet and sorghum. Rearrangements in the C(4) photosynthesis pathway were also identified.

Spatial methods for deriving crop rotation history

NASA Astrophysics Data System (ADS)

Mueller-Warrant, George W.; Trippe, Kristin M.; Whittaker, Gerald W.; Anderson, Nicole P.; Sullivan, Clare S.

2017-08-01

Benefits of converting 11 years of remote sensing classification data into cropping history of agricultural fields included measuring lengths of rotation cycles and identifying specific sequences of intervening crops grown between final years of old grass seed stands and establishment of new ones. Spatial and non-spatial methods were complementary. Individual-year classification errors were often correctable in spreadsheet-based non-spatial analysis, whereas their presence in spatial data generally led to exclusion of fields from further analysis. Markov-model testing of non-spatial data revealed that year-to-year cropping sequences did not match average frequencies for transitions among crops grown in western Oregon, implying that rotations into new grass seed stands were influenced by growers' desires to achieve specific objectives. Moran's I spatial analysis of length of time between consecutive grass seed stands revealed that clustering of fields was relatively uncommon, with high and low value clusters only accounting for 7.1 and 6.2% of fields.

Facilitation or Competition? Tree Effects on Grass Biomass across a Precipitation Gradient

PubMed Central

Moustakas, Aristides; Kunin, William E.; Cameron, Tom C.; Sankaran, Mahesh

2013-01-01

Savanna ecosystems are dominated by two distinct plant life forms, grasses and trees, but the interactions between them are poorly understood. Here, we quantified the effects of isolated savanna trees on grass biomass as a function of distance from the base of the tree and tree height, across a precipitation gradient in the Kruger National Park, South Africa. Our results suggest that mean annual precipitation (MAP) mediates the nature of tree-grass interactions in these ecosystems, with the impact of trees on grass biomass shifting qualitatively between 550 and 737 mm MAP. Tree effects on grass biomass were facilitative in drier sites (MAP≤550 mm), with higher grass biomass observed beneath tree canopies than outside. In contrast, at the wettest site (MAP = 737 mm), grass biomass did not differ significantly beneath and outside tree canopies. Within this overall precipitation-driven pattern, tree height had positive effect on sub-canopy grass biomass at some sites, but these effects were weak and not consistent across the rainfall gradient. For a more synthetic understanding of tree-grass interactions in savannas, future studies should focus on isolating the different mechanisms by which trees influence grass biomass, both positively and negatively, and elucidate how their relative strengths change over broad environmental gradients. PMID:23451137

Fusarium graminearum: pathogen or endophyte of North American grasses?

PubMed

Lofgren, Lotus A; LeBlanc, Nicholas R; Certano, Amanda K; Nachtigall, Jonny; LaBine, Kathryn M; Riddle, Jakob; Broz, Karen; Dong, Yanhong; Bethan, Bianca; Kafer, Christopher W; Kistler, H Corby

2018-02-01

Mycotoxin-producing Fusarium graminearum and related species cause Fusarium head blight on cultivated grasses, such as wheat and barley. However, these Fusarium species may have had a longer evolutionary history with North American grasses than with cultivated crops and may interact with the ancestral hosts in ways which are biochemically distinct. We assayed 25 species of asymptomatic native grasses for the presence of Fusarium species and confirmed infected grasses as hosts using re-inoculation tests. We examined seed from native grasses for the presence of mycotoxin-producing Fusarium species and evaluated the ability of these fungi to produce mycotoxins in both native grass and wheat hosts using biochemical analysis. Mycotoxin-producing Fusarium species were shown to be prevalent in phylogenetically diverse native grasses, colonizing multiple tissue types, including seeds, leaves and inflorescence structures. Artificially inoculated grasses accumulated trichothecenes to a much lesser extent than wheat, and naturally infected grasses showed little to no accumulation. Native North American grasses are commonly inhabited by Fusarium species, but appear to accommodate these toxigenic fungi differently from cultivated crops. This finding highlights how host identity and evolutionary history may influence the outcome of plant-fungal interactions and may inform future efforts in crop improvement. No claim to original US Government works. New Phytologist © 2017 New Phytologist Trust.

78 FR 54658 - Allergenic Products Advisory Committee; Notice of Meeting

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-05

... Vernal Grass, Perennial Ryegrass, Timothy Grass, Orchard Grass, and Kentucky Bluegrass Mixed Pollens... Grastek, a Timothy Grass Pollen Allergen Extract tablet for sublingual use, manufactured by Merck. FDA...

First report of crown rust (Puccinia coronata var. gibberosa) on blue oat grass (Helictotrichon sempervirens) in the United States

USDA-ARS?s Scientific Manuscript database

Ornamental grasses are popular decorative plants, with sales valued at $124 million in the U. S. in 2009. One common ornamental grass is blue oat grass, Helictotrichon sempervirens (Vill.) Pilg., a large blue-green grass native to Europe. In 2011, H. sempervirens plants in a commercial nursery in ...

75 FR 80343 - Extension of Tolerances for Emergency Exemptions (Multiple Chemicals)

Federal Register 2010, 2011, 2012, 2013, 2014

2010-12-22

... Timothy grass for control of Banks grass mite in Nevada. This regulation extends time-limited tolerances... fenoxaprop-ethyl in or on grass grown for seed for control of noxious weed species in Oregon. This regulation... on grass forage and grass hay at 0.05 ppm for an additional 3-year period. These tolerances will...

Shade Tolerance of Festuca paradoxa Desv., a Cool-Season Grass Native to North America

Treesearch

Nadia Navarrete-Tindall; Larry Mechlin; J. W. Van Sambeek

2003-01-01

Paradox grass (Festuca paradoxa Desv.) is a native cool-season grass found in prairies and forest openings. Paradox grass has not been included in tree plantings. To determine paradox grass adaptation to shaded environmmts, we established a pot experiment in the shade laboratory at the University of Missouri Horticulture and Agroforestry Research...

75 FR 17573 - Nicosulfuron; Pesticide Tolerances

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-07

..., meat byproducts; goat, fat; goat, meat; goat, meat byproducts; grass, forage; grass, hay; horse, fat... grass, forage at 9.0 parts per million (ppm); grass, hay at 25.0 ppm; fat (of cattle, goat, hog, horse... at 0.05 ppm; goat, fat at 0.01 ppm; goat, meat at 0.01 ppm; goat, meat byproducts at 0.05 ppm; grass...

77 FR 12740 - Trinexapac-ethyl; Pesticide Tolerances

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-02

... CGA-179500, in or on grass, forage, grown for seed at 1.60 parts per million (ppm); grass, hay, grown for seed at 3.5 ppm; grass, seed screenings, grown for seed at 45.0 ppm; grass, straw, grown for seed..., Sugarcane, and Grasses Grown for Seed'' p. 48 in docket ID number EPA-HQ-OPP-2010-0524. B. Toxicological...

Rainfall interception by annual grass and chaparral . . . losses compared

Treesearch

Edward S. Corbett; Robert P. Crouse

1968-01-01

Loss of precipitation due to interception by annual grass and grass litter was measured during three rainy seasons on the San Dimas Experimental Forest, in southern California. Interception loss from annual grass averaged 7.9 percent; that from mature chaparral cover, 12.8 percent. If chaparral stands were converted to grass, an estimated 1.3 inches of gross...

Optimization of delignification of two Pennisetum grass species by NaOH pretreatment using Taguchi and ANN statistical approach.

PubMed

Mohaptra, Sonali; Dash, Preeti Krishna; Behera, Sudhanshu Shekar; Thatoi, Hrudayanath

2016-01-01

In the bioconversion of lignocelluloses for bioethanol, pretreatment seems to be the most important step which improves the elimination of the lignin and hemicelluloses content, exposing cellulose to further hydrolysis. The present study discusses the application of dynamic statistical techniques like the Taguchi method and artificial neural network (ANN) in the optimization of pretreatment of lignocellulosic biomasses such as Hybrid Napier grass (HNG) (Pennisetum purpureum) and Denanath grass (DG) (Pennisetum pedicellatum), using alkali sodium hydroxide. This study analysed and determined a parameter combination with a low number of experiments by using the Taguchi method in which both the substrates can be efficiently pretreated. The optimized parameters obtained from the L16 orthogonal array are soaking time (18 and 26 h), temperature (60°C and 55°C), and alkali concentration (1%) for HNG and DG, respectively. High performance liquid chromatography analysis of the optimized pretreated grass varieties confirmed the presence of glucan (47.94% and 46.50%), xylan (9.35% and 7.95%), arabinan (2.15% and 2.2%), and galactan/mannan (1.44% and 1.52%) for HNG and DG, respectively. Physicochemical characterization studies of native and alkali-pretreated grasses were carried out by scanning electron microscopy and Fourier transformation Infrared spectroscopy which revealed some morphological differences between the native and optimized pretreated samples. Model validation by ANN showed a good agreement between experimental results and the predicted responses.

Climate, phylogeny and the ecological distribution of C4 grasses.

PubMed

Edwards, Erika J; Still, Christopher J

2008-03-01

'C4 photosynthesis' refers to a suite of traits that increase photosynthesis in high light and high temperature environments. Most C4 plants are grasses, which dominate tropical and subtropical grasslands and savannas but are conspicuously absent from cold growing season climates. Physiological attributes of C4 photosynthesis have been invoked to explain C4 grass biogeography; however, the pathway evolved exclusively in grass lineages of tropical origin, suggesting that the prevalence of C4 grasses in warm climates could be due to other traits inherited from their non-C4 ancestors. Here we investigate the relative influences of phylogeny and photosynthetic pathway in determining the ecological distributions of C4 grasses in Hawaii. We find that the restriction of C4 grasses to warmer areas is due largely to their evolutionary history as members of a warm-climate grass clade, but that the pathway does appear to confer a competitive advantage to grasses in more arid environments.

The use of food waste-based diets and Napier grass to culture grass carp: growth performance and contaminants contained in cultured fish.

PubMed

Cheng, Zhang; Mo, Wing-Yin; Nie, Xiang-Ping; Li, Kai-Bing; Choi, Wai-Ming; Man, Yu-Bon; Wong, Ming-Hung

2016-04-01

The present study used commercial feeds, food waste feeds, Napier grass, and mixed feeds (food waste feed to Napier grass ratio, 1:10) to feed grass carp (Ctenopharyngodon idellus). The results indicated that grass carp fed with food waste feeds and mix feeds achieved growth performance (based on specific growth rate and feed conversion ratio) that was similar to commercial feeds (p > 0.05). Concentrations of metalloid/metals in food waste feeds and polycyclic aromatic hydrocarbons (PAHs) in Napier grass were relatively higher than other types of fish feeds (p < 0.05). However, most of the metalloid/metals and PAH levels in fish fed with four types of fish feeds were not significantly different (p > 0.05). These findings show that food waste feeds are suitable for using in the production of fish feed and Napier grass can be served as supplemental feeds for grass carp, and hence reducing the production cost.

Rooting depth varies differentially in trees and grasses as a function of mean annual rainfall in an African savanna.

PubMed

Holdo, Ricardo M; Nippert, Jesse B; Mack, Michelle C

2018-01-01

A significant fraction of the terrestrial biosphere comprises biomes containing tree-grass mixtures. Forecasting vegetation dynamics in these environments requires a thorough understanding of how trees and grasses use and compete for key belowground resources. There is disagreement about the extent to which tree-grass vertical root separation occurs in these ecosystems, how this overlap varies across large-scale environmental gradients, and what these rooting differences imply for water resource availability and tree-grass competition and coexistence. To assess the extent of tree-grass rooting overlap and how tree and grass rooting patterns vary across resource gradients, we examined landscape-level patterns of tree and grass functional rooting depth along a mean annual precipitation (MAP) gradient extending from ~ 450 to ~ 750 mm year -1 in Kruger National Park, South Africa. We used stable isotopes from soil and stem water to make inferences about relative differences in rooting depth between these two functional groups. We found clear differences in rooting depth between grasses and trees across the MAP gradient, with grasses generally exhibiting shallower rooting profiles than trees. We also found that trees tended to become more shallow-rooted as a function of MAP, to the point that trees and grasses largely overlapped in terms of rooting depth at the wettest sites. Our results reconcile previously conflicting evidence for rooting overlap in this system, and have important implications for understanding tree-grass dynamics under altered precipitation scenarios.

78 FR 70864 - Metaldehyde; Pesticide Tolerances

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-27

... plus cob with husks removed at 0.05 ppm; grass, forage at 1.5 ppm; grass, hay at 1.8 ppm; leaf petioles...: ``Metaldehyde; Human Health Risk Assessment for Proposed Uses on Grass Grown for Seed, Leaf Petioles [Crop....10 ppm; grass, forage from 1.5 ppm to 2.0 ppm; grass, hay from 1.8 ppm to 2.0 ppm; leaf petioles...

Evaluation of molecular basis of cross reactivity between rye and Bermuda grass pollen allergens.

PubMed

Tiwari, Ruby; Bhalla, Prem L; Singh, Mohan B

2009-12-01

Allergenic cross reactivity between the members of the Pooids (Lolium perenne, Phleum pratense, and Poa pratensis) and Chloridoids (Cynodon dactylon and Paspalum notatum) is well established. Studies using crude extracts in the past have demonstrated limited cross reactivity between the Pooids and the Chloridoids suggesting separate diagnosis and therapy. However, little is known regarding the molecular basis for the limited cross reactivity observed between the 2 groups of grasses. The present study was undertaken to gain insights into the molecular basis of cross allergenicity between the major allergens from rye and Bermuda grass pollens. Immunoblot inhibition tests were carried out to determine the specificity of the proteins involved in cross reactivity. Crude pollen extract and bacterially expressed and purified recombinant Lol p 1and Lol p 5 from rye grass were subjected to cross inhibition experiments with crude and purified recombinant Cyn d 1 from Bermuda grass using sera from patients allergic to rye grass pollen. The immunoblot inhibition studies revealed a high degree of cross inhibition between the group 1 allergens. In contrast, a complete lack of inhibition was observed between Bermuda grass group 1 allergen rCyn d 1, and rye grass group 5 allergen rLol p 5. Crude rye grass extract strongly inhibited IgE reactivity to Bermuda grass, whereas crude Bermuda grass pollen extract showed a weaker inhibition. Our data suggests that a possible explanation for the limited cross reactivity between the Pooids and Chloridoids may, in part, be due to the absence of group 5 allergen from Chloridoid grasses. This approach of using purified proteins may be applied to better characterize the cross allergenicity patterns between different grass pollen allergens.

Genomics-Based Exploration of Virulence Determinants and Host-Specific Adaptations of Pseudomonas syringae Strains Isolated from Grasses

PubMed Central

Dudnik, Alexey; Dudler, Robert

2014-01-01

The Pseudomonas syringae species complex has recently been named the number one plant pathogen, due to its economic and environmental impacts, as well as for its role in scientific research. The bacterium has been repeatedly reported to cause outbreaks on bean, cucumber, stone fruit, kiwi and olive tree, as well as on other crop and non-crop plants. It also serves as a model organism for research on the Type III secretion system (T3SS) and plant-pathogen interactions. While most of the current work on this pathogen is either carried out on one of three model strains found on dicot plants with completely sequenced genomes or on isolates obtained from recent outbreaks, not much is known about strains isolated from grasses (Poaceae). Here, we use comparative genomics in order to identify putative virulence-associated genes and other Poaceae-specific adaptations in several newly available genome sequences of strains isolated from grass species. All strains possess only a small number of known Type III effectors, therefore pointing to the importance of non-Type III secreted virulence factors. The implications of this finding are discussed. PMID:25437611

Effects of vegetation types on soil moisture estimation from the normalized land surface temperature versus vegetation index space

NASA Astrophysics Data System (ADS)

Zhang, Dianjun; Zhou, Guoqing

2015-12-01

Soil moisture (SM) is a key variable that has been widely used in many environmental studies. Land surface temperature versus vegetation index (LST-VI) space becomes a common way to estimate SM in optical remote sensing applications. Normalized LST-VI space is established by the normalized LST and VI to obtain the comparable SM in Zhang et al. (Validation of a practical normalized soil moisture model with in situ measurements in humid and semiarid regions [J]. International Journal of Remote Sensing, DOI: 10.1080/01431161.2015.1055610). The boundary conditions in the study were set to limit the point A (the driest bare soil) and B (the wettest bare soil) for surface energy closure. However, no limitation was installed for point D (the full vegetation cover). In this paper, many vegetation types are simulated by the land surface model - Noah LSM 3.2 to analyze the effects on soil moisture estimation, such as crop, grass and mixed forest. The locations of point D are changed with vegetation types. The normalized LST of point D for forest is much lower than crop and grass. The location of point D is basically unchanged for crop and grass.

A Web-based Visualization System for Three Dimensional Geological Model using Open GIS

NASA Astrophysics Data System (ADS)

Nemoto, T.; Masumoto, S.; Nonogaki, S.

2017-12-01

A three dimensional geological model is an important information in various fields such as environmental assessment, urban planning, resource development, waste management and disaster mitigation. In this study, we have developed a web-based visualization system for 3D geological model using free and open source software. The system has been successfully implemented by integrating web mapping engine MapServer and geographic information system GRASS. MapServer plays a role of mapping horizontal cross sections of 3D geological model and a topographic map. GRASS provides the core components for management, analysis and image processing of the geological model. Online access to GRASS functions has been enabled using PyWPS that is an implementation of WPS (Web Processing Service) Open Geospatial Consortium (OGC) standard. The system has two main functions. Two dimensional visualization function allows users to generate horizontal and vertical cross sections of 3D geological model. These images are delivered via WMS (Web Map Service) and WPS OGC standards. Horizontal cross sections are overlaid on the topographic map. A vertical cross section is generated by clicking a start point and an end point on the map. Three dimensional visualization function allows users to visualize geological boundary surfaces and a panel diagram. The user can visualize them from various angles by mouse operation. WebGL is utilized for 3D visualization. WebGL is a web technology that brings hardware-accelerated 3D graphics to the browser without installing additional software. The geological boundary surfaces can be downloaded to incorporate the geologic structure in a design on CAD and model for various simulations. This study was supported by JSPS KAKENHI Grant Number JP16K00158.

Energy sorghum--a genetic model for the design of C4 grass bioenergy crops.

PubMed

Mullet, John; Morishige, Daryl; McCormick, Ryan; Truong, Sandra; Hilley, Josie; McKinley, Brian; Anderson, Robert; Olson, Sara N; Rooney, William

2014-07-01

Sorghum is emerging as an excellent genetic model for the design of C4 grass bioenergy crops. Annual energy Sorghum hybrids also serve as a source of biomass for bioenergy production. Elucidation of Sorghum's flowering time gene regulatory network, and identification of complementary alleles for photoperiod sensitivity, enabled large-scale generation of energy Sorghum hybrids for testing and commercial use. Energy Sorghum hybrids with long vegetative growth phases were found to accumulate more than twice as much biomass as grain Sorghum, owing to extended growing seasons, greater light interception, and higher radiation use efficiency. High biomass yield, efficient nitrogen recycling, and preferential accumulation of stem biomass with low nitrogen content contributed to energy Sorghum's elevated nitrogen use efficiency. Sorghum's integrated genetics-genomics-breeding platform, diverse germplasm, and the opportunity for annual testing of new genetic designs in controlled environments and in multiple field locations is aiding fundamental discovery, and accelerating the improvement of biomass yield and optimization of composition for biofuels production. Recent advances in wide hybridization between Sorghum and other C4 grasses could allow the deployment of improved genetic designs of annual energy Sorghums in the form of wide-hybrid perennial crops. The current trajectory of energy Sorghum genetic improvement indicates that it will be possible to sustainably produce biofuels from C4 grass bioenergy crops that are cost competitive with petroleum-based transportation fuels. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Brachypodium distachyon. A New Model System for Functional Genomics in Grasses1

PubMed Central

Draper, John; Mur, Luis A.J.; Jenkins, Glyn; Ghosh-Biswas, Gadab C.; Bablak, Pauline; Hasterok, Robert; Routledge, Andrew P.M.

2001-01-01

A new model for grass functional genomics is described based on Brachypodium distachyon, which in the evolution of the Pooideae diverged just prior to the clade of “core pooid” genera that contain the majority of important temperate cereals and forage grasses. Diploid ecotypes of B. distachyon (2n = 10) have five easily distinguishable chromosomes that display high levels of chiasma formation at meiosis. The B. distachyon nuclear genome was indistinguishable in size from that of Arabidopsis, making it the simplest genome described in grasses to date. B. distachyon is a self-fertile, inbreeding annual with a life cycle of less than 4 months. These features, coupled with its small size (approximately 20 cm at maturity), lack of seed-head shatter, and undemanding growth requirements should make it amenable to high-throughput genetics and mutant screens. Immature embryos exhibited a high capacity for plant regeneration via somatic embryogenesis. Regenerated plants display very low levels of albinism and have normal fertility. A simple transformation system has been developed based on microprojectile bombardment of embryogenic callus and hygromycin selection. Selected B. distachyon ecotypes were resistant to all tested cereal-adapted Blumeria graminis species and cereal brown rusts (Puccinia reconditia). In contrast, different ecotypes displayed resistance or disease symptoms following challenge with the rice blast pathogen (Magnaporthe grisea) and wheat/barley yellow stripe rusts (Puccinia striformis). Despite its small stature, B. distachyon has large seeds that should prove useful for studies on grain filling. Such biological characteristics represent important traits for study in temperate cereals. PMID:11743099

Annual grass invasion in sagebrush-steppe: The relative importance of climate, soil properties and biotic interactions

USGS Publications Warehouse

Bansal, Sheel; Sheley, Roger L.

2016-01-01

The invasion by winter-annual grasses (AGs) such as Bromus tectorum into sagebrush steppe throughout the western USA is a classic example of a biological invasion with multiple, interacting climate, soil and biotic factors driving the invasion, although few studies have examined all components together. Across a 6000-km2 area of the northern Great Basin, we conducted a field assessment of 100 climate, soil, and biotic (functional group abundances, diversity) factors at each of 90 sites that spanned an invasion gradient ranging from 0 to 100 % AG cover. We first determined which biotic and abiotic factors had the strongest correlative relationships with AGs and each resident functional group. We then used regression and structural equation modeling to explore how multiple ecological factors interact to influence AG abundance. Among biotic interactions, we observed negative relationships between AGs and biodiversity, perennial grass cover, resident species richness, biological soil crust cover and shrub density, whereas perennial and annual forb cover, tree cover and soil microbial biomass had no direct linkage to AG. Among abiotic factors, AG cover was strongly related to climate (increasing cover with increasing temperature and aridity), but had weak relationships with soil factors. Our structural equation model showed negative effects of perennial grasses and biodiversity on AG cover while integrating the negative effects of warmer climate and positive influence of belowground processes on resident functional groups. Our findings illustrate the relative importance of biotic interactions and climate on invasive abundance, while soil properties appear to have stronger relationships with resident biota than with invasives.

Integrative analysis and expression profiling of secondary cell wall genes in C4 biofuel model Setaria italica reveals targets for lignocellulose bioengineering

PubMed Central

Muthamilarasan, Mehanathan; Khan, Yusuf; Jaishankar, Jananee; Shweta, Shweta; Lata, Charu; Prasad, Manoj

2015-01-01

Several underutilized grasses have excellent potential for use as bioenergy feedstock due to their lignocellulosic biomass. Genomic tools have enabled identification of lignocellulose biosynthesis genes in several sequenced plants. However, the non-availability of whole genome sequence of bioenergy grasses hinders the study on bioenergy genomics and their genomics-assisted crop improvement. Foxtail millet (Setaria italica L.; Si) is a model crop for studying systems biology of bioenergy grasses. In the present study, a systematic approach has been used for identification of gene families involved in cellulose (CesA/Csl), callose (Gsl) and monolignol biosynthesis (PAL, C4H, 4CL, HCT, C3H, CCoAOMT, F5H, COMT, CCR, CAD) and construction of physical map of foxtail millet. Sequence alignment and phylogenetic analysis of identified proteins showed that monolignol biosynthesis proteins were highly diverse, whereas CesA/Csl and Gsl proteins were homologous to rice and Arabidopsis. Comparative mapping of foxtail millet lignocellulose biosynthesis genes with other C4 panicoid genomes revealed maximum homology with switchgrass, followed by sorghum and maize. Expression profiling of candidate lignocellulose genes in response to different abiotic stresses and hormone treatments showed their differential expression pattern, with significant higher expression of SiGsl12, SiPAL2, SiHCT1, SiF5H2, and SiCAD6 genes. Further, due to the evolutionary conservation of grass genomes, the insights gained from the present study could be extrapolated for identifying genes involved in lignocellulose biosynthesis in other biofuel species for further characterization. PMID:26583030

Integrative analysis and expression profiling of secondary cell wall genes in C4 biofuel model Setaria italica reveals targets for lignocellulose bioengineering.

PubMed

Muthamilarasan, Mehanathan; Khan, Yusuf; Jaishankar, Jananee; Shweta, Shweta; Lata, Charu; Prasad, Manoj

2015-01-01

Several underutilized grasses have excellent potential for use as bioenergy feedstock due to their lignocellulosic biomass. Genomic tools have enabled identification of lignocellulose biosynthesis genes in several sequenced plants. However, the non-availability of whole genome sequence of bioenergy grasses hinders the study on bioenergy genomics and their genomics-assisted crop improvement. Foxtail millet (Setaria italica L.; Si) is a model crop for studying systems biology of bioenergy grasses. In the present study, a systematic approach has been used for identification of gene families involved in cellulose (CesA/Csl), callose (Gsl) and monolignol biosynthesis (PAL, C4H, 4CL, HCT, C3H, CCoAOMT, F5H, COMT, CCR, CAD) and construction of physical map of foxtail millet. Sequence alignment and phylogenetic analysis of identified proteins showed that monolignol biosynthesis proteins were highly diverse, whereas CesA/Csl and Gsl proteins were homologous to rice and Arabidopsis. Comparative mapping of foxtail millet lignocellulose biosynthesis genes with other C4 panicoid genomes revealed maximum homology with switchgrass, followed by sorghum and maize. Expression profiling of candidate lignocellulose genes in response to different abiotic stresses and hormone treatments showed their differential expression pattern, with significant higher expression of SiGsl12, SiPAL2, SiHCT1, SiF5H2, and SiCAD6 genes. Further, due to the evolutionary conservation of grass genomes, the insights gained from the present study could be extrapolated for identifying genes involved in lignocellulose biosynthesis in other biofuel species for further characterization.

Effects of climate and water balance across grasslands of varying C3 and C4 grass cover

USGS Publications Warehouse

Witwicki, Dana L.; Munson, Seth M.; Thoma, David P.

2016-01-01

Climate change in grassland ecosystems may lead to divergent shifts in the abundance and distribution of C3 and C4 grasses. Many studies relate mean climate conditions over relatively long time periods to plant cover, but there is still much uncertainty about how the balance of C3and C4 species will be affected by climate at a finer temporal scale than season (individual events to months). We monitored cover at five grassland sites with co-dominant C3 and C4 grass species or only dominant C3 grass species for 6 yr in national parks across the Colorado Plateau region to assess the influence of specific months of climate and water balance on changes in grass cover. C4 grass cover increased and decreased to a larger degree than C3 grass cover with extremely dry and wet consecutive years, but this response varied by ecological site. Climate and water balance explained 10–49% of the inter-annual variability of cover of C3 and C4 grasses at all sites. High precipitation in the spring and in previous year monsoon storms influenced changes in cover of C4 grasses, with measures of water balance in the same months explaining additional variability. C3 grasses in grasslands where they were dominant were influenced primarily by longer periods of climate, while C3 grasses in grasslands where they were co-dominant with C4 grasses were influenced little by climate anomalies at either short or long periods of time. Our results suggest that future changes in spring and summer climate and water balance are likely to affect cover of both C3 and C4 grasses, but cover of C4 grasses may be affected more strongly, and the degree of change will depend on soils and topography where they are growing and the timing of the growing season.

Interplanting Annual Ryegrass, Wheat, Oat, and Corn to Mitigate Iron Deficiency in Dry Beans

PubMed Central

Omondi, Emmanuel Chiwo; Kniss, Andrew R.

2014-01-01

This study evaluated whether grass intercropping can be used to alleviate Fe deficiency chlorosis in dry beans (Phaseolus vulgaris L.) grown in high pH, calcareous soils with low organic matter. Field studies were conducted at the University of Wyoming Sustainable Agriculture Research and Extension Center in 2009 and 2010. Black- and navy beans were grown alone or intercropped with annual ryegrass (Lolium multiflorum Lam.), oat (Avena sativa L.), corn (Zea mays L.), or spring wheat (Triticum aestivum L.) in a two-factor factorial strip-plot randomized complete block design. All four grass species increased chlorophyll intensity in dry beans. However, grass species did not increase iron (Fe) concentration in dry bean tissues suggesting inefficient utilization of Fe present in the dry bean tissues. In 2009, nitrate-nitrogen (NO3-N) and manganese (Mn) concentration in bean tissue were greater in bean monoculture than in grass intercropped beans. Bean monoculture also had greater soil NO3-N concentrations than grass intercropped treatments. In 2009, grass intercrops reduced dry bean yield >25% compared to bean monoculture. Annual ryegrass was the least competitive of the four annual grass species. This suggests that competition from grasses for nutrients, water, or light may have outweighed benefits accruing from grass intercropping. Additional studies are required to determine the appropriate grass and dry bean densities, as well as the optimum time of grass removal. PMID:25536084

Interplanting annual ryegrass, wheat, oat, and corn to mitigate iron deficiency in dry beans.

PubMed

Omondi, Emmanuel Chiwo; Kniss, Andrew R

2014-01-01

This study evaluated whether grass intercropping can be used to alleviate Fe deficiency chlorosis in dry beans (Phaseolus vulgaris L.) grown in high pH, calcareous soils with low organic matter. Field studies were conducted at the University of Wyoming Sustainable Agriculture Research and Extension Center in 2009 and 2010. Black- and navy beans were grown alone or intercropped with annual ryegrass (Lolium multiflorum Lam.), oat (Avena sativa L.), corn (Zea mays L.), or spring wheat (Triticum aestivum L.) in a two-factor factorial strip-plot randomized complete block design. All four grass species increased chlorophyll intensity in dry beans. However, grass species did not increase iron (Fe) concentration in dry bean tissues suggesting inefficient utilization of Fe present in the dry bean tissues. In 2009, nitrate-nitrogen (NO3-N) and manganese (Mn) concentration in bean tissue were greater in bean monoculture than in grass intercropped beans. Bean monoculture also had greater soil NO3-N concentrations than grass intercropped treatments. In 2009, grass intercrops reduced dry bean yield >25% compared to bean monoculture. Annual ryegrass was the least competitive of the four annual grass species. This suggests that competition from grasses for nutrients, water, or light may have outweighed benefits accruing from grass intercropping. Additional studies are required to determine the appropriate grass and dry bean densities, as well as the optimum time of grass removal.

7 CFR 201.51a - Special procedures for purity analysis.

Code of Federal Regulations, 2011 CFR

2011-01-01

... Percent of single units of each kind Chewings fescue Red fescue Orchard-grass Crested wheat-grassb Pubes-cent wheat-grass Intermediate wheat-grass Tall wheat-grass c Western wheat-grassc Smooth brome 50 or...

7 CFR 201.51a - Special procedures for purity analysis.

Code of Federal Regulations, 2010 CFR

2010-01-01

... Percent of single units of each kind Chewings fescue Red fescue Orchard-grass Crested wheat-grassb Pubes-cent wheat-grass Intermediate wheat-grass Tall wheat-grass c Western wheat-grassc Smooth brome 50 or...

UV induced visual cues in grasses

PubMed Central

Baby, Sabulal; Johnson, Anil John; Govindan, Balaji; Lukose, Sujith; Gopakumar, Bhaskaran; Koshy, Konnath Chacko

2013-01-01

Grasses are traditionally considered as wind pollinated, however, field observations confirmed frequent insect visits to grass flowers, suggesting insect pollination. Fruit and seed predators inflict heavy losses to cereals and millets during their growth, maturation and storage. The actual factors guiding insects and predators to grass flowers, fruits and seeds are not clear. Here, we report attractive blue fluorescence emissions on grass floral parts such as glumes, lemma, palea, lodicules, staminal filaments, pollens and fruits in ultraviolet (UV) 366 nm, whereas the stigmatic portions were not blue, but red fluorescent. We characterized the blue fluorescent constituent in grass reproductive structures as ferulic acid (FA). Fluorescence spectra of blue-emitting grass floral, seed extracts and isolated FA on excitation at 366 nm showed their emissions at 420–460 nm. We propose these FA-based blue fluorescence emissions in grass reproductive structures as visual cues that attract pollinators, predators and even pests towards them. PMID:24061408

Research on screening of suitable forage grasses in coastal saline - alkaline soil

NASA Astrophysics Data System (ADS)

Yue, Xiaoyu; Han, Xin; Song, Qianhong; Yang, Xu; Zhou, Qingyun

2017-11-01

The screening of salt-tolerant plants can provide suitable tree species for the afforestation of coastal salinity and maintain biodiversity and ecological stability. The research was based on the study of seven grasses, such as high fescue, the bermuda grass, the thyme, the rye grass, the precocious grass, the third leaf, and the red three leaves. Each pasture was planted in three different kinds of soil, such as salt alkali soil, salt alkali soil + ecological bag and non-saline alkali soil. The effect of salt alkali soil on germinating time, germination rate and grass growth was analyzed. The effects of ecological bag on soil salt and the growth and germination of grass was also analyzed in order to provide the reference basis for the widespread and systematic selection of salt-tolerant plants, with the grass being selected for the suitable ecological bag.

Evaluation of six candidate DNA barcode loci for identification of five important invasive grasses in eastern Australia

PubMed Central

Wang, Aisuo; Gopurenko, David; Wu, Hanwen; Lepschi, Brendan

2017-01-01

Invasive grass weeds reduce farm productivity, threaten biodiversity, and increase weed control costs. Identification of invasive grasses from native grasses has generally relied on the morphological examination of grass floral material. DNA barcoding may provide an alternative means to identify co-occurring native and invasive grasses, particularly during early growth stages when floral characters are unavailable for analysis. However, there are no universal loci available for grass barcoding. We herein evaluated the utility of six candidate loci (atpF intron, matK, ndhK-ndhC, psbE—petL, ETS and ITS) for barcode identification of several economically important invasive grass species frequently found among native grasses in eastern Australia. We evaluated these loci in 66 specimens representing five invasive grass species (Chloris gayana, Eragrostis curvula, Hyparrhenia hirta, Nassella neesiana, Nassella trichotoma) and seven native grass species. Our results indicated that, while no single locus can be universally used as a DNA barcode for distinguishing the grass species examined in this study, two plastid loci (atpF and matK) showed good distinguishing power to separate most of the taxa examined, and could be used as a dual locus to distinguish several of the invasive from the native species. Low PCR success rates were evidenced among two nuclear loci (ETS and ITS), and few species were amplified at these loci, however ETS was able to genetically distinguish the two important invasive Nassella species. Multiple loci analyses also suggested that ETS played a crucial role in allowing identification of the two Nassella species in the multiple loci combinations. PMID:28399170

Evaluation of six candidate DNA barcode loci for identification of five important invasive grasses in eastern Australia.

PubMed

Wang, Aisuo; Gopurenko, David; Wu, Hanwen; Lepschi, Brendan

2017-01-01

Invasive grass weeds reduce farm productivity, threaten biodiversity, and increase weed control costs. Identification of invasive grasses from native grasses has generally relied on the morphological examination of grass floral material. DNA barcoding may provide an alternative means to identify co-occurring native and invasive grasses, particularly during early growth stages when floral characters are unavailable for analysis. However, there are no universal loci available for grass barcoding. We herein evaluated the utility of six candidate loci (atpF intron, matK, ndhK-ndhC, psbE-petL, ETS and ITS) for barcode identification of several economically important invasive grass species frequently found among native grasses in eastern Australia. We evaluated these loci in 66 specimens representing five invasive grass species (Chloris gayana, Eragrostis curvula, Hyparrhenia hirta, Nassella neesiana, Nassella trichotoma) and seven native grass species. Our results indicated that, while no single locus can be universally used as a DNA barcode for distinguishing the grass species examined in this study, two plastid loci (atpF and matK) showed good distinguishing power to separate most of the taxa examined, and could be used as a dual locus to distinguish several of the invasive from the native species. Low PCR success rates were evidenced among two nuclear loci (ETS and ITS), and few species were amplified at these loci, however ETS was able to genetically distinguish the two important invasive Nassella species. Multiple loci analyses also suggested that ETS played a crucial role in allowing identification of the two Nassella species in the multiple loci combinations.

Exploring the spatio-temporal relationship between two key aeroallergens and meteorological variables in the United Kingdom

NASA Astrophysics Data System (ADS)

Khwarahm, Nabaz; Dash, Jadunandan; Atkinson, Peter M.; Newnham, R. M.; Skjøth, C. A.; Adams-Groom, B.; Caulton, Eric; Head, K.

2014-05-01

Constructing accurate predictive models for grass and birch pollen in the air, the two most important aeroallergens, for areas with variable climate conditions such as the United Kingdom, require better understanding of the relationships between pollen count in the air and meteorological variables. Variations in daily birch and grass pollen counts and their relationship with daily meteorological variables were investigated for nine pollen monitoring sites for the period 2000-2010 in the United Kingdom. An active pollen count sampling method was employed at each of the monitoring stations to sample pollen from the atmosphere. The mechanism of this method is based on the volumetric spore traps of Hirst design (Hirst in Ann Appl Biol 39(2):257-265, 1952). The pollen season (start date, finish date) for grass and birch were determined using a first derivative method. Meteorological variables such as daily rainfall; maximum, minimum and average temperatures; cumulative sum of Sunshine duration; wind speed; and relative humidity were related to the grass and birch pollen counts for the pre-peak, post peak and the entire pollen season. The meteorological variables were correlated with the pollen count data for the following temporal supports: same-day, 1-day prior, 1-day mean prior, 3-day mean prior, 7-day mean prior. The direction of influence (positive/negative) of meteorological variables on pollen count varied for birch and grass, and also varied when the pollen season was treated as a whole season, or was segmented into the pre-peak and post-peak seasons. Maximum temperature, sunshine duration and rainfall were the most important variables influencing the count of grass pollen in the atmosphere. Both maximum temperature (pre-peak) and sunshine produced a strong positive correlation, and rain produced a strong negative correlation with grass pollen count in the air. Similarly, average temperature, wind speed and rainfall were the most important variables influencing the count of birch pollen in the air. Both wind speed and rain produced a negative correlation with birch pollen count in the air and average temperature produced a positive correlation.

Exchangeable lead from prediction models relates to vetiver lead uptake in different soil types.

PubMed

Andra, Syam S; Sarkar, Dibyendu; Saminathan, Sumathi K M; Datta, Rupali

2011-12-01

Prediction models for exchangeable soil lead, published earlier in this journal (Andra et al. 2010a), were developed using a suite of native lead (Pb) paint-contaminated residential soils from two US cities heavily populated with homes constructed prior to Pb ban in paints. In this study, we tested the feasibility and practical applications of these prediction models for developing a phytoremediation design using vetiver grass (Vetiveria zizanioides), a Pb-tolerant plant. The models were used to estimate the exchangeable fraction of Pb available for vetiver uptake in four lead-spiked soil types, both acidic and alkaline, with varying physico-chemical properties and that are different from those used to build the prediction models. Results indicate a strong correlation for predictable exchangeable Pb with the observed fraction and as well with total Pb accumulated by vetiver grass grown in these soils. The correlation coefficient for the predicted vs. observed exchangeable Pb with p < 0.001 was 0.999, 0.996, 0.949, and 0.998 in the Immokalee, Millhopper, Pahokee Muck, and Tobosa soil type, respectively. Similarly, the correlation coefficient for the predicted exchangeable Pb vs. accumulated Pb in vetiver grass with p < 0.001 was 0.948, 0.983, 0.929, and 0.969 for each soil type, respectively. This study suggests that the success of a phytoremediation design could be assessed upfront by predicting the exchangeable Pb fraction in a given soil type based on its properties. This helps in modifying the soil conditions to enhance phytoextraction of Pb from contaminated soils.

40 CFR 180.582 - Pyraclostrobin; tolerances for residues.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 2.5 Gold of pleasure, seed 0.45 Grain, aspirated fractions 2.5 Grape 2.0 Grape, raisin 7.0 Grass, forage 10 Grass, hay 4.5 Grass, seed screenings 27 Grass, straw grown for seed 14 Hare's ear mustard...

40 CFR 180.454 - Nicosulfuron; tolerances for residues.

Code of Federal Regulations, 2010 CFR

2010-07-01

... byproducts 0.05 Grass, forage 9.0 Grass, hay 25.0 Horse, fat 0.01 Horse, meat 0.01 Horse, meat byproducts 0... grass, forage 10 12/31/11 Bermuda grass, hay 25 12/31/11 (c) Tolerances with regional registrations...

40 CFR 180.454 - Nicosulfuron; tolerances for residues.

Code of Federal Regulations, 2011 CFR

2011-07-01

... byproducts 0.05 Grass, forage 9.0 Grass, hay 25.0 Horse, fat 0.01 Horse, meat 0.01 Horse, meat byproducts 0... grass, forage 10 12/31/11 Bermuda grass, hay 25 12/31/11 (c) Tolerances with regional registrations...

Overlap in nitrogen sources and redistribution of nitrogen between trees and grasses in a semi-arid savanna.

PubMed

Priyadarshini, K V R; Prins, Herbert H T; de Bie, Steven; Heitkönig, Ignas M A; Woodborne, Stephan; Gort, Gerrit; Kirkman, Kevin; Fry, Brian; de Kroon, Hans

2014-04-01

A key question in savanna ecology is how trees and grasses coexist under N limitation. We used N stable isotopes and N content to study N source partitioning across seasons from trees and associated grasses in a semi-arid savanna. We also used (15)N tracer additions to investigate possible redistribution of N by trees to grasses. Foliar stable N isotope ratio (δ(15)N) values were consistent with trees and grasses using mycorrhiza-supplied N in all seasons except in the wet season when they switched to microbially fixed N. The dependence of trees and grasses on mineralized soil N seemed highly unlikely based on seasonal variation in mineralization rates in the Kruger Park region. Remarkably, foliar δ(15)N values were similar for all three tree species differing in the potential for N fixation through nodulation. The tracer experiment showed that N was redistributed by trees to understory grasses in all seasons. Our results suggest that the redistribution of N from trees to grasses and uptake of N was independent of water redistribution. Although there is overlap of N sources between trees and grasses, dependence on biological sources of N coupled with redistribution of subsoil N by trees may contribute to the coexistence of trees and grasses in semi-arid savannas.

Variation in Soil Microbial Community Structure Associated with Different Legume Species Is Greater than that Associated with Different Grass Species

PubMed Central

Zhou, Yang; Zhu, Honghui; Fu, Shenglei; Yao, Qing

2017-01-01

Plants are the essential factors shaping soil microbial community (SMC) structure. When most studies focus on the difference in the SMC structure associated different plant species, the variation in the SMC structure associated with phylogenetically close species is less investigated. Legume (Fabaceae) and grass (Poaceae) are functionally important plant groups; however, their influences on the SMC structure are seldom compared, and the variation in the SMC structure among legume or grass species is largely unknown. In this study, we grew three legume species vs. three grass species in mesocosms, and monitored the soil chemical property, quantified the abundance of bacteria and fungi. The SMC structure was also characterized using PCR-DGGE and Miseq sequencing. Results showed that legume and grass differentially affected soil pH, dissolved organic C, total N content, and available P content, and that legume enriched fungi more greatly than grass. Both DGGE profiling and Miseq-sequencing indicated that the bacterial diversity associated with legume was higher than that associated with grass. When legume increased the abundance of Verrucomicrobia, grass decreased it, and furthermore, linear discriminant analysis identified some group-specific microbial taxa as potential biomarkers of legume or grass. These data suggest that legume and grass differentially select for the SMC. More importantly, clustering analysis based on both DGGE profiling and Miseq-sequencing demonstrated that the variation in the SMC structure associated with three legume species was greater than that associated with three grass species. PMID:28620371

Blue wild-rye grass competition increases the effect of ozone on ponderosa pine seedlings.

PubMed

Andersen, C P; Hogsett, W E; Plocher, M; Rodecap, K; Lee, E H

2001-03-01

Individual ponderosa pine (Pinus ponderosa Dougl. ex Laws.) seedlings were grown in mesocosms with three densities of blue wild-rye grass (Elymus glaucus Buckl.) (equivalent to 0, 32 or 88 plants m-2) to determine if the presence of a natural competitor alters the response of ponderosa pine seedlings to ozone. After 3 years of ozone exposure, grass presence reduced total ponderosa pine dry mass by nearly 50%, whereas ozone alone had no significant effect on ponderosa pine growth. The combination of ozone and grass further reduced needle, stem and branch dry mass significantly below that induced by grass competition alone. Root:shoot ratios increased in response to the combined grass and ozone treatments. Grass competition significantly reduced soluble sugar concentrations in all ponderosa pine tissue components examined. Starch concentrations were highly variable but did not differ significantly between treatments. Ozone significantly reduced soluble sugar concentrations in fine roots and stems. In the absence of grass, ozone-treated seedlings tended to have higher tissue N concentrations than controls. In the presence of grass, ozone-treated seedlings had lower N concentrations than controls, resulting in a significant interaction between these two stresses in 1- and 2-year-old needles. Needle C:N ratios decreased in response to grass competition, as a result of increased N concentration and no change in C concentration. The opposite response was observed in ozone-treated seedlings as a result of decreased N concentrations, indicating that ozone-treated seedlings were unable to take up or retain as much nitrogen when grown in the presence of grass. We conclude that ponderosa pine seedlings are more susceptible to ozone when grown in competition with blue wild-rye grass.

Gravity perception and asymmetric growth in plants - A model derived from the grass pulvinus

NASA Technical Reports Server (NTRS)

Dayanandan, P.; Franklin, C. I.; Kaufman, P. B.

1982-01-01

It is pointed out that gravitropic responses in plants involve asymmetric growth. On the basis of the geometry of growth response in grass leaf sheath pulvinus, a general model is proposed for gravitropism in multicellular plant organs. The negative gravitropic response of a pulvinus is a result of cell elongation involving all but the uppermost region of a horizontally placed organ. Whereas the uppermost region does not grow, the lowermost region elongates maximally. The regions between elongate to intermediate extents. An expression is given relating the angle of curvature of the organ to the diameter and initial and final lengths of the organ. It is shown that the response of the individual cells can be expressed as inherent sensitivity to gravitational stimulus according to a particular equation.

Pollen loads and allergic rhinitis in Darwin, Australia: a potential health outcome of the grass-fire cycle.

PubMed

Johnston, Fay H; Hanigan, Ivan C; Bowman, David M J S

2009-03-01

Although the prevalence of asthma and allergic rhinitis has been increasing in tropical regions, little is known about the allergenicity of pollens from tropical plant families or the importance of ongoing environmental changes. We investigated associations between daily average pollen counts of several tropical plant families and sales of medications for the treatment of allergic rhinitis in Darwin, Australia-a tropical setting in which grass abundance has increased due to increased fire frequencies and the introduction of African pasture grasses. Daily pollen counts with detailed identification of plant species were undertaken in conjunction with a weekly survey of flowering plant species from April 2004 to November 2005. Five pharmacies provided daily sales data of selected medications commonly used to treat allergic rhinitis. We used generalized linear modeling to examine outcomes. All analyses accounted for the potential confounding effects of time trends, holidays, respiratory viral illnesses, meteorological conditions, and air pollution. The peak total pollen count was 94 grains/m(3). Despite the low levels of Poaceae (grass) pollen (maximum daily count, 24 grains/m(3)), there was a clear association with daily sales of anti-allergic medications greatest at a lag of 1 day. Sales increased by 5% with an interquartile range rise (3 grain/m(3)) in Poaceae pollen (5.07%, 95%CI 1.04%, 9.25%). No associations were observed with pollen from other plant families. Although further testing is required, we suggest that an overlooked aspect of the "grass-fire cycle" that is degrading many tropical landscapes, could be an increase in the prevalence of allergic rhinitis.

Determination of ranges for reporting pollen aeroallergen levels in the Washington, DC, metropolitan area.

PubMed

Kosisky, Susan E; Marks, Mariko S; Yacovone, Margaret A; Nelson, Michael R

2011-09-01

Local aeroallergen monitoring provides useful information for the atopic patient and medical community. Currently, National Allergy Bureau (NAB) ranges are used for reporting pollen count levels in the Washington, DC, area. To determine standard range criteria (low, moderate, high, and very high) for the reporting of specific tree, grass, and weed aeroallergens representative of the Washington, DC, metropolitan region. Atmospheric sampling for pollen aeroallergens was performed using a volumetric rotating-arm impaction sampler (model 40 Rotorod, SDI Company, Plymouth Meeting, PA). The cumulative pollen count, over a 12-year period (1998-2009), was determined for specific pollen aeroallergens. Local ranges were developed using methodology previously employed to determine NAB ranges. A comparison was made between NAB and Washington, DC, area ranges. The local median count, and low and moderate range criteria, are markedly lower than NAB range counts for tree, grass, and weed pollen. The NAB 99th percentile (high) count is significantly higher for grass and weed pollen but lower for tree pollen. Using new local range criteria, an increase was seen in the number of high days recorded for weed pollen (1,300%), grass pollen (258.6%), and tree pollen (11.8%). Previously, using NAB range criteria, no very high days were reported for grass and weed pollen over the 12-year period. Washington, DC, ranges establish more relevant reporting standards for our local patient population and will allow for comparison with reporting levels developed for sampling locations nationwide as well as with other regional sites. Copyright © 2011 American College of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

Impacts of savanna trees on forage quality for a large African herbivore

PubMed Central

De Kroon, Hans; Prins, Herbert H. T.

2008-01-01

Recently, cover of large trees in African savannas has rapidly declined due to elephant pressure, frequent fires and charcoal production. The reduction in large trees could have consequences for large herbivores through a change in forage quality. In Tarangire National Park, in Northern Tanzania, we studied the impact of large savanna trees on forage quality for wildebeest by collecting samples of dominant grass species in open grassland and under and around large Acacia tortilis trees. Grasses growing under trees had a much higher forage quality than grasses from the open field indicated by a more favourable leaf/stem ratio and higher protein and lower fibre concentrations. Analysing the grass leaf data with a linear programming model indicated that large savanna trees could be essential for the survival of wildebeest, the dominant herbivore in Tarangire. Due to the high fibre content and low nutrient and protein concentrations of grasses from the open field, maximum fibre intake is reached before nutrient requirements are satisfied. All requirements can only be satisfied by combining forage from open grassland with either forage from under or around tree canopies. Forage quality was also higher around dead trees than in the open field. So forage quality does not reduce immediately after trees die which explains why negative effects of reduced tree numbers probably go initially unnoticed. In conclusion our results suggest that continued destruction of large trees could affect future numbers of large herbivores in African savannas and better protection of large trees is probably necessary to sustain high animal densities in these ecosystems. PMID:18309522

Genetic resources for maize cell wall biology.

PubMed

Penning, Bryan W; Hunter, Charles T; Tayengwa, Reuben; Eveland, Andrea L; Dugard, Christopher K; Olek, Anna T; Vermerris, Wilfred; Koch, Karen E; McCarty, Donald R; Davis, Mark F; Thomas, Steven R; McCann, Maureen C; Carpita, Nicholas C

2009-12-01

Grass species represent a major source of food, feed, and fiber crops and potential feedstocks for biofuel production. Most of the biomass is contributed by cell walls that are distinct in composition from all other flowering plants. Identifying cell wall-related genes and their functions underpins a fundamental understanding of growth and development in these species. Toward this goal, we are building a knowledge base of the maize (Zea mays) genes involved in cell wall biology, their expression profiles, and the phenotypic consequences of mutation. Over 750 maize genes were annotated and assembled into gene families predicted to function in cell wall biogenesis. Comparative genomics of maize, rice (Oryza sativa), and Arabidopsis (Arabidopsis thaliana) sequences reveal differences in gene family structure between grass species and a reference eudicot species. Analysis of transcript profile data for cell wall genes in developing maize ovaries revealed that expression within families differed by up to 100-fold. When transcriptional analyses of developing ovaries before pollination from Arabidopsis, rice, and maize were contrasted, distinct sets of cell wall genes were expressed in grasses. These differences in gene family structure and expression between Arabidopsis and the grasses underscore the requirement for a grass-specific genetic model for functional analyses. A UniformMu population proved to be an important resource in both forward- and reverse-genetics approaches to identify hundreds of mutants in cell wall genes. A forward screen of field-grown lines by near-infrared spectroscopic screen of mature leaves yielded several dozen lines with heritable spectroscopic phenotypes. Pyrolysis-molecular beam mass spectrometry confirmed that several nir mutants had altered carbohydrate-lignin compositions.

Climate change: consequences on the pollination of grasses in Perugia (Central Italy). A 33-year-long study.

PubMed

Sofia, Ghitarrini; Emma, Tedeschini; Veronica, Timorato; Giuseppe, Frenguelli

2017-01-01

Many works carried out in the last decades have shown that the pollen season for taxa flowering in winter and spring, in temperate regions, has tended to be earlier, probably due to the continuous rise in temperature. The mean annual temperature in Perugia, Central Italy, was about 0.5 °C higher in the last three decades compared with that registered from 1952 to 1981. The increase of temperature took place mainly in winter and spring, while no significant variation was recorded during the summer and autumn. This scenario shows variations in the timing and behavior of flowering of many spontaneous plants such as grasses, whose phenology is strongly influenced by air temperature. This work reports fluctuations in the airborne grass pollen presence in Perugia over a 33-year period (1982-2014), in order to study the influence of the warming registered in recent years on the behavior of pollen release of this taxon. The grass pollen season in Perugia typically lasts from the beginning of May to late July. The start dates showed a marked trend to an earlier beginning of the season (-0.4 day/year), as well as a strong correlation with the average temperatures of March and April. The peak is reached around 30th May, but the annual pollen index (API) is following a decreasing trend. The correlation between starting dates and spring temperatures could be interesting for the constitution of a forecasting model capable of predicting the presence of airborne grass pollen, helping to plan therapies for allergic people.

40 CFR 60.3078 - What definitions must I know?

Code of Federal Regulations, 2010 CFR

2010-07-01

... shavings. Wood waste does not include: (1) Grass, grass clippings, bushes, shrubs, and clippings from bushes and shrubs from residential, commercial/retail, institutional, or industrial sources as part of..., flake board, and oriented strand board). Yard waste means grass, grass clippings, bushes, shrubs, and...

40 CFR 60.2977 - What definitions must I know?

Code of Federal Regulations, 2010 CFR

2010-07-01

... shavings. Wood waste does not include: (1) Grass, grass clippings, bushes, shrubs, and clippings from bushes and shrubs from residential, commercial/retail, institutional, or industrial sources as part of..., flake board, and oriented strand board). Yard waste means grass, grass clippings, bushes, shrubs, and...

40 CFR 180.464 - Dimethenamid; tolerances for residues.

Code of Federal Regulations, 2010 CFR

2010-07-01

... removed 0.01 Corn, sweet, stover 0.01 Garlic 0.01 Grass, forage 0.15 Grass, hay 2.5 Grass, seed screenings 0.01 Grass, straw 0.01 Hop, dried cones 0.05 Horseradish 0.01 Leek 0.01 Onion, bulb 0.01 Onion...

7 CFR 1436.3 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... security interest in personal property when properly filed or recorded. Hay means a grass or legume that has been cut and stored. Commonly used grass mixtures include rye grass, timothy, brome, fescue, coastal Bermuda, orchard grass, and other native species, depending on the region. Forage legumes include...

7 CFR 1436.3 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... security interest in personal property when properly filed or recorded. Hay means a grass or legume that has been cut and stored. Commonly used grass mixtures include rye grass, timothy, brome, fescue, coastal Bermuda, orchard grass, and other native species, depending on the region. Forage legumes include...

40 CFR 180.464 - Dimethenamid; tolerances for residues.

Code of Federal Regulations, 2011 CFR

2011-07-01

... removed 0.01 Corn, sweet, stover 0.01 Garlic 0.01 Grass, forage 0.15 Grass, hay 2.5 Grass, seed screenings 0.01 Grass, straw 0.01 Hop, dried cones 0.05 Horseradish 0.01 Leek 0.01 Onion, bulb 0.01 Onion...

Best management practices for establishment of salt-tolerant grasses on roadsides : final report.

DOT National Transportation Integrated Search

2017-07-01

Roadsides are a unique growing environment for turf grasses and can be a challenge to establish and maintain. The University of Minnesota turf grass research program has been investigating low-input turf grasses that are better adapted for roadsides ...

Microbiological Quality of Panicum maximum Grass Silage with Addition of Lactobacillus sp. as Starter

NASA Astrophysics Data System (ADS)

Sumarsih, S.; Sulistiyanto, B.; Utama, C. S.

2018-02-01

The aim of the research was to evaluate microbiological quality of Panicum maximum grass silage with addition Lactobacillus sp as starter. The completely randomized design was been used on this research with 4 treaments and 3 replications. The treatments were P0 ( Panicum maximum grass silage without addition Lactobacillus sp ), P1 ( Panicum maximum grass silage with 2% addition Lactobacillus sp), P2 (Panicum maximum grass silage with 4% addition Lactobacillus sp) and P3 (Panicum maximum grass silage with 6% addition Lactobacillus sp).The parameters were microbial populations of Panicum maximum grass silage (total lactic acid bacteria, total bacteria, total fungi, and Coliform bacteria. The data obtained were analyzed variance (ANOVA) and further tests performed Duncan’s Multiple Areas. The population of lactic acid bacteria was higher (P<0.05) and the total bacteria, fungi and Coliform were lower (P<0.05) with addition Lactobacillus sp. Microbiological quality of Panicum maximum grass silage with addition Lactobacillus sp was better than no addition Lactobacillus sp.

Does plant diversity affect the water balance of established grassland systems?

NASA Astrophysics Data System (ADS)

Leimer, Sophia; Bischoff, Sebastian; Blaser, Stefan; Boch, Steffen; Busch, Verena; Escher, Peter; Fischer, Markus; Kaupenjohann, Martin; Kerber, Katja; Klaus, Valentin; Michalzik, Beate; Prati, Daniel; Schäfer, Deborah; Schmitt, Barbara; Schöning, Ingo; Schwarz, Martin T.; Siemens, Jan; Thieme, Lisa; Wilcke, Wolfgang

2017-04-01

The water cycle drives nutrient cycles and plant productivity. The impact of land use on the water cycle has been extensively studied and there is experimental evidence that biodiversity modifies the water cycle in grasslands. However, the combined influences of land-use and associated biodiversity on the water cycle in established land-use systems are unclear. Therefore, we investigated how evapotranspiration (ETa), downward water flux (DF), and capillary rise (CR) in topsoil and subsoil are related to land-use and plant diversity in established, commercially managed grassland and compared these results to findings from experiments where plant diversity was manipulated. In three Central European regions ("Biodiversity Exploratories"), we studied 29 grassland plots (50 m x 50 m; 9-11 plots per region) from 2010 to 2015. The land-use types cover pasture, mown pasture, and meadow in at least triplicate per region. On each plot, we measured soil water contents, meteorological data (hourly resolution), cumulative precipitation (biweekly), plant species richness, the number of plants in the functional groups of grasses, herbs, and legumes (annually), and root biomass (once). Potential evapotranspiration (ETp) was calculated from meteorological data per plot. Missing data points of ETp and soil water contents were estimated with Bayesian hierarchical models. ETa, DF, and CR were calculated for two soil layers with a soil water balance model. The model is based on changes in soil water storage between subsequent observation dates and ETp, which was partitioned between soil layers according to root distribution. Water fluxes in annual resolution were statistically analyzed for land-use and biodiversity effects using repeated-measures analysis of variance (ANOVA). Land-use type did not affect water fluxes. Species richness did not influence DF and CR. DF from topsoil was higher on plots with more grass species, which is opposite to the results from a manipulative biodiversity experiment. The number of grasses and herbs influenced CR into topsoil. ETa from topsoil decreased with increasing species richness while ETa from subsoil increased. Opposing effects on ETa in the two soil layers were also observed for the numbers of herb and legume species. In manipulative biodiversity experiments, opposing effects on ETa from different soil layers are explained by higher plant cover and biomass in species-rich mixtures, reducing evaporation by shading of the topsoil, and deeper roots in species-rich mixtures, facilitating water use and increasing transpiration from subsoil. In our study, biomass decreased with increasing species richness because fertilizer application increased biomass production and decreased species richness. Plots with more grasses showed lower ETa from topsoil than plots with less grasses. However, the within-subject effects indicated higher ETa from topsoil in years with more grasses on individual plots than in years with less grasses. The latter finding complies with the results from a manipulative biodiversity experiment, which has homogeneous soil properties and management. The opposite between-subject effect is probably caused by variations in environmental conditions between plots. This indicates that processes controlling the biodiversity-water cycle relationship vary in real-world systems with environmental conditions, which are largely controlled for in manipulative biodiversity experiments.

Temperature responses of Rubisco from Paniceae grasses provide opportunities for improving C3 photosynthesis.

PubMed

Sharwood, Robert E; Ghannoum, Oula; Kapralov, Maxim V; Gunn, Laura H; Whitney, Spencer M

2016-11-28

Enhancing the catalytic properties of the CO 2 -fixing enzyme Rubisco is a target for improving agricultural crop productivity. Here, we reveal extensive diversity in the kinetic response between 10 and 37 °C by Rubisco from C 3 and C 4 species within the grass tribe Paniceae. The CO 2 fixation rate (kcatc) for Rubisco from the C 4 grasses with nicotinamide adenine dinucleotide (NAD) phosphate malic enzyme (NADP-ME) and phosphoenolpyruvate carboxykinase (PCK) photosynthetic pathways was twofold greater than the kcatc of Rubisco from NAD-ME species across all temperatures. The declining response of CO 2 /O 2 specificity with increasing temperature was less pronounced for PCK and NADP-ME Rubisco, which would be advantageous in warmer climates relative to the NAD-ME grasses. Modelled variation in the temperature kinetics of Paniceae C 3 Rubisco and PCK Rubisco differentially stimulated C 3 photosynthesis relative to tobacco above and below 25 °C under current and elevated CO 2 . Amino acid substitutions in the large subunit that could account for the catalytic variation among Paniceae Rubisco are identified; however, incompatibilities with Paniceae Rubisco biogenesis in tobacco hindered their mutagenic testing by chloroplast transformation. Circumventing these bioengineering limitations is critical to tailoring the properties of crop Rubisco to suit future climates.

Differences in response of two model estuarine crustaceans after lethal and sublethal exposures to chlorpyrifos.

PubMed

Key, Peter B; Simonik, Elizabeth; Kish, Nicole; Chung, Katy W; Fulton, Michael H

2013-01-01

This study assessed the in vitro and in vivo effects of an acetylcholinesterase enzyme inhibitor (chlorpyrifos) in two estuarine crustaceans: grass shrimp (Palaemonetes pugio) and mysid (Americamysis bahia). The differences in response were quantified after lethal and sublethal exposures to chlorpyrifos and in vitro assays with chlorpyrifos-oxon. Results from the in vitro experiments indicated that the target enzyme, acetylcholinesterase (AChE), in the two species was similar in sensitivity to chlorpyrifos inhibition with IC50s of 0.98 nM and 0.89 nM for grass shrimp and mysids, respectively. In vivo experiments showed that mysids were significantly more sensitive to chlorpyrifos-induced AChE inhibition after 24 h of exposure. The in vivo EC50s for AChE inhibition were 1.23 μg L(-1) for grass shrimp and 0.027 μg L(-1) for mysids. Median lethal concentrations (24h LC50 values) were 1.06 μg L(-1) for grass shrimp and 0.068 μg L(-1) for mysids. The results suggest that differences in the response of these two crustaceans are likely related to differences in uptake and metabolism rather than target site sensitivity.

Phleum pratense pollen starch granules induce humoral and cell-mediated immune responses in a rat model of allergy.

PubMed

Motta, A; Peltre, G; Dormans, J A M A; Withagen, C E T; Lacroix, G; Bois, F; Steerenberg, P A

2004-02-01

Timothy grass (Phleum pratense) pollen allergens are an important cause of allergic symptoms. However, pollen grains are too large to penetrate the deeper airways. Grass pollen is known to release allergen-bearing starch granules (SG) upon contact with water. These granules can create an inhalable allergenic aerosol capable of triggering an early asthmatic response and are implicated in thunderstorm-associated asthma. We studied the humoral (IgE) and bronchial lymph node cells reactivities to SG from timothy grass pollen in pollen-sensitized rats. Brown-Norway rats were sensitized (day 0) and challenged (day 21) intratracheally with intact pollen and kept immunized by pollen intranasal instillation by 4 weeks intervals during 3 months. Blood and bronchial lymph nodes were collected 7 days after the last intranasal challenge. SG were purified from fresh timothy grass pollen using 5 microm mesh filters. To determine the humoral response (IgE) to SG, we developed an original ELISA inhibition test, based on competition between pollen allergens and purified SG. The cell-mediated response to SG in the bronchial lymph node cells was determined by measuring the uptake of [3H]thymidine in a proliferation assay. An antibody response to SG was induced, and purified SG were able to inhibit the IgE ELISA absorbance by 45%. Pollen extract and intact pollen gave inhibitions of 55% and 52%, respectively. A cell-mediated response was also found, as pollen extract, intact pollen and SG triggered proliferation of bronchial lymph node cells. It was confirmed that timothy grass pollen contains allergen-loaded SG, which are released upon contact with water. These granules were shown to be recognized by pollen-sensitized rats sera and to trigger lymph node cell proliferation in these rats. These data provide new arguments supporting the implication of grass pollen SG in allergic asthma.

Heat Shock Proteins in Association with Heat Tolerance in Grasses

PubMed Central

Xu, Yan; Zhan, Chenyang; Huang, Bingru

2011-01-01

The grass family Poaceae includes annual species cultivated as major grain crops and perennial species cultivated as forage or turf grasses. Heat stress is a primary factor limiting growth and productivity of cool-season grass species and is becoming a more significant problem in the context of global warming. Plants have developed various mechanisms in heat-stress adaptation, including changes in protein metabolism such as the induction of heat shock proteins (HSPs). This paper summarizes the structure and function of major HSPs, recent research progress on the association of HSPs with grass tolerance to heat stress, and incorporation of HSPs in heat-tolerant grass breeding. PMID:22084689

Estimation of the Botanical Composition of Clover-Grass Leys from RGB Images Using Data Simulation and Fully Convolutional Neural Networks

PubMed Central

Steen, Kim Arild; Green, Ole; Karstoft, Henrik

2017-01-01

Optimal fertilization of clover-grass fields relies on knowledge of the clover and grass fractions. This study shows how knowledge can be obtained by analyzing images collected in fields automatically. A fully convolutional neural network was trained to create a pixel-wise classification of clover, grass, and weeds in red, green, and blue (RGB) images of clover-grass mixtures. The estimated clover fractions of the dry matter from the images were found to be highly correlated with the real clover fractions of the dry matter, making this a cheap and non-destructive way of monitoring clover-grass fields. The network was trained solely on simulated top-down images of clover-grass fields. This enables the network to distinguish clover, grass, and weed pixels in real images. The use of simulated images for training reduces the manual labor to a few hours, as compared to more than 3000 h when all the real images are annotated for training. The network was tested on images with varied clover/grass ratios and achieved an overall pixel classification accuracy of 83.4%, while estimating the dry matter clover fraction with a standard deviation of 7.8%. PMID:29258215

Modelling mono-digestion of grass silage in a 2-stage CSTR anaerobic digester using ADM1.

PubMed

Thamsiriroj, T; Murphy, J D

2011-01-01

This paper examines 174 days of experimental data and modelling of mono-digestion of grass silage in a two stage wet process with recirculation of liquor; the two vessels have an effective volume of 312 L each. The organic loading rate is initiated at 0.5 kg VS m(-3) d(-1) (first 74 days) and subsequently increased to 1 kg VS m(-3) d(-1). The experimental data was used to generate a mathematical model (ADM1) which was calibrated over the first 74 days of operation. Good accuracy with experimental data was found for the subsequent 100 days. Results of the model would suggest starting the process without recirculation and thus building up the solids content of the liquor. As the level of VFA increases, recirculation should be employed to control VFA. Recirculation also controls solids content and pH. Methane production was estimated at 88% of maximum theoretical production. Copyright © 2010 Elsevier Ltd. All rights reserved.

Isotopic signatures of vegetation change on northern mixed grass prairie

USDA-ARS?s Scientific Manuscript database

National analyses have shown invasion of northern mixed-grass prairie by nonnative grasses such as Kentucky bluegrass (Poa pratensis L.). Invasion of native prairie by nonnative grasses may compromise ecosystem function and limit potential ecosystem services. Recent data from a long-term (100 year) ...

75 FR 66781 - Habitat Conservation Plan for Pacific Gas & Electric Company's Operation, Maintenance, and Minor...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-10-29

... Dunes evening-primrose E Oenotherawolfii Wolf's evening-primrose -- Orcuttiapilosa Hairy orcutt grass E Orcuttiatenuis Slender orcutt grass T Orcuttiaviscida Sacramento orcutt grass E Packeralayneae Layne's ragwort T... Monterey pine -- Piperiayadonii Yadon's rein orchid E Pleuropogonhooverianus North Coast semaphore grass...

Evaluating the Capability of Grass Swale for the Rainfall Runoff Reduction from an Urban Parking Lot, Seoul, Korea

PubMed Central

Shafique, Muhammad; Kim, Reeho; Kyung-Ho, Kwon

2018-01-01

This field study elaborates the role of grass swale in the management of stormwater in an urban parking lot. Grass swale was constructed by using different vegetations and local soil media in the parking lot of Mapu-gu Seoul, Korea. In this study, rainfall runoff was first retained in soil and the vegetation layers of the grass swale, and then infiltrated rainwater was collected with the help of underground perforated pipe, and passed to an underground storage trench. In this way, grass swale detained a large amount of rainwater for a longer period of time and delayed peak discharge. In this field study, various real storm events were monitored and the research results were analyzed to evaluate the performance of grass swale for managing rainfall runoff in an urban area. From the analysis of field experiments, grass swale showed the significant rainfall runoff retention in different rain events. Grass swale markedly reduced total rainfall runoff volume and peak flow during the small storm events of intensity about 30 mm/h. From the analysis, on average rainfall runoff retention from the grass swale was found around 40 to 75% during the various small rain events. From the results, we can say that grass swale is a stormwater mitigation practice which can help avoid flash flooding problems in urban areas. PMID:29547567

Evaluating the Capability of Grass Swale for the Rainfall Runoff Reduction from an Urban Parking Lot, Seoul, Korea.

PubMed

Shafique, Muhammad; Kim, Reeho; Kyung-Ho, Kwon

2018-03-16

This field study elaborates the role of grass swale in the management of stormwater in an urban parking lot. Grass swale was constructed by using different vegetations and local soil media in the parking lot of Mapu-gu Seoul, Korea. In this study, rainfall runoff was first retained in soil and the vegetation layers of the grass swale, and then infiltrated rainwater was collected with the help of underground perforated pipe, and passed to an underground storage trench. In this way, grass swale detained a large amount of rainwater for a longer period of time and delayed peak discharge. In this field study, various real storm events were monitored and the research results were analyzed to evaluate the performance of grass swale for managing rainfall runoff in an urban area. From the analysis of field experiments, grass swale showed the significant rainfall runoff retention in different rain events. Grass swale markedly reduced total rainfall runoff volume and peak flow during the small storm events of intensity about 30 mm/h. From the analysis, on average rainfall runoff retention from the grass swale was found around 40 to 75% during the various small rain events. From the results, we can say that grass swale is a stormwater mitigation practice which can help avoid flash flooding problems in urban areas.

When did C4 Photosynthesis originate: New evidence from δ13C analysis of single grass-pollen grains

NASA Astrophysics Data System (ADS)

Urban, M. A.; Nelson, D. M.; Pearson, A.; Hu, F.

2009-12-01

C4 grasses account for >20% of global primary productivity and dominate tropical, subtropical, and warm-temperate grassland ecosystems. Thus it is vital to understand when and why C4 photosynthesis first evolved in the grass family (Poaceae). However, because of limitations of most proxies, the origin of C4 grasses remains ambiguous. Grass pollen is morphologically indistinct below the family level, making pollen analysis a crude instrument for studying C4-grass evolution. Previous studies have investigated the timing of C4 evolution using molecular tools and δ13C records from n-alkanes, ungulate teeth, and paleosols, but they yield disparate results. Molecular clocks suggest that C4 grasses first evolved between 27 and 36 Ma (million years before present), coincident with the Oligocene decline in pCO2 from >1000 to <500 ppm. In contrast, δ13C-based approaches do not detect the presence of C4 grasses until the middle Miocene, indicating that they were previously uncommon or absent on the landscape. To investigate when C4 photosynthesis first appeared in the grass family, we utilized Single Pollen Isotope Ratio AnaLysis (SPIRAL), a technique that reliably distinguishes C4 from C3 grass pollen via δ13C. We analyzed 837 single grains of grass pollen from eight lacustrine geological samples (~100 grains/sample) from France and Spain spanning the earliest Oligocene to middle Miocene. To distinguish C3/C4 ratios, we used an optimal threshold value of -19.2‰ adjusted for small (~1‰) temporal variations in atmospheric δ13C. Initial results provide unequivocal evidence of C4 grass pollen in all samples (24-57% C4 grass pollen ±9.2% on average) lending further credence to the molecular data, which posits that C4 grasses appeared as early as the Late Eocene, which is a plausible outcome when considering alternate schemes of dating phylogenetic trees. A C4 origin prior to pCO2 reaching its lowest levels of the Cenozoic at the Oligocene/Miocene boundary indicates that ecological or climatic factors played a pivotal role in the evolution of C4 grasses. However, our estimates for the timing of C4 evolution remain imprecise. We do not have SPIRAL data from samples older than ~34 Ma. Future analyzes will include well-dated samples from additional sites as old as the the late Paleocene, when grass pollen first appeared in the fossil record. In addition, we are refining the C3/C4 threshold value using grass pollen from herbarium specimens. New results should help pinpoint the timing of C4 evolution. Comparison of the timing of C4 evolution with independent pCO2, paleoclimate and paleoecological records will be used to assess the factor(s) that drove the evolution and eventual dominance of C4 grasses.

Numerical modeling of the effects of fire-induced convection and fire-atmosphere interactions on wildfire spread and fire plume dynamics

NASA Astrophysics Data System (ADS)

Sun, Ruiyu

It is possible due to present day computing power to produce a fluid dynamical physically-based numerical solution to wildfire behavior, at least in the research mode. This type of wildfire modeling affords a flexibility and produces details that are not available in either current operational wildfire behavior models or field experiments. However before using these models to study wildfire, validation is necessary, and model results need to be systematically and objectively analyzed and compared to real fires. Plume theory and data from the Meteotron experiment, which was specially designed to provide results from measurements for the theoretical study of a convective plume produced by a high heat source at the ground, are used here to evaluate the fire plume properties simulated by two numerical wildfire models, the Fire Dynamics Simulator or FDS, and the Clark coupled atmosphere-fire model. The study indicates that the FDS produces good agreement with the plume theory and the Meteotron results. The study also suggests that the coupled atmosphere-fire model, a less explicit and ideally less computationally demanding model than the FDS; can produce good agreement, but that the agreement is sensitive to the method of putting the energy released from the fire into the atmosphere. The WFDS (Wildfire and wildland-urban interface FDS), an extension of the FDS to the vegetative fuel, and the Australian grass fire experiments are used to evaluate and improve the UULES-wildfire coupled model. Despite the simple fire parameterization in the UULES-wildfire coupled model, the fireline is fairly well predicted in terms of both shape and location in the simulation of Australian grass fire experiment F19. Finally, the UULES-wildfire coupled model is used to examine how the turbulent flow in the atmospheric boundary layer (ABL) affects the growth of the grass fires. The model fires showed significant randomness in fire growth: Fire spread is not deterministic in the ABL, and a probabilistic prediction method is warranted. Of the two contributors to the variability in fire growth in the grass fire simulations in the ABL, fire-induced convection, as opposed to the turbulent ABL wind, appears to be the more important one. One mechanism associated with enhanced fire-induced flow is the downdraft behind the frontal fireline. The downdraft is the direct result of the random interaction between the fire plume and the large eddies in the ABL. This study indicates a connection between fire variability in rate of spread and area burnt and so-called convective velocity scale, and it may be possible to use this boundary-layer scale parameter to account for the effects of ABL turbulence on fire spread and fire behavior in today's operational fire prediction systems.

78 FR 49149 - Endangered and Threatened Wildlife and Plants; Determination of Endangered Status for Sphaeralcea...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-13

... to further declines through stochastic wildfire events, spread of the nonnative grasses, and climate... descriptions predict the annual production (pounds per acre) of plant groups (grass/grass-like, forbs, shrub... than fewer numbers of shrubs and perennial grasses. Therefore, although an ecological site description...

75 FR 17716 - Notice of Receipt of Requests to Voluntarily Cancel Certain Pesticide Registrations

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-07

...- Clean Extra isopropylammonium Strength Systemic Weed + Grass 000070-00284 Rigo Neat'n Glyphosate- Clean isopropylammonium Concentrate Systemic Weed and Grass 000100-00530 Methidathion Methidathion Technical 000100 AR-03... Weed and Grass Killer 000192-00177 Dexol Weed Diquat dibromide &Grass Killer 000192-00178 Dexol Weed...

26 CFR 56.4911-6 - Records of lobbying and grass roots expenditures.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 26 Internal Revenue 17 2010-04-01 2010-04-01 false Records of lobbying and grass roots... lobbying and grass roots expenditures. (a) Records of lobbying expenditures. An electing public charity... organization must keep a record include the following: (1) Expenditures for grass roots lobbying, as described...

26 CFR 56.4911-6 - Records of lobbying and grass roots expenditures.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 26 Internal Revenue 17 2011-04-01 2011-04-01 false Records of lobbying and grass roots... lobbying and grass roots expenditures. (a) Records of lobbying expenditures. An electing public charity... organization must keep a record include the following: (1) Expenditures for grass roots lobbying, as described...

75 FR 4279 - Pendimethalin; Pesticide Tolerances

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-27

...-dimethyl-2,6- dinitrobenzenamine, in or on grass forage, fodder, and hay crop group 17, forage; grass forage, fodder, and hay crop group 17, hay; and grass forage, fodder, and hay crop group 17, straw. BASF...-dinitrobenzyl alcohol, expressed as the stoichiometric equivalent of pendimethalin, in or on grass forage...

Modulation of phytochrome signaling networks for improved biomass accumulation using a bioenergy crop model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mockler, Todd C.

Plant growth and development, including stem elongation, flowering time, and shade-avoidance habits, are affected by wavelength composition (i.e., light quality) of the light environment. the molecular mechanisms underlying light perception and signaling pathways in plants have been best characterized in Arabidopsis thaliana where dozens of genes have been implicated in converging, complementary, and antagonistic pathways communicating light quality cues perceived by the phytochrome (red/far-red) cryptochrome (blue) and phototropin (blue) photorecptors. Light perception and signaling have been studied in grasses, including rice and sorghum but in much less detail than in Arabidopsis. During the course of the Mocker lab's DOE-funded wrokmore » generating a gene expression atlas in Brachypodium distachyon we observed that Brachypodium plants grown in continuous monochromatic red light or continuous white light enriched in far-red light accumulated significantly more biomass and exhibited significantly greater seed yield than plants grown in monochromatic blue light or white light. This phenomenon was also observed in two other grasses, switchgrass and rice. We will systematically manipulate the expression of genes predicted to function in Brachypodium phytochrome signaling and assess the phenotypic consequences in transgenic Brachypodium plants in terms of morphology, stature, biomass accumulation, and cell wall composition. We will also interrogate direct interactions between candidate phytochrome signaling transcription factors and target promoters using a high-throughput yeast one-hybrid system. Brachypodium distachyon has emerged as a model grass species and is closely related to candidate feedstock crops for bioethanol production. Identification of genes capable of modifying growth characteristics of Brachypodium, when misexpressed, in particular increasing biomass accumulation, by modulating photoreceptor signaling will provide valuable candidates for manipulation in biomass and biofuel feedstock grass crops through targeted breeding or engineering efforts.« less

Carbon and Water Vapor Fluxes of Different Ecosystems in Oklahoma

NASA Astrophysics Data System (ADS)

Wagle, P.; Gowda, P. H.; Northup, B. K.

2016-12-01

Information on exchange of energy, carbon dioxide (CO2), and water vapor (H2O) for major terrestrial ecosystems is vital to quantify carbon and water balances on a large-scale. It is also necessary to develop, test, and improve crop models and satellite-based production efficiency and evapotranspiration (ET) models, and to better understand the potential of terrestrial ecosystems to mitigate rising atmospheric CO2 concentration and climate change. A network (GRL-FLUXNET) of nine eddy flux towers has been established over a diverse range of terrestrial ecosystems, including native and improved perennial grasslands [unburned and grazed tallgrass prairie, burned and grazed tallgrass prairie, and burned Bermuda grass (Cynodon dactylon L.)], grazed and non-grazed winter wheat (Triticum aestivum L.), till and no-till winter wheat and canola (Brassica napus L.), alfalfa (Medicago sativa L.), and soybean (Glycine max L.), at the USDA-ARS, Grazinglands Research Laboratory, El Reno, OK. In this presentation, we quantify and compare net ecosystem CO2 exchange (NEE) and ET between recently burned and grazed tallgrass prairie and burned and non-grazed Bermuda grass pastures, alfalfa, and soybean. Preliminary results show monthly ensembles average NEE reached seasonal peak values of -29, -35, -25, and -20 µmol m-2 s-1 in burned tallgrass prairie pasture, burned Bermuda grass pasture, alfalfa, and soybean, respectively. Similarly, monthly ensembles average ET reached seasonal peak values of 0.22, 0.27, 0.25, 0.28 mm 30-min-1 in burned tallgrass prairie pasture, burned Bermuda grass pasture, alfalfa, and soybean, respectively. Seasonal patterns and daily magnitudes of NEE and ET and their responses to the similar climatic conditions will be further investigated.

Late Cretaceous origin of the rice tribe provides evidence for early diversification in Poaceae.

PubMed

Prasad, V; Strömberg, C A E; Leaché, A D; Samant, B; Patnaik, R; Tang, L; Mohabey, D M; Ge, S; Sahni, A

2011-09-20

Rice and its relatives are a focal point in agricultural and evolutionary science, but a paucity of fossils has obscured their deep-time history. Previously described cuticles with silica bodies (phytoliths) from the Late Cretaceous period (67-65 Ma) of India indicate that, by the latest Cretaceous, the grass family (Poaceae) consisted of members of the modern subclades PACMAD (Panicoideae-Aristidoideae-Chloridoideae-Micrairoideae-Arundinoideae-Danthonioideae) and BEP (Bambusoideae-Ehrhartoideae-Pooideae), including a taxon with proposed affinities to Ehrhartoideae. Here we describe additional fossils and show that, based on phylogenetic analyses that combine molecular genetic data and epidermal and phytolith features across Poaceae, these can be assigned to the rice tribe, Oryzeae, of grass subfamily Ehrhartoideae. The new Oryzeae fossils suggest substantial diversification within Ehrhartoideae by the Late Cretaceous, pushing back the time of origin of Poaceae as a whole. These results, therefore, necessitate a re-evaluation of current models for grass evolution and palaeobiogeography.

Comprehensive Understanding for Vegetated Scene Radiance Relationships

NASA Technical Reports Server (NTRS)

Kimes, D. S.; Deering, D. W.

1984-01-01

The improvement of our fundamental understanding of the dynamics of directional scattering properties of vegetation canopies through analysis of field data and model simulation data is discussed. Directional reflectance distributions spanning the entire existance hemisphere were measured in two field studies; one using a Mark III 3-band radiometer and one using rapid scanning bidirectional field instrument called PARABOLA. Surfaces measured included corn, soybeans, bare soils, grass lawn, orchard grass, alfalfa, cotton row crops, plowed field, annual grassland, stipa grass, hard wheat, salt plain shrubland, and irrigated wheat. Some structural and optical measurements were taken. Field data show unique reflectance distributions ranging from bare soil to complete vegetation canopies. Physical mechanisms causing these trends are proposed based on scattering properties of soil and vegetation. Soil exhibited a strong backscattering peak toward the Sun. Complete vegetation exhibited a bowl distribution with the minimum reflectance near nadir. Incomplete vegetation canopies show shifting of the minimum reflectance off of nadir in the forward scattering direction because both the scattering properties or the vegetation and soil are observed.

[Association of phytoplasma with Bermuda grass white-leaf disease].

PubMed

Tan, Weijun; Chen, Yong; Zhang, Wu; Han, Chengchou; Tan, Zhiyuan; Zhang, Juming

2008-10-01

Bermuda grass white leaf is an important disease on Bermuda grass all over the world. The aim of this research is to identify the pathogen which leads to Bermuda grass white leaf occurring on the Chinese mainland. PCR amplification technique, sequence analysis and Southern hybridization were used. A 1.3 kb fragment was amplified by PCR phytoplasma universal primers and total DNA sample extracted from ill Bermuda grass as the amplified template. Sequence analysis of the amplified fragment indicated it clustered into Candidatus Phytoplasm Cynodontis. Southern hybridization analysis showed differential cingulums. The pathogen of Bermuda grass white leaf on the Chinese mainland contains phytoplasma, which provides a scientific basis for further identification, prevention and control of the disease.

Prediction of senescent rangeland canopy structural attributes with airborne hyperspectral imagery

USDA-ARS?s Scientific Manuscript database

Canopy structural and chemical data are needed for senescent, mixed-grass prairie landscapes in autumn, yet models driven by image data are lacking for rangelands dominated by non-photosynthetically active vegetation (NPV). Here, we report how aerial hyperspectral imagery might be modeled to predic...

APEX Model Simulation for Row Crop Watersheds with Agroforestry and Grass Buffers

USDA-ARS?s Scientific Manuscript database

Watershed model simulation has become an important tool in studying ways and means to reduce transport of agricultural pollutants. Conducting field experiments to assess buffer influences on water quality are constrained by the large-scale nature of watersheds, high experimental costs, private owner...

Biotechnological application of sustainable biogas production through dry anaerobic digestion of Napier grass.

PubMed

Dussadee, Natthawud; Ramaraj, Rameshprabu; Cheunbarn, Tapana

2017-05-01

Napier grass (Pennisetum purpureum), represents an interesting substrate for biogas production. The research project evaluated biogas potential production from dry anaerobic digestion of Napier grass using batch experiment. To enhance the biogas production from ensiled Napier grass, thermal and alkaline pre-treatments were performed in batch mode. Alkali hydrolysis of Napier grass was performed prior to batch dry anaerobic digestion at three different mild concentrations of sodium hydroxide (NaOH). The study results confirmed that NaOH pretreated sample produced high yield of biogas than untreated (raw) and hot water pretreated samples. Napier grass was used as the mono-substrate. The biogas composition of carbon dioxide (30.10%), methane (63.50%) and 5 ppm of H 2 S was estimated from the biogas. Therefore, fast-growing, high-yielding and organic matter-enriched of Napier grass was promising energy crop for biogas production.

Multi-scale habitat selection of the endangered Hawaiian Goose

USGS Publications Warehouse

Leopold, Christina R.; Hess, Steven C.

2013-01-01

After a severe population reduction during the mid-20th century, the endangered Hawaiian Goose (Branta sandvicensis), or Nēnē, has only recently re-established its seasonal movement patterns on Hawai‘i Island. Little is currently understood about its movements and habitat use during the nonbreeding season. The objectives of this research were to identify habitats preferred by two subpopulations of the Nēnē and how preferences shift seasonally at both meso-and fine scales. From 2009 to 2011, ten Nēnē ganders were outfitted with 40-to 45-g satellite transmitters with GPS capability. We used binary logistic regression to compare habitat use versus availability and an information-theoretic approach for model selection. Meso-scale habitat modeling revealed that Nēnē preferred exotic grass and human-modified landscapes during the breeding and molting seasons and native subalpine shrubland during the nonbreeding season. Fine-scale habitat modeling further indicated preference for exotic grass, bunch grass, and absence of trees. Proximity to water was important during molt, suggesting that the presence of water may provide escape from introduced mammalian predators while Nēnē are flightless. Finescale species-composition data added relatively little to understanding of Nēnē habitat preferences modeled at the meso scale, suggesting that the meso-scale is appropriate for management planning. Habitat selection during our study was consistent with historical records, although dissimilar from more recent studies of other subpopulations. Nēnē make pronounced seasonal movements between existing reserves and use distinct habitat types; understanding annual patterns has implications for the protection and restoration of important seasonal habitats.

7 CFR 1437.310 - Sea grass and sea oats.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 10 2012-01-01 2012-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310 Agriculture Regulations of the Department of Agriculture (Continued) COMMODITY CREDIT CORPORATION, DEPARTMENT... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss...

7 CFR 1437.310 - Sea grass and sea oats.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 10 2013-01-01 2013-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310 Agriculture Regulations of the Department of Agriculture (Continued) COMMODITY CREDIT CORPORATION, DEPARTMENT... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss...

7 CFR 1437.310 - Sea grass and sea oats.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 10 2014-01-01 2014-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310 Agriculture Regulations of the Department of Agriculture (Continued) COMMODITY CREDIT CORPORATION, DEPARTMENT... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss...

Chemicals Reduce Need To Mow Grass

NASA Technical Reports Server (NTRS)

Humphrys, Brooks; Farley, Max; Gast, Larry J.

1993-01-01

Brief report discusses use of herbicides Roundup(R), Campaign(R), and Oust(R) to retard growth of Argentine bahia grass. Herbicide applied by use of spraying apparatus pulled by tractor. "Chemical mowing" keeps grass at "freshly mowed" height with less mechanical mowing. Applied to grass on shoulders of roads, reducing time spent on mowing.

NITROGEN MOVEMENT AND WATER QUALITY AT A POORLY-DRAINED AGRICULTURAL AND RIPARIAN SITE IN THE PACIFIC NORTHWEST

EPA Science Inventory

Grass seed cropping systems in the Pacific Northwest account for about half of the cool-season forage and turf grass seed production in the world. Grass seed cropping systems are intensely managed with inorganic fertilizers to sustain production. Much of the land where grass seed...

78 FR 12703 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Amendment to the Corals and Reef...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-02-25

.... The Coral FMP currently includes four individual species of seagrasses: turtle grass (Thalassia testudinum), manatee grass (Syringodium filiforme), shoal grass (Halodule wrightii), widgeon grass (Ruppia maritima), and one group of species, the sea vines (Halophila spp., including H. decipiens, H. baillonis, H...

7 CFR 201.56-5 - Grass family, Poaceae (Gramineae).

Code of Federal Regulations, 2011 CFR

2011-01-01

... grasses listed in § 201.2(h). (a) Cereals: Agrotricum, barley, oat, rye, mountain rye, wheat, wheat... 7 Agriculture 3 2011-01-01 2011-01-01 false Grass family, Poaceae (Gramineae). 201.56-5 Section... ACT FEDERAL SEED ACT REGULATIONS Germination Tests in the Administration of the Act § 201.56-5 Grass...

26 CFR 56.4911-3 - Expenditures for direct and/or grass roots lobbying communications.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 26 Internal Revenue 17 2011-04-01 2011-04-01 false Expenditures for direct and/or grass roots....4911-3 Expenditures for direct and/or grass roots lobbying communications. (a) Definition of term... lobbying communication's costs is a direct lobbying expenditure, what portion is a grass roots expenditure...

7 CFR 201.56-5 - Grass family, Poaceae (Gramineae).

Code of Federal Regulations, 2010 CFR

2010-01-01

... grasses listed in § 201.2(h). (a) Cereals: Agrotricum, barley, oat, rye, mountain rye, wheat, wheat... 7 Agriculture 3 2010-01-01 2010-01-01 false Grass family, Poaceae (Gramineae). 201.56-5 Section... ACT FEDERAL SEED ACT REGULATIONS Germination Tests in the Administration of the Act § 201.56-5 Grass...

26 CFR 56.4911-3 - Expenditures for direct and/or grass roots lobbying communications.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 26 Internal Revenue 17 2010-04-01 2010-04-01 false Expenditures for direct and/or grass roots....4911-3 Expenditures for direct and/or grass roots lobbying communications. (a) Definition of term... lobbying communication's costs is a direct lobbying expenditure, what portion is a grass roots expenditure...

76 FR 23891 - Pyrasulfotole; Pesticide Tolerances

Federal Register 2010, 2011, 2012, 2013, 2014

2011-04-29

... regulation establishes or revises tolerances for residues of pyrasulfotole in or on grain sorghum, grass, and...); sorghum, forage at 1.2 ppm; sorghum, stover at 0.35 ppm; grass, hay at 2.5 ppm; and grass, forage at 10... levels for sorghum, grass; and livestock commodities. The reasons for these changes are explained in Unit...

Invasion of the exotic grasses: Mapping their progression via satellite

Treesearch

Eric B. Peterson

2008-01-01

Several exotic annual grass species are invading the Intermountain West. After disturbances including wildfire, these grasses can form dense stands with fine fuels that then shorten fire intervals. Thus invasive annual grasses and wildfire form a positive feedback mechanism that threatens native ecosystems. Chief among these within Nevada are Bromus tectorum...

9 CFR 72.19 - Interstate shipments and use of pine straw, grass, litter from quarantined area; prohibited until...

Code of Federal Regulations, 2010 CFR

2010-01-01

... straw, grass, litter from quarantined area; prohibited until disinfected. 72.19 Section 72.19 Animals... Interstate shipments and use of pine straw, grass, litter from quarantined area; prohibited until disinfected. Pine straw, grass, or similar litter collected from tick-infested pastures, ranges, or premises may...

9 CFR 72.19 - Interstate shipments and use of pine straw, grass, litter from quarantined area; prohibited until...

Code of Federal Regulations, 2011 CFR

2011-01-01

... straw, grass, litter from quarantined area; prohibited until disinfected. 72.19 Section 72.19 Animals... Interstate shipments and use of pine straw, grass, litter from quarantined area; prohibited until disinfected. Pine straw, grass, or similar litter collected from tick-infested pastures, ranges, or premises may...

Aggressiveness of loose kernel smut isolate from Johnson grass on sorghum line BTx643

USDA-ARS?s Scientific Manuscript database

An isolate of loose kernel smut obtained from Johnson grass was inoculated unto six BTx643 sorghum plants in the greenhouse to determine its aggressiveness. All the BTx643 sorghum plants inoculated with the Johnson grass isolate were infected. Mean size of the teliospores from the Johnson grass, i...

From the Lab Bench: Differences in annual and perennial grasses in meeting cattle production goals

USDA-ARS?s Scientific Manuscript database

A column was written that provided the advantages and disadvantages of annual warm- and cool-season grasses. Warm-season annual grasses can increase the supply of forage during the summer slump in cool-season perennial grass growth. Utilization of toxic endophyte-infected tall fescue pastures can ...

Genome-Wide Analysis of Syntenic Gene Deletion in the Grasses

PubMed Central

Schnable, James C.; Freeling, Michael; Lyons, Eric

2012-01-01

The grasses, Poaceae, are one of the largest and most successful angiosperm families. Like many radiations of flowering plants, the divergence of the major grass lineages was preceded by a whole-genome duplication (WGD), although these events are not rare for flowering plants. By combining identification of syntenic gene blocks with measures of gene pair divergence and different frequencies of ancient gene loss, we have separated the two subgenomes present in modern grasses. Reciprocal loss of duplicated genes or genomic regions has been hypothesized to reproductively isolate populations and, thus, speciation. However, in contrast to previous studies in yeast and teleost fishes, we found very little evidence of reciprocal loss of homeologous genes between the grasses, suggesting that post-WGD gene loss may not be the cause of the grass radiation. The sets of homeologous and orthologous genes and predicted locations of deleted genes identified in this study, as well as links to the CoGe comparative genomics web platform for analyzing pan-grass syntenic regions, are provided along with this paper as a resource for the grass genetics community. PMID:22275519

Testing the Li-Strahler four-component canopy reflectance model in the HAPEX-Sahel shrub savanna sites using ground reflectance data

NASA Technical Reports Server (NTRS)

Franklin, J.; Duncan, J.

1992-01-01

The rate at which a light field decays in water is characterized by the diffuse attenuation coefficient k. The Li-Strahler discrete-object canopy reflectance model was tested in two sites, a shrub grass savanna and a degraded shrub savanna on bare soil, in the proposed HAPEX (Hydrologic Atmospheric Pilot Experiment) II/Sahel study area in Niger, West Africa. Average site reflectance was predicted for each site from the reflectances and cover proportions of four components: shrub canopy, background (soil or grass and soil), shaded canopy, and shaded background. Component reflectances were sampled in the SPOT wavebands using a hand-held radiometer. Predicted reflectance was compared to average site reflectance measured using the same radiometer mounted on a backpack with measurements recorded every 5 m along two 1-km transects, also in the SPOT (Systeme Probatoire d'Observation de la Terre) bands. Measurements and predictions were made for each of the three days during the summer growing season, approximately two weeks apart. Red, near infrared reflectance, and the NDVI (normalized difference vegetation index) were all predicted with a high degree of accuracy for the shrub/grass site and with reasonable accuracy for the degraded shrub site.

Parallelization of interpolation, solar radiation and water flow simulation modules in GRASS GIS using OpenMP

NASA Astrophysics Data System (ADS)

Hofierka, Jaroslav; Lacko, Michal; Zubal, Stanislav

2017-10-01

In this paper, we describe the parallelization of three complex and computationally intensive modules of GRASS GIS using the OpenMP application programming interface for multi-core computers. These include the v.surf.rst module for spatial interpolation, the r.sun module for solar radiation modeling and the r.sim.water module for water flow simulation. We briefly describe the functionality of the modules and parallelization approaches used in the modules. Our approach includes the analysis of the module's functionality, identification of source code segments suitable for parallelization and proper application of OpenMP parallelization code to create efficient threads processing the subtasks. We document the efficiency of the solutions using the airborne laser scanning data representing land surface in the test area and derived high-resolution digital terrain model grids. We discuss the performance speed-up and parallelization efficiency depending on the number of processor threads. The study showed a substantial increase in computation speeds on a standard multi-core computer while maintaining the accuracy of results in comparison to the output from original modules. The presented parallelization approach showed the simplicity and efficiency of the parallelization of open-source GRASS GIS modules using OpenMP, leading to an increased performance of this geospatial software on standard multi-core computers.

Differential growth responses of Brachypodium distachyon genotypes to inoculation with plant growth promoting rhizobacteria.

PubMed

do Amaral, Fernanda P; Pankievicz, Vânia C S; Arisi, Ana Carolina M; de Souza, Emanuel M; Pedrosa, Fabio; Stacey, Gary

2016-04-01

Plant growth promoting rhizobacteria (PGPR) can associate and enhance the growth of important crop grasses. However, in most cases, the molecular mechanisms responsible for growth promotion are not known. Such research could benefit by the adoption of a grass model species that showed a positive response to bacterial inoculation and was amenable to genetic and molecular research methods. In this work we inoculated different genotypes of the model grass Brachypodium distachyon with two, well-characterized PGPR bacteria, Azospirillum brasilense and Herbaspirillum seropedicae, and evaluated the growth response. Plants were grown in soil under no nitrogen or with low nitrogen (i.e., 0.5 mM KNO3). A variety of growth parameters (e.g., shoot height, root length, number of lateral roots, fresh and dry weight) were measured 35 days after inoculation. The data indicate that plant genotype plays a very important role in determining the plant response to PGPR inoculation. A positive growth response was observed with only four genotypes grown under no nitrogen and three genotypes tested under low nitrogen. However, in contrast, relatively good root colonization was seen with most genotypes, as measured by drop plate counting and direct, microscopic examination of roots. In particular, the endophytic bacteria H. seropedicae showed strong epiphytic and endophytic colonization of roots.

Sod-seeding to modify coastal bermuda grass on reclaimed lignite overburden in Texas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skousen, J.G.

1986-01-01

This study was conducted to investigate the ability of nine low-maintenance species to establish and persist with Coastal bermuda grass (Cynodon dactylon (L.) Pers.) established on reclaimed lignite overburden; to evaluate the establishment and persistence of seventeen low-maintenance species seeded in overburden with no vegetation cover; and to examine seeding mixtures and rates for establishing low-maintenance species into three cover types (bermuda grass, oats, (Avena fatua L.) and no cover). Seventeen low-maintenance species established and persisted in overburden without fertilization during years of low precipitation. Several seeded grasses showed sufficient stand development in monoculture for erosion control. Most of themore » other seeded species were slower in establishment, yet persisted on the site and promoted multiple use of the reclaimed area. Recommended seeding rates were generally adequate for seedling establishment in oat, bermuda grass, and no vegetation cover types. Sod-seeding into bermuda grass resulted in higher seedling densities than those in oats and no cover because of stored moisture beneath the sod during bermuda grass dormancy. Using /sup 15/N-labelled fertilizer, Coastal bermuda grass demonstrated the ability to rapidly recovery applied N. Maximilian sunflower (Helianthus maximiliani Schrad.) was suppressed by Coastal bermuda grass in mixture at all fertilizer N rates.« less

Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

DOE PAGES

Milano, Elizabeth R.; Payne, Courtney E.; Wolfrum, Edward J.; ...

2018-02-03

Biofuels derived from lignocellulosic plant material are an important component of current renewable energy strategies. Improvement efforts in biofuel feedstock crops have been primarily focused on increasing biomass yield with less consideration for tissue quality or composition. Four primary components found in the plant cell wall contribute to the overall quality of plant tissue and conversion characteristics, cellulose and hemicellulose polysaccharides are the primary targets for fuel conversion, while lignin and ash provide structure and defense. We explore the genetic architecture of tissue characteristics using a quantitative trait loci (QTL) mapping approach in Panicum hallii, a model lignocellulosic grass system.more » Diversity in the mapping population was generated by crossing xeric and mesic varietals, comparative to northern upland and southern lowland ecotypes in switchgrass. We use near-infrared spectroscopy with a primary analytical method to create a P. hallii specific calibration model to quickly quantify cell wall components. Ash, lignin, glucan, and xylan comprise 68% of total dry biomass in P. hallii: comparable to other feedstocks. We identified 14 QTL and one epistatic interaction across these four cell wall traits and found almost half of the QTL to localize to a single linkage group. Panicum hallii serves as the genomic model for its close relative and emerging biofuel crop, switchgrass (P. virgatum). We used high throughput phenotyping to map genomic regions that impact natural variation in leaf tissue composition. Understanding the genetic architecture of tissue traits in a tractable model grass system will lead to a better understanding of cell wall structure as well as provide genomic resources for bioenergy crop breeding programs.« less

Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

DOE Office of Scientific and Technical Information (OSTI.GOV)

Milano, Elizabeth R.; Payne, Courtney E.; Wolfrum, Edward J.

Biofuels derived from lignocellulosic plant material are an important component of current renewable energy strategies. Improvement efforts in biofuel feedstock crops have been primarily focused on increasing biomass yield with less consideration for tissue quality or composition. Four primary components found in the plant cell wall contribute to the overall quality of plant tissue and conversion characteristics, cellulose and hemicellulose polysaccharides are the primary targets for fuel conversion, while lignin and ash provide structure and defense. We explore the genetic architecture of tissue characteristics using a quantitative trait loci (QTL) mapping approach in Panicum hallii, a model lignocellulosic grass system.more » Diversity in the mapping population was generated by crossing xeric and mesic varietals, comparative to northern upland and southern lowland ecotypes in switchgrass. We use near-infrared spectroscopy with a primary analytical method to create a P. hallii specific calibration model to quickly quantify cell wall components. Ash, lignin, glucan, and xylan comprise 68% of total dry biomass in P. hallii: comparable to other feedstocks. We identified 14 QTL and one epistatic interaction across these four cell wall traits and found almost half of the QTL to localize to a single linkage group. Panicum hallii serves as the genomic model for its close relative and emerging biofuel crop, switchgrass (P. virgatum). We used high throughput phenotyping to map genomic regions that impact natural variation in leaf tissue composition. Understanding the genetic architecture of tissue traits in a tractable model grass system will lead to a better understanding of cell wall structure as well as provide genomic resources for bioenergy crop breeding programs.« less

Acute toxic effects of endosulfan sulfate on three life stages of grass shrimp, Palaemonetes pugio.

PubMed

Key, Peter B; Chung, Katy W; Venturella, John J; Shaddrick, Brian; Fulton, Michael H

2010-01-01

In this study, the toxicity of endosulfan sulfate, the primary degradation product of the insecticide endosulfan, was determined in three life stages of the grass shrimp (Palaemonetes pugio). After 96 h exposure to endosulfan sulfate, the grass shrimp adult LC50 was 0.86 microg/L (95% CI 0.56-1.31), the grass shrimp larvae LC50 was 1.64 microg/L (95% CI 1.09-2.47) and the grass shrimp embryo LC50 was 45.85 microg/L (95% CI 23.72-88.61 microg/L). This was compared to the previously published grass shrimp 96-h LC50s for endosulfan. The toxicity of the two compounds was similar for the grass shrimp life stages with adults more sensitive than larvae and embryos. The presence of sediment in 24h endosulfan sulfate-exposures raised LC50s for both adult and larval grass shrimp but not significantly. The USEPA expected environmental concentrations (EEC) for total endosulfan and endosulfan sulfate and the calculations of risk quotients (RQ) based on the more sensitive adult grass shrimp 96-h LC50 clearly show that environmental concentrations equal to acute EECs would prove detrimental to grass shrimp or other similarly sensitive aquatic organisms. These results indicate that given the persistence and toxicity of endosulfan sulfate, future risk assessments should consider the toxicity potential of the parent compound as well as this degradation product.

Fuels planning: science synthesis and integration; environmental consequences fact sheet 10: The Understory Response Model

Treesearch

Steve Sutherland; Melanie Miller

2005-01-01

The Understory Response Model is a species-specific computer model that qualitatively predicts change in total species biomass for grasses, forbs, and shrubs after thinning, prescribed fire, or wildfire. The model examines the effect of fuels management on plant survivorship and reproduction. This fact sheet identifies the intended users and uses, required inputs, what...

A site-specific screening comparison of modeled and monitored air dispersion and deposition for perfluorooctanoate.

PubMed

Barton, Catherine A; Zarzecki, Charles J; Russell, Mark H

2010-04-01

This work assessed the usefulness of a current air quality model (American Meteorological Society/Environmental Protection Agency Regulatory Model [AERMOD]) for predicting air concentrations and deposition of perfluorooctanoate (PFO) near a manufacturing facility. Air quality models play an important role in providing information for verifying permitting conditions and for exposure assessment purposes. It is important to ensure traditional modeling approaches are applicable to perfluorinated compounds, which are known to have unusual properties. Measured field data were compared with modeling predictions to show that AERMOD adequately located the maximum air concentration in the study area, provided representative or conservative air concentration estimates, and demonstrated bias and scatter not significantly different than that reported for other compounds. Surface soil/grass concentrations resulting from modeled deposition flux also showed acceptable bias and scatter compared with measured concentrations of PFO in soil/grass samples. Errors in predictions of air concentrations or deposition may be best explained by meteorological input uncertainty and conservatism in the PRIME algorithm used to account for building downwash. In general, AERMOD was found to be a useful screening tool for modeling the dispersion and deposition of PFO in air near a manufacturing facility.

Differences in breeding bird assemblages related to reed canary grass cover cover and forest structure on the Upper Mississippi River

USGS Publications Warehouse

Kirsch, Eileen M.; Gray, Brian R.

2017-01-01

Floodplain forest of the Upper Mississippi River provides habitat for an abundant and diverse breeding bird community. However, reed canary grass Phalaris arundinacea invasion is a serious threat to the future condition of this forest. Reed canary grass is a well-known aggressive invader of wetland systems in the northern tier states of the conterminous United States. Aided by altered flow regimes and nutrient inputs from agriculture, reed canary grass has formed dense stands in canopy gaps and forest edges, retarding tree regeneration. We sampled vegetation and breeding birds in Upper Mississippi River floodplain forest edge and interior areas to 1) measure reed canary grass cover and 2) evaluate whether the breeding bird assemblage responded to differences in reed canary grass cover. Reed canary grass was found far into forest interiors, and its cover was similar between interior and edge sites. Bird assemblages differed between areas with more or less reed canary grass cover (.53% cover breakpoint). Common yellowthroat Geothlypis trichas, black-capped chickadee Parus atricapillus, and rose-breasted grosbeak Pheucticus ludovicianus were more common and American redstart Setophaga ruticilla, great crested flycatcher Myiarchus crinitus, and Baltimore oriole Icterus galbula were less common in sites with more reed canary grass cover. Bird diversity and abundance were similar between sites with different reed canary grass cover. A stronger divergence in bird assemblages was associated with ground cover ,15%, resulting from prolonged spring flooding. These sites hosted more prothonotary warbler Protonotaria citrea, but they had reduced bird abundance and diversity compared to other sites. Our results indicate that frequently flooded sites may be important for prothonotary warblers and that bird assemblages shift in response to reed canary grass invasion.

Establishing native warm season grasses on Eastern Kentucky strip mines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barnes, T.G.; Larkin, J.L.; Arnett, M.B.

1998-12-31

The authors evaluated various methods of establishing native warm season grasses on two reclaimed Eastern Kentucky mines from 1994--1997. Most current reclamation practices incorporate the use of tall fescue (Festuca arundinacea) and other cool-season grasses/legumes that provide little wildlife habitats. The use of native warm season grasses will likely improve wildlife habitat on reclaimed strip mines. Objectives of this study were to compare the feasibility of establishing these grasses during fall, winter, or spring using a native rangeland seeder or hydroseeding; a fertilizer application at planting; or cold-moist stratification prior to hydroseeding. Vegetative cover, bare ground, species richness, and biomassmore » samples were collected at the end of each growing season. Native warm season grass plantings had higher plant species richness compared to cool-season reclamation mixtures. There was no difference in establishment of native warm season grasses as a result of fertilization or seeding technique. Winter native warm season grass plantings were failures and cold-moist stratification did not increase plant establishment during any season. As a result of a drought during 1997, both cool-season and warm season plantings were failures. Cool-season reclamation mixtures had significantly more vegetative cover and biomass compared to native warm season grass mixtures and the native warm season grass plantings did not meet vegetative cover requirements for bond release. Forbs and legumes that established well included pale purple coneflower (Echinacea pallida), lance-leaf coreopsis (Coreopsis lanceolata), round-headed lespedeza (Lespedeza capitata), partridge pea (Cassia fasiculata), black-eyed susan (Rudbeckia hirta), butterfly milkweed (Asclepias tuberosa), and bergamot (Monarda fistulosa). Results from two demonstration plots next to research plots indicate it is possible to establish native warm season grasses on Eastern Kentucky strip mines for wildlife habitat.« less

Detrimental and neutral effects of a wild grass-fungal endophyte symbiotum on insect preference and performance.

PubMed

Clement, Stephen L; Hu, Jinguo; Stewart, Alan V; Wang, Bingrui; Elberson, Leslie R

2011-01-01

Seed-borne Epichloë/Neotyphodium Glenn, Bacon, Hanlin (Ascomycota: Hypocreales: Clavicipitaceae) fungal endophytes in temperate grasses can provide protection against insect attack with the degree of host resistance related to the grass-endophyte symbiotum and the insect species involved in an interaction. Few experimental studies with wild grass-endophyte symbiota, compared to endophyte-infected agricultural grasses, have tested for anti-insect benefits, let alone for resistance against more than one insect species. This study quantified the preference and performance of the bird cherry oat-aphid, Rhopalosiphum padi (L.) (Hemiptera: Aphididae) and the cereal leaf beetle, Oulema melanopus (L.) (Coleoptera: Chrysomelidae), two important pests of forage and cereal grasses, on Neotyphodium-infected (E+) and uninfected (E-) plants of the wild grass Alpine timothy, Phleum alpinum L. (Poales: Poaceae). The experiments tested for both constitutive and wound-induced resistance in E+ plants to characterize possible plasticity of defense responses by a wild E+ grass. The aphid, R. padi preferred E- over E+ test plants in choice experiments and E+ undamaged test plants constitutively expressed antibiosis resistance to this aphid by suppressing population growth. Prior damage of E+ test plants did not induce higher levels of resistance to R. padi. By contrast, the beetle, O. melanopus showed no preference for E+ or E- test plants and endophyte infection did not adversely affect the survival and development of larvae. These results extend the phenomenon of variable effects of E+ wild grasses on the preference and performance of phytophagous insects. The wild grass- Neotyphodium symbiotum in this study broadens the number of wild E+ grasses available for expanded explorations into the effects of endophyte metabolites on insect herbivory.

7 CFR 319.41 - Notice of quarantine.

Code of Federal Regulations, 2011 CFR

2011-01-01

...), grain sorghums (Andropogon sorghum), Sudan grass (Andropogon sorghum sudanensis), Johnson grass... (Pennisetum glaucum), napier grass (Pennisetum purpureum), teosinte (Euchlaena luxurians), and jobs-tears...

7 CFR 319.41 - Notice of quarantine.

Code of Federal Regulations, 2010 CFR

2010-01-01

...), grain sorghums (Andropogon sorghum), Sudan grass (Andropogon sorghum sudanensis), Johnson grass... (Pennisetum glaucum), napier grass (Pennisetum purpureum), teosinte (Euchlaena luxurians), and jobs-tears...

Impact of grass cover on the magnetic susceptibility measurements for assessing metal contamination in urban topsoil.

PubMed

Golden, Nessa; Zhang, Chaosheng; Potito, Aaron P; Gibson, Paul J; Bargary, Norma; Morrison, Liam

2017-05-01

In recent decades, magnetic susceptibility monitoring has developed as a useful technique in environmental pollution studies, particularly metal contamination of soil. This study provides the first ever examination of the effects of grass cover on magnetic susceptibility (MS) measurements of underlying urban soils. Magnetic measurements were taken in situ to determine the effects on κ (volume magnetic susceptibility) when the grass layer was present (κ grass ) and after the grass layer was trimmed down to the root (κ no grass ). Height of grass was recorded in situ at each grid point. Soil samples (n=185) were collected and measurements of mass specific magnetic susceptibility (χ) were performed in the laboratory and frequency dependence (χ fd %) calculated. Metal concentrations (Pb, Cu, Zn and Fe) in the soil samples were determined and a gradiometry survey carried out in situ on a section of the study area. Significant correlations were found between each of the MS measurements and the metal content of the soil at the p<0.01 level. Spatial distribution maps were created using Inverse Distance Weighting (IDW) and Local Indicators of Spatial Association (LISA) to identify common patterns. κ grass (ranged from 1.67 to 301.00×10 -5 SI) and κ no grass (ranged from 2.08 to 530.67×10 -5 SI) measured in situ are highly correlated [r=0.966, n=194, p<0.01]. The volume susceptibility datasets in the presence and absence of grass coverage share a similar spatial distribution pattern. This study re-evaluates in situ κ monitoring techniques and the results suggest that the removal of grass coverage prior to obtaining in situ κ measurements of urban soil is unnecessary. This layer does not impede the MS sensor from accurately measuring elevated κ in soils, and therefore κ measurements recorded with grass coverage present can be reliably used to identify areas of urban soil metal contamination. Copyright © 2017 Elsevier Inc. All rights reserved.

Local versus landscape-scale effects of savanna trees on grasses

USGS Publications Warehouse

Riginos, C.; Grace, J.B.; Augustine, D.J.; Young, T.P.

2009-01-01

1. Savanna ecosystems - defined by the coexistence of trees and grasses - cover more than one-fifth the world's land surface and harbour most of the world's rangelands, livestock and large mammal diversity. Savanna trees can have a variety of effects on grasses, with consequences for the wild and domestic herbivores that depend on them. 2.Studies of these effects have focused on two different spatial scales. At the scale of individual trees, many studies have shown net positive effects of trees on sub-canopy grass nutrient concentrations and biomass. At the landscape scale, other studies have shown negative effects of high tree densities on grass productivity. These disparate results have led to different conclusions about the effects of trees on forage quality and ungulate nutrition in savannas. 3.We integrate these approaches by examining the effects of trees on grasses at both spatial scales and across a range of landscape-scale tree densities. 4.We quantified grass biomass, species composition and nutrient concentrations in these different contexts in an Acacia drepanolobium savanna in Laikipia, Kenya. Individual trees had positive effects on grass biomass, most likely because trees enrich soil nitrogen. Grass leaf phosphorus in sub-canopy areas, however, was depressed. The effects of individual trees could explain the effects of increasing landscape-scale tree cover for the biomass of only two of the four dominant grass species. 5.The negative effects of trees on grass and soil phosphorus, combined with depressed grass productivity in areas of high tree cover, suggest that ungulate nutrition may be compromised in areas with many trees. 6.Synthesis. We conclude that few, isolated trees may have positive local effects on savanna grasses and forage, but in areas of high tree density the negative landscape-scale effects of trees are likely to outweigh these positive effects. In savannas and other patchy landscapes, attempts to predict the consequences of changes in patch abundances for ecosystem services (e.g. rangeland productivity and carbon sequestration) will depend on our understanding of the extent to which local, patch-scale dynamics do or do not predict landscape-scale dynamics. ?? 2009 British Ecological Society.

Ensiling and hydrothermal pretreatment of grass: consequences for enzymatic biomass conversion and total monosaccharide yields

PubMed Central

2014-01-01

Background Ensiling may act as a pretreatment of fresh grass biomass and increase the enzymatic conversion of structural carbohydrates to fermentable sugars. However, ensiling does not provide sufficient severity to be a standalone pretreatment method. Here, ensiling of grass is combined with hydrothermal treatment (HTT) with the aim of improving the enzymatic biomass convertibility and decrease the required temperature of the HTT. Results Grass silage (Festulolium Hykor) was hydrothermally treated at temperatures of 170, 180, and 190°C for 10 minutes. Relative to HTT treated dry grass, ensiling increased the solubilization of dry matter (DM) during HTT and gave increased glucan content, but lower lignin in the insoluble fiber fraction. Ensiling improved glucose yields in the enzymatic hydrolysis of the washed solid fiber fraction at the lower HTT temperatures. At 170°C glucose yield improved from 17 to 24 (w/w)% (45 to 57% cellulose convertibility), and at 180°C glucose yield improved from 22 to 29 (w/w)% (54 to 69% cellulose convertibility). Direct HTT of grass at 190°C gave the same high glucose yield as for grass silage (35 (w/w)% (77% cellulose convertibility)) and improved xylan yields (27% xylan convertibility). The effect of ensiling of grass prior to HTT improved the enzymatic conversion of cellulose for HTT at 170 and 180°C, but the increased glucose release did not make up for the loss of water soluble carbohydrates (WSC) during ensiling. Overall, sugar yields (C6 + C5) were similar for HTT of grass and grass silage at both 170 and 180°C, but at 190°C the overall sugar yield was better for HTT of dry grass. Conclusions This study unequivocally establishes that ensiling of grass as a biomass pretreatment method comes with a loss of WSC. The loss of WSC by ensiling is not necessarily compensated for by providing a lower temperature requirement for HTT for high enzymatic monosaccharide release. However, ensiling can be an advantageous storage method prior to grass processing. PMID:25024743

Invasion of a semi-arid shrubland by annual grasses increases autotrophic and heterotrophic soil respiration rates due to altered soil moisture and temperature patterns

NASA Astrophysics Data System (ADS)

Mauritz, M.; Hale, I.; Lipson, D.

2010-12-01

Shrub <-> grassland conversions are a globally occurring phenomenon altering habitat structure, quality and nutrient cycling. Grasses and shrubs differ in their above and belowground biomass allocation, root architecture, phenology, litter quality and quantity. Conversion affects soil microbial communities, soil moisture and temperature and carbon (C) allocation patterns. However, the effect of conversion on C storage is regionally variable and there is no consistent direction of change. In Southern California invasion by annual grasses is a major threat to native shrub communities and it has been proposed that grass invasion increases NPP and ecosystem C storage (Wolkovich et al, 2009). In order to better understand how this shrub <-> grassland conversion changes ecosystem C storage it is important to understand the partitioning of soil respiration into autotrophic and heterotrophic components. Respiration was measured in plots under shrubs and grasses from February when it was cold and wet to July when it was hot and dry, capturing seasonal transitions in temperature and water availability. Roots were excluded under shrubs and grasses with root exclusion cores to quantify heterotrophic respiration. Using total soil respiration (Rt) = autotrophic respiration (root) (Ra)+ heterotrophic respiration (microbial) (Rh) the components contributing to total soil respiration can be evaluated. Respiration, soil moisture and temperature were measured daily at four hour intervals using Licor 8100 automated chamber measurements. Throughout the measurement period, Rt under grasses exceeded Rt under shrubs. Higher Rt levels under grasses were mainly due to higher Ra in grasses rather than changes in Rh. On average grass Ra was almost double shrub Ra. Higher grass respiration levels are partially explained by differences in soil moisture and temperature between shrubs and grasses. Respiration rates responded similarly to seasonal transitions regardless of treatment although Ra had a much stronger seasonal response. Across all months changes in respiration rates are explained by changes in soil moisture. However, within wet periods respiration rates increase with temperature. From February to April the soil was wet and respiration levels gradually increased as day time soil temperatures increased. From April onwards absence of precipitation events and rising soil temperatures caused the soils to rapidly dry out. As a result Rt rates declined and gradually converged with Rh levels. As soils dried, grass Ra declined more gradually than shrub Ra. This was contrary to our expectation that shrub roots would respire longer into the dry season because they have deeper roots and can access water. The high late-season levels of respiration observed in the grass community are possibly due to the presence of invasive forbs which have deep tap roots and continue to grow after the grasses have senesced. Conversion from native shrubs to annual invasive grasses increased both Rt and Rh which indicates changes in plant C allocation and decomposition rates of soil C. The continued encroachment of grasses on shrubland has important implications for the future of C storage in this system.

Modelling a demand driven biogas system for production of electricity at peak demand and for production of biomethane at other times.

PubMed

O'Shea, R; Wall, D; Murphy, J D

2016-09-01

Four feedstocks were assessed for use in a demand driven biogas system. Biomethane potential (BMP) assays were conducted for grass silage, food waste, Laminaria digitata and dairy cow slurry. Semi-continuous trials were undertaken for all feedstocks, assessing biogas and biomethane production. Three kinetic models of the semi-continuous trials were compared. A first order model most accurately correlated with gas production in the pulse fed semi-continuous system. This model was developed for production of electricity on demand, and biomethane upgrading. The model examined a theoretical grass silage digester that would produce 435kWe in a continuous fed system. Adaptation to demand driven biogas required 187min to produce sufficient methane to run a 2MWe combined heat and power (CHP) unit for 60min. The upgrading system was dispatched 71min following CHP shutdown. Of the biogas produced 21% was used in the CHP and 79% was used in the upgrading system. Copyright © 2016 Elsevier Ltd. All rights reserved.

Grass Grows, the Cow Eats: A Simple Grazing Systems Model with Emergent Properties

ERIC Educational Resources Information Center

Ungar, Eugene David; Seligman, Noam G.; Noy-Meir, Imanuel

2004-01-01

We describe a simple, yet intellectually challenging model of grazing systems that introduces basic concepts in ecology and systems analysis. The practical is suitable for high-school and university curricula with a quantitative orientation, and requires only basic skills in mathematics and spreadsheet use. The model is based on Noy-Meir's (1975)…

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vogel, John P.

The goal of this project was to apply high-throughput, non-destructive phenotyping (phenomics) to collections of natural variants and induced mutants of the model grass Brachypodium distachyon and characterize a small subset of that material in detail. B. distachyon is well suited to this phenomic approach because its small size and rapid generation time allow researchers to grow many plants under carefully controlled conditions. In addition, the simple diploid genetics, high quality genome sequence and existence of numerous experimental tools available for B. distachyon allow us to rapidly identify genes affecting specific phenotypes. Our phenomic analysis revealed great diversity in biofuel-relevantmore » traits like growth rate, biomass and photosynthetic rate. This clearly demonstrated the feasibility of applying a phenomic approach to the model grass B. distachyon. We also demonstrated the utility of B. distachyon for studying mature root system, something that is virtually impossible to do with biomass crops. We showed tremendous natural variation in root architecture that can potentially be used to design crops with superior nutrient and water harvesting capability. Finally, we demonstrated the speed with which we can link specific genes to specific phenotypes by studying two mutants in detail. Importantly, in both cases, the specific biological lessons learned were grass-specific and could not have been learned from a dicot model system. Furthermore, one of the genes affects cell wall integrity and thus may be a useful target in the context of biomass crop improvement. Ultimately, all this information can be used to accelerate the creation of improved biomass crops.« less

7 CFR 1437.310 - Sea grass and sea oats.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 10 2011-01-01 2011-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss... paragraphs (c) through (h) of this section, except to the extent that similar provisions apply to claims...

7 CFR 1437.310 - Sea grass and sea oats.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 10 2010-01-01 2010-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value loss... paragraphs (c) through (h) of this section, except to the extent that similar provisions apply to claims...

26 CFR 56.4911-2 - Lobbying expenditures, direct lobbying communications, and grass roots lobbying communications.

Code of Federal Regulations, 2010 CFR

2010-04-01

... direct and grass roots lobbying. The expenditure test election under section 501(h) is assumed to be in... communications, and grass roots lobbying communications. 56.4911-2 Section 56.4911-2 Internal Revenue INTERNAL... CHARITY EXCISE TAXES § 56.4911-2 Lobbying expenditures, direct lobbying communications, and grass roots...

26 CFR 56.4911-2 - Lobbying expenditures, direct lobbying communications, and grass roots lobbying communications.

Code of Federal Regulations, 2011 CFR

2011-04-01

... direct and grass roots lobbying. The expenditure test election under section 501(h) is assumed to be in... communications, and grass roots lobbying communications. 56.4911-2 Section 56.4911-2 Internal Revenue INTERNAL... CHARITY EXCISE TAXES § 56.4911-2 Lobbying expenditures, direct lobbying communications, and grass roots...

40 CFR 180.361 - Pendimethalin; tolerances for residues.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., pome, group 11 0.10 Fruit, stone, group 12 0.10 Garlic 0.1 Grape 0.1 Grass forage, fodder, and hay crop group 17, forage 20 Grass forage, fodder, and hay crop group 17, hay 13 Grass forage, fodder, and hay... specified in the table. Commodity Parts per million Expiration/revocation date Bermuda grass, forage 25 12...

76 FR 31485 - Bromoxynil; Pesticide Tolerances

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-01

... million (ppm) to 0.2 ppm; grass, hay from 3.0 ppm to 5.0 ppm; and grass, forage from 3.0 ppm to 18 ppm... increased as a result of the proposed changes to the use patterns for sorghum and grasses. The reasons for... Assessment for Amended Uses on Grass Grown for Seed, Conservation Reserve Program Areas, and Grain Sorghum...

76 FR 61307 - Endangered and Threatened Wildlife and Plants; 12-Month Finding on a Petition To List Calopogon...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-04

... 12-month finding on a petition to list Calopogon oklahomensis (Oklahoma grass pink orchid) under the... the Oklahoma grass pink or prairie grass pink, is a terrestrial species of orchid (family Orchidaceae... the genus Calopogon, a group of terrestrial orchids known as grass pinks. The number of species...

40 CFR 180.361 - Pendimethalin; tolerances for residues.

Code of Federal Regulations, 2011 CFR

2011-07-01

..., pome, group 11 0.10 Fruit, stone, group 12 0.10 Garlic 0.1 Grape 0.1 Grass forage, fodder, and hay crop group 17, forage 20 Grass forage, fodder, and hay crop group 17, hay 13 Grass forage, fodder, and hay... specified in the table. Commodity Parts per million Expiration/revocation date Bermuda grass, forage 25 12...

75 FR 51204 - Endangered and Threatened Wildlife and Plants; 12-Month Finding on a Petition To Remove the...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-19

... grasses than for a vegetation community dominated by grasses (O'Farrell and Clark 1987, p. 10; O'Farrell... than by annual grasses, as annual forbs provide critical greens in the spring, furnish temporary cover... are capable of supporting annual grasses mixed with forbs and shrub species. Genetics Genetic...

78 FR 78746 - Extension of Tolerances for Emergency Exemptions (Multiple Chemicals)

Federal Register 2010, 2011, 2012, 2013, 2014

2013-12-27

... FIFRA section 18 the use of fenoxaprop-ethyl on grasses grown for seed for control of grassy weeds in... the stoichiometric equivalent of fenoxaprop-ethyl, in or on grass forage and grass hay at 0.05 ppm for... has authorized under FIFRA section 18 the use of bifenazate on timothy grass for control of spider...

355, 532, and 1064 nm picosecond laser interaction with grass tissues

NASA Astrophysics Data System (ADS)

Kim, Jaehun; Ki, Hyungson

2012-12-01

In this article, we investigate how 355, 532, and 1064 nm picosecond lasers interact with grass tissues. We have identified five interaction regimes, and based on this classification, interaction maps have been constructed from a systematic experiment. The optical properties of light absorbing grass constituents are studied theoretically in order to understand how and how much light is absorbed by grass tissues. Scanning electron microscopy and optical microscopy are employed for observing morphological and structural changes of grass tissues. To the best of the authors' knowledge, this is the first investigation into laser interaction with plant leaves and reveals some fundamental findings regarding how a laser interacts with grass tissues and how plant leaves can be processed using lasers.

Seteria viridis as a model for pathogen resistance in the Poaceae

USDA-ARS?s Scientific Manuscript database

Seteria viridis is an effective model system for functional genetics in the C4 Poaceae grasses, which include important crops like maize, sorghum, and sugar cane. The small genome size, short stature, rapid life cycle, and the availability of genetic transformation protocols, make Seteria an attract...

Grazing in an uncertain environment: Modeling the trade-off between production and robustness

USDA-ARS?s Scientific Manuscript database

Concern with the environmental, economic, and social impacts of the post-WWII model of agricultural intensification has led to renewed interest in grazing as a feeding strategy for temperate livestock farming systems. Putting the culture and utilization of grass at the core of livestock feeding not ...

Brachypodium seed - a potential model for studying grain development of cereal crops

USDA-ARS?s Scientific Manuscript database

Seeds of small grains are important resources for human and animal food. The understanding of seed biology is essential for crop improvement by increasing grain yields and nutritional value. In the last decade, Brachypodium distachyon has been developed as a model plant for temperate cereal grasses...

Modeling Soil Organic Carbon in a Semiarid Region of Kazakhstan Using EPIC

USDA-ARS?s Scientific Manuscript database

Inappropriate land use and soil mismanagement produced wide-scale soil and environmental degradation to the short-grass steppe ecosystem in the semiarid region of Kazakhstan. We used the Environmental Policy Integrated Climate (EPIC) model to study long-term impacts of land use changes and soil mana...

A DIURNAL REFLECTANCE MODEL USING GRASS: SURFACE-SUBSTRATE INTERACTION AND INVERSE SOLUTION

EPA Science Inventory

The accuracy of using remote sensing data from earth orbiting radiometers can be improved by using a model that helps to separate the green-fraction in a canopy reflectance () from thatch and soil background, accounts for their diurnal changes, and inverts to a solution of a biop...

APEX simulation: environmental benefits of agroforestry and grass buffers on corn-soybean watersheds

USDA-ARS?s Scientific Manuscript database

The Agricultural Policy Environmental Extender (APEX) model has the ability to simulate the effects of vegetative filter strips on runoff and pollutant loadings from agricultural watersheds. The objectives of this study were to calibrate and validate the APEX model for three adjacent watersheds and...

AN EVALUATION OF THREE EMPIRICAL AIR-TO-LEAF MODELS FOR POLYCHLORINATED DIBENZO-P-DIOXINS AND DIBENZOFURANS

EPA Science Inventory

Three empirical air-to-leaf models for estimating grass concentrations of polychlorinated dibenzo-p-dioxins and dibenzofurans (abbreviated dioxins and furans) from air concentrations of these compounds are described and tested against two field data sets. All are empirical in th...

Sialylated Fetuin-A as a candidate predictive biomarker for successful grass pollen allergen immunotherapy.

PubMed

Caillot, Noémie; Bouley, Julien; Jain, Karine; Mariano, Sandrine; Luce, Sonia; Horiot, Stéphane; Airouche, Sabi; Beuraud, Chloé; Beauvallet, Christian; Devillier, Philippe; Chollet-Martin, Sylvie; Kellenberger, Christine; Mascarell, Laurent; Chabre, Henri; Batard, Thierry; Nony, Emmanuel; Lombardi, Vincent; Baron-Bodo, Véronique; Moingeon, Philippe

2017-09-01

Eligibility to immunotherapy is based on the determination of IgE reactivity to a specific allergen by means of skin prick or in vitro testing. Biomarkers predicting the likelihood of clinical improvement during immunotherapy would significantly improve patient selection. Proteins were differentially assessed by using 2-dimensional differential gel electrophoresis and label-free mass spectrometry in pretreatment sera obtained from clinical responders and nonresponders within a cohort of 82 patients with grass pollen allergy receiving sublingual immunotherapy or placebo. Functional studies of Fetuin-A (FetA) were conducted by using gene silencing in a mouse asthma model, human dendritic cell in vitro stimulation assays, and surface plasmon resonance. Analysis by using quantitative proteomics of pretreatment sera from patients with grass pollen allergy reveals that high levels of O-glycosylated sialylated FetA isoforms are found in patients exhibiting a strong decrease in rhinoconjunctivitis symptoms after sublingual immunotherapy. Although FetA is involved in numerous inflammatory conditions, its potential role in allergy is unknown. In vivo silencing of the FETUA gene in BALB/c mice results in a dramatic upregulation of airway hyperresponsiveness, lung resistance, and T H 2 responses after allergic sensitization to ovalbumin. Both sialylated and nonsialytated FetA bind to LPS, but only the former synergizes with LPS and grass pollen or mite allergens to enhance the Toll-like receptor 4-mediated proallergic properties of human dendritic cells. As a reflection of the patient's inflammatory status, pretreatment levels of sialylated FetA in the blood are indicative of the likelihood of clinical responses during grass pollen immunotherapy. Copyright © 2016 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

Changes in southern Piedmont grassland community structure and nutritive quality with future climate scenarios of elevated tropospheric ozone and altered rainfall patterns.

PubMed

Gilliland, N J; Chappelka, A H; Muntifering, R B; Ditchkoff, S S

2016-01-01

Forage species common to the southern USA Piedmont region, Lolium arundinacea, Paspalum dilatatum, Cynodon dactylon and Trifolium repens, were established in a model pasture system to test the future climate change scenario of increasing ozone exposure in combination with varying rainfall amounts on community structure and nutritive quality. Forages were exposed to two levels of ozone [ambient (non-filtered; NF) and twice ambient (2×) concentrations] with three levels of precipitation (average or ±20% of average) in modified open-top chambers (OTCs) from June to September 2009. Dry matter (DM) yield did not differ over the growing season between forage types, except in primary growth grasses where DM yield was higher in 2× than NF treatment. Primary growth clover decreased in nutritive quality in 2× ozone because of increased concentrations of neutral detergent fibre (NDF), acid detergent fibre (ADF) and acid detergent lignin (ADL). Re-growth clover exhibited the largest decrease in nutritive quality, whereas grasses were not adversely affected in 2× ozone. Re-growth grasses responded positively to 2× ozone exposure, as indicated in increased relative food value (RFV) and percentage crude protein (CP) than NF-exposed re-growth grasses. Effects of precipitation were not significant over the growing season for primary or re-growth forage, except in primary growth grasses where DM yield was higher in chambers with above average (+20%) precipitation. Total canopy cover was significantly higher over the growing season in chambers receiving above average precipitation, but no significant effects were observed with ozone. Results indicate shifts in plant community structure and functioning related to mammalian herbivore herbivory in future climate change scenarios. © 2015 German Botanical Society and The Royal Botanical Society of the Netherlands.

Genetic Resources for Maize Cell Wall Biology1[C][W][OA

PubMed Central

Penning, Bryan W.; Hunter, Charles T.; Tayengwa, Reuben; Eveland, Andrea L.; Dugard, Christopher K.; Olek, Anna T.; Vermerris, Wilfred; Koch, Karen E.; McCarty, Donald R.; Davis, Mark F.; Thomas, Steven R.; McCann, Maureen C.; Carpita, Nicholas C.

2009-01-01

Grass species represent a major source of food, feed, and fiber crops and potential feedstocks for biofuel production. Most of the biomass is contributed by cell walls that are distinct in composition from all other flowering plants. Identifying cell wall-related genes and their functions underpins a fundamental understanding of growth and development in these species. Toward this goal, we are building a knowledge base of the maize (Zea mays) genes involved in cell wall biology, their expression profiles, and the phenotypic consequences of mutation. Over 750 maize genes were annotated and assembled into gene families predicted to function in cell wall biogenesis. Comparative genomics of maize, rice (Oryza sativa), and Arabidopsis (Arabidopsis thaliana) sequences reveal differences in gene family structure between grass species and a reference eudicot species. Analysis of transcript profile data for cell wall genes in developing maize ovaries revealed that expression within families differed by up to 100-fold. When transcriptional analyses of developing ovaries before pollination from Arabidopsis, rice, and maize were contrasted, distinct sets of cell wall genes were expressed in grasses. These differences in gene family structure and expression between Arabidopsis and the grasses underscore the requirement for a grass-specific genetic model for functional analyses. A UniformMu population proved to be an important resource in both forward- and reverse-genetics approaches to identify hundreds of mutants in cell wall genes. A forward screen of field-grown lines by near-infrared spectroscopic screen of mature leaves yielded several dozen lines with heritable spectroscopic phenotypes. Pyrolysis-molecular beam mass spectrometry confirmed that several nir mutants had altered carbohydrate-lignin compositions. PMID:19926802

Are Namibian “Fairy Circles” the Consequence of Self-Organizing Spatial Vegetation Patterning?

PubMed Central

Cramer, Michael D.; Barger, Nichole N.

2013-01-01

Causes of over-dispersed barren “fairy circles” that are often surrounded by ca. 0.5 m tall peripheral grasses in a matrix of shorter (ca. 0.2 m tall) grasses in Namibian grasslands remain mysterious. It was hypothesized that the fairy circles are the consequence of self-organizing spatial vegetation patterning arising from resource competition and facilitation. We examined the edaphic properties of fairy circles and variation in fairy circle size, density and landscape occupancy (% land surface) with edaphic properties and water availability at a local scale (<50 km) and with climate and vegetation characteristics at a regional scale. Soil moisture in the barren fairy circles declines from the center towards the periphery and is inversely correlated with soil organic carbon, possibly indicating that the peripheral grass roots access soil moisture that persists into the dry season within fairy circles. Fairy circle landscape occupancy is negatively correlated with precipitation and soil [N], consistent with fairy circles being the product of resource-competition. Regional fairy circle presence/absence is highly predictable using an empirical model that includes narrow ranges of vegetation biomass, precipitation and temperature seasonality as predictor variables, indicating that fairy circles are likely a climate-dependent emergent phenomenon. This dependence of fairy circle occurrence on climate explains why fairy circles in some locations may appear and disappear over time. Fairy circles are only over-dispersed at high landscape occupancies, indicating that inter-circle competition may determine their spacing. We conclude that fairy circles are likely to be an emergent arid-grassland phenomenon that forms as a consequence of peripheral grass resource-competition and that the consequent barren circle may provide a resource-reservoir essential for the survival of the larger peripheral grasses and provides a habitat for fossicking fauna. PMID:23976962

COMPARISON OF THE POPULATIONS OF COMMON WOOD-NYMPH BUTTERFLIES IN BURNED PRAIRIE, UNBURNED PRAIRIE AND OLD FIELD GRASSES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hahn, M.; Walton, R.

2007-01-01

Common wood-nymph butterfl ies are found throughout the United States and Canada. However, not much is known about how they overwinter or their preferences for particular grasses and habitats. In this study, the impact of prairie management plans on the abundance of the wood-nymph population was assessed, as well as the preference of these butterfl ies for areas with native or non-native grasses. The abundance of common wood-nymph butterfl ies was determined using Pollard walks; more common wood-nymph butterfl ies were found in the European grasses than were found in the burned and unburned prairie sites. The majority of themore » vegetation at each of the three sites was identifi ed and documented. Using a 1 X 3 ANOVA analysis, it was determined there were signifi cantly more butterfl ies in the European grasses than in the burned and unburned prairie sites (p < 0.0005). There was no signifi cant difference between the burned and unburned treatments of the prairie on the common wood-nymph population. A multiple variable linear regression model described the effect of temperature and wind speed on the number of observed common wood-nymph butterfl ies per hour (p = 0.026). These preliminary results need to be supplemented with future studies. Quadrat analysis of the vegetation from all three sites should be done to search for a correlation between common wood-nymph butterfl y abundance per hour and the specifi c types or quantity of vegetation at each site. The effect of vegetation height and density on the observer’s visual fi eld should also be assessed.« less

The fate of verocytotoxigenic Escherichia coli C600φ3538(Δvtx2 ::cat) and its vtx2 prophage during grass silage preparation.

PubMed

Nyambe, S; Burgess, C; Whyte, P; O'Kiely, P; Bolton, D

2017-05-01

Silage is grass, preserved by fermentation and used as winter feed for cattle. The impact of a range of current grass silage preparation practices on the survival of Escherichia coli C600φ3538(Δvtx 2 ::cat) and on the induction, release and infectivity of free phage were investigated. Wilted and fresh grass samples, from plots with and without slurry application, were ensiled with or without formic acid. Each treatment combination was inoculated with approximately 6 log 10 CFU per g E. coli C600φ3538(Δvtx 2 ::cat) (donor strain) and E. coli C600::kanamycin R (recipient strain) in test-tube model silos and incubated in the dark at 15°C. The physico-chemical (pH, ammonia, ethanol, lactic acid and volatile fatty acids) and microbiological (total viable counts, TVC, total Enterobacteriaceae counts, TEC, E. coli counts, ECC and lactic acid bacteria, LAB) properties of each fermentation were monitored throughout the experiment as were the concentrations of E. coli C600φ3538(Δvtx 2 ::cat), E. coli C600::kanamycin R , free phage and transductants, using culture and PCR-based methods. Over the course of the experiment the pH of the grass samples typically decreased by 2 pH units. TVC, TEC and ECC decreased by up to 2·3, 6·4 and 6·2 log 10 CFU per g, respectively, while the LAB counts remained relatively stable at 5·2-7·1 log 10 CFU per g. Both donor and recipient strains decreased by approximately 5 log 10 CFU per g. Free phages were detected in all treatments and transductants were detected and confirmed by PCR in the silo containing wilted grass, pretreated with slurry and ensiled without formic acid. Verocytotoxigenic E. coli may survive the ensiling process and the conditions encountered are sufficient to induce vtx 2 bacteriophage leading to low levels of phage-mediated vtx 2 gene transfer. These studies suggest that the ensiling of grass may create an environment which facilitates the emergence of new verocytotoxigenic E. coli. © 2017 The Society for Applied Microbiology.

76 FR 39888 - Endangered Species Recovery Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-07

... (Bakersfield cactus); Orcuttia pilosa (hairy orcutt grass); Orcuttia viscida (Sacramento orcutt grass...); Tuctoria mucronata (Solano grass). Permit No. TE-45778A Applicant: Ellis Ecological Services Incorporated...

Relevance of Allergenic Sensitization to Cynodon dactylon and Phragmites communis: Cross-reactivity With Pooideae Grasses.

PubMed

López-Matas, M A; Moya, R; Cardona, V; Valero, A; Gaig, P; Malet, A; Viñas, M; García-Moral, A; Labrador, M; Alcoceba, E; Ibero, M; Carnés, J

The homologous group of sweet grasses belongs to the Pooideae subfamily, but grass pollen species from other subfamilies can also cause allergy, such as Cynodon dactylon (Chloridoideae) and Phragmites communis (Arundinoideae). C dactylon and P communis have not been included in the sweet grasses homologous group because of their low cross-reactivity with other grasses. The aims of this study were to investigate the profile of sensitization to C dactylon and P communis in patients sensitized to grasses and to analyze cross-reactivity between these 2 species and temperate grasses. Patients were skin prick tested with a grass mixture (GM). Specific IgE to GM, C dactylon, P communis, Cyn d 1, and Phl p 1 was measured by ImmunoCAP. A pool of sera was used for the immunoblot assays. Cross-reactivity was studied by ELISA and immunoblot inhibition. Thirty patients had sIgE to GM. Twenty-four (80%) had positive results for C dactylon, 27 (90%) for P communis, 22 (73.3%) for nCyn d 1, and 92.9% for rPhl p 1. Bands were detected in the 3 extracts by immunoblot. Inhibition of GM was not observed with C dactylon or P communis by immunoblot or ELISA inhibition. When C dactylon or P communis were used in the solid phase, GM produced almost complete inhibition. Eighty percent of patients sensitized to grasses were also sensitized to C dactylon and 90% were sensitized to P communis. Sensitization to these species seems to be induced by allergens different to those in sweet grasses.

Excreting and non-excreting grasses exhibit different salt resistance strategies

PubMed Central

Moinuddin, Muhammad; Gulzar, Salman; Ahmed, Muhammad Zaheer; Gul, Bilquees; Koyro, Hans-Werner; Khan, Muhammad Ajmal

2014-01-01

The combination of traits that makes a plant successful under saline conditions varies with the type of plant and its interaction with the environmental conditions. Knowledge about the contribution of these traits towards salt resistance in grasses has great potential for improving the salt resistance of conventional crops. We attempted to identify differential adaptive response patterns of salt-excreting versus non-excreting grasses. More specifically, we studied the growth, osmotic, ionic and nutrient (carbon/nitrogen) relations of two salt-excreting (Aeluropus lagopoides and Sporobolus tremulus) and two non-excreting (Paspalum paspalodes and Paspalidium geminatum) perennial C4 grasses under non-saline and saline (0, 200 and 400 mM NaCl) conditions. Growth and relative growth rate decreased under saline conditions in the order P. geminatum > S. tremulus = A. lagopoides > P. paspalodes. The root-to-shoot biomass allocation was unaffected in salt-excreting grasses, increased in P. paspalodes but decreased in P. geminatum. Salt-excreting grasses had a higher shoot/root Na+ ratio than non-excreting grasses. K+, Ca2+ and Mg2+ homoeostasis remained undisturbed among test grasses possibly through improved ion selectivity with rising substrate salinity. Salt-excreting grasses increased leaf succulence, decreased ψs and xylem pressure potential, and accumulated proline and glycinebetaine with increasing salinity. Higher salt resistance of P. paspalodes could be attributed to lower Na+ uptake, higher nitrogen-use efficiency and higher water-use efficiency among the test species. However, P. geminatum was unable to cope with salt-induced physiological drought. More information is required to adequately document the differential strategies of salt resistance in salt-excreting and non-excreting grasses. PMID:24996428

First direct confirmation of grass carp spawning in a Great Lakes tributary

USGS Publications Warehouse

Embke, Holly S.; Kocovsky, Patrick M.; Richter, Catherine A.; Pritt, Jeremy J.; Christine M. Mayer,; Qian, Song

2016-01-01

Grass carp (Ctenopharyngodon idella), an invasive species of Asian carp, has been stocked for many decades in the United States for vegetation control. Adult individuals have been found in all of the Great Lakes except Lake Superior, but no self-sustaining populations have yet been identified in Great Lakes tributaries. In 2012, a commercial fisherman caught four juvenile diploid grass carp in the Sandusky River, a major tributary to Lake Erie. Otolith microchemistry and the capture location of these fish permitted the conclusion that they were most likely produced in the Sandusky River. Due to this finding, we sampled ichthyoplankton using paired bongo net tows and larval light traps during June–August of 2014 and 2015 to determine if grass carp are spawning in the Sandusky River. From the samples collected in 2015, we identified and staged eight eggs that were morphologically consistent with grass carp. Five eggs were confirmed as grass carp using quantitative Polymerase Chain Reaction for a grass carp-specific marker, while the remaining three were retained for future analysis. Our finding confirms that grass carp are naturally spawning in this Great Lakes tributary. All eggs were collected during high-flow events, either on the day of peak flow or 1–2 days following peak flow, supporting an earlier suggestion that high flow conditions favor grass carp spawning. The next principal goal is to identify the spawning and hatch location(s) for the Sandusky River. Predicting locations and conditions where grass carp spawning is most probable may aid targeted management efforts.

Relationships between in situ protein degradability and grass developmental morphology.

PubMed

Mitchell, R B; Redfearn, D D; Moser, L E; Grant, R J; Moore, K J; Kirch, B H

1997-06-01

The objective of this research was to determine the relationships between the morphological development and in situ ruminally degradable protein (RDP), ruminally undegradable protein (RUP), and microbial protein of two cool season grasses (intermediate wheatgrass and smooth bromegrass) and two warm season grasses (switchgrass and big bluestem). The initial growth of grass tillers grown near Mead, Nebraska was clipped at ground level six times during the 1992 growing season and morphologically classified. Mean stage was calculated. Forage was ground to pass a 2-mm screen and was incubated in ruminally fistulated steers for 16 h. The RUP was adjusted for microbial protein and acid detergent insoluble N. The mean stage of cool season grasses was higher than that of warm season grasses throughout the growing season. The RDP decreased as plant maturity increased for all species. The RUP expressed as a percentage of crude protein for the cool season grasses was lower than that for warm season grasses. The RUP for intermediate wheatgrass, smooth bromegrass, and switchgrass remained constant across maturities, but RUP for big bluestem decreased as maturity increased. Microbial augmentation of RUP decreased as crude protein decreased in all species. The RUP corrected for acid detergent insoluble N and microbial protein was relatively constant across plant maturities. The quantification of RUP across a range of plant maturities provided information for incorporating RUP content of forage grasses into the diets of animals.

A proteomic style approach to characterize a grass mix product reveals potential immunotherapeutic benefit.

PubMed

Bullimore, Alan; Swan, Nicola; Alawode, Wemimo; Skinner, Murray

2011-09-01

Grass allergy immunotherapies often consist of a mix of different grass extracts, each containing several proteins of different physiochemical properties; however, the subtle contributions of each protein are difficult to elucidate. This study aimed to identify and characterize the group 1 and 5 allergens in a 13 grass extract and to standardize the extraction method. The grass pollens were extracted in isolation and pooled and also in combination and analyzed using a variety of techniques including enzyme-linked immunosorbent assay, liquid chromatog-raphy-mass spectrometry, and sodium dodecyl sulfate-polyacrylam-ide gel electrophoresis. Gold-staining and IgE immunoblotting revealed a high degree of homology of protein bands between the 13 species and the presence of a densely stained doublet at 25-35 kD along with protein bands at approximately 12.5, 17, and 50 kD. The doublet from each grass species demonstrated a high level of group 1 and 5 interspecies homology. However, there were a number of bands unique to specific grasses consistent with evolutionary change and indicative that a grass mix immunotherapeutic could be considered broad spectrum. Sodium dodecyl sulfate-polyacrylamide gel electro-phoresis and IgE immunoblotting showed all 13 grasses share a high degree of homology, particularly in terms of group 1 and 5 allergens. IgE and IgG enzyme-linked immunosorbent assay potencies were shown to be independent of extraction method.

Vigor and persistence of birdsfoot trefoil (Lotus corniculatus L.) populations selected with or without an orchardgrass (Dactylis glomerata L.) companion evaluated in grass sod

USDA-ARS?s Scientific Manuscript database

Forage legumes are often grown in mixtures with grass for grazing or harvested for hay or silage. Forage legume breeders often debate the necessity of incorporating grass competition into the breeding process, particularly when bred varieties will be utilized in mixture with grass. To address the va...

Archeological Test Excavations at Eight Sites in the Lake Sharpe Project Area of Hughes, Lyman, and Stanley Counties, South Dakota 1987. Appendixes A-O

DTIC Science & Technology

1990-04-01

24 Sedgeor Grass Fam ily (Cyperaceae or Poaceae ) ............................................................. 26 Beeweed (Cleome...28 Grass Fam ily ( Poaceae ...Beeweed seed I Cyperaceae or Poaceae Sedge or Grass Family stem i 315 Cyperaceae or Poaceae Sedge or Grass Family stem 1 Z_ _ mays Corn cob 3 316

Environmental Assessment to Construct a FAMCAMP, Sheppard Air Force Base, Texas

DTIC Science & Technology

2013-01-05

Bennuda (Cynodon dactylon), buffalo grass (Buchloe dactyloides), Texas wintergrass (Stipa leucotricha), Johnson grass (Sorghum halepense), and...previously disturbed areas within the developed area of the base. The proposed project area is composed of grasses that are periodically mowed including...consist of approved mixtures of grass species. Periodically, herbicide would be applied as necessary to control undesirable plant species. Therefore

Pascagoula Harbor, Mississippi, Feasibility Report on Improvement of the Federal Deep-Draft Navigation Channel. Volume 1. Main Report and Environmental Impact Statement.

DTIC Science & Technology

1985-03-01

cerifera) and stands of Cogongrass, locally known as ’Jap Grass’ ( Imperata cylindrica ) and torpedo grass (Panicum repens). The lower southeastern-most...dominated by wax myrtle and sea myrtle with stands of Cogongrass, locally known as ’Jap Grass’ ( Imperata cylindrica ) and torpedo grass (Panicum repens

Established native perennial grasses out-compete an invasive annual grass regardless of soil water and nutrient availability

Treesearch

Christopher M. McGlone; Carolyn Hull Sieg; Thomas E. Kolb; Ty Nietupsky

2012-01-01

Competition and resource availability influence invasions into native perennial grasslands by nonnative annual grasses such as Bromus tectorum. In two greenhouse experiments we examined the influence of competition, water availability, and elevated nitrogen (N) and phosphorus (P) availability on growth and reproduction of the invasive annual grass B. tectorum and two...

Herbaceous Forage and Selection Patterns by Ungulates across Varying Herbivore Assemblages in a South African Savanna

PubMed Central

Treydte, Anna Christina; Baumgartner, Sabine; Heitkönig, Ignas M. A.; Grant, Catharina C.; Getz, Wayne M.

2013-01-01

Herbivores generally have strong structural and compositional effects on vegetation, which in turn determines the plant forage species available. We investigated how selected large mammalian herbivore assemblages use and alter herbaceous vegetation structure and composition in a southern African savanna in and adjacent to the Kruger National Park, South Africa. We compared mixed and mono-specific herbivore assemblages of varying density and investigated similarities in vegetation patterns under wildlife and livestock herbivory. Grass species composition differed significantly, standing biomass and grass height were almost twice as high at sites of low density compared to high density mixed wildlife species. Selection of various grass species by herbivores was positively correlated with greenness, nutrient content and palatability. Nutrient-rich Urochloa mosambicensis Hack. and Panicum maximum Jacq. grasses were preferred forage species, which significantly differed in abundance across sites of varying grazing pressure. Green grasses growing beneath trees were grazed more frequently than dry grasses growing in the open. Our results indicate that grazing herbivores appear to base their grass species preferences on nutrient content cues and that a characteristic grass species abundance and herb layer structure can be matched with mammalian herbivory types. PMID:24358228

Climate drives shifts in grass reproductive phenology across the western USA

USGS Publications Warehouse

Munson, Seth M.; Long, A. Lexine

2016-01-01

The capacity of grass species to alter their reproductive timing across space and through time can indicate their ability to cope with environmental variability and help predict their future performance under climate change.We determined the long-term (1895–2013) relationship between flowering times of grass species and climate in space and time using herbarium records across ecoregions of the western USA.There was widespread concordance of C3 grasses accelerating flowering time and general delays for C4 grasses with increasing mean annual temperature, with the largest changes for annuals and individuals occurring in more northerly, wetter ecoregions. Flowering time was delayed for most grass species with increasing mean annual precipitation across space, while phenology–precipitation relationships through time were more mixed.Our results suggest that the phenology of most grass species has the capacity to respond to increases in temperature and altered precipitation expected with climate change, but weak relationships for some species in time suggest that climate tracking via migration or adaptation may be required. Divergence in phenological responses among grass functional types, species, and ecoregions suggests that climate change will have unequal effects across the western USA.

Bermuda grass as feedstock for biofuel production: a review.

PubMed

Xu, Jiele; Wang, Ziyu; Cheng, Jay J

2011-09-01

Bermuda grass is a promising feedstock for the production of fuel ethanol in the Southern United States. This paper presents a review of the significant amount of research on the conversion of Bermuda grass to ethanol and a brief discussion on the factors affecting the biomass production in the field. The biggest challenge of biomass conversion comes from the recalcitrance of lignocellulose. A variety of chemical, physico-chemical, and biological pretreatment methods have been investigated to improve the digestibility of Bermuda grass with encouraging results reported. The subsequent enzymatic hydrolysis and fermentation steps have also been extensively studied and effectively optimized. It is expected that the development of genetic engineering technologies for the grass and fermenting organisms has the potential to greatly improve the economic viability of Bermuda grass-based fuel ethanol production systems. Other energy applications of Bermuda grass include anaerobic digestion for biogas generation and pyrolysis for syngas production. Copyright © 2011 Elsevier Ltd. All rights reserved.

Allometric Models for Predicting Aboveground Biomass and Carbon Stock of Tropical Perennial C 4 Grasses in Hawaii

DOE PAGES

Youkhana, Adel H.; Ogoshi, Richard M.; Kiniry, James R.; ...

2017-05-02

Biomass is a promising renewable energy option that provides a more environmentally sustainable alternative to fossil resources by reducing the net flux of greenhouse gasses to the atmosphere. Yet, allometric models that allow the prediction of aboveground biomass (AGB), biomass carbon (C) stock non-destructively have not yet been developed for tropical perennial C 4 grasses currently under consideration as potential bioenergy feedstock in Hawaii and other subtropical and tropical locations. The objectives of this study were to develop optimal allometric relationships and site-specific models to predict AGB, biomass C stock of napiergrass, energycane, and sugarcane under cultivation practices for renewablemore » energy and validate these site-specific models against independent data sets generated from sites with widely different environments. Several allometric models were developed for each species from data at a low elevation field on the island of Maui, Hawaii. A simple power model with stalk diameter (D) was best related to AGB and biomass C stock for napiergrass, energycane, and sugarcane, (R 2 = 0.98, 0.96, and 0.97, respectively). The models were then tested against data collected from independent fields across an environmental gradient. For all crops, the models over-predicted AGB in plants with lower stalk D, but AGB was under-predicted in plants with higher stalk D. The models using stalk D were better for biomass prediction compared to dewlap H (Height from the base cut to most recently exposed leaf dewlap) models, which showed weak validation performance. Although stalk D model performed better, however, the mean square error (MSE)-systematic was ranged from 23 to 43 % of MSE for all crops. A strong relationship between model coefficient and rainfall was existed, although these were irrigated systems; suggesting a simple site-specific coefficient modulator for rainfall to reduce systematic errors in water-limited areas. These allometric equations provide a tool for farmers in the tropics to estimate perennial C4 grass biomass and C stock during decision-making for land management and as an environmental sustainability indicator within a renewable energy system.« less

Feature discrimination/identification based upon SAR return variations

NASA Technical Reports Server (NTRS)

Rasco, W. A., Sr.; Pietsch, R.

1978-01-01

A study of the statistics of The look-to-look variation statistics in the returns recorded in-flight by a digital, realtime SAR system are analyzed. The determination that the variations in the look-to-look returns from different classes do carry information content unique to the classes was illustrated by a model based on four variants derived from four look in-flight SAR data under study. The model was limited to four classes of returns: mowed grass on a athletic field, rough unmowed grass and weeds on a large vacant field, young fruit trees in a large orchard, and metal mobile homes and storage buildings in a large mobile home park. The data population in excess of 1000 returns represented over 250 individual pixels from the four classes. The multivariant discriminant model operated on the set of returns for each pixel and assigned that pixel to one of the four classes, based on the target variants and the probability distribution function of the four variants for each class.

Robust biological nitrogen fixation in a model grass-bacterial association.

PubMed

Pankievicz, Vânia C S; do Amaral, Fernanda P; Santos, Karina F D N; Agtuca, Beverly; Xu, Youwen; Schueller, Michael J; Arisi, Ana Carolina M; Steffens, Maria B R; de Souza, Emanuel M; Pedrosa, Fábio O; Stacey, Gary; Ferrieri, Richard A

2015-03-01

Nitrogen-fixing rhizobacteria can promote plant growth; however, it is controversial whether biological nitrogen fixation (BNF) from associative interaction contributes to growth promotion. The roots of Setaria viridis, a model C4 grass, were effectively colonized by bacterial inoculants resulting in a significant enhancement of growth. Nitrogen-13 tracer studies provided direct evidence for tracer uptake by the host plant and incorporation into protein. Indeed, plants showed robust growth under nitrogen-limiting conditions when inoculated with an ammonium-excreting strain of Azospirillum brasilense. (11)C-labeling experiments showed that patterns in central carbon metabolism and resource allocation exhibited by nitrogen-starved plants were largely reversed by bacterial inoculation, such that they resembled plants grown under nitrogen-sufficient conditions. Adoption of S. viridis as a model should promote research into the mechanisms of associative nitrogen fixation with the ultimate goal of greater adoption of BNF for sustainable crop production. © 2015 The Authors The Plant Journal © 2015 John Wiley & Sons Ltd.

Estimating Grass-Soil Bioconcentration of Munitions Compounds from Molecular Structure.

PubMed

Torralba Sanchez, Tifany L; Liang, Yuzhen; Di Toro, Dominic M

2017-10-03

A partitioning-based model is presented to estimate the bioconcentration of five munitions compounds and two munition-like compounds in grasses. The model uses polyparameter linear free energy relationships (pp-LFERs) to estimate the partition coefficients between soil organic carbon and interstitial water and between interstitial water and the plant cuticle, a lipid-like plant component. Inputs for the pp-LFERs are a set of numerical descriptors computed from molecular structure only that characterize the molecular properties that determine the interaction with soil organic carbon, interstitial water, and plant cuticle. The model is validated by predicting concentrations measured in the whole plant during independent uptake experiments with a root-mean-square error (log predicted plant concentration-log observed plant concentration) of 0.429. This highlights the dominant role of partitioning between the exposure medium and the plant cuticle in the bioconcentration of these compounds. The pp-LFERs can be used to assess the environmental risk of munitions compounds and munition-like compounds using only their molecular structure as input.

Foraminifera and the ecology of sea grass communities since the late Cretaceous

NASA Astrophysics Data System (ADS)

Hart, Malcolm; Smart, Christopher; Jagt, John

2016-04-01

Sea grasses are marine angiosperms (plants) that, in the late Cretaceous, migrated from the land into shallow-water marine environments. They represent a distinct, but fragile, marine habitat and sea grass meadows are often regarded as biodiversity hot-spots with a range of species (including fish, sea horses and cuttlefish) using them as nurseries for their young. Foraminifera are often found associated with sea grass meadows, with the associated taxa reflecting both the environment and palaeolatitude. In the tropics and sub-tropics, miliolid foraminifera dominate (e.g., Peneroplis spp.) as do large discoidal taxa such as Marginopora and Calcarina. In temperate to cool latitudes the assemblage changes to one dominated by smaller benthic taxa, including Elphidium spp. One taxon, Elphidium crispum, is geotropic and is often found - in the summer months - to crowd the fronds of the sea grass. In the Gulpen and Maastricht formations of the Maastricht area (The Netherlands and Belgium) sea grass fossils (both fronds and rhizomes) have been recorded in association with assemblages of both larger and smaller benthic foraminifera (Hart et al., 2016). Some of the large discoidal forms (e.g., Omphalocyclus and Orbitoides/Lepidorbitoides) and the distinctive Siderolites are associated with these sea grass fossils and are suggestive of the modern sea grass communities of sub-tropical areas. While earlier records were of relatively isolated sea grasses, in September/October 2015 surfaces with abundant sea grasses were found that are suggestive of complete 'meadows'. Preservation of some silicified rhizomes indicates that silicification must have been very rapid, before any degradation or compaction of the delicate tissues. The presence of sea grass fossils and their associated benthic foraminifera is indicative of a clear, shallow-water seaway, with a maximum depth of 15-20 m. The reported variations in sea level during the latest Cretaceous cannot, therefore, have been very large as such a change in water depth would have been disastrous to such a fragile ecosystem. The fossil record of sea grasses in the Cenozoic is relatively limited, though there are some assemblages of benthic foraminifera that are suggestive of their presence, despite the lack of plant fossils. Hart, M.B., FitzPatrick, M.E.J. & Smart, C.W. 2016. The Cretaceous/Paleogene boundary: Foraminifera, sea grasses, sea level change and sequence stratigraphy. Palaeogeography, Palaeoclimatology, Palaeoecology, 441, 420-429.

Soils conditioned by native vegetation and by the exotic invasive annual grass Bromus tectorum: do a native perennial and two exotic grasses sense the substrates similarly

USDA-ARS?s Scientific Manuscript database

Invasion by the exotic annual grass Bromus tectorum often increases soil nutrient availability. It is unclear, however, if other grasses benefit from this higher nutrient status. Soil from three sites in the northern Great Basin U.S.A. conditioned by B. tectoruminvasion (BTCS=B. tectorum conditioned...

Range 74 Target Complexes, Environmental Assessment, Nevada Test and Training Range, Nevada

DTIC Science & Technology

2007-07-01

Sagebrush-Grass Community The sagebrush-grass community (Photograph 3-3) is primarily dominated by big sagebrush ( Artemisia tridentata), but other...sagebrush species, such as black sagebrush ( Artemisia nova) can also be dominant. This community is often located in areas with greater...Sagebrush-Grass Community The sagebrush-grass community is primarily dominated by big sagebrush ( Artemisia tridentata), but other sagebrush species

Effects of neighbor species and distance on 2- and 4-year survival of Lehmann lovegrass and native grasses

Treesearch

Sharon H. Biedenbender; Mitchel P. McClaran; Bruce A. Roundy

2003-01-01

The relationship between Lehmann lovegrass, an invasive African grass, and native Southwestern grasses has not been fully determined. The first purpose of this study was to compare the survival of Lehmann lovegrass with two native grasses (plains lovegrass and Arizona cottontop) seeded on the Santa Rita Experimental Range in southeast Arizona in 1994. One year after...

Investigation of the Acoustics of Marine Sediments Using an Impedance Tube

DTIC Science & Technology

2008-09-30

acoustic properties of three gulf-coast species, Thalassia testudinum (turtle grass), Syringodium filiforme (manatee grass), and Halodule wrightii...effective medium. A typical result for the species Thalassia testudinum (turtle grass) is shown in Fig. 9. The two curves show plant volume fraction...the Thalassia testudinum (turtle grass) rhizomes (underground root structures) and the leaves and rhizomes of the other two species tested

A New Coherent Science Content Storyline Astronomy Course for Pre-Service Teachers at Penn State

NASA Astrophysics Data System (ADS)

Palma, Christopher; Plummer, Julia; Earth and Space Science Partnership

2016-01-01

The Earth and Space Science Partnership (ESSP) is a collaboration among Penn State scientists, science educators and seven school districts across Pennsylvania. One of the ESSP goals has been to provide pre-service teachers with new or improved science course offerings at Penn State in the Earth and Space Science domains. In particular, we aim to provide students with opportunities to learn astronomy content knowledge through teaching methods that engage them in investigations where they experience the practices used by astronomers. We have designed a new course that builds on our research into students' ideas about Solar System astronomy (Plummer et al. 2015) and the curriculum our team created for a professional development workshop for in-service teachers (Palma et al. 2013) with this same theme. The course was offered for the first time in the spring 2015 semester. We designed the course using a coherent science content storyline approach (see, e.g., Palma et al. 2014), which requires all of the student investigations to build towards a big idea in science; in this case, we chose the model for formation of our Solar System. The course led pre-service teachers through a series of investigations that model the type of instruction we hope they will adopt in their own classrooms. They were presented with a series of research questions that all tie in to the big idea of Solar System formation, and they were responsible for collecting and interpreting their own data to draw evidence-based conclusions about one aspect of this model. Students in the course were assessed on their astronomy content knowledge, but also on their ability to construct arguments using scientific reasoning to answer astronomy questions. In this poster, we will present descriptions of the investigations, the assessments used, and our preliminary results about how the course led this group of pre-service teachers to improved understanding of astronomy content and the practices astronomers use in their investigations of the Solar System.We gratefully acknowledge support from the NSF MSP program award DUE#0962792.

Cost-effectiveness of feeding strategies to reduce greenhouse gas emissions from dairy farming.

PubMed

Van Middelaar, C E; Dijkstra, J; Berentsen, P B M; De Boer, I J M

2014-01-01

The objective of this paper was to evaluate the cost-effectiveness of 3 feeding strategies to reduce enteric CH4 production in dairy cows by calculating the effect on labor income at the farm level and on greenhouse gas (GHG) emissions at the chain level (i.e., from production of farm inputs to the farm gate). Strategies included were (1) dietary supplementation of an extruded linseed product (56% linseed; 1kg/cow per day in summer and 2kg/cow per day in winter), (2) dietary supplementation of a nitrate source (75% nitrate; 1% of dry matter intake), and (3) reducing the maturity stage of grass and grass silage (grazing at 1,400 instead of 1,700kg of dry matter/ha and harvesting at 3,000 instead of 3,500kg of dry matter/ha). A dairy farm linear programing model was used to define an average Dutch dairy farm on sandy soil without a predefined feeding strategy (reference situation). Subsequently, 1 of the 3 feeding strategies was implemented and the model was optimized again to determine the new economically optimal farm situation. Enteric CH4 production in the reference situation and after implementing the strategies was calculated based on a mechanistic model for enteric CH4 and empirical formulas explaining the effect of fat and nitrate supplementation on enteric CH4 production. Other GHG emissions along the chain were calculated using life cycle assessment. Total GHG emissions in the reference situation added up to 840kg of CO2 equivalents (CO2e) per t of fat- and protein-corrected milk (FPCM) and yearly labor income of €42,605. Supplementation of the extruded linseed product reduced emissions by 9kg of CO2e/t of FPCM and labor income by €16,041; supplementation of the dietary nitrate source reduced emissions by 32kg of CO2e/t of FPCM and labor income by €5,463; reducing the maturity stage of grass and grass silage reduced emissions by 11kg of CO2e/t of FPCM and labor income by €463. Of the 3 strategies, reducing grass maturity was the most cost-effective (€57/t of CO2e compared with €241/t of CO2e for nitrate supplementation and €2,594/t of CO2e for linseed supplementation) and had the greatest potential to be used in practice because the additional costs were low. Copyright © 2014 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Genetics and physiology of cell wall polysaccharides in the model C4 grass, Setaria viridis spp.

PubMed

Ermawar, Riksfardini A; Collins, Helen M; Byrt, Caitlin S; Henderson, Marilyn; O'Donovan, Lisa A; Shirley, Neil J; Schwerdt, Julian G; Lahnstein, Jelle; Fincher, Geoffrey B; Burton, Rachel A

2015-10-02

Setaria viridis has emerged as a model species for the larger C4 grasses. Here the cellulose synthase (CesA) superfamily has been defined, with an emphasis on the amounts and distribution of (1,3;1,4)-β-glucan, a cell wall polysaccharide that is characteristic of the grasses and is of considerable value for human health. Orthologous relationship of the CesA and Poales-specific cellulose synthase-like (Csl) genes among Setaria italica (Si), Sorghum bicolor (Sb), Oryza sativa (Os), Brachypodium distachyon (Bradi) and Hordeum vulgare (Hv) were compared using bioinformatics analysis. Transcription profiling of Csl gene families, which are involved in (1,3;1,4)-β-glucan synthesis, was performed using real-time quantitative PCR (Q-PCR). The amount of (1,3;1,4)-β-glucan was measured using a modified Megazyme assay. The fine structures of the (1,3;1,4)-β-glucan, as denoted by the ratio of cellotriosyl to cellotetraosyl residues (DP3:DP4 ratio) was assessed by chromatography (HPLC and HPAEC-PAD). The distribution and deposition of the MLG was examined using the specific antibody BG-1 and captured using fluorescence and transmission electron microscopy (TEM). The cellulose synthase gene superfamily contains 13 CesA and 35 Csl genes in Setaria. Transcript profiling of CslF, CslH and CslJ gene families across a vegetative tissue series indicated that SvCslF6 transcripts were the most abundant relative to all other Csl transcripts. The amounts of (1,3;1,4)-β-glucan in Setaria vegetative tissues ranged from 0.2% to 2.9% w/w with much smaller amounts in developing grain (0.003% to 0.013% w/w). In general, the amount of (1,3;1,4)-β-glucan was greater in younger than in older tissues. The DP3:DP4 ratios varied between tissue types and across developmental stages, and ranged from 2.4 to 3.0:1. The DP3:DP4 ratios in developing grain ranged from 2.5 to 2.8:1. Micrographs revealing the distribution of (1,3;1,4)-β-glucan in walls of different cell types and the data were consistent with the quantitative (1,3;1,4)-β-glucan assays. The characteristics of the cellulose synthase gene superfamily and the accumulation and distribution of (1,3;1,4)-β-glucans in Setaria are similar to those in other C4 grasses, including sorghum. This suggests that Setaria is a suitable model plant for cell wall polysaccharide biology in C4 grasses.

Development and characterization of a recombinant, hypoallergenic, peptide-based vaccine for grass pollen allergy.

PubMed

Focke-Tejkl, Margarete; Weber, Milena; Niespodziana, Katarzyna; Neubauer, Angela; Huber, Hans; Henning, Rainer; Stegfellner, Gottfried; Maderegger, Bernhard; Hauer, Martina; Stolz, Frank; Niederberger, Verena; Marth, Katharina; Eckl-Dorna, Julia; Weiss, Richard; Thalhamer, Josef; Blatt, Katharina; Valent, Peter; Valenta, Rudolf

2015-05-01

Grass pollen is one of the most important sources of respiratory allergies worldwide. This study describes the development of a grass pollen allergy vaccine based on recombinant hypoallergenic derivatives of the major timothy grass pollen allergens Phl p 1, Phl p 2, Phl p 5, and Phl p 6 by using a peptide-carrier approach. Fusion proteins consisting of nonallergenic peptides from the 4 major timothy grass pollen allergens and the PreS protein from hepatitis B virus as a carrier were expressed in Escherichia coli and purified by means of chromatography. Recombinant PreS fusion proteins were tested for allergenic activity and T-cell activation by means of IgE serology, basophil activation testing, T-cell proliferation assays, and xMAP Luminex technology in patients with grass pollen allergy. Rabbits were immunized with PreS fusion proteins to characterize their immunogenicity. Ten hypoallergenic PreS fusion proteins were constructed, expressed, and purified. According to immunogenicity and induction of allergen-specific blocking IgG antibodies, 4 hypoallergenic fusion proteins (BM321, BM322, BM325, and BM326) representing Phl p 1, Phl p 2, Phl p 5, and Phl p 6 were included as components in the vaccine termed BM32. BM321, BM322, BM325, and BM326 showed almost completely abolished allergenic activity and induced significantly reduced T-cell proliferation and release of proinflammatory cytokines in patients' PBMCs compared with grass pollen allergens. On immunization, they induced allergen-specific IgG antibodies, which inhibited patients' IgE binding to all 4 major allergens of grass pollen, as well as allergen-induced basophil activation. A recombinant hypoallergenic grass pollen allergy vaccine (BM32) consisting of 4 recombinant PreS-fused grass pollen allergen peptides was developed for safe immunotherapy of grass pollen allergy. Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.

Cost-effectiveness of grass allergen tablet (GRAZAX) for the prevention of seasonal grass pollen induced rhinoconjunctivitis - a Northern European perspective.

PubMed

Bachert, C; Vestenbaek, U; Christensen, J; Griffiths, U K; Poulsen, P B

2007-05-01

The prevalence of allergic rhinoconjunctivitis has increased dramatically. Seventeen million people in the United Kingdom, Germany, the Netherlands, Sweden, Denmark, Norway and Finland suffer from grass pollen induced allergic rhinitis. Symptomatic therapy with antihistamines and topical steroids is partially effective but allergen-specific immunotherapy by injection or sublingual routes is superior. The grass allergen tablet (GRAZAX) is a new allergen-specific immunotherapy for home administration. To assess the cost-effectiveness of the grass allergen tablet compared with symptomatic medication in seven Northern European countries. A prospective pharmacoeconomic analysis was carried out alongside a multinational clinical trial. Pooled data on resource use and health outcomes were collected. A societal perspective was adopted, and the analysis had a 9-year time horizon. The outcome measure was Quality Adjusted Life Years (QALYs). The grass allergen tablet was clinically superior to symptomatic treatment, producing statistically significant differences for all efficacy end-points, including the number of QALYs gained - 0.976 vs. 0.947 QALYs gained. There was a significantly higher usage of the rescue medications loratadine and budesonide, and more hours missed from work (production loss), in the symptomatic treatment group. The cost per QALY gained in the grass allergen tablet group was similar in the seven countries (euro 12,930 to euro 18,263 for an annual cost of the grass allergen tablet of euro 1500). The analysis showed that the grass allergen tablet was cost-effective for all countries for an annual treatment cost below euro 2200. The pharmacoeconomic analysis illustrated that allergen-specific immunotherapy with the grass allergen tablet is a cost-effective intervention for the prevention of grass pollen induced rhinoconjunctivitis in Northern European countries, for a tablet price below euro 6. In Germany for example the price of the tablet is euro 2.95 corresponding to a yearly treatment cost of euro 358 - based on a 9-year time horizon.

Positive and negative effects of grass, cattle, and wild herbivores on Acacia saplings in an East African savanna.

PubMed

Riginos, Corinna; Young, Truman P

2007-10-01

Plant-plant interactions can be a complex mixture of positive and negative interactions, with the net outcome depending on abiotic and community contexts. In savanna systems, the effects of large herbivores on tree-grass interactions have rarely been studied experimentally, though these herbivores are major players in these systems. In African savannas, trees often become more abundant under heavy cattle grazing but less abundant in wildlife preserves. Woody encroachment where cattle have replaced wild herbivores may be caused by a shift in the competitive balance between trees and grasses. Here we report the results of an experiment designed to quantify the positive, negative, and net effects of grasses, wild herbivores, and cattle on Acacia saplings in a Kenyan savanna. Acacia drepanolobium saplings under four long-term herbivore regimes (wild herbivores, cattle, cattle + wild herbivores, and no large herbivores) were cleared of surrounding grass or left with the surrounding grass intact. After two years, grass-removal saplings exhibited 86% more browse damage than control saplings, suggesting that grass benefited saplings by protecting them from herbivory. However, the negative effect of grass on saplings was far greater; grass-removal trees accrued more than twice the total stem length of control trees. Where wild herbivores were present, saplings were browsed more and produced more new stem growth. Thus, the net effect of wild herbivores was positive, possibly due to the indirect effects of lower competitor tree density in areas accessible to elephants. Additionally, colonization of saplings by symbiotic ants tracked growth patterns, and colonized saplings experienced lower rates of browse damage. These results suggest that savanna tree growth and woody encroachment cannot be predicted by grass cover or herbivore type alone. Rather, tree growth appears to depend on a variety of factors that may be acting together or antagonistically at different stages of the tree's life cycle.

Get Tough, Get Toxic, or Get a Bodyguard: Identifying Candidate Traits Conferring Belowground Resistance to Herbivores in Grasses

PubMed Central

Moore, Ben D.; Johnson, Scott N.

2017-01-01

Grasses (Poaceae) are the fifth-largest plant family by species and their uses for crops, forage, fiber, and fuel make them the most economically important. In grasslands, which broadly-defined cover 40% of the Earth's terrestrial surface outside of Greenland and Antarctica, 40–60% of net primary productivity and 70–98% of invertebrate biomass occurs belowground, providing extensive scope for interactions between roots and rhizosphere invertebrates. Grasses invest 50–70% of fixed carbon into root construction, which suggests roots are high value tissues that should be defended from herbivores, but we know relatively little about such defenses. In this article, we identify candidate grass root defenses, including physical (tough) and chemical (toxic) resistance traits, together with indirect defenses involving recruitment of root herbivores' natural enemies. We draw on relevant literature to establish whether these defenses are present in grasses, and specifically in grass roots, and which herbivores of grasses are affected by these defenses. Physical defenses could include structural macro-molecules such as lignin, cellulose, suberin, and callose in addition to silica and calcium oxalate. Root hairs and rhizosheaths, a structural adaptation unique to grasses, might also play defensive roles. To date, only lignin and silica have been shown to negatively affect root herbivores. In terms of chemical resistance traits, nitrate, oxalic acid, terpenoids, alkaloids, amino acids, cyanogenic glycosides, benzoxazinoids, phenolics, and proteinase inhibitors have the potential to negatively affect grass root herbivores. Several good examples demonstrate the existence of indirect defenses in grass roots, including maize, which can recruit entomopathogenic nematodes (EPNs) via emission of (E)-β-caryophyllene, and similar defenses are likely to be common. In producing this review, we aimed to equip researchers with candidate root defenses for further research. PMID:28105030

Regional and seasonal variation in airborne grass pollen levels between cities of Australia and New Zealand.

PubMed

Medek, Danielle E; Beggs, Paul J; Erbas, Bircan; Jaggard, Alison K; Campbell, Bradley C; Vicendese, Don; Johnston, Fay H; Godwin, Ian; Huete, Alfredo R; Green, Brett J; Burton, Pamela K; Bowman, David M J S; Newnham, Rewi M; Katelaris, Constance H; Haberle, Simon G; Newbigin, Ed; Davies, Janet M

2016-06-01

Although grass pollen is widely regarded as the major outdoor aeroallergen source in Australia and New Zealand (NZ), no assemblage of airborne pollen data for the region has been previously compiled. Grass pollen count data collected at 14 urban sites in Australia and NZ over periods ranging from 1 to 17 years were acquired, assembled and compared, revealing considerable spatiotemporal variability. Although direct comparison between these data is problematic due to methodological differences between monitoring sites, the following patterns are apparent. Grass pollen seasons tended to have more than one peak from tropics to latitudes of 37°S and single peaks at sites south of this latitude. A longer grass pollen season was therefore found at sites below 37°S, driven by later seasonal end dates for grass growth and flowering. Daily pollen counts increased with latitude; subtropical regions had seasons of both high intensity and long duration. At higher latitude sites, the single springtime grass pollen peak is potentially due to a cooler growing season and a predominance of pollen from C 3 grasses. The multiple peaks at lower latitude sites may be due to a warmer season and the predominance of pollen from C 4 grasses. Prevalence and duration of seasonal allergies may reflect the differing pollen seasons across Australia and NZ. It must be emphasized that these findings are tentative due to limitations in the available data, reinforcing the need to implement standardized pollen-monitoring methods across Australasia. Furthermore, spatiotemporal differences in grass pollen counts indicate that local, current, standardized pollen monitoring would assist with the management of pollen allergen exposure for patients at risk of allergic rhinitis and asthma.

Regional and seasonal variation in airborne grass pollen levels between cities of Australia and New Zealand

PubMed Central

Beggs, Paul J.; Erbas, Bircan; Jaggard, Alison K.; Campbell, Bradley C.; Vicendese, Don; Johnston, Fay H.; Godwin, Ian; Huete, Alfredo R.; Green, Brett J.; Burton, Pamela K.; Bowman, David M. J. S.; Newnham, Rewi M.; Katelaris, Constance H.; Haberle, Simon G.; Newbigin, Ed; Davies, Janet M.

2016-01-01

Although grass pollen is widely regarded as the major outdoor aeroallergen source in Australia and New Zealand (NZ), no assemblage of airborne pollen data for the region has been previously compiled. Grass pollen count data collected at 14 urban sites in Australia and NZ over periods ranging from 1 to 17 years were acquired, assembled and compared, revealing considerable spatiotemporal variability. Although direct comparison between these data is problematic due to methodological differences between monitoring sites, the following patterns are apparent. Grass pollen seasons tended to have more than one peak from tropics to latitudes of 37°S and single peaks at sites south of this latitude. A longer grass pollen season was therefore found at sites below 37°S, driven by later seasonal end dates for grass growth and flowering. Daily pollen counts increased with latitude; subtropical regions had seasons of both high intensity and long duration. At higher latitude sites, the single springtime grass pollen peak is potentially due to a cooler growing season and a predominance of pollen from C3 grasses. The multiple peaks at lower latitude sites may be due to a warmer season and the predominance of pollen from C4 grasses. Prevalence and duration of seasonal allergies may reflect the differing pollen seasons across Australia and NZ. It must be emphasized that these findings are tentative due to limitations in the available data, reinforcing the need to implement standardized pollen-monitoring methods across Australasia. Furthermore, spatiotemporal differences in grass pollen counts indicate that local, current, standardized pollen monitoring would assist with the management of pollen allergen exposure for patients at risk of allergic rhinitis and asthma. PMID:27069303

Silicon, endophytes and secondary metabolites as grass defenses against mammalian herbivores

PubMed Central

Huitu, Otso; Forbes, Kristian M.; Helander, Marjo; Julkunen-Tiitto, Riitta; Lambin, Xavier; Saikkonen, Kari; Stuart, Peter; Sulkama, Sini; Hartley, Sue

2014-01-01

Grasses have been considered to primarily employ tolerance in lieu of defense in mitigating damage caused by herbivory. Yet a number of mechanisms have been identified in grasses, which may deter feeding by grazers. These include enhanced silicon uptake, hosting of toxin-producing endophytic fungi and induction of secondary metabolites. While these mechanisms have been individually studied, their synergistic responses to grazing, as well as their effects on grazers, are poorly known. A field experiment was carried out in 5 × 5 m outdoor enclosures to quantify phytochemical changes of either endophyte-infected (E+) or endophyte-free (E-) meadow fescue (Schedonorus pratensis) in response to medium intensity (corresponding with densities of ca. 1200 voles/ha for 5 weeks during 3 months) or heavy intensity (ca. 1200 voles/ha for 8 weeks during 3 months) grazing by a mammalian herbivore, the field vole (Microtus agrestis). A laboratory experiment was then conducted to evaluate the effects of endophyte infection status and grazing history of the grass diet on vole performance. As predicted, grazing increased foliar silicon content, by up to 13%. Grazing also increased foliar levels of phosphorous and several phenolic compounds, most notably those of the flavonols isorhamnetin-diglycoside and rhamnetin derivative. Silicon concentrations were consistently circa 16% higher in E+ grasses than in E-grasses, at all levels of grazing. Similarly, concentrations of chlorogenic acid derivative were found to be consistently higher in E+ than in E- grasses. Female voles maintained on heavily grazed grasses suffered higher mortality rates in the laboratory than female voles fed ungrazed grass, regardless of endophyte infection status. Our results conclusively demonstrate that, in addition to tolerance, grasses employ multi-tiered, effective defenses against mammalian grazers. PMID:25278951

Non-structural carbohydrate partitioning in grass stems: a target to increase yield stability, stress tolerance, and biofuel production.

PubMed

Slewinski, Thomas L

2012-08-01

A dramatic change in agricultural crops is needed in order to keep pace with the demands of an increasing human population, exponential need for renewable fuels, and uncertain climatic changes. Grasses make up the vast majority of agricultural commodities. How these grasses capture, transport, and store carbohydrates underpins all aspects of crop productivity. Sink-source dynamics within the plant direct how much, where, and when carbohydrates are allocated, as well as determine the harvestable tissue. Carbohydrate partitioning can limit the yield capacity of these plants, thus offering a potential target for crop improvement. Grasses have the ability to buffer this sink-source interaction by transiently storing carbohydrates in stem tissue when production from the source is greater than whole-plant demand. These reserves improve yield stability in grain crops by providing an alternative source when photosynthetic capacity is reduced during the later phases of grain filling, or during periods of environmental and biotic stresses. Domesticated grasses such as sugarcane and sweet sorghum have undergone selection for high accumulation of stem carbohydrates, which serve as the primary sources of sugars for human and animal consumption, as well as ethanol production for fuel. With the enormous expectations placed on agricultural production in the near future, research into carbohydrate partitioning in grasses is essential for maintaining and increasing yields in grass crops. This review highlights the current knowledge of non-structural carbohydrate dynamics in grass stems and discusses the impacts of stem reserves in essential agronomic grasses.

Extraction of silica content from the Cymbopogan citratus (lemon grass) and its performance as reinforcement for polymers

NASA Astrophysics Data System (ADS)

Firdaus, M. Y. Nur; Osman, H.; Metselaar, H. S. C.; Rozyanty, A. R.

2017-07-01

Silica is widely used as sources for adsorption materials, medical additives and fillers in composite and rubber industries. The manufacturing process of commercial silica use in various industries is very expensive and energy extensive. Therefore, agricultural waste material such as lemon grass is seen as a potential alternative silica sources for replacement of commercial silica which is currently available in the industry. In this research, a simple method based on the acid leaching treatment with hydrochloric acid (HCl) was developed to produce purified silica from lemon grass, followed by thermal combustion at 600°C. Acid leaching temperatures of 33, 50, 80 and 110°C were used. The silica content, shape and texture of the lemon grass ash was characterized using scanning electron microcopy -energy-dispersive X-ray (SEM-EDX) analysis. The SEM analysis indicated the presence of tubular-shaped porous aggregates, spherical and fibrous shapes of untreated and treated lemon grass at 33°C to 110 °C. The highest silica content recorded was 73.46% for lemon grass treated at the highest leaching temperature of 110°C. The thermal stability of lemon grass ash was examined by using a thermogravimetric analysis (TGA) instrument. The TGA analysis shows that the untreated and treated lemon grass ash start to decompose at lower temperature (90 to 100°C). Lemon grass treated at the highest leaching temperature 110°C exhibit the highest thermal stability.

The Potential of Cellulosic Ethanol Production from Grasses in Thailand

PubMed Central

Wongwatanapaiboon, Jinaporn; Kangvansaichol, Kunn; Burapatana, Vorakan; Inochanon, Ratanavalee; Winayanuwattikun, Pakorn; Yongvanich, Tikamporn; Chulalaksananukul, Warawut

2012-01-01

The grasses in Thailand were analyzed for the potentiality as the alternative energy crops for cellulosic ethanol production by biological process. The average percentage composition of cellulose, hemicellulose, and lignin in the samples of 18 types of grasses from various provinces was determined as 31.85–38.51, 31.13–42.61, and 3.10–5.64, respectively. The samples were initially pretreated with alkaline peroxide followed by enzymatic hydrolysis to investigate the enzymatic saccharification. The total reducing sugars in most grasses ranging from 500–600 mg/g grasses (70–80% yield) were obtained. Subsequently, 11 types of grasses were selected as feedstocks for the ethanol production by simultaneous saccharification and cofermentation (SSCF). The enzymes, cellulase and xylanase, were utilized for hydrolysis and the yeasts, Saccharomyces cerevisiae and Pichia stipitis, were applied for cofermentation at 35°C for 7 days. From the results, the highest yield of ethanol, 1.14 g/L or 0.14 g/g substrate equivalent to 32.72% of the theoretical values was obtained from Sri Lanka ecotype vetiver grass. When the yields of dry matter were included in the calculations, Sri Lanka ecotype vetiver grass gave the yield of ethanol at 1,091.84 L/ha/year, whereas the leaves of dwarf napier grass showed the maximum yield of 2,720.55 L/ha/year (0.98 g/L or 0.12 g/g substrate equivalent to 30.60% of the theoretical values). PMID:23097596

Know a Baby Who Needs Help? Call ABC.

ERIC Educational Resources Information Center

Kromer, Megan E.

The booklet describes Project ABC (Any Baby Can), a model networking effort to promote coordinated services for disabled and high-risk infants in San Antonio, Texas. The model features a volunteer, grass-roots emphasis in an aggressive community awareness campaign with a long-term goal of improving the effectiveness of social services and health…

Allometric models for predicting aboveground biomass and carbon stock of tropical perennial C4 grasses in Hawaii

USDA-ARS?s Scientific Manuscript database

Biomass represents a promising renewable energy opportunity that mayprovide a more sustainable alternative to the use of fossil resources by minimizing the net production of greenhouse gases. Yet, allometric models that allow the prediction of biomass, biomass carbon (C) and nitrogen (N) stocks rap...

UAV-imaging to model growth response of marram grass to sand burial: Implications for coastal dune development

NASA Astrophysics Data System (ADS)

Nolet, Corjan; van Puijenbroek, Marinka; Suomalainen, Juha; Limpens, Juul; Riksen, Michel

2018-04-01

Vegetated coastal dunes have the capacity to keep up with sea-level rise by accumulating and stabilizing wind-blown sand. In Europe, this is attributed to marram grass (Ammophila arenaria), a coastal grass species that combines two unique advantages for dune-building: (1) a very high tolerance to burial by wind-blown sand, and (2) more vigorous growth due to positive feedback to sand burial. However, while these vegetation characteristics have been demonstrated, observational data has not been used to model a function to describe the growth response of Ammophila to sand burial. Studies that model coastal dune development by incorporating positive feedback, as a result, may be hampered by growth functions that are unvalidated against field data. Therefore, this study aims to parameterize an empirical relationship to model the growth response of Ammophila to burial by wind-blown sand. A coastal foredune along a nourished beach in the Netherlands was monitored from April 2015 to April 2016. High-resolution geospatial data was acquired using an Unmanned Aerial Vehicle (UAV). Growth response of Ammophila, expressed by changes in Normalized Difference Vegetation Index (Δ NDVI) and vegetation cover (Δ Cover), is related to a sand burial gradient by fitting a Gaussian function using nonlinear quantile regression. The regression curves indicate an optimal burial rate for Ammophila of 0.31 m of sand per growing season, and suggest (by extrapolation of the data) a maximum burial tolerance for Ammophila between 0.78 (for Δ Cover) and 0.96 m (for Δ NDVI) of sand per growing season. These findings are advantageous to coastal management: maximizing the potential of Ammophila to develop dunes maximizes the potential of coastal dunes to provide coastal safety.

Effect of cattle grazing, seeded grass, and an herbicide on ponderosa pine seedling survival and growth

Treesearch

Philip M. McDonald; Gary O. Fiddler

1999-01-01

On a site of above-average quality in northern California, an early shrub-forb-grass plant community was treated by artificially seeding two forage grass species at plantation age 3, cattle grazing with and without seeded grasses, and applying a soil-active chemical (Velpar). Planted ponderosa pines were part of this community. Results for a 10-year period (1988-1997)...

Final Environmental Assessment Implementation of the Integrated Natural Resources Management Plan for Avon Park Air Force Range Florida

DTIC Science & Technology

2004-01-01

verticillata Hydrilla Hymenachne amplexicaulis West In mdian arsh grass Imperata cylindrica Cogon grass Lantana camara Lantana Ligustrum sinense Chinese...divine nightshade (Solanum nigrescens) Coast sandspur (Cenchrus incertus) Three plants — tropical soda apple (Solanum viarum), cogon grass ( Imperata ... cylindrica ), and smut grass (Sporobolus indicus) — are highly invasive and adventive and will be actively controlled with herbicide to reduce

77 FR 15798 - Notice of Intent To Repatriate Cultural Items: San Francisco State University, San Francisco, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-16

... height and 10.5 cm in diameter and is made of deer grass, sedge, redbud and bracken fern root. There are... deer grass, saw grass, redbud and bracken fern root. A tag attached to the basket was labeled... height with a maximum diameter of 18 cm and is made of deer grass, sedge, redbud and bracken fern root. A...

Urban Rights-of-Way as Reservoirs for Tall-Grass Prairie Plants and Butterflies.

PubMed

Leston, Lionel; Koper, Nicola

2016-03-01

Urban rights-of-way may be potential reservoirs of tall-grass prairie plants and butterflies. To determine if this is true, in 2007-2008, we conducted vegetation surveys of species richness and cover, and butterfly surveys of species richness and abundance, along 52 transmission lines and four remnant prairies in Winnipeg, Manitoba. We detected many prairie plants and butterflies within transmission lines. Some unmowed and infrequently managed transmission lines had native plant species richness and total percent cover of native plants comparable to that of similar-sized remnant tall-grass prairies in the region. Although we did not find significant differences in overall native butterfly numbers or species richness between rights-of-way and remnant prairies, we found lower numbers of some prairie butterflies along frequently mowed rights-of-way than within remnant tall-grass prairies. We also observed higher butterfly species richness along sites with more native plant species. By reducing mowing and spraying and reintroducing tall-grass prairie plants, urban rights-of-way could serve as extensive reservoirs for tall-grass prairie plants and butterflies in urban landscapes. Eventually, managing urban rights-of-way as reservoirs for tall-grass prairie plants and animals could contribute to the restoration of tall-grass prairie in the North American Midwest.

Urban Rights-of-Way as Reservoirs for Tall-Grass Prairie Plants and Butterflies

NASA Astrophysics Data System (ADS)

Leston, Lionel; Koper, Nicola

2016-03-01

Urban rights-of-way may be potential reservoirs of tall-grass prairie plants and butterflies. To determine if this is true, in 2007-2008, we conducted vegetation surveys of species richness and cover, and butterfly surveys of species richness and abundance, along 52 transmission lines and four remnant prairies in Winnipeg, Manitoba. We detected many prairie plants and butterflies within transmission lines. Some unmowed and infrequently managed transmission lines had native plant species richness and total percent cover of native plants comparable to that of similar-sized remnant tall-grass prairies in the region. Although we did not find significant differences in overall native butterfly numbers or species richness between rights-of-way and remnant prairies, we found lower numbers of some prairie butterflies along frequently mowed rights-of-way than within remnant tall-grass prairies. We also observed higher butterfly species richness along sites with more native plant species. By reducing mowing and spraying and reintroducing tall-grass prairie plants, urban rights-of-way could serve as extensive reservoirs for tall-grass prairie plants and butterflies in urban landscapes. Eventually, managing urban rights-of-way as reservoirs for tall-grass prairie plants and animals could contribute to the restoration of tall-grass prairie in the North American Midwest.

Establishing Grass Range In the Southwest Missouri Ozarks

Treesearch

H.S. Crawford; A.J. Bjugstad

1967-01-01

Prescribed burning to prepare a seed-bed, seedling native grasses or fescue on proper sites, and fertilizing are all necessary for successfully establishing good grass production where trees have been killed by aerially applied berbicides.

Pretreatment of grass waste using combined ionizing radiation-acid treatment for enhancing fermentative hydrogen production.

PubMed

Yang, Guang; Wang, Jianlong

2018-05-01

In this study, the combined ionizing radiation-acid pretreatment process was firstly applied to enhance hydrogen fermentation of grass waste. Results showed that the combined pretreatment synergistically enhanced hydrogen fermentation of grass waste. The SCOD and soluble polysaccharide contents of grass waste increased by 1.6 and 2.91 times after the combined pretreatment, respectively. SEM observation and crystallinity test showed the combined pretreatment effectively disrupted the grass structure. Owing to the more favorable substrate conditions, the hydrogen yield achieved 68 mL/g-dry grass added after the combined pretreatment, which was 161.5%, 112.5% and 28.3% higher than those from raw, ionizing radiation pretreated and acid pretreated grass waste, respectively. The VS removal also increased from 13.9% to 25.6% by the combined pretreatment. Microbial community analysis showed that the abundance of dominant hydrogen producing genus Clostridium sensu stricto 1 increased from 37.9% to 69.4% after the combined pretreatment, which contributed to more efficient hydrogen fermentation. Copyright © 2018 Elsevier Ltd. All rights reserved.

Grassed swales for stormwater pollution control during rain and snowmelt.

PubMed

Bäckström, M

2003-01-01

The retention of suspended solids, particles and heavy metals in different grassed swales during rain events and snowmelt is discussed. The experimental results derived from investigations performed in existing grassed swales in the Luleå region, Northern Sweden. During high pollutant loading rates, grassed swales retain significant amounts of pollutants, mainly due to sedimentation of particulate matter. Low to moderate removal efficiencies could be expected for heavy metals, especially metals in solution (i.e. the dissolved phase). When grassed swales receive urban runoff with low pollutant concentrations, they may release rather than retain pollutants. Swales are important snow deposit areas in the city and particle bound pollutants do to a large extent remain in the swale after snowmelt. However, dissolved pollutants (i.e. dissolved heavy metals) are likely to escape the swale with the melt water. Grassed swales may be regarded as facilities that even out the peaks in pollutant loads without being capable of producing consistent high removal rates. This suggests that swales should be considered as primary treatment devices. Possible design parameters for grassed swales are mean hydraulic detention time, surface loading rate or specific swale area.

Comparison of trees and grasses for rhizoremediation of petroleum hydrocarbons.

PubMed

Cook, Rachel L; Hesterberg, Dean

2013-01-01

Rhizoremediation of petroleum contaminants is a phytoremediation process that depends on interactions among plants, microbes, and soils. Trees and grasses are commonly used for phytoremediation, with trees typically being chosen for remediation of BTEX while grasses are more commonly used for remediation of PAHs and total petroleum hydrocarbons. The objective of this review was to compare the effectiveness of trees and grasses for rhizoremediation of hydrocarbons and address the advantages of each vegetation type. Grasses were more heavily represented in the literature and therefore demonstrated a wider range of effectiveness. However, the greater biomass and depth of tree roots may have greater potential for promoting environmental conditions that can improve rhizoremediation, such as increased metabolizable organic carbon, oxygen, and water. Overall, we found little difference between grasses and trees with respect to average reduction of hydrocarbons for studies that compared planted treatments with a control. Additional detailed investigations into plant attributes that most influence hydrocarbon degradation rates should provide data needed to determine the potential for rhizoremediation with trees or grasses for a given site and identify which plant characteristics are most important.

[Canopy interception of sub-alpine dark coniferous communities in western Sichuan, China].

PubMed

Lü, Yu-liang; Liu, Shi-rong; Sun, Peng-sen; Liu, Xing-liang; Zhang, Rui-pu

2007-11-01

Based on field measurements of throughfall and stemflow in combination with climatic data collected from the meteorological station adjacent to the studied sub-alpine dark coniferous forest in Wolong, Sichuan Province, canopy interception of sub-alpine dark coniferous forests was analyzed and modeled at both stand scale and catchment scale. The results showed that monthly interception rate of Fargesia nitida, Bashania fangiana--Abies faxoniana old-growth ranged from 33% Grass to 72%, with the average of 48%. In growing season, there was a linear or powerful or exponential relationship between rainfall and interception an. a negative exponential relationship between rainfall and interception rate. The mean maximum canopy interception by the vegetation in the catchment of in.44 km was 1.74 ment and the significant differences among the five communities occurred in the following sequence: Moss-Fargesia nitida, Bashan afanglana-A. faxoniana stand > Grass-F. nitida, B. fangiana-A. faxoniana stand > Moss-Rhododendron spp.-A. faxoniana stand > Grass-Rh. spp.-A. faxoniana stand > Rh. spp. shrub. In addition, a close linear relationship existed between leaf area index (LAI) and maximum canopy interception. The simulated value of canopy interception rate, maximum canopy interception rate and addition interception rate of the vegetation in the catchment were 39%, 25% and 14%, respectively. Simulation of the canopy interception model was better at the overall growing season scale, that the mean relative error was 9%-14%.

How good is the turbid medium-based approach for accounting for light partitioning in contrasted grass--legume intercropping systems?

PubMed

Barillot, Romain; Louarn, Gaëtan; Escobar-Gutiérrez, Abraham J; Huynh, Pierre; Combes, Didier

2011-10-01

Most studies dealing with light partitioning in intercropping systems have used statistical models based on the turbid medium approach, thus assuming homogeneous canopies. However, these models could not be directly validated although spatial heterogeneities could arise in such canopies. The aim of the present study was to assess the ability of the turbid medium approach to accurately estimate light partitioning within grass-legume mixed canopies. Three contrasted mixtures of wheat-pea, tall fescue-alfalfa and tall fescue-clover were sown according to various patterns and densities. Three-dimensional plant mock-ups were derived from magnetic digitizations carried out at different stages of development. The benchmarks for light interception efficiency (LIE) estimates were provided by the combination of a light projective model and plant mock-ups, which also provided the inputs of a turbid medium model (SIRASCA), i.e. leaf area index and inclination. SIRASCA was set to gradually account for vertical heterogeneity of the foliage, i.e. the canopy was described as one, two or ten horizontal layers of leaves. Mixtures exhibited various and heterogeneous profiles of foliar distribution, leaf inclination and component species height. Nevertheless, most of the LIE was satisfactorily predicted by SIRASCA. Biased estimations were, however, observed for (1) grass species and (2) tall fescue-alfalfa mixtures grown at high density. Most of the discrepancies were due to vertical heterogeneities and were corrected by increasing the vertical description of canopies although, in practice, this would require time-consuming measurements. The turbid medium analogy could be successfully used in a wide range of canopies. However, a more detailed description of the canopy is required for mixtures exhibiting vertical stratifications and inter-/intra-species foliage overlapping. Architectural models remain a relevant tool for studying light partitioning in intercropping systems that exhibit strong vertical heterogeneities. Moreover, these models offer the possibility to integrate the effects of microclimate variations on plant growth.

Food Web Response to Habitat Restoration in Various Coastal Wetland Ecosystems

NASA Astrophysics Data System (ADS)

James, W. R.; Nelson, J. A.

2017-12-01

Coastal wetland habitats provide important ecosystem services, including supporting coastal food webs. These habitats are being lost rapidly. To combat the effects of these losses, millions of dollars have been invested to restore these habitats. However, the relationship between restoring habitat and restoring ecosystem functioning is poorly understood. Analyzing energy flow through food web comparisons between restored and natural habitats can give insights into ecosystem functioning. Using published stable isotope values from organisms in restored and natural habitats, we assessed the food web response of habitat restoration in salt marsh, mangrove, sea grass, and algal bed ecosystems. We ran Bayesian mixing models to quantify resource use by consumers and generated habitat specific niche hypervolumes for each ecosystem to assess food web differences between restored and natural habitats. Salt marsh, mangrove, and sea grass ecosystems displayed functional differences between restored and natural habitats. Salt marsh and mangrove food webs varied in the amount of each resource used, while the sea grass food web displayed more variation between individual organisms. The algal bed food web showed little variation between restored and natural habitats.

Selection and phenotypic characterization of a core collection of Brachypodium distachyon inbred lines.

PubMed

Tyler, Ludmila; Fangel, Jonatan U; Fagerström, Alexandra Dotson; Steinwand, Michael A; Raab, Theodore K; Willats, William Gt; Vogel, John P

2014-01-14

The model grass Brachypodium distachyon is increasingly used to study various aspects of grass biology. A large and genotypically diverse collection of B. distachyon germplasm has been assembled by the research community. The natural variation in this collection can serve as a powerful experimental tool for many areas of inquiry, including investigating biomass traits. We surveyed the phenotypic diversity in a large collection of inbred lines and then selected a core collection of lines for more detailed analysis with an emphasis on traits relevant to the use of grasses as biofuel and grain crops. Phenotypic characters examined included plant height, growth habit, stem density, flowering time, and seed weight. We also surveyed differences in cell wall composition using near infrared spectroscopy (NIR) and comprehensive microarray polymer profiling (CoMPP). In all cases, we observed extensive natural variation including a two-fold variation in stem density, four-fold variation in ferulic acid bound to hemicellulose, and 1.7-fold variation in seed mass. These characterizations can provide the criteria for selecting diverse lines for future investigations of the genetic basis of the observed phenotypic variation.

Alignment of the Genomes of Brachypodium distachyon and Temperate Cereals and Grasses Using Bacterial Artificial Chromosome Landing With Fluorescence in Situ Hybridization

PubMed Central

Hasterok, Robert; Marasek, Agnieszka; Donnison, Iain S.; Armstead, Ian; Thomas, Ann; King, Ian P.; Wolny, Elzbieta; Idziak, Dominika; Draper, John; Jenkins, Glyn

2006-01-01

As part of an initiative to develop Brachypodium distachyon as a genomic “bridge” species between rice and the temperate cereals and grasses, a BAC library has been constructed for the two diploid (2n = 2x = 10) genotypes, ABR1 and ABR5. The library consists of 9100 clones, with an approximate average insert size of 88 kb, representing 2.22 genome equivalents. To validate the usefulness of this species for comparative genomics and gene discovery in its larger genome relatives, the library was screened by PCR using primers designed on previously mapped rice and Poaceae sequences. Screening indicated a degree of synteny between these species and B. distachyon, which was confirmed by fluorescent in situ hybridization of the marker-selected BACs (BAC landing) to the 10 chromosome arms of the karyotype, with most of the BACs hybridizing as single loci on known chromosomes. Contiguous BACs colocalized on individual chromosomes, thereby confirming the conservation of genome synteny and proving that B. distachyon has utility as a temperate grass model species alternative to rice. PMID:16489232

Alignment of the genomes of Brachypodium distachyon and temperate cereals and grasses using bacterial artificial chromosome landing with fluorescence in situ hybridization.

PubMed

Hasterok, Robert; Marasek, Agnieszka; Donnison, Iain S; Armstead, Ian; Thomas, Ann; King, Ian P; Wolny, Elzbieta; Idziak, Dominika; Draper, John; Jenkins, Glyn

2006-05-01

As part of an initiative to develop Brachypodium distachyon as a genomic "bridge" species between rice and the temperate cereals and grasses, a BAC library has been constructed for the two diploid (2n = 2x = 10) genotypes, ABR1 and ABR5. The library consists of 9100 clones, with an approximate average insert size of 88 kb, representing 2.22 genome equivalents. To validate the usefulness of this species for comparative genomics and gene discovery in its larger genome relatives, the library was screened by PCR using primers designed on previously mapped rice and Poaceae sequences. Screening indicated a degree of synteny between these species and B. distachyon, which was confirmed by fluorescent in situ hybridization of the marker-selected BACs (BAC landing) to the 10 chromosome arms of the karyotype, with most of the BACs hybridizing as single loci on known chromosomes. Contiguous BACs colocalized on individual chromosomes, thereby confirming the conservation of genome synteny and proving that B. distachyon has utility as a temperate grass model species alternative to rice.

Application of ARC/INFO to regional scale hydrogeologic modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wurstner, S.K.; McWethy, G.; Devary, J.L.

1993-05-01

Geographic Information Systems (GIS) can be a useful tool in data preparation for groundwater flow modeling, especially when studying large regional systems. ARC/INFO is being used in conjunction with GRASS to support data preparation for input to the CFEST (Coupled Fluid, Energy, and Solute Transport) groundwater modeling code. Simulations will be performed with CFEST to model three-dimensional, regional, groundwater flow in the West Siberian Basin.

Habitat and landscape effects on abundance of Missouri's grassland birds

USGS Publications Warehouse

Jacobs, R.B.; Thompson, F.R.; Koford, Rolf R.; La Sorte, F.A.; Woodward, H.D.; Fitzgerald, J.A.

2012-01-01

Of 6 million ha of prairie that once covered northern and western Missouri, <36,500 ha remain, with planted, managed, and restored grasslands comprising most contemporary grasslands. Most grasslands are used as pasture or hayfields. Native grasses largely have been replaced by fescue (Festuca spp.) on most private lands (almost 7 million ha). Previously cropped fields set aside under the Conservation Reserve Program (CRP) varied from a mix of cool-season grasses and forbs, or mix of native warm-season grasses and forbs, to simple tall-grass monocultures. We used generalized linear mixed models and distance sampling to assess abundance of 8 species of breeding grassland birds on 6 grassland types commonly associated with farm practices in Missouri and located in landscapes managed for grassland-bird conservation. We selected Bird Conservation Areas (BCAs) for their high percentage of grasslands and grassland-bird species, and for <5% forest cover. We used an information-theoretic approach to assess the relationship between bird abundance and 6 grassland types, 3 measures of vegetative structure, and 2 landscape variables (% grassland and edge density within a 1-km radius). We found support for all 3 levels of model parameters, although there was less support for landscape than vegetation structure effects likely because we studied high-percentage-grassland landscapes (BCAs). Henslow's sparrow (Ammodramus henslowii) counts increased with greater percentage of grassland, vegetation height-density, litter depth, and shrub cover and lower edge density. Henslow's sparrow counts were greatest in hayed native prairie. Dickcissel (Spiza americana) counts increased with greater vegetation height-density and were greatest in planted CRP grasslands. Grasshopper sparrow (A. savannarum) counts increased with lower vegetation height, litter depth, and shrub cover. Based on distance modeling, breeding densities of Henslow's sparrow, dickcissel, and grasshopper sparrow in the 6 grassland types ranged 0.9-2.6, 1.4-3.2, and 0.1-1.5 birds/ha, respectively. We suggest different grassland types and structures (vegetation height, litter depth, shrub cover) are needed to support priority grassland-bird species in Missouri. ?? 2011 The Wildlife Society.

Habitat and landscape effects on abundance of Missouri's grassland birds

USGS Publications Warehouse

Jacobson, Robert B.; Thompson, Frank R.; Koford, Rolf R.; La Sorte, Frank A.; Woodward, Hope D.; Fitzgerald, Jane A.

2012-01-01

Of 6 million ha of prairie that once covered northern and western Missouri, <36,500 ha remain, with planted, managed, and restored grasslands comprising most contemporary grasslands. Most grasslands are used as pasture or hayfields. Native grasses largely have been replaced by fescue (Festuca spp.) on most private lands (almost 7 million ha). Previously cropped fields set aside under the Conservation Reserve Program (CRP) varied from a mix of cool-season grasses and forbs, or mix of native warm-season grasses and forbs, to simple tall-grass monocultures. We used generalized linear mixed models and distance sampling to assess abundance of 8 species of breeding grassland birds on 6 grassland types commonly associated with farm practices in Missouri and located in landscapes managed for grassland-bird conservation. We selected Bird Conservation Areas (BCAs) for their high percentage of grasslands and grassland-bird species, and for <5% forest cover. We used an information-theoretic approach to assess the relationship between bird abundance and 6 grassland types, 3 measures of vegetative structure, and 2 landscape variables (% grassland and edge density within a 1-km radius). We found support for all 3 levels of model parameters, although there was less support for landscape than vegetation structure effects likely because we studied high-percentage-grassland landscapes (BCAs). Henslow's sparrow (Ammodramus henslowii) counts increased with greater percentage of grassland, vegetation height-density, litter depth, and shrub cover and lower edge density. Henslow's sparrow counts were greatest in hayed native prairie. Dickcissel (Spiza americana) counts increased with greater vegetation height-density and were greatest in planted CRP grasslands. Grasshopper sparrow (A. savannarum) counts increased with lower vegetation height, litter depth, and shrub cover. Based on distance modeling, breeding densities of Henslow's sparrow, dickcissel, and grasshopper sparrow in the 6 grassland types ranged 0.9–2.6, 1.4–3.2, and 0.1–1.5 birds/ha, respectively. We suggest different grassland types and structures (vegetation height, litter depth, shrub cover) are needed to support priority grassland-bird species in Missouri.

78 FR 35265 - Notice of Receipt of Requests To Voluntarily Cancel Certain Pesticide Registrations

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-12

... Glufosinate. Concentrate Weed, Grass and Brush Killer. 000432-00955 Finale Ready-To-Use Glufosinate. Weed and Grass Killer. 000432-00956 Finale Concentrate Glufosinate. Weed, Grass and Brush Killer. 000655-00802...

Environmental Assessment for Irrigation System for the Golf Course

DTIC Science & Technology

2007-01-01

woodland species oak, maple, willow, bald cypress, sweet gum and loblolly pine. Vegetation located in the project area is Bermuda grass. 3.2.6...in an area of improved grounds. A sod cutter would be used to remove existing Bermuda grass on the course for placement of pipes and sprinklers...The same Bermuda grass would be replaced over the pipes when installation is complete. The grass would then be watered during the hottest summer

Role of fire in the germination ecology of fountain grass (Pennisetum setaceum), an invasive African bunchgrass in Hawaii

Treesearch

Edith N. Adkins; Susan Cordell; Donald R. Drake

2011-01-01

Field and laboratory studies were carried out to test factors expected to be relevant for the germination of fountain grass: (1) light; (2) emergence of fountain grass seedlings from depths of 0, 2.5, and 5 cm; (3) fire passing over exposed and buried seeds; (4) laboratory heat treatment mimicking exposure to grass fire. Both fire in the field and heat applied in the...

Influence of livestock grazing on C sequestration in semi-arid mixed-grass and short-grass rangelands

Treesearch

J.D. Reeder; G.E. Schuman

2001-01-01

We evaluated the effects of livestock grazing on C content of the plant-soil system (to 60 cm) of two semi-arid grasslands: a mixed-grass prairie (grazed 12 years), and a short-grass steppe (grazed 56 years). Grazing treatments included season-long grazing at heavy and light stocking rates, and non-grazed exclosures. Significantly higher soil C (0-30cm) was measured in...

The effect of trace element addition to mono-digestion of grass silage at high organic loading rates.

PubMed

Wall, David M; Allen, Eoin; Straccialini, Barbara; O'Kiely, Padraig; Murphy, Jerry D

2014-11-01

This study investigated the effect of trace element addition to mono-digestion of grass silage at high organic loading rates. Two continuous reactors were compared. The first mono-digested grass silage whilst the second operated in co-digestion, 80% grass silage with 20% dairy slurry (VS basis). The reactors were run for 65weeks with a further 5weeks taken for trace element supplementation for the mono-digestion of grass silage. The co-digestion reactor reported a higher biomethane efficiency (1.01) than mono-digestion (0.90) at an OLR of 4.0kgVSm(-3)d(-1) prior to addition of trace elements. Addition of cobalt, iron and nickel, led to an increase in the SMY in mono-digestion of grass silage by 12% to 404LCH4kg(-1)VS and attained a biomethane efficiency of 1.01. Copyright © 2014 Elsevier Ltd. All rights reserved.

Phytostabilisation potential of lemon grass (Cymbopogon flexuosus (Nees ex Stend) Wats) on iron ore tailings.

PubMed

Mohanty, M; Dhal, N K; Patra, P; Das, B; Reddy, P S R

2012-01-01

The present pot culture study was carried out for the potential phytostabilisation of iron ore tailings using lemon grass (Cymbopogon flexuosus) a drought tolerant, perennial, aromatic grass. Experiments have been conducted by varying the composition of garden soil (control) with iron ore tailings. The various parameters, viz. growth of plants, number of tillers, biomass and oil content of lemon grass are evaluated. The studies have indicated that growth parameters of lemon grass in 1:1 composition of garden soil and iron ore tailings are significantly more (-5% increase) compared to plants grown in control soil. However, the oil content of lemon grass in both the cases more or less remained same. The results also infer that at higher proportion of tailings the yield of biomass decreases. The studies indicate that lemongrass with its fibrous root system is proved to be an efficient soil binder by preventing soil erosion.

Roles of Urban Tree Canopy and Buildings in Urban Heat Island Effects: Parameterization and Preliminary Results

NASA Technical Reports Server (NTRS)

Loughner, Christopher P.; Allen, Dale J.; Zhang, Da-Lin; Pickering, Kenneth E.; Dickerson, Russell R.; Landry, Laura

2012-01-01

Urban heat island (UHI) effects can strengthen heat waves and air pollution episodes. In this study, the dampening impact of urban trees on the UHI during an extreme heat wave in the Washington, D.C., and Baltimore, Maryland, metropolitan area is examined by incorporating trees, soil, and grass into the coupled Weather Research and Forecasting model and an urban canopy model (WRF-UCM). By parameterizing the effects of these natural surfaces alongside roadways and buildings, the modified WRF-UCM is used to investigate how urban trees, soil, and grass dampen the UHI. The modified model was run with 50% tree cover over urban roads and a 10% decrease in the width of urban streets to make space for soil and grass alongside the roads and buildings. Results show that, averaged over all urban areas, the added vegetation decreases surface air temperature in urban street canyons by 4.1 K and road-surface and building-wall temperatures by 15.4 and 8.9 K, respectively, as a result of tree shading and evapotranspiration. These temperature changes propagate downwind and alter the temperature gradient associated with the Chesapeake Bay breeze and, therefore, alter the strength of the bay breeze. The impact of building height on the UHI shows that decreasing commercial building heights by 8 m and residential building heights by 2.5 m results in up to 0.4-K higher daytime surface and near-surface air temperatures because of less building shading and up to 1.2-K lower nighttime temperatures because of less longwave radiative trapping in urban street canyons.

Scale - dependent effects on the surface energy fluxes modelling in Iberian oak-savanna (dehesa) using the Two-Source Energy Balance (TSEB)

NASA Astrophysics Data System (ADS)

Andreu, Ana; Nieto, Hector; Gómez-Giráldez, Pedro; González-Dugo, Maria P.

2017-04-01

Iberian semi-arid oak-savannas (dehesas) are complex ecosystems where bare soil and different layers of vegetation (grass/scrubs/trees) are distributed following heterogeneous patterns. An assumption of the two source energy balance models is that the effective source/sink for turbulent flux exchange at the surface(canopy/soil) is described by a bulk radiometric surface temperature (TRAD) and resistance. Therefore, the agreement of the TRAD used as an input to these models, with the "bulk" concept (determined by the spatial resolution), will influence the final energy fluxes estimations. The representativeness of the field-ground measurements, the spatial resolution of sensors, the averaging and the up-scaling of TRAD and the ecosystem vegetation parameters, will be crucial for the precision of the results, more than in homogeneous landscapes. The aim of this study is to analyze the scale-effects derived from TSEB application, comparing the observed energy fluxes and the estimated ones obtained from multiple TRAD data sources of different nature: tree/grass/soil ground-based observations, tower footprint, hyperspectral reflectance imagery acquired with an airborne platform, medium (Landsat) and low spatial resolution satellite data (Sentinel 3, MODIS), and how the up-scaling of the vegetation structural characteristics contribute to the discrepancies. The study area selected for this purpose is a dehesa site (Santa Clotilde, Cordoba), which present canopy mosaics (oak, annual grasses and bushes) differing in phenology, physiology and functioning, and bare soil, all of them influencing the turbulent and radiative exchanges.

Wildfire, climate, and invasive grass interactions negatively impact an indicator species by reshaping sagebrush ecosystems.

PubMed

Coates, Peter S; Ricca, Mark A; Prochazka, Brian G; Brooks, Matthew L; Doherty, Kevin E; Kroger, Travis; Blomberg, Erik J; Hagen, Christian A; Casazza, Michael L

2016-10-25

Iconic sagebrush ecosystems of the American West are threatened by larger and more frequent wildfires that can kill sagebrush and facilitate invasion by annual grasses, creating a cycle that alters sagebrush ecosystem recovery post disturbance. Thwarting this accelerated grass-fire cycle is at the forefront of current national conservation efforts, yet its impacts on wildlife populations inhabiting these ecosystems have not been quantified rigorously. Within a Bayesian framework, we modeled 30 y of wildfire and climatic effects on population rates of change of a sagebrush-obligate species, the greater sage-grouse, across the Great Basin of western North America. Importantly, our modeling also accounted for variation in sagebrush recovery time post fire as determined by underlying soil properties that influence ecosystem resilience to disturbance and resistance to invasion. Our results demonstrate that the cumulative loss of sagebrush to direct and indirect effects of wildfire has contributed strongly to declining sage-grouse populations over the past 30 y at large spatial scales. Moreover, long-lasting effects from wildfire nullified pulses of sage-grouse population growth that typically follow years of higher precipitation. If wildfire trends continue unabated, model projections indicate sage-grouse populations will be reduced to 43% of their current numbers over the next three decades. Our results provide a timely example of how altered fire regimes are disrupting recovery of sagebrush ecosystems and leading to substantial declines of a widespread indicator species. Accordingly, we present scenario-based stochastic projections to inform conservation actions that may help offset the adverse effects of wildfire on sage-grouse and other wildlife populations.

Root chemistry and soil fauna, but not soil abiotic conditions explain the effects of plant diversity on root decomposition.

PubMed

Chen, Hongmei; Oram, Natalie J; Barry, Kathryn E; Mommer, Liesje; van Ruijven, Jasper; de Kroon, Hans; Ebeling, Anne; Eisenhauer, Nico; Fischer, Christine; Gleixner, Gerd; Gessler, Arthur; González Macé, Odette; Hacker, Nina; Hildebrandt, Anke; Lange, Markus; Scherer-Lorenzen, Michael; Scheu, Stefan; Oelmann, Yvonne; Wagg, Cameron; Wilcke, Wolfgang; Wirth, Christian; Weigelt, Alexandra

2017-11-01

Plant diversity influences many ecosystem functions including root decomposition. However, due to the presence of multiple pathways via which plant diversity may affect root decomposition, our mechanistic understanding of their relationships is limited. In a grassland biodiversity experiment, we simultaneously assessed the effects of three pathways-root litter quality, soil biota, and soil abiotic conditions-on the relationships between plant diversity (in terms of species richness and the presence/absence of grasses and legumes) and root decomposition using structural equation modeling. Our final structural equation model explained 70% of the variation in root mass loss. However, different measures of plant diversity included in our model operated via different pathways to alter root mass loss. Plant species richness had a negative effect on root mass loss. This was partially due to increased Oribatida abundance, but was weakened by enhanced root potassium (K) concentration in more diverse mixtures. Equally, grass presence negatively affected root mass loss. This effect of grasses was mostly mediated via increased root lignin concentration and supported via increased Oribatida abundance and decreased root K concentration. In contrast, legume presence showed a net positive effect on root mass loss via decreased root lignin concentration and increased root magnesium concentration, both of which led to enhanced root mass loss. Overall, the different measures of plant diversity had contrasting effects on root decomposition. Furthermore, we found that root chemistry and soil biota but not root morphology or soil abiotic conditions mediated these effects of plant diversity on root decomposition.

Nutritional composition and in vitro digestibility of grass and legume winter (cover) crops.

PubMed

Brown, A N; Ferreira, G; Teets, C L; Thomason, W E; Teutsch, C D

2018-03-01

In dairy farming systems, growing winter crops for forage is frequently limited to annual grasses grown in monoculture. The objectives of this study were to determine how cropping grasses alone or in mixtures with legumes affects the yield, nutritional composition, and in vitro digestibility of fresh and ensiled winter crops and the yield, nutritional composition, and in vitro digestibility of the subsequent summer crops. Experimental plots were planted with 15 different winter crops at 3 locations in Virginia. At each site, 4 plots of each treatment were planted in a randomized complete block design. The 15 treatments included 5 winter annual grasses [barley (BA), ryegrass (RG), rye (RY), triticale (TR), and wheat (WT)] in monoculture [i.e., no legumes (NO)] or with 1 of 2 winter annual legumes [crimson clover (CC) and hairy vetch (HV)]. After harvesting the winter crops, corn and forage sorghum were planted within the same plots perpendicular to the winter crop plantings. The nutritional composition and the in vitro digestibility of winter and summer crops were determined for fresh and ensiled samples. Growing grasses in mixtures with CC increased forage dry matter (DM) yield (2.84 Mg/ha), but the yield of mixtures with HV (2.47 Mg/ha) was similar to that of grasses grown in monoculture (2.40 Mg/ha). Growing grasses in mixtures with legumes increased the crude protein concentration of the fresh forage from 13.0% to 15.5% for CC and to 17.3% for HV. For neutral detergent fiber (NDF) concentrations, the interaction between grasses and legumes was significant for both fresh and ensiled forages. Growing BA, RY, and TR in mixtures with legumes decreased NDF concentrations, whereas growing RG and WT with legumes did not affect the NDF concentrations of either the fresh or the ensiled forages. Growing grasses in mixtures with legumes decreased the concentration of sugars of fresh forages relative to grasses grown in monoculture. Primarily, this decrease can be attributed to low concentrations of sugars of mixtures with HV (10.5%). Growing grasses in mixtures with legumes reduced the fiber digestibility of both winter crops (75.7% to 72.8% NDF). Growing grasses in mixtures with legumes did not affect estimated DM yield, nutritional composition, or digestibility of the succeeding summer crops. In conclusion, growing grasses in mixtures with legumes as winter forage crops can increase forage estimated DM yields and its nutritional quality in dairy farming sytems. Copyright © 2018 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Distribution, Diversity, and Long-Term Retention of Grass Short Interspersed Nuclear Elements (SINEs).

PubMed

Mao, Hongliang; Wang, Hao

2017-08-01

Instances of highly conserved plant short interspersed nuclear element (SINE) families and their enrichment near genes have been well documented, but little is known about the general patterns of such conservation and enrichment and underlying mechanisms. Here, we perform a comprehensive investigation of the structure, distribution, and evolution of SINEs in the grass family by analyzing 14 grass and 5 other flowering plant genomes using comparative genomics methods. We identify 61 SINE families composed of 29,572 copies, in which 46 families are first described. We find that comparing with other grass TEs, grass SINEs show much higher level of conservation in terms of genomic retention: The origin of at least 26% families can be traced to early grass diversification and these families are among most abundant SINE families in 86% species. We find that these families show much higher level of enrichment near protein coding genes than families of relatively recent origin (51%:28%), and that 40% of all grass SINEs are near gene and the percentage is higher than other types of grass TEs. The pattern of enrichment suggests that differential removal of SINE copies in gene-poor regions plays an important role in shaping the genomic distribution of these elements. We also identify a sequence motif located at 3' SINE end which is shared in 17 families. In short, this study provides insights into structure and evolution of SINEs in the grass family. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Ecophysiological aspects of the interactions between Bromus kopetdaghensis and two nurse shrubs, Astragalus meschedensis and Acantholimon raddeanam in a semiarid rangeland.

PubMed

Jankju, M; Maghamnia, A

2010-07-01

Plant-plant interactions are known as the main biotic drivers of the vegetation dynamics. Therefore, understanding such processes is beneficial for the applied vegetation management. The aim of this research was to investigate the type and intensity of plant-plant interaction during the time course of a growth season. We studied ecophysiological aspects of facilitation and competition between two aridland shrubs, A. meschedensis Bunge and A. raddeanam Czernjak and one perennial grass, B. kopetdaghensis Krasch. Soil and plant sampling were carried out for shrubs and the grass that were either growing alone or the grass was growing under the canopy of shrubs. In Spring (May), soil humidity weight was higher under the shrubs+grass than the grass-only site. By the beginning of Summer (July) grass consumed the common soil water and rapidly terminated its yearly growth. Therefore, in August and September, soil humidity weight was lower under the shrubs+grass than shrub-only sites. Photosynthesis rate of B. kopetdaghensis was sharply reduced from the beginning towards the end of growth season, but was not varied between the different plant combinations. Leaf proline measurement in July indicated higher stress for B. kopetdaghensis that were growing under shrubs than those of open areas. In conclusion, we found facilitation effects of shrubs on the grass at the early times of growth season, but it shifted into the competition for water during summer times. The outcome of plant interaction was positive for the grass but negative for the shrubs, especially A. meschedensis.

A systematic review of wild grass exploitation in relation to emerging cereal cultivation throughout the Epipalaeolithic and aceramic Neolithic of the Fertile Crescent.

PubMed

Weide, Alexander; Riehl, Simone; Zeidi, Mohsen; Conard, Nicholas J

2018-01-01

The present study investigates the occurrence of wild grasses at Epipalaeolithic and aceramic Neolithic sites in the Near East in order to assess their role in subsistence economies alongside the emergence of cereal cultivation. We use Chogha Golan in the foothills of the central Zagros Mountains (ca. 11.7-9.6 ka cal. BP) as a case study, where the archaeobotanical data suggest the frequent exploitation of a complex of wild grasses for almost 2,000 years. Domesticated emmer replaced these wild grasses as the major food resources towards the end of occupation at the site (ca. 9.8 ka cal. BP). We discuss possible implications of this development and conclude that the traditional concept of pre-domestication cultivation seems unsuited for explaining the patterns from Chogha Golan. These data are in good accordance with the overall picture in the Zagros Mountains, where wild grasses were routinely gathered throughout the early Holocene. In contrast, wild grasses were gradually replaced by wild cereals in the Levantine corridor since the end of the Pleistocene. However, several sites located in this region provide evidence for a continuous exploitation of wild grasses alongside emerging cereal cultivation and most of these taxa were part of the earliest segetal floras that evolved with the appearance of domestic cereals throughout the 11th millennium cal. BP. Some sites contemporary to the Pre-Pottery Neolithic B still provide evidence for the usage of wild grasses, which possibly reflects the utilization of edible arable weeds and continuous gathering of wild grasses by more mobile groups.

Molecular Evolution of Hypoallergenic Hybrid Proteins for Vaccination against Grass Pollen Allergy

PubMed Central

Linhart, Birgit; Focke-Tejkl, Margarete; Weber, Milena; Narayanan, Meena; Neubauer, Angela; Mayrhofer, Hannes; Blatt, Katharina; Lupinek, Christian; Valent, Peter

2015-01-01

More than 10% of the population in Europe and North America suffer from IgE-associated allergy to grass pollen. In this article, we describe the development of a vaccine for grass pollen allergen-specific immunotherapy based on two recombinant hypoallergenic mosaic molecules, designated P and Q, which were constructed out of elements derived from the four major timothy grass pollen allergens: Phl p 1, Phl p 2, Phl p 5, and Phl p 6. Seventeen recombinant mosaic molecules were expressed and purified in Escherichia coli using synthetic genes, characterized regarding biochemical properties, structural fold, and IgE reactivity. We found that depending on the arrangement of allergen fragments, mosaic molecules with strongly varying IgE reactivity were obtained. Based on an extensive screening with sera and basophils from allergic patients, two hypoallergenic mosaic molecules, P and Q, incorporating the primary sequence elements of the four grass pollen allergens were identified. As shown by lymphoproliferation experiments, they contained allergen-specific T cell epitopes required for tolerance induction, and upon immunization of animals induced higher allergen-specific IgG Abs than the wild-type allergens and a registered monophosphoryl lipid A–adjuvanted vaccine based on natural grass pollen allergen extract. Moreover, IgG Abs induced by immunization with P and Q inhibited the binding of patients’ IgE to natural allergens from five grasses better than IgG induced with the wild-type allergens or an extract-based vaccine. Our results suggest that vaccines based on the hypoallergenic grass pollen mosaics can be used for immunotherapy of grass pollen allergy. PMID:25786690

Preventive and Therapeutic Role of Functional Ingredients of Barley Grass for Chronic Diseases in Human Beings

PubMed Central

Du, Juan; Yang, Xiaomeng; Li, Xia; Li, Ling; Zhou, Yan; Yang, Tao

2018-01-01

Barley grass powder is the best functional food that provides nutrition and eliminates toxins from cells in human beings; however, its functional ingredients have played an important role as health benefit. In order to better cognize the preventive and therapeutic role of barley grass for chronic diseases, we carried out the systematic strategies for functional ingredients of barley grass, based on the comprehensive databases, especially the PubMed, Baidu, ISI Web of Science, and CNKI, between 2008 and 2017. Barley grass is rich in functional ingredients, such as gamma-aminobutyric acid (GABA), flavonoids, saponarin, lutonarin, superoxide dismutase (SOD), K, Ca, Se, tryptophan, chlorophyll, vitamins (A, B1, C, and E), dietary fiber, polysaccharide, alkaloid, metallothioneins, and polyphenols. Barley grass promotes sleep; has antidiabetic effect; regulates blood pressure; enhances immunity; protects liver; has anti-acne/detoxifying and antidepressant effects; improves gastrointestinal function; has anticancer, anti-inflammatory, antioxidant, hypolipidemic, and antigout effects; reduces hyperuricemia; prevents hypoxia, cardiovascular diseases, fatigue, and constipation; alleviates atopic dermatitis; is a calcium supplement; improves cognition; and so on. These results support that barley grass may be one of the best functional foods for preventive chronic diseases and the best raw material of modern diet structure in promoting the development of large health industry and further reveal that GABA, flavonoids, SOD, K-Ca, vitamins, and tryptophan mechanism of barley grass have preventive and therapeutic role for chronic diseases. This paper can be used as a scientific evidence for developing functional foods and novel drugs for barley grass for preventive chronic diseases.

Grassland-shrubland state transitions in arid rangelands: Competition matters

USDA-ARS?s Scientific Manuscript database

Background: State transition from grassland to shrubland is synonymous with desertification in many arid rangeland systems. Traditional desertification models emphasize abiotic feedbacks that modify the physical environment in ways that promote shrub proliferation and impede grass survival. Inherent...

Grass Roots Participation: Planting the Seeds of Good Citizenship.

ERIC Educational Resources Information Center

Chiodo, John J.; Knapke, Jerry

1981-01-01

Suggests the study of local issues as an active approach to citizenship education in the elementary and secondary grades. Presents a model activity for high school civics students on investigating the impact of a new shopping mall. (SJL)

Red Thread Found on Bermuda Grass

Treesearch

T. H. Filer

1966-01-01

Red thread fungus (Corticium fuciforme (Berk.) Wakef.) was observed in 1965 and 1966 on Bermuda grass (Cynodon dactylon) on lawns in Leland, Mississippi. Red thread is a serious disease on fescues but has not previously been reported on Bermuda grass.

Herbivores sculpt leaf traits differently in grasslands depending on life form and land-use histories.

PubMed

Firn, Jennifer; Schütz, Martin; Nguyen, Huong; Risch, Anita C

2017-01-01

Vertebrate and invertebrate herbivores alter plant communities directly by selectively consuming plant species; and indirectly by inducing morphological and physiological changes to plant traits that provide competitive or survivorship advantages to some life forms over others. Progressively excluding aboveground herbivore communities (ungulates, medium and small sized mammals, invertebrates) over five growing seasons, we explored how leaf morphology (specific leaf area or SLA) and nutrition (nitrogen, carbon, phosphorous, potassium, sodium, and calcium) of different plant life forms (forbs, legumes, grasses, sedges) correlated with their dominance. We experimented in two subalpine grassland types with different land-use histories: (1) heavily grazed, nutrient-rich, short-grass vegetation and (2) lightly grazed, lower nutrient tall-grass vegetation. We found differences in leaf traits between treatments where either all herbivores were excluded or all herbivores were present, showing the importance of considering the impacts of both vertebrates and invertebrates on the leaf traits of plant species. Life forms responses to the progressive exclusion of herbivores were captured by six possible combinations: (1) increased leaf size and resource use efficiency (leaf area/nutrients) where lower nutrient levels are invested in leaf construction, but a reduction in the number of leaves, for example, forbs in both vegetation types, (2) increased leaf size and resource use efficiency, for example, legumes in short grass, (3) increased leaf size but a reduction in the number of leaves, for example, legumes in the tall grass, (4) increased number of leaves produced and increased resource use efficiency, for example, grasses in the short grass, (5) increased resource use efficiency of leaves only, for example, grasses and sedges in the tall grass, and (6) no response in terms of leaf construction or dominance, for example, sedges in the short grass. Although we found multiple possible responses by life forms to progressive exclusion of herbivores, we also found some important generalities. Changes in leaf traits of legumes and grasses correlated with their increasing dominance in the short-grass vegetation and plants were more efficient at constructing photosynthetic tissue when herbivores are present with few exceptions. These results demonstrate that vertebrate and invertebrate herbivores are essential to maintain plant species richness and resource-use efficiency. © 2016 by the Ecological Society of America.

Natural lactic acid bacteria population of tropical grasses and their fermentation factor analysis of silage prepared with cellulase and inoculant.

PubMed

Khota, Waroon; Pholsen, Suradej; Higgs, David; Cai, Yimin

2016-12-01

Natural lactic acid bacteria (LAB) populations in tropical grasses and their fermentation characteristics on silage prepared with cellulase enzyme and LAB inoculants were studied. A commercial inoculant Lactobacillus plantarum Chikuso 1 (CH), a local selected strain Lactobacillus casei TH14 (TH14), and 2 cellulases, Acremonium cellulase (AC) and Maicelase (MC; Meiji Seika Pharma Co. Ltd., Tokyo, Japan), were used as additives to silage preparation with fresh and wilted (6 h) Guinea grass and Napier grass. Silage was prepared using a laboratory-scale fermentation system. Treatments were CH, TH14, AC at 0.01% fresh matter, AC 0.1%, MC 0.01%, MC 0.1%, CH+AC 0.01%, CH+AC 0.1%, CH+MC 0.01%, CH+MC 0.1%, TH14+AC 0.1%, TH14+AC 0.01%, TH14+MC 0.1%, and TH14+MC 0.01%. Microorganism counts of Guinea grass and Napier grass before ensiling were 10 2 LAB and 10 6 aerobic bacteria; these increased during wilting. Based on morphological and biochemical characteristics, and 16S rRNA gene sequence analysis, natural strains from both grasses were identified as L. plantarum, L. casei, Lactobacillus acidipiscis, Leuconostoc pseudomesenteroides, Leuconostoc garlicum, Weissella confusa, and Lactococcus lactis. Lactobacillus plantarum and L. casei are the dominant species and could grow at lower pH and produce more lactic acid than the other isolates. Crude protein and neutral detergent fiber were 5.8 and 83.7% of dry matter (DM) for Guinea grass, and 7.5 and 77.1% of DM for Napier grass. Guinea grass had a low level of water-soluble carbohydrates (0.39% of DM). Guinea grass silage treated with cellulase had a lower pH and higher lactic acid content than control and LAB treatments. The 0.1% AC and MC treatments had the best result for fermentation quality. All high water-soluble carbohydrate (2.38% DM) Napier grass silages showed good fermentation quality. Compared with control and LAB-inoculated silage, the cellulase-treated silages had significantly higher crude protein content and lower neutral detergent fiber and acid detergent fiber contents. The results confirmed that cellulase could improve tropical silage quality, inhibiting protein degradation and promoting fiber degradation. Copyright © 2016 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Globes from global data: Charting international research networks with the GRASS GIS r.out.polycones add-on module.

NASA Astrophysics Data System (ADS)

Löwe, Peter

2015-04-01

Many Free and Open Source Software (FOSS) tools have been created for the various application fields within geoscience. While FOSS allows re-implementation of functionalities in new environments by access to the original codebase, the easiest approach to build new software solutions for new problems is the combination or merging of existing software tools. Such mash-ups are implemented by embedding and encapsulating FOSS tools within each another, effectively focusing the use of the embedded software to the specific role it needs to perform in the given scenario, while ignoring all its other capabilities. GRASS GIS is a powerful and established FOSS GIS for raster, vector and volume data processing while the Generic Mapping Tools (GMT) are a suite of powerful Open Source mapping tools, which exceed the mapping capabilities of GRASS GIS. This poster reports on the new GRASS GIS add-on module r.out.polycones. It enables users to utilize non-continuous projections for map production within the GRASS production environment. This is implemented on the software level by encapsulating a subset of GMT mapping capabilities into a GRASS GIS (Version 6.x) add-on module. The module was developed at the German National Library of Science and Technology (TIB) to provide custom global maps of scientific collaboration networks, such as the DataCite consortium, the registration agency for Digital Object Identifiers (DOI) for research data. The GRASS GIS add-on module can be used for global mapping of raster data into a variety of non continuous sinosoidal projections, allowing the creation of printable biangles (gores) to be used for globe making. Due to the well structured modular nature of GRASS modules, technical follow-up work will focus on API-level Python-based integration in GRASS 7 [1]. Based on this, GMT based mapping capabilities in GRASS will be extended beyond non-continuous sinosoidal maps and advanced from raster-layers to content GRASS display monitors. References: [1] Petras, V., Petrasova, A., Chemin, Y., Zambelli, P., Landa, M., Gebbert, S., Neteler, N., Löwe, P.: Analyzing rasters, vectors and time series using new Python interfaces in GRASS GIS 7, Geophysical Research Abstracts Vol. 17, EGU2015-8142, 2015 (in preparation)

Phytomining Perspectives in Rehabilitation of Mining and Industrial Areas of South Ural

NASA Astrophysics Data System (ADS)

Timofeeva, S. S.; Ulrikh, D. V.; Timofeev, S. S.

2017-05-01

The ability of midland hawthorn (Crataegus laevigata (Poir)), common barberry (Berberis vulgaris), red elder (Sambucus racemosa), cinnamon rose (Rosa cinnamomea L.), couch grass (Elytrigia repens), crested wheat grass (Agropyron cristatum), meadow fescue (Festuca pratensis) and meadow grass (Poa pratensis) for phytoextraction of heavy metals from technogenic soil is proved in the article. The possibility of effective phytoextraction with the use of hawthorn and elder is shown. Maximum accumulation of zinc takes place in the surface mass of couch grass and meadow fescue. In regard to the conditions of South Ural, planting of elder and hawthorn with seeding of couch grass and meadow fescue is recommended for phytomining purposes.

Spreaders, igniters, and burning shrubs: plant flammability explains novel fire dynamics in grass-invaded deserts.

PubMed

Fuentes-Ramirez, Andres; Veldman, Joseph W; Holzapfel, Claus; Moloney, Kirk A

2016-10-01

Novel fire regimes are an important cause and consequence of global environmental change that involve interactions among biotic, climatic, and human components of ecosystems. Plant flammability is key to these interactions, yet few studies directly measure flammability or consider how multiple species with different flammabilities interact to produce novel fire regimes. Deserts of the southwestern United States are an ideal system for exploring how novel fire regimes can emerge when fire-promoting species invade ecosystems comprised of species that did not evolve with fire. In these deserts, exotic annual grasses provide fuel continuity across landscapes that did not historically burn. These fires often ignite a keystone desert shrub, the fire-intolerant creosote bush, Larrea tridentata (DC.) Coville. Ignition of Larrea is likely catalyzed by fuels produced by native plants that grow beneath the shrubs. We hypothesize that invasive and native species exhibit distinct flammability characteristics that in combination determine spatial patterns of fire spread and intensity. We measured flammability metrics of Larrea, two invasive grasses, Schismus arabicus and Bromus madritensis, and two native plants, the sub-shrub Ambrosia dumosa and the annual herb Amsinckia menziesii. Results of laboratory experiments show that the grasses carry fire quickly (1.32 cm/s), but burn for short duration (0.5 min) at low temperatures. In contrast, native plants spread fire slowly (0.12 cm/s), but burn up to eight times longer (4 min) and produced hotter fires. Additional experiments on the ignition requirements of Larrea suggest that native plants burn with sufficient temperature and duration to ignite dead Larrea branches (time to ignition, 2 min; temperature at ignition 692°C). Once burning, these dead branches ignite living branches in the upper portions of the shrub. Our study provides support for a conceptual model in which exotic grasses are "spreaders" of fire and native plants growing beneath shrubs are "igniters" of dead Larrea branches. Once burning, flames produced by dead branches engulf the entire shrub, resulting in locally intense fires without historical precedent in this system. We suggest that fire models and conservation-focused management could be improved by incorporating the distinct flammability characteristics and spatial distributions of spreaders, igniters, and keystone shrubs. © 2016 by the Ecological Society of America.

Benthic Ecology from Space: Optics and Net Primary Production in Seagrass and Benthic Algae Across the Great Bahama Bank

DTIC Science & Technology

2010-01-01

prevailing benthic habitat was mapped as sediment with little to no microalgal biofilm. Moderate to dense sea- grass meadows of Thalassia testudinum were...dense seagrass meadows of Thalassia testudinum were the dominant primary producers and contributed over 80% of NPP in the region. If the vast majority of...density of the seagrasses Thalassia testudinum (turtle grass), Syringodium filiforme (manatee grass), and Halodule wrightii (shoal grass) were estimated

Testing the Amazon savannization hypothesis: fire effects on invasion of a neotropical forest by native cerrado and exotic pasture grasses

PubMed Central

Silvério, Divino V.; Brando, Paulo M.; Balch, Jennifer K.; Putz, Francis E.; Nepstad, Daniel C.; Oliveira-Santos, Claudinei; Bustamante, Mercedes M. C.

2013-01-01

Changes in climate and land use that interact synergistically to increase fire frequencies and intensities in tropical regions are predicted to drive forests to new grass-dominated stable states. To reveal the mechanisms for such a transition, we established 50 ha plots in a transitional forest in the southwestern Brazilian Amazon to different fire treatments (unburned, burned annually (B1yr) or at 3-year intervals (B3yr)). Over an 8-year period since the commencement of these treatments, we documented: (i) the annual rate of pasture and native grass invasion in response to increasing fire frequency; (ii) the establishment of Brachiaria decumbens (an African C4 grass) as a function of decreasing canopy cover and (iii) the effects of grass fine fuel on fire intensity. Grasses invaded approximately 200 m from the edge into the interiors of burned plots (B1yr: 4.31 ha; B3yr: 4.96 ha) but invaded less than 10 m into the unburned plot (0.33 ha). The probability of B. decumbens establishment increased with seed availability and decreased with leaf area index. Fine fuel loads along the forest edge were more than three times higher in grass-dominated areas, which resulted in especially intense fires. Our results indicate that synergies between fires and invasive C4 grasses jeopardize the future of tropical forests. PMID:23610179

The effect of seaweed Ecklonia maxima extract and mineral nitrogen on fodder grass chemical composition.

PubMed

Ciepiela, Grażyna Anna; Godlewska, Agnieszka; Jankowska, Jolanta

2016-02-01

The objective of this study was to determine the effect of the biostimulant Kelpak and different nitrogen rates on cellulose, hemicellulose and lignin contents as well as non-structural carbohydrates in orchard grass and Braun's festulolium. The experiment was a split-plot arrangement with three replicates. It was set up at the experimental facility of the University of Natural Sciences and Humanities, Siedlce, in late April 2009. The following factors were examined: biostimulant with the trade name Kelpak SL applied at 2 dm(3) ha(-1) and a control-no biostimulant; nitrogen application rates 50 and 150 kg ha(-1) and a control (0 kg ha(-1)); pure stands of grass species grown in monoculture--orchard grass (Dactylis glomerata), cv. Amila,-Braun's festulolium (Festulolium braunii), cv. Felopa. Kelpak significantly increased non-structural carbohydrates, and increasing nitrogen rates reduced the concentration of these components in plants. Increasing nitrogen rates significantly decreased cellulose, hemicellulose, lignin and non-structural carbohydrate contents. Compared with orchard grass, Braun's festulolium proved to be of a higher nutritional value due to lower cellulose, hemicellulose and lignin contents and more non-structural carbohydrates. The aforementioned contents in the grasses differed significantly depending on the cut. Most cellulose and non-structural carbohydrates were determined in second-cut grass whereas most hemicellulose and lignin in second-cut grass.

A case study of the carbon footprint of milk from high-performing confinement and grass-based dairy farms.

PubMed

O'Brien, D; Capper, J L; Garnsworthy, P C; Grainger, C; Shalloo, L

2014-03-01

Life-cycle assessment (LCA) is the preferred methodology to assess carbon footprint per unit of milk. The objective of this case study was to apply an LCA method to compare carbon footprints of high-performance confinement and grass-based dairy farms. Physical performance data from research herds were used to quantify carbon footprints of a high-performance Irish grass-based dairy system and a top-performing United Kingdom (UK) confinement dairy system. For the US confinement dairy system, data from the top 5% of herds of a national database were used. Life-cycle assessment was applied using the same dairy farm greenhouse gas (GHG) model for all dairy systems. The model estimated all on- and off-farm GHG sources associated with dairy production until milk is sold from the farm in kilograms of carbon dioxide equivalents (CO2-eq) and allocated emissions between milk and meat. The carbon footprint of milk was calculated by expressing GHG emissions attributed to milk per tonne of energy-corrected milk (ECM). The comparison showed that when GHG emissions were only attributed to milk, the carbon footprint of milk from the Irish grass-based system (837 kg of CO2-eq/t of ECM) was 5% lower than the UK confinement system (884 kg of CO2-eq/t of ECM) and 7% lower than the US confinement system (898 kg of CO2-eq/t of ECM). However, without grassland carbon sequestration, the grass-based and confinement dairy systems had similar carbon footprints per tonne of ECM. Emission algorithms and allocation of GHG emissions between milk and meat also affected the relative difference and order of dairy system carbon footprints. For instance, depending on the method chosen to allocate emissions between milk and meat, the relative difference between the carbon footprints of grass-based and confinement dairy systems varied by 3 to 22%. This indicates that further harmonization of several aspects of the LCA methodology is required to compare carbon footprints of contrasting dairy systems. In comparison to recent reports that assess the carbon footprint of milk from average Irish, UK, and US dairy systems, this case study indicates that top-performing herds of the respective nations have carbon footprints 27 to 32% lower than average dairy systems. Although differences between studies are partly explained by methodological inconsistency, the comparison suggests that potential exists to reduce the carbon footprint of milk in each of the nations by implementing practices that improve productivity. Copyright © 2014 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Negative impacts of invasive plants on conservation of sensitive desert wildlife

USGS Publications Warehouse

Drake, K. Kristina; Bowen, Lizabeth; Nussear, Kenneth E.; Esque, Todd C.; Berger, Andrew J.; Custer, Nathan; Waters, Shannon C.; Johnson, Jay D.; Miles, A. Keith; Lewison, Rebecca L.

2016-01-01

Habitat disturbance from development, resource extraction, off-road vehicle use, and energy development ranks highly among threats to desert systems worldwide. In the Mojave Desert, United States, these disturbances have promoted the establishment of nonnative plants, so that native grasses and forbs are now intermixed with, or have been replaced by invasive, nonnative Mediterranean grasses. This shift in plant composition has altered food availability for Mojave Desert tortoises (Gopherus agassizii), a federally listed species. We hypothesized that this change in forage would negatively influence the physiological ecology, immune competence, and health of neonatal and yearling tortoises. To test this, we monitored the effects of diet on growth, body condition, immunological responses (measured by gene transcription), and survival for 100 captive Mojave tortoises. Tortoises were assigned to one of five diets: native forbs, native grass, invasive grass, and native forbs combined with either the native or invasive grass. Tortoises eating native forbs had better body condition and immune functions, grew more, and had higher survival rates (>95%) than tortoises consuming any other diet. At the end of the experiment, 32% of individuals fed only native grass and 37% fed only invasive grass were found dead or removed from the experiment due to poor body conditions. In contrast, all tortoises fed either the native forb or combined native forb and native grass diets survived and were in good condition. Health and body condition quickly declined for tortoises fed only the native grass (Festuca octoflora) or invasive grass (Bromus rubens) with notable loss of fat and muscle mass and increased muscular atrophy. Bromus rubens seeds were found embedded in the oral mucosa and tongue in most individuals eating that diet, which led to mucosal inflammation. Genes indicative of physiological, immune, and metabolic functions were transcribed at lower levels for individuals fed B. rubens, indicating potential greater susceptibility to disease or other health-related problems. This study highlights the negative indirect effects of invasive grasses, such as red brome, in desert ecosystems, and provides definitive evidence of a larger negative consequence to health, survival, and ultimately population recruitment for Mojave Desert tortoises than previously understood.

Sequence organization and evolutionary dynamics of Brachypodium-specific centromere retrotransposons.

PubMed

Qi, L L; Wu, J J; Friebe, B; Qian, C; Gu, Y Q; Fu, D L; Gill, B S

2013-08-01

Brachypodium distachyon is a wild annual grass belonging to the Pooideae, more closely related to wheat, barley, and forage grasses than rice and maize. As an experimental model, the completed genome sequence of B. distachyon provides a unique opportunity to study centromere evolution during the speciation of grasses. Centromeric satellite sequences have been identified in B. distachyon, but little is known about centromeric retrotransposons in this species. In the present study, bacterial artificial chromosome (BAC)-fluorescence in situ hybridization was conducted in maize, rice, barley, wheat, and rye using B. distachyon (Bd) centromere-specific BAC clones. Eight Bd centromeric BAC clones gave no detectable fluorescence in situ hybridization (FISH) signals on the chromosomes of rice and maize, and three of them also did not yield any FISH signals in barley, wheat, and rye. In addition, four of five Triticeae centromeric BAC clones did not hybridize to the B. distachyon centromeres, implying certain unique features of Brachypodium centromeres. Analysis of Brachypodium centromeric BAC sequences identified a long terminal repeat (LTR)-centromere retrotransposon of B. distachyon (CRBd1). This element was found in high copy number accounting for 1.6 % of the B. distachyon genome, and is enriched in Brachypodium centromeric regions. CRBd1 accumulated in active centromeres, but was lost from inactive ones. The LTR of CRBd1 appears to be specific to B. distachyon centromeres. These results reveal different evolutionary events of this retrotransposon family across grass species.

Linking dominant Hawaiian tree species to understory development in recovering pastures via impacts on soils and litter

USGS Publications Warehouse

Yelenik, Stephanie G.

2017-01-01

Large areas of tropical forest have been cleared and planted with exotic grass species for use as cattle pasture. These often remain persistent grasslands after grazer removal, which is problematic for restoring native forest communities. It is often hoped that remnant and/or planted trees can jump-start forest succession; however, there is little mechanistic information on how different canopy species affect community trajectories. To investigate this, I surveyed understory communities, exotic grass biomass, standing litter pools, and soil properties under two dominant canopy trees—Metrosideros polymorpha (‘ōhi‘a) and Acacia koa (koa)—in recovering Hawaiian forests. I then used structural equation models (SEMs) to elucidate direct and indirect effects of trees on native understory. Native understory communities developed under ‘ōhi‘a, which had larger standing litter pools, lower soil nitrogen, and lower exotic grass biomass than koa. This pattern was variable, potentially due to historical site differences and/or distance to intact forest. Koa, in contrast, showed little understory development. Instead, data suggest that increased soil nitrogen under koa leads to high grass biomass that stalls native recruitment. SEMs suggested that indirect effects of trees via litter and soils were as or more important than direct effects for determining native cover. It is suggested that diverse plantings which incorporate species that have high carbon to nitrogen ratios may help ameliorate the negative indirect effects of koa on natural understory regeneration.

Various cross-reactivity of the grass pollen group 4 allergens: crystallographic study of the Bermuda grass isoallergen Cyn d 4.

PubMed

Huang, Tse-Hao; Peng, Ho-Jen; Su, Song-Nan; Liaw, Shwu-Huey

2012-10-01

The structure of Cyn d 4, the group 4 allergen from Bermuda grass, is reported at 2.15 Å resolution and is the first crystal structure of a naturally isolated pollen allergen. A conserved N-terminal segment that is only present in the large isoallergens forms extensive interactions with surrounding residues and hence greatly enhances the structural stability of the protein. Cyn d 4 contains an FAD cofactor that is covalently linked to His88 and Cys152. To date, all identified bicovalent flavoproteins are oxidases and their substrates are either sugars or secondary metabolites. A deep large hydrophobic substrate-binding cleft is present. Thus, Cyn d 4 may be an oxidase that is involved in the biosynthesis of a pollen-specific metabolite. Cyn d 4 shares ~70% sequence identity with the Pooideae group 4 allergens. Various cross-reactivities between grass pollen group 4 allergens have previously been demonstrated using sera from allergic patients. The protein surface displays an unusually large number of positively charged clusters, reflecting the high pI of ~10. 38 decapeptides that cover the solvent-accessible sequences did not show any significant IgE-binding activity using sera with high Cyn d 4 reactivity from four patients, suggesting that the IgE epitopes of Cyn d 4 are predominantly conformational in nature. Several group 4 structures were then modelled and their potential cross-reactive and species-specific IgE epitopes were proposed.

Pests in ornamental grasses

USDA-ARS?s Scientific Manuscript database

Ornamental perennial grasses are becoming increasingly popular in the landscape due to their beauty and ease of care. Although few pest problems are encountered in ornamental grasses, they are not immune to insects and disease. Two lined spittlebugs (Prosapia bicincta) can cause damage to ornament...

Reseeding big sagebrush: Techniques and issues

Treesearch

Nancy L. Shaw; Ann M. DeBolt; Roger Rosentreter

2005-01-01

Reestablishing big sagebrush on rangelands now dominated by native perennial grasses, introduced perennial grasses, or exotic annual grasses, particularly cheatgrass (Bromus tectorum), serves to stabilize soil, improve moisture availability and nutrient recyling, increase biological diversity, and foster community stability and resiliency. A first...

75 FR 33239 - Rangeland Allotment Management Planning on the Fall River West and Oglala Geographic Areas, Fall...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-11

...). Vegetation in the Analysis Area is characteristic of mixed-grass prairie and lesser amounts of ponderosa pine/juniper habitats. Short- grass species include blue grama, buffalograss, and upland sedges. Mid- grass...

40 CFR 180.381 - Oxyfluorfen; tolerances for residues.

Code of Federal Regulations, 2011 CFR

2011-07-01

... following food commodities: Commodity Parts per million Blackberry 0.05 Chickpea, seed 0.05 Grass, forage 0.05 Grass, hay 0.05 Grass, seed screenings 0.05 Guava 0.05 Papaya 0.05 Raspberry 0.05 Taro, corm 0.05...

40 CFR 180.381 - Oxyfluorfen; tolerances for residues.

Code of Federal Regulations, 2010 CFR

2010-07-01

... following food commodities: Commodity Parts per million Blackberry 0.05 Chickpea, seed 0.05 Grass, forage 0.05 Grass, hay 0.05 Grass, seed screenings 0.05 Guava 0.05 Papaya 0.05 Raspberry 0.05 Taro, corm 0.05...

Effective Tutorial Ontology Modeling on Organic Rice Farming for Non-Science & Technology Educated Farmers Using Knowledge Engineering

ERIC Educational Resources Information Center

Yanchinda, Jirawit; Chakpitak, Nopasit; Yodmongkol, Pitipong

2015-01-01

Knowledge of the appropriate technologies for sustainable development projects has encouraged grass roots development, which has in turn promoted sustainable and successful community development, which a requirement is to share and reuse this knowledge effectively. This research aims to propose a tutorial ontology effectiveness modeling on organic…

Combined active and passive microwave remote sensing of soil moisture for vegetated surfaces at L-band

USDA-ARS?s Scientific Manuscript database

The distorted Born approximation (DBA) combined with the numerical solutions of Maxwell equations (NMM3D) has been used for the radar backscattering model for the SMAP mission. The models for vegetated surfaces such as wheat, grass, soybean and corn have been validated with the Soil Moisture Active ...

How does altered precipitation and annual grass invasion affect plant N uptake in a native semi-arid shrub community?

NASA Astrophysics Data System (ADS)

Mauritz, M.; Lipson, D.; Cleland, E. E.

2012-12-01

Climate change is expected to alter precipitation patterns, which will change the timing and amount of plant resources. Precipitation patterns determine water and nitrogen (N) availability, because water stimulates microbial N turnover and N transport. In order for plants to utilize water and N, they must coincide with the phenology and meet physiological requirements of the plant. As resource supply shifts, differences in species' ability to acquire resources will affect plant community composition. Semiarid ecosystems, such as shrublands in Southern California, are particularly sensitive to shifts in precipitation because they are severely water limited. This study takes advantage of the altered phenology and resource demands presented by invasive annual grasses in a native semiarid shrubland. The goal is to understand how altered precipitation patterns affect plant N uptake. Rainfall levels were manipulated to 50% and 150% of ambient levels. It is expected that higher rainfall levels promote annual grass invasion because grasses have higher water and N requirements and begin to grow earlier in the season than shrubs. A 15N tracer was added with the first rain event and plant samples were collected regularly to track the movement of N into the plants. Net soil N accumulation was determined using resin bags. Invasive grasses altered the timing and amount of N uptake but amount of rainfall had less effect on N distribution. 15N was detected sooner and at higher level in grasses than shrubs. 24hours after the first rain event 15N was detectable in grasses, 15N accumulated rapidly and peaked 2 months earlier than shrubs. Shrub 15N levels remained at pre-rain event levels for the first 2 months and began to increase at the beginning of spring, peak mid-spring and decline as the shrubs entered summer dormancy. One year later 15N levels in annual grass litter remained high, while 15N levels in shrubs returned to initial background levels as a result of resorption. 15N concentrations are more variable in grasses which could indicate higher plasticity in grass N uptake compared to shrubs. Resin N supports the 15N patterns. Resin N declined more rapidly under grasses and was lower than under shrubs, presumably due to high grass N uptake. Resin N was particularly high under shrubs in wetter conditions indicating that shrubs could not take advantage of high N supply. Together the 15N and resin N patterns indicate that grasses accumulate more N and begin N uptake earlier in the season than shrubs. Although 15N did not differ in response to rainfall, invasion alters the distribution of N in the system. Rain was only manipulated for one growing season; multiple years of altered precipitation may yield significant differences. Early season N uptake by grasses, the low variability in shrub 15N and low shrub 15N in wetter conditions, despite high resin N, indicates that N competition between invasive grasses and native shrubs is weak. If N supply is sufficient for shrub demands, invasive grasses and shrubs could coexist. This study contributes to a broader understanding of how changes in resource supply, plant phenology and functional type interact and respond to climate change.

Imidacloprid sorption and transport in cropland, grass buffer and riparian buffer soils

USGS Publications Warehouse

Satkowski, Laura E.; Goyne, Keith W.; Anderson, Stephen H.; Lerch, Robert N.; Allen, Craig R.; Snow, Daniel D.

2018-01-01

An understanding of neonicotinoid sorption and transport in soil is critical for determining and mitigating environmental risk associated with the most widely used class of insecticides. The objective of this study was to evaluate mobility and transport of the neonicotinoid imidacloprid (ICD) in soils collected from cropland, grass vegetative buffer strip (VBS), and riparian VBS soils. Soils were collected at six randomly chosen sites within grids that encompassed all three land uses. Single-point equilibrium batch sorption experiments were conducted using radio-labeled (14C) ICD to determine solid–solution partition coefficients (Kd). Column experiments were conducted using soils collected from the three vegetation treatments at one site by packing soil into glass columns. Water flow was characterized by applying Br− as a nonreactive tracer. A single pulse of 14C-ICD was then applied, and ICD leaching was monitored for up to 45 d. Bromide and ICD breakthrough curves for each column were simulated using CXTFIT and HYDRUS-1D models. Sorption results indicated that ICD sorbs more strongly to riparian VBS (Kd = 22.6 L kg−1) than crop (Kd = 11.3 L kg−1) soils. Soil organic C was the strongest predictor of ICD sorption (p < 0.0001). The column transport study found mean peak concentrations of ICD at 5.83, 10.84, and 23.8 pore volumes for crop, grass VBS, and riparian VBS soils, respectively. HYDRUS-1D results indicated that the two-site, one-rate linear reversible model best described results of the breakthrough curves, indicating the complexity of ICD sorption and demonstrating its mobility in soil. Greater sorption and longer retention by the grass and riparian VBS soils than the cropland soil suggests that VBS may be a viable means to mitigate ICD loss from agroecosystems, thereby preventing ICD transport into surface water, groundwater, or drinking water resources.

Timothy grass pollen major allergen Phl p 1 activates respiratory epithelial cells by a non-protease mechanism.

PubMed

Röschmann, K; Farhat, K; König, P; Suck, R; Ulmer, A J; Petersen, A

2009-09-01

Group 1 allergens from grass pollen (e.g. Phl p 1, the major allergen of timothy grass Phleum pratense) cause IgE reactivity in about 95% of allergic subjects and exist in all grass species. The respiratory epithelium represents a first line of contact of the immune system with airborne allergens, functions as physical barrier and is an important immunological regulation system. The aim of this study was to investigate the interaction of Phl p 1 with human respiratory epithelium to elucidate the contribution of epithelial cells to the development of allergic reactions. Purified Phl p 1 was used to stimulate A549 cells and transient transfected HEK293 cells. mRNA level of different mediators were investigated by real-time PCR, release of the mediators was determined by ELISA. The 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) test and an ex vivo model of the murine trachea were used to investigate a potential proteolytic activity of Phl p 1. Phl p 1 activates respiratory epithelial cells as measured by induction of IL-6, IL-8 and TGF-beta mRNA and release. Phl p 1, in contrast to Der p 1 from the house dust mite, does not exert proteolytic activity, as investigated by microscopic observation and MTT test. In an ex vivo model of the murine trachea we were able to show that Der p 1, in contrast to Phl p 1, enhances the transportation velocity of particles by the trachea, presumably by ATP released from the injured epithelium. We conclude that under physiological conditions Phl p 1 affects tracheal epithelial cells through a non-proteolytic activity. Enhancement of TGF-beta expression induced by Phl p 1 together with the increased release of IL-6 and IL-8 might provide an indirect mechanism through which the allergen may cross the epithelial barrier and attracts immunocompetent cells.

Comparison of the driving forces of spring phenology among savanna landscapes by including combined spatial and temporal heterogeneity.

PubMed

Zhu, Likai; Southworth, Jane; Meng, Jijun

2015-10-01

Understanding spatial and temporal dynamics of land surface phenology (LSP) and its driving forces are critical for providing information relevant to short- and long-term decision making, particularly as it relates to climate response planning. With the third generation Global Inventory Monitoring and Modeling System (GIMMS3g) Normalized Difference Vegetation Index (NDVI) data and environmental data from multiple sources, we investigated the spatio-temporal changes in the start of the growing season (SOS) in southern African savannas from 1982 through 2010 and determined its linkage to environmental factors using spatial panel data models. Overall, the SOS occurs earlier in the north compared to the south. This relates in part to the differences in ecosystems, with northern areas representing high rainfall and dense tree cover (mainly tree savannas), whereas the south has lower rainfall and sparse tree cover (mainly bush and grass savannas). From 1982 to 2010, an advanced trend was observed predominantly in the tree savanna areas of the north, whereas a delayed trend was chiefly found in the floodplain of the north and bush/grass savannas of the south. Different environmental drivers were detected within tree- and grass-dominated savannas, with a critical division being represented by the 800 mm isohyet. Our results supported the importance of water as a driver in this water-limited system, specifically preseason soil moisture, in determining the SOS in these water-limited, grass-dominated savannas. In addition, the research pointed to other, often overlooked, effects of preseason maximum and minimum temperatures on the SOS across the entire region. Higher preseason maximum temperatures led to an advance of the SOS, whereas the opposite effects of preseason minimum temperature were observed. With the rapid increase in global change research, this work will prove helpful for managing savanna landscapes and key to predicting how projected climate changes will affect regional vegetation phenology and productivity.

Developing Pericarp of Maize: A Model to Study Arabinoxylan Synthesis and Feruloylation

PubMed Central

Chateigner-Boutin, Anne-Laure; Ordaz-Ortiz, José J.; Alvarado, Camille; Bouchet, Brigitte; Durand, Sylvie; Verhertbruggen, Yves; Barrière, Yves; Saulnier, Luc

2016-01-01

Cell walls are comprised of networks of entangled polymers that differ considerably between species, tissues and developmental stages. The cell walls of grasses, a family that encompasses major crops, contain specific polysaccharide structures such as xylans substituted with feruloylated arabinose residues. Ferulic acid is involved in the grass cell wall assembly by mediating linkages between xylan chains and between xylans and lignins. Ferulic acid contributes to the physical properties of cell walls, it is a hindrance to cell wall degradability (thus biomass conversion and silage digestibility) and may contribute to pest resistance. Many steps leading to the formation of grass xylans and their cross-linkages remain elusive. One explanation might originate from the fact that many studies were performed on lignified stem tissues. Pathways leading to lignins and feruloylated xylans share several steps, and lignin may impede the release and thus the quantification of ferulic acid. To overcome these difficulties, we used the pericarp of the maize B73 line as a model to study feruloylated xylan synthesis and crosslinking. Using Fourier-transform infra-red spectroscopy and biochemical analyses, we show that this tissue has a low lignin content and is composed of approximately 50% heteroxylans and approximately 5% ferulic acid. Our study shows that, to date, maize pericarp contains the highest level of ferulic acid reported in plant tissue. The detection of feruloylated xylans with a polyclonal antibody shows that the occurrence of these polysaccharides is developmentally regulated in maize grain. We used the genomic tools publicly available for the B73 line to study the expression of genes within families involved or suggested to be involved in the phenylpropanoid pathway, xylan formation, feruloylation and their oxidative crosslinking. Our analysis supports the hypothesis that the feruloylated moiety of xylans originated from feruloylCoA and is transferred by a member of the BAHD acyltransferase family. We propose candidate genes for functional characterization that could subsequently be targeted for grass crop breeding. PMID:27746801

Infection of Brachypodium distachyon by Formae Speciales of Puccinia graminis: Early Infection Events and Host-Pathogen Incompatibility

PubMed Central

Figueroa, Melania; Alderman, Stephen; Garvin, David F.; Pfender, William F.

2013-01-01

Puccinia graminis causes stem rust, a serious disease of cereals and forage grasses. Important formae speciales of P. graminis and their typical hosts are P. graminis f. sp. tritici (Pg-tr) in wheat and barley, P. graminis f. sp. lolii (Pg-lo) in perennial ryegrass and tall fescue, and P. graminis f. sp. phlei-pratensis (Pg-pp) in timothy grass. Brachypodium distachyon is an emerging genetic model to study fungal disease resistance in cereals and temperate grasses. We characterized the P. graminis-Brachypodium pathosystem to evaluate its potential for investigating incompatibility and non-host resistance to P. graminis. Inoculation of eight Brachypodium inbred lines with Pg-tr, Pg-lo or Pg-pp resulted in sporulating lesions later accompanied by necrosis. Histological analysis of early infection events in one Brachypodium inbred line (Bd1-1) indicated that Pg-lo and Pg-pp were markedly more efficient than Pg-tr at establishing a biotrophic interaction. Formation of appressoria was completed (60–70% of germinated spores) by 12 h post-inoculation (hpi) under dark and wet conditions, and after 4 h of subsequent light exposure fungal penetration structures (penetration peg, substomatal vesicle and primary infection hyphae) had developed. Brachypodium Bd1-1 exhibited pre-haustorial resistance to Pg-tr, i.e. infection usually stopped at appressorial formation. By 68 hpi, only 0.3% and 0.7% of the Pg-tr urediniospores developed haustoria and colonies, respectively. In contrast, development of advanced infection structures by Pg-lo and Pg-pp was significantly more common; however, Brachypodium displayed post-haustorial resistance to these isolates. By 68 hpi the percentage of urediniospores that only develop a haustorium mother cell or haustorium in Pg-lo and Pg-pp reached 8% and 5%, respectively. The formation of colonies reached 14% and 13%, respectively. We conclude that Brachypodium is an apt grass model to study the molecular and genetic components of incompatiblity and non-host resistance to P. graminis. PMID:23441218

Late-Quaternary variation in C3 and C4 grass abundance in southeastern Australia as inferred from δ13C analysis: Assessing the roles of climate, pCO2, and fire

NASA Astrophysics Data System (ADS)

Nelson, David M.; Urban, Michael A.; Kershaw, A. Peter; Hu, Feng Sheng

2016-05-01

Climate, atmospheric pCO2, and fire all may exert major influences on the relative abundance of C3 and C4 grasses in the present-day vegetation. However, the relative role of these factors in driving variation in C3 and C4 grass abundances in the paleorecord is uncertain, and C4 abundance is often interpreted narrowly as a proxy indicator of aridity or pCO2. We measured δ13C values of individual grains of grass (Poaceae) pollen in the sediments of two sites in southeastern Australia to assess changes in the proportions of C3 and C4 grasses during the past 25,000 years. These data were compared with shifts in pCO2, temperature, moisture balance, and fire to assess how these factors were related to long-term variation of C4 grass abundance during the late Quaternary. At Caledonia Fen, a high-elevation site in the Snowy Mountains, C4 grass abundance decreased from an average of 66% during the glacial period to 11% during the Holocene, primarily in response to increased pCO2 and temperature. In contrast, this pattern did not exist in low-elevation savannah woodlands around Tower Hill Northwest Crater, where C4 grass abundance instead varied in response to shifts in regional aridity. Fire did not appear to have strongly influenced the proportions of C3 and C4 grasses on the landscape at millennial timescales at either site. These patterns are similar to those of a recent study in East Africa, suggesting that elevation-related climatic differences influence how the abundance of C3 and C4 grasses responds to shifts in climate and pCO2. These results caution against using C4 plant abundance as a proxy indicator of either climate or pCO2 without an adequate understanding of key controlling factors.

Streptococcus caviae sp. nov., isolated from guinea pig faecal samples.

PubMed

Palakawong Na Ayudthaya, Susakul; Hilderink, Loes J; Oost, John van der; Vos, Willem M de; Plugge, Caroline M

2017-05-01

A novel cellobiose-degrading and lactate-producing bacterium, strain Cavy grass 6T, was isolated from faecal samples of guinea pigs (Cavia porcellus). Cells of the strain were ovalshaped, non-motile, non-spore-forming, Gram-stain-positive and facultatively anaerobic. The strain gr at 25-40 °C (optimum 37 °C) and pH 4.5-9.5 (optimum 8.0). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Cavy grass 6T belongs to the genus Streptococcus with its closest relative being Streptococcus devriesei CCUG 47155T with only 96.5 % similarity. Comparing strain Cavy grass 6T and Streptococcus devriesei CCUG 47155T, average nucleotide identity and level of digital DNA-DNA hybridization dDDH were only 86.9 and 33.3 %, respectively. Housekeeping genes groEL and gyrA were different between strain Cavy grass 6T and other streptococci. The G+C content of strain Cavy grass 6T was 42.6±0.3 mol%. The major (>10 %) cellular fatty acids of strain Cavy grass 6T were C16:0, C20 : 1ω9c and summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c). Strain Cavy grass 6T ferment a range of plant mono- and disaccharides as well as polymeric carbohydrates, including cellobiose, dulcitol, d-glucose, maltose, raffinose, sucrose, l-sorbose, trehalose, inulin and dried grass extract, to lactate, formate, acetate and ethanol. Based on phylogenetic and physiological characteristics, Cavy grass 6T can be distinguished from other members of the genus Streptococcus. Therefore, a novel species of the genus Streptococcus, family Streptococcaceae, order Lactobacillales is proposed, Streptococcuscaviae sp. nov. (type strain Cavy grass 6T=TISTR 2371T=DSM 102819T).

Sensitivity to tomato and peanut allergens in children monosensitized to grass pollen.

PubMed

de Martino, M; Novembre, E; Cozza, G; de Marco, A; Bonazza, P; Vierucci, A

1988-04-01

Possible associations between allergy to grass pollen and positive skin tests to food allergens were studied in 102 children monosensitized (as to inhalant allergens) to grass pollen, and in 117 children monosensitized (as to inhalant allergens) to Dermatophagoides. Thirty-two foods were tested by an epicutaneous method. Positive skin tests to food allergens were more frequent in children with allergy to grass pollen (59.8%) than in children with allergy to Dermatophagoides (9.4%). A considerably high frequency of positive reactions to tomato (39.2%), peanut (22,5%), green pea (13.7%), and wheat (11.7%) was observed in children with allergy to grass pollen. Positive skin tests to peanut closely correlated with positive RAST results and nasal provocation tests, whereas in children with skin test positivity to tomato a close correlation with nasal provocation tests but a 45% correlation with a positive RAST result were observed. RAST inhibition experiments were carried out, and the results may suggest the presence of cross-reacting IgE to grass pollen, tomato, and peanut antigens. Clinical implications of these findings are discussed in the light of histories of food hypersensitivity, urticaria-angioedema, and atopic dermatitis in children with allergy to grass pollen.

Anaerobic digestion of grass: the effect of temperature applied during the storage of substrate on the methane production.

PubMed

Míchal, Pavel; Švehla, Pavel; Plachý, Vladimír; Tlustoš, Pavel

2017-07-01

Within this research, biogas production, representation of methane in biogas and volatile solids (VSs) removal efficiency were compared using batch tests performed with the samples of intensively and extensively planted grasses originating from public areas. Before the batch tests, the samples were stored at different temperatures achievable on biogas plants applying trigeneration strategy (-18°C, +3°C, +18°C and +35°C). Specific methane production from intensively planted grasses was relatively high (0.33-0.41 m 3 /kg VS) compared to extensively planted grasses (0.20-0.33 m 3 /kg VS). VSs removal efficiency reached 59.8-68.8% for intensively planted grasses and 34.6-56.5% for extensively planted grasses. Freezing the intensively planted grasses at -18°C proved to be an effective thermal pretreatment leading to high biogas production (0.61 m 3 /kg total solid (TS)), high representation of methane (64.0%) in biogas and good VSs removal efficiency (68.8%). The results of this research suggest that public areas or sport parks seem to be available, cheap and at the same time very effective feedstock for biogas production.

Ecological risk assessment of Grass Carp (Ctenopharyngodon idella) for the Great Lakes Basin

USGS Publications Warehouse

Kolar, Cynthia S.; Cudmore, Becky

2017-01-01

Grass Carp (Ctenopharyngodon idella) is an herbivorous, freshwater fish that was first introduced in the United States in the early 1960s for use in biological control of aquatic vegetation. It has since escaped and dispersed through the Mississippi River basin towards the Great Lakes. To characterize the risk of Grass Carp to the Great Lakes basin, a binational ecological risk assessment of Grass Carp was conducted.This risk assessment covered both triploid (sterile) and diploid (fertile) Grass Carp and assessed the likelihood of arrival, survival, establishment, and spread, and the magnitude of the ecological consequences within 5, 10, 20 and 50 years from 2014 (i.e., the baseline year) to the connected Great Lakes basin (defined as the Great Lakes basin and its tributaries to the first impassable barrier; risk was assessed based on current climate conditions and at the individual lake scale but does not address a finer geographical scale (e.g., bay or sub-region).For triploid Grass Carp, the probability of occurrence (likelihood of arrival, survival, and spread) was assessed, and for diploid Grass Carp the probability of introduction (likelihood of arrival, survival, establishment and spread) was assessed.

Preliminary studies on allelopatic effect of some woody plants on seed germination of rye-grass and tall fescue.

PubMed

Arouiee, H; Nazdar, T; Mousavi, A

2010-11-01

In order to investigation of allelopathic effects of some ornamental trees on seed germination of rye-grass (Lolium prenne) and tall fescue (Festuca arundinaceae), this experiment was conducted in a randomized complete block design with 3 replicates at the laboratory of Horticultural Sciences Department of Ferdowsi University of Mashhad, during 2008. In this research, we studied the effect of aqueous and hydro-alcoholic extracts of Afghanistan pine (Pinus eldarica), arizona cypress (Cupressus arizonica), black locust (Robinia psedue acacia) and box elder (Acer negundo) leaves that prepared in 1:5 ratio on seed germination percent and rate for two grasses. The results showed that all extracts decreased statistically seed germination in compared to control treatment. The highest germination percentage and germination rate of tested grass detected in control treatment. Hydro-alcoholic extracts of all woody plants (15, 30%) were completely inhibited seed germination of rye-grass and tall fescue. Also aqueous extract of arizona cypress was completely inhibited seed germination of tall fescue and had more inhibitory activity than other aqueous extracts on rye-grass. Between aqueous extracts, the highest and lowest seed germination of rye-grass was found in Afghanistan pine and arizona cypress, respectively.

Pollutant tracking for 3 Western North Atlantic sea grasses by remote sensing: Preliminary diminishing white light responses of Thalassia testudinum, Halodule wrightii, and Zostera marina.

PubMed

Thorhaug, Anitra; Berlyn, Graeme P; Poulos, Helen M; Goodale, Uromi M

2015-08-15

Sea grasses are foundation species for estuarine ecosystems. The available light for sea grasses diminishes rapidly during pollutant spills, effluent releases, disturbances such as intense riverine input, and tidal changes. We studied how sea grasses' remote-sensing signatures and light-capturing ability respond to short term light alterations. In vivo responses were measured over the entire visible-light spectra to diminishing white-light on whole-living-plants' spectral reflectance, including 6h of full oceanic-light fluences from 10% to 100%. We analyzed differences by various reflectance indices. We compared the sea grasses species responses of tropical vs. temperate and intertidals (Halodule wrightii, and Zostera marina) vs. subtidal (Thalassia testudinum). Reflectance diminished with decreasing light intensity that coincided with greater accessory pigment stimulation (anthocyanin, carotenoids, xanthins). Chlorophyll a and Chlorophyll b differed significantly among species (Thalassia vs. Halodule). Photosynthetic efficiency diminished at high light intensities. The NDVI index was inadequate to perceive these differences. Our results demonstrate the leaf-level utility of data to remote sensing for mapping sea grass and sea grass stress. Copyright © 2015 Elsevier Ltd. All rights reserved.

7 CFR 1469.3 - Definitions.

Code of Federal Regulations, 2011 CFR

2011-01-01

... grasses and legumes; summer fallow; typically cropped wet areas, such as rice fields, rotated to wildlife... machine harvested. The crop may be grasses, legumes, or a combination of both. Incidental forest land... mixture, or a grass-legume mixture. Management usually consists of cultural treatments: fertilization...

Using reinforced native grass sod for biostrips, bioswales, and sediment control.

DOT National Transportation Integrated Search

2008-12-01

The objective of this research was to develop and demonstrate native grass sod for sediment control from disturbed lands associated with California highways. The research evaluated native grass species for inclusion in sod and evaluated the sod at a ...

26 CFR 56.4911-5 - Communications with members.

Code of Federal Regulations, 2011 CFR

2011-04-01

... lobbying expenditures even though those expenditures would be grass roots expenditures if the communication... communication does not directly encourage the member to engage in grass roots lobbying (whether individually or... lobbying. (d) Communications (directed only to members) that are grass roots lobbying communications...

26 CFR 56.4911-5 - Communications with members.

Code of Federal Regulations, 2010 CFR

2010-04-01

... lobbying expenditures even though those expenditures would be grass roots expenditures if the communication... communication does not directly encourage the member to engage in grass roots lobbying (whether individually or... lobbying. (d) Communications (directed only to members) that are grass roots lobbying communications...

Lessons learned in managing alfalfa-grass mixtures

USDA-ARS?s Scientific Manuscript database

Grass-alfalfa mixtures have a number of benefits that make them attractive to producers. However, they can be problematic to establish and maintain. Research programs have made progress in understanding the benefits and challenges of alfalfa-grass mixtures. Mixtures may have greater winter survival ...

Investigation of the Acoustics of Marine Sediments Using an Impedance Tube and Continued Investigation of the Acoustics of Marine Sediments Using Impedance Tube and Acoustic Resonator Techniques

DTIC Science & Technology

2010-08-02

properties of three gulf-coast species, Thalassia testudinum (turtle grass), Syringodium filiforme (manatee grass), and Halodule wrightii (shoal... Thalassia testudinum (turtle grass) is shown in Fig. 12. The two curves show plant volume fraction Vleaves/Vlot (measured by acoustic and image-based...cross-section image analysis (Fig. 13), was found to be X\\<*t = 0.23. Similar results were found the Thalassia testudinum (turtle grass) rhizomes

Brachypodium distachyon genetic resources

USDA-ARS?s Scientific Manuscript database

Brachypodium distachyon is a well-established model species for the grass family Poaceae. It possesses an array of features that make it suited for this purpose, including a small sequenced genome, simple transformation methods, and additional functional genomics tools. However, the most critical to...

Grassland-shrubland state transitions in arid lands: Competition matters

USDA-ARS?s Scientific Manuscript database

Background/Question/Methods: State transition from grassland to shrubland is synonymous with desertification in many dryland systems. The classic desertification model emphasizes abiotic feedbacks that modify the physical environment in ways that promote shrub proliferation and impede grass survival...

Modeled Changes in Potential Grassland Productivity and in Grass-Fed Ruminant Livestock Density in Europe over 1961-2010.

PubMed

Chang, Jinfeng; Viovy, Nicolas; Vuichard, Nicolas; Ciais, Philippe; Campioli, Matteo; Klumpp, Katja; Martin, Raphaël; Leip, Adrian; Soussana, Jean-François

2015-01-01

About 25% of European livestock intake is based on permanent and sown grasslands. To fulfill rising demand for animal products, an intensification of livestock production may lead to an increased consumption of crop and compound feeds. In order to preserve an economically and environmentally sustainable agriculture, a more forage based livestock alimentation may be an advantage. However, besides management, grassland productivity is highly vulnerable to climate (i.e., temperature, precipitation, CO2 concentration), and spatial information about European grassland productivity in response to climate change is scarce. The process-based vegetation model ORCHIDEE-GM, containing an explicit representation of grassland management (i.e., herbage mowing and grazing), is used here to estimate changes in potential productivity and potential grass-fed ruminant livestock density across European grasslands over the period 1961-2010. Here "potential grass-fed ruminant livestock density" denotes the maximum density of livestock that can be supported by grassland productivity in each 25 km × 25 km grid cell. In reality, livestock density could be higher than potential (e.g., if additional feed is supplied to animals) or lower (e.g., in response to economic factors, pedo-climatic and biotic conditions ignored by the model, or policy decisions that can for instance reduce livestock numbers). When compared to agricultural statistics (Eurostat and FAOstat), ORCHIDEE-GM gave a good reproduction of the regional gradients of annual grassland productivity and ruminant livestock density. The model however tends to systematically overestimate the absolute values of productivity in most regions, suggesting that most grid cells remain below their potential grassland productivity due to possible nutrient and biotic limitations on plant growth. When ORCHIDEE-GM was run for the period 1961-2010 with variable climate and rising CO2, an increase of potential annual production (over 3%) per decade was found: 97% of this increase was attributed to the rise in CO2, -3% to climate trends and 15% to trends in nitrogen fertilization and deposition. When compared with statistical data, ORCHIDEE-GM captures well the observed phase of climate-driven interannual variability in grassland production well, whereas the magnitude of the interannual variability in modeled productivity is larger than the statistical data. Regional grass-fed livestock numbers can be reproduced by ORCHIDEE-GM based on its simple assumptions and parameterization about productivity being the only limiting factor to define the sustainable number of animals per unit area. Causes for regional model-data misfits are discussed, including uncertainties in farming practices (e.g., nitrogen fertilizer application, and mowing and grazing intensity) and in ruminant diet composition, as well as uncertainties in the statistical data and in model parameter values.

Modeled Changes in Potential Grassland Productivity and in Grass-Fed Ruminant Livestock Density in Europe over 1961–2010

PubMed Central

Chang, Jinfeng; Viovy, Nicolas; Vuichard, Nicolas; Ciais, Philippe; Campioli, Matteo; Klumpp, Katja; Martin, Raphaël; Leip, Adrian; Soussana, Jean-François

2015-01-01

About 25% of European livestock intake is based on permanent and sown grasslands. To fulfill rising demand for animal products, an intensification of livestock production may lead to an increased consumption of crop and compound feeds. In order to preserve an economically and environmentally sustainable agriculture, a more forage based livestock alimentation may be an advantage. However, besides management, grassland productivity is highly vulnerable to climate (i.e., temperature, precipitation, CO2 concentration), and spatial information about European grassland productivity in response to climate change is scarce. The process-based vegetation model ORCHIDEE-GM, containing an explicit representation of grassland management (i.e., herbage mowing and grazing), is used here to estimate changes in potential productivity and potential grass-fed ruminant livestock density across European grasslands over the period 1961–2010. Here “potential grass-fed ruminant livestock density” denotes the maximum density of livestock that can be supported by grassland productivity in each 25 km × 25 km grid cell. In reality, livestock density could be higher than potential (e.g., if additional feed is supplied to animals) or lower (e.g., in response to economic factors, pedo-climatic and biotic conditions ignored by the model, or policy decisions that can for instance reduce livestock numbers). When compared to agricultural statistics (Eurostat and FAOstat), ORCHIDEE-GM gave a good reproduction of the regional gradients of annual grassland productivity and ruminant livestock density. The model however tends to systematically overestimate the absolute values of productivity in most regions, suggesting that most grid cells remain below their potential grassland productivity due to possible nutrient and biotic limitations on plant growth. When ORCHIDEE-GM was run for the period 1961–2010 with variable climate and rising CO2, an increase of potential annual production (over 3%) per decade was found: 97% of this increase was attributed to the rise in CO2, -3% to climate trends and 15% to trends in nitrogen fertilization and deposition. When compared with statistical data, ORCHIDEE-GM captures well the observed phase of climate-driven interannual variability in grassland production well, whereas the magnitude of the interannual variability in modeled productivity is larger than the statistical data. Regional grass-fed livestock numbers can be reproduced by ORCHIDEE-GM based on its simple assumptions and parameterization about productivity being the only limiting factor to define the sustainable number of animals per unit area. Causes for regional model-data misfits are discussed, including uncertainties in farming practices (e.g., nitrogen fertilizer application, and mowing and grazing intensity) and in ruminant diet composition, as well as uncertainties in the statistical data and in model parameter values. PMID:26018186

Effects of high-sugar ryegrass silage and mixtures with red clover silage on ruminant digestion. 2. Lipids.

PubMed

Lee, M R F; Connelly, P L; Tweed, J K S; Dewhurst, R J; Merry, R J; Scollan, N D

2006-11-01

The experiment investigated the digestion of lipids from different forage silages in beef steers. Six Hereford x Friesian steers prepared with rumen and duodenal cannulas were given ad libitum access to a high-sugar grass silage, control grass silage, red clover silage, or mixtures of the red clover and each of the grass silages (50:50, DM basis). The experiment was conducted as an incomplete 5 x 5 Latin square, with an additional randomly repeated sequence. Total fatty acid and C18:3n-3 concentrations were greater (P < 0.05) for the high-sugar grass silage than the control grass silage or the red clover silage. Dry matter and total fatty acid intake were less (P < 0.05) for steers fed the control grass silage than for steers fed the other diets. Duodenal flow of C18:3n-3 was greater (P < 0.05), and flows of C18:0 and total C18:1 trans were less (P < 0.05), for the red clover silage compared with the 2 grass silage diets, with the mixtures intermediate. These results were supported by a reduction (P < 0.05) in biohydrogenation of C18:3n-3 for the red clover silage, with the mixtures again being intermediate. Flows of total branched- and odd-chain fatty acids were greater (P < 0.05) for the high-sugar grass silage diet, possibly as a result of greater microbial flow, because these fatty acids are associated with bacterial lipid. Duodenal flows of the chlorophyll metabolite, phytanic acid, were greater (P < 0.05) for animals fed the high-sugar grass silage treatments compared with the other treatments. These results confirm the potential for modifying the fatty acid composition of ruminant products by feeding red clover silage.

The Effects of Seed Ingestion by Livestock, Dung Fertilization, Trampling, Grass Competition and Fire on Seedling Establishment of Two Woody Plant Species

PubMed Central

Tjelele, Julius; Ward, David; Dziba, Luthando

2015-01-01

The increasing rate of woody plant encroachment in grasslands or savannas remains a challenge to livestock farmers. The causes and control measures of woody plant encroachment are of common interest, especially where it negatively affects the objectives of an agricultural enterprise. The objectives of this study were to determine the effects of gut passage (goats, cattle), dung (nutrients), fire, grass competition and trampling on establishment of A. nilotica and D. cinerea seedlings. Germination trials were subjected to the following treatments: 1) seed passage through the gut of cattle and goats and unpassed/ untreated seeds (i.e. not ingested), 2) dung and control (no dung), 3) grass and control (mowed grass), 4) fire and control (no fire), 5) trampling and control (no trampling). The interaction of animal species, grass and fire had an effect on seedling recruitment (P < 0.0052). Seeds retrieved from goats and planted with no grass and with fire (6.81% ± 0.33) had a significant effect on seedling recruitment than seeds retrieved from goats and planted with grass and no fire (2.98% ± 0.33). Significantly more D. cinerea and A. nilotica seeds germinated following seed ingestion by goats (3.59% ± 0.16) than cattle (1.93% ± 0.09) and control or untreated seeds (1.69% ± 0.11). Less dense grass cover, which resulted in reduced grass competition with tree seedlings for light, space and water, and improved seed scarification due to gut passage were vital for emergence and recruitment of Acacia seedlings. These results will contribute considerably to the understanding of the recruitment phase of woody plant encroachment. PMID:25695765

Molecular evolution of hypoallergenic hybrid proteins for vaccination against grass pollen allergy.

PubMed

Linhart, Birgit; Focke-Tejkl, Margarete; Weber, Milena; Narayanan, Meena; Neubauer, Angela; Mayrhofer, Hannes; Blatt, Katharina; Lupinek, Christian; Valent, Peter; Valenta, Rudolf

2015-04-15

More than 10% of the population in Europe and North America suffer from IgE-associated allergy to grass pollen. In this article, we describe the development of a vaccine for grass pollen allergen-specific immunotherapy based on two recombinant hypoallergenic mosaic molecules, designated P and Q, which were constructed out of elements derived from the four major timothy grass pollen allergens: Phl p 1, Phl p 2, Phl p 5, and Phl p 6. Seventeen recombinant mosaic molecules were expressed and purified in Escherichia coli using synthetic genes, characterized regarding biochemical properties, structural fold, and IgE reactivity. We found that depending on the arrangement of allergen fragments, mosaic molecules with strongly varying IgE reactivity were obtained. Based on an extensive screening with sera and basophils from allergic patients, two hypoallergenic mosaic molecules, P and Q, incorporating the primary sequence elements of the four grass pollen allergens were identified. As shown by lymphoproliferation experiments, they contained allergen-specific T cell epitopes required for tolerance induction, and upon immunization of animals induced higher allergen-specific IgG Abs than the wild-type allergens and a registered monophosphoryl lipid A-adjuvanted vaccine based on natural grass pollen allergen extract. Moreover, IgG Abs induced by immunization with P and Q inhibited the binding of patients' IgE to natural allergens from five grasses better than IgG induced with the wild-type allergens or an extract-based vaccine. Our results suggest that vaccines based on the hypoallergenic grass pollen mosaics can be used for immunotherapy of grass pollen allergy. Copyright © 2015 by The American Association of Immunologists, Inc.

A molecular identification system for grasses: a novel technology for forensic botany.

PubMed

Ward, J; Peakall, R; Gilmore, S R; Robertson, J

2005-09-10

Our present inability to rapidly, accurately and cost-effectively identify trace botanical evidence remains the major impediment to the routine application of forensic botany. Grasses are amongst the most likely plant species encountered as forensic trace evidence and have the potential to provide links between crime scenes and individuals or other vital crime scene information. We are designing a molecular DNA-based identification system for grasses consisting of several PCR assays that, like a traditional morphological taxonomic key, provide criteria that progressively identify an unknown grass sample to a given taxonomic rank. In a prior study of DNA sequences across 20 phylogenetically representative grass species, we identified a series of potentially informative indels in the grass mitochondrial genome. In this study we designed and tested five PCR assays spanning these indels and assessed the feasibility of these assays to aid identification of unknown grass samples. We confirmed that for our control set of 20 samples, on which the design of the PCR assays was based, the five primer combinations produced the expected results. Using these PCR assays in a 'blind test', we were able to identify 25 unknown grass samples with some restrictions. Species belonging to genera represented in our control set were all correctly identified to genus with one exception. Similarly, genera belonging to tribes in the control set were correctly identified to the tribal level. Finally, for those samples for which neither the tribal or genus specific PCR assays were designed, we could confidently exclude these samples from belonging to certain tribes and genera. The results confirmed the utility of the PCR assays and the feasibility of developing a robust full-scale usable grass identification system for forensic purposes.

Beta-Expansin of Bermuda, Johnson, and Para grass pollens, is a major cross-reactive allergen for Allergic Rhinitis patients in subtropical climate.

PubMed

Pacharn, Punchama; Songnual, Wisuwat; Siriwatanakul, Umaporn; Thongngarm, Torpong; Reamtong, Onrapak; Jirapongsananuruk, Orathai; Bunnag, Chawewan; Piboonpocanun, Surapon

2018-03-12

Subtropical grass pollens of Bermuda (BGP), Johnson (JGP), and Para or buffalo grass (PGP), are common causes of pollen allergies in warm climate area. Allergic rhinitis (AR) patients had positive skin prick test (SPT) to extract of these 3 grass pollens. However, no allergenic proteins of 3 grass pollens have never been studied. To identify major allergens of BGP, JGP, and PGP in Thai grass pollen-allergic patients and to examine their sIgE cross-reactivity. Serum of nine AR patients with positive SPT to at least 2 of 3 studied pollens were collected. Based on availability, only ImmunoCAP of BGP and JGP were available to determine a level of sIgE. Profiles of sIgE bound proteins from BGP, JGP, and PGP, were obtained by immunoblot. Major IgE bound protein was identified by liquid chromatography-tandem mass spectrophotometry (LC-MS/MS). Cross-reactivity of purified major allergen of the 3 grass pollens was determined by inhibition of sIgE in both ELISA and immunoblot. AR patients who have positive SPT to extract of BGP, JGP, and PGP, were 9, 8, and 6, respectively. Positive sIgE (> 0.35 kUA/L) to BGP and JGP were found in 9 and 8 patients, respectively. Eight profiles of IgE bound proteins of the 3 grass pollens showed 29-30 kDa pollen protein as major allergen and was identified as beta-expansin (ExpB). Moreover, purified ExpB of the 3 grass pollens cross-inhibited serum sIgE. ~30 kDa ExpB of BGP, JGP, and PGP, is major cross-reactive allergen for AR Thai patients.

A systematic review of wild grass exploitation in relation to emerging cereal cultivation throughout the Epipalaeolithic and aceramic Neolithic of the Fertile Crescent

PubMed Central

Riehl, Simone; Zeidi, Mohsen; Conard, Nicholas J.

2018-01-01

The present study investigates the occurrence of wild grasses at Epipalaeolithic and aceramic Neolithic sites in the Near East in order to assess their role in subsistence economies alongside the emergence of cereal cultivation. We use Chogha Golan in the foothills of the central Zagros Mountains (ca. 11.7–9.6 ka cal. BP) as a case study, where the archaeobotanical data suggest the frequent exploitation of a complex of wild grasses for almost 2,000 years. Domesticated emmer replaced these wild grasses as the major food resources towards the end of occupation at the site (ca. 9.8 ka cal. BP). We discuss possible implications of this development and conclude that the traditional concept of pre-domestication cultivation seems unsuited for explaining the patterns from Chogha Golan. These data are in good accordance with the overall picture in the Zagros Mountains, where wild grasses were routinely gathered throughout the early Holocene. In contrast, wild grasses were gradually replaced by wild cereals in the Levantine corridor since the end of the Pleistocene. However, several sites located in this region provide evidence for a continuous exploitation of wild grasses alongside emerging cereal cultivation and most of these taxa were part of the earliest segetal floras that evolved with the appearance of domestic cereals throughout the 11th millennium cal. BP. Some sites contemporary to the Pre-Pottery Neolithic B still provide evidence for the usage of wild grasses, which possibly reflects the utilization of edible arable weeds and continuous gathering of wild grasses by more mobile groups. PMID:29293519

Tree cover in sub-Saharan Africa: rainfall and fire constrain forest and savanna as alternative stable states.

PubMed

Staver, A Carla; Archibald, Sally; Levin, Simon

2011-05-01

Savannas are known as ecosystems with tree cover below climate-defined equilibrium values. However, a predictive framework for understanding constraints on tree cover is lacking. We present (a) a spatially extensive analysis of tree cover and fire distribution in sub-Saharan Africa, and (b) a model, based on empirical results, demonstrating that savanna and forest may be alternative stable states in parts of Africa, with implications for understanding savanna distributions. Tree cover does not increase continuously with rainfall, but rather is constrained to low (<50%, "savanna") or high tree cover (>75%, "forest"). Intermediate tree cover rarely occurs. Fire, which prevents trees from establishing, differentiates high and low tree cover, especially in areas with rainfall between 1000 mm and 2000 mm. Fire is less important at low rainfall (<1000 mm), where rainfall limits tree cover, and at high rainfall (>2000 mm), where fire is rare. This pattern suggests that complex interactions between climate and disturbance produce emergent alternative states in tree cover. The relationship between tree cover and fire was incorporated into a dynamic model including grass, savanna tree saplings, and savanna trees. Only recruitment from sapling to adult tree varied depending on the amount of grass in the system. Based on our empirical analysis and previous work, fires spread only at tree cover of 40% or less, producing a sigmoidal fire probability distribution as a function of grass cover and therefore a sigmoidal sapling to tree recruitment function. This model demonstrates that, given relatively conservative and empirically supported assumptions about the establishment of trees in savannas, alternative stable states for the same set of environmental conditions (i.e., model parameters) are possible via a fire feedback mechanism. Integrating alternative stable state dynamics into models of biome distributions could improve our ability to predict changes in biome distributions and in carbon storage under climate and global change scenarios.

Direct leaf wetness measurements and its numerical analysis using a multi-layer atmosphere-soil-vegetation model at a grassland site in pre-alpine region in Germany

NASA Astrophysics Data System (ADS)

Katata, Genki; Held, Andreas; Mauder, Matthias

2014-05-01

The wetness of plant leaf surfaces (leaf wetness) is important in meteorological, agricultural, and environmental studies including plant disease management and the deposition process of atmospheric trace gases and particles. Although many models have been developed to predict leaf wetness, wetness data directly measured at the leaf surface for model validations are still limited. In the present study, the leaf wetness was monitored using seven electrical sensors directly clipped to living leaf surfaces of thin and broad-leaved grasses. The measurements were carried out at the pre-alpine grassland site in TERestrial ENvironmental Observatories (TERENO) networks in Germany from September 20 to November 8, 2013. Numerical simulations of a multi-layer atmosphere-SOiL-VEGetation model (SOLVEG) developed by the authors were carried out for analyzing the data. For numerical simulations, the additional routine meteorological data of wind speed, air temperature and humidity, radiation, rainfall, long-wave radiative surface temperature, surface fluxes, ceilometer backscatter, and canopy or snow depth were used. The model reproduced well the observed leaf wetness, net radiation, momentum and heat, water vapor, and CO2 fluxes, surface temperature, and soil temperature and moisture. In rain-free days, a typical diurnal cycle as a decrease and increase during the day- and night-time, respectively, was observed in leaf wetness data. The high wetness level was always monitored under rain, fog, and snowcover conditions. Leaf wetness was also often high in the early morning due to thawing of leaf surface water frozen during a cold night. In general, leaf wetness was well correlated with relative humidity (RH) in condensation process, while it rather depended on wind speed in evaporation process. The comparisons in RH-wetness relations between leaf characteristics showed that broad-leaved grasses tended to be wetter than thin grasses.

Soil C storage and greenhouse gas emission perennial grasses managed for bio energy feedstock

USDA-ARS?s Scientific Manuscript database

Perennial grasses like switchgrass or big bluestem when managed as bioenergy feedstock require nitrogenous inputs. Nitrogen fertilizer frequently cause nitrous oxide emission. Therefore, managing grasses as feedstock may reduce the greenhouse gas (GHG) mitigation potential expected from perennial. ...