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Sample records for gunther tulip retrievable

  1. Evaluation of Retrievability of the Gunther Tulip Vena Cava Filter

    SciTech Connect

    Yamagami, Takuji Kato, Takeharu; Hirota, Tatsuya; Yoshimatsu, Rika; Matsumoto, Tomohiro; Nishimura, Tsunehiko

    2007-04-15

    Purpose. To evaluate the feasibility and safety of withdrawal of a Gunther tulip retrievable vena cava filter (GTF). Methods. Between June 2001 and December 2005, at our institution 86 GTFs were implanted for temporary caval filtration in 59 patients (37 women, 22 men; mean age 59.3 years, range 18-87 years). For GTFs retrieved thereafter, we retrospectively reviewed the following parameters: rate of success in retrieval, degree of trapped thrombus in the filter, and complications during retrieval. Results. Worsening of or new development of pulmonary embolism after filter implantation did not occur in any patient. Of the 86 GTFs implanted, retrieval of 80 was attempted. Among those 80 filters, 77 (96%) were successfully retrieved (with the standard method, n = 72; with the modified method, n = 5) without any complication. The period of implantation of the retrieved filters was 13.4 {+-} 4.2 days. In the 5 filters that were filled to a height of {>=} 1/4 with trapped thrombus, retrieval was performed after attempts were made to decrease trapped thrombi. In addition, a temporary filter or another GTF was temporarily placed at the cephalad level of the GTF during this removal procedure. Conclusion. GTFs can be retrieved in the majority of cases. Even when encountering situations in which the filter could not be removed using the standard method, withdrawal was possible in a high frequency of cases through various trials using modified methods.

  2. Gunther Tulip Retrievable Inferior Vena Caval Filters: Indications, Efficacy, Retrieval, and Complications

    SciTech Connect

    Looby, S.; Given, M.F.; Geoghegan, T.; McErlean, A.; Lee, M.J.

    2007-02-15

    Purpose. We evaluated the Gunther Tulip (GT) retrievable inferior vena cava (IVC) filter with regard to indications, filtration efficacy, complications, retrieval window, and use of anticoagulation. Method. A retrospective study was performed of 147 patients (64 men, 83 women; mean age 58.8 years) who underwent retrievable GT filter insertion between 2001 and 2005. The indications for placement included a diagnosis of pulmonary embolism or deep venous thrombosis with a contraindication to anticoagulation (n = 68), pulmonary embolism or deep venous thrombosis while on anticoagulation (n = 49), prophylactic filter placement for high-risk surgical patients with a past history of pulmonary embolism or deep venous thrombosis (n = 20), and a high risk of pulmonary embolism or deep venous thrombosis (n = 10). Forty-nine of the 147 patients did not receive anticoagulation (33.7%) while 96 of 147 patients did, 82 of these receiving warfarin (56.5%), 11 receiving low-molecular weight heparins (7.58%), and 3 receiving antiplatelet agents alone (2.06%). Results. Filter placement was successful in 147 patients (100%). Two patients had two filters inserted. Of the 147 patients, filter deployment was on a permanent basis in 102 and with an intention to retrieve in 45 patients. There were 36 (80%) successful retrievals and 9 (20%) failed retrievals. The mean time to retrieval was 33.6 days. The reasons for failed retrieval included filter struts tightly adherent to the IVC wall (5/9), extreme filter tilt (2/9), and extensive filter thrombus (2/9). Complications included pneumothorax (n = 4), failure of filter expansion (n = 1), and breakthrough pulmonary embolism (n = 1). No IVC thrombotic episodes were recorded. Discussion. The Gunther Tulip retrievable filter can be used as a permanent or a retrievable filter. It is safe and efficacious. GT filters can be safely retrieved at a mean time interval of 33.6 days. The newly developed Celect filter may extend the retrieval interval.

  3. Factors affecting Cook Gunther Tulip and Cook Celect inferior vena cava filter retrieval success.

    PubMed

    Glocker, Roan J; Novak, Zdenek; Matthews, Thomas C; Patterson, Mark A; Jordan, William D; Pearce, Benjamin J; Passman, Marc A

    2014-01-01

    Success rates vary for the retrieval of inferior vena cava filters (IVCFs). The optimal retrieval time and factors influencing retrieval success remain unproven. This study aims to determine optimal time and evaluate factors related to successful IVCF retrieval. An institutional prospectively maintained database was reviewed for all IVCF retrieval attempts from 2006 to 2012. Patient demographics, comorbidities, indications for procedure, placement technique, IVCF type, presence of angulation, and time to retrieval were evaluated with respect to success or failure of retrieval. Statistical analyses (t-test, χ(2), correlations, and Kaplan-Meier plots) were performed comparing successful and unsuccessful retrievals. Of 121 attempted IVCF retrievals, 92 (76%) were successful and 29 (24%) were unsuccessful. There were no significant differences between the successful and unsuccessful attempts in terms of patient demographics, comorbidities, indications for procedure, placement technique, or IVCF type, which included 93 Celect (77%) and 28 Gunther Tulip (23%). Time since IVCF placement was significantly different (P = .025) between the successful and unsuccessful retrieval groups (medians were 105 [7-368] and 162 [43-379] days, respectively). Time since IVCF placement greater than 117 days correlated significantly with unsuccessful IVCF retrieval (R = 0.218; P = .017; odds ratio, 2.88; P = .02). Angulation greater than 20 degrees on anteroposterior radiograph was noted in seven of 29 (24%) unsuccessful retrievals compared with seven of 92 (8%) successful retrievals and was significant (P = .012). Cook Gunther Tulip and Celect IVCF retrieval is most likely to be successful within 3 to 4 months of placement. Unsuccessful retrieval attempts are more likely to occur when IVCF position is angulated. Copyright © 2014 Society for Vascular Surgery. Published by Elsevier Inc. All rights reserved.

  4. Retrievable Gunther Tulip inferior vena cava filter: experience in 317 patients.

    PubMed

    Given, M F; McDonald, B C; Brookfield, P; Niggemeyer, L; Kossmann, T; Varma, D K; Thomson, K R; Lyon, S M

    2008-10-01

    The aim of our study was to assess our experience with the retrievable Gunther Tulip (GT) inferior vena cava (IVC) filter, with regard to its insertion, efficacy, ease of placement and retrieval, and associated complications. Between November 2001 and October 2005, 322 GT filters were placed in 317 patients. Insertion indications included the following: pulmonary embolus (PE) prophylaxis in trauma patients (n = 232), PE prophylaxis in perioperative patients (n = 27), PE prophylaxis in moribund intensive care unit patients (n = 22), recent PE (n = 48), extensive deep venous thrombosis (n = 66), contraindication to anticoagulation (n = 63), anticoagulation complication (n = 8) and deep venous thrombosis with failed anticoagulation (n = 8). Some patients had more than one indication for caval filter placement. Two hundred and five attempted retrievals have been carried out, with 15 failures. Our successful retrieval rate is 92%. Nineteen filters were originally inserted permanently. There have been three minor complications associated with insertion and five with retrieval. The mean time from filter insertion to attempted retrieval was 76.95 days. The ideal filter implantation time gives the patient the benefit of PE protection, while avoiding the long-term risks associated with caval filters. Although GT retrieval times have lengthened considerably, our data suggest that this is at the expense of successful retrieval rates.

  5. Successful removal of a Gunther tulip vena cava filter with wall-embedded hook and migration during a retrieval attempt.

    PubMed

    Yamagami, Takuji; Yoshimatsu, Rika; Matsumoto, Tomohiro; Nishimura, Tsunehiko

    2013-01-01

    Retrieval of a Gunther tulip vena cava filter implanted in a patient with inferior vena cava and right common iliac vein thrombosis was attempted by the standard method. Because the filter was tilted, the hook became attached to the vena cava wall and could not be snared. During attempts at removal by an alternative method, the filter migrated toward the right atrium. However, it was finally successfully removed.

  6. Successful removal of a Gunther tulip vena cava filter with wall-embedded hook and migration during a retrieval attempt

    PubMed Central

    Yamagami, Takuji; Yoshimatsu, Rika; Matsumoto, Tomohiro; Nishimura, Tsunehiko

    2013-01-01

    Retrieval of a Gunther tulip vena cava filter implanted in a patient with inferior vena cava and right common iliac vein thrombosis was attempted by the standard method. Because the filter was tilted, the hook became attached to the vena cava wall and could not be snared. During attempts at removal by an alternative method, the filter migrated toward the right atrium. However, it was finally successfully removed. PMID:23986855

  7. Safety and Efficacy of the Gunther Tulip Retrievable Vena Cava Filter: Midterm Outcomes

    SciTech Connect

    Hoffer, Eric K. Mueller, Rebecca J.; Luciano, Marcus R.; Lee, Nicole N.; Michaels, Anne T.; Gemery, John M.

    2013-08-01

    PurposeTo evaluate of the medium-term integrity, efficacy, and complication rate associated with the Gunther Tulip vena cava filter.MethodsA retrospective study was performed of 369 consecutive patients who had infrarenal Gunther Tulip inferior vena cava filters placed over a 5-year period. The mean patient age was 61.8 years, and 59 % were men. Venous thromboembolic disease and a contraindication to or complication of anticoagulation were the indications for filter placement in 86 % of patients; 14 % were placed for prophylaxis in patients with a mean of 2.3 risk factors. Follow-up was obtained by review of medical and radiologic records.ResultsMean clinical follow-up was 780 days. New or recurrent pulmonary embolus occurred in 12 patients (3.3 %). New or recurrent deep-vein thrombosis occurred in 53 patients (14.4 %). There were no symptomatic fractures, migrations, or caval perforations. Imaging follow-up in 287 patients (77.8 %) at a mean of 731 days revealed a single (0.3 %) asymptomatic fracture, migration greater than 2 cm in 36 patients (12.5 %), and no case of embolization. Of 122 patients with CT scans, asymptomatic perforations were identified in 53 patients (43.4 %) at a mean 757 days.ConclusionThe Gunther Tulip filter was safe and effective at 2-year follow-up. Complication rates were similar to those reported for permanent inferior vena cava filters.

  8. Safety and efficacy of the Gunther Tulip retrievable vena cava filter: midterm outcomes.

    PubMed

    Hoffer, Eric K; Mueller, Rebecca J; Luciano, Marcus R; Lee, Nicole N; Michaels, Anne T; Gemery, John M

    2013-08-01

    To evaluate of the medium-term integrity, efficacy, and complication rate associated with the Gunther Tulip vena cava filter. A retrospective study was performed of 369 consecutive patients who had infrarenal Gunther Tulip inferior vena cava filters placed over a 5-year period. The mean patient age was 61.8 years, and 59% were men. Venous thromboembolic disease and a contraindication to or complication of anticoagulation were the indications for filter placement in 86% of patients; 14% were placed for prophylaxis in patients with a mean of 2.3 risk factors. Follow-up was obtained by review of medical and radiologic records. Mean clinical follow-up was 780 days. New or recurrent pulmonary embolus occurred in 12 patients (3.3%). New or recurrent deep-vein thrombosis occurred in 53 patients (14.4%). There were no symptomatic fractures, migrations, or caval perforations. Imaging follow-up in 287 patients (77.8%) at a mean of 731 days revealed a single (0.3%) asymptomatic fracture, migration greater than 2 cm in 36 patients (12.5%), and no case of embolization. Of 122 patients with CT scans, asymptomatic perforations were identified in 53 patients (43.4%) at a mean 757 days. The Gunther Tulip filter was safe and effective at 2-year follow-up. Complication rates were similar to those reported for permanent inferior vena cava filters.

  9. Retrieval of gunther tulip vena cava filter with thrombosed hook and a leg incorporated into the vena cava wall.

    PubMed

    Yamagami, Takuji; Yoshimatsu, Rika; Matsumoto, Tomohiro; Nishimura, Tsunehiko

    2009-01-01

    A Gunther tulip vena cava filter was implanted in a patient with pulmonary embolism from deep venous thrombosis. The filter became unnecessary after therapy. However, retrieval by the standard method employing a vascular sheath placed via the transjugular approach in combination with a snare device was impossible. A thrombus occupying the apical hook made it difficult to snare the hook, also one filter leg was incorporated into the inferior vena cava wall. Therefore we modified an existing method to withdraw the filter. As the first step, the filter cone was snared using the snare-over-guide wire loop technique, and the cephalad site of the filter was introduced into the sheath. Then, a 12-French sheath was advanced from the femoral vein and, using a pusher, the distal legs of the filter were pushed, which resulted the filter leg that was incorporated into the inferior vena cava wall became detached. Finally the filter was successfully retrieved.

  10. Retrieval of Gunther Tulip Vena Cava Filter with Thrombosed Hook and a Leg Incorporated into the Vena Cava Wall

    PubMed Central

    Yamagami, Takuji; Yoshimatsu, Rika; Matsumoto, Tomohiro; Nishimura, Tsunehiko

    2009-01-01

    A Gunther tulip vena cava filter was implanted in a patient with pulmonary embolism from deep venous thrombosis. The filter became unnecessary after therapy. However, retrieval by the standard method employing a vascular sheath placed via the transjugular approach in combination with a snare device was impossible. A thrombus occupying the apical hook made it difficult to snare the hook, also one filter leg was incorporated into the inferior vena cava wall. Therefore we modified an existing method to withdraw the filter. As the first step, the filter cone was snared using the snare-over-guide wire loop technique, and the cephalad site of the filter was introduced into the sheath. Then, a 12-French sheath was advanced from the femoral vein and, using a pusher, the distal legs of the filter were pushed, which resulted the filter leg that was incorporated into the inferior vena cava wall became detached. Finally the filter was successfully retrieved. PMID:23555355

  11. Endovascular repair of a perforation of the vena caval wall caused by the retrieval of a Gunther Tulip filter after long-term implantation.

    PubMed

    Morishita, Hiroyuki; Yamagami, Takuji; Matsumoto, Tomohiro; Takeuchi, Yoshito; Sato, Osamu; Nishimura, Tsunehiko

    2011-02-01

    Symptomatic penetration of the inferior vena cava (IVC) wall reportedly occurs in 0.3% of patients in whom a filter has been implanted, and it causes injury to the adjacent structures (Bogue et al. in Pediatr Radiol 39(10):1110-1113, 1; Brzezinski et al. in Burns 32(5):640-643, 2). We succeeded in the endovascular repair of perforation of the IVC wall occurring during the retrieval of a penetrated Gunther tulip vena cava filter (Cook, Bjaeverskov, Denmark) after long-term implantation.

  12. Endovascular Repair of a Perforation of the Vena Caval Wall Caused by the Retrieval of a Gunther Tulip Filter After Long-Term Implantation

    SciTech Connect

    Morishita, Hiroyuki; Yamagami, Takuji; Matsumoto, Tomohiro; Takeuchi, Yoshito; Sato, Osamu; Nishimura, Tsunehiko

    2011-02-15

    Symptomatic penetration of the inferior vena cava (IVC) wall reportedly occurs in 0.3% of patients in whom a filter has been implanted, and it causes injury to the adjacent structures (Bogue et al. in Pediatr Radiol 39(10):1110-1113, 1; Brzezinski et al. in Burns 32(5):640-643, 2). We succeeded in the endovascular repair of perforation of the IVC wall occurring during the retrieval of a penetrated Gunther tulip vena cava filter (Cook, Bjaeverskov, Denmark) after long-term implantation.

  13. Lumbar artery pseudoaneurysm caused by a Gunther Tulip inferior vena cava filter.

    PubMed

    Skeik, Nedaa; McEachen, James C; Stockland, Andrew H; Wennberg, Paul W; Shepherd, Roger F J; Shields, Raymond C; Andrews, James C

    2011-11-01

    Inferior vena cava (IVC) filters are widely used to decrease the risk of pulmonary embolism in patients with contraindications to anticoagulation. Complications include local hematoma, access site deep venous thrombosis (DVT), filter migration and embolization, leg penetration through the IVC wall, IVC occlusion, and filter fracture with embolization. Other rare complications include leg penetration into adjacent organs including duodenum and ureter. Lumbar artery pseudoaneurysms are rare and may be spontaneous, iatrogenic, or traumatic. To date, there have been 3 case reports of lumbar artery pseudoaneurysms caused by IVC filters. We present an additional case of a lumbar artery pseudoaneurysm caused by a Gunther Tulip IVC filter treated successfully with selective embolization.

  14. Gunther Tulip Inferior Vena Cava Filter Placement During Treatment for Deep Venous Thrombosis of the Lower Extremity

    SciTech Connect

    Yamagami, Takuji Kato, Takeharu; Iida, Shigeharu; Hirota, Tatsuya; Nishimura, Tsunehiko

    2005-05-15

    Purpose. To evaluate the efficacy and safety of Gunther tulip retrievable vena cava filter (GTF) implantation to prevent pulmonary embolism during intravenously administered thrombolytic and anticoagulation therapy and interventional radiological therapy for occlusive or nonocclusive deep venous thrombosis (DVT) of the lower extremity. Methods. We evaluated placement of 55 GTFs in 42 patients with lower extremity DVT who had undergone various treatments including those utilizing techniques of interventional radiology. Results. Worsening of pulmonary embolism in patients with existing pulmonary embolism or in those without pulmonary embolism at the time of GTF insertion was avoided in all patients. All attempts at implantation of the GTF were safely accomplished. Perforation and migration experienced by one patient was the only complication. Mean period of treatment for DVT under protection from pulmonary embolism by the GTF was 12.7 {+-} 8.3 days (mean {+-} SD, range 4-37 days). We attempted retrieval of GTFs in 18 patients in whom the venous thrombus had disappeared after therapy, and retrieval in one of these 18 cases failed. GTFs were left in the vena cava in 24 patients for permanent use when the DVT was refractory to treatment. Conclusion. The ability of the GTF to protect against pulmonary embolism during treatment of DVT was demonstrated. Safety in both placement and retrieval was clarified. Because replacement with a permanent filter was not required, use of the GTF was convenient when further protection from complicated pulmonary embolism was necessary.

  15. Guenter Tulip Filter Retrieval Experience: Predictors of Successful Retrieval

    SciTech Connect

    Turba, Ulku Cenk Arslan, Bulent Meuse, Michael Sabri, Saher; Macik, Barbara Gail

    2010-08-15

    We report our experience with Guenter Tulip filter placement indications, retrievals, and procedural problems, with emphasis on alternative retrieval techniques. We have identified 92 consecutive patients in whom a Guenter Tulip filter was placed and filter removal attempted. We recorded patient demographic information, filter placement and retrieval indications, procedures, standard and nonstandard filter retrieval techniques, complications, and clinical outcomes. The mean time to retrieval for those who experienced filter strut penetration was statistically significant [F(1,90) = 8.55, p = 0.004]. Filter strut(s) IVC penetration and successful retrieval were found to be statistically significant (p = 0.043). The filter hook-IVC relationship correlated with successful retrieval. A modified guidewire loop technique was applied in 8 of 10 cases where the hook appeared to penetrate the IVC wall and could not be engaged with a loop snare catheter, providing additional technical success in 6 of 8 (75%). Therefore, the total filter retrieval success increased from 88 to 95%. In conclusion, the Guenter Tulip filter has high successful retrieval rates with low rates of complication. Additional maneuvers such as a guidewire loop method can be used to improve retrieval success rates when the filter hook is endothelialized.

  16. Introducer curving technique to reduce tilting of transfemoral Gunther Tulip IVC filter: in vitro study.

    PubMed

    Xiao, Liang; Wang, Man; Huang, De-Sheng; Shen, Jing; Tong, Jia-Jie

    2012-09-01

    Severe tilting of Günther Tulip filter (GTF) may be associated with difficulty in retrieval. To determine if an introducer curving technique of GTF can decrease the tilting degree of GTF in a caval model. The model was constructed by placing Dacron grafts in bifurcated glass tubes. The study included three groups: Right Straight Group (G(1)), Left Straight Group (G(2)), and Left Curved Group (G(3)). In G(3), a 10-20° angle was curved on the metal introducer before insertion to decrease the angle between inferior vena cava axes and metal introducer (A(CM)). Before GTF was released, the distance between the caval right wall and the apical hook (D(CH1)), and A(CM) were measured. The tilt angle of GTF (A(CF)) was also measured. In G(1), GTF apex tended to center compared to G(2) (59% vs. 36%, P < 0.01). In G(3), GTF apex tended to center compared to G(2) (71% vs. 36%, P < 0.01). The differences of A(CF) between G(1) and G(2) (2.66 ± 1.80 vs. 4.13 ± 2.07, P < 0.01) and between G(2) and G(3) (4.13 ± 2.07 vs. 2.39 ± 1.79, P < 0.01) were statistically significant. There were significant positive correlations between A(CM) and A(CF), whereas significant negative correlations were detected between D(CH1) and A(CF) in each group. The oblique course of GTF delivery system relative to the axis of the cava causes filter tilt, and thus, curving the introducer prior to its introduction helps to reduce the filter tilt. We recommend a clinical study to determine whether the introducer curving technique improves filter centering and its retrievability.

  17. Günter tulip filter retrieval experience: predictors of successful retrieval.

    PubMed

    Turba, Ulku Cenk; Arslan, Bulent; Meuse, Michael; Sabri, Saher; Macik, Barbara Gail; Hagspiel, Klaus D; Matsumoto, Alan H; Angle, John F

    2010-08-01

    We report our experience with Günter Tulip filter placement indications, retrievals, and procedural problems, with emphasis on alternative retrieval techniques. We have identified 92 consecutive patients in whom a Günter Tulip filter was placed and filter removal attempted. We recorded patient demographic information, filter placement and retrieval indications, procedures, standard and nonstandard filter retrieval techniques, complications, and clinical outcomes. The mean time to retrieval for those who experienced filter strut penetration was statistically significant [F(1,90) = 8.55, p = 0.004]. Filter strut(s) IVC penetration and successful retrieval were found to be statistically significant (p = 0.043). The filter hook-IVC relationship correlated with successful retrieval. A modified guidewire loop technique was applied in 8 of 10 cases where the hook appeared to penetrate the IVC wall and could not be engaged with a loop snare catheter, providing additional technical success in 6 of 8 (75%). Therefore, the total filter retrieval success increased from 88 to 95%. In conclusion, the Günter Tulip filter has high successful retrieval rates with low rates of complication. Additional maneuvers such as a guidewire loop method can be used to improve retrieval success rates when the filter hook is endothelialized.

  18. Guenther Tulip Filter Retrieval from a Left-sided Inferior Vena Cava

    SciTech Connect

    Brountzos, Elias N.; Kaufman, John A. Lakin, Paul L.

    2004-01-15

    Optional (retrievable) inferior cava filters (IVC) may have advantages over permanent filters in a certain subset of patients, especially in view of recent concerns about the long-term thrombotic complications of the latter. Retrieval of the Guenther Tulip Filter (GTF), an optional filter, has been reported in a total of 76 patients. We present the first description of GTF retrieval from a left-sided IVC using the right internal jugular approach.

  19. Factors associated with failed retrieval of the Günther Tulip inferior vena cava filter.

    PubMed

    Marquess, Joel S; Burke, Charles T; Beecham, Ashley H; Dixon, Robert G; Stavas, Joseph M; Sag, Alan A; Koch, Gary G; Mauro, Matthew A

    2008-09-01

    To identify potential factors associated with failed retrieval of the Günther Tulip inferior vena cava (IVC) filter. A retrospective review was performed of patients who underwent placement of the Günther Tulip filter with at least one attempt at filter retrieval over a 3-year period. Patient demographics, filter dwell time, filter angulation, and filter leg protrusion were analyzed. A total of 188 patients were included in the study. Primary retrieval success was achieved in 166 patients (88.3%), for an overall retrieval success rate of 94.2%. The overall mean dwell time was 63 days, whereas the mean dwell time in cases of retrieval failure was 95.4 days. A total of seven filters were in place for longer than 6 months, four of which were successfully retrieved. The degree of filter tilt was not found to be significantly related to retrieval success (P = .36), even though filter angulation was commonly cited as a reason for retrieval failure. On venography, 90.9% of filters that could not be retrieved showed leg protrusion beyond the lumen of the IVC. Finally, increasing patient age also correlated with retrieval failure (P = .01). Prolonged dwell time and increasing patient age are associated with failed filter retrieval. However, even filters in place for extended periods can be safely removed.

  20. Dialysis grafts arterial plug: Retrieval using the tulip sheath device in vitro

    SciTech Connect

    Sharafuddin, Melhem J.; Titus, Jack L.

    1997-03-15

    The 'arterial plug' is a resistant thrombus that frequently persists at the arterial anastomosis of clotted hemodialysis grafts following thrombolytic therapy. We studied the physical and morphological characteristics of the plug and determined the feasibility of transcatheter removal in vitro using the tulip compression thrombectomy system. Sixteen thrombus plugs were recovered during surgical thrombectomy of clotted human dialysis grafts. The physical and gross physical characteristics of all plugs were analyzed. Eight specimens were evaluated microscopically. Transcatheter compression thrombectomy of eight plugs was attempted in vitro. Each plug was embedded in a polyvinyl tube filled with newly clotted blood and connected to a flow circuit. First, balloon-assisted aspiration thrombectomy (BAT) of soft thrombus was performed, while sparing the distal-most segment containing the plug. The tulip sheath was then introduced facing the 'arterial end' of the tube. The thrombus segment containing the plug was pulled back into the tulip mesh using either a 3 Fr Fogarty balloon catheter or a self-expanding rake. The tulip was closed to compress and remove the trapped plug. Near-complete thrombectomy of soft clot was achieved in all tested tubes. Compression and retrieval of the entire arterial plug was successful in all except one, where only partial compression of the plug occurred, presumably due to fibrotic changes. No fragmentation or embolization occurred in the remaining procedures. Spongy consistency was noted in 94% of the specimens. Microscopic evaluation showed organized layered thrombus with compaction in five plugs. Transcatheter removal of a thrombus plug is feasible in vitro using the tulip compression-thrombectomy system.

  1. Long-term retrieval success rate profile for the Günther Tulip vena cava filter.

    PubMed

    Smouse, H Bob; Rosenthal, David; Thuong, Van Ha; Knox, Michael F; Dixon, Robert G; Voorhees, William D; McCann-Brown, Jennifer A

    2009-07-01

    To evaluate the likelihood of successful retrieval of the Günther Tulip vena cava filter after various implant durations (up to 494 days). Retrievable Günther Tulip filters were placed in 554 patients. All patients satisfied requirements for filter placement; the primary indication for placement was specified for 394 patients (71%), as follows: unspecified trauma (n = 164), bariatric procedures (n = 128), orthopedic procedures (n = 36), and other (n = 66). Filter tilt and vena cava injury were assessed at implantation. Filters were not repositioned after placement. At retrieval, filter orientation, vena cava injury, other device-related incidents, and the degree of difficulty associated with retrieval were reported. Filter retrieval was attempted in 275 patients and successful in 248 (90.2%). The mean filter indwell time was 58.9 days (range, 3-494 days). Unsuccessful retrievals (n = 27) were attributed primarily to improper hook orientation (n = 10) or excessive tissue in-growth at the filter legs (n = 16). Of the remaining 279 patients, 223 withdrew from the study, 41 were associated with a decision to keep the filter as a permanent device, 13 died for reasons unrelated to the study, and two had no reported endpoint data. A Kaplan-Meier product-limit survival estimate revealed that the probability of successful device retrieval remained greater than 94% at 12 weeks and greater than 67% at 26 weeks. This study contributes to the body of clinical data related to retrievable filters, demonstrating reliable retrieval rates at 12 weeks, with successful retrievals up to 17 months after implantation.

  2. Long-term retrieval of modified Günther Tulip vena cava Filters: an animal study.

    PubMed

    Buecker, Arno; Behrendt, Florian F; Knüchel, Ruth; Kinzel, Sylvia; Mølgaard-Nielsen, Arne; Neuerburg, Joerg; Günther, Rolf W

    2007-10-01

    We modified the Günther Tulip Filter to allow long-term retrieval and tested this modified filter design in an animal experiment. Fourteen modified Günther Tulip Filters (Celect filter) were inserted percutaneously into the inferior venae cavae of 7 domestic adult sheep (2 filters per animal). Before removal, 3 months after filter placement, cavography was performed and the filters were removed. Subsequently, cavography was obtained to check for any signs of bleeding. All venae cavae were prepared, removed, and macroscopically examined for bleeding. Filter placement was easy and successfully performed in all cases. No thrombi were detected inside the filters. All cases showed some narrowing of the vena cava at the level, where the filter legs were connected with the vessel wall. Neither cavograms after filter removal nor macroscopic examinations of the perivascular vena cava tissue showed any significant bleeding. The modified Günther Tulip Filter allowed for successful and uncomplicated filter removal up to 3 months after placement.

  3. The Günther-Tulip retrievable filter: a method for assessing tilting of the filter.

    PubMed

    Semiz-Oysu, Aslihan; Cho, Kyung J

    2010-04-01

    Tilting of the Günther-Tulip filter may be responsible for failure or difficulty to retrieve. Assessment of the filter tilt can be difficult when only AP imaging is available. This study is performed in vitro to develop a simple method to assess the Günther-Tulip filter for tilting. A model consisting of a plastic tube was used to simulate vena cava. A Günther-Tulip filter was placed centred or tilted within the tube at various positions and radiograms were taken in AP, lateral, and craniocaudally angled projections. The images were analysed to determine the actual degree of tilt, the distance between the limb hooks on AP radiograms and the craniocaudal angulation degree needed to align the limb hooks linearly. When the filter was centred or tilted laterally, all limb hooks of the filter were aligned linearly on AP radiograms. When the filter was tilted in AP or oblique direction, linear alignment of the limb hooks was lost and the ventral and dorsal limb hooks showed separation on AP projection. The amount of separation and the craniocaudal angles to align the filter hooks corresponded to actual tilt angles. Loss of linear alignment of limb hooks in AP radiograms may suggest the presence of tilt in the AP plane. Significant separation of limb hooks should be alarming for significant filter tilt, and further evaluation of the filter position by CT scan or lateral cavogram should be obtained prior to planning of the retrieval. Copyright 2009 Australasian Society of Cardiac and Thoracic Surgeons and the Cardiac Society of Australia and New Zealand. Published by Elsevier B.V. All rights reserved.

  4. Results of a multicenter study of the retrievable Tulip vena cava filter: Early clinical experience

    SciTech Connect

    Neuerburg, Joerg M.; Guenther, Rolf W.; Vorwerk, Dierk; Dondelinger, Robert F.; Jaeger, Horst; Lackner, Klaus J.; Schild, Hans H.; Plant, Graham R.; Joffre, Francis G.; Schneider, Pierre A.; Janssen, Johan H. A.

    1997-01-15

    Purpose. To evaluate clinically a new, retrievable vena caval filter in a multicenter study. Methods. The Tulip filter is a stainless steel half-basket that is suitable for antegrade or retrograde insertion via an 8.5 Fr introducer sheath. The filter can be retrieved via the jugular approach using an 11 Fr coaxial retrieval system. Forty-eight filters were implanted via the femoral approach and 38 via the jugular approach in 83 patients. Follow-up examinations (plain films, colorcoded duplex sonography) were performed up to 3 years after filter insertion (mean 136 days) in 75 patients. Twenty-seven patients were screened by colorcoded duplex sonography for insertion site thrombosis. Results. An appropriate filter position was achieved in all cases. Insertion problems occurred in 3 cases; these were not due to the filter design but to an imperfect prototype insertion mechanism that has now been modified (n=2) or a manipulation error (n=1). In 2 of these cases the filters were replaced percutaneously; 1 patient required venotomy for filter removal. No further complications due to filter insertion occurred. Two filters were used as temporary devices and were successfully removed after 6 and 11 days, respectively. There was 1 fatal recurrent pulmonary embolism (PE) and 2 non-fatal PE, 5 complete and 3 partial caval occlusions, and 3 caudal migrations of the filter. Insertion site venous thrombosis was not seen in the 27 patients monitored for this complication. Conclusion. Precise placement of the Tulip filter is feasible by either access route and the device appears mechanically stable. Further observations are needed to confirm that safe filter removal is practical up to 10 days after its insertion.

  5. Placement of a Retrievable Guenther Tulip Filter in the Superior Vena Cava for Upper Extremity Deep Venous Thrombosis

    SciTech Connect

    Nadkarni, Sanjay; Macdonald, Sumaira; Cleveland, Trevor J.; Gaines, Peter A.

    2002-12-15

    A retrievable Guenther Tulip caval filter(William Cook, Europe) was successfully placed and retrieved in the superior vena cava for upper extremity deep venous thrombosis in a 56-year-old woman. Bilateral subclavian and internal jugular venous thromboses thought secondary to placement of multiple central venous catheters were present. There have been reports of the use of permanent Greenfield filters and a single case report of a temporary filter in the superior vena cava. As far as we are aware this is the first reported placement and successful retrieval of a filter in these circumstances.

  6. Perforation of the IVC: Rule Rather Than Exception After Longer Indwelling Times for the Guenther Tulip and Celect Retrievable Filters

    SciTech Connect

    Durack, Jeremy C. Westphalen, Antonio C.; Kekulawela, Stephanie; Bhanu, Shiv B.; Avrin, David E.; Gordon, Roy L.; Kerlan, Robert K.

    2012-04-15

    Purpose: This study was designed to assess the incidence, magnitude, and impact upon retrievability of vena caval perforation by Guenther Tulip and Celect conical inferior vena cava (IVC) filters on computed tomographic (CT) imaging. Methods: Guenther Tulip and Celect IVC filters placed between July 2007 and May 2009 were identified from medical records. Of 272 IVC filters placed, 50 (23 Guenther Tulip, 46%; 27 Celect, 54%) were retrospectively assessed on follow-up abdominal CT scans performed for reasons unrelated to the filter. Computed tomography scans were examined for evidence of filter perforation through the vena caval wall, tilt, or pericaval tissue injury. Procedure records were reviewed to determine whether IVC filter retrieval was attempted and successful. Results: Perforation of at least one filter component through the IVC was observed in 43 of 50 (86%) filters on CT scans obtained between 1 and 880 days after filter placement. All filters imaged after 71 days showed some degree of vena caval perforation, often as a progressive process. Filter tilt was seen in 20 of 50 (40%) filters, and all tilted filters also demonstrated vena caval perforation. Transjugular removal was attempted in 12 of 50 (24%) filters and was successful in 11 of 12 (92%). Conclusions: Longer indwelling times usually result in vena caval perforation by retrievable Guenther Tulip and Celect IVC filters. Although infrequently reported in the literature, clinical sequelae from IVC filter components breaching the vena cava can be significant. We advocate filter retrieval as early as clinically indicated and increased attention to the appearance of IVC filters on all follow-up imaging studies.

  7. Use of rigid bronchoscopic forceps in the difficult retrieval of the Günther Tulip inferior vena cava filter.

    PubMed

    Burke, Charles T; Dixon, Robert G; Stavas, Joseph M

    2007-10-01

    Retrievable inferior vena cava (IVC) filters may, over time, become incorporated into the wall of the IVC, making subsequent removal difficult. The authors present a case in which a Günther Tulip filter was placed prophylactically before gastric bypass surgery. The retrieval hook of the filter became incorporated into the wall of the IVC, preventing the filter from being snared. Eventually, the filter was freed from the wall of the IVC and successfully removed by using rigid bronchoscopy forceps; however, the filter was damaged in the process.

  8. The Günther-Tulip retrievable IVC filter: clinical experience in 118 consecutive patients.

    PubMed

    Ota, Satoshi; Yamada, Norikazu; Tsuji, Akihiro; Ishikura, Ken; Nakamura, Mashio; Isaka, Naoki; Ito, Masaaki

    2008-02-01

    The purpose of this study was to assess the use of the Günther Tulip Filter (GTF) for the management of venous thromboembolism (VTE). Between December 2000 and April 2005, 118 patients (42 males, 76 females; mean age 60.5 years) diagnosed with VTE, underwent treatment with a GTF. The filter was left permanently in 52 patients. In the other 66 patients, attempts were made to retrieve it, with success in 60 cases (90.9%). No major complication was found throughout the filter's use. Of the 58 patients with the permanent filters, 41 underwent enhanced computed tomography at follow-up in the chronic phase. Thirty-eight filters (92.7%) remained patent, and under low-intensity anticoagulation therapy (international normalized ratio 1.8+/-0.4), the patency rate was 97.1%. Penetration of the inferior vena cava (IVC) wall by the filter's struts beyond a distance of 3 mm occurred in 23 patients (56.1%), but there was no observable leakage from the IVC or injury to adjacent organs. The GTF is feasible and safe for treating VTE. When used permanently, GTFs have a high patency rate, and there is neither leakage from the IVC nor injury to adjacent organs in the event of penetration by the struts.

  9. Excimer laser-assisted retrieval of Günther Tulip vena cava filters: a pilot study in a canine Model.

    PubMed

    Saito, Naritatsu; Shimamoto, Takeshi; Takeda, Takahide; Marui, Akira; Kimura, Takeshi; Ikeda, Tadashi; Sakata, Ryuzo

    2010-05-01

    Although most Günther Tulip filters (GTFs) can be safely retrieved within a few months after implantation, their recommended safe retrieval period is within a few weeks. This study aims to assess the feasibility of excimer laser-assisted retrieval of GTFs incorporated into the inferior vena cava (IVC) wall in a canine model. Six GTFs were implanted in six mongrel dogs and retrieved after four weeks. The retrieval system consisted of a 14-F excimer laser sheath, an 8-F guide catheter, and a 15-mm Goose Neck snare. All filters were tightly fixed to the IVC wall. After ablation of the adhesions by excimer laser emission, all filters were successfully retrieved. Final cavography after retrieval revealed no caval damage except for minor extravasation in three dogs. Examination of the caval specimen taken from a dog immediately after filter retrieval revealed partial absence of the intima and media. In the remaining five dogs, cavography performed 2 days after filter retrieval revealed complete hemostasis and almost indistinguishable intimal indentations. On follow-up cavography 28 days after filter retrieval, caval stenosis with 38% +/- 11% diameter narrowing was noted. The caval specimen obtained from a dog at 28 days showed neointima formation at the level where the filter struts were in contact with the caval wall. The other four dogs have survived for more than 3 months without any adverse events. Laser-assisted retrieval of a GTF incorporated into the IVC wall is feasible in dogs.

  10. The use of paired optionally retrievable günther tulip filters in trauma patients with anatomical variants.

    PubMed

    Vo, Nghia-Jack; Wieseler, Karen W; Burdick, Thomas R; Goswami, Gaurav K; Vaidya, Sandeep S; Andrews, R Torrance

    2007-03-01

    Inferior vena cava (IVC) filtration is commonly performed to protect against pulmonary embolism in acutely injured patients with contraindications for anticoagulation therapy. Increasingly, optionally retrievable IVC filters are utilized, particularly in younger patients with longer life expectancies. There are well-described anatomical variants that preclude the typical infrarenal deployment of IVC filters. We describe three cases in which trauma patients with congenital anomalies required temporary prophylaxis with IVC filters. One patient had a duplication of the IVC requiring filter deployment in each IVC limb. The second patient had a low inserting accessory left renal vein, and a third patient had a megacava. Both of these patients required filter deployment in each common iliac vein. In each case, a pair of optionally retrievable Günther Tulip filters was deployed and subsequently retrieved.

  11. Retrievable Günther Tulip Vena Cava Filter in the prevention of pulmonary embolism in patients with acute deep venous thrombosis in perinatal period.

    PubMed

    Köcher, Martin; Krcova, Vera; Cerna, Marie; Prochazka, Martin

    2009-04-01

    To evaluate the feasibility and efficacy of the retrievable Günther Tulip Vena Cava Filter in the prevention of pulmonary embolism in patients with acute deep vein thrombosis in the perinatal period and to discuss the technical demands associated with the filter's implantation and retrieval. Between 1996 until 2007, eight women (mean age 27.4 years, range 20-42 years) with acute deep iliofemoral venous thrombosis in the perinatal period of pregnancy and increased risk of pulmonary embolism during delivery were indicated for retrievable Günther Tulip Vena Cava Filter implantation. All filters were inserted and removed under local anesthesia from the jugular approach. The Günther Tulip Vena Cava Filter was implanted suprarenally in all patients on the day of caesarean delivery. In follow-up cavograms performed just before planned filter removal, no embolus was seen in the filter in any patient. In all patients the filter was retrieved without complications on the 12th day after implantation. Retrievable Günther Tulip Vena Cava Filters can be inserted and removed in patients during the perinatal period without major complications.

  12. Surgical removal of a Günther Tulip filter with symptomatic caval penetration after unsuccessful percutaneous retrieval.

    PubMed

    Hwang, Jeong Kye; Kim, Ji Il; Kim, Sang Dong; Cho, Kyung J; Moon, In Sung

    2011-07-01

    We report a case involving the surgical removal of a Günther Tulip filter with symptomatic caval penetration after an unsuccessful attempt at percutaneous retrieval in a 32-year-old man with recurrent deep vein thrombosis. He presented with acute right flank pain a day after the attempted retrieval of the filter. An abdominal radiograph before surgical removal of the filter showed tilting and splaying of the filter, which was suggestive of caval penetration. Contrast-enhanced computerized tomography confirmed caval penetration of the filter legs into the retroperitoneal space, right renal vein, and duodenum associated with a small retroperitoneal fluid collection. Surgical removal of the filter by a transperitoneal approach resulted in resolution of the flank pain. Copyright © 2011. Published by Elsevier Inc.

  13. Easy retrieval of polyaxial tulip-head pedicle screws by “U” rod technique

    PubMed Central

    Isik, Cengiz; Altinel, Levent; Ates, Ali; Ozdemir, Mustafa

    2009-01-01

    The number of fusion surgeries increase each year which also increase the need for implant removal. In some cases, it can be extremely hard to remove a pedicle screw especially when there is a mismatch of the screw and the screwdriver. Also the screwdrivers can be contaminated during the operation, and this will cause a delay till the instruments are re-sterilized. There is a need for the removal of screws without special instruments. We describe a method for removing tulip-head polyaxial pedicle screws without special instruments. The screws are removed using an Allen key, a rod bender and a “U” shaped rod. We successfully removed 76 screws in 11 recent cases without any complications. The “U” rod technique is a simple and useful technique for the removal of tulip-head polyaxial screws. PMID:19618219

  14. Easy retrieval of polyaxial tulip-head pedicle screws by "U" rod technique.

    PubMed

    Kose, Kamil Cagri; Isik, Cengiz; Altinel, Levent; Ates, Ali; Ozdemir, Mustafa

    2010-01-01

    The number of fusion surgeries increase each year which also increase the need for implant removal. In some cases, it can be extremely hard to remove a pedicle screw especially when there is a mismatch of the screw and the screwdriver. Also the screwdrivers can be contaminated during the operation, and this will cause a delay till the instruments are re-sterilized. There is a need for the removal of screws without special instruments. We describe a method for removing tulip-head polyaxial pedicle screws without special instruments. The screws are removed using an Allen key, a rod bender and a "U" shaped rod. We successfully removed 76 screws in 11 recent cases without any complications. The "U" rod technique is a simple and useful technique for the removal of tulip-head polyaxial screws.

  15. Günther Tulip inferior vena cava filter retrieval using a bidirectional loop-snare technique.

    PubMed

    Ross, Jordan; Allison, Stephen; Vaidya, Sandeep; Monroe, Eric

    2016-01-01

    Many advanced techniques have been reported in the literature for difficult Günther Tulip filter removal. This report describes a bidirectional loop-snare technique in the setting of a fibrin scar formation around the filter leg anchors. The bidirectional loop-snare technique allows for maximal axial tension and alignment for stripping fibrin scar from the filter legs, a commonly encountered complication of prolonged dwell times.

  16. Techniques used for difficult retrievals of the Günther Tulip inferior vena cava filter: experience in 32 patients.

    PubMed

    Van Ha, Thuong G; Vinokur, Olga; Lorenz, Jonathan; Regalado, Sidney; Zangan, Steven; Piano, Giancarlo; Funaki, Brian

    2009-01-01

    To retrospectively review experience with difficult retrievals of Günther Tulip filters (GTFs) in which various techniques were used. From December 2004 to December 2006, 32 patients were referred to a single radiology department for GTF retrieval (25 women and seven men; mean age, 40 years; range, 21-60 y). All patients were evaluated, and 22 of these patients had undergone unsuccessful filter retrieval attempts elsewhere. In the remaining patients, significant tilt of the filter (n = 8) or difficult internal jugular vein access (n = 2) discouraged retrieval attempts. There were a total of 38 filters. Twenty-five patients had a filter in the infrarenal inferior vena cava (IVC). Among the remaining seven patients, six had bilateral iliac filters and one had a left iliac filter. Retrievals were performed via conventional technique-ie, by snaring the hook of the filter without additional maneuvers-or other techniques. Thirty-seven of 38 filters were successfully removed, for a success rate of 97%. Successful retrievals were performed with conventional (n = 4), catheter twist (n = 3), modified snare (n = 15), loop snare (n = 14), and balloon dilation (n = 1) techniques. The average dwell time for filters successfully removed was 58 days (range, 22-258 d). One failure occurred in a patient who had undergone unsuccessful retrieval previously. The hook of the filter and a displaced secondary strut, which had migrated superiorly, were incorporated into the IVC wall in this case. Additional maneuvers were useful in these difficult retrievals of GTFs that might not otherwise be retrievable with the conventional method.

  17. Perforation of the IVC: rule rather than exception after longer indwelling times for the Günther Tulip and Celect retrievable filters.

    PubMed

    Durack, Jeremy C; Westphalen, Antonio C; Kekulawela, Stephanie; Bhanu, Shiv B; Avrin, David E; Gordon, Roy L; Kerlan, Robert K

    2012-04-01

    This study was designed to assess the incidence, magnitude, and impact upon retrievability of vena caval perforation by Günther Tulip and Celect conical inferior vena cava (IVC) filters on computed tomographic (CT) imaging. Günther Tulip and Celect IVC filters placed between July 2007 and May 2009 were identified from medical records. Of 272 IVC filters placed, 50 (23 Günther Tulip, 46%; 27 Celect, 54%) were retrospectively assessed on follow-up abdominal CT scans performed for reasons unrelated to the filter. Computed tomography scans were examined for evidence of filter perforation through the vena caval wall, tilt, or pericaval tissue injury. Procedure records were reviewed to determine whether IVC filter retrieval was attempted and successful. Perforation of at least one filter component through the IVC was observed in 43 of 50 (86%) filters on CT scans obtained between 1 and 880 days after filter placement. All filters imaged after 71 days showed some degree of vena caval perforation, often as a progressive process. Filter tilt was seen in 20 of 50 (40%) filters, and all tilted filters also demonstrated vena caval perforation. Transjugular removal was attempted in 12 of 50 (24%) filters and was successful in 11 of 12 (92%). Longer indwelling times usually result in vena caval perforation by retrievable Günther Tulip and Celect IVC filters. Although infrequently reported in the literature, clinical sequelae from IVC filter components breaching the vena cava can be significant. We advocate filter retrieval as early as clinically indicated and increased attention to the appearance of IVC filters on all follow-up imaging studies.

  18. Caval penetration by retrievable inferior vena cava filters: a retrospective comparison of Option and Günther Tulip filters.

    PubMed

    Olorunsola, Olufoladare G; Kohi, Maureen P; Fidelman, Nicholas; Westphalen, Antonio C; Kolli, Pallav K; Taylor, Andrew G; Gordon, Roy L; LaBerge, Jeanne M; Kerlan, Robert K

    2013-04-01

    To compare the frequency of vena caval penetration by the struts of the Option and Günther Tulip cone filters on postplacement computed tomography (CT) imaging. All patients who had an Option or Günther Tulip inferior vena cava (IVC) filter placed between January 2010 and May 2012 were identified retrospectively from medical records. Of the 208 IVC filters placed, the positions of 58 devices (21 Option filters, 37 Günther Tulip filters [GTFs]) were documented on follow-up CT examinations obtained for reasons unrelated to filter placement. In cases when multiple CT studies were obtained after placement, each study was reviewed, for a total of 80 examinations. Images were assessed for evidence of caval wall penetration by filter components, noting the number of penetrating struts and any effect on pericaval tissues. Penetration of at least one strut was observed in 17% of all filters imaged by CT between 1 and 447 days following placement. Although there was no significant difference in the overall prevalence of penetration when comparing the Option filter and GTF (Option, 10%; GTF, 22%), only GTFs showed time-dependent penetration, with penetration becoming more likely after prolonged indwelling times. No patient had damage to pericaval tissues or documented symptoms attributed to penetration. Although the Günther Tulip and Option filters exhibit caval penetration at CT imaging, only the GTF exhibits progressive penetration over time. Copyright © 2013 SIR. Published by Elsevier Inc. All rights reserved.

  19. The CIRSE Retrievable IVC Filter Registry: Retrieval Success Rates in Practice.

    PubMed

    Lee, M J; Valenti, D; de Gregorio, M A; Minocha, J; Rimon, U; Pellerin, O

    2015-12-01

    CIRSE established a registry of retrievable filter use with the primary aim of determining the success of IVC Filter retrieval and associated complications. Secondary endpoints included filter indications, imaging strategies before retrieval, filter dwell times, and anticoagulation status. A web-based electronic registry was hosted between 01/12/2010 and 30/06/2012. Data entry occurred at the date of IVC filter retrieval and included items such as filter type, indication for filter insertion, access route, dwell time, retrieval success, complications, reasons for failed retrieval, and anticoagulation status. 671 filter retrievals were entered (male:female 333:295, mean age 55, median 57). Retrieval data were not entered in 43/671 leaving 628 patients for analysis. The 4 commonest retrievable filters used were the Celect in 182 patients, the OPTEASE in 161, ALN in 120, and Gunther Tulip in 98. Filters were inserted for absolute indications 40%, relative indications in 31%, and prophylactic in 24%, with 5% missing. Mean filter dwell time was 90 days. Filters were successfully retrieved in 576/628 patients (92%). The mean dwell time for successful retrievals was 85 days versus 145 days for unsuccessful retrievals (p = 0.001). Major complications occurred in 2 patients (0.03%). In summary, the CIRSE retrievable filter registry demonstrates a retrieval rate of 92% across a range of filter types, with a low major complication rate, reflecting current practice. There is an increase in trend of retrievable filter use for relative and prophylactic indications.

  20. Retrievable Vena Cava Filters in Major Trauma Patients: Prevalence of Thrombus Within the Filter

    SciTech Connect

    Mahrer, Arie; Zippel, Douglas; Garniek, Alexander; Golan, Gil; Bensaid, Paul; Simon, Daniel; Rimon, Uri

    2008-07-15

    The purpose of this study was to report the prevalence of thrombus within a retrievable vena cava filter inserted prophylactically in major trauma patients referred for filter extraction. Between November 2002 and August 2005, 80 retrievable inferior vena cava filters (68 Optease and 12 Gunther-Tulip) were inserted into critically injured trauma patients (mean injury severity score 33.5). The filters were inserted within 1 to 6 (mean 2) days of injury. Thirty-seven patients were referred for filter removal (32 with Optease and 5 with Gunther-Tulip). The indwelling time was 7 to 22 (mean 13) days. All patients underwent inferior vena cavography prior to filter removal. There were no insertion-related complications and all filters were successfully deployed. Forty-three (54%) of the 80 patients were not referred for filter removal, as these patients continued to have contraindications to anticoagulation. Thirty-seven patients (46%) were referred for filter removal. In eight of them (22%) a large thrombus was seen within the filters and they were left in place, all with the Optease device. The other 29 filters (36%) were removed uneventfully.We conclude that the relatively high prevalence of intrafilter thrombi with the Optease filter may be explained by either spontaneous thrombus formation or captured emboli.

  1. The TULIP Project.

    ERIC Educational Resources Information Center

    Gusack, Nancy, Ed.; And Others

    1995-01-01

    Contains 11 articles that describe different university access systems designed and built to provide access to journals via The University Licensing Program (TULIP), a science journal access project, involving Elsevier Science Publishing and major universities. The project produced insights to help with future electronic information delivery…

  2. The TULIP Project.

    ERIC Educational Resources Information Center

    Gusack, Nancy, Ed.; And Others

    1995-01-01

    Contains 11 articles that describe different university access systems designed and built to provide access to journals via The University Licensing Program (TULIP), a science journal access project, involving Elsevier Science Publishing and major universities. The project produced insights to help with future electronic information delivery…

  3. Migration of the Günther Tulip inferior vena cava filter to the chest.

    PubMed

    Galhotra, Sanjay; Amesur, Nikhil B; Zajko, Albert B; Simmons, Richard L

    2007-12-01

    The authors describe two cases in which Günther Tulip inferior vena cava filters migrated to the chest, necessitating open-heart surgery for retrieval. In the first case, a 52-year-old man was transferred to their hospital from an outside facility after the filter migrated to the main pulmonary artery during attempted filter placement. In the second case, a 72-year-old man, a Günther Tulip filter was found to have migrated to the tricuspid valve after cardiopulmonary arrest and subsequent resuscitation, including emergent central venous line placement. The authors present the relevant details of both cases, discuss possible preventive strategies, and review the available literature about migration of the Günther Tulip filter.

  4. Günther Tulip and Celect IVC filters in multiple-trauma patients.

    PubMed

    Rosenthal, David; Kochupura, Paul V; Wellons, Eric D; Burkett, Allison B; Methodius-Rayford, Walaya C

    2009-08-01

    To evaluate results with the retrievable Günther Tulip (GT) and Celect inferior vena cava filters (IVCFs) placed at the intensive care unit (ICU) bedside under "real-time" intravascular ultrasound (IVUS) guidance in multiple-trauma patients. Between December 2004 and December 2008, 187 multiple-trauma patients (109 men; mean age 44+/-2 years, range 17-71) with contraindications to low-dose anticoagulation therapy or sequential compression devices had Günther Tulip (n = 97) or Celect (n = 90) retrievable IVCFs placed under real-time IVUS guidance. Günther Tulip filters were inserted using a "double-puncture" technique. The Celect IVCFs were placed with a simplified single-puncture technique in which the filter introducer sheath was advanced until the radiopaque tip "covered" the IVUS image of the renal vein, indicating that the filter sheath was in position for filter deployment. The 2 filter groups were compared on the endpoints of technical implantation success, retrievability, prevention of PE, and procedure-related deep vein thrombosis (DVT). As verified by abdominal radiography, 93.1% (174/187) of IVCFs were placed without complications; 6 IVCFs (all GT; p = 0.03 versus Celect) were misplaced in the iliac vein but uneventfully retrieved and replaced in the IVC within 24 hours. Two insertion site femoral vein DVTs (both in the dual puncture group; p>0.2) and 5 groin hematomas occurred during follow-up. GT filters were in place a mean of 107 days and Celect 97 days. In this time, 2 pulmonary embolisms occurred (1 in each group; p>0.2). Of the 115 filters scheduled for retrieval (50 Günther Tulip, 65 Celect), 33 (23 Günther Tulip, 10 Celect) could not be retrieved (p = 0.0004). Vena cavography identified filter tilting (>20 degrees ) in 21 cases (15 GT, 6 Celect), while 12 filters (8 GT, 4 Celect) had extended indwell times (mean 187 days) and excessive tissue ingrowth covering the retrieval hook. Subjectively, the Celect filters were clinically "easier" to

  5. Analysis of tilt of the Günther Tulip filter.

    PubMed

    Sag, Alan A; Stavas, Joseph M; Burke, Charles T; Dixon, Robert G; Marquess, Joel S; Mauro, Matthew A

    2008-05-01

    To determine the frequency, dimensions, predictors, and sequelae of Günther Tulip filter (GTF) tilt measured at the time of intended retrieval. Retrospective review of all medical records and posteroanterior cavograms of 175 patients who underwent both placement and retrieval of the GTF between August 2003 and July 2007 was performed to assess the frequency, dimensions, predictors, and sequelae of tilt. Tilt occurred at the first retrieval attempt in 159 of the 175 patients (91%). The average degree of tilt was 7.1 degrees (range, 0 degrees-30 degrees), with 87 of the 159 filters with tilt (55%) having a rightward tilt. Compared with the femoral approach, filters placed with a jugular approach demonstrated 4.2 degrees (range of the standard deviation, 3.1 degrees-5.3 degrees) greater tilt at the first retrieval attempt (95% confidence interval=2.6 degrees, 5.7 degrees; P<.001, two-sided Student t test), a greater frequency of tilt of at least 14 degrees (P=.002, two-sided Fisher exact test), and greater rightward tilt predominance (P=.046, one-sided Fisher exact test). Tilt magnitude at the first retrieval attempt correlated positively with the inferior vena cava diameter 40 mm caudal to the renal vein confluence (R=.183, P=.018, Pearson correlation). Within its limitations, this study detected no new cases of pulmonary embolism, caval perforation, or GTF migration. The success rates at the first attempt at retrieval and the cumulative GTF retrieval success rates were 93% (176 of 190 filters) and 97% (181 of 190 filters), respectively. All 29 GTFs with tilt of at least 14 degrees were placed and successfully retrieved by means of a jugular approach with minimal clinical and technical sequelae. Frequent GTF tilt detected at the first retrieval attempt can reach at least 14 degrees and is associated with minimal sequelae. Insertion approach and caval diameter are significant factors in GTF tilt.

  6. The initial development of a tulip flame

    SciTech Connect

    Matalon, M.; Mcgreevy, J.L.

    1994-12-31

    The initial development of a ``tulip flame``, often observed during flame propagation in closed tubes, is attributed to a combustion instability. The roles of hydrodynamic and of the diffusional-thermal processes on the onset of instability are investigated through a linear stability analysis in which the growth or decay of small disturbances, superimposed on an otherwise smooth and planar flame front, are followed. A range of the Markstein parameter, related to the mixture composition through an appropriately defined Lewis number, has been identified where a tulip flame could be observed. For a given value of the Markstein parameter within this range, a critical wavelength is identified as the most unstable mode. This wavelength is directly related to the minimal aspect ratio of the tube where a tulip flame could be observed. The time of onset of instability is identified as the time when the most unstable disturbance, associated with the critical wavelength, grows at a faster rate than the flame front itself and exceeds a certain threshold. This occurs after the flame has propagated a certain distance down the tube: a value which has been explicitly determined in terms of the relevant parameters. Experimental records on the tulip flame phenomenon support the finding of the analysis. That is, the tulip flame forms after the flame has traveled half the tube`s length, it does not form in short tubes, and its formation depends on the mixture composition and on the initial pressure in the tube.

  7. Tulip, a Modified Munsell Color Space

    NASA Astrophysics Data System (ADS)

    Feldman, Uri

    1990-03-01

    The "Tulip" is a modified Munsell Color Space in which equal hue spacing is converted to variable hue spacing, reflecting the differential sensitivity to hue as a function of value, for a fixed chroma. Number of discernible hues, when plotted on a hue-value plane, results in the proposed tulip shape, with curved lines delineating the boundaries between hues. By means of a signal detection experiment, the tulip for yellow-green and for blue is determined. It is shown that more distinct hues of yellow-green are discernible at a high value than at low value. Conversely, for blue, more distinct hues are discernible at low value than at high value.

  8. Cytotoxic and bioactive properties of different color tulip flowers and degradation kinetic of tulip flower anthocyanins.

    PubMed

    Sagdic, Osman; Ekici, Lutfiye; Ozturk, Ismet; Tekinay, Turgay; Polat, Busra; Tastemur, Bilge; Bayram, Okan; Senturk, Berna

    2013-08-01

    This study was conducted to determine the potential use of anthocyanin-based extracts (ABEs) of wasted tulip flowers as food/drug colorants. For this aim, wasted tulip flowers were samples and analyzed for their bioactive properties and cytotoxicity. Total phenolic contents of the extracts of the claret red (126.55 mg of gallic acid equivalent (GAE)/g dry extract) and orange-red (113.76 mg GAE/g dry extract) flowers were the higher than those of the other tulip flowers. Total anthocyanin levels of the violet, orange-red, claret red and pink tulip flower extracts were determined as 265.04, 236.49, 839.08 and 404.45 mg pelargonidin 3-glucoside/kg dry extract, respectively and these levels were higher than those of the other flowers. The extracts were more effective for the inhibition of Listeria monocytogenes, Staphylococcus aureus and Yersinia enterocolitica compared to other tested bacteria. Additionally, the cytotoxic effects of five different tulip flower extracts on human breast adenocarcinoma (MCF-7) cell line were investigated. The results showed that the orange red, pink and violet extracts had no cytotoxic activity against MCF-7 cell lines while yellow and claret red extracts appeared to be toxic for the cells. Overall, the extracts of tulip flowers with different colors possess remarkable bioactive and cytotoxic properties. Copyright © 2013 Elsevier Ltd. All rights reserved.

  9. Tulip deformity with Cera atrial septal defect devices: a report of 3 cases.

    PubMed

    Kohli, Vikas

    2015-02-01

    Device closure of secundum atrial septal defect (ASD) is the treatment of choice when anatomy is favourable. Amplatzer device has remained the gold standard for closure of ASD. Cobra deformity is a well-reported problem with devices. Recently, Tulip deformity has been reported in a single case. We report a series of cases where we noted Tulip deformity along with inability to retract the device in the sheath in Cera Lifetech devices. This resulted in prolongation of procedure, excessive fluoroscopic exposure and additional interventional procedures not usually anticipated in ASD device closure. We believe that the problem is due to the stiffness of the device resulting in its inability to be retracted into the sheath. We also report a unique way of retrieving the device.

  10. Removal of a Günther Tulip filter after 3,006 days.

    PubMed

    Lynch, Frank C

    2011-03-01

    Patients may be denied the opportunity to have their inferior vena cava (IVC) filters removed because of a perception that retrievable filters that have been in place for a long period of time may be more technically difficult or hazardous to remove. A case report on the removal of a Günther Tulip filter that was implanted for a total of 3,006 days is presented. This case report adds to the literature that suggests that no time limits may exist after which many retrievable IVC filters can no longer be safely removed. Copyright © 2011 SIR. Published by Elsevier Inc. All rights reserved.

  11. Numerical simulation of tulip flame dynamics

    SciTech Connect

    Cloutman, L.D.

    1991-11-30

    A finite difference reactive flow hydrodynamics program based on the full Navier-Stokes equations was used to simulate the combustion process in a homogeneous-charge, constant-volume combustion bomb in which an oddly shaped flame, known as a tulip flame'' in the literature, occurred. The tulip flame'' was readily reproduced in the numerical simulations, producing good agreement with the experimental flame shapes and positions at various times. The calculations provide sufficient detail about the dynamics of the experiment to provide some insight into the physical mechanisms responsible for the peculiar flame shape. Several factors seem to contribute to the tulip formation. The most important process is the baroclinic production of vorticity by the flame front, and this rate of production appears to be dramatically increased by the nonaxial flow generated when the initial semicircular flame front burns out along the sides of the chamber. The vorticity produces a pair of vortices behind the flame that advects the flame into the tulip shape. Boundary layer effects contribute to the details of the flame shape next to the walls of the chamber, but are otherwise not important. 24 refs.

  12. Numerical simulation of tulip flame dynamics

    SciTech Connect

    Cloutman, L.D.

    1991-11-30

    A finite difference reactive flow hydrodynamics program based on the full Navier-Stokes equations was used to simulate the combustion process in a homogeneous-charge, constant-volume combustion bomb in which an oddly shaped flame, known as a ``tulip flame`` in the literature, occurred. The ``tulip flame`` was readily reproduced in the numerical simulations, producing good agreement with the experimental flame shapes and positions at various times. The calculations provide sufficient detail about the dynamics of the experiment to provide some insight into the physical mechanisms responsible for the peculiar flame shape. Several factors seem to contribute to the tulip formation. The most important process is the baroclinic production of vorticity by the flame front, and this rate of production appears to be dramatically increased by the nonaxial flow generated when the initial semicircular flame front burns out along the sides of the chamber. The vorticity produces a pair of vortices behind the flame that advects the flame into the tulip shape. Boundary layer effects contribute to the details of the flame shape next to the walls of the chamber, but are otherwise not important. 24 refs.

  13. A Discussion of Gunther Schuller's Approach to Conducting: Implications for the Instrumental Music Classroom

    ERIC Educational Resources Information Center

    Waldron, Janice

    2008-01-01

    What professional musicians say and do affects the attitudes and actions of music educators in the classroom. One example comes from influential conductor/composer, Gunther Schuller, who, in his controversial 1997 book, "The Compleat Conductor", defines, espouses, and recommends his own "philosophy of conducting." An examination of his ideas and,…

  14. Attenuating Growth: A More Humane Alternative--A Response to Gunther and Diekema

    ERIC Educational Resources Information Center

    Romer, Lyle T; Crocker, Allen C.

    2006-01-01

    An astonishing tract has been published that involves a plan for the modification of the growth of children with severe developmental disabilities by administering hormonal treatments designed to arrest growth at an early age (Gunther & Diekema, 2006). The schema put forth is based upon the concern of the authors for the burdensome effect families…

  15. Growth Attenuation and Due Process: "A Response to Gunther and Diekema (2006)"

    ERIC Educational Resources Information Center

    Turnbull, Rud; Wehmeyer, Michael; Turnbull, Ann; Stowe, Matt

    2006-01-01

    This article presents the authors' response to Gunther and Diekema's argument about growth attenuation and due process. As a case study, growth attenuation raises complicated issues. The authors address some issues that have not been sufficiently addressed. Those involve family support, assistive technology, constitutional rights to "self," the…

  16. Growth Attenuation and Due Process: "A Response to Gunther and Diekema (2006)"

    ERIC Educational Resources Information Center

    Turnbull, Rud; Wehmeyer, Michael; Turnbull, Ann; Stowe, Matt

    2006-01-01

    This article presents the authors' response to Gunther and Diekema's argument about growth attenuation and due process. As a case study, growth attenuation raises complicated issues. The authors address some issues that have not been sufficiently addressed. Those involve family support, assistive technology, constitutional rights to "self," the…

  17. Contact dermatitis caused by tulips: identification of contact sensitizers in tulip workers of Kashmir Valley in North India.

    PubMed

    Hassan, Iffat; Rasool, Farhan; Akhtar, Saniya; Kamili, Afifa; Rather, Parvaiz; Kanth, Raihana; Bhat, Yasmeen; Rather, Shagufta; Mubashir, Syed; Yaseen, Atiya; Bashir, Safia

    2017-09-21

    Tulip, belonging to the genus Tulipa and family Liliaceae, is a spring-blooming perennial that grows from bulbs. Owing to manual handling, contact dermatitis can occur in professionals at any stage of the growth cycle of the tulip plant. To determine the clinical pattern of contact dermatitis resulting from tulip plant cultivation, and to assess contact allergy in workers coming into contact with this plant. One hundred and sixty-four tulip workers were screened, and 48 patients with suspected contact dermatitis were patch tested with 39 allergens, including haptens from the Indian baseline series, a plant series, and extracts from different parts of the tulip plant. Thirty-nine positive patch test reactions were observed in 21 patients. Seventeen patients showed positive reactions to either α-methylene-γ-butyrolactone or to tulip plant extract. Clinical relevance was observed for 13 of 17 positive patch test reactions. Contact dermatitis is an important health hazard in workers dealing with tulip bulbs. Further studies to identify and isolate other possible tulip allergens, and to quantify the amounts of allergens in different parts of the tulip plant, are recommended. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  18. Continuous steam hydrolysis of tulip poplar

    SciTech Connect

    Fieber, C.; Colcord, A.R.; Faass, S.; Muzzy, J.D.; Roberts, R.S.

    1982-08-01

    To produce ethanol from hardwood it is desirable to fractionate the hardwood in order to produce a relatively pure cellulosic pulp for dilute acid hydrolysis. An experimental investigation of continuous steam hydrolysis of tulip poplar wood chips indicates that over 90% of the lignin present can be extracted by 0.1N sodium hydroxide, resulting in a cellulose pulp containing over 90% hexosan. The study was performed using a Stake Technology, Ltd., continuous digester rated at one oven dry ton per hour of wood chips. The yields of hexosans, hexoses, xylan, xylose, lignin, furfural, acetic acid and methanol were determined as a function of residence time and steam pressure in the digester. The information provides a basis for establishing a material and energy balance for a hardwood to ethanol plant.

  19. Introducer curving technique for the prevention of tilting of transfemoral Günther Tulip inferior vena cava filter.

    PubMed

    Xiao, Liang; Huang, De-sheng; Shen, Jing; Tong, Jia-jie

    2012-01-01

    To determine whether the introducer curving technique is useful in decreasing the degree of tilting of transfemoral Tulip filters. The study sample group consisted of 108 patients with deep vein thrombosis who were enrolled and planned to undergo thrombolysis, and who accepted transfemoral Tulip filter insertion procedure. The patients were randomly divided into Group C and Group T. The introducer curving technique was Adopted in Group T. The post-implantation filter tilting angle (ACF) was measured in an anteroposterior projection. The retrieval hook adhering to the vascular wall was measured via tangential cavogram during retrieval. The overall average ACF was 5.8 ± 4.14 degrees. In Group C, the average ACF was 7.1 ± 4.52 degrees. In Group T, the average ACF was 4.4 ± 3.20 degrees. The groups displayed a statistically significant difference (t = 3.573, p = 0.001) in ACF. Additionally, the difference of ACF between the left and right approaches turned out to be statistically significant (7.1 ± 4.59 vs. 5.1 ± 3.82, t = 2.301, p = 0.023). The proportion of severe tilt (ACF ≥ 10°) in Group T was significantly lower than that in Group C (9.3% vs. 24.1%, χ(2) = 4.267, p = 0.039). Between the groups, the difference in the rate of the retrieval hook adhering to the vascular wall was also statistically significant (2.9% vs. 24.2%, χ(2) = 5.030, p = 0.025). The introducer curving technique appears to minimize the incidence and extent of transfemoral Tulip filter tilting.

  20. Tulip malformation of the left atrial disc in the Lifetech Cera ASD device: a novel complication of percutaneous ASD closure.

    PubMed

    Hayes, Nicholas; Rosenthal, Eric

    2012-03-01

    A previously unreported tulip-like malformation of the left atrial disc was encountered during percutaneous closure of an atrial septal defect (ASD) using the LifeTech Cera ASD device, requiring snare assistance to permit recapture into the delivery sheath. This was likely to be as a result of attempting to recapture the left atrial disc whilst it remained in contact with some part of the atrial septum or left atrial wall. To help avoid this, it is recommended to ensure complete intracavity positioning of the Cera device prior to retrieval into the sheath. Copyright © 2011 Wiley Periodicals, Inc.

  1. Bioinformatics of the TULIP domain superfamily.

    PubMed

    Kopec, Klaus O; Alva, Vikram; Lupas, Andrei N

    2011-08-01

    Proteins of the BPI (bactericidal/permeability-increasing protein)-like family contain either one or two tandem copies of a fold that usually provides a tubular cavity for the binding of lipids. Bioinformatic analyses show that, in addition to its known members, which include BPI, LBP [LPS (lipopolysaccharide)-binding protein)], CETP (cholesteryl ester-transfer protein), PLTP (phospholipid-transfer protein) and PLUNC (palate, lung and nasal epithelium clone) protein, this family also includes other, more divergent groups containing hypothetical proteins from fungi, nematodes and deep-branching unicellular eukaryotes. More distantly, BPI-like proteins are related to a family of arthropod proteins that includes hormone-binding proteins (Takeout-like; previously described to adopt a BPI-like fold), allergens and several groups of uncharacterized proteins. At even greater evolutionary distance, BPI-like proteins are homologous with the SMP (synaptotagmin-like, mitochondrial and lipid-binding protein) domains, which are found in proteins associated with eukaryotic membrane processes. In particular, SMP domain-containing proteins of yeast form the ERMES [ER (endoplasmic reticulum)-mitochondria encounter structure], required for efficient phospholipid exchange between these organelles. This suggests that SMP domains themselves bind lipids and mediate their exchange between heterologous membranes. The most distant group of homologues we detected consists of uncharacterized animal proteins annotated as TM (transmembrane) 24. We propose to group these families together into one superfamily that we term as the TULIP (tubular lipid-binding) domain superfamily.

  2. Identification of jasmonic acid and its methyl ester as gum-inducing factors in tulips.

    PubMed

    Skrzypek, Edyta; Miyamoto, Kensuke; Saniewski, Marian; Ueda, Junichi

    2005-02-01

    The purpose of this study was to identify endogenous factors that induce gummosis and to show their role in gummosis in tulip (Tulipa gesneriana L. cv. Apeldoorn) stems. Using procedures to detect endogenous factors that induce gum in the stem of tulips, jasmonic acid (JA) and methyl jasmonate (JA-Me) were successfully identified using gas-liquid chromatography-mass spectrometry. Total amounts of JA and JA-Me designated as jasmonates in tulip stems were also estimated at about 70-80 ng/g fresh weight, using deuterium-labeled jasmonates as internal standards. The application of JA and JA-Me as lanolin pastes substantially induced gums in tulip stems with ethylene production. The application of ethephon, an ethylene-generating compound, however, induced no gummosis although it slightly affected jasmonate content in tulip stems. These results strongly suggest that JA and JA-Me are endogenous factors that induce gummosis in tulip stems.

  3. Spot Anthracnose Disease Caused by Colletotrichum gloeosporioides on Tulip Tree in Korea.

    PubMed

    Choi, Okryun; Choi, Okhee; Kwak, Youn-Sig; Kim, Jinwoo; Kwon, Jin-Hyeuk

    2012-03-01

    The tulip tree (Liriodendron chinense) has been widely cultivated in Korea as a street or garden tree for its large flowers, which have a superficial resemblance to tulips. Occurrence of anthracnose disease on the leaves of tulip trees growing on the campus of Gyeongsang National University, Jinju, Korea, has been observed. Based on mycological characteristics, pathogenicity, and internal transcribed spacer sequence, the causal fungus was identified as Colletotrichum gloeosporioides. This is the first report on anthracnose disease caused by C. gloeosporioides on tulip trees in Korea.

  4. Tulip flames: changes in shape of premixed flames propagating in closed tubes

    NASA Astrophysics Data System (ADS)

    Dunn-Rankin, D.; Sawyer, R. F.

    The experimental results that are the subject of this communication provide high-speed schlieren images of the closed-tube flame shape that has come to be known as the tulip flame. The schlieren images, along with in-chamber pressure records, help demonstrate the effects of chamber length, equivalence ratio, and igniter geometry on formation of the tulip flame. The pressure/time records show distinct features which correlate with flame shape changes during the transition to tulip. The measurements indicate that the basic tulip flame formation is a robust phenomenon that depends on little except the overall geometry of the combustion vessel.

  5. Gunther von Hagens and Body Worlds part 2: The anatomist as priest and prophet.

    PubMed

    Moore, Charleen M; Brown, C Mackenzie

    2004-03-01

    Part 1 of this two-part series highlighted tensions between the anatomical quest for scientific knowledge about the human interior and artistic representations of the anatomized body, contrasting the roles of Goethe's scientific Prosektor and humanistic Proplastiker-roles disturbingly fused in Gunther von Hagens. Part 2 first examines religious interpretations of the human body that fuel the tensions manifest in anatomy art. The body in Western cultures is a sacred text amenable to interpretation as handiwork of God, habitation for the soul, and vehicle for resurrection. As handiwork of God the body beckons the anatomist's scalpel, helping establish dissection as the hallmark of Western medicine. The body as divinely designed machine encompasses the idea of an indwelling soul expressing its will in actions mediated through the intricate network of muscles-an understanding reflected in the oft occurring muscle men of early anatomical textbooks. Interconnections of body and soul in medieval somatic spirituality are examined with reference to ideas of resurrection and their impact on anatomical illustration. Part 2 concludes with consideration of von Hagens as priest and prophet, culminating in the Promethean impulse that recognizes not God but ourselves as proper owners and molders of our destiny, embodied in the plastinator's visionary quest to create the superhuman.

  6. Nitrogen ion utilization by tulip poplar (Liriodendron tulipifera L. ) seedlings

    SciTech Connect

    Mann, L.K.

    1982-01-01

    Growth responses of one-year-old tulip poplar seedlings were determined for different nitrogen sources (HN/sub 4/NO/sub 3/, NH+/sub 4/, NO-/sub 3/, no nitrogen) at 336 ppm N in nutrient culture. At the end of three months, there were no significant differences in growth observed among treatments in terms of stem elongation, leaf area, and leaf size. After four months, however, seedlings of the NH/sub 4/NO/sub 3/ treatment exhibited significantly (P<0.05) greater growth (final weight gain and stem elongation) than all other nitrogen sorces. Growth was slightly less for the NO-/sub 3/ treatment plants, but compared with NH+/sub 4/ and no nitrogen treatment, both NH/sub 4/NO/sub 3/ and NO-/sub 3/ treatments exhibited significantly greater growth responses. NO-/sub 3/ is recommended as the sole nitrogen source, especially for small seedlings of tulip poplar.

  7. An evolution equation modeling inversion of tulip flames

    SciTech Connect

    Dold, J.W.; Joulin, G.

    1995-02-01

    The authors attempt to reduce the number of physical ingredients needed to model the phenomenon of tulip-flame inversion to a bare minimum. This is achieved by synthesizing the nonlinear, first-order Michelson-Sivashinsky (MS) equation with the second order linear dispersion relation of Landau and Darrieus, which adds only one extra term to the MS equation without changing any of its stationary behavior and without changing its dynamics in the limit of small density change when the MS equation is asymptotically valid. However, as demonstrated by spectral numerical solutions, the resulting second-order nonlinear evolution equation is found to describe the inversion of tulip flames in good qualitative agreement with classical experiments on the phenomenon. This shows that the combined influences of front curvature, geometric nonlinearity and hydrodynamic instability (including its second-order, or inertial effects, which are an essential result of vorticity production at the flame front) are sufficient to reproduce the inversion process.

  8. TULIPS: the Uppsala-Linkoping Image Processing System.

    PubMed

    Holmquist, J; Antonsson, D; Bengtsson, E; Danielsson, P E; Eriksson, O; Hedblom, T; Mårtensson, A; Nordin, B; Olsson, T; Stenkvist, B

    1981-09-01

    The Uppsala-Linkoping Image Processing System, TULIPS, is described. TULIPS, a hardware-software system designed for cell image processing, was developed at Uppsala University Hospital in cooperation with the Department of Electrical Engineering at Linkoping University. The hardware part of the image processing system is built around a high-speed data bus with a capacity of about 40 M byte/sec connected to a PDP-11/55 host computer. An image memory, an LSI-11 microcomputer and a video interface for displaying the image memory content on a TV monitor are also connected to the high-speed bus. An automated microscope and a "Poulsen processor" for low resolution segmentation, both to be attached to the high-speed bus, are being developed. A monitor and an interpreter for an image processing language have been implemented on the host computer. This software system allows interactive, as well as batch, processing. The degree of user interaction is easily adapted to the user's needs. The image processing language is command oriented, and it is easily expanded by adding new commands. The system has been used both for studies in the field of quantitative microscopy and as a platform for development and testing of new image processing algorithms.

  9. Micropropagation of tulip: production of virus-free stock plants.

    PubMed

    Podwyszyńska, Małgorzata; Sochacki, Dariusz

    2010-01-01

    We describe here a new tulip micropropagation method based on the cyclic shoot multiplication in presence of the thidiazuron (TDZ), which enables the production of virus-free stock plants, speeds up breeding, and provides new genotypes for the market. In our novel protocol, cyclic shoot multiplication can be performed for 2-3 years by using TDZ instead of other cytokinins, as 6-benzylaminopurine (BAP) and N(6)-(-isopentyl)adenine (2iP). It makes possible to produce 500-2,000 microbulbs from one healthy plant. There are six main stages of tulip micropropagation. Stage 0 is the selection of true-to-type and virus-free plants, confirmed by ELISA. Fragments of flower stems isolated from bulbs are used as initial explants. Shoot multiplication is based on the regeneration of adventitious shoots, which are sub-cultured every 8 weeks. In the Stage 3, the specially prepared shoots are induced by low temperature treatment to form bulbs which finally develop on a sucrose-rich medium at 20 degrees C. Bulbs are then dried for 6 weeks and rooted in vivo. The number of multiplication subcultures should be limited to 5-10 cycles in order to lower the risk of mutation. Virus indexing should be repeated 3-4 times, at the initial stage and then during shoot multiplication. Genetic stability of micropropagated shoots can be confirmed using molecular markers.

  10. TULIPs: tunable, light-controlled interacting protein tags for cell biology.

    PubMed

    Strickland, Devin; Lin, Yuan; Wagner, Elizabeth; Hope, C Matthew; Zayner, Josiah; Antoniou, Chloe; Sosnick, Tobin R; Weiss, Eric L; Glotzer, Michael

    2012-03-04

    Naturally photoswitchable proteins offer a means of directly manipulating the formation of protein complexes that drive a diversity of cellular processes. We developed tunable light-inducible dimerization tags (TULIPs) based on a synthetic interaction between the LOV2 domain of Avena sativa phototropin 1 (AsLOV2) and an engineered PDZ domain (ePDZ). TULIPs can recruit proteins to diverse structures in living yeast and mammalian cells, either globally or with precise spatial control using a steerable laser. The equilibrium binding and kinetic parameters of the interaction are tunable by mutation, making TULIPs readily adaptable to signaling pathways with varying sensitivities and response times. We demonstrate the utility of TULIPs by conferring light sensitivity to functionally distinct components of the yeast mating pathway and by directing the site of cell polarization.

  11. Use of Retrievable Compared to Permanent Inferior Vena Cava Filters: A Single-Institution Experience

    SciTech Connect

    Ha, Thuong G. Van Chien, Andy S.; Funaki, Brian S.; Lorenz, Jonathan; Piano, Giancarlo; Shen, Maxine; Leef, Jeffrey

    2008-03-15

    The purpose of this study was to review the use, safety, and efficacy of retrievable inferior vena cava (IVC) filters in their first 5 years of availability at our institution. Comparison was made with permanent filters placed in the same period. A retrospective review of IVC filter implantations was performed from September, 1999, to September, 2004, in our department. These included both retrievable and permanent filters. The Recovery nitinol and Guenther tulip filters were used as retrievable filters. The frequency of retrievable filter used was calculated. Clinical data and technical data related to filter placement were reviewed. Outcomes, including pulmonary embolism, complications associated with placement, retrieval, or indwelling, were calculated. During the study period, 604 IVC filters were placed. Of these, 97 retrievable filters (16%) were placed in 96 patients. There were 53 Recovery filter and 44 Tulip filter insertions. Subjects were 59 women and 37 men; the mean age was 52 years, with a range of from 18 to 97 years. The placement of retrievable filters increased from 2% in year 1 to 32% in year 5 of the study period. The total implantation time for the permanent group was 145,450 days, with an average of 288 days (range, 33-1811 days). For the retrievable group, the total implantation time was 21,671 days, with an average of 226 days (range, 2-1217 days). Of 29 patients who returned for filter retrieval, the filter was successfully removed in 28. There were 14 of 14 successful Tulip filter retrievals and 14 of 15 successful Recovery filter retrievals. In one patient, after an indwelling period of 39 days, a Recovery nitinol filter could not be removed secondary to a large clot burden within the filter. For the filters that were removed, the mean dwell time was 50 days for the Tulip type and 20 days for the Recovery type. Over the follow-up period there was an overall PE incidence of 1.4% for the permanent group and 1% for the retrieval group. In

  12. Use of retrievable compared to permanent inferior vena cava filters: a single-institution experience.

    PubMed

    Van Ha, Thuong G; Chien, Andy S; Funaki, Brian S; Lorenz, Jonathan; Piano, Giancarlo; Shen, Maxine; Leef, Jeffrey

    2008-01-01

    The purpose of this study was to review the use, safety, and efficacy of retrievable inferior vena cava (IVC) filters in their first 5 years of availability at our institution. Comparison was made with permanent filters placed in the same period. A retrospective review of IVC filter implantations was performed from September, 1999, to September, 2004, in our department. These included both retrievable and permanent filters. The Recovery nitinol and Günther tulip filters were used as retrievable filters. The frequency of retrievable filter used was calculated. Clinical data and technical data related to filter placement were reviewed. Outcomes, including pulmonary embolism, complications associated with placement, retrieval, or indwelling, were calculated. During the study period, 604 IVC filters were placed. Of these, 97 retrievable filters (16%) were placed in 96 patients. There were 53 Recovery filter and 44 Tulip filter insertions. Subjects were 59 women and 37 men; the mean age was 52 years, with a range of from 18 to 97 years. The placement of retrievable filters increased from 2% in year 1 to 32% in year 5 of the study period. The total implantation time for the permanent group was 145,450 days, with an average of 288 days (range, 33-1811 days). For the retrievable group, the total implantation time was 21,671 days, with an average of 226 days (range, 2-1217 days). Of 29 patients who returned for filter retrieval, the filter was successfully removed in 28. There were 14 of 14 successful Tulip filter retrievals and 14 of 15 successful Recovery filter retrievals. In one patient, after an indwelling period of 39 days, a Recovery nitinol filter could not be removed secondary to a large clot burden within the filter. For the filters that were removed, the mean dwell time was 50 days for the Tulip type and 20 days for the Recovery type. Over the follow-up period there was an overall PE incidence of 1.4% for the permanent group and 1% for the retrieval group. In

  13. [Morphologic and AFLP analysis of relationships between tulip species Tulipa biebersteiniana (Liliaceae)].

    PubMed

    Kutlunina, N A; Polezhaeva, M A; Permiakova, M V

    2013-04-01

    In populations of four species of tulips, (Tulipa biebersteiniana, T. patens, T. scytica and T. riparia) from the Volgograd, Kurgansk, Orenburg, and Chelyabinsk regions and the Republic of Bashkortostan, genetic diversity was studied by means of morphological and AFLP analysis. A morphological analysis of seven quantitative and two qualitative criteria was carried out. Three selective EcoRI/MseI primer pairs allowed one to genotype 81 individuals from 13 tulip populations with 87 loci. The low level of variability by AFLP loci were revealed in all species, including T. biebersteiniana (P = 20.41%, UH(e) = 0.075), T. patens (26.97%, 0.082), T. scytica (27.53%, 0.086), and T. riparia (27.72%, 0.096). According to the AMOVA results, the variability proportion that characterizes the differences between the four Tulip species was lower (F(CT) = 0.235) than between populations within species (F(ST) = 0.439). Tulipa patens is well differentiated by means of Nei's distances, coordination, and analysis in the STRUCTURE program. An analysis in the STRUCTURE revealed four genetic groups of tulips that are not completely in accordance with the analyzed species. This acknowledges the presence of complicated genetic process in the tulip population.

  14. Jasmonates are essential factors inducing gummosis in tulips: mode of action of jasmonates focusing on sugar metabolism.

    PubMed

    Skrzypek, Edyta; Miyamoto, Kensuke; Saniewski, Marian; Ueda, Junichi

    2005-05-01

    The purpose of this study was to know the mechanism of jasmonates to induce gummosis in tulip (Tulipa gesneriana L. cv. Apeldoorn) shoots, especially on the focus of sugar metabolism. Gummosis in the first internode of tulip plants was induced by the application of methyl jasmonate (JA-Me, 1% w/w in lanolin) and jasmonic acid (JA, 1% w/w in lanolin) 5 days after application and strongly stimulated by the simultaneous application of ethylene-releasing compound, ethephon (2-chloroethylphosphonic acid, 1% w/w in lanolin), although ethephon alone had little effect. JA-Me stimulated ethylene production of the first internodes of tulips, ethylene production increasing up to more than 5 times at day 1 and day 3 after the application. On the other hand, application of ethephon did not increase endogenous levels of jasmonates in tulip stems. Analysis of composition of tulip gums revealed that they were consisted of glucuronoarabinoxylan with an average molecular weight of ca. 700 kDa. JA-Me strongly decreased the total amount of soluble sugars in tulip stems even in 1 day after application, being ca. 50% of initial values 5 days after application, but ethephon did not. However, both JA-Me and ethephon had almost no effect on the neutral sugar compositions of soluble sugars mainly consisting of glucose, mannose and xylose in ratio of 20:2:1 and traces of arabinose. Both JA-Me and ethephon applied exogenously stimulated senescence of tulip shoots shown by the loss of chlorophyll. These results strongly suggest that the essential factor of gummosis in tulips is jasmonates affecting the sugar metabolism in tulip shoots. The mode of action of jasmonates to induce gummosis of tulip shoots is discussed in relation to ethylene production, sugar metabolism and senescence.

  15. Characterization of protein phosphatase 2A acting on phosphorylated plasma membrane aquaporin of tulip petals.

    PubMed

    Azad, Abul Kalam; Sawa, Yoshihiro; Ishikawa, Takahiro; Shibata, Hitoshi

    2004-05-01

    A protein phosphatase holo-type enzyme (38, 65, and 75 kDa) preparation and a free catalytic subunit (38 kDa) purified from tulip petals were characterized as protein phosphatase 2A (PP2A) by immunological and biochemical approaches. The plasma membrane containing the putative plasma membrane aquaporin (PM-AQP) was prepared from tulip petals, phosphorylated in vitro, and used as the substrate for both of the purified PP2A preparations. Although both preparations dephosphorylated the phosphorylated PM-AQP at 20 degrees C, only the holo-type enzyme preparation acted at 5 degrees C on the phosphorylated PM-AQP with higher substrate specificity, suggesting that regulatory subunits are required for low temperature-dependent dephosphorylation of PM-AQP in tulip petals.

  16. Late endovascular removal of Günther-Tulip inferior vena cava filter and stent reconstruction of chronic post-thrombotic iliocaval obstruction after 4753 days of filter dwell time: a case report with review of literature.

    PubMed

    Doshi, Mehul Harshad; Narayanan, Govindarajan

    2016-12-01

    Chronic post-thrombotic obstruction of the inferior vena cava (IVC) or iliocaval junction is an uncommon complication of long indwelling IVC filter. When such an obstruction is symptomatic, endovascular treatment options include stent placement with or without filter retrieval. Filter retrieval becomes increasingly difficult with longer dwell times. We present a case of symptomatic post-thrombotic obstruction of the iliocaval junction related to Günther-Tulip IVC filter (Cook Medical Inc, Bloomington, IN) with dwell time of 4753 days, treated successfully with endovascular filter removal and stent reconstruction. Filter retrieval and stent reconstruction may be a treatment option in symptomatic patients with filter-related chronic IVC or iliocaval junction obstruction, even after prolonged dwell time.

  17. Hydrolysis kinetics of tulip tree xylan in hot compressed water.

    PubMed

    Yoon, Junho; Lee, Hun Wook; Sim, Seungjae; Myint, Aye Aye; Park, Hee Jeong; Lee, Youn-Woo

    2016-08-01

    Lignocellulosic biomass, a promising renewable resource, can be converted into numerous valuable chemicals post enzymatic saccharification. However, the efficacy of enzymatic saccharification of lignocellulosic biomass is low; therefore, pretreatment is necessary to improve the efficiency. Here, a kinetic analysis was carried out on xylan hydrolysis, after hot compressed water pretreatment of the lignocellulosic biomass conducted at 180-220°C for 5-30min, and on subsequent xylooligosaccharide hydrolysis. The weight ratio of fast-reacting xylan to slow-reacting xylan was 5.25 in tulip tree. Our kinetic results were applied to three different reaction systems to improve the pretreatment efficiency. We found that semi-continuous reactor is promising. Lower reaction temperatures and shorter space times in semi-continuous reactor are recommended for improving xylan conversion and xylooligosaccharide yield. In the theoretical calculation, 95% of xylooligosaccharide yield and xylan conversion were achieved simultaneously with high selectivity (desired product/undesired product) of 100 or more. Copyright © 2016. Published by Elsevier Ltd.

  18. A single center experience with retrievable IVC filters.

    PubMed

    Renno, Anas; Khateeb, Faisal; Kazan, Viviane; Qu, Weikai; Gollapudi, Anurekha; Aplin, Brett; Abbas, Jihad; Zelenock, Gerald; Nazzal, Munier

    2015-08-01

    To evaluate retrievable IVC filters in our institution and assess their retrieval following a well-structured follow up program. Retrospective cohort study. The medical records of patients implanted with retrievable IVC filters were reviewed. All retrievable filter insertions between July 2007 and August 2011 at our institution were reviewed. Data was analyzed for age, gender, indication, complications, retrieval rate, and brand of filter inserted. Statistical analysis was done using SPSS software v19. Chi-square was used to compare discrete data and t-test for continuous data. P < 0.05 was significant. A total of 484 patients were reviewed of which 258 (53.1%) had a complete medical record. And 96 (37.2%) filters were placed as permanent at the time of insertion. An additional 40 (15.5%) filters were converted to permanent (total permanent filters 136; 52.7%). Death was reported in 26 (10%) patients and 96 (37.2%) out of the remaining 232 patients presented for potential retrieval. Also, 73 (28.2%) had an attempt to retrieve the filters, 69 (94.5%) were successful and 4 (5.4%) failed to retrieve. The remaining 23 (8.9%) patients declined retrieval. Filters studied include Celect (38%), Bard (31.4%), Option (26.2%), Tulip (4.1%), and Recovery (0.2%). Bard was more commonly used as a retrievable filter (80.9%). Retrieval on the first attempt was 90.4% (n = 66) successful. Of the remaining seven filters, three were successfully retrieved on a second attempt, and four failed to retrieve due to filter tilt. The success rates of retrieval for Celect and Tulip were significantly lower than for Bard (p = 0.04 and 0.023, respectively). Our study showed that a variety of IVC filters can be retrieved successfully with minimal complication rates. In more than half of our patients, IVC filters were used as permanent. Failure of retrieval was most frequently due to filter tilting. © The Author(s) 2014.

  19. Direct profiling of phytochemicals in tulip tissues and in vivo monitoring of the change of carbohydrate content in tulip bulbs by probe electrospray ionization mass spectrometry.

    PubMed

    Yu, Zhan; Chen, Lee Chuin; Suzuki, Hiroaki; Ariyada, Osamu; Erra-Balsells, Rosa; Nonami, Hiroshi; Hiraoka, Kenzo

    2009-12-01

    Probe electrospray ionization (PESI) is a recently developed ESI-based ionization technique which generates electrospray from the tip of a solid needle. In this study, we have applied PESI interfaced with a time of flight mass spectrometer (TOF-MS) for direct profiling of phytochemicals in a section of a tulip bulb in different regions, including basal plate, outer and inner rims of scale, flower bud and foliage leaves. Different parts of tulip petals and leaves have also been investigated. Carbohydrates, amino acids and other phytochemicals were detected. A series of in vivo PESI-MS experiments were carried out on the second outermost scales of four living tulip bulbs to monitoring the change of carbohydrate content during the first week of initial growth. The breakdown of carbohydrates was observed which was in accordance with previous reports achieved by other techniques. This study has indicated that PESI-MS can be used for rapid and direct analysis of phytochemicals in living biological systems with advantages of low sample consumption and little sample preparation. Therefore, PESI-MS can be a new choice for direct analysis/profiling of bioactive compounds or monitoring metabolic changes in living biological systems.

  20. Observations on the fauna that visit African Tulip Tree (Spathodea campanulata Beauv.) forests in Puerto Rico

    Treesearch

    Oscar J. Abelleira Martinez

    2008-01-01

    Diurnal field observations in secondary forests dominated by the introduced African tulip tree (Spathodea campanulata) in Puerto Rico show a faunal assemblage that consists mostly of native species (81.1 percent). The most abundant species were common birds and reptiles, yet some uncommon fauna appear to be visiting or residing in these forests. The observations...

  1. Allometry, biomass, and chemical content of novel African Tulip Tree (Spathodea campanulata) forests in Puerto Rico

    Treesearch

    Ariel E. Lugo; Oscar J. Abelleira; Alexander Collado; Christian A. Viera; Cynthia Santiago; Diego O. Velez; Emilio Soto; Giovanni Amaro; Graciela Charon; Jr. Colon; Jennifer Santana; Jose L. Morales; Katherine Rivera; Luis Ortiz; Luis Rivera; Mianel Maldonado; Natalia Rivera; Norelis J. Vazquez

    2011-01-01

    The African tulip tree, Spathodea campanulata, the most common tree in Puerto Rico, forms novel forest types with mixtures of native and other introduced tree species. Novel forests increase in area in response to human activity and there is no information about their biomass accumulation and nutrient cycling. We established allometric relationships and chemically...

  2. Use of metabolic activation systems of tulip bulbs in the Ames test for environmental mutagens

    SciTech Connect

    Higashi, K.; Ikeuchi, K.; Karasaki, Y.

    1982-01-01

    The effects of trace amounts of PAH on the carcinogenesis in animals and human beings and on the ecology of plants are examined. An in vitro method has been developed which traces the metabolic fate of environmental mutagens in tulip bulbs. The method has been successful in confirming the presence of metabolic activation systems only for potent carcinogens. (JMT)

  3. The High-Precision Tulip: Development and Combat Employment of the Soviet Laser-Guided Mortar Round

    DTIC Science & Technology

    2006-01-01

    designator (the 2S4) and the name of a flower (the tulip).2 The tulip has a variety of rounds. The 130-kilogram (287 pound) fragmentation-blast round...LTD) that is located at a forward observation post. The laser beam is laid on the target and the reflection from the target creates a petal -shaped...electronic echo. The optical-electronic tracking head must acquire this petal -shaped electronic echo and, scanning it, direct the round to the target

  4. Assessment of Snared-Loop Technique When Standard Retrieval of Inferior Vena Cava Filters Fails

    SciTech Connect

    Doody, Orla Noe, Geertje; Given, Mark F.; Foley, Peter T.; Lyon, Stuart M.

    2009-01-15

    Purpose To identify the success and complications related to a variant technique used to retrieve inferior vena cava filters when simple snare approach has failed. Methods A retrospective review of all Cook Guenther Tulip filters and Cook Celect filters retrieved between July 2006 and February 2008 was performed. During this period, 130 filter retrievals were attempted. In 33 cases, the standard retrieval technique failed. Retrieval was subsequently attempted with our modified retrieval technique. Results The retrieval was successful in 23 cases (mean dwell time, 171.84 days; range, 5-505 days) and unsuccessful in 10 cases (mean dwell time, 162.2 days; range, 94-360 days). Our filter retrievability rates increased from 74.6% with the standard retrieval method to 92.3% when the snared-loop technique was used. Unsuccessful retrieval was due to significant endothelialization (n = 9) and caval penetration by the filter (n = 1). A single complication occurred in the group, in a patient developing pulmonary emboli after attempted retrieval. Conclusion The technique we describe increased the retrievability of the two filters studied. Hook endothelialization is the main factor resulting in failed retrieval and continues to be a limitation with these filters.

  5. Infinitely robust order and local order-parameter tulips in Apollonian networks with quenched disorder.

    PubMed

    Kaplan, C Nadir; Hinczewski, Michael; Berker, A Nihat

    2009-06-01

    For a variety of quenched random spin systems on an Apollonian network, including ferromagnetic and antiferromagnetic bond percolation and the Ising spin glass, we find the persistence of ordered phases up to infinite temperature over the entire range of disorder. We develop a renormalization-group technique that yields highly detailed information, including the exact distributions of local magnetizations and local spin-glass order parameters, which turn out to exhibit, as function of temperature, complex and distinctive tulip patterns.

  6. The acidic amino acids of tulip: isolation of γ-ethylideneglutamic acid

    PubMed Central

    Fowden, L.

    1966-01-01

    1. γ-Ethylideneglutamic acid has been isolated from fruit capsules of tulip plants. 2. The assigned structure was indicated by examining the products formed after oxidation and catalytic hydrogenation and was confirmed by nuclear-magnetic-resonance spectroscopy and by synthesis of γ-ethylglutamic acid. 3. The ability of γ-ethylideneglutamic acid to participate in transamination and decarboxylation reactions was examined. PMID:5938664

  7. Genetic mapping of resistance to Fusarium oxysporum f. sp. tulipae in tulip.

    PubMed

    Tang, Nan; van der Lee, Theo; Shahin, Arwa; Holdinga, Maarten; Bijman, Paul; Caser, Matteo; Visser, Richard G F; van Tuyl, Jaap M; Arens, Paul

    Fusarium oxysporum is a major problem in the production of tulip bulbs. Breeding for resistant cultivars through a conventional approach is a slow process due to the long life cycle of tulip. Until now, marker-assisted selection (MAS) has been hampered by the large genome size and the absence of a genetic map. This study is aimed at construction of the first genetic map for tulip and at the identification of loci associated with resistance to F. oxysporum. A cross-pollinated population of 125 individuals segregating for Fusarium resistance was obtained from Tulipa gesneriana "Kees Nelis" and T. fosteriana "Cantata." Fusarium resistance of the mapping population was evaluated through a soil infection test in two consecutive years, and a spot inoculation test in which a green fluorescent protein tagged Fusarium strain was used for inoculation. The genetic maps have been constructed for the parents separately. The genetic map of "Kees Nelis" comprised 342 markers on 27 linkage groups covering 1707 cM, while the map of "Cantata" comprised 300 markers on 21 linkage groups covering 1201 cM. Median distance between markers was 3.9 cM for "Kees Nelis" and 3.1 cM for "Cantata." Six putative quantitative trait loci (QTLs) for Fusarium resistance were identified, derived from both parents. QTL2, QTL3, and QTL6 were significant in all disease tests. For the flanking markers of the QTLs, phenotypic means of the two allelic groups, segregating from a parent for such a marker, were significantly different. These markers will be useful for the development of MAS in tulip breeding.

  8. Infinitely robust order and local order-parameter tulips in Apollonian networks with quenched disorder

    NASA Astrophysics Data System (ADS)

    Kaplan, C. Nadir; Hinczewski, Michael; Berker, A. Nihat

    2009-06-01

    For a variety of quenched random spin systems on an Apollonian network, including ferromagnetic and antiferromagnetic bond percolation and the Ising spin glass, we find the persistence of ordered phases up to infinite temperature over the entire range of disorder. We develop a renormalization-group technique that yields highly detailed information, including the exact distributions of local magnetizations and local spin-glass order parameters, which turn out to exhibit, as function of temperature, complex and distinctive tulip patterns.

  9. Idea Retrieval.

    ERIC Educational Resources Information Center

    Shively, Daniel

    1988-01-01

    Discusses the need to retrieve ideas in addition to content retrieval by such means as classification, subject headings, and keywords. Three models for idea retrieval are described, and a new model is proposed which combines selection, a controlled vocabulary, and logical structure. (seven references) (CLB)

  10. Isolation and quantification of tuliposides and tulipalins in tulips (Tulipa) by high-performance liquid chromatography.

    PubMed

    Christensen, L P; Kristiansen, K

    1999-06-01

    The content of tuliposides and tulipalins were determined in Tulipa species and cultivars by reversed-phase high-performance liquid chromatography (RP-HPLC), using a water:methanol gradient as mobile phase. The compounds were detected by a diode array detector employed at 208 nm. The investigation revealed, in addition to 1- and 6-tuliposide A, tuliposide D and the lactonized aglycones tulipalin A and (-)-tulipalin B, the new tuliposide F and 6-tuliposide B, the latter being a new acyl derivative of the known 1-tuliposide B. All compounds were isolated by preparative RP-HPLC and identified by NMR and mass spectroscopy. The predominant compounds were 6-tuliposide A and B present in amounts up to 1.5% and 1.3% of fresh weight, respectively. 6-Tuliposide A and tulipalin A seem to be the major allergens in tulips, although tuliposide D and F may also contribute to the allergenic properties. Tulipalin A and (-)-tulipalin B occur in intact tulips and are not only produced in response to fungal attack or after excision of the plants. A few species were found to have very low allergen content and a relatively high level of tuliposide B, indicating it should be possible to breed non-allergenic and disease-resistant tulips.

  11. Interview with Gunther Kress

    ERIC Educational Resources Information Center

    Bearne, Eve

    2005-01-01

    Developments in technology inevitably influence social, cultural, and communicative practices. Dominant language-based practices are giving way to a "new communications landscape" (Kress, 1997, 2003b) which is inherently multimodal. The forms and functions of text are in the process of a radical change which dislodges conventional notions of what…

  12. Characterization of four plasma membrane aquaporins in tulip petals: a putative homolog is regulated by phosphorylation.

    PubMed

    Azad, Abul Kalam; Katsuhara, Maki; Sawa, Yoshihiro; Ishikawa, Takahiro; Shibata, Hitoshi

    2008-08-01

    We suggested previously that temperature-dependent tulip (Tulipa gesneriana) petal movement that is concomitant with water transport is regulated by reversible phosphorylation of an unidentified plasma membrane intrinsic protein (PIP). In this study, four full-length cDNAs of PIPs from tulip petals were identified and cloned. Two PIPs, namely TgPIP1;1 and TgPIP1;2, are members of the PIP1 subfamily, and the remaining two PIPs, namely TgPIP2;1 and TgPIP2;2, belong to the PIP2 subfamily of aquaporins and were named according to the nomenclature of PIP genes in plants. Of these four homologs, only TgPIP2;2 displayed significant water channel activity in the heterologous expression assay using Xenopus laevis oocytes. The water channel activity of this functional isoform was abolished by mercury and was affected by inhibitors of protein kinase and protein phosphatase. Using a site-directed mutagenesis approach to substitute several serine residues with alanine, and assessing water channel activity using the methylotrophic yeast Pichia pastoris expression assay, we showed that Ser35, Ser116 and Ser274 are the putative phosphorylation sites of TgPIP2;2. Real-time reverse transcription-PCR analysis revealed that the transcript levels of TgPIP1;1 and TgPIP1;2 in tulip petals, stems, leaves, bulbs and roots are very low when compared with those of TgPIP2;1 and TgPIP2;2. The transcript level of TgPIP2;1 is negligible in roots, and TgPIP2;2 is ubiquitously expressed in all organs with significant transcript levels. From the data reported herein, we suggest that TgPIP2;2 might be modulated by phosphorylation and dephosphorylation for regulating water channel activity, and may play a role in transcellular water transport in all tulip organs.

  13. Infinitely Robust Order and Local Order-Parameter Tulips in Apollonian Networks with Quenched Disorder

    NASA Astrophysics Data System (ADS)

    Nadir Kaplan, C.; Hinczewski, Michael; Berker, A. Nihat

    2009-03-01

    For a variety of quenched random spin systems on an Apollonian network, including ferromagnetic and antiferromagnetic bond percolation and the Ising spin glass, we find the persistence of ordered phases up to infinite temperature over the entire range of disorder.[1] We develop a renormalization-group technique that yields highly detailed information, including the exact distributions of local magnetizations and local spin-glass order parameters, which turn out to exhibit, as function of temperature, complex and distinctive tulip patterns. [1] C.N. Kaplan, M. Hinczewski, and A.N. Berker, arXiv:0811.3437v1 [cond-mat.dis-nn] (2008).

  14. From Tulip Bulbs to Sub-Prime Mortgages Examining the Sub-Prime Crisis: The Case for a Systemic Approach

    ERIC Educational Resources Information Center

    Stephens, Alan A.; Atwater, J. Brian; Kannan, Vijay R.

    2013-01-01

    Purpose: The collapse of the sub-prime mortgage market parallels several earlier failures within the financial services sector, begging the question why the lessons of past failures were not learned. Throughout history from the tulip bulb crisis of the 1600s to the most recent economic crisis, decision-makers keep making the same mistakes. This…

  15. From Tulip Bulbs to Sub-Prime Mortgages Examining the Sub-Prime Crisis: The Case for a Systemic Approach

    ERIC Educational Resources Information Center

    Stephens, Alan A.; Atwater, J. Brian; Kannan, Vijay R.

    2013-01-01

    Purpose: The collapse of the sub-prime mortgage market parallels several earlier failures within the financial services sector, begging the question why the lessons of past failures were not learned. Throughout history from the tulip bulb crisis of the 1600s to the most recent economic crisis, decision-makers keep making the same mistakes. This…

  16. Carotenoids in floral parts of a narcissus, a daffodil and a tulip

    PubMed Central

    Valadon, L. R. G.; Mummery, Rosemary S.

    1968-01-01

    1. The qualitative and quantitative distribution of carotenoids of the floral parts of three monocotyledons, the narcissus Scarlet Elegance, the daffodil King Alfred and the tulip Golden Harvest, were studied. β-Carotene, lutein or epoxy-β-carotenes were usually the main pigments, depending on the floral part and on the flower. When β-carotene was the major pigment there were only small amounts of, or sometimes no, epoxycarotenes. 2. Anthers, stigmas and styles of the three flowers did not possess any specific carotenoids but in some cases contained appreciable amounts of epoxycarotenoids. The possibility that these take part in reproduction is discussed. 3. The generalization that yellow flowers contained large amounts of xanthophylls and only traces of carotenes, whereas deep-orange flowers seemed to be characterized by the presence of large amounts of one carotene, was not always the correct one. It is suggested that the floral parts are yellow or orange depending on what carotenoids are present, which is the major one and the amount of total carotenoids, and also on the presence of other non-carotenoid pigments. 4. Two new probable isomers of 5,6:5′,6′-diepoxy-β-carotene were isolated and found together in various floral parts of the tulip Golden Harvest. PMID:5637355

  17. Patient-tailored implantable cardioverter defibrillator testing using the upper limit of vulnerability: the TULIP protocol.

    PubMed

    Lemke, Bernd; Lawo, Thomas; Zarse, Markus; Lubinski, Andrzej; Kreutzer, Ulrich; Mueller, Johannes; Schuchert, Andreas; Mitzenheim, Sabine; Danilovic, Dejan; Deneke, Thomas

    2008-08-01

    We evaluated the feasibility of the TULIP (Threshold test using Upper Limit during ImPlantation) protocol, which was designed to provide a confirmed, low defibrillation energy value during implantable cardioverter defibrillator (ICD) implantation with only two induced ventricular fibrillation (VF) episodes. Ninety-eight patients (62 +/- 12 years, 86 male) from 13 clinical centres underwent an active can ICD implantation. A single coupling interval derived from electrocardiogram lead II during ventricular pacing was used for VF induction shocks at 13, 11, 9, and 6 J in a step-down manner until the upper limit of VF induction (ULVI) was determined. If ULVI >or=9 J, a defibrillation energy of ULVI + 4 J was tested. For ULVI <9 J, the defibrillation test energy was 9 J. In 79/98 patients (80.6%), two induced VF episodes were sufficient to obtain confirmed defibrillation energy of 11.1 +/- 3.3 J. The mean strength of the successful VF induction shock was 6.8 +/- 4.3 J, the coupling interval was 303 +/- 35 ms, and the number of delivered induction shocks until the first VF induction was 3.9 +/- 1.6. TULIP is a safe and simple device testing procedure allowing the determination of confirmed, low defibrillation energy in most patients with two VF episodes induced at a single coupling interval.

  18. Low temperature sensing in tulip (Tulipa gesneriana L.) is mediated through an increased response to auxin.

    PubMed

    Rietveld, P L; Wilkinson, C; Franssen, H M; Balk, P A; van der Plas, L H; Weisbeek, P J; Douwe de Boer, A

    2000-03-01

    Tulip (Tulipa gesneriana L.) is a bulbous plant species that requires a period of low temperature for proper growth and flowering. The mechanism of sensing the low temperature period is unknown. The study presented in this paper shows that the essential developmental change in tulip bulbs during cold treatment is an increase in sensitivity to the phytohormone auxin. This is demonstrated using a model system consisting of isolated internodes grown on tissue culture medium containing different combinations of the phytohormones auxin and gibberellin. Using mathematical modelling, equations taken from the field of enzyme kinetics were fitted through the data. By doing so it became apparent that longer periods of low temperature resulted in an increased maximum response at a lower auxin concentration. Besides the cold treatment, gibberellin also enhances the response to auxin in the internodes in this in vitro system. A working model describing the relationship between the cold requirement, gibberellin action and auxin sensitivity is put forward. Possible analogies with other cold-requiring processes such as vernalization and stratification, and the interaction of auxin and gibberellin in the stalk elongation process in other plant species are discussed.

  19. Tulip-form variable-curvature mirrors: interferometry and field compensation

    NASA Astrophysics Data System (ADS)

    Lemaitre, Gerard R.; Mazzanti, Silvio; Ferrari, Marc

    1998-07-01

    Active Optics methods are now capable to provide variable curvature mirrors (VCMs) having controlled sags in the focal range from f/(infinity) to f/2.5. Those development have been carried out by the authors for the optical path equalizer dedicated to each Mersenne focus of the VLTI. The basic principle is to use VCMs as cat's eye mirrors in each delay line in order to achieve field compensations at the recombined Mersenne focii. During the VLTI development phase, cycloid form VCMs controlled by air pressure have been performed with a 10(superscript -4) mirror sag resolution. The cycloid form has been selected for the VLTi delay lines. However, other analytical solutions from circular plates elasticity theory have been found. Two thickness distributions lead to tulip form VCMs controlled by a central force. One of them, using a lineic reaction at the edge is the object of this paper. Active optics design, construction features, test and experimental He-Ne interferograms obtained with 16mm boundary aperture and 10mm clear aperture are presented. The mean aspect-ratio of the tulip from VCM is d/t(subscript 0.5) approximately equals 60, providing a focal zoom range from f/(infinity) to f/2.5. The experiment is carried out form f/(infinity) to f/5.

  20. In-vitro and clinical evaluation of transurethral laser-induced prostatectomy (TULIP)

    NASA Astrophysics Data System (ADS)

    van Swol, Christiaan F. P.; Verdaasdonck, Rudolf M.; Mooibroek, Jaap; Boon, Tom A.

    1993-05-01

    Transurethral ultrasound-guided laser induced prostatectomy (TULIP) is a recent development in the treatment of benign prostatic hyperplasia. The system is based upon Nd:YAG laser irradiation delivered by a right angled fiber. The dosimetry used in a clinical situation is mostly based upon animal studies. In this study, the light and temperature distribution in the prostate during Nd:YAG laser irradiation were modeled using Monte Carlo and finite differences theory. The results of this model were compared with in vitro experiments. The influence of the different parameters involved, e.g., the scanning speed and the power of the laser beam, were evaluated. Initial results show the temperature distribution and thus the therapeutic effect of the TULIP procedure. Until now 36 patients have been treated successfully. The mean in-hospital time was somewhat shorter than for a TURP treatment while the results were comparable. These treatments, however, show the need for a better understanding of the mechanisms involved. Modeling and subsequent in vitro and in vivo measurements might improve the understanding and safe and successful application of prostate treatment using laser based systems.

  1. Tulip-poplar leaf diffusion resistance calculated from stomatal dimensions and varying environmental parameters

    SciTech Connect

    McConathy, R.K.

    1983-03-01

    The study describes the gradients of stomatal size and density in the crown of a mature forest-grown tulip-poplar (Liriodendron tulipifera L.) in eastern Tennessee. These data are used to predict leaf resistance to vapor diffusion in relation to stomatal width and boundary layer resistance. Stomatal density on individual leaves did not vary, but density increased with increasing crown height. Stomatal size decreased with increasing height of leaves within the crown. Stomatal size and density variations interacted to result in a constant number of stomata per leaf at all crown heights. Stomatal diffusive resistance values calculated from stomatal measurements and varying environmental parameters indicated that stomatal resistance controlled transpiration water losses only at small apertures (<0.6 ..mu..m). Boundary layer resistance was controlling at large stomatal apertures (>0.6 ..mu..m) and at low wind speeds (approx.100 cm/s). Under normal forest conditions tulip-poplar stomatal resistance exercised more control over transpiration than did boundary layer resistance.

  2. Molecular diversity of tuliposide A-converting enzyme in the tulip.

    PubMed

    Nomura, Taiji; Tsuchigami, Aya; Ogita, Shinjiro; Kato, Yasuo

    2013-01-01

    Tuliposide A-converting enzyme (TCEA) catalyzes the conversion of 6-tuliposide A to its lactonized aglycon, tulipalin A, in the tulip (Tulipa gesneriana). The TgTCEA gene, isolated previously from petals, was transcribed in all tulip tissues but not in the bulbs despite the presence of TCEA activity, which allowed prediction of the presence of a TgTCEA isozyme gene preferentially expressed in the bulbs. Here, the TgTCEA-b gene, the TgTCEA homolog, was identified in bulbs. TgTCEA-b polypeptides showed approximately 77% identity to the petal TgTCEA. Functional characterization of the recombinant enzyme verified that TgTCEA-b encoded the TCEA. Moreover, the TgTCEA-b was found to be localized to plastids, as found for the petal TgTCEA. Transcript analysis revealed that TgTCEA-b was functionally transcribed in the bulb scales, unlike the TgTCEA gene, whose transcripts were absent there. In contrast, TgTCEA-b transcripts were in the minority in other tissues where TgTCEA transcripts were dominant, indicating a tissue preference for the transcription of those isozyme genes.

  3. Experimental Impeller Fragmentation of Iliocaval Thrombosis Under Tulip Filter Protection: Preliminary Results

    SciTech Connect

    Schmitz-Rode, Thomas; Vorwerk, Dierk; Schuermann, Karl; Guenther, Rolf W.

    1996-04-15

    Purpose: To assess the efficacy of catheter fragmentation of massive caval thrombosis and of filter protection against procedure-related pulmonary embolism. Methods: In 10 sheep, a self-expanding tulip-shaped filter made from Wallstent mesh (diameter 25 mm) was introduced from the right jugular approach into the proximal inferior vena cava. Experimentally induced massive iliocaval thrombosis was fragmented by an impeller catheter (expanded diameter 14 mm), which was advanced coaxially through the sheath of the expanded filter. Post-procedural cavography and pulmonary angiography were performed to document the extent of caval recanalization and pulmonary embolism. Results: In all cases, impeller fragmentation cleared the inferior vena cava and the iliac veins of thrombi completely. Fragments washed downstream were trapped in the filter. In two of the first cases, parts of the clots caused pulmonary embolism before the filter was in place. Further events were avoided by a modification of the experimental setup. Except for some small peripheral perfusion defects in two cases, pulmonary angiograms did not show any incidence of pulmonary embolism. Conclusion: Our preliminary results suggest that impeller fragmentation of iliocaval thrombi under tulip filter protection is effective and does not cause significant pulmonary embolism.

  4. Golden Retrievers.

    ERIC Educational Resources Information Center

    Christensen, Deborah

    1999-01-01

    Provides a basic definition of metadata, including the usefulness of metatags for online information retrieval and documentation. Defines the elements of the Dublin Core, the next level of metadata. Discusses how librarians can take advantage of metadata. Describes the Gateway to Educational Materials (GEM) Project whose goal is to use metadata to…

  5. Information Retrieval.

    ERIC Educational Resources Information Center

    National Archives and Records Service (GSA), Washington, DC. Office of the National Archives.

    It is the purpose of this handbook to provide managers and their assistants with guidelines for determining where new information processing systems (dissemination, storage and retrieval) might profitably be employed in Government offices and with criteria for selecting the right methods and equipment. While the main objective is to encourage…

  6. Neoseiulus paspalivorus, a predator from coconut, as a candidate for controlling dry bulb mites infesting stored tulip bulbs.

    PubMed

    Lesna, Izabela; da Silva, Fernando R; Sato, Yukie; Sabelis, Maurice W; Lommen, Suzanne T E

    2014-06-01

    The dry bulb mite, Aceria tulipae, is the most important pest of stored tulip bulbs in The Netherlands. This tiny, eriophyoid mite hides in the narrow space between scales in the interior of the bulb. To achieve biological control of this hidden pest, candidate predators small enough to move in between the bulb scales are required. Earlier experiments have shown this potential for the phytoseiid mite, Neoseiulus cucumeris, but only after the bulbs were exposed to ethylene, a plant hormone that causes a slight increase in the distance between tulip bulb scales, just sufficient to allow this predator to reach the interior part of the bulb. Applying ethylene, however, is not an option in practice because it causes malformation of tulip flowers. In fact, to prevent this cosmetic damage, bulb growers ventilate rooms where tulip bulbs are stored, thereby removing ethylene produced by the bulbs (e.g. in response to mite or fungus infestation). Recently, studies on the role of predatory mites in controlling another eriophyoid mite on coconuts led to the discovery of an exceptionally small phytoseiid mite, Neoseiulus paspalivorus. This predator is able to move under the perianth of coconuts where coconut mites feed on meristematic tissue of the fruit. This discovery prompted us to test N. paspalivorus for its ability to control A. tulipae on tulip bulbs under storage conditions (ventilated rooms with bulbs in open boxes; 23 °C; storage period June-October). Using destructive sampling we monitored predator and prey populations in two series of replicated experiments, one at a high initial level of dry bulb mite infestation, late in the storage period, and another at a low initial dry bulb mite infestation, halfway the storage period. The first and the second series involved treatment with N. paspalivorus and a control experiment, but the second series had an additional treatment in which the predator N. cucumeris was released. Taking the two series of experiments together

  7. Impact of bleaching on subcritical water- and Formosolv-pretreated tulip tree to enhance enzyme accessibility.

    PubMed

    Myint, Aye Aye; Kim, Dae Sung; Lee, Hun Wook; Yoon, Junho; Choi, In-Gyu; Choi, Joon Weon; Lee, Youn-Woo

    2013-10-01

    A novel method was developed for fractionating cellulose microfibrils from forest residue (tulip tree sawdust) to enhance cellulose digestibility, particularly at minimum enzyme loadings. This method involved three main stages: selective hemicellulose solubilization by subcritical water (SCW) pretreatment, delignification of the SCW-pretreated solids using the Formosolv process, and deformylation/bleaching of the cellulose pulp with alkaline hydrogen peroxide solution. This process produced nearly 98% white cellulose microfibrils with 23-fold higher conversion to glucose as compared to the raw substrate after 72 h of enzymatic hydrolysis. This study showed that cellulose swelling had the greatest effect on the enzymatic hydrolysis efficiency of delignified pulp obtained by the Formosolv process. Copyright © 2013 Elsevier Ltd. All rights reserved.

  8. New trichoscopy findings in trichotillomania: flame hairs, V-sign, hook hairs, hair powder, tulip hairs.

    PubMed

    Rakowska, Adriana; Slowinska, Monika; Olszewska, Malgorzata; Rudnicka, Lidia

    2014-05-01

    Differential diagnosis of trichotillomania is often difficult in clinical practice. Trichoscopy (hair and scalp dermoscopy) effectively supports differential diagnosis of various hair and scalp diseases. The aim of this study was to assess the usefulness of trichoscopy in diagnosing trichotillomania. The study included 370 patients (44 with trichotillomania, 314 with alopecia areata and 12 with tinea capitis). Statistical analysis revealed that the main and most characteristic trichoscopic findings of trichotillomania are: irregularly broken hairs (44/44; 100% of patients), v-sign (24/44; 57%), flame hairs (11/44; 25%), hair powder (7/44; 16%) and coiled hairs (17/44; 39%). Flame hairs, v-sign, tulip hairs, and hair powder were newly identified in this study. In conclusion, we describe here specific trichoscopy features, which may be applied in quick, non-invasive, in-office differential diagnosis of trichotillomania.

  9. Function and application of a non-ester-hydrolyzing carboxylesterase discovered in tulip.

    PubMed

    Nomura, Taiji

    2017-01-01

    Plants have evolved secondary metabolite biosynthetic pathways of immense rich diversity. The genes encoding enzymes for secondary metabolite biosynthesis have evolved through gene duplication followed by neofunctionalization, thereby generating functional diversity. Emerging evidence demonstrates that some of those enzymes catalyze reactions entirely different from those usually catalyzed by other members of the same family; e.g. transacylation catalyzed by an enzyme similar to a hydrolytic enzyme. Tuliposide-converting enzyme (TCE), which we recently discovered from tulip, catalyzes the conversion of major defensive secondary metabolites, tuliposides, to antimicrobial tulipalins. The TCEs belong to the carboxylesterase family in the α/β-hydrolase fold superfamily, and specifically catalyze intramolecular transesterification, but not hydrolysis. This non-ester-hydrolyzing carboxylesterase is an example of an enzyme showing catalytic properties that are unpredictable from its primary structure. This review describes the biochemical and physiological aspects of tulipalin biogenesis, and the diverse functions of plant carboxylesterases in the α/β-hydrolase fold superfamily.

  10. Asymmetric total synthesis of 6-Tuliposide B and its biological activities against tulip pathogenic fungi.

    PubMed

    Shigetomi, Kengo; Omoto, Shoko; Kato, Yasuo; Ubukata, Makoto

    2011-01-01

    The structure-activity relationship was investigated to evaluate the antifungal activities of tuliposides and tulipalins against tulip pathogenic fungi. 6-Tuliposide B was effectively synthesized via the asymmetric Baylis-Hillman reaction. Tuliposides and tulipalins showed antifungal activities against most of the strains tested at high concentrations (2.5 mM), while Botrytis tulipae was resistant to tuliposides. Tulipalin formation was involved in the antifungal activity, tulipalin A showed higher inhibitory activity than 6-tuliposide B and tulipalin B. Both the tuliposides and tulipalins showed pigment-inducing activity against Gibberella zeae and inhibitory activity against Fusarium oxysporum f. sp tulipae. These activities were induced at a much lower concentration (0.05 mM) than the antifungal MIC values.

  11. A force transmission system based on a tulip-shaped electrostatic clutch for haptic display devices

    NASA Astrophysics Data System (ADS)

    Sasaki, Hikaru; Shikida, Mitsuhiro; Sato, Kazuo

    2006-12-01

    This paper describes a novel type of force transmission system for haptic display devices. The system consists of an array of end-effecter elements, a force/displacement transmitter and a single actuator producing a large force/displacement. It has tulip-shaped electrostatic clutch devices to distribute the force/displacement from the actuator among the individual end effecters. The specifications of three components were determined to stimulate touched human fingers. The components were fabricated by using micro-electromechanical systems and conventional machining technologies, and finally they were assembled by hand. The performance of the assembled transmission system was experimentally examined and it was confirmed that each projection in the arrayed end effecters could be moved individually. The actuator in a system whose total size was only 3.0 cm × 3.0 cm × 4.0 cm produced a 600 mN force and displaced individual array elements by 18 µm.

  12. Liberty Bell 7 is retrieved from Atlantic Ocean

    NASA Technical Reports Server (NTRS)

    1999-01-01

    Gunther Wendt takes a turn at the podium after viewing the recovered Liberty Bell 7 Project Mercury capsule, seen in the background. At right is Curt Newport who led the expedition to find and retrieve the capsule. The expedition was sponsored by the Discovery Channel. Wendt worked on the Liberty Bell 7 before its launch July 21, 1961. After its successful 16-minute suborbital flight, the Liberty Bell 7, with astronaut Virgil 'Gus' Grissom aboard, splashed down in the Atlantic Ocean. A prematurely jettisoned hatch caused the capsule to flood and a Marine rescue helicopter was unable to lift it. It quickly sank to a three-mile depth. Grissom was rescued but his spacecraft remained lost on the ocean floor, until now. An underwater salvage expert, Newport located the capsule through modern technology, and after one abortive attempt, successfully raised it and brought it to Port Canaveral. The recovery of Liberty Bell 7 fulfilled a 14-year dream for the expedition leader. The capsule is being moved to the Kansas Cosmosphere and Space Center in Hutchinson, Kansas, where it will be restored for eventual public display. Newport has also been involved in salvage operations of the Space Shuttle Challenger and TWA Flight 800 that crashed off the coast of Long Island, N.Y.

  13. Liberty Bell 7 is retrieved from Atlantic Ocean

    NASA Technical Reports Server (NTRS)

    1999-01-01

    Gunther Wendt takes a turn at the podium after viewing the recovered Liberty Bell 7 Project Mercury capsule, seen in the background. At right is Curt Newport who led the expedition to find and retrieve the capsule. The expedition was sponsored by the Discovery Channel. Wendt worked on the Liberty Bell 7 before its launch July 21, 1961. After its successful 16-minute suborbital flight, the Liberty Bell 7, with astronaut Virgil 'Gus' Grissom aboard, splashed down in the Atlantic Ocean. A prematurely jettisoned hatch caused the capsule to flood and a Marine rescue helicopter was unable to lift it. It quickly sank to a three-mile depth. Grissom was rescued but his spacecraft remained lost on the ocean floor, until now. An underwater salvage expert, Newport located the capsule through modern technology, and after one abortive attempt, successfully raised it and brought it to Port Canaveral. The recovery of Liberty Bell 7 fulfilled a 14-year dream for the expedition leader. The capsule is being moved to the Kansas Cosmosphere and Space Center in Hutchinson, Kansas, where it will be restored for eventual public display. Newport has also been involved in salvage operations of the Space Shuttle Challenger and TWA Flight 800 that crashed off the coast of Long Island, N.Y.

  14. The lipoxygenase pathway in tulip (Tulipa gesneriana): detection of the ketol route.

    PubMed

    Grechkin, A N; Mukhtarova, L S; Hamberg, M

    2000-12-01

    The in vitro metabolism of [1-(14)C]linoleate, [1-(14)C]linolenate and their 9(S)-hydroperoxides was studied in cell-free preparations from tulip (Tulipa gesneriana) bulbs, leaves and flowers. Linoleate and its 9-hydroperoxide were converted by bulb and leaf preparations into three ketols: (12Z)-9-hydroxy-10-oxo-12-octadecadienoic acid (alpha-ketol), (11E)-10-oxo-13-hydroxy-11-octadecadienoic acid (gamma-ketol) and a novel compound, (12Z)-10-oxo-11-hydroxy-12-octadecadienoic acid (10,11-ketol), in the approximate molar proportions of 10:3:1. The corresponding 15, 16-dehydro alpha- and gamma-ketols were the main metabolites of [1-(14)C]linolenate and its 9-hydroperoxide. Thus bulbs and leaves possessed 9-lipoxygenase and allene oxide synthase activities. Incubations with flower preparations gave alpha-ketol hydro(pero)xides as predominant metabolites. Bulb and leaf preparations possessed a novel enzyme activity, gamma-ketol reductase, which reduces gamma-ketol to 10-oxo-13-hydroxyoctadecanoic acid (dihydro-gamma-ketol) in the presence of NADH. Exogenous linolenate 13(S)-hydroperoxide was converted mostly into chiral (9S,13S)-12-oxo-10-phytodienoate (99.5% optical purity) by bulb preparations, while [1-(14)C]linolenate was a precursor for ketols only. Thus tulip bulbs possess abundant allene oxide cyclase activity, the substrate for which is linolenate 13(S)-hydroperoxide, even though 13(S)-lipoxygenase products were not detectable in the bulbs. The majority of the cyclase activity was found in the microsomes (10(5) g pellet). Cyclase activity was not found in the other tissues examined, but only in the bulbs. The ketol route of the lipoxygenase pathway, mediated by 9-lipoxygenase and allene oxide synthase activities, has not been detected previously in the vegetative organs of any plant species.

  15. The lipoxygenase pathway in tulip (Tulipa gesneriana): detection of the ketol route.

    PubMed Central

    Grechkin, A N; Mukhtarova, L S; Hamberg, M

    2000-01-01

    The in vitro metabolism of [1-(14)C]linoleate, [1-(14)C]linolenate and their 9(S)-hydroperoxides was studied in cell-free preparations from tulip (Tulipa gesneriana) bulbs, leaves and flowers. Linoleate and its 9-hydroperoxide were converted by bulb and leaf preparations into three ketols: (12Z)-9-hydroxy-10-oxo-12-octadecadienoic acid (alpha-ketol), (11E)-10-oxo-13-hydroxy-11-octadecadienoic acid (gamma-ketol) and a novel compound, (12Z)-10-oxo-11-hydroxy-12-octadecadienoic acid (10,11-ketol), in the approximate molar proportions of 10:3:1. The corresponding 15, 16-dehydro alpha- and gamma-ketols were the main metabolites of [1-(14)C]linolenate and its 9-hydroperoxide. Thus bulbs and leaves possessed 9-lipoxygenase and allene oxide synthase activities. Incubations with flower preparations gave alpha-ketol hydro(pero)xides as predominant metabolites. Bulb and leaf preparations possessed a novel enzyme activity, gamma-ketol reductase, which reduces gamma-ketol to 10-oxo-13-hydroxyoctadecanoic acid (dihydro-gamma-ketol) in the presence of NADH. Exogenous linolenate 13(S)-hydroperoxide was converted mostly into chiral (9S,13S)-12-oxo-10-phytodienoate (99.5% optical purity) by bulb preparations, while [1-(14)C]linolenate was a precursor for ketols only. Thus tulip bulbs possess abundant allene oxide cyclase activity, the substrate for which is linolenate 13(S)-hydroperoxide, even though 13(S)-lipoxygenase products were not detectable in the bulbs. The majority of the cyclase activity was found in the microsomes (10(5) g pellet). Cyclase activity was not found in the other tissues examined, but only in the bulbs. The ketol route of the lipoxygenase pathway, mediated by 9-lipoxygenase and allene oxide synthase activities, has not been detected previously in the vegetative organs of any plant species. PMID:11085944

  16. A novel lactone-forming carboxylesterase: molecular identification of a tuliposide A-converting enzyme in tulip.

    PubMed

    Nomura, Taiji; Ogita, Shinjiro; Kato, Yasuo

    2012-06-01

    Tuliposides, the glucose esters of 4-hydroxy-2-methylenebutanoate and 3,4-dihydroxy-2-methylenebutanoate, are major secondary metabolites in tulip (Tulipa gesneriana). Their lactonized aglycons, tulipalins, function as defensive chemicals due to their biological activities. We recently found that tuliposide-converting enzyme (TCE) purified from tulip bulbs catalyzed the conversion of tuliposides to tulipalins, but the possibility of the presence of several TCE isozymes was raised: TCE in tissues other than bulbs is different from bulb TCE. Here, to prove this hypothesis, TCE was purified from petals, which have the second highest TCE activity after bulbs. The purified enzyme, like the bulb enzyme, preferentially accepted tuliposides as substrates, with 6-tuliposide A the best substrate, which allowed naming the enzyme tuliposide A-converting enzyme (TCEA), but specific activity and molecular mass differed between the petal and bulb enzymes. After peptide sequencing, a novel cDNA (TgTCEA) encoding petal TCEA was isolated, and the functional characterization of the recombinant enzyme verified that TgTCEA catalyzes the conversion of 6-tuliposide A to tulipalin A. TgTCEA was transcribed in all tulip tissues but not in bulbs, indicating the presence of a bulb-specific TgTCEA, as suggested by the distinct enzymatic characters between the petal and bulb enzymes. Plastidial localization of TgTCEA enzyme was revealed, which allowed proposing a cytological mechanism of TgTCE-mediated tulipalin formation in the tulip defensive strategy. Site-directed mutagenesis of TgTCEA suggested that the oxyanion hole and catalytic triad characteristic of typical carboxylesterases are essential for the catalytic process of TgTCEA enzyme. To our knowledge, TgTCEA is the first identified member of the lactone-forming carboxylesterases, specifically catalyzing intramolecular transesterification.

  17. A Novel Lactone-Forming Carboxylesterase: Molecular Identification of a Tuliposide A-Converting Enzyme in Tulip1[W

    PubMed Central

    Nomura, Taiji; Ogita, Shinjiro; Kato, Yasuo

    2012-01-01

    Tuliposides, the glucose esters of 4-hydroxy-2-methylenebutanoate and 3,4-dihydroxy-2-methylenebutanoate, are major secondary metabolites in tulip (Tulipa gesneriana). Their lactonized aglycons, tulipalins, function as defensive chemicals due to their biological activities. We recently found that tuliposide-converting enzyme (TCE) purified from tulip bulbs catalyzed the conversion of tuliposides to tulipalins, but the possibility of the presence of several TCE isozymes was raised: TCE in tissues other than bulbs is different from bulb TCE. Here, to prove this hypothesis, TCE was purified from petals, which have the second highest TCE activity after bulbs. The purified enzyme, like the bulb enzyme, preferentially accepted tuliposides as substrates, with 6-tuliposide A the best substrate, which allowed naming the enzyme tuliposide A-converting enzyme (TCEA), but specific activity and molecular mass differed between the petal and bulb enzymes. After peptide sequencing, a novel cDNA (TgTCEA) encoding petal TCEA was isolated, and the functional characterization of the recombinant enzyme verified that TgTCEA catalyzes the conversion of 6-tuliposide A to tulipalin A. TgTCEA was transcribed in all tulip tissues but not in bulbs, indicating the presence of a bulb-specific TgTCEA, as suggested by the distinct enzymatic characters between the petal and bulb enzymes. Plastidial localization of TgTCEA enzyme was revealed, which allowed proposing a cytological mechanism of TgTCE-mediated tulipalin formation in the tulip defensive strategy. Site-directed mutagenesis of TgTCEA suggested that the oxyanion hole and catalytic triad characteristic of typical carboxylesterases are essential for the catalytic process of TgTCEA enzyme. To our knowledge, TgTCEA is the first identified member of the lactone-forming carboxylesterases, specifically catalyzing intramolecular transesterification. PMID:22474185

  18. Environmentally benign process for the preparation of antimicrobial α-methylene-β-hydroxy-γ-butyrolactone (tulipalin B) from tulip biomass.

    PubMed

    Nomura, Taiji; Hayashi, Emiko; Kawakami, Shohei; Ogita, Shinjiro; Kato, Yasuo

    2015-01-01

    Tulipalin B (α-methylene-β-hydroxy-γ-butyrolactone, PaB) is an antimicrobial natural product occurring in tulip (Tulipa gesneriana). PaB is directly formed from the precursor glucose ester 6-tuliposide B (PosB) by endogenous Pos-converting enzyme (TCE). Despite the potential usefulness of antibacterial PaB in various industrial applications, lack of facile synthetic schemes hampers its practical use. Herein, we describe an environmentally benign and facile process for the preparation of PaB using tulip biomass materials based on one-step enzyme reaction catalyzed by TCE without the use of petroleum-derived solvents. By screening 115 tulip cultivars, we found three elite cultivars, which accumulated PosB almost exclusively in flower tissues. The flower extracts with aqueous ethanol were partially purified with activated charcoal and subjected to the enzyme reaction with reusable immobilized TCE prepared from bulb crude extracts. The reaction was completed in a few hours at room temperature, and PaB was purified with activated charcoal and ethanol in a batch-wise manner.

  19. Molecular diversity of tuliposide B-converting enzyme in tulip (Tulipa gesneriana): identification of the root-specific isozyme.

    PubMed

    Nomura, Taiji; Ueno, Ayaka; Ogita, Shinjiro; Kato, Yasuo

    2017-06-01

    6-Tuliposide B (PosB) is a glucose ester accumulated in tulip (Tulipa gesneriana) as a major secondary metabolite. PosB serves as the precursor of the antimicrobial lactone tulipalin B (PaB), which is formed by PosB-converting enzyme (TCEB). The gene TgTCEB1, encoding a TCEB, is transcribed in tulip pollen but scarcely transcribed in other tissues (e.g. roots) even though those tissues show high TCEB activity. This led to the prediction of the presence of a TCEB isozyme with distinct tissue specificity. Herein, we describe the identification of the TgTCEB-R gene from roots via native enzyme purification; this gene is a paralog of TgTCEB1. Recombinant enzyme characterization verified that TgTCEB-R encodes a TCEB. Moreover, TgTCEB-R was localized in tulip plastids, as found for pollen TgTCEB1. TgTCEB-R is transcribed almost exclusively in roots, indicating a tissue preference for the transcription of TCEB isozyme genes.

  20. Interaction of a flame front with its self-generated flow in an enclosure; The tulip flame phenomenon

    SciTech Connect

    Gonzalez, M.; Borghi, R.; Saouab, A. )

    1992-02-01

    This paper reports on the propagation of a flame front under nonturbulent condition in a closed tube ignited at one end which is numerically investigated using a computing procedure based on finite volumes technique and devoted to two-dimensional, compressible, reacting flows. A global one-step reaction for the chemical process and an Arrhenius law for fuel consumption are assumed. The detailed analysis of the results of computations in which wall friction, tube aspect ratio and initial flame configuration are varied allows to highlight the influence of different parameters and to get more insight into the tulip-shaped flame phenomenon. In particular, Darrieus-landau instability is examined by comparing the shape variations of an initially perturbed flat front in a tube closed at both ends to those in a tube in which the ignition end is open while the opposite one is closed. Attention is also given to the computed flame generated flowfield; the flame front-confined flow interaction is specially scrutinized. Furthermore, the oscillatory acoustic regime occurring during tulip flame appearance, as well as the collapse of the tulip shape in tubes of large aspect ratio, already experimentally put into evidence but never numerically addressed, have also been simulated and discussed.

  1. The Tulip GT® airway versus the facemask and Guedel airway: a randomised, controlled, cross-over study by Basic Life Support-trained airway providers in anaesthetised patients.

    PubMed

    Shaikh, A; Robinson, P N; Hasan, M

    2016-03-01

    We performed a randomised, controlled, cross-over study of lung ventilation by Basic Life Support-trained providers using either the Tulip GT® airway or a facemask with a Guedel airway in 60 anaesthetised patients. Successful ventilation was achieved if the provider produced an end-tidal CO2 > 3.5 kPa and a tidal volume > 250 ml in two of the first three breaths, within 60 sec and within two attempts. Fifty-seven (95%) providers achieved successful ventilation using the Tulip GT compared with 35 (58%) using the facemask (p < 0.0001). Comparing the Tulip GT and facemask, the mean (SD) end-tidal CO2 was 5.0 (0.7) kPa vs 2.5 (1.5) kPa, tidal volume was 494 (175) ml vs 286 (186) ml and peak inspiratory pressure was 18.3 (3.4) cmH2 O vs 13.6 (7) cmH2 O respectively (all p < 0.0001). Forty-seven (78%) users favoured the Tulip GT airway. These results are similar to a previous manikin study using the same protocol, suggesting a close correlation between human and manikin studies for this airway device. We conclude that the Tulip GT should be considered as an adjunct to airway management both within and outside hospitals when ventilation is being undertaken by Basic Life Support-trained airway providers. © 2015 The Association of Anaesthetists of Great Britain and Ireland.

  2. [Animal nutrition for veterinarians--actual cases: tulip bulbs with leaves (Tulipa gesneriana)--an unusual and high risk plant for ruminant feeding].

    PubMed

    Wolf, P; Blanke, H J; Wohlsein, P; Kamphues, J; Stöber, M

    2003-07-01

    14 cattle (mainly younger ones) of a total of 50 extensively kept Galloways died within 6 weeks in late winter 2001/02. According to the owner's report, grass growth had been rather poor; therefore, the herd was fed additionally hay as well as large amounts of tulip onions. In the microbiological examination a highly reduced hygienic quality of the roughage could be detected. In the rumen contents of two dissected young cattle parts of tulip onions were found. According to pertinent literature, tulip onions (in particular their external layers) contain variant-specific amounts of anti-nutritive substances; main active agents are tulipin (a glycoprotein), tuliposid A and B, and lectins. They may cause intensive mucosal irritation, accompanied by reduced feed digestion and body-weight gains, drooling, vomiting and diarrhea. This case report underlines risks caused by feeding of plants originally not destined as forage, if their active ingredients and effects are unknown or remain unconsidered.

  3. Complications of Celect, Günther tulip, and Greenfield inferior vena cava filters on CT follow-up: a single-institution experience.

    PubMed

    McLoney, Eric D; Krishnasamy, Venkatesh P; Castle, Jordan C; Yang, Xiangyu; Guy, Gregory

    2013-11-01

    To evaluate and compare the rates of complications on follow-up computed tomography (CT) studies of patients with Celect, Günther Tulip, and Greenfield inferior vena cava (IVC) filters. Retrospective review of CT studies obtained 0-1,987 days after infrarenal placement of an IVC filter identified 255 Celect, 160 Tulip, and 50 Greenfield filters. Follow-up CT studies were independently evaluated by two observers for IVC perforation, contact with adjacent organs, and filter fracture. Multivariate analysis was performed to identify factors associated with higher rates of IVC perforation, including age, IVC diameter, sex, and history of malignancy. IVC perforation was observed in 126 of 255 Celect filters (49%) with a mean follow-up of 277 days, 69 of 160 Tulip filters (43%) with a mean follow-up of 437 days, and one of 50 Greenfield filters (2%) with a mean follow-up of 286 days. A significantly higher IVC perforation rate was observed in women (45.5%) compared with men (30.8%; P = .002) and in patients with a history of malignancy (43.7%) compared with patients with no history of malignancy (29.9%; P < .001). Filter fracture was rare, observed in two of 255 Celect filters (0.8%), one of 160 Tulip filters (0.6%), and none of 50 Greenfield filters. No significant difference was observed in IVC perforation rate between Celect and Tulip filters. Greenfield filters had a significantly lower rate of IVC perforation than Celect and Tulip filters. Higher IVC perforation rates were observed in women and patients with a history of malignancy. © SIR, 2013.

  4. Phloem Loading in the Tulip Tree. Mechanisms and Evolutionary Implications1

    PubMed Central

    Goggin, Fiona L.; Medville, Richard; Turgeon, Robert

    2001-01-01

    Minor vein ultrastructure and phloem loading were studied in leaves of the tulip tree (Liriodendron tulipifera; Magnoliaceae). Plasmodesmatal frequencies leading into minor vein companion cells are higher than in species known to load via the apoplast. However, these companion cells are not specialized as “intermediary cells” as they are in species in which the best evidence for symplastic phloem loading has been documented. Mesophyll cells plasmolyzed in 600 mm sorbitol, whereas sieve elements and companion cells did not plasmolyze even in 1.2 m sorbitol, indicating that solute accumulates in the phloem against a steep concentration gradient. Both [14C]sucrose and 14C-labeled photo-assimilate accumulated in the minor vein network, as demonstrated by autoradiography. [14C]sucrose accumulation was prevented by p-chloromercuribenzenesulfonic acid, an inhibitor of sucrose-proton cotransport from the apoplast. p-Chloromercuribenzenesulfonic acid largely, but not entirely, inhibited exudation of radiolabeled photoassimilate. The evidence is most consistent with the presence of an apoplastic component to phloem loading in this species, contrary to speculation that the more basal members of the angiosperms load by an entirely symplastic mechanism. PMID:11161046

  5. Evaluation of hot compressed water pretreatment and enzymatic saccharification of tulip tree sawdust using severity factors.

    PubMed

    Kim, Dae Sung; Myint, Aye Aye; Lee, Hun Wook; Yoon, Junho; Lee, Youn-Woo

    2013-09-01

    Tulip tree sawdust was pretreated using hot compressed water with different pretreatment severities (LogR0, 3.05-5.01) by varying reaction temperatures (180-220°C) and residence time (1-30 min). It is found that the chemical composition and physicochemical properties of the pretreated products can be characterized and correlated with severity. Removal of most of the xylan and other hemicellulosic sugars from the raw material was observed at a severity of 4.5. Thus, the residual solids were recovered with increased cellulose and lignin contents. Nearly complete glucan conversion was achieved after 48 h of hydrolysis with 10 FPU/g of wet residual solid obtained above a severity of 4.8. The characteristics of the pretreated solids according to the pretreatment severity were strongly related with the glucose yield. The removal of structural barriers to the enzyme attack was the dominant factor affecting enzyme accessibility to the substrate. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Intracellular energy depletion triggers programmed cell death during petal senescence in tulip.

    PubMed

    Azad, A K; Ishikawa, Takayuki; Ishikawa, Takahiro; Sawa, Y; Shibata, H

    2008-01-01

    Programmed cell death (PCD) in petals provides a model system to study the molecular aspects of organ senescence. In this study, the very early triggering signal for PCD during the senescence process from young green buds to 14-d-old petals of Tulipa gesneriana was determined. The opening and closing movement of petals of intact plants increased for the first 3 d and then gradually decreased. DNA degradation and cytochrome c (Cyt c) release were clearly observed in 6-d-old flowers. Oxidative stress or ethylene production can be excluded as the early signal for petal PCD. In contrast, ATP was dramatically depleted after the first day of flower opening. Sucrose supplementation to cut flowers maintained their ATP levels and the movement ability for a longer time than in those kept in water. The onset of DNA degradation, Cyt c release, and petal senescence was also delayed by sucrose supplementation to cut flowers. These results suggest that intracellular energy depletion, rather than oxidative stress or ethylene production, may be the very early signal to trigger PCD in tulip petals.

  7. Heterologous Expression of Tulip Petal Plasma Membrane Aquaporins in Pichia pastoris for Water Channel Analysis▿

    PubMed Central

    Azad, Abul Kalam; Sawa, Yoshihiro; Ishikawa, Takahiro; Shibata, Hitoshi

    2009-01-01

    Water channels formed by aquaporins (AQPs) play an important role in the control of water homeostasis in individual cells and in multicellular organisms. Plasma membrane intrinsic proteins (PIPs) constitute a subclass of plant AQPs. TgPIP2;1 and TgPIP2;2 from tulip petals are members of the PIP family. In this study, we overexpressed TgPIP2;1 and TgPIP2;2 in Pichia pastoris and monitored their water channel activity (WCA) either by an in vivo spheroplast-bursting assay performed after hypo-osmotic shock or by growth assay. Osmolarity, pH, and inhibitors of AQPs, protein kinases (PKs), and protein phosphatases (PPs) affect the WCA of heterologous AQPs in this expression system. The WCA of TgPIP2;2-expressing spheroplasts was affected by inhibitors of PKs and PPs, which indicates that the water channel of this homologue is regulated by phosphorylation in P. pastoris. From the results reported herein, we suggest that P. pastoris can be employed as a heterologous expression system to assay the WCA of PIPs and to monitor the AQP-mediated channel gating mechanism, and it can be developed to screen inhibitors/effectors of PIPs. PMID:19251885

  8. Perianth bottom-specific blue color development in Tulip cv. Murasakizuisho requires ferric ions.

    PubMed

    Shoji, Kazuaki; Miki, Naoko; Nakajima, Noriyuki; Momonoi, Kazumi; Kato, Chiharu; Yoshida, Kumi

    2007-02-01

    The entire flower of Tulipa gesneriana cv. Murasakizuisho is purple, except the bottom, which is blue. To elucidate the mechanism of the different color development in the same petal, we prepared protoplasts from the purple and blue epidermal regions and measured the flavonoid composition by HPLC, the vacuolar pH by a proton-selective microelectrode, and element contents by the inductively coupled plasma (ICP) method. Chemical analyses revealed that the anthocyanin and flavonol compositions in both purple and blue colored protoplasts were the same; delphinidin 3-O-rutinoside (1) and major three flavonol glycosides, manghaslin (2), rutin (3) and mauritianin (4). The vacuolar pH values of the purple and blue protoplasts were 5.5 and 5.6, respectively, without any significant difference. However, the Fe(3+) content in the blue protoplast was approximately 9.5 mM, which was 25 times higher than that in the purple protoplasts. We could reproduce the purple solution by mixing 1 with two equimolar concentrations of flavonol with lambda(vismax) = 539 nm, which was identical to that of the purple protoplasts. Furthermore, addition of Fe(3+) to the mixture of 1-4 gave the blue solution with lambda(vismax) = 615 nm identical to that of the blue protoplasts. We have established that Fe(3+) is essential for blue color development in the tulip.

  9. Carbohydrate Status of Tulip Bulbs during Cold-Induced Flower Stalk Elongation and Flowering.

    PubMed Central

    Lambrechts, H.; Rook, F.; Kolloffel, C.

    1994-01-01

    The effect of a cold treatment on the carbohydrate status of the scales and flower stalk of Tulipa gesneriana L. cv Apeldoorn bulbs during growth after planting was studied and compared with bulbs not given cold treatment. Bulbs were stored dry for 12 weeks at 5[deg]C (precooled) or 17[deg]C (noncooled). Only the 5[deg]C treatment led to rapid flower stalk elongation and flowering following planting at higher temperatures. Precooling enhanced mobilization of starch, fructans, and sucrose in the scales. The cold-stimulated starch breakdown was initially accompanied by increased [alpha]-amylase activity per scale. In noncooled bulbs, [alpha]-amylase activity slightly decreased or remained more or less constant. Cold-induced flower stalk elongation was partially accompanied by a decrease in the sucrose content and an increase in the glucose content and invertase activity per g dry weight. The starch content in internodes initially decreased and subsequently increased; [alpha]-amylase activity per g dry weight of the lowermost internode showed a peak pattern during starch breakdown and increased thereafter. The internodes of noncooled bulbs, on the contrary, accumulated sucrose. Their glucose content and invertase activity per g dry weight remained low. Starch breakdown was not found and [alpha]-amylase activity per g dry weight of the lowermost internode remained at a low level. Precooling of tulip bulbs thus favors reserve mobilization in the scales and flower stalk and glucose accumulation in the elongating internodes. PMID:12232100

  10. Purification and characterization of protein phosphatase 2A from petals of the tulip Tulipa gesnerina.

    PubMed

    Azad, Md Abul Kalam; Sawa, Yoshihiro; Ishikawa, Takahiro; Shibata, Hitoshi

    2006-11-30

    The holoenzyme of protein phosphatase (PP) from tulip petals was purified by using hydrophobic interaction, anion exchange and microcystin affinity chromatography to analyze activity towards p-nitrophenyl phosphate (p-NPP). The catalytic subunit of PP was released from its endogenous regulatory subunits by ethanol precipitation and further purified. Both preparations were characterized by immunological and biochemical approaches to be PP2A. On SDS-PAGE, the final purified holoenzyme preparation showed three protein bands estimated at 38, 65, and 75 kDa while the free catalytic subunit preparation showed only the 38 kDa protein. In both preparations, the 38 kDa protein was identified immunologically as the catalytic subunit of PP2A by using a monoclonal antibody against the PP2A catalytic subunit. The final 623- and 748- fold purified holoenzyme and the free catalytic preparations, respectively, exhibited high sensitivity to inhibition by 1 nM okadaic acid when activity was measured with p-NPP. The holoenzyme displayed higher stimulation in the presence of ammonium sulfate than the free catalytic subunit did by protamine, thereby suggesting different enzymatic behaviors.

  11. Heterologous expression of tulip petal plasma membrane aquaporins in Pichia pastoris for water channel analysis.

    PubMed

    Azad, Abul Kalam; Sawa, Yoshihiro; Ishikawa, Takahiro; Shibata, Hitoshi

    2009-05-01

    Water channels formed by aquaporins (AQPs) play an important role in the control of water homeostasis in individual cells and in multicellular organisms. Plasma membrane intrinsic proteins (PIPs) constitute a subclass of plant AQPs. TgPIP2;1 and TgPIP2;2 from tulip petals are members of the PIP family. In this study, we overexpressed TgPIP2;1 and TgPIP2;2 in Pichia pastoris and monitored their water channel activity (WCA) either by an in vivo spheroplast-bursting assay performed after hypo-osmotic shock or by growth assay. Osmolarity, pH, and inhibitors of AQPs, protein kinases (PKs), and protein phosphatases (PPs) affect the WCA of heterologous AQPs in this expression system. The WCA of TgPIP2;2-expressing spheroplasts was affected by inhibitors of PKs and PPs, which indicates that the water channel of this homologue is regulated by phosphorylation in P. pastoris. From the results reported herein, we suggest that P. pastoris can be employed as a heterologous expression system to assay the WCA of PIPs and to monitor the AQP-mediated channel gating mechanism, and it can be developed to screen inhibitors/effectors of PIPs.

  12. Phosphorylation of plasma membrane aquaporin regulates temperature-dependent opening of tulip petals.

    PubMed

    Azad, Abul Kalam; Sawa, Yoshihiro; Ishikawa, Takahiro; Shibata, Hitoshi

    2004-05-01

    The opening and closing of tulip petals was reproduced in the dark by changing the temperature from 5 degrees C to 20 degrees C for opening and 20 degrees C to 5 degrees C for closing. The opening process was accompanied by (3)H(2)O transport through the stem from the incubation medium to the petals. A Ca(2+)-channel blocker and a Ca(2+)-chelator inhibited petal opening and (3)H(2)O transport. Several proteins in the isolated plasma membrane fraction were phosphorylated in the presence of 25 micro M Ca(2+) at 20 degrees C. The 31-kDa protein that was phosphorylated, was suggested immunologically as the putative plasma membrane aquaporin (PM-AQP). This phosphorylated PM-AQP clearly reacted with the anti-phospho-Ser. In-gel assay revealed the presence of a 45-kDa Ca(2+)-dependent protein kinase in the isolated plasma membrane. Phosphorylation of the putative PM-AQP was thought to activate the water channel composed of PM-AQP. Dephosphorylation of the phosphorylated PM-AQP was also observed during petal closing at 5 degrees C, suggesting the inactivation of the water channel.

  13. Intracellular energy depletion triggers programmed cell death during petal senescence in tulip

    PubMed Central

    Azad, A. K.; Ishikawa, Takayuki; Ishikawa, Takahiro; Shibata, H.

    2008-01-01

    Programmed cell death (PCD) in petals provides a model system to study the molecular aspects of organ senescence. In this study, the very early triggering signal for PCD during the senescence process from young green buds to 14-d-old petals of Tulipa gesneriana was determined. The opening and closing movement of petals of intact plants increased for the first 3 d and then gradually decreased. DNA degradation and cytochrome c (Cyt c) release were clearly observed in 6-d-old flowers. Oxidative stress or ethylene production can be excluded as the early signal for petal PCD. In contrast, ATP was dramatically depleted after the first day of flower opening. Sucrose supplementation to cut flowers maintained their ATP levels and the movement ability for a longer time than in those kept in water. The onset of DNA degradation, Cyt c release, and petal senescence was also delayed by sucrose supplementation to cut flowers. These results suggest that intracellular energy depletion, rather than oxidative stress or ethylene production, may be the very early signal to trigger PCD in tulip petals. PMID:18515833

  14. Skill in Retrievals

    NASA Technical Reports Server (NTRS)

    Aumann, Hartmut H.; Manning, Evan

    2008-01-01

    Retrieval Skill quantifies the ability of one retrieval from a sounder to be more accurate than the best forecast relative to another with the same of another sounder. This is summarized using a Retrieval Anomaly Skill Score (RASS) which is the cor (retrieved-background, truth-background) * sqrt(f), Where f is defined as the ratio of accepted to the possible retrievals. Charts show various features and comparisons of RASS to other methods of retrieval.

  15. Molecular identification of tuliposide B-converting enzyme: a lactone-forming carboxylesterase from the pollen of tulip.

    PubMed

    Nomura, Taiji; Murase, Tatsunori; Ogita, Shinjiro; Kato, Yasuo

    2015-07-01

    6-Tuliposides A (PosA) and B (PosB), which are the major secondary metabolites in tulip (Tulipa gesneriana), are enzymatically converted to the antimicrobial lactonized aglycons, tulipalins A (PaA) and B (PaB), respectively. We recently identified a PosA-converting enzyme (TCEA) as the first reported member of the lactone-forming carboxylesterases. Herein, we describe the identification of another lactone-forming carboxylesterase, PosB-converting enzyme (TCEB), which preferentially reacts with PosB to give PaB. This enzyme was isolated from tulip pollen, which showed high PosB-converting activity. Purified TCEB exhibited greater activity towards PosB than PosA, which was contrary to that of the TCEA. Novel cDNA (TgTCEB1) encoding the TCEB was isolated from tulip pollen. TgTCEB1 belonged to the carboxylesterase family and was approximately 50% identical to the TgTCEA polypeptides. Functional characterization of the recombinant enzyme verified that TgTCEB1 catalyzed the conversion of PosB to PaB with an activity comparable with the native TCEB. RT-qPCR analysis of each part of plant revealed that TgTCEB1 transcripts were limited almost exclusively to the pollen. Furthermore, the immunostaining of the anther cross-section using anti-TgTCEB1 polyclonal antibody verified that TgTCEB1 was specifically expressed in the pollen grains, but not in the anther cells. N-terminal transit peptide of TgTCEB1 was shown to function as plastid-targeted signal. Taken together, these results indicate that mature TgTCEB1 is specifically localized in plastids of pollen grains. Interestingly, PosB, the substrate of TgTCEB1, accumulated on the pollen surface, but not in the intracellular spaces of pollen grains. © 2015 The Authors The Plant Journal © 2015 John Wiley & Sons Ltd.

  16. Endovenous laser ablation of the great saphenous vein using a bare fibre versus a tulip fibre: a randomised clinical trial.

    PubMed

    Vuylsteke, M E; Thomis, S; Mahieu, P; Mordon, S; Fourneau, I

    2012-12-01

    This clinical trial aimed to evaluate the clinical results of the use of a tulip fibre versus the use of a bare fibre for endovenous laser ablation. In a multicentre prospective randomised trial 174 patients were randomised for the treatment of great saphenous vein reflux. A duplex scan was scheduled 1 month, 6 months and 1 year postoperatively. Ecchymosis was measured on the 5th postoperative day. In addition, pain, analgesics requirement, postoperative quality of life (CIVIQ 2) and patient satisfaction rate were noted. Patients treated with a tulip fibre had significantly less postoperative ecchymosis (0.04 vs. 0.21; p < 0.001) and pain (5th day) (1.00 vs. 2.00; p < 0.001) and had a better postoperative quality of life (27 vs. 32; p = 0.023). There was no difference in analgesic intake (p = 0.11) and patient satisfaction rate (p = 0.564). The total occlusion rate at 1 year was 97.02% and there was no significant difference between the two groups (p = 0.309). Using a tulip fibre for EVLA of the great saphenous vein results, when compared with the use of a bare fibre, in equal occlusion rates at 1 year but causes less postoperative ecchymosis and pain and in a better postoperative quality of life. Copyright © 2012 European Society for Vascular Surgery. Published by Elsevier Ltd. All rights reserved.

  17. Penetration of Günther Tulip filter struts through an introducer sheath: case report and safety concerns.

    PubMed

    Contractor, Sohail G; Merkulov, Alex; Bhatti, Waseem; Lee, Michael; Gardner, Kim

    2009-08-01

    The authors present a patient who had a Günther-Tulip inferior vena cava filter placed under fluoroscopic guidance. The filter struts were seen to penetrate through the introducer sheath at deployment. This was believed to be secondary to a kink in the sheath at the site of venous entry and was due to the patient's nuchal obesity as well as his inability to turn his head to the opposite side. The introducer sheath was then placed through a long reinforced metal sheath through which the filter was then placed without complication.

  18. Mechanisms of Günther Tulip filter tilting during transfemoral placement.

    PubMed

    Matsui, Y; Horikawa, M; Ohta, K; Jahangiri Noudeh, Y; Kaufman, J A; Farsad, K

    The purpose of this study was to characterize the mechanisms of Günther Tulip filter (GTF) tilting during transfemoral placement in an experimental model with further validation in a clinical series. In an experimental study, 120 GTF placements in an inferior vena cava (IVC) model were performed using 6 configurations of pre-deployment filter position. The angle between the pre-deployment filter axis and IVC axis, and the proximity of the constrained filter legs to IVC wall prior to deployment were evaluated. The association of those pre-deployment factors with post-deployment filter tilting was analyzed. The association noted in the experimental study was then evaluated in a retrospective clinical series of 21 patients. In the experimental study, there was a significant association between the pre-deployment angle and post-deployment filter tilting (P<0.0001). With a low pre-deployment angle (≤5°), a significant association was noted between filter tilting and the proximity of the constrained filter legs to the far IVC wall (P=0.001). In a retrospective clinical study, a significant association between the pre-deployment angle and post-deployment filter tilting was also noted with a linear regression model (P=0.026). Significant association of the pre-deployment angle with post-deployment GTF tilting was shown in both the experimental and clinical studies. The experimental study also showed that proximity of filter legs is relevant when pre-deployment angle is small. Addressing these factors may result in a lower incidence of filter tilting. Copyright © 2017 Editions françaises de radiologie. Published by Elsevier Masson SAS. All rights reserved.

  19. Interaction Information Retrieval.

    ERIC Educational Resources Information Center

    Dominich, Sandor

    1994-01-01

    Discussion of information retrieval focuses on an Interaction Information Retrieval model in which documents are interconnected; queries and documents are treated in the same way; and retrieval is the result of the interconnection between query and documents. A theoretical mathematical formulation of this type of retrieval is given. (Contains 31…

  20. Retrievable inferior vena cava filters can be placed and removed with a high degree of success: Initial experience.

    PubMed

    Cohoon, Kevin P; McBride, Joseph; Friese, Jeremy L; McPhail, Ian R

    2015-10-01

    Evaluate the success rate of retrievable inferior vena cava filter (IVC) removal in a tertiary care practice. Retrievable IVC filters became readily available in the United States following Food and Drug Administration approval in 2003, and their use has increased dramatically. They represent an attractive option for patients with contraindications to anticoagulation who may only need short-term protection against pulmonary embolism. All patients who had undergone placement of a retrievable IVC filter at Mayo Clinic between 2003 and 2005 were retrospectively reviewed to evaluate our initial experience with retrievable inferior vena cava filters at a large tertiary care center. During a three-year-period of time, Mayo Clinic, Rochester, MN placed 892 IVC filters of which 460 were retrievable. Of the 460 retrievable filters placed (249 Günther Tulip®, 207 Recovery®, and 4 OptEase®), retrieval was attempted in 223 (48.5%). Of 223 initial attempts, 196 (87.9%) were initially successful and 27 (12.1%) were unsuccessful. Of the 27 unsuccessful initial retrieval attempts, 23 (85.2%) were because of the presence of significant thrombus within the filter and 4 (14.8%) were because of tilting and strut perforation. Of the 23 filters containing significant thrombus, 9 (39.1%) were later retrieved after a period of anticoagulation and resolution of the thrombus. Retrievable IVC filters can be removed with a high degree of success. Approximately one in ten retrievable IVC filter removal attempts may fail initially, usually because of significant thrombus within the filter. This does not preclude possible removal at a later date. © 2015 Wiley Periodicals, Inc.

  1. Controlled hot start and improved specificity in carrying out PCR utilizing touch-up and loop incorporated primers (TULIPS).

    PubMed

    Ailenberg, M; Silverman, M

    2000-11-01

    The PCR technique often yields nonspecific products. To overcome this problem, a simple, specific and efficient method was designed: touch-up and loop incorporated primers (TULIPS)-PCR. This approach utilizes loop primers (i.e., additional nontemplate 5' sequence that self-anneals to the 3' region and inhibits initiation of polymerization). Upon heating of the reaction, the primers melt, initiating hot start. The reaction also uses touch-up pre-cycling with gradual elevation in annealing temperatures to ensure correct pairing. The method has been validated with glyceraldehyde-3-phosphate dehydrogenase (GAPD) primers, and its general applicability is demonstrated by specific amplification of the human gelatinase A transgene from genomic DNA extracted from transgenic mice tails. The TULIPS-PCR protocol is a novel method. The self-annealing primers utilized in this method offer improved specificity and more robust synthesis compared with touch-down and manual hot start PCR. It is performed without the need to open, pause or add to the reaction mixture any nonrectant components, such as wax, antibody or nonspecific dsDNA.

  2. In vitro comparison of Günther Tulip and Celect filters: testing filtering efficiency and pressure drop.

    PubMed

    Nicolas, M; Malvé, M; Peña, E; Martínez, M A; Leask, R

    2015-02-05

    In this study, the trapping ability of the Günther Tulip and Celect inferior vena cava filters was evaluated. Thrombus capture rates of the filters were tested in vitro in horizontal position with thrombus diameters of 3 and 6mm and tube diameter of 19mm. The filters were tested in centered and tilted positions. Sets of 30 clots were injected into the model and the same process was repeated 20 times for each different condition simulated. Pressure drop experienced along the system was also measured and the percentage of clots captured was recorded. The Günther Tulip filter showed superiority in all cases, trapping almost 100% of 6mm clots both in an eccentric and tilted position and trapping 81.7% of the 3mm clots in a centered position and 69.3% in a maximum tilted position. The efficiency of all filters tested decreased as the size of the embolus decreased and as the filter was tilted. The injection of 6 clots raised the pressure drop to 4.1mmHg, which is a reasonable value that does not cause the obstruction of blood flow through the system. Copyright © 2014 Elsevier Ltd. All rights reserved.

  3. Complex Retrieval of Embedded IVC Filters: Alternative Techniques and Histologic Tissue Analysis

    SciTech Connect

    Kuo, William T.; Cupp, John S.; Louie, John D.; Kothary, Nishita; Hofmann, Lawrence V.; Sze, Daniel Y.; Hovsepian, David M.

    2012-06-15

    Purpose: We evaluated the safety and effectiveness of alternative endovascular methods to retrieve embedded optional and permanent filters in order to manage or reduce risk of long-term complications from implantation. Histologic tissue analysis was performed to elucidate the pathologic effects of chronic filter implantation. Methods: We studied the safety and effectiveness of alternative endovascular methods for removing embedded inferior vena cava (IVC) filters in 10 consecutive patients over 12 months. Indications for retrieval were symptomatic chronic IVC occlusion, caval and aortic perforation, and/or acute PE (pulmonary embolism) from filter-related thrombus. Retrieval was also performed to reduce risk of complications from long-term filter implantation and to eliminate the need for lifelong anticoagulation. All retrieved specimens were sent for histologic analysis. Results: Retrieval was successful in all 10 patients. Filter types and implantation times were as follows: one Venatech (1,495 days), one Simon-Nitinol (1,485 days), one Optease (300 days), one G2 (416 days), five Guenther-Tulip (GTF; mean 606 days, range 154-1,010 days), and one Celect (124 days). There were no procedural complications or adverse events at a mean follow-up of 304 days after removal (range 196-529 days). Histology revealed scant native intima surrounded by a predominance of neointimal hyperplasia and dense fibrosis in all specimens. Histologic evidence of photothermal tissue ablation was confirmed in three laser-treated specimens. Conclusion: Complex retrieval methods can now be used in select patients to safely remove embedded optional and permanent IVC filters previously considered irretrievable. Neointimal hyperplasia and dense fibrosis are the major components that must be separated to achieve successful retrieval of chronic filter implants.

  4. A novel "in-situ tulip-bud deployment" method for transcatheter closure of secundum atrial septal defect.

    PubMed

    Quek, Swee Chye; Wu, Wen Xia; Chan, Kit Yee; Ang, Patrick; Ho, Ting Fei; Yip, William

    2009-12-01

    We devised a new technique for interventional closure of atrial septal defect (ASD) using the Amplatzer Septal Occluder (ASO), and validated this by comparing it with a cohort using the conventional method. Transcatheter closure of ASD is a widely accepted modality of treatment. Although the outcome is good, there are occasional technical difficulties encountered. In this three-step technique, the device is protruded to form a "tulip bud." This "tulip bud" is then aligned adjacent to and along the plane of the ASD. The second step involves withdrawing the sheath in quick succession to deploy atrial discs over the septal defect. Finally, good placement of the occluder is checked before release. Twenty-seven consecutive patients (1.4-77.2 years of age, median = 15) underwent device closure by this method. Nineteen (70.4%) had a deficient aortic rim (< 5 mm). Mean (+/- SD) ASD size by transesophageal echocardiography (TEE) was 16.0 +/- 5.1 mm. The chosen ASO size was 122 +/- 8% of the ASD size. The mean (+/- SD) duration of deployment and of deployment to release was 1.27 +/- 1.91 minutes and 5.18 +/- 2.63 minutes, respectively. The total fluoroscopy and procedure time was 9.93 +/- 5.61 minutes and 68.67 +/- 28.39 minutes, respectively. Twenty-one out of 27 patients (77.8%) had closure in one attempt. Comparing these 27 patients with the previous 48 consecutive patients with a deficient aortic rim by the conventional method, there was no difference in age, body weight, Qp/Qs, ASD size and ASO size or degree of oversizing (p > 0.05). The percentage of patients with aortic root deficiency was slightly higher in "tulip-bud" group compared to the conventional group (63.2% vs. 58.4%; p = 0.039). No complications were observed in either series. This is a promising new method to circumvent some of the difficulties associated with closure of large ASDs and deficient aortic rim.

  5. EVA Retriever Demonstration

    NASA Technical Reports Server (NTRS)

    1988-01-01

    The EVA retriever is demonstrated in the Manipulator Development Facility (MDF). The retriever moves on the air bearing table 'searching' for its target, in this case tools 'dropped' by astronauts on orbit.

  6. Connectionist Interaction Information Retrieval.

    ERIC Educational Resources Information Center

    Dominich, Sandor

    2003-01-01

    Discussion of connectionist views for adaptive clustering in information retrieval focuses on a connectionist clustering technique and activation spreading-based information retrieval model using the interaction information retrieval method. Presents theoretical as well as simulation results as regards computational complexity and includes…

  7. Microfilm and Information Retrieval.

    ERIC Educational Resources Information Center

    Teplitz, Arthur

    This paper was prepared to provide a frame of reference to the role of microfilm within the information retrieval world and to provide an opportunity for evaluation of the use of microforms for active retrieval applications. The paper discusses the principles of information retrieval, considers subject and classification indexing, and describes…

  8. Connectionist Interaction Information Retrieval.

    ERIC Educational Resources Information Center

    Dominich, Sandor

    2003-01-01

    Discussion of connectionist views for adaptive clustering in information retrieval focuses on a connectionist clustering technique and activation spreading-based information retrieval model using the interaction information retrieval method. Presents theoretical as well as simulation results as regards computational complexity and includes…

  9. Mutational analysis of amino acid residues involved in catalytic activity of a family 18 chitinase from tulip bulbs.

    PubMed

    Suzukawa, Keisuke; Yamagami, Takeshi; Ohnuma, Takayuki; Hirakawa, Hideki; Kuhara, Satoru; Aso, Yoichi; Ishiguro, Masatsune

    2003-02-01

    We expressed chitinase-1 (TBC-1) from tulip bulbs (Tulipa bakeri) in E. coli cells and used site-directed mutagenesis to identify amino acid residues essential for catalytic activity. Mutations at Glu-125 and Trp-251 completely abolished enzyme activity, and activity decreased with mutations at Asp-123 and Trp-172 when glycolchitin was the substrate. Activity changed with the mutations of Trp-251 to one of several amino acids with side-chains of little hydrophobicity, suggesting that hydrophobic interaction of Trp-251 is important for the activity. Molecular dynamics (MD) simulation analysis with hevamine as the model compound showed that the distance between Asp-123 and Glu-125 was extended by mutation of Trp-251. Kinetic studies of Trp-251-mutated chitinases confirmed these various phenomena. The results suggested that Glu-125 and Trp-251 are essential for enzyme activity and that Trp-251 had a direct role in ligand binding.

  10. Long-Term Retrievability of IVC Filters: Should We Abandon Permanent Devices?

    SciTech Connect

    Berczi, V. Bottomley, J. R.; Thomas, S. M.; Taneja, S.; Gaines, P. A.; Cleveland, T. J.

    2007-09-15

    Thromboembolic disease produces a considerable disease burden, with death from pulmonary embolism in the UK alone estimated at 30,000-40,000 per year. Whilst it is unproven whether filters actually improve longevity, the morbidity and mortality associated with thromboembolic disease in the presence of contraindications to anticoagulation is high. Thus complications associated with filter insertion, and whilst they remain in situ, must be balanced against the alternatives. Permanent filters remain in situ for the remainder of the patient's life and any complications from the filters are of significant concern. Filters that are not permanent are therefore attractive in these circumstances. Retrievable filters, to avoid or decrease long-term filter complications, appear to be a significant advance in the prevention of pulmonary embolism. In this review, we discuss the safety and effectiveness of both permanent and retrievable filters as well as the retrievability of retrievable inferior vena cava (IVC) filters, to explore whether the use of permanent IVC filters can be abandoned in favor of retrievable filters. Currently four types of retrievable filters are available: the Recovery filter (Bard Peripheral Vascular, Tempe, AZ, USA), the Guenther Tulip filter (Cook, Bloomington, IN, USA), the OptEase Filter (Cordis, Roden, The Netherlands), and the ALN filter (ALN Implants Chirurgicaux, Ghisonaccia, France). Efficacy and safety data for retrievable filters are as yet based on small series, with a total number of fewer than 1,000 insertions, and follow-up is mostly short term. Current long-term data are poor and insufficient to warrant the long-term implantation of these devices into humans. The case of fractured wire from a Recovery filter that migrated to the heart causing pericardial tamponade requiring open heart surgery is a reminder that any new endovascular device remaining in situ in the long term may produce unexpected problems. We should also bear in mind that

  11. Heterotopic expression of class B floral homeotic genes supports a modified ABC model for tulip (Tulipa gesneriana).

    PubMed

    Kanno, Akira; Saeki, Hiroshi; Kameya, Toshiaki; Saedler, Heinz; Theissen, Günter

    2003-07-01

    In higher eudicotyledonous angiosperms the floral organs are typically arranged in four different whorls, containing sepals, petals, stamens and carpels. According to the ABC model, the identity of these organs is specified by floral homeotic genes of class A, A+B, B+C and C, respectively. In contrast to the sepal and petal whorls of eudicots, the perianths of many plants from the Liliaceae family have two outer whorls of almost identical petaloid organs, called tepals. To explain the Liliaceae flower morphology, van Tunen et al. (1993) proposed a modified ABC model, exemplified with tulip. According to this model, class B genes are not only expressed in whorls 2 and 3, but also in whorl 1. Thus the organs of both whorls 1 and 2 express class A plus class B genes and, therefore, get the same petaloid identity. To test this modified ABC model we have cloned and characterized putative class B genes from tulip. Two DEF- and one GLO-like gene were identified, named TGDEFA, TGDEFB and TGGLO. Northern hybridization analysis showed that all of these genes are expressed in whorls 1, 2 and 3 (outer and inner tepals and stamens), thus corroborating the modified ABC model. In addition, these experiments demonstrated that TGGLO is also weakly expressed in carpels, leaves, stems and bracts. Gel retardation assays revealed that TGGLO alone binds to DNA as a homodimer. In contrast, TGDEFA and TGDEFB cannot homodimerize, but make heterodimers with PI. Homodimerization of GLO-like protein has also been reported for lily, suggesting that this phenomenon is conserved within Liliaceae plants or even monocot species.

  12. Retrieval of Emotional Memories

    PubMed Central

    Buchanan, Tony W.

    2008-01-01

    Long-term memories are influenced by the emotion experienced during learning as well as by the emotion experienced during memory retrieval. The present article reviews the literature addressing the effects of emotion on retrieval, focusing on the cognitive and neurological mechanisms that have been revealed. The reviewed research suggests that the amygdala, in combination with the hippocampus and prefrontal cortex, plays an important role in the retrieval of memories for emotional events. The neural regions necessary for online emotional processing also influence emotional memory retrieval, perhaps through the reexperience of emotion during the retrieval process. PMID:17723029

  13. Combined use of clips and nylon snare ("tulip-bundle") as a rescue endoscopic bleeding control in a mallory-weiss syndrome.

    PubMed

    Ivekovic, Hrvoje; Radulovic, Bojana; Jankovic, Suzana; Markos, Pave; Rustemovic, Nadan

    2014-01-01

    Mallory-Weiss syndrome (MWS) accounts for 6-14% of all cases of upper gastrointestinal bleeding. Prognosis of patients with MWS is generally good, with a benign course and rare recurrence of bleeding. However, no strict recommendations exist in regard to the mode of action after a failure of primary endoscopic hemostasis. We report a case of an 83-year-old male with MWS and rebleeding after the initial endoscopic treatment with epinephrine and clips. The final endoscopic control of bleeding was achieved by a combined application of clips and a nylon snare in a "tulip-bundle" fashion. The patient had an uneventful postprocedural clinical course and was discharged from the hospital five days later. To the best of our knowledge, this is the first case report showing the "tulip-bundle" technique as a rescue endoscopic bleeding control in the esophagus.

  14. Screening method of carbohydrate-binding proteins in biological sources by capillary affinity electrophoresis and its application to determination of Tulipa gesneriana agglutinin in tulip bulbs.

    PubMed

    Nakajima, Kazuki; Kinoshita, Mitsuhiro; Oda, Yasuo; Masuko, Takashi; Kaku, Hanae; Shibuya, Naoto; Kakehi, Kazuaki

    2004-09-01

    We developed capillary affinity electrophoresis (CAE) to analyze the molecular interaction between carbohydrate chains and proteins in solution state. A mixture of oligosaccharides derived from a glycoprotein was labeled with 8-aminopyrene-1,3,6-trisulfonate (APTS), and used as glycan library without isolation. Interaction of a carbohydrate-binding protein with each oligosaccharide in the mixture could be simultaneously observed, and relative affinities of oligosaccharides toward the protein were accurately determined. In this study, we applied CAE to detect the presence of lectins in some plants (Japanese elderberry bark and tulip bulb). In the crude extract of the elderberry bark, binding activity toward sialo-carbohydrate chains could be easily detected. We also examined the presence of lectins in the crude extract of tulip bulbs and determined the detailed carbohydrate-binding specificity of Tulipa gesneriana agglutinin (TGA), one of the lectins from tulip bulbs. Kinetic studies demonstrated that TGA showed novel carbohydrate-binding specificity and preferentially recognized triantennary oligosaccharides with Gal residues at nonreducing termini and a Fuc residue linked through alpha(1-6) linkage at chitobiose portion of the reducing termini but not tetraantennary carbohydrates. The results described here indicate that CAE will be a valuable method for both screening of lectins in natural sources and determination of their detailed carbohydrate-binding specificities.

  15. RETRIEVAL EVENTS EVALUATION

    SciTech Connect

    T. Wilson

    1999-11-12

    The purpose of this analysis is to evaluate impacts to the retrieval concept presented in the Design Analysis ''Retrieval Equipment and Strategy'' (Reference 6), from abnormal events based on Design Basis Events (DBE) and Beyond Design Basis Events (BDBE) as defined in two recent analyses: (1) DBE/Scenario Analysis for Preclosure Repository Subsurface Facilities (Reference 4); and (2) Preliminary Preclosure Design Basis Event Calculations for the Monitored Geologic Repository (Reference 5) The objective of this task is to determine what impacts the DBEs and BDBEs have on the equipment developed for retrieval. The analysis lists potential impacts and recommends changes to be analyzed in subsequent design analyses for developed equipment, or recommend where additional equipment may be needed, to allow retrieval to be performed in all DBE or BDBE situations. This analysis supports License Application design and therefore complies with the requirements of Systems Description Document input criteria comparison as presented in Section 7, Conclusions. In addition, the analysis discusses the impacts associated with not using concrete inverts in the emplacement drifts. The ''Retrieval Equipment and Strategy'' analysis was based on a concrete invert configuration in the emplacement drift. The scope of the analysis, as presented in ''Development Plan for Retrieval Events Evaluation'' (Reference 3) includes evaluation and criteria of the following: Impacts to retrieval from the emplacement drift based on DBE/BDBEs, and changes to the invert configuration for the preclosure period. Impacts to retrieval from the main drifts based on DBE/BDBEs for the preclosure period.

  16. Information Retrieval System.

    ERIC Educational Resources Information Center

    Mahle, Jack D., Jr.

    The Fort Detrick Information Retrieval System is a system of computer programs written in COBOL for a CDC 3150 to store and retrieve information about the scientific and technical reports and documents of the Fort Detrick Technical Library. The documents and reports have been abstracted and indexed. This abstract, the subject matter descriptors,…

  17. Natural Language Information Retrieval.

    ERIC Educational Resources Information Center

    Strzalkowski, Tomek

    1995-01-01

    Describes an information retrieval system in which advanced natural language processing is used to enhance the effectiveness of term-based document retrieval by preprocessing the documents; discovering interterm dependencies and build a conceptual hierarchy specific to database domain; and processing the user's natural language requests into…

  18. Efficient Graffiti Image Retrieval

    SciTech Connect

    Yang, Chunlei; Wong, Pak C.; Ribarsky, William; Fan, Jianping

    2012-07-05

    Research of graffiti character recognition and retrieval, as a branch of traditional optical character recognition (OCR), has started to gain attention in recent years. We have investigated the special challenge of the graffiti image retrieval problem and propose a series of novel techniques to overcome the challenges. The proposed bounding box framework locates the character components in the graffiti images to construct meaningful character strings and conduct image-wise and semantic-wise retrieval on the strings rather than the entire image. Using real world data provided by the law enforcement community to the Pacific Northwest National Laboratory, we show that the proposed framework outperforms the traditional image retrieval framework with better retrieval results and improved computational efficiency.

  19. SIRT1 genetic variants associate with the metabolic response of Caucasians to a controlled lifestyle intervention--the TULIP Study.

    PubMed

    Weyrich, Peter; Machicao, Fausto; Reinhardt, Julia; Machann, Jürgen; Schick, Fritz; Tschritter, Otto; Stefan, Norbert; Fritsche, Andreas; Häring, Hans-Ulrich

    2008-11-12

    Sirtuin1 (SIRT1) regulates gene expression in distinct metabolic pathways and mediates beneficial effects of caloric restriction in animal models. In humans, SIRT1 genetic variants associate with fasting energy expenditure. To investigate the relevance of SIRT1 for human metabolism and caloric restriction, we analyzed SIRT1 genetic variants in respect to the outcome of a controlled lifestyle intervention in Caucasians at risk for type 2 diabetes. A total of 1013 non-diabetic Caucasians from the Tuebingen Family Study (TUEF) were genotyped for four tagging SIRT1 SNPs (rs730821, rs12413112, rs7069102, rs2273773) for cross-sectional association analyses with prediabetic traits. SNPs that associated with basal energy expenditure in the TUEF cohort were additionally analyzed in 196 individuals who underwent a controlled lifestyle intervention (Tuebingen Lifestyle Intervention Program; TULIP). Multivariate regressions analyses with adjustment for relevant covariates were performed to detect associations of SIRT1 variants with the changes in anthropometrics, weight, body fat or metabolic characteristics (blood glucose, insulin sensitivity, insulin secretion and liver fat, measured by magnetic resonance techniques) after the 9-month follow-up test in the TULIP study. Minor allele (X/A) carriers of rs12413112 (G/A) had a significantly lower basal energy expenditure (p = 0.04) and an increased respiratory quotient (p = 0.02). This group (rs12413112: X/A) was resistant against lifestyle-induced improvement of fasting plasma glucose (GG: -2.01%, X/A: 0.53%; p = 0.04), had less increase in insulin sensitivity (GG: 17.3%, X/A: 9.6%; p = 0.05) and an attenuated decline in liver fat (GG: -38.4%, X/A: -7.5%; p = 0.01). SIRT1 plays a role for the individual lifestyle intervention response, possibly owing to decreased basal energy expenditure and a lower lipid-oxidation rate in rs12413112 X/A allele carriers. SIRT1 genetic variants may, therefore, represent a relevant determinant for

  20. SIRT1 genetic variants associate with the metabolic response of Caucasians to a controlled lifestyle intervention – the TULIP Study

    PubMed Central

    Weyrich, Peter; Machicao, Fausto; Reinhardt, Julia; Machann, Jürgen; Schick, Fritz; Tschritter, Otto; Stefan, Norbert; Fritsche, Andreas; Häring, Hans-Ulrich

    2008-01-01

    Background Sirtuin1 (SIRT1) regulates gene expression in distinct metabolic pathways and mediates beneficial effects of caloric restriction in animal models. In humans, SIRT1 genetic variants associate with fasting energy expenditure. To investigate the relevance of SIRT1 for human metabolism and caloric restriction, we analyzed SIRT1 genetic variants in respect to the outcome of a controlled lifestyle intervention in Caucasians at risk for type 2 diabetes. Methods A total of 1013 non-diabetic Caucasians from the Tuebingen Family Study (TUEF) were genotyped for four tagging SIRT1 SNPs (rs730821, rs12413112, rs7069102, rs2273773) for cross-sectional association analyses with prediabetic traits. SNPs that associated with basal energy expenditure in the TUEF cohort were additionally analyzed in 196 individuals who underwent a controlled lifestyle intervention (Tuebingen Lifestyle Intervention Program; TULIP). Multivariate regressions analyses with adjustment for relevant covariates were performed to detect associations of SIRT1 variants with the changes in anthropometrics, weight, body fat or metabolic characteristics (blood glucose, insulin sensitivity, insulin secretion and liver fat, measured by magnetic resonance techniques) after the 9-month follow-up test in the TULIP study. Results Minor allele (X/A) carriers of rs12413112 (G/A) had a significantly lower basal energy expenditure (p = 0.04) and an increased respiratory quotient (p = 0.02). This group (rs12413112: X/A) was resistant against lifestyle-induced improvement of fasting plasma glucose (GG: -2.01%, X/A: 0.53%; p = 0.04), had less increase in insulin sensitivity (GG: 17.3%, X/A: 9.6%; p = 0.05) and an attenuated decline in liver fat (GG: -38.4%, X/A: -7.5%; p = 0.01). Conclusion SIRT1 plays a role for the individual lifestyle intervention response, possibly owing to decreased basal energy expenditure and a lower lipid-oxidation rate in rs12413112 X/A allele carriers. SIRT1 genetic variants may, therefore

  1. The TULIP superfamily of eukaryotic lipid-binding proteins as a mediator of lipid sensing and transport.

    PubMed

    Alva, Vikram; Lupas, Andrei N

    2016-08-01

    The tubular lipid-binding (TULIP) superfamily has emerged in recent years as a major mediator of lipid sensing and transport in eukaryotes. It currently encompasses three protein families, SMP-like, BPI-like, and Takeout-like, which share a common fold. This fold consists of a long helix wrapped in a highly curved anti-parallel β-sheet, enclosing a central, lipophilic cavity. The SMP-like proteins, which include subunits of the ERMES complex and the extended synaptotagmins (E-Syts), appear to be mainly located at membrane contacts sites (MCSs) between organelles, mediating inter-organelle lipid exchange. The BPI-like proteins, which include the bactericidal/permeability-increasing protein (BPI), the LPS (lipopolysaccharide)-binding protein (LBP), the cholesteryl ester transfer protein (CETP), and the phospholipid transfer protein (PLTP), are either involved in innate immunity against bacteria through their ability to sense lipopolysaccharides, as is the case for BPI and LBP, or in lipid exchange between lipoprotein particles, as is the case for CETP and PLTP. The Takeout-like proteins, which are comprised of insect juvenile hormone-binding proteins and arthropod allergens, transport, where known, lipid hormones to target tissues during insect development. In all cases, the activity of these proteins is underpinned by their ability to bind large, hydrophobic ligands in their central cavity and segregate them away from the aqueous environment. Furthermore, where they are involved in lipid exchange, recent structural studies have highlighted their ability to establish lipophilic, tubular channels, either between organelles in the case of SMP domains or between lipoprotein particles in the case of CETP. Here, we review the current knowledge on the structure, versatile functions, and evolution of the TULIP superfamily. We propose a deep evolutionary split in this superfamily, predating the Last Eukaryotic Common Ancestor, between the SMP-like proteins, which act on

  2. Topological Aspects of Information Retrieval.

    ERIC Educational Resources Information Center

    Egghe, Leo; Rousseau, Ronald

    1998-01-01

    Discusses topological aspects of theoretical information retrieval, including retrieval topology; similarity topology; pseudo-metric topology; document spaces as topological spaces; Boolean information retrieval as a subsystem of any topological system; and proofs of theorems. (LRW)

  3. Retrieval options study

    SciTech Connect

    Not Available

    1980-03-01

    This Retrieval Options Study is part of the systems analysis activities of the Office of Nuclear Waste Isolation to develop the scientific and technological bases for radioactive waste repositories in various geologic media. The study considers two waste forms, high level waste and spent fuel, and defines various classes of waste retrieval and recovery. A methodology and data base are developed which allow the relative evaluation of retrieval and recovery costs and the following technical criteria: safety; technical feasibility; ease of retrieval; probable intact retrieval time; safeguards; monitoring; criticality; and licensability. A total of 505 repository options are defined and the cost and technical criteria evaluated utilizing a combination of facts and engineering judgments. The repositories evaluated are selected combinations of the following parameters: Geologic Media (salt, granite, basalt, shale); Retrieval Time after Emplacement (5 and 25 years); Emplacement Design (nominal hole, large hole, carbon steel canister, corrosion resistant canister, backfill in hole, nominal sleeves, thick wall sleeves); Emplacement Configuration (single vertical, multiple vertical, single horizontal, multiple horizontal, vaults; Thermal Considerations; (normal design, reduced density, once-through ventilation, recirculated ventilation); Room Backfill; (none, run-of-mine, early, 5 year delay, 25 year delay, decommissioned); and Rate of Retrieval; (same as emplacement, variably slower depending on repository/canister condition).

  4. Complete nucleotide sequence of Tulip virus X (TVX-J): the border between species and strains within the genus Potexvirus.

    PubMed

    Yamaji, Y; Kagiwada, S; Nakabayashi, H; Ugaki, M; Namba, S

    2001-12-01

    The complete nucleotide sequence of the genomic RNA of Tulip virus X Japanese isolate (TVX-J) has been determined. The sequence is 6056 nucleotides in length, excluding the poly(A) tail at the 3' terminus, and contains five open reading frames (ORFs) coding for proteins of Mr 153, 25, 12, 10, and 22 kDa (ORFs 1 through 5, respectively). The genome organization of TVX-J is similar to that of potexviruses, and the encoded proteins share a high degree of homology to the corresponding proteins of other potexviruses. Phylogenetic analyses based on the RNA-dependent RNA polymerase (RdRp) protein (the methyltransferase, helicase, and polymerase domains) encoded by ORF1 and the capsid protein (CP) encoded by ORF5, revealed a close relationship of TVX-J to Plantago asiatica mosaic virus (PlAMV). Pairwise comparison analyses revealed that the relationship between TVX and PlAMV is intermediate between that of strains and species, though previously they have not been considered related. Due to the relatively distant relationships of their replication apparatus and triple gene blocks, we conclude that TVX and PlAMV should be classified as distinct viruses. In addition, the borderline between species and strains of potexviruses is discussed.

  5. Induction of bulb organogenesis in in vitro cultures of tarda tulip (Tulipa tarda Stapf.) from seed-derived explants.

    PubMed

    Maślanka, Małgorzata; Bach, Anna

    2014-01-01

    A protocol for obtaining bulbs via in vitro organogenesis was developed for tarda tulip (Tulipa tarda Stapf). Scale explants were obtained from bulbs formed at the base of seedlings or from adventitious bulbs that developed from callus tissue forming on stolons or on germinating seeds. Some explants were subjected to chilling at 5°C for 12 wk. The culture media contained 3 or 6% sucrose and was supplemented with either no growth regulators, either 0.5 μM 6-benzyl-aminopurine (BAP) or 18.9 or 94.6 μM abscisic acid (ABA). Cultures were maintained in the dark at 20°C. Callus tissue developed mainly on media without growth regulators or with BAP. Callus was formed from up to 96% of explants derived from non-chilled adventitious bulbs that were treated with 3% sucrose and 0.5 μM BAP. Less callus was formed from chilled explants compared with non-chilled explants. Newly formed adventitious bulbs appeared on the explants via direct and indirect organogenesis. The media with BAP promoted the formation of adventitious bulbs at a rate of 56-92% from non-chilled explants, whereas a maximum rate of 36% was observed from chilled explants. ABA inhibited the induction of adventitious bulbs and callus. The adventitious bulbs obtained in these experiments contained a meristem, which was evidence that they had developed properly.

  6. Wire Retrieves Broken Pin

    NASA Technical Reports Server (NTRS)

    Burow, G. H.

    1984-01-01

    Safety wire retains pieces of broken tool. Retrieval wire running through shaft of tool used to pull pieces of tool out of hole, should tool break during use. Safety wire concept suitable for pins subject to deflection or breakage.

  7. RETRIEVAL EQUIPMENT DESCRIPTIONS

    SciTech Connect

    J. Steinhoff

    1997-08-25

    The objective and the scope of this document are to list and briefly describe the major mobile equipment necessary for waste package (WP) retrieval from the proposed subsurface nuclear waste repository at Yucca Mountain. Primary performance characteristics and some specialized design features of the equipment are explained and summarized in the individual subsections of this document. There are no quality assurance requirements or QA controls in this document. Retrieval under normal conditions is accomplished with the same fleet of equipment as is used for emplacement. Descriptions of equipment used for retrieval under normal conditions is found in Emplacement Equipment Descriptions, DI: BCAF00000-01717-5705-00002 (a document in progress). Equipment used for retrieval under abnormal conditions is addressed in this document and consists of the following: (1) Inclined Plane Hauler; (2) Bottom Lift Transporter; (3) Load Haul Dump (LHD) Loader; (4) Heavy Duty Forklift for Emplacement Drifts; (5) Covered Shuttle Car; (6) Multipurpose Vehicle; and (7) Scaler.

  8. Data-Retrieval System

    NASA Technical Reports Server (NTRS)

    Lawrence, P. R.

    1982-01-01

    NASA Graphics and Display System (NGDS) helps solve problem of data retrieval for management. Since NGDS is interactive online system, user controls display content and format, and has capability of always working with latest version of his data.

  9. Information retrieval system

    NASA Technical Reports Server (NTRS)

    Berg, R. F.; Holcomb, J. E.; Kelroy, E. A.; Levine, D. A.; Mee, C., III

    1970-01-01

    Generalized information storage and retrieval system capable of generating and maintaining a file, gathering statistics, sorting output, and generating final reports for output is reviewed. File generation and file maintenance programs written for the system are general purpose routines.

  10. Retrieving Patent Information Online

    ERIC Educational Resources Information Center

    Kaback, Stuart M.

    1978-01-01

    This paper discusses patent information retrieval from online files in terms of types of questions, file contents, coverage, timeliness, and other file variations. CLAIMS, Derwent, WPI, APIPAT and Chemical Abstracts Service are described. (KP)

  11. Retrieving Patent Information Online

    ERIC Educational Resources Information Center

    Kaback, Stuart M.

    1978-01-01

    This paper discusses patent information retrieval from online files in terms of types of questions, file contents, coverage, timeliness, and other file variations. CLAIMS, Derwent, WPI, APIPAT and Chemical Abstracts Service are described. (KP)

  12. Specific expression of the vacuolar iron transporter, TgVit, causes iron accumulation in blue-colored inner bottom segments of various tulip petals.

    PubMed

    Momonoi, Kazumi; Tsuji, Toshiaki; Kazuma, Kohei; Yoshida, Kumi

    2012-01-01

    Several flowers of Tulipa gesneriana exhibit a blue color in the bottom segments of the inner perianth. We have previously reported the inner-bottom tissue-specific iron accumulation and expression of the vacuolar iron transporter, TgVit1, in tulip cv. Murasakizuisho. To clarify whether the TgVit1-dependent iron accumulation and blue-color development in tulip petals are universal, we analyzed anthocyanin, its co-pigment components, iron contents and the expression of TgVit1 mRNA in 13 cultivars which show a blue color in the bottom segments of the inner perianth accompanying yellow- and white-colored inner-bottom petals. All of the blue bottom segments contained the same anthocyanin component, delphinidin 3-rutinoside. The flavonol composition varied with cultivar and tissue part. The major flavonol in the bottom segments of the inner perianth was rutin. The iron content in the upper part was less than that in the bottom segments of the inner perianth. The iron content in the yellow and white petals was higher in the bottom segment of the inner perianth than in the upper tissues. TgVit1 mRNA expression was apparent in all of the bottom tissues of the inner perianth. The result of a reproduction experiment by mixing the constituents suggests that the blue coloration in tulip petals is generally caused by iron complexation to delphinidin 3-rutinoside and that the iron complex is solubilized and stabilized by flavonol glycosides. TgVit1-dependent iron accumulation in the bottom segments of the inner perianth might be controlled by an unknown system that differentiated the upper parts and bottom segments of the inner perianth.

  13. A vacuolar iron transporter in tulip, TgVit1, is responsible for blue coloration in petal cells through iron accumulation.

    PubMed

    Momonoi, Kazumi; Yoshida, Kumi; Mano, Shoji; Takahashi, Hideyuki; Nakamori, Chihiro; Shoji, Kazuaki; Nitta, Akira; Nishimura, Mikio

    2009-08-01

    Blue color in flowers is due mainly to anthocyanins, and a considerable part of blue coloration can be attributed to metal-complexed anthocyanins. However, the mechanism of metal ion transport into vacuoles and subsequent flower color development has yet to be fully explored. Previously, we studied the mechanism of blue color development specifically at the bottom of the inner perianth in purple tulip petals of Tulipa gesneriana cv. Murasakizuisho. We found that differences in iron content were associated with the development of blue- and purple-colored cells. Here, we identify a vacuolar iron transporter in T. gesneriana (TgVit1), and characterize the localization and function of this transporter protein in tulip petals. The amino acid sequence of TgVit1 is 85% similar that of the Arabidopsis thaliana vacuolar iron transporter AtVIT1, and also showed similarity to the AtVIT1 homolog in yeast, Ca(2+)-sensitive cross-complementer 1 (CCC1). The gene TgVit1 was expressed exclusively in blue-colored epidermal cells, and protein levels increased with increasing mRNA expression and blue coloration. Transient expression experiments revealed that TgVit1 localizes to the vacuolar membrane, and is responsible for the development of the blue color in purple cells. Expression of TgVit1 in yeast rescued the growth defect of ccc1 mutant cells in the presence of high concentrations of FeSO(4). Our results indicate that TgVit1 plays an essential role in blue coloration as a vacuolar iron transporter in tulip petals. These results suggest a new role for involvement of a vacuolar iron transporter in blue flower color development.

  14. Retrieval of Tip-embedded Inferior Vena Cava Filters by Using the Endobronchial Forceps Technique: Experience at a Single Institution.

    PubMed

    Stavropoulos, S William; Ge, Benjamin H; Mondschein, Jeffrey I; Shlansky-Goldberg, Richard D; Sudheendra, Deepak; Trerotola, Scott O

    2015-06-01

    To evaluate the use of endobronchial forceps to retrieve tip-embedded inferior vena cava (IVC) filters. This institutional review board-approved, HIPAA-compliant retrospective study included 114 patients who presented with tip-embedded IVC filters for removal from January 2005 to April 2014. The included patients consisted of 77 women and 37 men with a mean age of 43 years (range, 18-79 years). Filters were identified as tip embedded by using rotational venography. Rigid bronchoscopy forceps were used to dissect the tip or hook of the filter from the wall of the IVC. The filter was then removed through the sheath by using the endobronchial forceps. Statistical analysis entailed calculating percentages, ranges, and means. The endobronchial forceps technique was used to successfully retrieve 109 of 114 (96%) tip-embedded IVC filters on an intention-to-treat basis. Five failures occurred in four patients in whom the technique was attempted but failed and one patient in whom retrieval was not attempted. Filters were in place for a mean of 465 days (range, 31-2976 days). The filters in this study included 10 Recovery, 33 G2, eight G2X, 11 Eclipse, one OptEase, six Option, 13 Günther Tulip, one ALN, and 31 Celect filters. Three minor complications and one major complication occurred, with no permanent sequelae. The endobronchial forceps technique can be safely used to remove tip-embedded IVC filters. © RSNA, 2014.

  15. Concurrent growth of InSe wires and In2O3 tulip-like structures in the Au-catalytic vapour-liquid-solid process

    NASA Astrophysics Data System (ADS)

    Taurino, A.; Signore, M. A.

    2015-06-01

    In this work, the concurrent growth of InSe and In2O3 nanostructures, obtained by thermal evaporation of InSe powders on Au-covered Si substrates, has been investigated by scanning and transmission electron microscopy techniques. The vapour-solid and Au catalytic vapour-liquid-solid growth mechanisms, responsible of the simultaneous development of the two different types of nanostructures, i.e. InSe wires and In2O3 tulip-like structures respectively, are discussed in detail. The thermodynamic processes giving rise to the obtained morphologies and materials are explained.

  16. Retrieval with gene queries.

    PubMed

    Sehgal, Aditya K; Srinivasan, Padmini

    2006-04-21

    Accuracy of document retrieval from MEDLINE for gene queries is crucially important for many applications in bioinformatics. We explore five information retrieval-based methods to rank documents retrieved by PubMed gene queries for the human genome. The aim is to rank relevant documents higher in the retrieved list. We address the special challenges faced due to ambiguity in gene nomenclature: gene terms that refer to multiple genes, gene terms that are also English words, and gene terms that have other biological meanings. Our two baseline ranking strategies are quite similar in performance. Two of our three LocusLink-based strategies offer significant improvements. These methods work very well even when there is ambiguity in the gene terms. Our best ranking strategy offers significant improvements on three different kinds of ambiguities over our two baseline strategies (improvements range from 15.9% to 17.7% and 11.7% to 13.3% depending on the baseline). For most genes the best ranking query is one that is built from the LocusLink (now Entrez Gene) summary and product information along with the gene names and aliases. For others, the gene names and aliases suffice. We also present an approach that successfully predicts, for a given gene, which of these two ranking queries is more appropriate. We explore the effect of different post-retrieval strategies on the ranking of documents returned by PubMed for human gene queries. We have successfully applied some of these strategies to improve the ranking of relevant documents in the retrieved sets. This holds true even when various kinds of ambiguity are encountered. We feel that it would be very useful to apply strategies like ours on PubMed search results as these are not ordered by relevance in any way. This is especially so for queries that retrieve a large number of documents.

  17. Active optics and modified-Rumsey wide-field telescopes: MINITRUST demonstrators with vase- and tulip-form mirrors

    NASA Astrophysics Data System (ADS)

    Lemaître, Gérard R.; Montiel, Pierre; Joulié, Patrice; Dohlen, Kjetil; Lanzoni, Patrick

    2005-12-01

    Wide-field astronomy requires the development of larger aperture telescopes. The optical properties of a three-mirror modified-Rumsey design provide significant advantages when compared to other telescope designs: (i) at any wavelength, the design has a flat field and is anastigmatic; (ii) the system is extremely compact, i.e., it is almost four times shorter than a Schmidt. Compared to the equally compact flat-field Ritchey-Chrétien with a doublet-lens corrector, as developed for the Sloan digital sky survey - and which requires the polishing of six optical surfaces - the proposed modified-Rumsey design requires only a two-surface polishing and provides a better imaging quality. All the mirrors are spheroids of the hyperboloid type. Starting from the classical Rumsey design, it is shown that the use of all eight available free parameters allows the simultaneous aspherization of the primary and tertiary mirrors by active optics methods from a single deformable substrate. The continuity conditions between the primary and the tertiary hyperbolizations are achieved by an intermediate narrow ring of constant thickness that is not optically used. After the polishing of a double vase form in a spherical shape, the primary-tertiary hyperbolizations are achieved by in situ stressing. The tulip-form secondary is hyperbolized by stress polishing. Other active optics alternatives are possible for a space telescope. The modified-Rumsey design is of interest for developing large space- and ground-based survey telescopes in UV, visible, or IR ranges, such as currently demonstrated with the construction of identical telescopes MINITRUST-1 and -2, f/5 - 2° field of view. Double-pass optical tests show diffraction-limited images.

  18. Active optics and modified-Rumsey wide-field telescopes: MINITRUST demonstrators with vase- and tulip-form mirrors.

    PubMed

    Lemaître, Gérard R; Montiel, Pierre; Joulié, Patrice; Dohlen, Kjetil; Lanzoni, Patrick

    2005-12-01

    Wide-field astronomy requires the development of larger aperture telescopes. The optical properties of a three-mirror modified-Rumsey design provide significant advantages when compared to other telescope designs: (i) at any wavelength, the design has a flat field and is anastigmatic; (ii) the system is extremely compact, i.e., it is almost four times shorter than a Schmidt. Compared to the equally compact flat-field Ritchey-Chrétien with a doublet-lens corrector, as developed for the Sloan digital sky survey-and which requires the polishing of six optical surfaces-the proposed modified-Rumsey design requires only a two-surface polishing and provides a better imaging quality. All the mirrors are spheroids of the hyperboloid type. Starting from the classical Rumsey design, it is shown that the use of all eight available free parameters allows the simultaneous aspherization of the primary and tertiary mirrors by active optics methods from a single deformable substrate. The continuity conditions between the primary and the tertiary hyperbolizations are achieved by an intermediate narrow ring of constant thickness that is not optically used. After the polishing of a double vase form in a spherical shape, the primary-tertiary hyperbolizations are achieved by in situ stressing. The tulip-form secondary is hyperbolized by stress polishing. Other active optics alternatives are possible for a space telescope. The modified-Rumsey design is of interest for developing large space- and ground-based survey telescopes in UV, visible, or IR ranges, such as currently demonstrated with the construction of identical telescopes MINITRUST-1 and -2, f/5-2 degrees field of view. Double-pass optical tests show diffraction-limited images.

  19. Retrieval of abstract semantics.

    PubMed

    Noppeney, Uta; Price, Cathy J

    2004-05-01

    Behavioural and neuropsychological evidence suggests that abstract and concrete concepts might be represented, retrieved and processed differently in the human brain. Using fMRI, we demonstrate that retrieval of abstract relative to sensory-based semantics during synonym judgements increased activation in a left frontotemporal system that has been associated with semantic processing particularly at the sentence level. Since activation increases were observed irrespective of the degree of difficulty, we suggest that these differential activations might reflect a particular retrieval mechanism or strategy for abstract concepts. In contrast to sensory-based semantics, the meaning of abstract concepts is largely specified by their usage in language rather than by their relations to the physical world. Subjects might therefore generate an appropriate semantic sentential context to fully explore and specify the meaning of abstract concepts. Our results also explain why abstract semantics is vulnerable to left frontotemporal lesions.

  20. Retrieval Studies with LIDORT

    NASA Technical Reports Server (NTRS)

    Bhartia, P. K. (Technical Monitor); Spurr, Robert J. D.; Chance, K. V.

    2003-01-01

    This short program of LIDORT-based research in atmospheric trace gas retrieval was conducted over the 1 year period 01 July 2002 to 30 June 2003. After consultation with the NASA reporting officer, the first of the two original proposal activities (development of a direct-fitting total O3 column retrieval algorithm with operational capability for GOME data) was replaced by other tasks. The three activities addressed were: (1) Sensitivity studies for column and profile retrieval of NO2 distributions from a new generation of multi-axis ground-based spectrometers; (2) use of the LIDORT-RRS model to determine the effect of inelastic rotational Raman scattering at SBUV wavelengths; (3) an examination of ozone profile weighting functions in the presence of optically thick tropospheric clouds.

  1. Retrieval of transuranic waste

    SciTech Connect

    Not Available

    1988-07-19

    Soil removal and drum retrieval equipment are being developed and demonstrated in support of the Transuranic Waste Facility (TWF) program. Accomplishments to date include: Soil removal equipment, a telescoping excavator and high velocity vacuum truck were selected for soil removal; Preliminary demonstrations, the capabilities of both the telescoping excavator and vacuum truck were demonstrated by the vendors; Shielding Lifting Canister, Functional parameters were defined and design is 95% complete; and Full-scale demonstration, SRL test mounds were selected for a full-scale drum retrieval demonstration. Further development will include an integrated full-scale demonstration. Several drums buried in non-radioactive TRU test mounds will be retrieved. Planning for the demonstration is underway. A telescoping excavator is being acquired, the shielded lifting canister will be fabricated and pre-tested, and a vacuum truck will be leased. 5 figs.

  2. Retrieving similar color images

    NASA Astrophysics Data System (ADS)

    Gagliardi, Isabella; Schettini, Raimondo

    1998-09-01

    There is a great demand for efficient tools that can, on the basis of the pictorial content, organize large quantities of images and rapidly retrieve those of interest. With that goal in mind we present a method for indexing complex color images. The basic idea is to exploit image data decomposition and compression based on the standard Haar multiresolution wavelet transform to describe image content. In this way we are able to effectively eliminate data redundancy and concisely represent the salient features of the image in image signatures of predefined lengths. In the retrieval phase image signatures are compared using a similarity measure that the system has 'learned' from user's. Experimental results confirm the feasibility of our approach, which outperforms more standard procedures, in retrieval accuracy and at lower computational costs.

  3. Docking and retrieval mechanism

    NASA Technical Reports Server (NTRS)

    Tewell, J. R.; Spencer, R. A.

    1977-01-01

    An engineering prototype docking and retrieval mechanism (DRM) which enables two spacecraft to dock and be structurally joined on-orbit is described. The joining of two spacecraft or payloads on-orbit supports future planned space activities such as payload servicing, deployment and retrieval, and assembly or large space systems. Advantages of the DRM include: it is a nonimpact docking mechanism; does not require impact absorbing mechanisms or attitude stabilization on the target spacecraft; is capable of docking to a spinning spacecraft; and can spin up and deploy a spinning spacecraft or payload.

  4. Docking and retrieval mechanism

    NASA Technical Reports Server (NTRS)

    Tewell, J. R.; Spencer, R. A.

    1977-01-01

    An engineering prototype docking and retrieval mechanism (DRM) is described which enables two spacecraft to dock and be structurally joined on-orbit. The joining of two spacecraft or payloads on-orbit supports future planned space activities such as payload servicing, deployment and retrieval, and assembly of large space systems. The DRM, as developed, provides advantages over prior approaches because it is a nonimpact docking mechanism, does not require impact absorbing mechanisms or attitude stabilization on the target spacecraft, is capable of docking to a spinning spacecraft, and can spin up and deploy a spinning spacecraft or payload.

  5. A pilot study to examine the effect of the Tulip oropharyngeal airway on ventilation immediately after mask ventilation following the induction of anaesthesia.

    PubMed

    Robinson, P N; Shaikh, A; Sabir, N M; Vaughan, D J A; Kynoch, M; Hasan, M

    2014-07-01

    The Tulip airway is an adult, disposable, single-sized oropharyngeal airway, that is connectable to an anaesthetic circuit. After a standardised induction of anaesthesia in 75 patients, the ease of insertion, intracuff pressure and intracuff volume were measured, as were the end-tidal carbon dioxide levels, airway pressures and tidal volumes over three breaths. Successful first-time insertion was achieved in 72 patients (96%, CI 88.8-99.2%) and after two attempts in 74 patients (99%, CI 92.8-100%). There was outright failure only in one patient. In 60 patients (80%, CI 72.2-90.4%), the Tulip airway provided a patent airway without additional manoeuvres, but in 14 patients, jaw thrust or head extension was necessary for airway patency. The main need for these adjuncts appeared to be an initial under-inflation of the cuff. These promising results are consistent with recent manikin studies using this device. © 2014 The Association of Anaesthetists of Great Britain and Ireland.

  6. Information Retrieval Techniques.

    ERIC Educational Resources Information Center

    Kantor, Paul B.

    1994-01-01

    Identifies current trends in the automation of indexing, of information retrieval, and of interaction between the system and the users. Topics discussed include location, navigation, and indexing; digital libraries; matching documents to queries; weight of concepts; query structure, including fuzzy sets; algorithms; stemming; clustering; users'…

  7. Information Retrieval in Physics.

    ERIC Educational Resources Information Center

    Herschman, Arthur

    Discussed in this paper are the information problems in physics and the current program of the American Institute of Physics (AIP) being conducted in an attempt to develop an information retrieval system. The seriousness of the need is described by means of graphs indicating the exponential rise in the number of physics publications in the last…

  8. Information Retrieval by Television.

    ERIC Educational Resources Information Center

    Billowes, C. A.

    1968-01-01

    Bell Canada, the Public School and Collegiate Institute Boards of Ottawa, and the Ontario Institute for Studies in Education are collaborating on an educational television project which will provide a retrieval system that can supply any given program at any time under the control of the classroom teacher. Four schools in Ottawa will participate…

  9. Feedback in Information Retrieval.

    ERIC Educational Resources Information Center

    Spink, Amanda; Losee, Robert M.

    1996-01-01

    As Information Retrieval (IR) has evolved, it has become a highly interactive process, rooted in cognitive and situational contexts. Consequently the traditional cybernetic-based IR model does not suffice for interactive IR or the human approach to IR. Reviews different views of feedback in IR and their relationship to cybernetic and social…

  10. Music Information Retrieval.

    ERIC Educational Resources Information Center

    Downie, J. Stephen

    2003-01-01

    Identifies MIR (Music Information Retrieval) computer system problems, historic influences, current state-of-the-art, and future MIR solutions through an examination of the multidisciplinary approach to MIR. Highlights include pitch; temporal factors; harmonics; tone; editorial, textual, and bibliographic facets; multicultural factors; locating…

  11. Information Retrieval by Television.

    ERIC Educational Resources Information Center

    Billowes, C. A.

    1968-01-01

    Bell Canada, the Public School and Collegiate Institute Boards of Ottawa, and the Ontario Institute for Studies in Education are collaborating on an educational television project which will provide a retrieval system that can supply any given program at any time under the control of the classroom teacher. Four schools in Ottawa will participate…

  12. Adaptive MGS Phase Retrieval

    NASA Technical Reports Server (NTRS)

    Basinger, Scott A.; Bikkannavar, Siddarayappa; Cohen, David; Green, Joseph J.; Lou, John; Ohara, Catherine; Redding, David; Shi, Fang

    2008-01-01

    Adaptive MGS Phase Retrieval software uses the Modified Gerchberg-Saxton (MGS) algorithm, an image-based sensing method that can turn any focal plane science instrument into a wavefront sensor, avoiding the need to use external metrology equipment. Knowledge of the wavefront enables intelligent control of active optical systems.

  13. Collaborative Information Retrieval.

    ERIC Educational Resources Information Center

    Bruce, Harry; Fidel, Raya

    1999-01-01

    Researchers from the University of Washington, Microsoft Research, Boeing, and Risoe National Laboratory in Denmark have embarked on a project to explore the manifestations of Collaborative Information Retrieval (CIR) in work settings and to propose technological innovations and organizational changes that can support, facilitate, and improve CIR.…

  14. Multimedia Document Retrieval.

    ERIC Educational Resources Information Center

    Ozkarahan, Esen

    1995-01-01

    This study develops an integrated conceptual representation scheme for multimedia documents that are viewed to comprise an object-oriented database; the necessary abstractions for the conceptual model and extensions to the relational model used as the search structure; a retrieval model that includes associative, semantic and media-specific…

  15. Retrieval Hierarchies in Hypertext.

    ERIC Educational Resources Information Center

    Rada, Roy; And Others

    1993-01-01

    Describes a collaborative, reuse hypertext system, called MUCH (Many Using and Creating Hypertext). The novel browsing and retrieval characteristics of the system are based on a semantic net connecting documents, thesauri, and discussions. Word patterns are documented for reuse, creating and reorganizing network traversal according to user…

  16. Statistical Information Retrieval System.

    ERIC Educational Resources Information Center

    DiFondi, Nicholas M.

    An information retrieval system was developed using technical word occurrences as a basis for classification. A set of words, designated a vocabulary, was selected from the middle range of frequency listing of words occurring in an experimental sample of 94 documents. The selection produced 115 non-function words with technical definition that did…

  17. Indexing and retrieval strategies for natural language fact retrieval

    SciTech Connect

    Kolodner, J.L.

    1983-09-01

    Researchers in artificial intelligence have recently become interested in natural language fact retrieval; currently, their research is at a point where it can begin contributing to the field of information retrieval. In this paper, strategies for a natural language fact retrieval system are mapped out, and approaches to many of the organization and retrieval problems are presented. The CYRUS system, which keeps track of important people and is queried in English, is presented and used to illustrate those solutions. 30 references.

  18. Mobile medical image retrieval

    NASA Astrophysics Data System (ADS)

    Duc, Samuel; Depeursinge, Adrien; Eggel, Ivan; Müller, Henning

    2011-03-01

    Images are an integral part of medical practice for diagnosis, treatment planning and teaching. Image retrieval has gained in importance mainly as a research domain over the past 20 years. Both textual and visual retrieval of images are essential. In the process of mobile devices becoming reliable and having a functionality equaling that of formerly desktop clients, mobile computing has gained ground and many applications have been explored. This creates a new field of mobile information search & access and in this context images can play an important role as they often allow understanding complex scenarios much quicker and easier than free text. Mobile information retrieval in general has skyrocketed over the past year with many new applications and tools being developed and all sorts of interfaces being adapted to mobile clients. This article describes constraints of an information retrieval system including visual and textual information retrieval from the medical literature of BioMedCentral and of the RSNA journals Radiology and Radiographics. Solutions for mobile data access with an example on an iPhone in a web-based environment are presented as iPhones are frequently used and the operating system is bound to become the most frequent smartphone operating system in 2011. A web-based scenario was chosen to allow for a use by other smart phone platforms such as Android as well. Constraints of small screens and navigation with touch screens are taken into account in the development of the application. A hybrid choice had to be taken to allow for taking pictures with the cell phone camera and upload them for visual similarity search as most producers of smart phones block this functionality to web applications. Mobile information access and in particular access to images can be surprisingly efficient and effective on smaller screens. Images can be read on screen much faster and relevance of documents can be identified quickly through the use of images contained in

  19. Evaluation of migration forces of a retrievable filter: experimental setup and finite element study.

    PubMed

    García, A; Lerga, S; Peña, E; Malve, M; Laborda, A; De Gregorio, M A; Martínez, M A

    2012-10-01

    The aim of this paper is to provide a computational study of migration forces of a retrievable filter (Günther Tulip inferior vena cava filter). Using an experimental setup and finite element simulation, the migration forces and stress at the end of the anchored hooks in the struts were estimated. After that, the estimation value of migration stress (τ(rup)) was used to analyze the effect of different mechanical factors (strut thickness, vena cava diameter) in the migration of the IVC filter. Our results show that the migration stress is τ(rup)=4.37 N/mm(2). Using this value we obtain that the filter with higher strut diameter (ϕ(strut)=0.45 mm) shows the maximal migration forces in every cava diameter. On the other hand, the value of the migration force decreases when the cava diameter increases. In addition, the finite element simulations also show that there are contact between the struts of the filter and the vein in regions close to the anchors.

  20. Language Processing in Information Retrieval.

    ERIC Educational Resources Information Center

    Doszkocs, Tamase

    1986-01-01

    Examines role and contributions of natural-language processing in information retrieval and artificial intelligence research in context of large operational information retrieval systems and services. State-of-the-art information retrieval systems combining the functional capabilities of conventional inverted file term adjacency approach with…

  1. Memory Retrieval as Temporal Discrimination

    ERIC Educational Resources Information Center

    Brown, Gordon D. A.; Vousden, Janet I.; McCormack, Teresa

    2009-01-01

    Temporal distinctiveness models of memory retrieval claim that memories are organised partly in terms of their positions along a temporal dimension, and suggest that memory retrieval involves temporal discrimination. According to such models the retrievability of memories should be related to the discriminability of their temporal distances at the…

  2. A Visual Information Retrieval Tool.

    ERIC Educational Resources Information Center

    Zhang, Jin

    2000-01-01

    Discussion of visualization for information retrieval, that transforms unseen internal semantic representation of a document collection into visible geometric displays, focuses on DARE (Distance Angle Retrieval Environment). Highlights include expression of information need; interpretation and manipulation of information retrieval models; ranking…

  3. EFFECTIVENESS OF INFORMATION RETRIEVAL METHODS.

    ERIC Educational Resources Information Center

    SWETS, JOHN A.

    RESULTS OF FIFTY DIFFERENT RETRIEVAL METHODS AS APPLIED IN THREE EXPERIMENTAL RETRIEVAL SYSTEMS WERE SUBJECTED TO AN ANALYSIS SUGGESTED BY STATISTICAL DECISION THEORY. THE ANALYSIS USES A PREVIOUSLY-PROPOSED MEASURE OF EFFECTIVENESS AND DEMONSTRATES ITS SEVERAL PROPERTIES. SOME OF THESE PROPERTIES ARE--(1) IT ENABLES THE RETRIEVAL SYSTEM TO…

  4. Practical quantum retrieval games

    NASA Astrophysics Data System (ADS)

    Arrazola, Juan Miguel; Karasamanis, Markos; Lütkenhaus, Norbert

    2016-06-01

    Complex cryptographic protocols are often constructed from simpler building blocks. In order to advance quantum cryptography, it is important to study practical building blocks that can be used to develop new protocols. An example is quantum retrieval games (QRGs), which have broad applicability and have already been used to construct quantum money schemes. In this work, we introduce a general construction of quantum retrieval games based on the hidden matching problem and show how they can be implemented in practice using available technology. More precisely, we provide a general method to construct (1-out-of-k ) QRGs, proving that their cheating probabilities decrease exponentially in k . In particular, we define QRGs based on coherent states of light, which can be implemented even in the presence of experimental imperfections. Our results constitute a tool in the arsenal of the practical quantum cryptographer.

  5. Initial retrieval shields against retrieval-induced forgetting.

    PubMed

    Racsmány, Mihály; Keresztes, Attila

    2015-01-01

    Testing, as a form of retrieval, can enhance learning but it can also induce forgetting of related memories, a phenomenon known as retrieval-induced forgetting (RIF). In four experiments we explored whether selective retrieval and selective restudy of target memories induce forgetting of related memories with or without initial retrieval of the entire learning set. In Experiment 1, subjects studied category-exemplar associations, some of which were then either restudied or retrieved. RIF occurred on a delayed final test only when memories were retrieved and not when they were restudied. In Experiment 2, following the study phase of category-exemplar associations, subjects attempted to recall all category-exemplar associations, then they selectively retrieved or restudied some of the exemplars. We found that, despite the huge impact on practiced items, selective retrieval/restudy caused no decrease in final recall of related items. In Experiment 3, we replicated the main result of Experiment 2 by manipulating initial retrieval as a within-subject variable. In Experiment 4 we replicated the main results of the previous experiments with non-practiced (Nrp) baseline items. These findings suggest that initial retrieval of the learning set shields against the forgetting effect of later selective retrieval. Together, our results support the context shift theory of RIF.

  6. REMOTE RETRIEVING TOOL

    DOEpatents

    Fromm, L.W. Jr.

    1958-08-19

    A retrieving tool is described to securely grasp an object for emplacement in, or withdrawal from, an elongated tube. The object is grasped by hooks actuated by a wedge and cann mechanism. The mechanism on the end of a long rodlike structure is controlled by levers or bars at the access end of the tube. This device is particularly useful for positioning fuel elements within a reactor core.

  7. Passage Retrieval and Evaluation

    DTIC Science & Technology

    2005-02-01

    queries, is IDF(t) = log „ # docs. in corpus + 1 0.5 + # docs. t appears in « . (6) This rather ad hoc scoring formula is implemented in the Lemur ...problems with passage R-precision as an evaluation metric. Fernando was instrumental in extending the Lemur toolkit to make all of these experiments...and C. Zhai. The lemur toolkit for language modeling and information retrieval. http://www.cs.cmu.edu/∼ lemur /, 2003. [6] C. Buckley and E. M

  8. Retrievable Inferior Vena Cava Filters: Factors that Affect Retrieval Success

    SciTech Connect

    Geisbuesch, Philipp Benenati, James F.; Pena, Constantino S.; Couvillon, Joseph; Powell, Alex; Gandhi, Ripal; Samuels, Shaun; Uthoff, Heiko

    2012-10-15

    Purpose: To report and analyze the indications, procedural success, and complications of retrievable inferior vena cava filters (rIVCF) placement and to identify parameters that influence retrieval attempt and failure. Methods: Between January 2005 and December 2010, a total of 200 patients (80 men, median age 67 years, range 11-95 years) received a rIVCF with the clinical possibility that it could be removed. All patients with rIVCF were prospectively entered into a database and followed until retrieval or a decision not to retrieve the filter was made. A retrospective analysis of this database was performed. Results: Sixty-one percent of patients had an accepted indication for filter placement; 39% of patients had a relative indication. There was a tendency toward a higher retrieval rate in patients with relative indications (40% vs. 55%, P = 0.076). Filter placement was technically successful in all patients, with no procedure-related mortality. The retrieval rate was 53%. Patient age of >80 years (odds ratio [OR] 0.056, P > 0.0001) and presence of malignancy (OR 0.303, P = 0.003) was associated with a significantly reduced probability for attempted retrieval. Retrieval failure occurred in 7% (6 of 91) of all retrieval attempts. A time interval of > 90 days between implantation and attempted retrieval was associated with retrieval failure (OR 19.8, P = 0.009). Conclusions: Patient age >80 years and a history of malignancy are predictors of a reduced probability for retrieval attempt. The rate of retrieval failure is low and seems to be associated with a time interval of >90 days between filter placement and retrieval.

  9. Rapid stalk elongation in tulip (Tulipa gesneriana L. cv. Apeldoorn) and the combined action of cold-induced invertase and the water-channel protein gammaTIP.

    PubMed

    Balk, P A; de Boer, A D

    1999-09-01

    Many bulbous plants need a low-temperature treatment for flowering. Cold, for example, affects the elongation of the stalk, thereby influencing the quality of the cut flower. How the elongation of the stalk is promoted by cold and which physiological and biochemical mechanisms are involved have remained obscure. As invertase has been shown to be involved in the cold-induced elongation of the flower stalks of tulips (Lambrechts et al., 1994, Plant Physiol 104: 515-520), we further characterized this enzyme by cloning the cDNA and analysing its expression in various tissues of the tulip (Tulipa gesneriana L. cv. Apeldoorn) stalk. In addition, the role of sucrose synthase was investigated. Since turgor pressure is an important force driving cell elongation, the role of a water-channel protein (gammaTIP) was studied in relation to these two enzymes. The mRNA level of the invertase found was substantially up-regulated as a result of cold treatment. Analysis of the amino acid sequence of this invertase revealed the presence of a vacuolar targeting signal. Two different forms of sucrose synthase were found, the expression of one of them appeared to be restricted to the vascular tissue while the other form was present in the surrounding tissue. Both sucrose synthases were present in the stalk during the entire period of bulb storage and after planting, but their activities declined during stalk elongation. The expression of the gammaTIP gene was restricted mainly to the vascular tissue and its expression profile was identical to that of invertase. Simultaneous expression of invertase and gammaTIP possibly leads to an increase in osmotic potential and vacuolar water uptake, thus providing a driving force for stretching the stalk cells.

  10. Commentary: County of Washington v. Gunther.

    ERIC Educational Resources Information Center

    Buckley, Nancy C.

    1981-01-01

    In court litigation in which women prison guards' claim of pay discrimination was rejected at the local level, the Supreme Court ruled that the case could be debated based on workers'"comparable worth" instead of "equal work," the traditional argument. Further litigation on the comparable worth issue is anticipated. (MSE)

  11. Music retrieval in ICOR

    NASA Astrophysics Data System (ADS)

    Finsterle, Lutz; Fischer, Stephan; Rimac, Ivica; Steinmetz, Ralf

    1999-08-01

    In this paper we describe music retrieval in ICOR, a project of Darmstadt TU. It is the goal of ICOR to find new interfaces to support applications of music video and music CDs. Although the project consists of audio and video analysis we concentrate on a description of the audio algorithms in this paper. We describe our MPEG-7 like data structure to store meta information for music pieces and explain which algorithms we use to analyze the content of music pieces automatically. We currently use an applause detection to distinguish live music from studio recordings, a genre classifier to distinguish pieces with beats form classical music, and a singer recognition.

  12. 2. VIEW OF INTERIOR OF XY RETRIEVER. THE XY RETRIEVER ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. VIEW OF INTERIOR OF X-Y RETRIEVER. THE X-Y RETRIEVER WAS HOUSED IN MODULE K AND WAS USED TO SORT AND RETRIEVE PLUTONIUM METAL FROM A STORAGE VAULT FOR DISTRIBUTION TO OTHER PROCESSES IN BUILDING 707. (11/29/88) - Rocky Flats Plant, Plutonium Manufacturing Facility, North-central section of Plant, just south of Building 776/777, Golden, Jefferson County, CO

  13. The Text Retrieval Conferences (TRECs)

    DTIC Science & Technology

    1996-05-01

    Retrieval and Routing Using the INQUERY System" by John Broglio, James P. Callan, W. Bruce Croft and Daniel W. Nachbar) used a version of...University of Massachusetts at Amherst ("Document Retrieval and Routing Using the INQUERY System" by John Broglio, James P. Callan, W. Bruce Croft...342 terms were used. SIN002, SINOOI -- University of Massachusetts at Amherst ("Document Retrieval and Routing Using the INQUERY System" by John

  14. EM-21 Retrieval Knowledge Center: Waste Retrieval Challenges

    SciTech Connect

    Fellinger, Andrew P.; Rinker, Michael W.; Berglin, Eric J.; Minichan, Richard L.; Poirier, Micheal R.; Gauglitz, Phillip A.; Martin, Bruce A.; Hatchell, Brian K.; Saldivar, Eloy; Mullen, O Dennis; Chapman, Noel F.; Wells, Beric E.; Gibbons, Peter W.

    2009-04-10

    EM-21 is the Waste Processing Division of the Office of Engineering and Technology, within the U.S. Department of Energy’s (DOE) Office of Environmental Management (EM). In August of 2008, EM-21 began an initiative to develop a Retrieval Knowledge Center (RKC) to provide the DOE, high level waste retrieval operators, and technology developers with centralized and focused location to share knowledge and expertise that will be used to address retrieval challenges across the DOE complex. The RKC is also designed to facilitate information sharing across the DOE Waste Site Complex through workshops, and a searchable database of waste retrieval technology information. The database may be used to research effective technology approaches for specific retrieval tasks and to take advantage of the lessons learned from previous operations. It is also expected to be effective for remaining current with state-of-the-art of retrieval technologies and ongoing development within the DOE Complex. To encourage collaboration of DOE sites with waste retrieval issues, the RKC team is co-led by the Savannah River National Laboratory (SRNL) and the Pacific Northwest National Laboratory (PNNL). Two RKC workshops were held in the Fall of 2008. The purpose of these workshops was to define top level waste retrieval functional areas, exchange lessons learned, and develop a path forward to support a strategic business plan focused on technology needs for retrieval. The primary participants involved in these workshops included retrieval personnel and laboratory staff that are associated with Hanford and Savannah River Sites since the majority of remaining DOE waste tanks are located at these sites. This report summarizes and documents the results of the initial RKC workshops. Technology challenges identified from these workshops and presented here are expected to be a key component to defining future RKC-directed tasks designed to facilitate tank waste retrieval solutions.

  15. Semantic processing in information retrieval.

    PubMed Central

    Rindflesch, T. C.; Aronson, A. R.

    1993-01-01

    Intuition suggests that one way to enhance the information retrieval process would be the use of phrases to characterize the contents of text. A number of researchers, however, have noted that phrases alone do not improve retrieval effectiveness. In this paper we briefly review the use of phrases in information retrieval and then suggest extensions to this paradigm using semantic information. We claim that semantic processing, which can be viewed as expressing relations between the concepts represented by phrases, will in fact enhance retrieval effectiveness. The availability of the UMLS domain model, which we exploit extensively, significantly contributes to the feasibility of this processing. PMID:8130547

  16. Tracking through the Tulips

    ERIC Educational Resources Information Center

    Davis, Dorothy

    2005-01-01

    In the fall of 2002, teachers at the author's school were expressing interest in finding new ways to teach science as inquiry--and she was looking for an interesting plant inquiry for second-grade students. That November, She attended a Journey North workshop at the Tennessee Science Teachers Association convention and had an "a-ha"…

  17. Tracking through the Tulips

    ERIC Educational Resources Information Center

    Davis, Dorothy

    2005-01-01

    In the fall of 2002, teachers at the author's school were expressing interest in finding new ways to teach science as inquiry--and she was looking for an interesting plant inquiry for second-grade students. That November, She attended a Journey North workshop at the Tennessee Science Teachers Association convention and had an "a-ha"…

  18. NASA develops teleoperator retrieval system

    NASA Technical Reports Server (NTRS)

    1978-01-01

    The teleoperator retrieval system vehicle was designed to reboost and/or deorbit the Skylab; however, usefulness in survey, stabilization, retrieval and delivery was examined. Thrusters, designed for cold gas propulsion, were adapted to hydrazine propulsion. Design specifications and cost analysis are given.

  19. Retrieval Effectiveness on the Web.

    ERIC Educational Resources Information Center

    Savoy, Jacques; Picard, Justin

    2001-01-01

    Discusses the role of search engines in Web usability and analyzes and evaluates the retrieval effectiveness of various indexing and searching strategies on a new Web text collection. Highlights include preprocessing techniques that might improve retrieval effectiveness; and hyperlinks as useful sources of evidence in improving retrieval…

  20. Organizing, Indexing, and Retrieving Information.

    ERIC Educational Resources Information Center

    Fidel, Raya

    1989-01-01

    Reviews the literature that examines new capabilities and new problems associated with online catalogs, online searching of bibliographic databases, indexing, full text retrieval, and expert systems. The need for research that focuses on individual needs and that adopts an integrated approach which views indexing and retrieval as interrelated…

  1. Indexing Depth and Retrieval Effectiveness

    ERIC Educational Resources Information Center

    Seely, Barbara J.

    1972-01-01

    There are six major studies of the effect of indexing depth on retrieval performance. They differ in purpose, methodology, measures, indexing language, field of study, and data base--nevertheless, all have found depth of indexing to have the same effect upon information retrieval. (13 references) (Author/NH)

  2. Student Attitude Toward Information Retrieval.

    ERIC Educational Resources Information Center

    Adair, Charles H.; Allen, Rodney F.

    This is an individually administered rating scale designed to evaluate teacher trainee attitudes toward an information retrieval system. A major goal of the scale is to seek responses that measure students' reactions to the cognitive interest and motivational nature of the information retrieval system through the use of Likert-type items. The…

  3. Vocabulary Control for Information Retrieval.

    ERIC Educational Resources Information Center

    Lancaster, F. W.

    This book deals with properties of vocabularies for indexing and searching document collections; the construction, organization, display, and maintenance of these vocabularies; and the vocabulary as a factor affecting the performance of retrieval systems. Most of the text is concerned with vocabularies for post-coordinate retrieval systems, with…

  4. Topology of Document Retrieval Systems.

    ERIC Educational Resources Information Center

    Everett, Daniel M.; Cater, Steven C.

    1992-01-01

    Explains the use of a topological structure to examine the closeness between documents in retrieval systems and analyzes the topological structure of a vector-space model, a fuzzy-set model, an extended Boolean model, a probabilistic model, and a TIRS (Topological Information Retrieval System) model. Proofs for the results are appended. (17…

  5. Passage Retrieval: A Probabilistic Technique.

    ERIC Educational Resources Information Center

    Melucci, Massimo

    1998-01-01

    Presents a probabilistic technique to retrieve passages from texts having a large size or heterogeneous semantic content. Results of experiments comparing the probabilistic technique to one based on a text segmentation algorithm revealed that the passage size affects passage retrieval performance; text organization and query generality may have an…

  6. Detecting Mood-Dependent Retrieval.

    ERIC Educational Resources Information Center

    Mayer, John D.; Bower, Gordon H.

    The mood-dependent retrieval hypothesis states that mood will enhance recall by acting as a recall cue if the stimuli have been learned initially in the same mood. Material learned in a happy mood will be best recalled when the person returns to a happy mood; the same holds for a sad mood. Mood-dependent retrieval effect has been regulary…

  7. Intelligent Information Retrieval: An Introduction.

    ERIC Educational Resources Information Center

    Gauch, Susan

    1992-01-01

    Discusses the application of artificial intelligence to online information retrieval systems and describes several systems: (1) CANSEARCH, from MEDLINE; (2) Intelligent Interface for Information Retrieval (I3R); (3) Gausch's Query Reformulation; (4) Environmental Pollution Expert (EP-X); (5) PLEXUS (gardening); and (6) SCISOR (corporate…

  8. Team 2: AIRS Only Retrieval

    NASA Technical Reports Server (NTRS)

    Lee, Sung-Yung; Manning, Evan; Blaisdell, John; Susskind, Joel; Barnet, Chris; Goldberg, Mitch; Cho, Chuck; Staelin, Dave; Blackwelll, Bill

    2005-01-01

    This slide presentation makes the case for the retrieval of data from the Atmospheric Infrared Sounder (AIRS) Advanced Microwave Sounding Unit (AMSU). AIRS only retrieval is not only a risk reduction for failure of AMSU, but also important because NWP centers are reluctant to assimilate AMSU twice.

  9. Research by retrieving experiments.

    PubMed

    Blagosklonny, Mikhail V

    2007-06-01

    Newton did not discover that apples fall: the information was available prior to his gravitational hypothesis. Hypotheses can be tested not only by performing experiments but also by retrieving experiments from the literature (via PubMed, for example). Here I show how disconnected facts from known data, if properly connected, can generate novel predictions testable in turn by other published data. With examples from cell cycle, aging, cancer and other fields of biology and medicine, I discuss how new knowledge was and will be derived from old information. Millions of experiments have been already performed to test unrelated hypotheses and the results of those experiments are available to 'test' your hypotheses too. But most data (99% by some estimates) remain unpublished, because they were negative, seemed of low priority, or did not fit the story. Yet for other investigators those data may be valuable. The well-known story of Franklin and Watson is a case in point. By making preliminary data widely available, 'data-owners' will benefit most, receiving the credit for otherwise unused results. If posted (pre-published) on searchable databases, these data may fuel thousands of projects without the need for repetitive experiments. Enormous 'pre-published' databases coupled with Google-like search engines can change the structure of scientific research, and shrinking funding will make this inevitable.

  10. Web Mining for Web Image Retrieval.

    ERIC Educational Resources Information Center

    Chen, Zheng; Wenyin, Liu; Zhang, Feng; Li, Mingjing; Zhang, Hongjiang

    2001-01-01

    Presents a prototype system for image retrieval from the Internet using Web mining. Discusses the architecture of the Web image retrieval prototype; document space modeling; user log mining; and image retrieval experiments to evaluate the proposed system. (AEF)

  11. Web Mining for Web Image Retrieval.

    ERIC Educational Resources Information Center

    Chen, Zheng; Wenyin, Liu; Zhang, Feng; Li, Mingjing; Zhang, Hongjiang

    2001-01-01

    Presents a prototype system for image retrieval from the Internet using Web mining. Discusses the architecture of the Web image retrieval prototype; document space modeling; user log mining; and image retrieval experiments to evaluate the proposed system. (AEF)

  12. Solid rocket booster retrieval operations

    NASA Technical Reports Server (NTRS)

    Rasmussen, A. M.

    1985-01-01

    Solid Rocket Booster Retrieval operations are discussed in detail. The recovery of expended boosters and associated hardware without damage attributable to retrieval procedures is the main goal. The retrieval force consists tof ship's personnel and retrieval team members, each of whom has been trained and is highly skilled in multi-faceted operations. The retrieval force is equipped with two specially-built, highly maneuverable ships outfitted with parachute reels, retrieval cranes, towing winches, large volume-low pressure air compressors, SCUBA diving gear, inflatable boats with outboard motors and diver-operated SRB dewatering devices. The two ships are deployed in sufficient time to conduct an electronic and visual search of the impact area prior to launch. Upon search completeion, each ship takes station a safe distance from the predetermined impact point initiating both visual and electronic search in the direction of flight path, ensuring SRB acquisition at splashdown. When safe, the ships enter the impact area and commence recovery of all floating flight hardware which is subsequently returned to the Disassembly Facility for refurbishment and reuse. Retrieval techniques have evolved in parallel with equipment and flight hardware configuration changes. Additional changes have been initiated to improve personnel safety.

  13. Mobile medical visual information retrieval.

    PubMed

    Depeursinge, Adrien; Duc, Samuel; Eggel, Ivan; Müller, Henning

    2012-01-01

    In this paper, we propose mobile access to peer-reviewed medical information based on textual search and content-based visual image retrieval. Web-based interfaces designed for limited screen space were developed to query via web services a medical information retrieval engine optimizing the amount of data to be transferred in wireless form. Visual and textual retrieval engines with state-of-the-art performance were integrated. Results obtained show a good usability of the software. Future use in clinical environments has the potential of increasing quality of patient care through bedside access to the medical literature in context.

  14. System For Retrieving Reusable Software

    NASA Technical Reports Server (NTRS)

    Van Warren, Lloyd; Beckman, Brian C.

    1993-01-01

    Encyclopedia of Software Components (ESC) is information-retrieval system of computer hardware and software providing access to generic reusable software tools and parts. Core of ESC is central tool base, which is repository of reusable software. It receives queries and submissions from user through local browser subsystem and receives authorized updates from maintenance subsystem. Sends retrievals to local browser subsystem and user's submissions to maintenance subsystem. Future versions will provide for advanced media, including voice and video, and will link system to database-management system. Programmers will not only retrieve software, but also modify, execute, and cross-link with other software.

  15. Automatic Classification in Information Retrieval.

    ERIC Educational Resources Information Center

    van Rijsbergen, C. J.

    1978-01-01

    Addresses the application of automatic classification methods to the problems associated with computerized document retrieval. Different kinds of classifications are described, and both document and term clustering methods are discussed. References and notes are provided. (Author/JD)

  16. Homology of SMP domains to the TULIP superfamily of lipid-binding proteins provides a structural basis for lipid exchange between ER and mitochondria.

    PubMed

    Kopec, Klaus O; Alva, Vikram; Lupas, Andrei N

    2010-08-15

    Mitochondria must uptake some phospholipids from the endoplasmic reticulum (ER) for the biogenesis of their membranes. They convert one of these lipids, phosphatidylserine, to phosphatidylethanolamine, which can be re-exported via the ER to all other cellular membranes. The mechanisms underlying these exchanges between ER and mitochondria are poorly understood. Recently, a complex termed ER-mitochondria encounter structure (ERMES) was shown to be necessary for phospholipid exchange in budding yeast. However, it is unclear whether this complex is merely an inter-organelle tether or also the transporter. ERMES consists of four proteins: Mdm10, Mdm34 (Mmm2), Mdm12 and Mmm1, three of which contain the uncharacterized SMP domain common to a number of eukaryotic membrane-associated proteins. Here, we show that the SMP domain belongs to the TULIP superfamily of lipid/hydrophobic ligand-binding domains comprising members of known structure. This relationship suggests that the SMP domains of the ERMES complex mediate lipid exchange between ER and mitochondria.

  17. Homology of SMP domains to the TULIP superfamily of lipid-binding proteins provides a structural basis for lipid exchange between ER and mitochondria

    PubMed Central

    Kopec, Klaus O.; Alva, Vikram; Lupas, Andrei N.

    2010-01-01

    Mitochondria must uptake some phospholipids from the endoplasmic reticulum (ER) for the biogenesis of their membranes. They convert one of these lipids, phosphatidylserine, to phosphatidylethanolamine, which can be re-exported via the ER to all other cellular membranes. The mechanisms underlying these exchanges between ER and mitochondria are poorly understood. Recently, a complex termed ER–mitochondria encounter structure (ERMES) was shown to be necessary for phospholipid exchange in budding yeast. However, it is unclear whether this complex is merely an inter-organelle tether or also the transporter. ERMES consists of four proteins: Mdm10, Mdm34 (Mmm2), Mdm12 and Mmm1, three of which contain the uncharacterized SMP domain common to a number of eukaryotic membrane-associated proteins. Here, we show that the SMP domain belongs to the TULIP superfamily of lipid/hydrophobic ligand-binding domains comprising members of known structure. This relationship suggests that the SMP domains of the ERMES complex mediate lipid exchange between ER and mitochondria. Contact: andrei.lupas@tuebingen.mpg.de Supplementary information: Supplementary data are available at Bioinformatics online. PMID:20554689

  18. Purification, characterization, and sequencing of novel antimicrobial peptides, Tu-AMP 1 and Tu-AMP 2, from bulbs of tulip (Tulipa gesneriana L.).

    PubMed

    Fujimura, Masatoshi; Ideguchi, Mineo; Minami, Yuji; Watanabe, Keiichi; Tadera, Kenjiro

    2004-03-01

    Novel antimicrobial peptides (AMP), designated Tu-AMP 1 and Tu-AMP 2, were purified from the bulbs of tulip (Tulipa gesneriana L.) by chitin affinity chromatography and reverse-phase high-performance liquid chromatography (HPLC). They bind to chitin in a reversible way. They were basic peptides having isoelectric points of over 12. Tu-AMP 1 and Tu-AMP 2 had molecular masses of 4,988 Da and 5,006 Da on MALDI-TOF MS analysis, and their extinction coefficients of 1% aqueous solutions at 280 nm were 3.3 and 3.4, respectively. Half of all amino acid residues of Tu-AMP 1 and Tu-AMP 2 were occupied by cysteine, arginine, lysine, and proline. The concentrations of peptides required for 50% inhibition (IC(50)) of the growth of plant pathogenic bacteria and fungi were 2 to 20 microg/ml. The structural characteristics of Tu-AMP 1 and Tu-AMP 2 indicated that they were novel thionin-like antimicrobial peptides, though Tu-AMP 2 was a heterodimer composes of two short peptides joined with disulfide bonds.

  19. Active optics and the axisymmetric case: MINITRUST wide-field three-reflection telescopes with mirrors aspherized from tulip and vase forms

    NASA Astrophysics Data System (ADS)

    Lemaitre, Gerard R.; Montiel, Pierre; Joulie, Patrice; Dohlen, Kjetil; Lanzoni, Patrick

    2004-09-01

    Wide-field astronomy requires larger size telescopes. Compared to the catadioptric Schmidt, the optical properties of a three mirror telescope provides significant advantages. (1) The flat field design is anastigmatic at any wavelength, (2) the system is extremely compact -- four times shorter than a Schmidt -- and, (3) compared to a Schmidt with refractive corrector -- requiring the polishing of three optical surfaces --, the presently proposed Modified-Rumsey design uses all of eight available free parameters of a flat fielded anastigmatic three mirror telescope for mirrors generated by active optics methods. Compared to a Rumsey design, these parameters include the additional slope continuity condition at the primary-tertiary link for in-situ stressing and aspherization from a common sphere. Then, active optics allows the polishing of only two spherical surfaces: the combined primary-tertiary mirror and the secondary mirror. All mirrors are spheroids of the hyperboloid type. This compact system is of interest for space and ground-based astronomy and allows to built larger wide-field telescopes such as demonstrated by the design and construction of identical telescopes MINITRUST-1 and -2, f/5 - 2° FOV, consisting of an in-situ stressed double vase form primary-tertiary and of a stress polished tulip form secondary. Optical tests of these telescopes, showing diffraction limited images, are presented.

  20. Below-ground plant parts emit herbivore-induced volatiles: olfactory responses of a predatory mite to tulip bulbs infested by rust mites.

    PubMed

    Aratchige, N S; Lesna, I; Sabelis, M W

    2004-01-01

    Although odour-mediated interactions among plants, spider mites and predatory mites have been extensively studied above-ground, belowground studies are in their infancy. In this paper, we investigate whether feeding by rust mites (Aceria tulipae) cause tulip bulbs to produce odours that attract predatory mites (Neoseiulus cucumeris). Since our aim was to demonstrate such odours and not their relevance under soil conditions, the experiments were carried out using a classic Y-tube olfactometer in which the predators moved on a Y-shaped wire in open air. We found that food-deprived female predators can discriminate between odours from infested bulbs and odours from uninfested bulbs or artificially wounded bulbs. No significant difference in attractiveness to predators was found between clean bulbs and bulbs either wounded 30 min or 3 h before the experiment. These results indicate that it may not be simply the wounding of the bulbs, but rather the feeding by rust mites, which causes the bulb to release odours that attract N. cucumeris. Since bulbs are belowground plant structures, the olfactometer results demonstrate the potential for odour-mediated interactions in the soil. However, their importance in the actual soil medium remains to be demonstrated.

  1. Elaborative Retrieval: Do Semantic Mediators Improve Memory?

    ERIC Educational Resources Information Center

    Lehman, Melissa; Karpicke, Jeffrey D.

    2016-01-01

    The elaborative retrieval account of retrieval-based learning proposes that retrieval enhances retention because the retrieval process produces the generation of semantic mediators that link cues to target information. We tested 2 assumptions that form the basis of this account: that semantic mediators are more likely to be generated during…

  2. Elaborative Retrieval: Do Semantic Mediators Improve Memory?

    ERIC Educational Resources Information Center

    Lehman, Melissa; Karpicke, Jeffrey D.

    2016-01-01

    The elaborative retrieval account of retrieval-based learning proposes that retrieval enhances retention because the retrieval process produces the generation of semantic mediators that link cues to target information. We tested 2 assumptions that form the basis of this account: that semantic mediators are more likely to be generated during…

  3. The role of retrieval mode and retrieval orientation in retrieval practice: insights from comparing recognition memory testing formats and restudying.

    PubMed

    Gao, Chuanji; Rosburg, Timm; Hou, Mingzhu; Li, Bingbing; Xiao, Xin; Guo, Chunyan

    2016-12-01

    The effectiveness of retrieval practice for aiding long-term memory, referred to as the testing effect, has been widely demonstrated. However, the specific neurocognitive mechanisms underlying this phenomenon remain unclear. In the present study, we sought to explore the role of pre-retrieval processes at initial testing on later recognition performance by using event-related potentials (ERPs). Subjects studied two lists of words (Chinese characters) and then performed a recognition task or a source memory task, or restudied the word lists. At the end of the experiment, subjects received a final recognition test based on the remember-know paradigm. Behaviorally, initial testing (active retrieval) enhanced memory retention relative to restudying (passive retrieval). The retrieval mode at initial testing was indexed by more positive-going ERPs for unstudied items in the active-retrieval tasks than in passive retrieval from 300 to 900 ms. Follow-up analyses showed that the magnitude of the early ERP retrieval mode effect (300-500 ms) was predictive of the behavioral testing effect later on. In addition, the ERPs for correctly rejected new items during initial testing differed between the two active-retrieval tasks from 500 to 900 ms, and this ERP retrieval orientation effect predicted differential behavioral testing gains between the two active-retrieval conditions. Our findings confirm that initial testing promotes later retrieval relative to restudying, and they further suggest that adopting pre-retrieval processing in the forms of retrieval mode and retrieval orientation might contribute to these memory enhancements.

  4. Temporal structure in associative retrieval

    PubMed Central

    Kurth-Nelson, Zeb; Barnes, Gareth; Sejdinovic, Dino; Dolan, Ray; Dayan, Peter

    2015-01-01

    Electrophysiological data disclose rich dynamics in patterns of neural activity evoked by sensory objects. Retrieving objects from memory reinstates components of this activity. In humans, the temporal structure of this retrieved activity remains largely unexplored, and here we address this gap using the spatiotemporal precision of magnetoencephalography (MEG). In a sensory preconditioning paradigm, 'indirect' objects were paired with 'direct' objects to form associative links, and the latter were then paired with rewards. Using multivariate analysis methods we examined the short-time evolution of neural representations of indirect objects retrieved during reward-learning about direct objects. We found two components of the evoked representation of the indirect stimulus, 200 ms apart. The strength of retrieval of one, but not the other, representational component correlated with generalization of reward learning from direct to indirect stimuli. We suggest the temporal structure within retrieved neural representations may be key to their function. DOI: http://dx.doi.org/10.7554/eLife.04919.001 PMID:25615722

  5. Intelligent web image retrieval system

    NASA Astrophysics Data System (ADS)

    Hong, Sungyong; Lee, Chungwoo; Nah, Yunmook

    2001-07-01

    Recently, the web sites such as e-business sites and shopping mall sites deal with lots of image information. To find a specific image from these image sources, we usually use web search engines or image database engines which rely on keyword only retrievals or color based retrievals with limited search capabilities. This paper presents an intelligent web image retrieval system. We propose the system architecture, the texture and color based image classification and indexing techniques, and representation schemes of user usage patterns. The query can be given by providing keywords, by selecting one or more sample texture patterns, by assigning color values within positional color blocks, or by combining some or all of these factors. The system keeps track of user's preferences by generating user query logs and automatically add more search information to subsequent user queries. To show the usefulness of the proposed system, some experimental results showing recall and precision are also explained.

  6. Retrieval interference in sentence comprehension

    PubMed Central

    Van Dyke, Julie A.; McElree, Brian

    2007-01-01

    The role of interference effects in sentence processing has recently begun to receive attention, however whether these effects arise during encoding or retrieval remains unclear. This paper draws on basic memory research to help distinguish these explanations and reports data from an experiment that manipulates the possibility for retrieval interference while holding encoding conditions constant. We found clear support for the principle of cue-overload, wherein cues available at retrieval cannot uniquely distinguish among competitors, thus giving rise to interference effects. We discuss the data in relation to a cue-based parsing framework (Van Dyke & Lewis, 2003) and other interference effects observed in sentence processing (e.g., Gordon, Hendrick, & Johnson, 2001, 2004). We conclude from the available data that the memory system that subserves language comprehension operates according to similar principles as memory in other domains. PMID:18209744

  7. Multimedia Information Retrieval Literature Review

    SciTech Connect

    Wong, Pak C.; Bohn, Shawn J.; Payne, Deborah A.

    2010-10-12

    This survey paper highlights some of the recent, influential work in multimedia information retrieval (MIR). MIR is a branch area of multimedia (MM). The young and fast-growing area has received strong industrial and academic support in the United States and around the world (see Section 7 for a list of major conferences and journals of the community). The term "information retrieval" may be misleading to those with different computer science or information technology backgrounds. As shown in our discussion later, it indeed includes topics from user interaction, data analytics, machine learning, feature extraction, information visualization, and more.

  8. A Web Information Retrieval System

    NASA Astrophysics Data System (ADS)

    Kim, Tae-Hyun; Park, Dong-Chul; Huh, Woong; Kim, Hyen-Ug; Yoon, Chung-Hwa; Park, Chong-Dae; Woo, Dong-Min; Jeong, Taikyeong; Cho, Il-Hwan; Lee, Yunsik

    An approach for the retrieval of price information from internet sites is applied to real-world application problems in this paper. The Web Information Retrieval System (WIRS) utilizes Hidden Markov Model (HMM) for its powerful capability to process temporal information. HMM is an extremely flexible tool and has been successfully applied to a wide variety of stochastic modeling tasks. In order to compare the prices and features of products from various web sites, the WIRS extracts prices and descriptions of various products within web pages. The WIRS is evaluated with real-world problems and compared with a conventional method and the result is reported in this paper.

  9. Publication search and retrieval system

    USGS Publications Warehouse

    Winget, Elizabeth A.

    1981-01-01

    The publication search and retrieval system of the Branch of Atlantic-Gulf of Mexico Geology, U.S. Geological Survey, Woods Hole, Mass., is a procedure for listing and describing branch-sponsored publications. It is designed for maintenance and retrieval by those having limited knowledge of computer languages and programs. Because this branch currently utilizes the Hewlett-Packard HP-1000 computer with RTE-IVB operating system, database entry and maintenance is performed in accordance with the TE-IVB Terminal User’s Reference Manual (Hewlett-Packard Company, 1980) and within the constraints of GRASP (Bowen and Botbol, 1975) and WOLF (Evenden, 1978).

  10. Information retrieval for patient care.

    PubMed Central

    Gardner, M.

    1997-01-01

    Doctors need clinical information during most consultations with patients, and much of this need could be satisfied by material from online sources. Advances in data communication technologies mean that multimedia information can be transported rapidly to various clinical care locations. However, selecting the few items of information likely to be useful in a particular clinical situation from the mass of information available is a major problem. Current information retrieval systems are designed primarily for use in research rather than clinical care. The design, implementation, and critical evaluation of new information retrieval systems for clinical care should be guided by knowledgeable clinical users. PMID:9099122

  11. Text Passage Retrieval Based on Colon Classification: Retrieval Performance.

    ERIC Educational Resources Information Center

    Shepherd, Michael A.

    1981-01-01

    Reports the results of experiments using colon classification for the analysis, representation, and retrieval of primary information from the full text of documents. Recall, precision, and search length measures indicate colon classification did not perform significantly better than Boolean or simple word occurrence systems. Thirteen references…

  12. Flexible montage retrieval for image data

    NASA Astrophysics Data System (ADS)

    Sakamoto, Hiroaki; Suzuki, Hideharu; Uemori, Akira

    1994-04-01

    Academic and photo libraries require the reuse of images. If the database is large, similarity retrieval and retrieval by sketch are effective. However, similarity retrieval can retrieve images that are similar to only one key image. Retrieval by sketch can retrieve images that are similar to the sketch, but it is not always easy to make a sketch sufficiently similar to the desired image. To overcome these limitations, we propose a new flexible montage retrieval method (FMR) that allows the user to retrieve images by appropriately combining characteristics of the key images in the same way that a montage picture of a criminal is constructed. In FMR, the user selects one or more key images and specifies areas (called `key regions') manually or by using image manipulating tools. He then indicates the retrieval conditions, for example, the requirement that the image to be retrieved includes specified areas. This paper describes an FMR algorithm that uses a color histogram and texture to quantify the similarity between a key region and an image in the database. The effectiveness of FMR is then statistically demonstrated by comparing its correct retrieval rate with that of retrieval by sketch. The retrieval rate is calculated from the result of retrieving the images that include a specified sky image from among more than 150 images containing various sky images.

  13. Soft and Hard Tissue Changes around Tissue-Oriented Tulip-Design Implant Abutments: A 1-Year Randomized Prospective Clinical Trial.

    PubMed

    Gutmacher, Zvi; Levi, Guy; Blumenfeld, Israel; Machtei, Eli E

    2015-10-01

    The advantages of platform switching using narrower abutments remain controversial. Many researchers suggest that platform switching can yield enhanced clinical results, while others remain skeptical. We hypothesize that the effectiveness of platform switching might be associated with the degree of reduction in size of the abutment. To radiographically and clinically examine a new abutment design created to move the implant-abutment interface farther medially. This was a prospective, randomized controlled clinical trial that included 27 patients (41 MIS Lance Plus® implants; MIS Implant Technologies, Karmiel, Israel). The patients' age ranged from 39 to 75 years. At the second stage of the surgery, the implants were randomly assigned to either the new platform switch Tulip abutment (TA) design or to the standard platform abutment (SA). Implant probing depth (IPD) and bleeding on probing (BOP) were recorded at baseline and after 12 months. Standardized periapical radiographs were taken (at baseline and at 12 months) and the marginal bone height measured. All implants were successfully integrated. The mean IPD at 1 year post-op was 2.91 mm for the SA group and 2.69 mm for the TA group (p > .05). Similarly, the BOP at 1 year was almost identical in both groups. The mean values of bone resorption at baseline were 0.98 ± 0.37 mm and 0.69 ± 0.20 for the TA and SA groups, respectively (p > .05). Bone loss (baseline to 12 months) was significantly greater in the SA group compared with the TA group. Use of the new TA, with its significantly downsized diameter, resulted in reduced bone loss at 1 year. Further research will be required to assess the long-term effect of this abutment on peri-implant health. © 2014 Wiley Periodicals, Inc.

  14. Alternative expression of vacuolar iron transporter and ferritin genes leads to blue/purple coloration of flowers in tulip cv. 'Murasakizuisho'.

    PubMed

    Shoji, Kazuaki; Momonoi, Kazumi; Tsuji, Tosiaki

    2010-02-01

    Flowers of tulip cv. 'Murasakizuisho' have a purple perianth except for the bottom region, which is blue in color even though it has the same anthocyanin, delphinidin 3-O-rutinoside, as the entire perianth. The development of the blue coloration in the perianth bottom is due to complexation by anthocyanin, flavonol and iron (Fe), as well as a vacuolar iron transporter, TgVit1. Although transient expression of TgVit1 in the purple cells led to a color change to light blue, the coloration of the transformed cells did not coincide with the dark blue color of the cells of the perianth bottom. We thought that another factor is required for the blue coloration of the cells of perianth bottom. To examine the effect of ferritin (FER), an Fe storage protein, on blue color development, we cloned an FER gene (TgFER1) and performed expression analyses. TgFER1 transcripts were found in the cells located in the upper region of the petals along with purple color development by anthocyanin and were not found in the blue cells of the perianth bottom. This gene expression is in contrast to that of TgVit1, expressed only in the cells of the perianth bottom. Co-expression of TgVIT1 and TgFER-RNAi, constructed for suppressing endogenous TgFER1 by RNA interference (RNAi), changed the purple petal cells to a dark blue color similar to that of the natural perianth bottom. These results strongly suggest that TgVit1 expression and TgFER1 suppression are critical for the development of blue color in the perianth bottom.

  15. Information Retrieval for Ecological Syntheses

    ERIC Educational Resources Information Center

    Bayliss, Helen R.; Beyer, Fiona R.

    2015-01-01

    Research syntheses are increasingly being conducted within the fields of ecology and environmental management. Information retrieval is crucial in any synthesis in identifying data for inclusion whilst potentially reducing biases in the dataset gathered, yet the nature of ecological information provides several challenges when compared with…

  16. Photopolarimetric Retrievals of Snow Properties

    NASA Technical Reports Server (NTRS)

    Ottaviani, M.; van Diedenhoven, B.; Cairns, B.

    2015-01-01

    Polarimetric observations of snow surfaces, obtained in the 410-2264 nm range with the Research Scanning Polarimeter onboard the NASA ER-2 high-altitude aircraft, are analyzed and presented. These novel measurements are of interest to the remote sensing community because the overwhelming brightness of snow plagues aerosol and cloud retrievals based on airborne and spaceborne total reflection measurements. The spectral signatures of the polarized reflectance of snow are therefore worthwhile investigating in order to provide guidance for the adaptation of algorithms currently employed for the retrieval of aerosol properties over soil and vegetated surfaces. At the same time, the increased information content of polarimetric measurements allows for a meaningful characterization of the snow medium. In our case, the grains are modeled as hexagonal prisms of variable aspect ratios and microscale roughness, yielding retrievals of the grains' scattering asymmetry parameter, shape and size. The results agree with our previous findings based on a more limited data set, with the majority of retrievals leading to moderately rough crystals of extreme aspect ratios, for each scene corresponding to a single value of the asymmetry parameter.

  17. Neural networks for atmospheric retrievals

    NASA Technical Reports Server (NTRS)

    Motteler, Howard E.; Gualtieri, J. A.; Strow, L. Larrabee; Mcmillin, Larry

    1993-01-01

    We use neural networks to perform retrievals of temperature and water fractions from simulated clear air radiances for the Atmospheric Infrared Sounder (AIRS). Neural networks allow us to make effective use of the large AIRS channel set, and give good performance with noisy input. We retrieve surface temperature, air temperature at 64 distinct pressure levels, and water fractions at 50 distinct pressure levels. Using 728 temperature and surface sensitive channels, the RMS error for temperature retrievals with 0.2K input noise is 1.2K. Using 586 water and temperature sensitive channels, the mean error with 0.2K input noise is 16 percent. Our implementation of backpropagation training for neural networks on the 16,000-processor MasPar MP-1 runs at a rate of 90 million weight updates per second, and allows us to train large networks in a reasonable amount of time. Once trained, the network can be used to perform retrievals quickly on a workstation of moderate power.

  18. Hubble Space Telescope prescription retrieval.

    PubMed

    Redding, D; Dumont, P; Yu, J

    1993-04-01

    Prescription retrieval is a technique for directly estimating optical prescription parameters from images. We apply it to estimate the value of the Hubble Space Telescope primary mirror conic constant. Our results agree with other studies that examined primary-mirror test fixtures and results. In addition they show that small aberrations exist on the planetary-camera repeater optics.

  19. INFORMATION RETRIEVAL EXPERIMENT. FINAL REPORT.

    ERIC Educational Resources Information Center

    SELYE, HANS

    THIS REPORT IS A BRIEF REVIEW OF RESULTS OF AN EXPERIMENT TO DETERMINE THE INFORMATION RETRIEVAL EFFICIENCY OF A MANUAL SPECIALIZED INFORMATION SYSTEM BASED ON 700,000 DOCUMENTS IN THE FIELDS OF ENDOCRINOLOGY, STRESS, MAST CELLS, AND ANAPHYLACTOID REACTIONS. THE SYSTEM RECEIVES 30,000 PUBLICATIONS ANNUALLY. DETAILED INFORMATION IS REPRESENTED BY…

  20. The Intrex Retrieval System Software.

    ERIC Educational Resources Information Center

    Hurlburt, Charles E.; And Others

    The report describes the general structure of the Intrex Retrieval Systems and each of the component subroutines. The report is not an introduction to Intrex. In addition to a general description, the report covers the following topics: (1) system architecture, (2) software details, (3) command control logic, (4) list manipulation logic, (5)…

  1. Information Retrieval in the Classroom.

    ERIC Educational Resources Information Center

    Oley, Elizabeth

    1989-01-01

    Explores aspects of information retrieval skills such as end user training, indexing, controlled vocabulary systems, search protocol, boolean logic, problem analysis, and decision making. Suggests techniques for classroom instruction using simulations of online databases, CD-ROMs, and DIALOG's classroom instruction program. Describes several…

  2. Semantic Tools in Information Retrieval.

    ERIC Educational Resources Information Center

    Rubinoff, Morris; Stone, Don C.

    This report discusses the problem of the meansings of words used in information retrieval systems, and shows how semantic tools can aid in the communication which takes place between indexers and searchers via index terms. After treating the differing use of semantic tools in different types of systems, two tools (classification tables and…

  3. Information Retrieval in the Classroom.

    ERIC Educational Resources Information Center

    Oley, Elizabeth

    1989-01-01

    Explores aspects of information retrieval skills such as end user training, indexing, controlled vocabulary systems, search protocol, boolean logic, problem analysis, and decision making. Suggests techniques for classroom instruction using simulations of online databases, CD-ROMs, and DIALOG's classroom instruction program. Describes several…

  4. Information Retrieval for Ecological Syntheses

    ERIC Educational Resources Information Center

    Bayliss, Helen R.; Beyer, Fiona R.

    2015-01-01

    Research syntheses are increasingly being conducted within the fields of ecology and environmental management. Information retrieval is crucial in any synthesis in identifying data for inclusion whilst potentially reducing biases in the dataset gathered, yet the nature of ecological information provides several challenges when compared with…

  5. Information Retrieval in Virtual Universities

    ERIC Educational Resources Information Center

    Puustjärvi, Juha; Pöyry, Päivi

    2006-01-01

    Information retrieval in the context of virtual universities deals with the representation, organization, and access to learning objects. The representation and organization of learning objects should provide the learner with an easy access to the learning objects. In this article, we give an overview of the ONES system, and analyze the relevance…

  6. Relational Thesauri in Information Retrieval.

    ERIC Educational Resources Information Center

    Wang, Yih-Chen; Vandendorpe, James

    1985-01-01

    Describes design and development of a thesaurus based on lexical-semantic relations, and compares results of experiments with queries enhanced using thesauri based on several different groups of relations against performance with original queries run on IRS information retrieval system developed at Illinois Institute of Technology. Twenty-one…

  7. An Interactive Document Retrieval System.

    ERIC Educational Resources Information Center

    Carroll, D.E.; And Others

    The document retrieval system at Coordinated Science Laboratory is implemented on a Control Data 1604 computer system. Recorded information from each source article includes 1) conventional bibliographic data such as authorship, author affiliation, title, year of publication, etc., 2) detailed bibliographic data from each of the cited references,…

  8. How does antigen retrieval work?

    PubMed

    Leong, Trishe Y-M; Leong, Anthony S-Y

    2007-03-01

    The introduction of antigen retrieval has enabled immunohistology to become an integral component of morphologic diagnosis, routinely employed in cancer diagnosis, and for the identification of therapeutic and prognostic markers. The mechanism of antigen retrieval, however, remains speculative with the key to our understanding embedded in the actions of formaldehyde on proteins. One commonly held concept is that heat primarily breaks down protein cross-linkages that occur with aldehyde fixation, thus "unmasking" protein epitopes of interest. Enzymatic pretreatment is also thought to have a similar action whereas such "breakages" are the result of extremely rapid molecular movement induced by microwaves and ultrasound. The formation of rigid cagelike calcium complexes during formaldehyde fixation is another suggested mechanism of antigen masking requiring chelating agents for reversal. A more recent suggestion for the antigen retrieval phenomenon has evoked the Mannich reaction, which occurs with the cross-linking of some proteins. Such cross-linkages can be hydrolyzed by heat or alkalis so that the process of antigen retrieval may be the simple removal of such cross-linked proteins that are sterically interfering with the binding of antibodies to linear protein epitopes in the tissue section. We are clearly not yet in possession of all the answers to the problem.

  9. An Interactive Document Retrieval System.

    ERIC Educational Resources Information Center

    Carroll, D.E.; And Others

    The document retrieval system at Coordinated Science Laboratory is implemented on a Control Data 1604 computer system. Recorded information from each source article includes 1) conventional bibliographic data such as authorship, author affiliation, title, year of publication, etc., 2) detailed bibliographic data from each of the cited references,…

  10. Information retrieval for ecological syntheses.

    PubMed

    Bayliss, Helen R; Beyer, Fiona R

    2015-06-01

    Research syntheses are increasingly being conducted within the fields of ecology and environmental management. Information retrieval is crucial in any synthesis in identifying data for inclusion whilst potentially reducing biases in the dataset gathered, yet the nature of ecological information provides several challenges when compared with medicine that should be considered when planning and undertaking searches. We present ten recommendations for anyone considering undertaking information retrieval for ecological research syntheses that highlight the main differences with medicine and, if adopted, may help reduce biases in the dataset retrieved, increase search efficiency and improve reporting standards. They are as follows: (1) plan for information retrieval at an early stage, (2) identify and use sources of help, (3) clearly define the question to be addressed, (4) ensure that provisions for managing, recording and reporting the search are in place, (5) select an appropriate search type, (6) identify sources to be used, (7) identify limitations of the sources, (8) ensure that the search vocabulary is appropriate, (9) identify limits and filters that can help direct the search, and (10) test the strategy to ensure that it is realistic and manageable. These recommendations may be of value for other disciplines where search infrastructures are not yet sufficiently well developed. Copyright © 2014 John Wiley & Sons, Ltd.

  11. Information Retrieval in Virtual Universities

    ERIC Educational Resources Information Center

    Puustjärvi, Juha; Pöyry, Päivi

    2006-01-01

    Information retrieval in the context of virtual universities deals with the representation, organization, and access to learning objects. The representation and organization of learning objects should provide the learner with an easy access to the learning objects. In this article, we give an overview of the ONES system, and analyze the relevance…

  12. Stress disrupts response memory retrieval.

    PubMed

    Guenzel, Friederike M; Wolf, Oliver T; Schwabe, Lars

    2013-08-01

    Stress effects on memory are well-known. Most studies, however, focused on the impact of stress on hippocampus-dependent 'declarative' memory processes. Less is known about whether stress influences also striatum-based memory processes, such as stimulus-response (S-R) memory. First evidence from rodent experiments shows that glucocorticoid stress hormones may enhance the consolidation of S-R memories. Whether stress affects also S-R memory retrieval remains largely elusive. Therefore, we tested in the present experiment in humans the effect of stress on the retrieval of S-R memories. Healthy men and women were trained to locate three objects in an S-R version of a virtual eight-arm radial maze. One week later, participants underwent a stressor or a control condition before their memory of the S-R task was tested. Our results showed that participants (n=43) who were exposed to the stressor before retention testing made significantly more errors in this test trial, suggesting that stress impaired S-R memory retrieval. Moreover, high cortisol concentrations were associated with reduced S-R memory. These findings indicate that stress may affect memory retrieval processes in humans beyond hippocampal 'declarative' memory.

  13. Cross-Language Information Retrieval.

    ERIC Educational Resources Information Center

    Oard, Douglas W.; Diekema, Anne R.

    1998-01-01

    Reviews research and practice in cross-language information retrieval (CLIR) that seeks to support the process of finding documents written in one natural language with automated systems that can accept queries expressed in other languages. Addresses user needs, document preprocessing, query formulation, matching strategies, sources of translation…

  14. The Ecosystem of Information Retrieval

    ERIC Educational Resources Information Center

    Rodriguez-Munoz, Jose-Vicente; Martinez-Mendez, Francisco-Javier; Pastor-Sanchez, Juan-Antonio

    2012-01-01

    Introduction: This paper presents an initial proposal for a formal framework that, by studying the metric variables involved in information retrieval, can establish the sequence of events involved and how to perform it. Method: A systematic approach from the equations of Shannon and Weaver to establish the decidability of information retrieval…

  15. Phase 2, Solid waste retrieval strategy

    SciTech Connect

    Johnson, D.M.

    1994-09-29

    Solid TRU retrieval, Phase 1 is scheduled to commence operation in 1998 at 218W-4C-T01 and complete recovery of the waste containers in 2001. Phase 2 Retrieval will recover the remaining buried TRU waste to be retrieved and provide the preliminary characterization by non-destructive means to allow interim storage until processing for disposal. This document reports on researching the characterization documents to determine the types of wastes to be retrieved and where located, waste configurations, conditions, and required methods for retrieval. Also included are discussions of wastes encompassed by Phase 2 for which there are valid reasons to not retrieve.

  16. Satellite Retrieval of Aerosol Properties

    NASA Astrophysics Data System (ADS)

    de Leeuw, G.; Robles Gonzalez, C.; Kusmierczyk-Michulec, J.; Decae, R.

    SATELLITE RETRIEVAL of AEROSOL PROPERTIES G. de Leeuw, C. Robles Gonzalez, J. Kusmierczyk-Michulec and R. Decae TNO Physics and Electronics Laboratory, The Hague, The Netherlands; deleeuw@fel.tno.nl Methods to retrieve aerosol properties over land and over sea were explored. The dual view offered by the ATSR-2 aboard ERS-2 was used by Veefkind et al., 1998. The retrieved AOD (aerosol optical depth) values compare favourably with collocated sun photometer measurements, with an accuracy of 0.06 +/- 0.05 in AOD. An algorithm developed for GOME on ERS-2 takes advantage of the low surface reflection in the UV (Veefkind et al., 2000). AOD values retrieved from ATSR-2 and GOME data over western Europe are consistent. The results were used to produce a map of mean AOD values over Europe for one month (Robles-Gonzalez et al., 2000). The ATSR-2 is al- gorithm is now extended with other aerosol types with the aim to apply it over the In- dian Ocean. A new algorithm is being developed for the Ozone Monitoring Instrument (OMI) to be launched in 2003 on the NASA EOS-AURA satellite. It is expected that, based on the different scattering and absorption properties of various aerosol types, five major aerosol classes can be distinguished. The experience with the retrieval of aerosol properties by using several wavelength bands is used to develop an algorithm for Sciamachy to retrieve aerosol properties both over land and over the ocean which takes advantage of the wavelengths from the UV to the IR. The variation of the AOD with wavelength is described by the Angstrom parameter. The AOD and the Angstrom parameter together yield information on the aerosol size distribution, integrated over the column. Analysis of sunphotometer data indicates a relation between the Angstrom parameter and the mass ratio of certain aerosols (black carbon, organic carbon and sea salt) to the total particulate matter. This relation has been further explored and was applied to satellite data over land to

  17. To retrieve or not to retrieve: These are the issues

    SciTech Connect

    Hyde, R.A.; Dahlmeir, M.M.; Nickelson, D.F.; Swanson, S.P.

    1997-10-01

    There are many factors that must be evaluated when determining whether a buried mixed waste site should be retrieved and subsequently stored, treated, and/or disposed of or if some other action is more appropriate. The criteria developed for the evaluation of remedial actions at mixed waste sites under Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) regulation EPA, provide an excellent methodology for deciding upon a preferred action even if the site is not under CERCLA regulation. Each topic for evaluation in the criteria is not mutually exclusive, and many tradeoffs must be reviewed. The criteria have been broken down into a number of categories: overall protection of human health and the environment; compliance with Applicable or Relevant and Appropriate Requirements (ARARs); long-term effectiveness and permanence; reduction of toxicity, mobility, and volume; short-term effectiveness; implementability; cost; state acceptance; and community acceptance. Once the data is gathered, a Hazards Analysis must be performed to understand the risks of the site to workers, the public, and the environment. The Hazard Analysis is critical in helping personnel understand the associated issues so that an effective evaluation can take place. The intent of this paper is not to focus on a particular site, but to provide information that is useful for many problem holders to better understand the issues associated with buried mixed waste retrieval. Ultimately, these issues affect the final decision of whether or not retrieval is a feasible alternative.

  18. Image Indexing and Retrieval by Content.

    ERIC Educational Resources Information Center

    Cawkell, Tony

    2000-01-01

    Reviews content-based image retrieval and discusses the increase in large picture databases that are now available. Describes some of the proceedings from the Brighton (United Kingdom) conference, including the retrieval of video clips; discusses image indexing; and provides examples of image indexing and retrieval projects. (Author/LRW)

  19. Information Retrieval in Medicine: The SAPHIRE Experience.

    ERIC Educational Resources Information Center

    Hersh, William R.; Hickam, David

    1995-01-01

    Describes the SAPHIRE (Semantic and Probabilistic Heuristic Information Retrieval Environment) that was developed to identify optimal approaches to indexing, retrieval, and evaluation of information retrieval systems in the biomedical domain. Six evaluation studies that have been done with SAPHIRE are summarized and future challenges are…

  20. Retrieval Processes Supporting Judgments of Recency

    ERIC Educational Resources Information Center

    Grove, Kerrie L.; Wilding, Edward L.

    2009-01-01

    The circumstances under which different retrieval processes can support judgments about how long ago events occurred remain a matter of debate, as do the ways in which retrieved information can be employed in support of such judgments. In order to contribute to an understanding of the nature and number of distinct retrieval processes that support…

  1. Intelligent Information Retrieval Using Rough Set Approximations.

    ERIC Educational Resources Information Center

    Srinivasan, Padmini

    1989-01-01

    Describes rough sets theory and discusses the advantages it offers for information retrieval, including the implicit inclusion of Boolean logic, term weighting, ranked retrieval output, and relevance feedback. Rough set formalism is compared to Boolean, vector, and fuzzy models of information retrieval and a small scale evaluation of rough sets is…

  2. Validating a Geographical Image Retrieval System.

    ERIC Educational Resources Information Center

    Zhu, Bin; Chen, Hsinchun

    2000-01-01

    Summarizes a prototype geographical image retrieval system that demonstrates how to integrate image processing and information analysis techniques to support large-scale content-based image retrieval. Describes an experiment to validate the performance of this image retrieval system against that of human subjects by examining similarity analysis…

  3. Uterus retrieval in cadaver: technical aspects.

    PubMed

    Akar, M Erman; Ozkan, O; Ozekinci, M; Sindel, M; Yildirim, F; Oguz, N

    2014-01-01

    The authors describe uterus retrieval in cadavers. Uterine retrieval with its vasculature could be successfully achieved in four of the presented cases. Special attention was given to dissection of bilateral ureters and hypogastric vasculature. Uterine retrieval with its vasculature and supporting sacrouterine,vesicouterine peritoneal folds is an anatomically feasible procedure in preparation for uterus transplantation.

  4. EXPERIMENTAL RETRIEVAL SYSTEMS STUDIES, REPORT NUMBER 3.

    ERIC Educational Resources Information Center

    ANDERSON, RONALD R.; AND OTHERS

    CONTENTS--(1) AN ASSOCIATIVITY TECHNIQUE FOR AUTOMATICALLY OPTIMIZING RETRIEVAL RESULTS BY RONALD R. ANDERSON. AN ASSOCIATIVE TECHNIQUE BY WHICH IT IS POSSIBLE TO AUTOMATICALLY EXPAND AND NARROW THE NUMBER OF DOCUMENTS RETRIEVED AND TO RETRIEVE DOCUMENTS RELATED TO A REQUEST EVEN THOUGH THEY MAY NOT BE INDEXED BY THE EXACT TERMS OF THE REQUEST IS…

  5. The Networking of Interactive Bibliographic Retrieval Systems.

    ERIC Educational Resources Information Center

    Marcus, Richard S.; Reintjes, J. Francis

    Research in networking of heterogeneous interactive bibliographic retrieval systems is being conducted which centers on the concept of a virtual retrieval system. Such a virtual system would be created through a translating computer interface that would provide access to the different retrieval systems and data bases in a uniform and convenient…

  6. RETRIEVAL OF TECHNICAL DOCUMENTS. FINAL SCIENTIFIC REPORT.

    ERIC Educational Resources Information Center

    BOHNERT, LEA M.

    A RETRIEVAL MODEL WAS DEVELOPED FOR TEACHING AND RESEARCH PURPOSES ON THE BASIS OF VARIED WORK EXPERIENCE AND ANALYSIS OF TECHNICAL DOCUMENT RETRIEVAL AND LIBRARY SERVICES. THE MODEL IS BASED ON SHANNON'S COMMUNICATION MODEL BUT IDENTIFIES THE WOULD BE READER, OR DESTINATION OF RECORDED MESSAGES, AS THE ACTIVATOR OF RETRIEVAL SERVICES. TWO MAIN…

  7. EXPERIMENTAL RETRIEVAL SYSTEMS STUDIES, REPORT NUMBER 3.

    ERIC Educational Resources Information Center

    ANDERSON, RONALD R.; AND OTHERS

    CONTENTS--(1) AN ASSOCIATIVITY TECHNIQUE FOR AUTOMATICALLY OPTIMIZING RETRIEVAL RESULTS BY RONALD R. ANDERSON. AN ASSOCIATIVE TECHNIQUE BY WHICH IT IS POSSIBLE TO AUTOMATICALLY EXPAND AND NARROW THE NUMBER OF DOCUMENTS RETRIEVED AND TO RETRIEVE DOCUMENTS RELATED TO A REQUEST EVEN THOUGH THEY MAY NOT BE INDEXED BY THE EXACT TERMS OF THE REQUEST IS…

  8. Intelligent Information Retrieval Using Rough Set Approximations.

    ERIC Educational Resources Information Center

    Srinivasan, Padmini

    1989-01-01

    Describes rough sets theory and discusses the advantages it offers for information retrieval, including the implicit inclusion of Boolean logic, term weighting, ranked retrieval output, and relevance feedback. Rough set formalism is compared to Boolean, vector, and fuzzy models of information retrieval and a small scale evaluation of rough sets is…

  9. Validating a Geographical Image Retrieval System.

    ERIC Educational Resources Information Center

    Zhu, Bin; Chen, Hsinchun

    2000-01-01

    Summarizes a prototype geographical image retrieval system that demonstrates how to integrate image processing and information analysis techniques to support large-scale content-based image retrieval. Describes an experiment to validate the performance of this image retrieval system against that of human subjects by examining similarity analysis…

  10. A Logic Basis for Information Retrieval.

    ERIC Educational Resources Information Center

    Watters, C. R.; Shepherd, M. A.

    1987-01-01

    Discusses the potential of recent work in artificial intelligence, especially expert systems, for the development of more effective information retrieval systems. Highlights include the role of an expert bibliographic retrieval system and a prototype expert retrieval system, PROBIB-2, that uses MicroProlog to provide deductive reasoning…

  11. Undersampled Phase Retrieval with Outliers

    PubMed Central

    Weller, Daniel S.; Pnueli, Ayelet; Divon, Gilad; Radzyner, Ori; Eldar, Yonina C.; Fessler, Jeffrey A.

    2015-01-01

    This paper proposes a general framework for reconstructing sparse images from undersampled (squared)-magnitude data corrupted with outliers and noise. This phase retrieval method uses a layered approach, combining repeated minimization of a convex majorizer (surrogate for a nonconvex objective function), and iterative optimization of that majorizer using a preconditioned variant of the alternating direction method of multipliers (ADMM). Since phase retrieval is nonconvex, this implementation uses multiple initial majorization vectors. The introduction of a robust 1-norm data fit term that is better adapted to outliers exploits the generality of this framework. The derivation also describes a normalization scheme for the regularization parameter and a known adaptive heuristic for the ADMM penalty parameter. Both 1D Monte Carlo tests and 2D image reconstruction simulations suggest the proposed framework, with the robust data fit term, reduces the reconstruction error for data corrupted with both outliers and additive noise, relative to competing algorithms having the same total computation. PMID:26770999

  12. Phase retrieval in protein crystallography.

    PubMed

    Liu, Zhong Chuan; Xu, Rui; Dong, Yu Hui

    2012-03-01

    Solution of the phase problem is central to crystallographic structure determination. An oversampling method is proposed, based on the hybrid input-output algorithm (HIO) [Fienup (1982). Appl. Opt. 21, 2758-2769], to retrieve the phases of reflections in crystallography. This method can extend low-resolution structures to higher resolution for structure determination of proteins without additional sample preparation. The method requires an envelope of the protein which divides a unit cell into the density region where the proteins are located and the non-density region occupied by solvents. After a few hundred to a few thousand iterations, the correct phases and density maps are recovered. The method has been used successfully in several cases to retrieve the phases from the experimental X-ray diffraction data and the envelopes of proteins constructed from structure files downloaded from the Protein Data Bank. It is hoped that this method will greatly facilitate the ab initio structure determination of proteins.

  13. Automated information retrieval using CLIPS

    NASA Technical Reports Server (NTRS)

    Raines, Rodney Doyle, III; Beug, James Lewis

    1991-01-01

    Expert systems have considerable potential to assist computer users in managing the large volume of information available to them. One possible use of an expert system is to model the information retrieval interests of a human user and then make recommendations to the user as to articles of interest. At Cal Poly, a prototype expert system written in the C Language Integrated Production System (CLIPS) serves as an Automated Information Retrieval System (AIRS). AIRS monitors a user's reading preferences, develops a profile of the user, and then evaluates items returned from the information base. When prompted by the user, AIRS returns a list of items of interest to the user. In order to minimize the impact on system resources, AIRS is designed to run in the background during periods of light system use.

  14. Desert Dust Satellite Retrieval Intercomparison

    NASA Technical Reports Server (NTRS)

    Carboni, E.; Thomas, G. E.; Sayer, A. M.; Siddans, R.; Poulsen, C. A.; Grainger, R. G.; Ahn, C.; Antoine, D.; Bevan, S.; Braak, R.; Brindley, H.; DeSouza-Mchado, S.; Deuze, J. L.; Diner, D.; Ducos, F.; Grey, W.; Hsu, C.; Kalashnikova, O. V.; Kahn, R.; North, P. R. J.; Salustro, C.; Smith, A.; Tanre, D.; Torres, O.; Veihelmann, B.

    2012-01-01

    This work provides a comparison of satellite retrievals of Saharan desert dust aerosol optical depth (AOD) during a strong dust event through March 2006. In this event, a large dust plume was transported over desert, vegetated, and ocean surfaces. The aim is to identify and understand the differences between current algorithms, and hence improve future retrieval algorithms. The satellite instruments considered are AATSR, AIRS, MERIS, MISR, MODIS, OMI, POLDER, and SEVIRI. An interesting aspect is that the different algorithms make use of different instrument characteristics to obtain retrievals over bright surfaces. These include multi-angle approaches (MISR, AATSR), polarisation measurements (POLDER), single-view approaches using solar wavelengths (OMI, MODIS), and the thermal infrared spectral region (SEVIRI, AIRS). Differences between instruments, together with the comparison of different retrieval algorithms applied to measurements from the same instrument, provide a unique insight into the performance and characteristics of the various techniques employed. As well as the intercomparison between different satellite products, the AODs have also been compared to co-located AERONET data. Despite the fact that the agreement between satellite and AERONET AODs is reasonably good for all of the datasets, there are significant differences between them when compared to each other, especially over land. These differences are partially due to differences in the algorithms, such as as20 sumptions about aerosol model and surface properties. However, in this comparison of spatially and temporally averaged data, at least as significant as these differences are sampling issues related to the actual footprint of each instrument on the heterogeneous aerosol field, cloud identification and the quality control flags of each dataset.

  15. Rapidly Retargetable Interactive Translingual Retrieval

    DTIC Science & Technology

    2001-01-01

    vocabulary beyond that which was available af- ter term-by-term translation. This is analogous to the process that Singhal et al. applied to monolingual ...Language Evaluation Forum’s (CLEF) multilingual task. We used the English language forms of the queries to retrieve English, French, German, and...tracking task was multilingual , search- ing stories in both English and Mandarin Chinese, and multi-modal, involving both newswire text and broadcast

  16. Topic Models in Information Retrieval

    DTIC Science & Technology

    2007-08-01

    the combination: Hidden Markov Model. Miller et al. (1999) presented a Hidden Markov Model ( HMM ) Information Retrieval system. They take the...combination with different methods to estimate the combination weights. The parameter estimation in the HMM framework is simplified with strict...applied a Hidden Markov Model ( HMM ) framework; Zhai and Lafferty (2002) and Cao et al. (2005) used Expectation Maximization (EM) on the mixture

  17. LOCAT - A Data Retrieval Program.

    DTIC Science & Technology

    1984-12-01

    STANDARSIA1 3 -A Suznn Y4Sl ’ś’. Doc 0 006 U m Nalionai Deftense U’" Defence nationale LOCAT -A DATA RETRIEVAL PROGRAM by Suzanne Y. Slinn SA RSA T Project...2.1 DESIGN PHILOSOPHY...................2 2.2 SATELLITE AND LOCATION SOFT KEY DISPLAY .. .. ........ 3 2.3...LOCAT -Calling Sequence .. .. ...... ........ 2 FIGURE 2: SAT/LOC Soft Key Display .. .. ...... ..... 3 FIGURE 3 : Frequency Soft Key Display

  18. Ethics, genomics, and information retrieval.

    PubMed

    Goodman, K W

    1996-05-01

    The union of genomics and computational information retrieval raises a number of ethical issues, including data sharing, database accuracy, group and subgroup stigma, and privacy and confidentiality. These issues are introduced and assigned a preliminary analysis which, it is hoped, may be of use in more sustained efforts to identify issues, solutions and potential guidelines, to stimulate education, and to strike the most appropriate balance between the rights of individuals and the needs of researchers and society.

  19. Retrieval Attempts Enhance Learning, but Retrieval Success (versus Failure) Does Not Matter

    ERIC Educational Resources Information Center

    Kornell, Nate; Klein, Patricia Jacobs; Rawson, Katherine A.

    2015-01-01

    Retrieving information from memory enhances learning. We propose a 2-stage framework to explain the benefits of retrieval. Stage 1 takes place as one attempts to retrieve an answer, which activates knowledge related to the retrieval cue. Stage 2 begins when the answer becomes available, at which point appropriate connections are strengthened and…

  20. Covert Retrieval Practice Benefits Retention as Much as Overt Retrieval Practice

    ERIC Educational Resources Information Center

    Smith, Megan A.; Roediger, Henry L., III; Karpicke, Jeffrey D.

    2013-01-01

    Many experiments provide evidence that practicing retrieval benefits retention relative to conditions of no retrieval practice. Nearly all prior research has employed retrieval practice requiring overt responses, but a few experiments have shown that covert retrieval also produces retention advantages relative to control conditions. However,…

  1. Toward an Episodic Context Account of Retrieval-Based Learning: Dissociating Retrieval Practice and Elaboration

    ERIC Educational Resources Information Center

    Lehman, Melissa; Smith, Megan A.; Karpicke, Jeffrey D.

    2014-01-01

    We tested the predictions of 2 explanations for retrieval-based learning; while the elaborative retrieval hypothesis assumes that the retrieval of studied information promotes the generation of semantically related information, which aids in later retrieval (Carpenter, 2009), the episodic context account proposed by Karpicke, Lehman, and Aue (in…

  2. Toward an Episodic Context Account of Retrieval-Based Learning: Dissociating Retrieval Practice and Elaboration

    ERIC Educational Resources Information Center

    Lehman, Melissa; Smith, Megan A.; Karpicke, Jeffrey D.

    2014-01-01

    We tested the predictions of 2 explanations for retrieval-based learning; while the elaborative retrieval hypothesis assumes that the retrieval of studied information promotes the generation of semantically related information, which aids in later retrieval (Carpenter, 2009), the episodic context account proposed by Karpicke, Lehman, and Aue (in…

  3. Multispectral vegetative canopy parameter retrieval

    NASA Astrophysics Data System (ADS)

    Borel, Christoph C.; Bunker, David J.

    2011-11-01

    Precision agriculture, forestry and environmental remote sensing are applications uniquely suited to the 8 bands that DigitalGlobe's WorldView-2 provides. At the fine spatial resolution of 0.5 m (panchromatic) and 2 m (multispectral) individual trees can be readily resolved. Recent research [1] has shown that it is possible for hyper-spectral data to invert plant reflectance spectra and estimate nitrogen content, leaf water content, leaf structure, canopy leaf area index and, for sparse canopies, also soil reflectance. The retrieval is based on inverting the SAIL (Scattering by Arbitrary Inclined Leaves) vegetation radiative transfer model for the canopy structure and the reflectance model PROSPECT4/5 for the leaf reflectance. Working on the paper [1] confirmed that a limited number of adjacent bands covering just the visible and near infrared can retrieve the parameters as well, opening up the possibility that this method can be used to analyze multi-spectral WV-2 data. Thus it seems possible to create WV-2 specific inversions using 8 bands and apply them to imagery of various vegetation covered surfaces of agricultural and environmental interest. The capability of retrieving leaf water content and nitrogen content has important applications in determining the health of vegetation, e.g. plant growth status, disease mapping, quantitative drought assessment, nitrogen deficiency, plant vigor, yield, etc.

  4. Retrieval of Mir Solar Array

    NASA Technical Reports Server (NTRS)

    Rutledge, Sharon K.; deGroh, Kim K.

    1999-01-01

    A Russian solar array panel removed in November 1997 from the non-articulating photovoltaic array on the Mir core module was returned to Earth on STS-89 in January 1998. The panel had been exposed to low Earth orbit (LEO) for 10 years prior to retrieval. The retrieval provided a unique opportunity to study the effects of the LEO environment on a functional solar array. To take advantage of this opportunity, a team composed of members from RSC-Energia (Russia), the Boeing Company, and the following NASA Centers--Johnson Space Center, Kennedy Space Center, Langley Research Center, Marshall Space Flight Center, and Lewis Research Center--was put together to analyze the array. After post-retrieval inspections at the Spacehab Facility at Kennedy in Florida, the array was shipped to Lewis in Cleveland for electrical performance tests, closeup photodocumentation, and removal of selected solar cells and blanket material. With approval from RSC-Energia, five cell pairs and their accompanying blanket and mesh material, and samples of painted handrail materials were selected for removal on the basis of their ability to provide degradation information. Sites were selected that provided different sizes and shapes of micrometeoroid impacts and different levels of surface contamination. These materials were then distributed among the team for round robin testing.

  5. Initial retrieval sequence and blending strategy

    SciTech Connect

    Pemwell, D.L.; Grenard, C.E.

    1996-09-01

    This report documents the initial retrieval sequence and the methodology used to select it. Waste retrieval, storage, pretreatment and vitrification were modeled for candidate single-shell tank retrieval sequences. Performance of the sequences was measured by a set of metrics (for example,high-level waste glass volume, relative risk and schedule).Computer models were used to evaluate estimated glass volumes,process rates, retrieval dates, and blending strategy effects.The models were based on estimates of component inventories and concentrations, sludge wash factors and timing, retrieval annex limitations, etc.

  6. A Unified Mathematical Definition of Classical Information Retrieval.

    ERIC Educational Resources Information Center

    Dominich, Sandor

    2000-01-01

    Presents a unified mathematical definition for the classical models of information retrieval and identifies a mathematical structure behind relevance feedback. Highlights include vector information retrieval; probabilistic information retrieval; and similarity information retrieval. (Contains 118 references.) (Author/LRW)

  7. A Unified Mathematical Definition of Classical Information Retrieval.

    ERIC Educational Resources Information Center

    Dominich, Sandor

    2000-01-01

    Presents a unified mathematical definition for the classical models of information retrieval and identifies a mathematical structure behind relevance feedback. Highlights include vector information retrieval; probabilistic information retrieval; and similarity information retrieval. (Contains 118 references.) (Author/LRW)

  8. Using Induction to Refine Information Retrieval Strategies

    NASA Technical Reports Server (NTRS)

    Baudin, Catherine; Pell, Barney; Kedar, Smadar

    1994-01-01

    Conceptual information retrieval systems use structured document indices, domain knowledge and a set of heuristic retrieval strategies to match user queries with a set of indices describing the document's content. Such retrieval strategies increase the set of relevant documents retrieved (increase recall), but at the expense of returning additional irrelevant documents (decrease precision). Usually in conceptual information retrieval systems this tradeoff is managed by hand and with difficulty. This paper discusses ways of managing this tradeoff by the application of standard induction algorithms to refine the retrieval strategies in an engineering design domain. We gathered examples of query/retrieval pairs during the system's operation using feedback from a user on the retrieved information. We then fed these examples to the induction algorithm and generated decision trees that refine the existing set of retrieval strategies. We found that (1) induction improved the precision on a set of queries generated by another user, without a significant loss in recall, and (2) in an interactive mode, the decision trees pointed out flaws in the retrieval and indexing knowledge and suggested ways to refine the retrieval strategies.

  9. Using Induction to Refine Information Retrieval Strategies

    NASA Technical Reports Server (NTRS)

    Baudin, Catherine; Pell, Barney; Kedar, Smadar

    1994-01-01

    Conceptual information retrieval systems use structured document indices, domain knowledge and a set of heuristic retrieval strategies to match user queries with a set of indices describing the document's content. Such retrieval strategies increase the set of relevant documents retrieved (increase recall), but at the expense of returning additional irrelevant documents (decrease precision). Usually in conceptual information retrieval systems this tradeoff is managed by hand and with difficulty. This paper discusses ways of managing this tradeoff by the application of standard induction algorithms to refine the retrieval strategies in an engineering design domain. We gathered examples of query/retrieval pairs during the system's operation using feedback from a user on the retrieved information. We then fed these examples to the induction algorithm and generated decision trees that refine the existing set of retrieval strategies. We found that (1) induction improved the precision on a set of queries generated by another user, without a significant loss in recall, and (2) in an interactive mode, the decision trees pointed out flaws in the retrieval and indexing knowledge and suggested ways to refine the retrieval strategies.

  10. The D299G/T399I Toll-like receptor 4 variant associates with body and liver fat: results from the TULIP and METSIM Studies.

    PubMed

    Weyrich, Peter; Staiger, Harald; Stančáková, Alena; Machicao, Fausto; Machann, Jürgen; Schick, Fritz; Stefan, Norbert; Kuusisto, Johanna; Laakso, Markku; Schäfer, Silke; Fritsche, Andreas; Häring, Hans-Ulrich

    2010-11-15

    Toll-like-receptor 4 (TLR) is discussed to provide a molecular link between obesity, inflammation and insulin resistance. Genetic studies with replications in non-diabetic individuals in regard to their fat distribution or insulin resistance according to their carrier status of a common toll-like receptor 4 (TLR4) variant (TLR4(D299G/T399I)) are still lacking. We performed a cross-sectional analysis in individuals phenotyped for prediabetic traits as body fat composition (including magnetic resonance imaging), blood glucose levels and insulin resistance (oral glucose tolerance testing, euglycemic hyperinsulinemic clamp), according to TLR4 genotype determined by candidate SNP analyses (rs4986790). We analyzed N = 1482 non-diabetic individuals from the TÜF/TULIP cohort (South Germany, aged 39±13 y, BMI 28.5±7.9, mean±SD) and N = 5327 non-diabetic participants of the METSIM study (Finland, males aged 58±6 y, BMI 26.8±3.8) for replication purposes. German TLR4(D299G/T399I) carriers had a significantly increased body fat (XG in rs4986790: +6.98%, p = 0.03, dominant model, adjusted for age, gender) and decreased insulin sensitivity (XG: -15.3%, Matsuda model, p = 0.04; XG: -20.6%, p = 0.016, clamp; both dominant models adjusted for age, gender, body fat). In addition, both liver fat (AG: +49.7%; p = 0.002) and visceral adipose tissue (AG: +8.2%; p = 0.047, both adjusted for age, gender, body fat) were significantly increased in rs4986790 minor allele carriers, and the effect on liver fat remained significant also after additional adjustment for visceral fat (p = 0.014). The analysis in METSIM confirmed increased body fat content in association with the rare G allele in rs4986790 (AG: +1.26%, GG: +11.0%; p = 0.010, additive model, adjusted for age) and showed a non-significant trend towards decreased insulin sensitivity (AG: -0.99%, GG: -10.62%). TLR4(D299G/T399I) associates with increased total body fat, visceral fat, liver fat

  11. Striatal contributions to declarative memory retrieval

    PubMed Central

    Scimeca, Jason M.; Badre, David

    2012-01-01

    Declarative memory is known to depend on the medial temporal lobe memory system. Recently, there has been renewed focus on the relationship between the basal ganglia and declarative memory, including the involvement of striatum. However, the contribution of striatum to declarative memory retrieval remains unknown. Here, we review neuroimaging and neuropsychological evidence for the involvement of the striatum in declarative memory retrieval. From this review, we propose that, along with the prefrontal cortex (PFC), the striatum primarily supports cognitive control of memory retrieval. We conclude by proposing three hypotheses for the specific role of striatum in retrieval: (1) Striatum modulates the re-encoding of retrieved items in accord with their expected utility (adaptive encoding), (2) striatum selectively admits information into working memory that is expected to increase the likelihood of successful retrieval (adaptive gating), and (3) striatum enacts adjustments in cognitive control based on the outcome of retrieval (reinforcement learning). PMID:22884322

  12. Transuranic (TRU) Waste Phase I Retrieval Plan

    SciTech Connect

    MCDONALD, K.M.

    1999-08-27

    Phase I retrieval of post-1970 TRU wastes from burial ground 218-W-4C can be done in a safe, efficient, and cost-effective manner. Initiating TRU retrieval by retrieving uncovered drums from Trenches 1, 20, and 29, will allow retrieval to begin under the current SWBG safety authorization basis. The retrieval of buried drums from Trenches 1, 4, 20, and 29, which will require excavation, will commence once the uncovered drum are retrieved. This phased approach allows safety analysis for drum venting and drum module excavation to be completed and approved before the excavation proceeds. In addition, the lessons learned and the operational experience gained from the retrieval of uncovered drums can be applied to the more complicated retrieval of the buried drums. Precedents that have been set at SRS and LANL to perform retrieval without a trench cover, in the open air, should be followed. Open-air retrieval will result in significant cost savings over the original plans for Phase I retrieval (Project W-113). Based on LANL and SRS experience, open-air retrieval will have no adverse impacts to the environment or to the health and safety of workers or the public. Assaying the waste in the SWBG using a mobile assay system, will result in additional cost savings. It is expected that up to 50% of the suspect-TRU wastes will assay as LLW, allowing those waste to remain disposed of in the SWBG. Further processing, with its associated costs, will only occur to the portion of the waste that is verified to be TRU. Retrieval should be done, to the extent possible, under the current SWBG safety authorization basis as a normal part of SWBG operations. The use of existing personnel and existing procedures should be optimized. By working retrieval campaigns, typically during the slow months, it is easier to coordinate the availability of necessary operations personnel, and it is easier to coordinate the availability of a mobile assay vendor.

  13. Six sigma for revenue retrieval.

    PubMed

    Plonien, Cynthia

    2013-01-01

    Deficiencies in revenue retrieval due to failures in obtaining charges have contributed to a negative bottom line for numerous hospitals. Improving documentation practices through a Six Sigma process improvement initiative can minimize opportunities for errors through reviews and instill structure for compliance and consistency. Commitment to the Six Sigma principles with continuous monitoring of outcomes and constant communication of results to departments, management, and payers is a strong approach to reducing the financial impact of denials on an organization's revenues and expenses. Using Six Sigma tools can help improve the organization's financial performance not only for today, but also for health care's uncertain future.

  14. Solar Occultation Retrieval Algorithm Development

    NASA Technical Reports Server (NTRS)

    Lumpe, Jerry D.

    2004-01-01

    This effort addresses the comparison and validation of currently operational solar occultation retrieval algorithms, and the development of generalized algorithms for future application to multiple platforms. initial development of generalized forward model algorithms capable of simulating transmission data from of the POAM II/III and SAGE II/III instruments. Work in the 2" quarter will focus on: completion of forward model algorithms, including accurate spectral characteristics for all instruments, and comparison of simulated transmission data with actual level 1 instrument data for specific occultation events.

  15. Compressed sensing for phase retrieval.

    PubMed

    Newton, Marcus C

    2012-05-01

    To date there are several iterative techniques that enjoy moderate success when reconstructing phase information, where only intensity measurements are made. There remains, however, a number of cases in which conventional approaches are unsuccessful. In the last decade, the theory of compressed sensing has emerged and provides a route to solving convex optimisation problems exactly via ℓ(1)-norm minimization. Here the application of compressed sensing to phase retrieval in a nonconvex setting is reported. An algorithm is presented that applies reweighted ℓ(1)-norm minimization to yield accurate reconstruction where conventional methods fail.

  16. The validation of AIRS retrievals

    NASA Technical Reports Server (NTRS)

    Fetzer, Eric J.; Olsen, Edward T.; Chen, Luke L.; Hagan, Denise E.; Fishbein, Evan; McMillin, Larry; Zhou, Jiang; McMillan, Wallace W.

    2003-01-01

    The initial validation of Atmospheric Infrared Sounder (SIRS) experiment retrievals were completed in August 2003 as part of public release of version 3.0 data. The associated analyses are reported at http://daac.gsfc.nasa.gov/atmodyn/airs/, where data may be accessed. Here we describe some of those analyses, with an emphasis on cloud cleared radiances, atmospheric temperature profiles, sea surface temperature, total water vapor and atmospheric water vapor profiles. The results are applicable over ocean in the latitude band +/-40 degrees.

  17. Innovative grout/retrieval demonstration final report

    SciTech Connect

    Loomis, G.G.; Thompson, D.N.

    1995-01-01

    This report presents the results of an evaluation of an innovative retrieval technique for buried transuranic waste. Application of this retrieval technique was originally designed for full pit retrieval; however, it applies equally to a hot spot retrieval technology. The technique involves grouting the buried soil waste matrix with a jet grouting procedure, applying an expansive demolition grout to the matrix, and retrieving the debris. The grouted matrix provides an agglomeration of fine soil particles and contaminants resulting in an inherent contamination control during the dusty retrieval process. A full-scale field demonstration of this retrieval technique was performed on a simulated waste pit at the Idaho National Engineering Laboratory. Details are reported on all phases of this proof-of-concept demonstration including pit construction, jet grouting activities, application of the demolition grout, and actual retrieval of the grouted pit. A quantitative evaluation of aerosolized soils and rare earth tracer spread is given for all phases of the demonstration, and these results are compared to a baseline retrieval activity using conventional retrieval means. 8 refs., 47 figs., 10 tabs.

  18. The Aquarius Salinity Retrieval Algorithm

    NASA Technical Reports Server (NTRS)

    Meissner, Thomas; Wentz, Frank; Hilburn, Kyle; Lagerloef, Gary; Le Vine, David

    2012-01-01

    The first part of this presentation gives an overview over the Aquarius salinity retrieval algorithm. The instrument calibration [2] converts Aquarius radiometer counts into antenna temperatures (TA). The salinity retrieval algorithm converts those TA into brightness temperatures (TB) at a flat ocean surface. As a first step, contributions arising from the intrusion of solar, lunar and galactic radiation are subtracted. The antenna pattern correction (APC) removes the effects of cross-polarization contamination and spillover. The Aquarius radiometer measures the 3rd Stokes parameter in addition to vertical (v) and horizontal (h) polarizations, which allows for an easy removal of ionospheric Faraday rotation. The atmospheric absorption at L-band is almost entirely due to molecular oxygen, which can be calculated based on auxiliary input fields from numerical weather prediction models and then successively removed from the TB. The final step in the TA to TB conversion is the correction for the roughness of the sea surface due to wind, which is addressed in more detail in section 3. The TB of the flat ocean surface can now be matched to a salinity value using a surface emission model that is based on a model for the dielectric constant of sea water [3], [4] and an auxiliary field for the sea surface temperature. In the current processing only v-pol TB are used for this last step.

  19. Biomedical information retrieval across languages.

    PubMed

    Daumke, Philipp; Markü, Kornél; Poprat, Michael; Schulz, Stefan; Klar, Rüdiger

    2007-06-01

    This work presents a new dictionary-based approach to biomedical cross-language information retrieval (CLIR) that addresses many of the general and domain-specific challenges in current CLIR research. Our method is based on a multilingual lexicon that was generated partly manually and partly automatically, and currently covers six European languages. It contains morphologically meaningful word fragments, termed subwords. Using subwords instead of entire words significantly reduces the number of lexical entries necessary to sufficiently cover a specific language and domain. Mediation between queries and documents is based on these subwords as well as on lists of word-n-grams that are generated from large monolingual corpora and constitute possible translation units. The translations are then sent to a standard Internet search engine. This process makes our approach an effective tool for searching the biomedical content of the World Wide Web in different languages. We evaluate this approach using the OHSUMED corpus, a large medical document collection, within a cross-language retrieval setting.

  20. Endoscopic retrieval of gastric trichophytobezoar

    PubMed Central

    Zhao, Jiu-ling; Zhao, Wei-chuan; Wang, Yu-shui

    2017-01-01

    Abstract Rationale: Trichophytobezoars, which are composed of hair and plant fibers, are usually located in the stomach. They are often associated with trichophagia and trichotillomania. The most commonly reported methods of trichophytobezoar treatment are open surgery and laparoscopic retrieval; there are few reports of endoscopic removal of trichophytobezoars. Patient concerns and Diagnoses: Twelve-year-old girl presented with a 3-day history of increasing upper abdominal pain, anorexia, and postprandial emesis. She had a 3-year history of pulling out and eating her own hair. Endoscopic examination showed a large intragastric trichophytobezoar measuring 10.5 cm × 3.5 cm in size, with extension of a few hairs through the pylorus. Interventions and Outcomes: The trichophytobezoar was packed with hair fibers and contained a hard core of mixed hair and vegetable fibers. After the core was cut, the trichophytobezoar was fragmented into pieces with the alternating use of a polypectomy snare and argon plasma coagulation. A small amount of hair and nondigestible food fibers was removed with grasping forceps during the initial procedure. The remaining hairball was loosened with biopsy forceps and was injected with sodium bicarbonate solution. The trichophytobezoar was removed completely at repeat endoscopy 5 days later. After 6 months of psychological intervention, the patient had no recurrence of trichophagia or trichophytobezoar. Lessons: Endoscopy with sodium bicarbonate injection is an effective and minimally invasive method of retrieving a gastric trichophytobezoar. PMID:28099364

  1. Retrieving fear memories, as time goes by…

    PubMed Central

    Do Monte, Fabricio H.; Quirk, Gregory J.; Li, Bo; Penzo, Mario A.

    2016-01-01

    Fear conditioning researches have led to a comprehensive picture of the neuronal circuit underlying the formation of fear memories. In contrast, knowledge about the retrieval of fear memories is much more limited. This disparity may stem from the fact that fear memories are not rigid, but reorganize over time. To bring clarity and raise awareness on the time-dependent dynamics of retrieval circuits, we review current evidence on the neuronal circuitry participating in fear memory retrieval at both early and late time points after conditioning. We focus on the temporal recruitment of the paraventricular nucleus of the thalamus, and its BDNFergic efferents to the central nucleus of the amygdala, for the retrieval and maintenance of fear memories. Finally, we speculate as to why retrieval circuits change across time, and the functional benefits of recruiting structures such as the paraventricular nucleus into the retrieval circuit. PMID:27217148

  2. Retrieving fear memories, as time goes by….

    PubMed

    Do Monte, F H; Quirk, G J; Li, B; Penzo, M A

    2016-08-01

    Research in fear conditioning has provided a comprehensive picture of the neuronal circuit underlying the formation of fear memories. In contrast, our understanding of the retrieval of fear memories is much more limited. This disparity may stem from the fact that fear memories are not rigid, but reorganize over time. To bring some clarity and raise awareness about the time-dependent dynamics of retrieval circuits, we review current evidence on the neuronal circuitry participating in fear memory retrieval at both early and late time points following auditory fear conditioning. We focus on the temporal recruitment of the paraventricular nucleus of the thalamus (PVT) for the retrieval and maintenance of fear memories. Finally, we speculate as to why retrieval circuits change with time, and consider the functional strategy of recruiting structures not previously considered as part of the retrieval circuit.

  3. Scalable ranked retrieval using document images

    NASA Astrophysics Data System (ADS)

    Jain, Rajiv; Oard, Douglas W.; Doermann, David

    2013-12-01

    Despite the explosion of text on the Internet, hard copy documents that have been scanned as images still play a significant role for some tasks. The best method to perform ranked retrieval on a large corpus of document images, however, remains an open research question. The most common approach has been to perform text retrieval using terms generated by optical character recognition. This paper, by contrast, examines whether a scalable segmentation-free image retrieval algorithm, which matches sub-images containing text or graphical objects, can provide additional benefit in satisfying a user's information needs on a large, real world dataset. Results on 7 million scanned pages from the CDIP v1.0 test collection show that content based image retrieval finds a substantial number of documents that text retrieval misses, and that when used as a basis for relevance feedback can yield improvements in retrieval effectiveness.

  4. ARM Cloud Retrieval Ensemble Data Set (ACRED)

    SciTech Connect

    Zhao, C; Xie, S; Klein, SA; McCoy, R; Comstock, JM; Delanoë, J; Deng, M; Dunn, M; Hogan, RJ; Jensen, MP; Mace, GG; McFarlane, SA; O’Connor, EJ; Protat, A; Shupe, MD; Turner, D; Wang, Z

    2011-09-12

    This document describes a new Atmospheric Radiation Measurement (ARM) data set, the ARM Cloud Retrieval Ensemble Data Set (ACRED), which is created by assembling nine existing ground-based cloud retrievals of ARM measurements from different cloud retrieval algorithms. The current version of ACRED includes an hourly average of nine ground-based retrievals with vertical resolution of 45 m for 512 layers. The techniques used for the nine cloud retrievals are briefly described in this document. This document also outlines the ACRED data availability, variables, and the nine retrieval products. Technical details about the generation of ACRED, such as the methods used for time average and vertical re-grid, are also provided.

  5. PICTURES OF A SUSPECT-TRU RETRIEVAL

    SciTech Connect

    GADD, R.R.

    2007-05-24

    Retrieving ''suspect'' transuranic (TRU) waste from the Hanford Site's low-level waste burial grounds is a tall order, due to conditions that have changed as the work progresses. Project personnel developed several new methods for handling the waste that other retrieval operations may find useful. The Waste Retrieval Project is operated by Fluor Hanford, a prime contractor for the U.S. Department of Energy's Richland Operations Office since 1996.

  6. Retrieval-induced forgetting is retrieval-modality specific: Evidence from motor memory.

    PubMed

    Tempel, Tobias; Frings, Christian

    2017-05-01

    Three experiments examined the impact of matching retrieval modality at retrieval practice and at test on retrieval-induced forgetting. Participants learned sequential finger movements to be performed either with the left or with the right index finger. Subsequently, they selectively practiced half the items of one hand. A final recall test then assessed memory for all initially learned items. We contrasted different retrieval modalities. In Experiment 1, retrieval practice pertained to motor responses in one experimental condition but it pertained to visual sequence displays in another condition. The final recall test was motoric in both conditions. In Experiment 2, retrieval practice always pertained to visual sequence displays but the final recall test either pertained to motor responses or to visual sequence displays. Retrieval-induced forgetting emerged only when the modality of the final recall test matched the modality of retrieval practice. In Experiment 3, retrieval practice either involved executing motor sequences with the same finger as in the learning phase or participants had to use the opposite hand for indicating sequences. An effector change for retrieval practice eliminated retrieval-induced forgetting in a test requiring the execution of motor sequences again with the same finger as in the learning phase. We suggest that retrieval-induced forgetting occurred as a consequence of retrieval-modality-specific inhibition.

  7. Elaborative retrieval: Do semantic mediators improve memory?

    PubMed

    Lehman, Melissa; Karpicke, Jeffrey D

    2016-10-01

    The elaborative retrieval account of retrieval-based learning proposes that retrieval enhances retention because the retrieval process produces the generation of semantic mediators that link cues to target information. We tested 2 assumptions that form the basis of this account: that semantic mediators are more likely to be generated during retrieval than during restudy and that the generation of mediators facilitates later recall of targets. Although these assumptions are often discussed in the context of retrieval processes, we noted that there was little prior empirical evidence to support either assumption. We conducted a series of experiments to measure the generation of mediators during retrieval and restudy and to examine the effect of the generation of mediators on later target recall. Across 7 experiments, we found that the generation of mediators was not more likely during retrieval (and may be more likely during restudy), and that the activation of mediators was unrelated to subsequent free recall of targets and was negatively related to cued recall of targets. The results pose challenges for both assumptions of the elaborative retrieval account. (PsycINFO Database Record

  8. Wellhead bowl protector and retrieving tool

    SciTech Connect

    Young, J.A.

    1991-09-03

    This patent describes improvement in a wellhead protection system including a wear bushing and a retrieving tool. The improvement comprises a wear bushing supported within the wellhead, wherein the wear bushing includes an enlarged upper end having an external support shoulder for engagement with an internal support shoulder formed in the wellhead; wherein the wear bushing further includes an internal circumferential slot intersected by at least one vertically extending slot, the vertical slot extending from the circumferential slot to the upper end of the wear bushing; a retrieving tool having at least one outwardly biased, retractable lug member mounted thereon; and wherein the retrieving tool includes an enlarged portion adapted to be received within the enlarged upper end of the wear bushing. This patent also describes a method of retrieving a wear bushing from a wellhead comprising the steps of: lowering a retrieving tool into the wellhead for locking engagement with the wear bushing; aligning the retrieving tool with the wear bushing for automatically forcing lug members carried by the retrieving tool outwardly into locking engagement with the wear bushing; monitoring drill string weight for determining engagement of the retrieving tool with the wear bushing, wherein a substantial decrease in drill string weight is an indication that the retrieving tool is engaged with the wear bushing; and removing the wear bushing from the wellhead.

  9. Document image retrieval through word shape coding.

    PubMed

    Lu, Shijian; Li, Linlin; Tan, Chew Lim

    2008-11-01

    This paper presents a document retrieval technique that is capable of searching document images without OCR (optical character recognition). The proposed technique retrieves document images by a new word shape coding scheme, which captures the document content through annotating each word image by a word shape code. In particular, we annotate word images by using a set of topological shape features including character ascenders/descenders, character holes, and character water reservoirs. With the annotated word shape codes, document images can be retrieved by either query keywords or a query document image. Experimental results show that the proposed document image retrieval technique is fast, efficient, and tolerant to various types of document degradation.

  10. Evaluation of AERONET Aerosol Retrievals

    NASA Astrophysics Data System (ADS)

    Schuster, G. L.; Dubovik, O.; Rutledge, C. K.

    2001-12-01

    The aerosol robotic network (AERONET) program provides aerosol retrievals at ground-based sunphotometer sites throughout the world. The aerosol size distributions and refractive index retrievals at two locations have been converted to phase functions and single-scattering albedo using Mie theory. These optical properties are incorporated into a discrete-ordinates radiative transfer model and calculations are compared to independent measurements obtained at the surface. The independent measurements include principle plane radiances from sunphotometer data and narrowband irradiances from multi-filter rotating shadowband radiometer (MFRSR) and rotating shadowband spectroradiometer (RSS) data. The two locations represent radically different environments. The Atmospheric Radiation Measurement (ARM) program Central Facility (CF) represents a rural continental environment, while the CERES (Clouds and the Earth's Radiant Energy System) Ocean Validation Experiment (COVE) site represents a coastal marine environment. Both sites exhibit good agreement between the model calculations and the principle plane radiances for the year 2000 (generally better than 15 percent at optical depths greater than 0.1). A comparison with RSS measurements in July 2000 at the ARM Central Facility shows an irradiance error of 12 percent or better at tested wavelenghs longer than 500 nm. Comparisons with MFRSR data fared less well, however, indicating a discrepancy between the instruments. Inspection of 28 whole-sky imager (WSI) files coincidental with all AERONET quality-controlled retrievals during 7 days reveals that no clouds were obstructing the almucantar field of view and that indeed the whole sky was clear during this period, indicating a degree of robustness in the AERONET cloud screening. Additionally, the size distributions were evaluated at COVE with hourly-averaged wind speed and direction. Linear regression indicates that the coarse mode column-integrated surface area increases from

  11. PNRS: personalized news retrieval system

    NASA Astrophysics Data System (ADS)

    Dimitrova, Nevenka; Elenbaas, Herman; McGee, Thomas

    1999-08-01

    Personal News Retrieval System is a client-server application that delivers news segments on demand in a variety of information networks. At the server side, the news stories are segmented out from the digitized TV broadcast then classified and filtered based on consumers' preferences. At the client side, the user can access the preferred video news through the Web and watch stored video news in preferred order. Browsing preferences can be set based on anchorperson, broadcaster, category, location, top- stories and keywords. This system can be used to set up a news service run by content providers or independent media distribution companies. However, in the news era of enhanced PC/TV appliances, it is foreseeable that the whole system can run in the living room on a personal device. This paper describes the chosen server architecture, limitation of the system and solutions that can be implemented in the future.

  12. Iterative phase retrieval without support.

    PubMed

    Wu, J S; Weierstall, U; Spence, J C H; Koch, C T

    2004-12-01

    An iterative phase retrieval method for nonperiodic objects has been developed from the charge-flipping algorithm proposed in crystallography. A combination of the hybrid input-output (HIO) algorithm and the flipping algorithm has greatly improved performance. In this combined algorithm the flipping algorithm serves to find the support (object boundary) dynamically, and the HIO part improves convergence and moves the algorithm out of local minima. It starts with a single intensity measurement in the Fourier domain and does not require a priori knowledge of the support in the image domain. This method is suitable for general image recovery from oversampled diffuse elastic x-ray and electron-diffraction intensities. The relationship between this algorithm and the output-output algorithm is elucidated.

  13. Iterative phase retrieval without support

    NASA Astrophysics Data System (ADS)

    Wu, J. S.; Weierstall, U.; Spence, J. C. H.; Koch, C. T.

    2004-12-01

    An iterative phase retrieval method for nonperiodic objects has been developed from the charge-flipping algorithm proposed in crystallography. A combination of the hybrid input-output (HIO) algorithm and the flipping algorithm has greatly improved performance. In this combined algorithm the flipping algorithm serves to find the support (object boundary) dynamically, and the HIO part improves convergence and moves the algorithm out of local minima. It starts with a single intensity measurement in the Fourier domain and does not require a priori knowledge of the support in the image domain. This method is suitable for general image recovery from oversampled diffuse elastic x-ray and electron-diffraction intensities. The relationship between this algorithm and the output-output algorithm is elucidated.

  14. Optimizing CALIPSO Saharan dust retrievals

    NASA Astrophysics Data System (ADS)

    Amiridis, V.; Wandinger, U.; Marinou, E.; Giannakaki, E.; Tsekeri, A.; Basart, S.; Kazadzis, S.; Gkikas, A.; Taylor, M.; Baldasano, J.; Ansmann, A.

    2013-12-01

    We demonstrate improvements in CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations) dust extinction retrievals over northern Africa and Europe when corrections are applied regarding the Saharan dust lidar ratio assumption, the separation of the dust portion in detected dust mixtures, and the averaging scheme introduced in the Level 3 CALIPSO product. First, a universal, spatially constant lidar ratio of 58 sr instead of 40 sr is applied to individual Level 2 dust-related backscatter products. The resulting aerosol optical depths show an improvement compared with synchronous and collocated AERONET (Aerosol Robotic Network) measurements. An absolute bias of the order of -0.03 has been found, improving on the statistically significant biases of the order of -0.10 reported in the literature for the original CALIPSO product. When compared with the MODIS (Moderate-Resolution Imaging Spectroradiometer) collocated aerosol optical depth (AOD) product, the CALIPSO negative bias is even less for the lidar ratio of 58 sr. After introducing the new lidar ratio for the domain studied, we examine potential improvements to the climatological CALIPSO Level 3 extinction product: (1) by introducing a new methodology for the calculation of pure dust extinction from dust mixtures and (2) by applying an averaging scheme that includes zero extinction values for the nondust aerosol types detected. The scheme is applied at a horizontal spatial resolution of 1° × 1° for ease of comparison with the instantaneous and collocated dust extinction profiles simulated by the BSC-DREAM8b dust model. Comparisons show that the extinction profiles retrieved with the proposed methodology reproduce the well-known model biases per subregion examined. The very good agreement of the proposed CALIPSO extinction product with respect to AERONET, MODIS and the BSC-DREAM8b dust model makes this dataset an ideal candidate for the provision of an accurate and robust multiyear dust

  15. Optimizing Saharan dust CALIPSO retrievals

    NASA Astrophysics Data System (ADS)

    Amiridis, V.; Wandinger, U.; Marinou, E.; Giannakaki, E.; Tsekeri, A.; Basart, S.; Kazadzis, S.; Gkikas, A.; Taylor, M.; Baldasano, J.; Ansmann, A.

    2013-06-01

    We demonstrate improvements in CALIPSO dust extinction retrievals over North Africa and Europe when corrections are applied regarding the Saharan dust lidar ratio assumption, the separation of dust portion in detected dust mixtures, and the averaging scheme introduced in the Level 3 CALIPSO product. First, a universal, spatially constant lidar ratio of 58 sr instead of 40 sr is applied to individual Level 2 dust-related backscatter products. The resulting aerosol optical depths show an improvement compared with synchronous and co-located AERONET measurements. An absolute bias of the order of -0.03 has been found, improving on the statistically significant biases of the order of -0.10 reported in the literature for the original CALIPSO product. When compared with the MODIS co-located AOD product, the CALIPSO negative bias is even less for the lidar ratio of 58 sr. After introducing the new lidar ratio for the domain studied, we examine potential improvements to the climatological CALIPSO Level 3 extinction product: (1) by introducing a new methodology for the calculation of pure dust extinction from dust mixtures and (2) by applying an averaging scheme that includes zero extinction values for the non-dust aerosol types detected. The scheme is applied at a horizontal spatial resolution of 1° × 1° for ease of comparison with the instantaneous and co-located dust extinction profiles simulated by the BSC-DREAM8b dust model. Comparisons show that the extinction profiles retrieved with the proposed methodology reproduce the well-known model biases per sub-region examined. The very good agreement of the proposed CALIPSO extinction product with respect to AERONET, MODIS and the BSC-DREAM8b dust model, makes this dataset an ideal candidate for the provision of an accurate and robust multi-year dust climatology over North Africa and Europe.

  16. Trends in Research on Information Retrieval--The Potential for Improvements in Conventional Boolean Retrieval Systems.

    ERIC Educational Resources Information Center

    Radecki, Tadeusz

    1988-01-01

    Discusses the inability of the standard Boolean logic model of information retrieval to deal effectively with the inherent fallibility of retrieval decisions. Recent advances in information retrieval research are reviewed, and their practical potential for overcoming the deficiencies of the Boolean model is examined. (45 references) (Author/CLB)

  17. Indexing and Retrieval Performance: The Logical Evidence.

    ERIC Educational Resources Information Center

    Soergel, Dagobert

    1994-01-01

    Presents a logical analysis of the characteristics of indexing and their effects on retrieval. The foundational questions of performance evaluation and the basic quantitative performance measures for binary noninteractive retrieval systems are established. The effects of indexing devices, indexing exhaustivity, specificity, correctness, and…

  18. The Future of Indexing and Retrieval Vocabularies.

    ERIC Educational Resources Information Center

    Klingbiel, Paul H.

    The role of formal, controlled vocabularies for indexing and retrieval is contrasted with the use of natural language for these activities. The following credo is advanced for large central information processors as appropriate to the 1970's (1) Highly structured controlled vocabularies are obsolete for indexing and retrieval; (2) The natural…

  19. Enhanced Text Retrieval Using Natural Language Processing.

    ERIC Educational Resources Information Center

    Liddy, Elizabeth D.

    1998-01-01

    Defines natural language processing (NLP); describes the use of NLP in information retrieval (IR); provides seven levels of linguistic analysis: phonological, morphological, lexical, syntactic, semantic, discourse, and pragmatic. Discusses the commercial use of NLP in IR with the example of DR-LINK (Document Retrieval using LINguistic Knowledge)…

  20. Representation of Legal Knowledge for Conceptual Retrieval.

    ERIC Educational Resources Information Center

    Cross, George R.; deBessonet, Cary G.

    1985-01-01

    Describes traditional legal information retrieval systems--Juris, Lexis, Westlaw--and several new rule-based, knowledge-based, legal knowledge reasoning, and analytical legal information systems--Waterman and Peterson's Legal Decisionmaking System, Hafner's Legal Information Retrieval System, McCarty's TAXMAN, and the deBessonet representation of…

  1. Comparing Retrieval Performance in Online Data Bases.

    ERIC Educational Resources Information Center

    McCain, Katherine W.; And Others

    1987-01-01

    Assesses the impact of current coverage and indexing policies on MEDLINE's retrieval performance in the medical behavioral sciences literature by comparing retrievals in EXCERPTA MEDICA, PSYCHINFO, SCISEARCH, and SOCIAL SCISEARCH. Searches were made with descriptors, cited references, and natural language, and recall, precision, and novelty ratios…

  2. Retrieval during Learning Facilitates Subsequent Memory Encoding

    ERIC Educational Resources Information Center

    Pastotter, Bernhard; Schicker, Sabine; Niedernhuber, Julia; Bauml, Karl-Heinz T.

    2011-01-01

    In multiple-list learning, retrieval during learning has been suggested to improve recall of the single lists by enhancing list discrimination and, at test, reducing interference. Using electrophysiological, oscillatory measures of brain activity, we examined to what extent retrieval during learning facilitates list encoding. Subjects studied 5…

  3. Facilitating Internet-Scale Code Retrieval

    ERIC Educational Resources Information Center

    Bajracharya, Sushil Krishna

    2010-01-01

    Internet-Scale code retrieval deals with the representation, storage, and access of relevant source code from a large amount of source code available on the Internet. Internet-Scale code retrieval systems support common emerging practices among software developers related to finding and reusing source code. In this dissertation we focus on some…

  4. Making Space: Automated Storage and Retrieval.

    ERIC Educational Resources Information Center

    Tanis, Norman; Ventuleth, Cindy

    1987-01-01

    Describes a pilot project in automated storage and retrieval of library materials which uses miniload cranes to retrieve bins of materials, and an interface with an online catalog that patrons use to request materials. Savings in space and money and potential problems with the system are discussed. (CLB)

  5. Information Retrieval beyond the Text Document.

    ERIC Educational Resources Information Center

    Rui, Yong; Ortega, Michael; Huang, Thomas S.; Mehrotra, Sharad

    1999-01-01

    Reports some of the progress made over the years toward exploring information beyond the text domain. Describes the Multimedia Analysis and Retrieval Systems (MARS), developed to increase access to non-textual information. Addresses the following aspects of MARS: (1) visual feature extraction; (2) retrieval models; (3) query reformulation…

  6. Strategic Retrieval in a Reality Monitoring Task

    ERIC Educational Resources Information Center

    Rosburg, Timm; Mecklinger, Axel; Johansson, Mikael

    2011-01-01

    Strategic recollection refers to control processes that allow the retrieval of information that is relevant for a specific situation. These processes can be studied in memory exclusion tasks, which require the retrieval of particular kinds of episodic information. In the current study, we investigated strategic recollection in reality monitoring…

  7. Attentional Limits in Memory Retrieval--Revisited

    ERIC Educational Resources Information Center

    Green, Collin; Johnston, James C.; Ruthruff, Eric

    2011-01-01

    Carrier and Pashler (1995) concluded--based on locus-of-slack dual-task methodology--that memory retrieval was subject to a central bottleneck. However, this conclusion conflicts with evidence from other lines of research suggesting that memory retrieval proceeds autonomously, in parallel with many other mental processes. In the present…

  8. Retrieval during Learning Facilitates Subsequent Memory Encoding

    ERIC Educational Resources Information Center

    Pastotter, Bernhard; Schicker, Sabine; Niedernhuber, Julia; Bauml, Karl-Heinz T.

    2011-01-01

    In multiple-list learning, retrieval during learning has been suggested to improve recall of the single lists by enhancing list discrimination and, at test, reducing interference. Using electrophysiological, oscillatory measures of brain activity, we examined to what extent retrieval during learning facilitates list encoding. Subjects studied 5…

  9. Retrieval from Memory: Vulnerable or Inviolable?

    ERIC Educational Resources Information Center

    Jones, Dylan M.; Marsh, John E.; Hughes, Robert W.

    2012-01-01

    We show that retrieval from semantic memory is vulnerable even to the mere presence of speech. Irrelevant speech impairs semantic fluency--namely, lexical retrieval cued by a semantic category name--but only if it is meaningful (forward speech compared to reversed speech or words compared to nonwords). Moreover, speech related semantically to the…

  10. Advanced Feedback Methods in Information Retrieval.

    ERIC Educational Resources Information Center

    Salton, G.; And Others

    1985-01-01

    In this study, automatic feedback techniques are applied to Boolean query statements in online information retrieval to generate improved query statements based on information contained in previously retrieved documents. Feedback operations are carried out using conventional Boolean logic and extended logic. Experimental output is included to…

  11. Experiments in Multi-Lingual Information Retrieval.

    ERIC Educational Resources Information Center

    Salton, Gerard

    A comparison was made of the performance in an automatic information retrieval environment of user queries and document abstracts available in natural language form in both English and French. The results obtained indicate that the automatic indexing and retrieval techniques actually used appear equally effective in handling the query and document…

  12. Retrieval Testing with Hypergeometric Document Models.

    ERIC Educational Resources Information Center

    Wilbur, W. John

    1993-01-01

    Presents a method of modeling the relevance relationship in information retrieval to answer the question of the theoretical limits of certain statistical methods. Hypergeometric probability distribution is used to construct an abstract model of a database of MEDLINE records, and results of tests of vector retrieval methods are reported. (28…

  13. Exploiting Multimodal Context in Image Retrieval.

    ERIC Educational Resources Information Center

    Srihari, Rohini K.; Zhang, Zhongfei

    1999-01-01

    Finding information on the Web without encountering numerous false positives poses a challenge to multimedia information retrieval systems (MMIR). This research focuses on improving precision and recall in an MMIR system by interactively combining text processing with image processing in both the indexing and retrieval phases. A picture search…

  14. Retrieval from Memory: Vulnerable or Inviolable?

    ERIC Educational Resources Information Center

    Jones, Dylan M.; Marsh, John E.; Hughes, Robert W.

    2012-01-01

    We show that retrieval from semantic memory is vulnerable even to the mere presence of speech. Irrelevant speech impairs semantic fluency--namely, lexical retrieval cued by a semantic category name--but only if it is meaningful (forward speech compared to reversed speech or words compared to nonwords). Moreover, speech related semantically to the…

  15. Relevance and Retrieval Evaluation: Perspectives from Medicine.

    ERIC Educational Resources Information Center

    Hersh, William

    1994-01-01

    Discusses topical relevance and situational relevance, which takes into account the impact of the retrieval system on the user, in the context of medicine. Topics addressed include scientific validity; limitations of current evaluation methodology, including recall and precision; and a framework for future retrieval research based on an…

  16. Information Retrieval and the Philosophy of Language.

    ERIC Educational Resources Information Center

    Blair, David C.

    2003-01-01

    Provides an overview of some of the main ideas in the philosophy of language that have relevance to the issues of information retrieval, focusing on the description of the intellectual content. Highlights include retrieval problems; recall and precision; words and meanings; context; externalism and the philosophy of language; and scaffolding and…

  17. Enhanced Text Retrieval Using Natural Language Processing.

    ERIC Educational Resources Information Center

    Liddy, Elizabeth D.

    1998-01-01

    Defines natural language processing (NLP); describes the use of NLP in information retrieval (IR); provides seven levels of linguistic analysis: phonological, morphological, lexical, syntactic, semantic, discourse, and pragmatic. Discusses the commercial use of NLP in IR with the example of DR-LINK (Document Retrieval using LINguistic Knowledge)…

  18. Indexing and Retrieval for the Web.

    ERIC Educational Resources Information Center

    Rasmussen, Edie M.

    2003-01-01

    Explores current research on indexing and ranking as retrieval functions of search engines on the Web. Highlights include measuring search engine stability; evaluation of Web indexing and retrieval; Web crawlers; hyperlinks for indexing and ranking; ranking for metasearch; document structure; citation indexing; relevance; query evaluation;…

  19. Expert Systems and Intelligent Information Retrieval.

    ERIC Educational Resources Information Center

    Brooks, H. M.

    1987-01-01

    Explores what an intelligent information retrieval system involves and why expert system techniques might interest system designers. Expert systems research is reviewed with emphasis on components, architecture, and computer interaction, and it is concluded that information retrieval is not an ideal problem domain for expert system application at…

  20. Relevance and Retrieval Evaluation: Perspectives from Medicine.

    ERIC Educational Resources Information Center

    Hersh, William

    1994-01-01

    Discusses topical relevance and situational relevance, which takes into account the impact of the retrieval system on the user, in the context of medicine. Topics addressed include scientific validity; limitations of current evaluation methodology, including recall and precision; and a framework for future retrieval research based on an…

  1. Fuzzy Set Theoretical Approach to Document Retrieval.

    ERIC Educational Resources Information Center

    Radecki, Tadeusz

    1979-01-01

    Presents a new method of document retrieval based on the fundamental operations of fuzzy set theory. Basic notions are introduced. Then the syntax and semantics of the proposed language for document retrieval is given, and an algorithm allocating documents to particular queries is described and its properties are discussed. (Author/CWM)

  2. Facilitating Internet-Scale Code Retrieval

    ERIC Educational Resources Information Center

    Bajracharya, Sushil Krishna

    2010-01-01

    Internet-Scale code retrieval deals with the representation, storage, and access of relevant source code from a large amount of source code available on the Internet. Internet-Scale code retrieval systems support common emerging practices among software developers related to finding and reusing source code. In this dissertation we focus on some…

  3. Relation of Resemblance in Information Retrieval.

    ERIC Educational Resources Information Center

    Pietilainen, Pirkko

    1982-01-01

    Presents a method for using the amount of semantic information in search-query terms as a weighting factor in constructing a fuzzy relation of resemblance between retrieved items in information retrieval online. Two tables, two figures, and a reference list accompany the text. (Author/JL)

  4. Indexing and Retrieval for the Web.

    ERIC Educational Resources Information Center

    Rasmussen, Edie M.

    2003-01-01

    Explores current research on indexing and ranking as retrieval functions of search engines on the Web. Highlights include measuring search engine stability; evaluation of Web indexing and retrieval; Web crawlers; hyperlinks for indexing and ranking; ranking for metasearch; document structure; citation indexing; relevance; query evaluation;…

  5. Information Retrieval beyond the Text Document.

    ERIC Educational Resources Information Center

    Rui, Yong; Ortega, Michael; Huang, Thomas S.; Mehrotra, Sharad

    1999-01-01

    Reports some of the progress made over the years toward exploring information beyond the text domain. Describes the Multimedia Analysis and Retrieval Systems (MARS), developed to increase access to non-textual information. Addresses the following aspects of MARS: (1) visual feature extraction; (2) retrieval models; (3) query reformulation…

  6. Information Retrieval and the Philosophy of Language.

    ERIC Educational Resources Information Center

    Blair, David C.

    2003-01-01

    Provides an overview of some of the main ideas in the philosophy of language that have relevance to the issues of information retrieval, focusing on the description of the intellectual content. Highlights include retrieval problems; recall and precision; words and meanings; context; externalism and the philosophy of language; and scaffolding and…

  7. Memory Retrieval and Interference: Working Memory Issues

    ERIC Educational Resources Information Center

    Radvansky, Gabriel A.; Copeland, David E.

    2006-01-01

    Working memory capacity has been suggested as a factor that is involved in long-term memory retrieval, particularly when that retrieval involves a need to overcome some sort of interference (Bunting, Conway, & Heitz, 2004; Cantor & Engle, 1993). Previous work has suggested that working memory is related to the acquisition of information during…

  8. The Future of Indexing and Retrieval Vocabularies.

    ERIC Educational Resources Information Center

    Klingbiel, Paul H.

    The role of formal, controlled vocabularies for indexing and retrieval is contrasted with the use of natural language for these activities. The following credo is advanced for large central information processors as appropriate to the 1970's (1) Highly structured controlled vocabularies are obsolete for indexing and retrieval; (2) The natural…

  9. Representation of Legal Knowledge for Conceptual Retrieval.

    ERIC Educational Resources Information Center

    Cross, George R.; deBessonet, Cary G.

    1985-01-01

    Describes traditional legal information retrieval systems--Juris, Lexis, Westlaw--and several new rule-based, knowledge-based, legal knowledge reasoning, and analytical legal information systems--Waterman and Peterson's Legal Decisionmaking System, Hafner's Legal Information Retrieval System, McCarty's TAXMAN, and the deBessonet representation of…

  10. Attentional Limits in Memory Retrieval--Revisited

    ERIC Educational Resources Information Center

    Green, Collin; Johnston, James C.; Ruthruff, Eric

    2011-01-01

    Carrier and Pashler (1995) concluded--based on locus-of-slack dual-task methodology--that memory retrieval was subject to a central bottleneck. However, this conclusion conflicts with evidence from other lines of research suggesting that memory retrieval proceeds autonomously, in parallel with many other mental processes. In the present…

  11. Unsuccessful Retrieval Attempts Enhance Subsequent Learning

    ERIC Educational Resources Information Center

    Kornell, Nate; Hays, Matthew Jensen; Bjork, Robert A.

    2009-01-01

    Taking tests enhances learning. But what happens when one cannot answer a test question--does an unsuccessful retrieval attempt impede future learning or enhance it? The authors examined this question using materials that ensured that retrieval attempts would be unsuccessful. In Experiments 1 and 2, participants were asked fictional…

  12. Unsuccessful Retrieval Attempts Enhance Subsequent Learning

    ERIC Educational Resources Information Center

    Kornell, Nate; Hays, Matthew Jensen; Bjork, Robert A.

    2009-01-01

    Taking tests enhances learning. But what happens when one cannot answer a test question--does an unsuccessful retrieval attempt impede future learning or enhance it? The authors examined this question using materials that ensured that retrieval attempts would be unsuccessful. In Experiments 1 and 2, participants were asked fictional…

  13. Validation of MODIS Aerosol Retrieval Over Ocean

    NASA Technical Reports Server (NTRS)

    Remer, Lorraine A.; Tanre, Didier; Kaufman, Yoram J.; Ichoku, Charles; Mattoo, Shana; Levy, Robert; Chu, D. Allen; Holben, Brent N.; Dubovik, Oleg; Ahmad, Ziauddin; Einaudi, Franco (Technical Monitor)

    2001-01-01

    The MODerate resolution Imaging Spectroradiometer (MODIS) algorithm for determining aerosol characteristics over ocean is performing with remarkable accuracy. A two-month data set of MODIS retrievals co-located with observations from the AErosol RObotic NETwork (AERONET) ground-based sunphotometer network provides the necessary validation. Spectral radiation measured by MODIS (in the range 550 - 2100 nm) is used to retrieve the aerosol optical thickness, effective particle radius and ratio between the submicron and micron size particles. MODIS-retrieved aerosol optical thickness at 660 nm and 870 nm fall within the expected uncertainty, with the ensemble average at 660 nm differing by only 2% from the AERONET observations and having virtually no offset. MODIS retrievals of aerosol effective radius agree with AERONET retrievals to within +/- 0.10 micrometers, while MODIS-derived ratios between large and small mode aerosol show definite correlation with ratios derived from AERONET data.

  14. Compact binary hashing for music retrieval

    NASA Astrophysics Data System (ADS)

    Seo, Jin S.

    2014-03-01

    With the huge volume of music clips available for protection, browsing, and indexing, there is an increased attention to retrieve the information contents of the music archives. Music-similarity computation is an essential building block for browsing, retrieval, and indexing of digital music archives. In practice, as the number of songs available for searching and indexing is increased, so the storage cost in retrieval systems is becoming a serious problem. This paper deals with the storage problem by extending the supervector concept with the binary hashing. We utilize the similarity-preserving binary embedding in generating a hash code from the supervector of each music clip. Especially we compare the performance of the various binary hashing methods for music retrieval tasks on the widely-used genre dataset and the in-house singer dataset. Through the evaluation, we find an effective way of generating hash codes for music similarity estimation which improves the retrieval performance.

  15. GOSAT BESD XCO2 Retrieval: First Results

    NASA Astrophysics Data System (ADS)

    Heymann, Jens; Reuter, Maximilian; Hilker, Michael; Buchwitz, Michael; Schneising, Oliver; Bovensmann, Heinrich; Burrows, John P.

    2013-04-01

    Carbon dioxide (CO2) is the most important anthropogenic greenhouse gas contributing to global climate change. Column-averaged dry air mole fractions of CO2 (XCO2) as retrieved from near-surface sensitive measurements of satellite instruments such as SCIAMACHY onboard ENVISAT have the potential to provide important missing global information on the sources and sinks of CO2. This however requires to meet challenging accuracy requirements. In order to retrieve XCO2 from SCIAMACHY, the Bremen Optimal Estimation - DOAS (BESD) retrieval algorithm has been developed. After the end of the ENVISAT mission in March 2012, the only satellite instrument with high sensitivity near the surface is TANSO onboard GOSAT (launched 2009). To obtain a consistant global long-term XCO2 data set from these two instruments, a modified version of the BESD algorithm is also used for the retrieval of XCO2 from GOSAT. Here, first GOSAT BESD XCO2 retrieval results are presented.

  16. Retrieval practice protects memory against acute stress.

    PubMed

    Smith, Amy M; Floerke, Victoria A; Thomas, Ayanna K

    2016-11-25

    More than a decade of research has supported a robust consensus: Acute stress impairs memory retrieval. We aimed to determine whether a highly effective learning technique could strengthen memory against the negative effects of stress. To bolster memory, we used retrieval practice, or the act of taking practice tests. Participants first learned stimuli by either restudying or engaging in retrieval practice. Twenty-four hours later, we induced stress in half of the participants and assessed subsequent memory performance. Participants who learned by restudying demonstrated the typical stress-related memory impairment, whereas those who learned by retrieval practice were immune to the deleterious effects of stress. These results suggest that the effects of stress on memory retrieval may be contingent on the strength of the memory representations themselves. Copyright © 2016, American Association for the Advancement of Science.

  17. Retrievals of heavy ozone with MIPAS

    NASA Astrophysics Data System (ADS)

    Jonkheid, Bastiaan; Röckmann, Thomas; Glatthor, Norbert; Janssen, Christof; Stiller, Gabriele; von Clarmann, Thomas

    2016-12-01

    A method for retrieval of 18O-substituted isotopomers of O3 in the stratosphere with the Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) is presented. Using a smoothing regularisation constraint, volume mixing ratio profiles are retrieved for the main isotopologue and the symmetric and asymmetric isotopomers of singly substituted O3. For the retrieval of the heavy isotopologues, two microwindows in the MIPAS A band (685-970 cm-1) and six in the AB band (1020-1170 cm-1) are used. As the retrievals are performed as perturbations on the previously retrieved a priori profiles, the vertical resolution of the individual isotopomer profiles is very similar, which is important when calculating the ratio between two isotopomers. The performance of the method is evaluated using 1044 vertical profiles recorded with MIPAS on 1 July 2003. The mean values are separated by latitude bands, along with estimates of their uncertainties. The asymmetric isotopomer shows a mean enrichment of ˜ 8 %, with a vertical profile that increases up to 33 km and decreases at higher altitudes. This decrease with altitude is a robust result that does not depend on retrieval settings, and it has not been reported clearly in previously published datasets. The symmetric isotopomer is considerably less enriched, with mean values around 3 % and with a large spread. In individual retrievals the uncertainty of the enrichment is dominated by the measurement noise (2-4 %), which can be reduced by averaging multiple retrievals; systematic uncertainties linked to the retrieval are generally small at ˜ 0.5 %, but this is likely underestimated because the uncertainties in key spectroscopic parameters are unknown. The variabilities in the retrieval results are largest for the Southern Hemisphere.

  18. Toward an episodic context account of retrieval-based learning: dissociating retrieval practice and elaboration.

    PubMed

    Lehman, Melissa; Smith, Megan A; Karpicke, Jeffrey D

    2014-11-01

    We tested the predictions of 2 explanations for retrieval-based learning; while the elaborative retrieval hypothesis assumes that the retrieval of studied information promotes the generation of semantically related information, which aids in later retrieval (Carpenter, 2009), the episodic context account proposed by Karpicke, Lehman, and Aue (in press) assumes that retrieval alters the representation of episodic context and improves one's ability to guide memory search on future tests. Subjects studied multiple word lists and either recalled each list (retrieval practice), did a math task (control), or generated associates for each word (elaboration) after each list. After studying the last list, all subjects recalled the list and, after a 5-min delay, recalled all lists. Analyses of correct recall, intrusions, response times, and temporal clustering dissociate retrieval practice from elaboration, supporting the episodic context account. PsycINFO Database Record (c) 2014 APA, all rights reserved.

  19. Retrieval-practice task affects relationship between working memory capacity and retrieval-induced forgetting.

    PubMed

    Storm, Benjamin C; Bui, Dung C

    2016-11-01

    Retrieving a subset of items from memory can cause forgetting of other items in memory, a phenomenon referred to as retrieval-induced forgetting (RIF). Individuals who exhibit greater amounts of RIF have been shown to also exhibit superior working memory capacity (WMC) and faster stop-signal reaction times (SSRTs), results which have been interpreted as suggesting that RIF reflects an inhibitory process that is mediated by the processes of executive control. Across four experiments, we sought to further elucidate this issue by manipulating the way in which participants retrieved items during retrieval practice and examining how the resulting effects of forgetting correlated with WMC (Experiments 1-3) and SSRT (Experiment 4). Significant correlations were observed when participants retrieved items from an earlier study phase (within-list retrieval practice), but not when participants generated items from semantic memory (extra-list retrieval practice). These results provide important new insight into the role of executive-control processes in RIF.

  20. Antigen Retrieval Causes Protein Unfolding

    PubMed Central

    Fowler, Carol B.; Evers, David L.; O’Leary, Timothy J.; Mason, Jeffrey T.

    2011-01-01

    Antigen retrieval (AR), in which formalin-fixed paraffin-embedded tissue sections are briefly heated in buffers at high temperature, often greatly improves immunohistochemical staining. An important unresolved question regarding AR is how formalin treatment affects the conformation of protein epitopes and how heating unmasks these epitopes for subsequent antibody binding. The objective of the current study was to use model proteins to determine the effect of formalin treatment on protein conformation and thermal stability in relation to the mechanism of AR. Sodium dodecyl sulfate polyacrylamide gel electrophoresis was used to identify the presence of protein formaldehyde cross-links, and circular dichroism spectropolarimetry was used to determine the effect of formalin treatment and high-temperature incubation on the secondary and tertiary structure of the model proteins. Results revealed that for some proteins, formalin treatment left the native protein conformation unaltered, whereas for others, formalin denatured tertiary structure, yielding a molten globule protein. In either case, heating to temperatures used in AR methods led to irreversible protein unfolding, which supports a linear epitope model of recovered protein immunoreactivity. Consequently, the core mechanism of AR likely centers on the restoration of normal protein chemical composition coupled with improved accessibility to linear epitopes through protein unfolding. PMID:21411808

  1. Retrieved Latent Heating from TRMM

    NASA Technical Reports Server (NTRS)

    Tao, Wei-Kuo; Smith, Eric A.; Houze Jr, Robert

    2008-01-01

    The global hydrological cycle is central to the Earth's climate system, with rainfall and the physics of precipitation formation acting as the key links in the cycle. Two-thirds of global rainfall occurs in the tropics with the associated latent heating (LH) accounting for three-fourths of the total heat energy available to the Earth's atmosphere. In addition, fresh water provided by tropical rainfall and its variability exerts a large impact upon the structure and motions of the upper ocean layer. In the last decade, it has been established that standard products of LH from satellite measurements, particularly TRMM measurements, would be a valuable resource for scientific research and applications. Such products would enable new insights and investigations concerning the complexities of convection system life cycles, the diabatic heating controls and feedbacks related to meso-synoptic circulations and their forecasting, the relationship of tropical patterns of LH to the global circulation and climate, and strategies for improving cloud parameterizations in environmental prediction models. The status of retrieved TRMM LH products, TRMM LH inter-comparison and validation project, current TRMM LH applications and critic issues/action items (based on previous five TRMM LH workshops) is presented in this article.

  2. Paraparesis in a Golden Retriever.

    PubMed

    Aschenbroich, S; Woolcock, A; Rissi, D R

    2014-09-01

    A 7-year-old female spayed Golden Retriever dog presented with fever and a 10-day history of neurological signs, including ambulatory paraparesis and pelvic limb ataxia. Neurological examination initially revealed a T3-L3 myelopathy. Thoracic radiographs revealed a diffuse miliary pulmonary pattern. Endotracheal washes and fine-needle aspirates from several organs aimed at identifying a potential infectious agent or neoplastic process were all unsuccessful. Due to worsening of the clinical signs, euthanasia was elected. Necropsy findings included multifocal, pale to dark red, firm nodules infiltrating the lungs, heart, mesentery, pancreas, small intestine, brain, and spinal cord. Cytological examination of impression smears obtained from the pulmonary nodules during necropsy revealed clusters of epithelioid cells admixed with fewer spindle cells, erythrocytes, and scattered leukocytes. Clinical signs and cytological findings initially suggested the possibility of a widespread granulomatous disease or a metastatic epithelial neoplasm as possible clinical differentials in this case. The final diagnosis was based on the gross and histological findings, with confirmation following histochemistry and immunohistochemistry. © The Author(s) 2013.

  3. Data storage and retrieval system

    NASA Technical Reports Server (NTRS)

    Nakamoto, Glen

    1992-01-01

    The Data Storage and Retrieval System (DSRS) consists of off-the-shelf system components integrated as a file server supporting very large files. These files are on the order of one gigabyte of data per file, although smaller files on the order of one megabyte can be accommodated as well. For instance, one gigabyte of data occupies approximately six 9-track tape reels (recorded at 6250 bpi). Due to this large volume of media, it was desirable to 'shrink' the size of the proposed media to a single portable cassette. In addition to large size, a key requirement was that the data needs to be transferred to a (VME based) workstation at very high data rates. One gigabyte (GB) of data needed to be transferred from an archiveable media on a file server to a workstation in less than 5 minutes. Equivalent size, on-line data needed to be transferred in less than 3 minutes. These requirements imply effective transfer rates on the order of four to eight megabytes per second (4-8 MB/s). The DSRS also needed to be able to send and receive data from a variety of other sources accessible from an Ethernet local area network.

  4. Data storage and retrieval system

    NASA Technical Reports Server (NTRS)

    Nakamoto, Glen

    1991-01-01

    The Data Storage and Retrieval System (DSRS) consists of off-the-shelf system components integrated as a file server supporting very large files. These files are on the order of one gigabyte of data per file, although smaller files on the order of one megabyte can be accommodated as well. For instance, one gigabyte of data occupies approximately six 9 track tape reels (recorded at 6250 bpi). Due to this large volume of media, it was desirable to shrink the size of the proposed media to a single portable cassette. In addition to large size, a key requirement was that the data needs to be transferred to a (VME based) workstation at very high data rates. One gigabyte (GB) of data needed to be transferred from an archiveable media on a file server to a workstation in less than 5 minutes. Equivalent size, on-line data needed to be transferred in less than 3 minutes. These requirements imply effective transfer rates on the order of four to eight megabytes per second (4-8 MB/s). The DSRS also needed to be able to send and receive data from a variety of other sources accessible from an Ethernet local area network.

  5. Spaced retrieval treatment of anomia

    PubMed Central

    Fridriksson, Julius; Holland, Audrey L.; Beeson, Pélagie; Morrow, Leigh

    2006-01-01

    Background Spaced Retrieval (SR) is a treatment approach developed to facilitate recall of information by individuals with dementia. Essentially an errorless learning procedure that can be used to facilitate recall of a variety of information, SR gradually increases the interval between correct recall of target items. Aims Given the success of using SR in dementia, the purpose of this study was to explore its usefulness in improving naming by individuals with aphasia. The rate of acquisition and retention of items was compared between SR and a more traditional treatment technique—cueing hierarchy (CH). Also, each oral naming treatment was run concurrently with a single word writing treatment. Methods & Procedures Three participants who had moderate or severe naming impairments and agraphia were studied. Single-subject design was applied across oral and written naming and treated and untreated items. Outcomes & Results The results indicate that for these participants, SR resulted in improved naming of specific items. The data further suggest that SR compared favourably to CH with regard to both acquisition and retention of items. The participants also benefited nicely from the writing treatment. Conclusions These findings suggest SR may be an alternative for managing naming impairment resulting from aphasia. Furthermore, the study supports providing treatments aimed at two different modalities concurrently. PMID:16823467

  6. Multilingual retrieval of radiology images.

    PubMed

    Kahn, Charles E

    2009-01-01

    The multilingual search engine ARRS GoldMiner Global was created to facilitate broad international access to a richly indexed collection of more than 200,000 radiologic images. Images are indexed according to key-words and medical concepts that appear in the unstructured text of their English-language image captions. GoldMiner Global exploits the Unicode standard, which allows the accurate representation of characters and ideographs from virtually any language and which supports both left-to-right and right-to-left text directions. The user interface supports queries in Arabic, Chinese, French, German, Italian, Japanese, Korean, Portuguese, Russian, or Spanish. GoldMiner Global incorporates an interface to the United States National Library of Medicine that translates queries into English-language Medical Subject Headings (MeSH) terms. The translated MeSH terms are then used to search the image index and retrieve relevant images. Explanatory text, pull-down menu choices, and navigational guides are displayed in the selected language; search results are displayed in English. GoldMiner Global is freely available on the World Wide Web.

  7. Solid waste retrieval. Phase 1, Operational basis

    SciTech Connect

    Johnson, D.M.

    1994-09-30

    This Document describes the operational requirements, procedures, and options for execution of the retrieval of the waste containers placed in buried storage in Burial Ground 218W-4C, Trench 04 as TRU waste or suspect TRU waste under the activity levels defining this waste in effect at the time of placement. Trench 04 in Burial Ground 218W-4C is totally dedicated to storage of retrievable TRU waste containers or retrievable suspect TRU waste containers and has not been used for any other purpose.

  8. TDPP FOR THE RETRIEVABILITY STRATEGY REPORT

    SciTech Connect

    P.D. Gehner

    1997-01-28

    The objective of this systems study is to produce a waste removability strategy document that contains sufficient details, recommended design alternatives, and the technical rationale (a) to support Licensing in the development of the License Application Plan, and (b) to provide input in the form of design requirements, for the FY 97 Retrieval Design & Operation activity in support of viability assessment. The intent of this systems study is to support a decision on how to proceed with design with respect to retrievability, regarding the extent to which the repository/waste package designs should accommodate the retrieval option.

  9. Fuel Retrieval System Design Verification Report

    SciTech Connect

    GROTH, B.D.

    2000-04-11

    The Fuel Retrieval Subproject was established as part of the Spent Nuclear Fuel Project (SNF Project) to retrieve and repackage the SNF located in the K Basins. The Fuel Retrieval System (FRS) construction work is complete in the KW Basin, and start-up testing is underway. Design modifications and construction planning are also underway for the KE Basin. An independent review of the design verification process as applied to the K Basin projects was initiated in support of preparation for the SNF Project operational readiness review (ORR). A Design Verification Status Questionnaire, Table 1, is included which addresses Corrective Action SNF-EG-MA-EG-20000060, Item No.9 (Miller 2000).

  10. Retrieval-induced forgetting: dynamic effects between retrieval and restudy trials when practice is mixed.

    PubMed

    Dobler, Ina M; Bäuml, Karl-Heinz T

    2013-05-01

    Results from numerous previous studies suggest that when subjects study items from different categories and then repeatedly retrieve, or restudy, some of the items from some of the categories, repeated retrieval, but not repeated study, induces forgetting of related unpracticed items. We investigated in two experiments whether such effects of pure retrieval and pure study practice generalize to mixed practice-that is, when retrieval and restudy trials are randomly interleaved within a single experimental block. Experiment 1 employed cued recall; Experiment 2 employed item recognition testing. In both experiments, pure repeated retrieval, but not pure repeated study, caused forgetting of related unpracticed items, which is consistent with the prior work. In contrast, with mixed practice, both retrieval and restudy induced forgetting. Thus, whereas retrieval caused forgetting regardless of practice mode, restudy caused forgetting with mixed practice, but not with pure practice. The finding provides first evidence for dynamic effects between retrieval and restudy trials when practice is mixed. It is consistent with the view that, with mixed practice, subjects engage in more retrieval during restudy trials, so that restudy trials may trigger similar processes as retrieval trials and, thus, induce forgetting of related, not restudied, items.

  11. Accelerated Adaptive MGS Phase Retrieval

    NASA Technical Reports Server (NTRS)

    Lam, Raymond K.; Ohara, Catherine M.; Green, Joseph J.; Bikkannavar, Siddarayappa A.; Basinger, Scott A.; Redding, David C.; Shi, Fang

    2011-01-01

    The Modified Gerchberg-Saxton (MGS) algorithm is an image-based wavefront-sensing method that can turn any science instrument focal plane into a wavefront sensor. MGS characterizes optical systems by estimating the wavefront errors in the exit pupil using only intensity images of a star or other point source of light. This innovative implementation of MGS significantly accelerates the MGS phase retrieval algorithm by using stream-processing hardware on conventional graphics cards. Stream processing is a relatively new, yet powerful, paradigm to allow parallel processing of certain applications that apply single instructions to multiple data (SIMD). These stream processors are designed specifically to support large-scale parallel computing on a single graphics chip. Computationally intensive algorithms, such as the Fast Fourier Transform (FFT), are particularly well suited for this computing environment. This high-speed version of MGS exploits commercially available hardware to accomplish the same objective in a fraction of the original time. The exploit involves performing matrix calculations in nVidia graphic cards. The graphical processor unit (GPU) is hardware that is specialized for computationally intensive, highly parallel computation. From the software perspective, a parallel programming model is used, called CUDA, to transparently scale multicore parallelism in hardware. This technology gives computationally intensive applications access to the processing power of the nVidia GPUs through a C/C++ programming interface. The AAMGS (Accelerated Adaptive MGS) software takes advantage of these advanced technologies, to accelerate the optical phase error characterization. With a single PC that contains four nVidia GTX-280 graphic cards, the new implementation can process four images simultaneously to produce a JWST (James Webb Space Telescope) wavefront measurement 60 times faster than the previous code.

  12. Information retrieval from black holes

    NASA Astrophysics Data System (ADS)

    Lochan, Kinjalk; Chakraborty, Sumanta; Padmanabhan, T.

    2016-08-01

    It is generally believed that, when matter collapses to form a black hole, the complete information about the initial state of the matter cannot be retrieved by future asymptotic observers, through local measurements. This is contrary to the expectation from a unitary evolution in quantum theory and leads to (a version of) the black hole information paradox. Classically, nothing else, apart from mass, charge, and angular momentum is expected to be revealed to such asymptotic observers after the formation of a black hole. Semiclassically, black holes evaporate after their formation through the Hawking radiation. The dominant part of the radiation is expected to be thermal and hence one cannot know anything about the initial data from the resultant radiation. However, there can be sources of distortions which make the radiation nonthermal. Although the distortions are not strong enough to make the evolution unitary, these distortions carry some part of information regarding the in-state. In this work, we show how one can decipher the information about the in-state of the field from these distortions. We show that the distortions of a particular kind—which we call nonvacuum distortions—can be used to fully reconstruct the initial data. The asymptotic observer can do this operationally by measuring certain well-defined observables of the quantum field at late times. We demonstrate that a general class of in-states encode all their information content in the correlation of late time out-going modes. Further, using a 1 +1 dimensional dilatonic black hole model to accommodate backreaction self-consistently, we show that observers can also infer and track the information content about the initial data, during the course of evaporation, unambiguously. Implications of such information extraction are discussed.

  13. Information retrieval using a "digital book shelf".

    PubMed Central

    Frisse, M. E.; Cousins, S. B.; Hassan, S. W.

    1991-01-01

    WALT (Washington University's Approach to Lots of Text), is a prototype interface designed to support information retrieval research. The WALT interface serves as a "front end" to a wide array of retrieval engines including those based on Boolean retrieval, latent semantic indexing, term frequency--inverse document frequency, and Bayesian inference techniques. The WALT interface is composed of seven distinct components: a document examination component known as the Document Browsing Area; four navigation components called the Book Shelf, the Book Spine, the Table of Contents, and the Path Clipboard; a term-based information retrieval component called Control Panel; and a relevance feedback component known as the Reader Feedback Panel. WALT's most unique feature may be it's use of "book shelf" and "book spine" metaphors both to facilitate navigation and to provide a histogram-based display showing documents deemed appropriate for answering user queries. PMID:1807717

  14. Environmental impacts of proposed Monitored Retrievable Storage

    SciTech Connect

    Scharber, Wayne K.; Macintire, H. A.; Davis, Paul E.; Cothron, Terry K.; Stephens, Barry K.; Travis, Norman; Walter, George; Mobley, Mike

    1985-12-17

    This report describes environmental impacts from a proposed monitored retrievable storage facility for spent fuels to be located in Tennessee. Areas investigated include: water supply, ground water, air quality, solid waste management, and health hazards. (CBS)

  15. Computerized Information Storage and Retrieval Systems.

    ERIC Educational Resources Information Center

    Azubuike, Abraham A.; Umoh, Jackson S.

    1988-01-01

    Describes the concept of maximum indexing, a system aimed at achieving maximum recall and maximum precision in computerized information retrieval. The indexing strategies used to achieve maximum indexing and the problems that arise are discussed. (9 references) (CLB)

  16. The Indexing and Retrieval of Digital Items.

    ERIC Educational Resources Information Center

    Beaney, Sandie; Carpenter, Leona

    1996-01-01

    Discusses cataloging and indexing for the retrieval of digital items as part of the British Library's Initiatives for Access program. Highlights include standards, digital catalogs, Novel access software that includes fuzzy matching, software choice and development, and future possibilities. (LRW)

  17. The JPL Library Information Retrieval System

    ERIC Educational Resources Information Center

    Walsh, Josephine

    1975-01-01

    The development, capabilities, and products of the computer-based retrieval system of the Jet Propulsion Laboratory Library are described. The system handles books and documents, produces a book catalog, and provides a machine search capability. (Author)

  18. Content-Based Medical Image Retrieval

    NASA Astrophysics Data System (ADS)

    Müller, Henning; Deserno, Thomas M.

    This chapter details the necessity for alternative access concepts to the currently mainly text-based methods in medical information retrieval. This need is partly due to the large amount of visual data produced, the increasing variety of medical imaging data and changing user patterns. The stored visual data contain large amounts of unused information that, if well exploited, can help diagnosis, teaching and research. The chapter briefly reviews the history of image retrieval and its general methods before technologies that have been developed in the medical domain are focussed. We also discuss evaluation of medical content-based image retrieval (CBIR) systems and conclude with pointing out their strengths, gaps, and further developments. As examples, the MedGIFT project and the Image Retrieval in Medical Applications (IRMA) framework are presented.

  19. On Relative Indexing in Fuzzy Retrieval Systems.

    ERIC Educational Resources Information Center

    Rousseau, Ronald

    1985-01-01

    Presents a modification function for weights of descriptors for documents in fuzzy retrieval systems which includes some desirable properties that are lacking in the model proposed by Choros and Danilowicz in their study on relative indexing. (MBR)

  20. Improving case retrieval by remembering questions

    SciTech Connect

    Alterman, R.; Griffin, D.

    1996-12-31

    This paper discusses techniques that improve the performance of a case retrieval system, after it is deployed, as a result of the continued usage of the system, by remembering previous episodes of question answering. The user generates a request for information and the system responds with the retrieval of relevant case(s). A history of such transactional behavior over a given set of data is maintained by the system and used as a foundation for adapting its future retrieval behavior. With each transaction, the system acquires information about the usage of the system that is subsequently used to adjust the behavior of the system. This notion of a case retrieval system draws on a distinction between the system in isolation and the system as it is used for a particular set of cases. It also draws on distinctions between the designed system, the deployed system, and the system that emerges as it is used.

  1. Idiopathic Horner's syndrome in the golden retriever.

    PubMed

    Boydell, P

    1995-09-01

    A prospective study was made of cases of idiopathic Horner's syndrome in dogs referred to the author. Over a six-year period the condition was recorded in 62 golden retrievers. Examination suggested that the lesions affected the preganglionic neuron.

  2. Information content of ozone retrieval algorithms

    NASA Technical Reports Server (NTRS)

    Rodgers, C.; Bhartia, P. K.; Chu, W. P.; Curran, R.; Deluisi, J.; Gille, J. C.; Hudson, R.; Mateer, C.; Rusch, D.; Thomas, R. J.

    1989-01-01

    The algorithms are characterized that were used for production processing by the major suppliers of ozone data to show quantitatively: how the retrieved profile is related to the actual profile (This characterizes the altitude range and vertical resolution of the data); the nature of systematic errors in the retrieved profiles, including their vertical structure and relation to uncertain instrumental parameters; how trends in the real ozone are reflected in trends in the retrieved ozone profile; and how trends in other quantities (both instrumental and atmospheric) might appear as trends in the ozone profile. No serious deficiencies were found in the algorithms used in generating the major available ozone data sets. As the measurements are all indirect in someway, and the retrieved profiles have different characteristics, data from different instruments are not directly comparable.

  3. Simplified Approach Charts Improve Data Retrieval Performance

    PubMed Central

    Stewart, Michael; Laraway, Sean; Jordan, Kevin; Feary, Michael S.

    2016-01-01

    The effectiveness of different instrument approach charts to deliver minimum visibility and altitude information during airport equipment outages was investigated. Eighteen pilots flew simulated instrument approaches in three conditions: (a) normal operations using a standard approach chart (standard-normal), (b) equipment outage conditions using a standard approach chart (standard-outage), and (c) equipment outage conditions using a prototype decluttered approach chart (prototype-outage). Errors and retrieval times in identifying minimum altitudes and visibilities were measured. The standard-outage condition produced significantly more errors and longer retrieval times versus the standard-normal condition. The prototype-outage condition had significantly fewer errors and shorter retrieval times than did the standard-outage condition. The prototype-outage condition produced significantly fewer errors but similar retrieval times when compared with the standard-normal condition. Thus, changing the presentation of minima may reduce risk and increase safety in instrument approaches, specifically with airport equipment outages. PMID:28491009

  4. Multi-Spectral Cloud Property Retrieval

    NASA Technical Reports Server (NTRS)

    Carlson, Barbara E.; Lynch, R

    1999-01-01

    Despite numerous studies to retrieve cloud properties using infrared measurements the information content of the data has not yet been fully exploited. In an effort to more fully utilize the information content of infrared measurements, we have developed a multi-spectral technique for retrieving effective cloud particle size, optical depth and effective cloud temperature. While applicable to all cloud types, we begin by validating our retrieval technique through analysis of MS spectral radiances obtained during the SUCCESS field campaign over the ARM SGP CART facility, and compare our retrieval product with lidar and MODIS Airborne Simulator (MAS) measurement results. The technique is then applied to the Nimbus-4 MS infrared spectral measurements to obtain global cloud information.

  5. Generalized tetanus in a Labrador retriever

    PubMed Central

    Sprott, Kerri-Rae

    2008-01-01

    A 10-week-old, intact female, Labrador retriever was presented for progressive extensor rigidity, facial swelling, and difficulty in walking. Generalized tetanus was diagnosed and treated successfully. PMID:19252716

  6. Technical requirements specification for tank waste retrieval

    SciTech Connect

    Lamberd, D.L.

    1996-09-26

    This document provides the technical requirements specification for the retrieval of waste from the underground storage tanks at the Hanford Site. All activities covered by this scope are conducted in support of the Tank Waste Remediation System (TWRS) mission.

  7. Retrieval of ash properties from IASI measurements

    NASA Astrophysics Data System (ADS)

    Ventress, Lucy J.; McGarragh, Gregory; Carboni, Elisa; Smith, Andrew J.; Grainger, Roy G.

    2016-11-01

    A new optimal estimation algorithm for the retrieval of volcanic ash properties has been developed for use with the Infrared Atmospheric Sounding Interferometer (IASI). The retrieval method uses the wave number range 680-1200 cm-1, which contains window channels, the CO2 ν2 band (used for the height retrieval), and the O3 ν3 band.Assuming a single infinitely (geometrically) thin ash plume and combining this with the output from the radiative transfer model RTTOV, the retrieval algorithm produces the most probable values for the ash optical depth (AOD), particle effective radius, plume top height, and effective radiating temperature. A comprehensive uncertainty budget is obtained for each pixel. Improvements to the algorithm through the use of different measurement error covariance matrices are explored, comparing the results from a sensitivity study of the retrieval process using covariance matrices trained on either clear-sky or cloudy scenes. The result showed that, due to the smaller variance contained within it, the clear-sky covariance matrix is preferable. However, if the retrieval fails to pass the quality control tests, the cloudy covariance matrix is implemented.The retrieval algorithm is applied to scenes from the Eyjafjallajökull eruption in 2010, and the retrieved parameters are compared to ancillary data sources. The ash optical depth gives a root mean square error (RMSE) difference of 0.46 when compared to retrievals from the MODerate-resolution Imaging Spectroradiometer (MODIS) instrument for all pixels and an improved RMSE of 0.2 for low optical depths (AOD < 0.1). Measurements from the Facility for Airborne Atmospheric Measurements (FAAM) and Deutsches Zentrum für Luft- und Raumfahrt e.V. (DLR) flight campaigns are used to verify the retrieved particle effective radius, with the retrieved distribution of sizes for the scene showing excellent consistency. Further, the plume top altitudes are compared to derived cloud-top altitudes from the Cloud

  8. The present status and problems in document retrieval system : document input type retrieval system

    NASA Astrophysics Data System (ADS)

    Inagaki, Hirohito

    The office-automation (OA) made many changes. Many documents were begun to maintained in an electronic filing system. Therefore, it is needed to establish efficient document retrieval system to extract useful information. Current document retrieval systems are using simple word-matching, syntactic-matching, semantic-matching to obtain high retrieval efficiency. On the other hand, the document retrieval systems using special hardware devices, such as ISSP, were developed for aiming high speed retrieval. Since these systems can accept a single sentence or keywords as input, it is difficult to explain searcher's request. We demonstrated document input type retrieval system, which can directly accept document as an input, and can search similar documents from document data-base.

  9. RETRIEVAL & TREATMENT OF HANFORD TANK WASTE

    SciTech Connect

    EACKER, J.A.; SPEARS, J.A.; STURGES, M.H.; MAUSS, B.M.

    2006-01-20

    The Hanford Tank Farms contain 53 million gal of radioactive waste accumulated during over 50 years of operations. The waste is stored in 177 single-shell and double-shell tanks in the Hanford 200 Areas. The single-shell tanks were put into operation from the early 1940s through the 1960s with wastes received from several generations of processing facilities for the recovery of plutonium and uranium, and from laboratories and other ancillary facilities. The overall hanford Tank Farm system represents one of the largest nuclear legacies in the world driving towards completion of retrieval and treatment in 2028 and the associated closure activity completion by 2035. Remote operations, significant radiation/contamination levels, limited access, and old facilities are just some of the challenges faced by retrieval and treatment systems. These systems also need to be able to successfully remove 99% or more of the waste, and support waste treatment, and tank closure. The Tank Farm retrieval program has ramped up dramatically in the past three years with design, fabrication, installation, testing, and operations ongoing on over 20 of the 149 single-shell tanks. A variety of technologies are currently being pursued to retrieve different waste types, applications, and to help establish a baseline for recovery/operational efficiencies. The paper/presentation describes the current status of retrieval system design, fabrication, installation, testing, readiness, and operations, including: (1) Saltcake removal progress in Tanks S-102, S-109, and S-112 using saltcake dissolution, modified sluicing, and high pressure water lancing techniques; (2) Sludge vacuum retrieval experience from Tanks C-201, C-202, C-203, and C-204; (3) Modified sluicing experience in Tank C-103; (4) Progress on design and installation of the mobile retrieval system for sludge in potentially leaking single-shell tanks, particularly Tank C-101; and (5) Ongoing installation of various systems in the next

  10. Symposium on Human-Computer Information Retrieval.

    PubMed

    Tunkelang, Daniel; Capra, Robert; Golovchinsky, Gene; Kules, Bill; Smith, Catherine; White, Ryen

    2013-03-01

    Human-computer information retrieval (HCIR) is the study of information retrieval techniques that integrate human intelligence and algorithmic search to help people explore, understand, and use information. Since 2007, we have held an annual gathering of researchers and practitioners to advance the state of the art in this field. This meeting report summarizes the history of the HCIR symposium and emphasizes its relevance to the data science community.

  11. Retrieval techniques: LVLH and inertially stabilized payloads

    NASA Technical Reports Server (NTRS)

    Yglesias, J. A.

    1980-01-01

    Procedures and techniques are discussed for retrieving payloads that are inertially or local vertical/local horizontal (LVLH) stabilized. Selection of the retrieval profile to be used depends on several factors: (1) control authority of the payload, (2) payload sensitivity to primary reaction control system (PRCS) plumes, (3) whether the payload is inertially or LVLH stabilized, (4) location of the grapple fixture, and (5) orbiter propellant consumption. The general retrieval profiles recommended are a V-bar approach for payloads that are LVLH or gravity-gradient stabilized, and the V-bar approach with one or two phase flyaround for inertially stabilized payloads. Once the general type of profile has been selected, the detailed retrieval profile and timeline should consider the various guidelines, groundrules, and constraints associated with a particular payload or flight. Reaction control system (RCS) propellant requirements for the recommended profiles range from 200 to 1500 pounds, depending on such factors as braking techniques, flyaround maneuvers (if necessary), and stationkeeping operations. The time required to perform a retrieval (starting from 1000 feet) varies from 20 to 130 minutes, depending on the complexity of the profile. The goals of this project are to develop a profile which ensures mission success; to make the retrieval profiles simple; and to keep the pilot workload to a minimum by making use of the automatic features of the orbiter flight software whenever possible.

  12. Operant conditioning of autobiographical memory retrieval.

    PubMed

    Debeer, Elise; Raes, Filip; Williams, J Mark G; Craeynest, Miet; Hermans, Dirk

    2014-01-01

    Functional avoidance is considered as one of the key mechanisms underlying overgeneral autobiographical memory (OGM). According to this view OGM is regarded as a learned cognitive avoidance strategy, based on principles of operant conditioning; i.e., individuals learn to avoid the emotionally painful consequences associated with the retrieval of specific negative memories. The aim of the present study was to test one of the basic assumptions of the functional avoidance account, namely that autobiographical memory retrieval can be brought under operant control. Here 41 students were instructed to retrieve personal memories in response to 60 emotional cue words. Depending on the condition, they were punished with an aversive sound for the retrieval of specific or nonspecific memories in an operant conditioning procedure. Analyzes showed that the course of memory specificity significantly differed between conditions. After the procedure participants punished for nonspecific memories retrieved significantly more specific memories compared to participants punished for specific memories. However, whereas memory specificity significantly increased in participants punished for specific memories, it did not significantly decrease in participants punished for nonspecific memories. Thus, while our findings indicate that autobiographical memory retrieval can be brought under operant control, they do not support a functional avoidance view on OGM.

  13. Personalized image retrieval with user's preference model

    NASA Astrophysics Data System (ADS)

    Kim, Yong-Hwan; Lee, K. E.; Choi, K. S.; Yoo, Ji-Beom; Rhee, Phill-Kyu; Park, Youngchoon

    1998-10-01

    Recently, available information resources in the form of various media have been increased with rapid speed. Many retrieval systems for multimedia information resources have been developed only focused on their efficiency and performance. Therefore, they cannot deal with user's preferences and interests well. In this paper, we present the framework design of a personalized image retrieval system (PIRS) which can reflect user's preferences and interests incrementally. The prototype of PIRS consists of two major parts: user's preference model (UPM) and retrieval module (RM). The UPM plays a role of refining user's query to meet with user's needs. The RM retrieves the proper images for refined query by computing the similarities between each image and refined query, and the retrieved images are ordered by these similarities. In this paper, we mainly discuss about UPM. The incremental machine learning technologies have been employed to provide the user adaptable and intelligent capability to the system. The UPM is implemented by decision tree based on incremental tree induction, and adaptive resonance theory network. User's feedbacks are returned to the UPM, and they modify internal structure of the UPM. User's iterative retrieval activities with PIRS cause the UPM to be revised for user's preferences and interests. Therefore, the PIRS can be adapted to user's preferences and interests. We have achieved encouraging results through experiments.

  14. Dynamic Neural Networks Supporting Memory Retrieval

    PubMed Central

    St. Jacques, Peggy L.; Kragel, Philip A.; Rubin, David C.

    2011-01-01

    How do separate neural networks interact to support complex cognitive processes such as remembrance of the personal past? Autobiographical memory (AM) retrieval recruits a consistent pattern of activation that potentially comprises multiple neural networks. However, it is unclear how such large-scale neural networks interact and are modulated by properties of the memory retrieval process. In the present functional MRI (fMRI) study, we combined independent component analysis (ICA) and dynamic causal modeling (DCM) to understand the neural networks supporting AM retrieval. ICA revealed four task-related components consistent with the previous literature: 1) Medial Prefrontal Cortex (PFC) Network, associated with self-referential processes, 2) Medial Temporal Lobe (MTL) Network, associated with memory, 3) Frontoparietal Network, associated with strategic search, and 4) Cingulooperculum Network, associated with goal maintenance. DCM analysis revealed that the medial PFC network drove activation within the system, consistent with the importance of this network to AM retrieval. Additionally, memory accessibility and recollection uniquely altered connectivity between these neural networks. Recollection modulated the influence of the medial PFC on the MTL network during elaboration, suggesting that greater connectivity among subsystems of the default network supports greater re-experience. In contrast, memory accessibility modulated the influence of frontoparietal and MTL networks on the medial PFC network, suggesting that ease of retrieval involves greater fluency among the multiple networks contributing to AM. These results show the integration between neural networks supporting AM retrieval and the modulation of network connectivity by behavior. PMID:21550407

  15. Retrieval-induced forgetting and mental imagery.

    PubMed

    Saunders, Jo; Fernandes, Marcelle; Kosnes, Liv

    2009-09-01

    In the present article, we present four experiments in which we examined whether mental imagery can initiate retrieval-induced forgetting. Participants were presented with word pairs (Experiments 1, 2, and 3) or narratives (Experiment 4) and then engaged in selective mental imagery about half of the details from half of the categories. The results indicated that mental imagery can produce the same pattern of impairment as retrieval practice (Experiment 1) and postevent questioning (Experiment 4). Additionally, mental imagery-invoked, retrieval-induced forgetting was found for category cued recall (Experiments 1, 3, and 4) and cued recall (Experiment 2); it was found to dissipate across a 24-h delay, but only when there was no pre-delay test (Experiment 3). Such retrieval-induced forgetting was also found for imagining from the first-person and third-person perspectives (Experiment 4). From these findings, we suggest that the underlying retrieval processes behind mental imagery can initiate retrieval-induced forgetting. The findings are discussed in terms of inhibitory processes.

  16. Post-retrieval extinction attenuates cocaine memories.

    PubMed

    Sartor, Gregory C; Aston-Jones, Gary

    2014-04-01

    Recent studies have shown that post-retrieval extinction training attenuates fear and reward-related memories in both humans and rodents. This noninvasive, behavioral approach has the potential to be used in clinical settings to treat maladaptive memories that underlie several psychiatric disorders, including drug addiction. However, few studies to date have used a post-retrieval extinction approach to attenuate addiction-related memories. In the current study, we attempted to disrupt cocaine-related memories by using the post-retrieval extinction paradigm in male Sprague Dawley rats. Results revealed that starting extinction training 1 h after cocaine contextual memory was retrieved significantly attenuated cocaine-primed reinstatement of conditioned place preference (CPP) and relapse of cocaine CPP (drug-free and cocaine-primed) following 30 days of abstinence. However, animals that did not retrieve the contextual cocaine memory before extinction training, or animals that began extinction training 24 h after retrieval (outside of the reconsolidation window), demonstrated normal cocaine CPP. Conversely, animals that received additional CPP conditioning, rather than extinction training, 1 h after reactivation of cocaine memory showed enhanced cocaine CPP compared with animals that did not reactivate the cocaine memory before conditioning. These results reveal that a behavioral manipulation that takes advantage of reconsolidation and extinction of drug memories may be useful in decreasing preference for, and abuse of, cocaine.

  17. Exploiting salient semantic analysis for information retrieval

    NASA Astrophysics Data System (ADS)

    Luo, Jing; Meng, Bo; Quan, Changqin; Tu, Xinhui

    2016-11-01

    Recently, many Wikipedia-based methods have been proposed to improve the performance of different natural language processing (NLP) tasks, such as semantic relatedness computation, text classification and information retrieval. Among these methods, salient semantic analysis (SSA) has been proven to be an effective way to generate conceptual representation for words or documents. However, its feasibility and effectiveness in information retrieval is mostly unknown. In this paper, we study how to efficiently use SSA to improve the information retrieval performance, and propose a SSA-based retrieval method under the language model framework. First, SSA model is adopted to build conceptual representations for documents and queries. Then, these conceptual representations and the bag-of-words (BOW) representations can be used in combination to estimate the language models of queries and documents. The proposed method is evaluated on several standard text retrieval conference (TREC) collections. Experiment results on standard TREC collections show the proposed models consistently outperform the existing Wikipedia-based retrieval methods.

  18. Neural systems behind word and concept retrieval.

    PubMed

    Damasio, H; Tranel, D; Grabowski, T; Adolphs, R; Damasio, A

    2004-01-01

    Using both the lesion method and functional imaging (positron emission tomography) in large cohorts of subjects investigated with the same experimental tasks, we tested the following hypotheses: (A) that the retrieval of words which denote concrete entities belonging to distinct conceptual categories depends upon partially segregated regions in higher-order cortices of the left temporal lobe; and (B) that the retrieval of conceptual knowledge pertaining to the same concrete entities also depends on partially segregated regions; however, those regions will be different from those postulated in hypothesis A, and located predominantly in the right hemisphere (the second hypothesis tested only with the lesion method). The analyses provide support for hypothesis A in that several regions outside the classical Broca and Wernicke language areas are involved in name retrieval of concrete entities, and that there is a partial segregation in the temporal lobe with respect to the conceptual category to which the entities belong, and partial support for hypothesis B in that retrieval of conceptual knowledge is partially segregated from name retrieval in the lesion study. Those regions identified here are seen as parts of flexible, multi-component systems serving concept and word retrieval for concrete entities belonging to different conceptual categories. By comparing different approaches the article also addresses a number of method issues that have surfaced in recent studies in this field.

  19. Easily retrievable objects among the NEO population

    NASA Astrophysics Data System (ADS)

    García Yárnoz, D.; Sanchez, J. P.; McInnes, C. R.

    2013-08-01

    Asteroids and comets are of strategic importance for science in an effort to understand the formation, evolution and composition of the Solar System. Near-Earth Objects (NEOs) are of particular interest because of their accessibility from Earth, but also because of their speculated wealth of material resources. The exploitation of these resources has long been discussed as a means to lower the cost of future space endeavours. In this paper, we consider the currently known NEO population and define a family of so-called Easily Retrievable Objects (EROs), objects that can be transported from accessible heliocentric orbits into the Earth's neighbourhood at affordable costs. The asteroid retrieval transfers are sought from the continuum of low energy transfers enabled by the dynamics of invariant manifolds; specifically, the retrieval transfers target planar, vertical Lyapunov and halo orbit families associated with the collinear equilibrium points of the Sun-Earth Circular Restricted Three Body problem. The judicious use of these dynamical features provides the best opportunity to find extremely low energy Earth transfers for asteroid material. A catalogue of asteroid retrieval candidates is then presented. Despite the highly incomplete census of very small asteroids, the ERO catalogue can already be populated with 12 different objects retrievable with less than 500 m/s of Δ v. Moreover, the approach proposed represents a robust search and ranking methodology for future retrieval candidates that can be automatically applied to the growing survey of NEOs.

  20. Uterus retrieval process from brain dead donors.

    PubMed

    Gauthier, Tristan; Piver, Pascal; Pichon, Nicolas; Bibes, Romain; Guillaudeau, Angelique; Piccardo, Alessandro; Pesteil, Francis; Tricard, Jeremy; Gardet, Emmanuel; Laskar, Marc; Lalloué, Fabrice; Marquet, Pierre; Aubard, Yves

    2014-08-01

    To describe the feasibility of human uterus retrieval after donation after brain death. Single-center, prospective study. University hospital. Female brain dead donors. The families of female brain dead donors were informed about consent to uterus donation. A specific organ retrieval procedure was performed. At the end of the procedure the uterus was removed together with the hypogastric vessels, parametria, and vaginal fornix. The tolerance of the uterus to cold ischemia was evaluated with histology and TUNEL reaction up to 24 hours. Rate of uterus donation refusal. Between August 1, 2012 and July 31, 2013, seven uteri were retrieved from 14 female multiorgan donors. No refusal to uterus donation occurred. Our surgical protocol did not interfere with vital organ retrieval and was readily accepted by the other transplantation teams. The hypogastric vessels could be preserved in all cases but for one vein loss in the first retrieval. Histology studies did not find major morphologic changes after 24 hours of cold ischemia. Apoptosis was rare. Uterus retrieval could be part of a reproducible multiorgan procurement procedure. Uterus donation seems readily accepted. This preliminary study is a necessary step before any transplantation project. Copyright © 2014 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

  1. Retrieval-Based Learning: Positive Effects of Retrieval Practice in Elementary School Children.

    PubMed

    Karpicke, Jeffrey D; Blunt, Janell R; Smith, Megan A

    2016-01-01

    A wealth of research has demonstrated that practicing retrieval is a powerful way to enhance learning. However, nearly all prior research has examined retrieval practice with college students. Little is known about retrieval practice in children, and even less is known about possible individual differences in retrieval practice. In three experiments, 88 children (mean age 10 years) studied a list of words and either restudied the items or practiced retrieving them. They then took a final free recall test (Experiments 1 and 2) or recognition test (Experiment 3). In all experiments, children showed robust retrieval practice effects. Although a range of individual differences in reading comprehension and processing speed were observed among these children, the benefits of retrieval practice were independent of these factors. The results contribute to the growing body of research supporting the mnemonic benefits of retrieval practice and provide preliminary evidence that practicing retrieval may be an effective learning strategy for children with varying levels of reading comprehension and processing speed.

  2. Is the time interval between HCG administration and oocyte retrieval associated with oocyte retrieval rate?

    PubMed

    Bosdou, Julia K; Kolibianakis, Efstratios M; Venetis, Christos A; Zepiridis, Leonidas; Chatzimeletiou, Katerina; Makedos, Anastasios; Triantafyllidis, Stylianos; Masouridou, Sevasti; Mitsoli, Anna; Tarlatzis, Basil

    2015-11-01

    The aim of this study was to evaluate whether prolongation of the time interval between HCG administration and oocyte retrieval, from 36 h to 38 h, affects oocyte retrieval rate in women undergoing ovarian stimulation with gonadotrophins and GnRH antagonists for IVF. One hundred and fifty-six normo-ovulatory women were randomized to have oocyte retrieval performed 36 h (n = 78) or 38 h (n = 78) following HCG administration. Oocyte retrieval rate was defined as number of cumulus-oocyte-complex (COC) retrieved/follicle ≥ 11 mm present on day of HCG administration. No significant differences were observed between the groups regarding baseline characteristics. Moreover, no significant difference was observed between the groups regarding oocyte retrieval rate (difference: + 1.2%, 95% CI for difference between medians: -4.5 to +12.1). The median (95% CI for the median) was not significantly different between the groups regarding number of cumulus-oocyte-complexes (COCs) retrieved: 5.5 (5.0-7.0) versus 6.0 (5.0-6.2), respectively, and fertilization rates: 57.7% (50.0-66.7) versus 50.0% (44.8-65.5), respectively. Live birth rates were similar between the groups (20.5% versus 16.7%, RD: + 3.8%, 95% CI: -8.5 to +16.1, respectively). Prolongation of time interval between HCG administration and oocyte retrieval from 36 h to 38 h does not affect oocyte retrieval rate.

  3. Activities of information retrieval in Daicel Corporation : The roles and efforts of information retrieval team

    NASA Astrophysics Data System (ADS)

    Yamazaki, Towako

    In order to stabilize and improve quality of information retrieval service, the information retrieval team of Daicel Corporation has given some efforts on standard operating procedures, interview sheet for information retrieval, structured format for search report, and search expressions for some technological fields of Daicel. These activities and efforts will also lead to skill sharing and skill tradition between searchers. In addition, skill improvements are needed not only for a searcher individually, but also for the information retrieval team totally when playing searcher's new roles.

  4. Retrievable IVC Filters: Comprehensive Review of Device-related Complications and Advanced Retrieval Techniques.

    PubMed

    Desai, Kush R; Pandhi, Mithil B; Seedial, Stephen M; Errea, Martin F; Salem, Riad; Ryu, Robert K; Lewandowski, Robert J

    2017-01-01

    Use of retrievable inferior vena cava filters (RIVCFs) has grown exponentially since their introduction into clinical practice, but many of these devices are not retrieved. Some are not retrieved due to poor clinical follow-up, but other devices remain in situ for extended periods because they present significant technical challenges during retrieval. Because of these and other factors, many of these devices were thus left in place permanently. However, recent data have placed a renewed emphasis on device retrieval due to increased risk of RIVCF-related complications, which are positively correlated with filter dwell time. Development of advanced filter retrieval techniques has had a significant impact on the removal of embedded RIVCFs, permitting retrieval of the majority of devices. The purpose of this article is to present an imaging and data review of the dominant device-related factors that complicate RIVCF retrieval and to describe the relevant advanced retrieval techniques to manage these factors. RIVCF imaging is frequently encountered in daily clinical practice via various imaging modalities. Therefore, diagnostic radiologists can play a vital role in identifying filter-related issues. Familiarity with the context for managing these issues in the interventional suite is essential for improving triage and care of patients with RIVCFs. (©) RSNA, 2017.

  5. Retrieval-Based Learning: Positive Effects of Retrieval Practice in Elementary School Children

    PubMed Central

    Karpicke, Jeffrey D.; Blunt, Janell R.; Smith, Megan A.

    2016-01-01

    A wealth of research has demonstrated that practicing retrieval is a powerful way to enhance learning. However, nearly all prior research has examined retrieval practice with college students. Little is known about retrieval practice in children, and even less is known about possible individual differences in retrieval practice. In three experiments, 88 children (mean age 10 years) studied a list of words and either restudied the items or practiced retrieving them. They then took a final free recall test (Experiments 1 and 2) or recognition test (Experiment 3). In all experiments, children showed robust retrieval practice effects. Although a range of individual differences in reading comprehension and processing speed were observed among these children, the benefits of retrieval practice were independent of these factors. The results contribute to the growing body of research supporting the mnemonic benefits of retrieval practice and provide preliminary evidence that practicing retrieval may be an effective learning strategy for children with varying levels of reading comprehension and processing speed. PMID:27014156

  6. Aerosol and cloud retrieval using AATSR

    NASA Astrophysics Data System (ADS)

    Sogacheva, Larisa; Kolmonen, Pekka; Virtanen, Timo; Saponaro, Giulia; Kokhanovsky, Alexander; de Leeuw, Gerrit

    2013-04-01

    Aerosols and clouds play an important role in terrestrial atmospheric dynamics, thermodynamics, chemistry, and radiative transfer and are key elements of the water and energy cycles. Accurate evaluation of the effects of aerosols and clouds on climate requires global information on aerosol properties. Such global information can only be provided using satellite remote sensing. Among the satellite instruments used for aerosol and cloud retrieval is the Advanced Along-Track Scanning Radiometer (AATSR) on board the European Space Agency (ESA) satellite ENVISAT. Many instruments and retrieval techniques have been developed and applied to satellite data to derive cloud data products (Kokhanonsky et al., 2009). However, many problems still remain to be solved. They are mostly related to the usage of homogeneous, single-layered cloud model. Further issues exist for studies of thin clouds, where both cloud inhomogeniety, cloud fraction and the underlying surface bi-directional reflectance must be accounted for in the retrieval process. The aerosol retrieval algorithm (dual-view over land and single-view over ocean) was constructed for ATSR-2 data (e.g. Veefkind et al. 1998). The most recent version of ADV (AATSR Dual View) is described in Kolmenen et al. (2012). The ATSR dual-view allows retrieval without prior information about land surface reflectance. A semi-analytical cloud retrieval algorithm using backscattered radiation in 0.4-2.4 μm spectral region has recently been implemented to ADV for the determination of the optical thickness, the liquid water path, and the effective size of droplets from spectral measurements of the intensity of light reflected from water clouds with large optical thickness. In AacDV (AATSR aerosol and cloud Dual View) aerosol and cloud retrievals are combined. Cloud retrieval starts when cloud tests for aerosol retrieval show the presence of clouds. The algorithm was early introduced in Kokhanovsky et al. (2003). It works well for thick

  7. Transuranic (TRU) Waste Phase I Retrieval Plan

    SciTech Connect

    MCDONALD, K.M.

    2000-09-28

    From 1970 to 1987, TRU and suspect TRU wastes at Hanford were placed in the SWBG. At the time of placement in the SWBG these wastes were not regulated under existing Resource Conservation and Recovery Act (RCRA) regulations, since they were generated and disposed of prior to the effective date of RCRA at the Hanford Site (1987). From the standpoint of DOE Order 5820.2A1, the TRU wastes are considered retrievably stored, and current plans are to retrieve these wastes for shipment to WIPP for disposal. This plan provides a strategy for the Phase I retrieval that meets the intent of TPA milestone M-91 and Project W-113, and incorporates the lessons learned during TRU retrieval campaigns at Hanford, LANL, and SRS. As in the original Project W-113 plans, the current plan calls for examination of approximately 10,000 suspect-TRU drums located in the 218-W-4C burial ground followed by the retrieval of those drums verified to contain TRU waste. Unlike the older plan, however, this plan proposes an open-air retrieval scenario similar to those used for TRU drum retrieval at LANL and SRS. Phase I retrieval consists of the activities associated with the assessment of approximately 10,000 55-gallon drums of suspect TRU-waste in burial ground 218-W-4C and the retrieval of those drums verified to contain TRU waste. Four of the trenches in 218-W-4C (Trenches 1, 4, 20, and 29) are prime candidates for Phase I retrieval because they contain large numbers of suspect TRU drums, stacked from 2 to 5 drums high, on an asphalt pad. In fact, three of the trenches (Trenches 1 , 20, and 29) contain waste that has not been covered with soil, and about 1500 drums can be retrieved without excavation. The other three trenches in 218-W-4C (Trenches 7, 19, and 24) are not candidates for Phase I retrieval because they contain significant numbers of boxes. Drums will be retrieved from the four candidate trenches, checked for structural integrity, overpacked, if necessary, and assayed at the burial

  8. Can We Retrieve the Information Which Was Intentionally Forgotten? Electrophysiological Correlates of Strategic Retrieval in Directed Forgetting

    PubMed Central

    Mao, Xinrui; Tian, Mengxi; Liu, Yi; Li, Bingcan; Jin, Yan; Wu, Yanhong; Guo, Chunyan

    2017-01-01

    Retrieval inhibition hypothesis of directed forgetting effects assumed TBF (to-be-forgotten) items were not retrieved intentionally, while selective rehearsal hypothesis assumed the memory representation of retrieved TBF (to-be-forgotten) items was weaker than TBR (to-be-remembered) items. Previous studies indicated that directed forgetting effects of item-cueing method resulted from selective rehearsal at encoding, but the mechanism of retrieval inhibition that affected directed forgetting of TBF (to-be-forgotten) items was not clear. Strategic retrieval is a control process allowing the selective retrieval of target information, which includes retrieval orientation and strategic recollection. Retrieval orientation via the comparison of tasks refers to the specific form of processing resulted by retrieval efforts. Strategic recollection is the type of strategies to recollect studied items for the retrieval success of targets. Using a “directed forgetting” paradigm combined with a memory exclusion task, our investigation of strategic retrieval in directed forgetting assisted to explore how retrieval inhibition played a role on directed forgetting effects. When TBF items were targeted, retrieval orientation showed more positive ERPs to new items, indicating that TBF items demanded more retrieval efforts. The results of strategic recollection indicated that: (a) when TBR items were retrieval targets, late parietal old/new effects were only evoked by TBR items but not TBF items, indicating the retrieval inhibition of TBF items; (b) when TBF items were retrieval targets, the late parietal old/new effect were evoked by both TBR items and TBF items, indicating that strategic retrieval could overcome retrieval inhibition of TBF items. These findings suggested the modulation of strategic retrieval on retrieval inhibition of directed forgetting, supporting that directed forgetting effects were not only caused by selective rehearsal, but also retrieval inhibition. PMID

  9. Can We Retrieve the Information Which Was Intentionally Forgotten? Electrophysiological Correlates of Strategic Retrieval in Directed Forgetting.

    PubMed

    Mao, Xinrui; Tian, Mengxi; Liu, Yi; Li, Bingcan; Jin, Yan; Wu, Yanhong; Guo, Chunyan

    2017-01-01

    Retrieval inhibition hypothesis of directed forgetting effects assumed TBF (to-be-forgotten) items were not retrieved intentionally, while selective rehearsal hypothesis assumed the memory representation of retrieved TBF (to-be-forgotten) items was weaker than TBR (to-be-remembered) items. Previous studies indicated that directed forgetting effects of item-cueing method resulted from selective rehearsal at encoding, but the mechanism of retrieval inhibition that affected directed forgetting of TBF (to-be-forgotten) items was not clear. Strategic retrieval is a control process allowing the selective retrieval of target information, which includes retrieval orientation and strategic recollection. Retrieval orientation via the comparison of tasks refers to the specific form of processing resulted by retrieval efforts. Strategic recollection is the type of strategies to recollect studied items for the retrieval success of targets. Using a "directed forgetting" paradigm combined with a memory exclusion task, our investigation of strategic retrieval in directed forgetting assisted to explore how retrieval inhibition played a role on directed forgetting effects. When TBF items were targeted, retrieval orientation showed more positive ERPs to new items, indicating that TBF items demanded more retrieval efforts. The results of strategic recollection indicated that: (a) when TBR items were retrieval targets, late parietal old/new effects were only evoked by TBR items but not TBF items, indicating the retrieval inhibition of TBF items; (b) when TBF items were retrieval targets, the late parietal old/new effect were evoked by both TBR items and TBF items, indicating that strategic retrieval could overcome retrieval inhibition of TBF items. These findings suggested the modulation of strategic retrieval on retrieval inhibition of directed forgetting, supporting that directed forgetting effects were not only caused by selective rehearsal, but also retrieval inhibition.

  10. Noncompetitive retrieval practice causes retrieval-induced forgetting in cued recall but not in recognition.

    PubMed

    Grundgeiger, Tobias

    2014-04-01

    Retrieving a subset of learned items can lead to the forgetting of related items. Such retrieval-induced forgetting (RIF) can be explained by the inhibition of irrelevant items in order to overcome retrieval competition when the target item is retrieved. According to the retrieval inhibition account, such retrieval competition is a necessary condition for RIF. However, research has indicated that noncompetitive retrieval practice can also cause RIF by strengthening cue-item associations. According to the strength-dependent competition account, the strengthened items interfere with the retrieval of weaker items, resulting in impaired recall of weaker items in the final memory test. The aim of this study was to replicate RIF caused by noncompetitive retrieval practice and to determine whether this forgetting is also observed in recognition tests. In the context of RIF, it has been assumed that recognition tests circumvent interference and, therefore, should not be sensitive to forgetting due to strength-dependent competition. However, this has not been empirically tested, and it has been suggested that participants may reinstate learned cues as retrieval aids during the final test. In the present experiments, competitive practice or noncompetitive practice was followed by either final cued-recall tests or recognition tests. In cued-recall tests, RIF was observed in both competitive and noncompetitive conditions. However, in recognition tests, RIF was observed only in the competitive condition and was absent in the noncompetitive condition. The result underscores the contribution of strength-dependent competition to RIF. However, recognition tests seem to be a reliable way of distinguishing between RIF due to retrieval inhibition or strength-dependent competition.

  11. The Use of Semantic Links in Hypertext Information Retrieval.

    ERIC Educational Resources Information Center

    Frei, H. P.; Stieger, D.

    1995-01-01

    Highlights semantic links and shows how the semantic content of hypertext links can be used for information retrieval. Discussion includes indexing and retrieval algorithms that exploit link content and node content; retrieval strategies exploiting semantic links, including conventional retrieval and constrained spreading activation techniques;…

  12. Retrieval of atmospheric parameters from GOMOS data

    NASA Astrophysics Data System (ADS)

    Kyrölä, E.; Tamminen, J.; Sofieva, V.; Bertaux, J. L.; Hauchecorne, A.; Dalaudier, F.; Fussen, D.; Vanhellemont, F.; Fanton D'Andon, O.; Barrot, G.; Guirlet, M.; Mangin, A.; Blanot, L.; Fehr, T.; Saavedra de Miguel, L.; Fraisse, R.

    2010-12-01

    The Global Ozone Monitoring by Occultation of Stars (GOMOS) instrument on board the European Space Agency's ENVISAT satellite measures attenuation of stellar light in occultation geometry. Daytime measurements also record scattered solar light from the atmosphere. The wavelength regions are the ultraviolet-visible band 248-690 nm and two infrared bands at 755-774 nm and at 926-954 nm. From UV-Visible and IR spectra the vertical profiles of O3, NO2, NO3, H2O, O2 and aerosols can be retrieved. In addition there are two 1 kHz photometers at blue 473-527 nm and red 646-698 nm. Photometer data are used to correct spectrometer measurements for scintillations and to retrieve high resolution temperature profiles as well as gravity wave and turbulence parameters. Measurements cover altitude region 5-150 km. Atmospherically valid data are obtained in 15-100 km. In this paper we present an overview of the GOMOS retrieval algorithms for stellar occultation measurements. The low signal-to-noise ratio and the refractive effects due to the point source nature of stars have been important drivers in the development of GOMOS retrieval algorithms. We present first the Level 1b algorithms that are used to correct instrument related disturbances in the spectrometer and photometer measurements The Level 2 algorithms deal with the retrieval of vertical profiles of atmospheric gaseous constituents, aerosols and high resolution temperature. We divide the presentation into correction for refractive effects, high resolution temperature retrieval and spectral/vertical inversion. The paper also includes discussion about the GOMOS algorithm development, expected improvements, access to GOMOS data and alternative retrieval approaches.

  13. Retrieval of atmospheric parameters from GOMOS data

    NASA Astrophysics Data System (ADS)

    Kyrölä, E.; Tamminen, J.; Sofieva, V.; Bertaux, J. L.; Hauchecorne, A.; Dalaudier, F.; Fussen, D.; Vanhellemont, F.; Fanton D'Andon, O.; Barrot, G.; Guirlet, M.; Mangin, A.; Blanot, L.; Fehr, T.; Saavedra de Miguel, L.; Fraisse, R.

    2010-04-01

    The Global Ozone Monitoring by Occultation of Stars (GOMOS) instrument on board the European Space Agency's ENVISAT satellite measures attenuation of stellar light in occultation geometry. Daytime measurements also record scattered solar light from the atmosphere. The wavelength regions are the ultraviolet-visible band 248-690 nm and two infrared bands at 755-774 nm and at 926-954 nm. From UV-Visible and IR spectra the vertical profiles of O3, NO2, NO3, H2O, O2 and aerosols can be retrieved. In addition there are two 1 kHz photometers at blue 473-527 nm and red 646-698 nm. Photometer data are used to correct spectrometer measurements for scintillations and to retrieve high resolution temperature profiles as well as gravity wave and turbulence parameters. Measurements cover altitude region 5-150 km. Atmospherically valid data are obtained in 15-100 km. In this paper we present an overview of the GOMOS retrieval algorithms for stellar occultation measurements. The low signal-to-noise ratio and the refractive effects due to the point source nature of stars have been important drivers in the development of GOMOS retrieval algorithms. We present first the Level 1b algorithms that are used to correct instrument related disturbances in the spectrometer and photometer measurements The Level 2 algorithms deal with the retrieval of vertical profiles of atmospheric gaseous constituents, aerosols and high resolution temperature. We divide the presentation into correction for refractive effects, high resolution temperature retrieval and spectral/vertical inversion. The paper also includes discussion about the GOMOS algorithm development, expected improvements, access to GOMOS data and alternative retrieval approaches.

  14. Retrieval attempts enhance learning regardless of time spent trying to retrieve.

    PubMed

    Vaughn, Kalif E; Hausman, Hannah; Kornell, Nate

    2017-03-01

    Attempting to retrieve information from memory is an engaging cognitive activity. We predicted that people would learn more when they had spent more time attempting to retrieve. In experiments 1a and 1b, participants were shown trivia questions for 0, 5, 10, or 30 seconds and then the answer was revealed. They took a final test immediately or after 48 hours. Retrieval enhanced learning, but the length of the retrieval attempt had no effect (i.e., final test performance was equivalent in the 5-, 10-, and 30-second conditions and worse in the 0-second condition). During the initial retrieval attempt, more time did increase recall, suggesting that participants continued to engage in productive retrieval activities when given more time. Showing the answer for longer (7 versus 2 seconds) increased learning in Experiments 2a and 2b. Experiment 3 examined the effect of retrieval success and Experiment 4 replicated the results using different materials. These results have direct implications for current theories of retrieval.

  15. Challenging Conventional Assumptions of Automated Information Retrieval with Real Users: Boolean Searching and Batch Retrieval Evaluations.

    ERIC Educational Resources Information Center

    Hersh, William; Turpin, Andrew; Price, Susan; Kraemer, Dale; Olson, Daniel; Chan, Benjamin; Sacherek, Lynetta

    2001-01-01

    Describes research conducted at the TREC (Text Retrieval Conference) interactive track that compared Boolean and natural language searching, showing they achieved comparable results; and assessed the validity of batch-oriented retrieval evaluations, showing that the results from batch evaluations were not comparable to those obtained in…

  16. TOFIR: A Tool of Facilitating Information Retrieval - Introduce a Visual Retrieval Model.

    ERIC Educational Resources Information Center

    Zhang, Jin

    2001-01-01

    Introduces a new method for the visualization of information retrieval called TOFIR (Tool of Facilitating Information Retrieval). Discusses the use of angle attributes of a document to construct the angle-based visual space; two-dimensional and three-dimensional visual tools; ambiguity; and future research directions. (Author/LRW)

  17. Water vapor retrieval from OMI visible spectra

    NASA Astrophysics Data System (ADS)

    Wang, H.; Liu, X.; Chance, K.; Gonzalez Abad, G.; Miller, C. Chan

    2014-01-01

    There are distinct spectral features of water vapor in the wavelength range covered by the Ozone Monitoring Instrument (OMI) visible channel. Although these features are much weaker than those at longer wavelengths, they can be exploited to retrieve useful information about water vapor. They have an advantage in that their small optical depth leads to fairly simple interpretation as measurements of the total water vapor column density. We have used the Smithsonian Astrophysical Observatory (SAO)'s OMI operational retrieval algorithm to derive the Slant Column Density (SCD) of water vapor from OMI measurements using the 430-480 nm spectral region after extensive optimization of retrieval windows and parameters. The Air Mass Factor (AMF) is calculated using look-up tables of scattering weights and monthly mean water vapor profiles from the GEOS-5 assimilation products. We convert from SCD to Vertical Column Density (VCD) using the AMF and generate associated retrieval averaging kernels and shape factors. Our standard water vapor product has a median SCD of ~ 1.3 × 1023 molecule cm-2 and a median relative uncertainty of ~ 11% in the tropics, about a factor of 2 better than that from a similar OMI algorithm but using narrower retrieval window. The corresponding median VCD is ~ 1.2 × 1023 molecule cm-2. We have also explored the sensitivities to various parameters and compared our results with those from the Moderate-resolution Imaging Spectroradiometer (MODIS) and the Aerosol Robotic NETwork (AERONET).

  18. Ultraspectral Sounding Retrieval Error Budget and Estimation

    NASA Technical Reports Server (NTRS)

    Zhou, Daniel K.; Larar, Allen M.; Liu, Xu; Smith, William L.; Strow, L. Larrabee; Yang, Ping

    2011-01-01

    The ultraspectral infrared radiances obtained from satellite observations provide atmospheric, surface, and/or cloud information. The intent of the measurement of the thermodynamic state is the initialization of weather and climate models. Great effort has been given to retrieving and validating these atmospheric, surface, and/or cloud properties. Error Consistency Analysis Scheme (ECAS), through fast radiative transfer model (RTM) forward and inverse calculations, has been developed to estimate the error budget in terms of absolute and standard deviation of differences in both spectral radiance and retrieved geophysical parameter domains. The retrieval error is assessed through ECAS without assistance of other independent measurements such as radiosonde data. ECAS re-evaluates instrument random noise, and establishes the link between radiometric accuracy and retrieved geophysical parameter accuracy. ECAS can be applied to measurements of any ultraspectral instrument and any retrieval scheme with associated RTM. In this paper, ECAS is described and demonstration is made with the measurements of the METOP-A satellite Infrared Atmospheric Sounding Interferometer (IASI)..

  19. Percutaneous Retrieval of Chronic Intravascular Foreign Bodies

    SciTech Connect

    Savage, Clare; Ozkan, Orhan S.; Walser, Eric M.; Wang Dongfang; Zwischenberger, Joseph B.

    2003-09-15

    To evaluate the feasibility of intravascular retrieval of chronic foreign bodies, we retrospectively reviewed an 8 year experience (1993-2001) of percutaneous retrieval of chronically retained intravascular foreign bodies (n = 6). In 6 of 6 cases (4 catheter fragments, 2 guidewires), 5-90 days elapsed before retrieval via the femoral or internal jugular vein. Under fluoroscopy, we determined the foreign body's course, position and size. A guidewire was advanced through a multipurpose catheter to the foreign body. The multipurpose catheter was replaced with a gooseneck snare catheter and the snare advanced to grasp and remove the foreign body. Percutaneous retrieval was successful in all 6 cases. One patient experienced mild hemoptysis, which resolved within 24 hr of observation. No patient experienced long-term sequelae. Given the potential life-threatening complications from intravascular foreign bodies and the low complication rate from percutaneous retrieval, we recommend extraction of the foreign body even if it is asymptomatic in the chronic setting (> 24 hr)

  20. Web information retrieval based on ontology

    NASA Astrophysics Data System (ADS)

    Zhang, Jian

    2013-03-01

    The purpose of the Information Retrieval (IR) is to find a set of documents that are relevant for a specific information need of a user. Traditional Information Retrieval model commonly used in commercial search engine is based on keyword indexing system and Boolean logic queries. One big drawback of traditional information retrieval is that they typically retrieve information without an explicitly defined domain of interest to the users so that a lot of no relevance information returns to users, which burden the user to pick up useful answer from these no relevance results. In order to tackle this issue, many semantic web information retrieval models have been proposed recently. The main advantage of Semantic Web is to enhance search mechanisms with the use of Ontology's mechanisms. In this paper, we present our approach to personalize web search engine based on ontology. In addition, key techniques are also discussed in our paper. Compared to previous research, our works concentrate on the semantic similarity and the whole process including query submission and information annotation.

  1. Biomartr: genomic data retrieval with R.

    PubMed

    Drost, Hajk-Georg; Paszkowski, Jerzy

    2017-04-15

    Retrieval and reproducible functional annotation of genomic data are crucial in biology. However, the current poor usability and transparency of retrieval methods hinders reproducibility. Here we present an open source R package, biomartr , which provides a comprehensive easy-to-use framework for automating data retrieval and functional annotation for meta-genomic approaches. The functions of biomartr achieve a high degree of clarity, transparency and reproducibility of analyses. The biomartr package implements straightforward functions for bulk retrieval of all genomic data or data for selected genomes, proteomes, coding sequences and annotation files present in databases hosted by the National Center for Biotechnology Information (NCBI) and European Bioinformatics Institute (EMBL-EBI). In addition, biomartr communicates with the BioMart database for functional annotation of retrieved sequences. Comprehensive documentation of biomartr functions and five tutorial vignettes provide step-by-step instructions on how to use the package in a reproducible manner. The open source biomartr package is available at https://github.com/HajkD/biomartr and https://cran.r-project.org/web/packages/biomartr/index.html . hgd23@cam.ac.uk. Supplementary data are available at Bioinformatics online.

  2. Between-systems memory interference during retrieval.

    PubMed

    Sparks, Fraser T; Lehmann, Hugo; Sutherland, Robert J

    2011-09-01

    Context memories normally depend on the hippocampus (HPC) but, in the absence of the HPC, other memory systems are capable of acquiring and supporting these memories. This suggests that the HPC can interfere with other systems during memory acquisition. Here we ask whether the HPC can also interfere with the retrieval of a context memory that was independently acquired by a non-HPC system. Specifically, we assess whether the HPC can impair the retrieval of a contextual fear-conditioning memory that was acquired while the HPC was temporarily inactive. Rats were infused with the γ-aminobutyric acid (GABA)(A) receptor agonist muscimol in the dorsal and ventral HPC either before acquisition, retrieval, or prior to both acquisition and retrieval, consistent with the effects of permanent HPC lesions on contextual fear conditioning, if the HPC was inactive at the time of acquisition and retention memory was intact. Thus, non-HPC systems acquired and supported this memory in absence of the HPC. However, if the HPC was inactive during acquisition but active thereafter, rats displayed severe deficits during the retention test. Moreover, when the same rats received a second retention test but with the HPC inactive at this time, the memory was recovered, suggesting that removal of a form of interference allowed the memory to be expressed. Combined, these findings imply that the HPC competes and/or interferes with retrieval of a long-term memory that was established in non-HPC systems.

  3. AIRS Retrieval Validation During the EAQUATE

    NASA Technical Reports Server (NTRS)

    Zhou, Daniel K.; Smith, William L.; Cuomo, Vincenzo; Taylor, Jonathan P.; Barnet, Christopher D.; DiGirolamo, Paolo; Pappalardo, Gelsomina; Larar, Allen M.; Liu, Xu; Newman, Stuart M.

    2006-01-01

    Atmospheric and surface thermodynamic parameters retrieved with advanced hyperspectral remote sensors of Earth observing satellites are critical for weather prediction and scientific research. The retrieval algorithms and retrieved parameters from satellite sounders must be validated to demonstrate the capability and accuracy of both observation and data processing systems. The European AQUA Thermodynamic Experiment (EAQUATE) was conducted mainly for validation of the Atmospheric InfraRed Sounder (AIRS) on the AQUA satellite, but also for assessment of validation systems of both ground-based and aircraft-based instruments which will be used for other satellite systems such as the Infrared Atmospheric Sounding Interferometer (IASI) on the European MetOp satellite, the Cross-track Infrared Sounder (CrIS) from the NPOESS Preparatory Project and the following NPOESS series of satellites. Detailed inter-comparisons were conducted and presented using different retrieval methodologies: measurements from airborne ultraspectral Fourier transform spectrometers, aircraft in-situ instruments, dedicated dropsondes and radiosondes, and ground based Raman Lidar, as well as from the European Center for Medium range Weather Forecasting (ECMWF) modeled thermal structures. The results of this study not only illustrate the quality of the measurements and retrieval products but also demonstrate the capability of these validation systems which are put in place to validate current and future hyperspectral sounding instruments and their scientific products.

  4. On-Line Retrieval System Design; Part V of Scientific Report No. ISR-18, Information Storage and Retrieval...

    ERIC Educational Resources Information Center

    Cornell Univ., Ithaca, NY. Dept. of Computer Science.

    On-line retrieval system design is discussed in the two papers which make up Part Five of this report on Salton's Magical Automatic Retriever of Texts (SMART) project report. The first paper: "A Prototype On-Line Document Retrieval System" by D. Williamson and R. Williamson outlines a design for a SMART on-line document retrieval system…

  5. Respiratory-Induced Haemodynamic Changes: A Contributing Factor to IVC Filter Penetration.

    PubMed

    Laborda, Alicia; Kuo, William T; Ioakeim, Ignatios; De Blas, Ignacio; Malvè, Mauro; Lahuerta, Celia; De Gregorio, Miguel A

    2015-10-01

    The purpose of the study is to evaluate the influence of respiratory-induced vena caval hemodynamic changes on filter migration/penetration. After placement of either a Gunther Tulip or Celect IVC filter, 101 consecutive patients scheduled for filter retrieval were prospectively enrolled in this study. Pre-retrieval CT scans were used to assess filter complications and to calculate cross-sectional area in three locations: at level of filter strut fixation, 3 cm above and 3 cm below. A 3D finite element simulation was constructed on these data and direct IVC pressure was recorded during filter retrieval. Cross-sectional areas and pressures of the vena cava were measured during neutral breathing and in Valsalva maneuver and identified filter complications were recorded. A statistical analysis of these variables was then performed. During Valsalva maneuvers, a 60 % decrease of the IVC cross-sectional area and a fivefold increase in the IVC pressure were identified (p < 0.001). There was a statistically significant difference in the reduction of the cross-sectional area at the filter strut level (p < 0.001) in patient with filter penetration. Difficulty in filter retrieval was higher in penetrated or tilted filters (p < 0.001; p = 0.005). 3D computational models showed significant IVC deformation around the filter during Valsalva maneuver. Caval morphology and hemodynamics are clearly affected by Valsalva maneuvers. A physiological reduction of IVC cross-sectional area is associated with higher risk of filter penetration, despite short dwell times. Physiologic data should be used to improve future filter designs to remain safely implanted over longer dwell times.

  6. Respiratory-Induced Haemodynamic Changes: A Contributing Factor to IVC Filter Penetration

    SciTech Connect

    Laborda, Alicia; Kuo, William T.; Ioakeim, Ignatios; De Blas, Ignacio; Malvè, Mauro; Lahuerta, Celia De Gregorio, Miguel A.

    2015-10-15

    PurposeThe purpose of the study is to evaluate the influence of respiratory-induced vena caval hemodynamic changes on filter migration/penetration.Materials and MethodsAfter placement of either a Gunther Tulip or Celect IVC filter, 101 consecutive patients scheduled for filter retrieval were prospectively enrolled in this study. Pre-retrieval CT scans were used to assess filter complications and to calculate cross-sectional area in three locations: at level of filter strut fixation, 3 cm above and 3 cm below. A 3D finite element simulation was constructed on these data and direct IVC pressure was recorded during filter retrieval. Cross-sectional areas and pressures of the vena cava were measured during neutral breathing and in Valsalva maneuver and identified filter complications were recorded. A statistical analysis of these variables was then performed.ResultsDuring Valsalva maneuvers, a 60 % decrease of the IVC cross-sectional area and a fivefold increase in the IVC pressure were identified (p < 0.001). There was a statistically significant difference in the reduction of the cross-sectional area at the filter strut level (p < 0.001) in patient with filter penetration. Difficulty in filter retrieval was higher in penetrated or tilted filters (p < 0.001; p = 0.005). 3D computational models showed significant IVC deformation around the filter during Valsalva maneuver.ConclusionCaval morphology and hemodynamics are clearly affected by Valsalva maneuvers. A physiological reduction of IVC cross-sectional area is associated with higher risk of filter penetration, despite short dwell times. Physiologic data should be used to improve future filter designs to remain safely implanted over longer dwell times.

  7. Extinction learning, which consists of the inhibition of retrieval, can be learned without retrieval.

    PubMed

    de Carvalho Myskiw, Jociane; Furini, Cristiane Regina Guerino; Schmidt, Bianca; Ferreira, Flávia; Izquierdo, Ivan

    2015-01-13

    In the present study we test the hypothesis that extinction is not a consequence of retrieval in unreinforced conditioned stimulus (CS) presentation but the mere perception of the CS in the absence of a conditioned response. Animals with cannulae implanted in the CA1 region of hippocampus were subjected to extinction of contextual fear conditioning. Muscimol infused intra-CA1 before an extinction training session of contextual fear conditioning (CFC) blocks retrieval but not consolidation of extinction measured 24 h later. Additionally, this inhibition of retrieval does not affect early persistence of extinction when tested 7 d later or its spontaneous recovery after 2 wk. Furthermore, both anisomycin, an inhibitor of ribosomal protein synthesis, and rapamycin, an inhibitor of extraribosomal protein synthesis, given into the CA1, impair extinction of CFC regardless of whether its retrieval was blocked by muscimol. Therefore, retrieval performance in the first unreinforced session is not necessary for the installation, maintenance, or spontaneous recovery of extinction of CFC.

  8. Dissociating retrieval success from incidental encoding activity during emotional memory retrieval, in the medial temporal lobe

    PubMed Central

    Shafer, Andrea T.; Dolcos, Florin

    2014-01-01

    The memory-enhancing effect of emotion has been linked to the engagement of emotion- and memory-related medial temporal lobe (MTL) regions (amygdala-AMY; hippocampus-HC; parahippocampus-PHC), during both encoding and retrieval. However, recognition tasks used to investigate the neural correlates of retrieval make it difficult to distinguish MTL engagement linked to retrieval success (RS) from that linked to incidental encoding success (ES) during retrieval. This issue has been investigated for retrieval of non-emotional memories, but not for emotional memory retrieval. To address this, we used event-related functional MRI in conjunction with an emotional distraction and two episodic memory tasks (one testing memory for distracter items and the other testing memory for new/lure items presented in the first memory task). This paradigm allowed for dissociation of MTL activity specifically linked to RS from that linked to both RS and incidental ES during retrieval. There were two novel findings regarding the neural correlates of emotional memory retrieval. First, greater emotional RS was identified bilaterally in AMY, HC, and PHC. However, AMY activity was most impacted when accounting for ES activity, as only RS activity in left AMY was dissociated from ES activity during retrieval, whereas portions of HC and PHC showing greater emotional RS were largely uninvolved in ES. Second, an earlier and more anteriorly spread response (left AMY and bilateral HC, PHC) was linked to greater emotional RS activity, whereas a later and more posteriorly localized response (right posterior PHC) was linked to greater neutral RS activity. These findings shed light on MTL mechanisms subserving the memory-enhancing effect of emotion at retrieval. PMID:24917798

  9. Retrieval of embolized left atrial appendage devices.

    PubMed

    Fahmy, Peter; Eng, Lim; Saw, Jacqueline

    2016-09-28

    Percutaneous left atrial appendage (LAA) closure is gaining interest as an alternative option for prevention of strokes in patients with Atrial Fibrillation (AF), especially for those with contraindications to anticoagulation. Complications from these procedures are well described in the medical literature. LAA closures may lead to pericardial effusion, device-associated thrombus, and device embolization. Understanding the reasons for embolization, strategies to avoid embolization, and the techniques for retrieval of LAA devices (ACP/AMULET and WATCHMAN) should be appreciated by endovascular implanters. We describe two cases of LAA device embolization that were both successfully retrieved percutaneously and other percutaneous techniques to safely retrieve embolized LAA devices. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  10. DOLPHIn—Dictionary Learning for Phase Retrieval

    NASA Astrophysics Data System (ADS)

    Tillmann, Andreas M.; Eldar, Yonina C.; Mairal, Julien

    2016-12-01

    We propose a new algorithm to learn a dictionary for reconstructing and sparsely encoding signals from measurements without phase. Specifically, we consider the task of estimating a two-dimensional image from squared-magnitude measurements of a complex-valued linear transformation of the original image. Several recent phase retrieval algorithms exploit underlying sparsity of the unknown signal in order to improve recovery performance. In this work, we consider such a sparse signal prior in the context of phase retrieval, when the sparsifying dictionary is not known in advance. Our algorithm jointly reconstructs the unknown signal - possibly corrupted by noise - and learns a dictionary such that each patch of the estimated image can be sparsely represented. Numerical experiments demonstrate that our approach can obtain significantly better reconstructions for phase retrieval problems with noise than methods that cannot exploit such "hidden" sparsity. Moreover, on the theoretical side, we provide a convergence result for our method.

  11. Phase retrieval by coherent modulation imaging

    SciTech Connect

    Zhang, Fucai; Chen, Bo; Morrison, Graeme R.; Vila-Comamala, Joan; Guizar-Sicairos, Manuel; Robinson, Ian K.

    2016-11-18

    Phase retrieval is a long-standing problem in imaging when only the intensity of the wavefield can be recorded. Coherent diffraction imaging (CDI) is a lensless technique that uses iterative algorithms to recover amplitude and phase contrast images from diffraction intensity data. For general samples, phase retrieval from a single diffraction pattern has been an algorithmic and experimental challenge. Here we report a method of phase retrieval that uses a known modulation of the sample exit-wave. This coherent modulation imaging (CMI) method removes inherent ambiguities of CDI and uses a reliable, rapidly converging iterative algorithm involving three planes. It works for extended samples, does not require tight support for convergence, and relaxes dynamic range requirements on the detector. CMI provides a robust method for imaging in materials and biological science, while its single-shot capability will benefit the investigation of dynamical processes with pulsed sources, such as X-ray free electron laser.

  12. Spatial resolution and cloud optical thickness retrievals

    NASA Technical Reports Server (NTRS)

    Feind, Rand E.; Christopher, Sundar A.; Welch, Ronald M.

    1992-01-01

    The impact of sensor spatial resolution and accurate cloud pixel identification on cloud property retrievals was investigated. Twelve fair weather cumulus (FWC) scenes of high spectral and spatial resolution Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) data are analyzed. A variation of the 3-band ratio technique of Gao and Goetz is used to discriminate clouds from the background, and then a discrete ordinate radiative transfer model is used to obtain optical thickness of cloudy regions for each scene. To study the effect of spatial resolution upon retrieved optical thickness, the 20 m AVIRIS data was spatially degraded to spatial resolutions ranging from 40 to 960 m. Cloud area, scene average optical thickness, and distribution of retrieved optical thickness are determined at each spatial resolution. Finally, a comparison between the 3-band ratio technique and monospectral reflectance thresholding, using 20 m spatial resolution data, is presented.

  13. Phase retrieval from single biomolecule diffraction pattern.

    PubMed

    Ikeda, Shiro; Kono, Hidetoshi

    2012-02-13

    In this paper, we propose the SPR (sparse phase retrieval) method, which is a new phase retrieval method for coherent x-ray diffraction imaging (CXDI). Conventional phase retrieval methods effectively solve the problem for high signal-to-noise ratio measurements, but would not be sufficient for single biomolecular imaging which is expected to be realized with femto-second x-ray free electron laser pulses. The SPR method is based on the Bayesian statistics. It does not need to set the object boundary constraint that is required by the commonly used hybrid input-output (HIO) method, instead a prior distribution is defined with an exponential distribution and used for the estimation. Simulation results demonstrate that the proposed method reconstructs the electron density under a noisy condition even some central pixels are masked.

  14. Hippocampal awake replay in fear memory retrieval

    PubMed Central

    Wu, Chun-Ting; Haggerty, Daniel; Kemere, Caleb; Ji, Daoyun

    2017-01-01

    Hippocampal place cells are key to episodic memories. How these cells participate in memory retrieval remains unclear. Here, after rats acquired a fear memory by receiving mild foot-shocks at a shock zone of a track, we analyzed place cells when the animals were placed back to the track and displayed an apparent memory retrieval behavior: avoidance of the shock zone. We found that place cells representing the shock zone were reactivated, despite the fact that the animals did not enter the shock zone. This reactivation occurred in ripple-associated awake replay of place cell sequences encoding the paths from the animal’s current positions to the shock zone, but not in place cell sequences within individual cycles of theta oscillation. The result reveals a specific place cell pattern underlying the inhibitory avoidance behavior and provides strong evidence for the involvement of awake replay in fear memory retrieval. PMID:28218916

  15. Volumetric Geophysical Retrievals in Precipitating Cloud Systems

    NASA Astrophysics Data System (ADS)

    Collis, S. M.; North, K. W.; Jensen, M. P.; Kollias, P.; Williams, C. R.; Bharadwaj, N.; Fridlind, A. M.; Widener, K.; Giangrande, S.

    2011-12-01

    Cloud and climate modeling efforts focused around the Mid-Latitude Continental Convective Clouds Experiment (MC3E) require the retrieval of high quality geophysical parameters pertinent to storm microphysical and dynamical properties. The installation of high resolution polarimetric X- and C-Band scanning radars have greatly enhanced measurements at the Atmospheric Radiation Measurement Southern Great Plain site, however, the volumetric data collected by these sensors is only indirectly related to storm properties. This presentation will outline efforts towards creating a suite of model-like Value Added Products (VAPs) for MC3E derived using existing and new retrieval techniques. Particular focus will be on retrieval of storm dynamics, precipitation microphysics and rainfall accumulations from the scanning radar measurements. Algorithm details and verification efforts will be showcased as well as a timetable for data availability.

  16. Phase retrieval by coherent modulation imaging

    PubMed Central

    Zhang, Fucai; Chen, Bo; Morrison, Graeme R.; Vila-Comamala, Joan; Guizar-Sicairos, Manuel; Robinson, Ian K.

    2016-01-01

    Phase retrieval is a long-standing problem in imaging when only the intensity of the wavefield can be recorded. Coherent diffraction imaging is a lensless technique that uses iterative algorithms to recover amplitude and phase contrast images from diffraction intensity data. For general samples, phase retrieval from a single-diffraction pattern has been an algorithmic and experimental challenge. Here we report a method of phase retrieval that uses a known modulation of the sample exit wave. This coherent modulation imaging method removes inherent ambiguities of coherent diffraction imaging and uses a reliable, rapidly converging iterative algorithm involving three planes. It works for extended samples, does not require tight support for convergence and relaxes dynamic range requirements on the detector. Coherent modulation imaging provides a robust method for imaging in materials and biological science, while its single-shot capability will benefit the investigation of dynamical processes with pulsed sources, such as X-ray free-electron lasers. PMID:27857061

  17. Hippocampal awake replay in fear memory retrieval.

    PubMed

    Wu, Chun-Ting; Haggerty, Daniel; Kemere, Caleb; Ji, Daoyun

    2017-04-01

    Hippocampal place cells are key to episodic memories. How these cells participate in memory retrieval remains unclear. After rats acquired a fear memory by receiving mild footshocks in a shock zone on a track, we analyzed place cells when the animals were placed on the track again and displayed an apparent memory retrieval behavior: avoidance of the shock zone. We found that place cells representing the shock zone were reactivated, despite the fact that the animals did not enter the shock zone. This reactivation occurred in ripple-associated awake replay of place cell sequences encoding the paths from the animal's current positions to the shock zone but not in place cell sequences within individual cycles of theta oscillation. The result reveals a specific place-cell pattern underlying inhibitory avoidance behavior and provides strong evidence for the involvement of awake replay in fear memory retrieval.

  18. Context vector approach to image retrieval

    NASA Astrophysics Data System (ADS)

    Ren, Clara Z.; Means, Robert W.

    1998-04-01

    HNC developed a unique context vector approach to image retrieval in Image Contrast Addressable Retrieval System. The basis for this approach is the context vector approach to image representation. A context vector is a high dimensional vector of real numbers, derived from a set of features that are useful in discriminating between images in a particular domain. The image features are trained based upon the constrained 2D self-organizing learning law. The image context vector encodes both intra-image features and inter-image relationship. The similarity in the directions of the context vectors of a pair of images indicates their similarity of content. The context vector approach to image representation simplifies the image and retrieval indexing problem because simple Euclidean distance measurements between sets of context vectors are used as a measure of similarity.

  19. Phase retrieval by coherent modulation imaging.

    PubMed

    Zhang, Fucai; Chen, Bo; Morrison, Graeme R; Vila-Comamala, Joan; Guizar-Sicairos, Manuel; Robinson, Ian K

    2016-11-18

    Phase retrieval is a long-standing problem in imaging when only the intensity of the wavefield can be recorded. Coherent diffraction imaging is a lensless technique that uses iterative algorithms to recover amplitude and phase contrast images from diffraction intensity data. For general samples, phase retrieval from a single-diffraction pattern has been an algorithmic and experimental challenge. Here we report a method of phase retrieval that uses a known modulation of the sample exit wave. This coherent modulation imaging method removes inherent ambiguities of coherent diffraction imaging and uses a reliable, rapidly converging iterative algorithm involving three planes. It works for extended samples, does not require tight support for convergence and relaxes dynamic range requirements on the detector. Coherent modulation imaging provides a robust method for imaging in materials and biological science, while its single-shot capability will benefit the investigation of dynamical processes with pulsed sources, such as X-ray free-electron lasers.

  20. Simaltaneous Retrieval System for "Kanji" and "Kana"

    NASA Astrophysics Data System (ADS)

    Nakajima, Ayetsu; Matsuda, Masahisa; Kanagawa, Arata

    The ABC News Information Retrieval System was developed by Asahi Broadcasting Corporation and has been in operation since October 1985. The system is designed to give people involved in the News Department easy access to library sources such as news films and video tapes. It has an initial file size of 100,000 items with a monthly update of 900 records. The system also has an interactive free keyword information retrieval system featuring keyword entry in Kanji (Japanese ideographs) for online retrieval in Kanji and Kana (Japanese syllabic symbols). In addition, it employs automatic sampling software enabling relevant keywords to be extracted from the contents of the database. Each record consist of a title, news summary and a description of visual materials, providing content references concerning a certain incident, accident or event which took place, and a brief description of each.

  1. Phase retrieval by coherent modulation imaging

    NASA Astrophysics Data System (ADS)

    Zhang, Fucai; Chen, Bo; Morrison, Graeme R.; Vila-Comamala, Joan; Guizar-Sicairos, Manuel; Robinson, Ian K.

    2016-11-01

    Phase retrieval is a long-standing problem in imaging when only the intensity of the wavefield can be recorded. Coherent diffraction imaging is a lensless technique that uses iterative algorithms to recover amplitude and phase contrast images from diffraction intensity data. For general samples, phase retrieval from a single-diffraction pattern has been an algorithmic and experimental challenge. Here we report a method of phase retrieval that uses a known modulation of the sample exit wave. This coherent modulation imaging method removes inherent ambiguities of coherent diffraction imaging and uses a reliable, rapidly converging iterative algorithm involving three planes. It works for extended samples, does not require tight support for convergence and relaxes dynamic range requirements on the detector. Coherent modulation imaging provides a robust method for imaging in materials and biological science, while its single-shot capability will benefit the investigation of dynamical processes with pulsed sources, such as X-ray free-electron lasers.

  2. Annotation and retrieval of clinically relevant images.

    PubMed

    Demner-Fushman, Dina; Antani, Sameer; Simpson, Matthew; Thoma, George R

    2009-12-01

    Medical images are a significant information source for clinical decision-making. Currently available information retrieval and decision support systems rely primarily on the text of scientific publications to find evidence in support of clinical information needs. The images and illustrations are available only within the full text of a scientific publication and do not directly contribute evidence to such systems. Our first goal is to explore whether image features facilitate finding relevant images that appear in publications. Our second goal is to find promising approaches for providing clinical evidence at the point of service, leveraging information contained in the text and images. We studied two approaches to finding illustrative evidence: a supervised machine-learning approach, in which images are classified as being relevant to an information need or not, and a pipeline information retrieval approach, in which images were retrieved using associated text and then re-ranked using content-based image retrieval (CBIR) techniques. Our information retrieval approach did not benefit from combining textual and image information. However, given sufficient training data for the machine-learning approach, we achieved 56% average precision at 94% recall using textual features, and 27% average precision at 86% recall using image features. Combining these classifiers resulted in improvement up to 81% precision at 96% recall (74% recall at 85% precision, on average) for the requests with over 180 positive training examples. Our supervised machine-learning methods that combine information from image and text are capable of achieving image annotation and retrieval accuracy acceptable for providing clinical evidence, given sufficient training data.

  3. Annotation and retrieval of clinically relevant images

    PubMed Central

    Demner-Fushman, Dina; Antani, Sameer; Simpson, Matthew; Thoma, George R.

    2009-01-01

    Purpose Medical images are a significant information source for clinical decision making. Currently available information retrieval and decision support systems rely primarily on the text of scientific publications to find evidence in support of clinical information needs. The images and illustrations are available only within the full text of a scientific publication and do not directly contribute evidence to such systems. Our first goal is to explore whether image features facilitate finding relevant images that appear in publications. Our second goal is to find promising approaches for providing clinical evidence at the point of service, leveraging information contained in the text and images. Methods We studied two approaches to finding illustrative evidence: a supervised machine learning approach, in which images are classified as being relevant to an information need or not, and a pipeline information retrieval approach, in which images were retrieved using associated text and then re-ranked using content-based image retrieval (CBIR) techniques. Results Our information retrieval approach did not benefit from combining textual and image information. However, given sufficient training data for the machine learning approach, we achieved 56% average precision at 94% recall using textual features, and 27% average precision at 86% recall using image features. Combining these classifiers resulted in improvement up to 81% precision at 96% recall (74% recall at 85% precision, on average) for the requests with over 180 positive training examples. Conclusions Our supervised machine learning methods that combine information from image and text are capable of achieving image annotation and retrieval accuracy acceptable for providing clinical evidence, given sufficient training data. PMID:19546026

  4. Evolutionary Computing Methods for Spectral Retrieval

    NASA Technical Reports Server (NTRS)

    Terrile, Richard; Fink, Wolfgang; Huntsberger, Terrance; Lee, Seugwon; Tisdale, Edwin; VonAllmen, Paul; Tinetti, Geivanna

    2009-01-01

    A methodology for processing spectral images to retrieve information on underlying physical, chemical, and/or biological phenomena is based on evolutionary and related computational methods implemented in software. In a typical case, the solution (the information that one seeks to retrieve) consists of parameters of a mathematical model that represents one or more of the phenomena of interest. The methodology was developed for the initial purpose of retrieving the desired information from spectral image data acquired by remote-sensing instruments aimed at planets (including the Earth). Examples of information desired in such applications include trace gas concentrations, temperature profiles, surface types, day/night fractions, cloud/aerosol fractions, seasons, and viewing angles. The methodology is also potentially useful for retrieving information on chemical and/or biological hazards in terrestrial settings. In this methodology, one utilizes an iterative process that minimizes a fitness function indicative of the degree of dissimilarity between observed and synthetic spectral and angular data. The evolutionary computing methods that lie at the heart of this process yield a population of solutions (sets of the desired parameters) within an accuracy represented by a fitness-function value specified by the user. The evolutionary computing methods (ECM) used in this methodology are Genetic Algorithms and Simulated Annealing, both of which are well-established optimization techniques and have also been described in previous NASA Tech Briefs articles. These are embedded in a conceptual framework, represented in the architecture of the implementing software, that enables automatic retrieval of spectral and angular data and analysis of the retrieved solutions for uniqueness.

  5. The operational methane retrieval algorithm for TROPOMI

    NASA Astrophysics Data System (ADS)

    Hu, Haili; Hasekamp, Otto; Butz, André; Galli, André; Landgraf, Jochen; Aan de Brugh, Joost; Borsdorff, Tobias; Scheepmaker, Remco; Aben, Ilse

    2016-11-01

    This work presents the operational methane retrieval algorithm for the Sentinel 5 Precursor (S5P) satellite and its performance tested on realistic ensembles of simulated measurements. The target product is the column-averaged dry air volume mixing ratio of methane (XCH4), which will be retrieved simultaneously with scattering properties of the atmosphere. The algorithm attempts to fit spectra observed by the shortwave and near-infrared channels of the TROPOspheric Monitoring Instrument (TROPOMI) spectrometer aboard S5P.The sensitivity of the retrieval performance to atmospheric scattering properties, atmospheric input data and instrument calibration errors is evaluated. In addition, we investigate the effect of inhomogeneous slit illumination on the instrument spectral response function. Finally, we discuss the cloud filters to be used operationally and as backup.We show that the required accuracy and precision of < 1 % for the XCH4 product are met for clear-sky measurements over land surfaces and after appropriate filtering of difficult scenes. The algorithm is very stable, having a convergence rate of 99 %. The forward model error is less than 1 % for about 95 % of the valid retrievals. Model errors in the input profile of water do not influence the retrieval outcome noticeably. The methane product is expected to meet the requirements if errors in input profiles of pressure and temperature remain below 0.3 % and 2 K, respectively. We further find that, of all instrument calibration errors investigated here, our retrievals are the most sensitive to an error in the instrument spectral response function of the shortwave infrared channel.

  6. Logistics and safety of extracorporeal membrane oxygenation in medical retrieval.

    PubMed

    Burns, Brian J; Habig, Karel; Reid, Cliff; Kernick, Paul; Wilkinson, Chris; Tall, Gary; Coombes, Sarah; Manning, Ron

    2011-01-01

    This article reviews the logistics and safety of extracorporeal membrane oxygenation (ECMO) medical retrieval in New South Wales, Australia. We describe the logistics involved in ECMO road and rotary-wing retrieval by a multidisciplinary team during the H1N1 influenza epidemic in winter 2009 (i.e., June 1 to August 31, 2009). Basic patient demographics and key retrieval time lines were analyzed. There were 17 patients retrieved on ECMO, with their ages ranging from 22 to 55 years. The median weight was 110 kg. Four critical events were recorded during retrieval, with no adverse outcomes. The retrieval distance varied from 20.8 to 430 km. There were delays in times from retrieval booking to both retrieval tasking and retrieval team departure in 88% of retrievals. The most common reasons cited were "patient not ready" 23.5% (4/17); "vehicle not available," 23.5% (4/17); and "complex retrieval," 41.2% (7/17). The median time (hours:minutes) from booking with the medical retrieval unit (MRU) to tasking was 4:35 (interquartile range [IQR] 3:27-6:15). The median time lag from tasking to departure was 1:00 (IQR 00:10-2:20). The median stabilization time was 1:30 (IQR 1:20-1:55). The median retrieval duration was 7:35 (IQR 5:50-10:15). The process of development of ECMO retrieval was enabled by the preexistence of a high-volume experienced medical retrieval service. Although ECMO retrieval is not a new concept, we describe an entire process for ECMO retrieval that we believe will benefit other retrieval service providers. The increased workload of ECMO retrieval during the swine flu pandemic has led to refinement in the system and process for the future.

  7. Science information systems: Archive, access, and retrieval

    NASA Technical Reports Server (NTRS)

    Campbell, William J.

    1991-01-01

    The objective of this research is to develop technology for the automated characterization and interactive retrieval and visualization of very large, complex scientific data sets. Technologies will be developed for the following specific areas: (1) rapidly archiving data sets; (2) automatically characterizing and labeling data in near real-time; (3) providing users with the ability to browse contents of databases efficiently and effectively; (4) providing users with the ability to access and retrieve system independent data sets electronically; and (5) automatically alerting scientists to anomalies detected in data.

  8. Science information systems: Archive, access, and retrieval

    NASA Technical Reports Server (NTRS)

    Campbell, William J.

    1991-01-01

    The objective of this research is to develop technology for the automated characterization and interactive retrieval and visualization of very large, complex scientific data sets. Technologies will be developed for the following specific areas: (1) rapidly archiving data sets; (2) automatically characterizing and labeling data in near real-time; (3) providing users with the ability to browse contents of databases efficiently and effectively; (4) providing users with the ability to access and retrieve system independent data sets electronically; and (5) automatically alerting scientists to anomalies detected in data.

  9. Optimal Aerosol Parameterization for Remote Sensing Retrievals

    NASA Technical Reports Server (NTRS)

    Newchurch, Michael J.

    2004-01-01

    We have developed a new algorithm for the retrieval of aerosol and gases from SAGE It1 solar transmission measurements. This algorithm improves upon the NASA operational algorithm in several key aspects, including solving the problem non-linearly and incorporating a new methodology for separating the contribution of aerosols and gases. In order to extract aerosol information we have built a huge database of aerosol models for both stratospheric and tropospheric aerosols, and polar stratospheric cloud particles. This set of models allows us to calculate a vast range of possible extinction spectra for aerosols. and from these, derive a set of eigenvectors which then provide the basis set used in our inversion algorithm. Our aerosol algorithm and retrievals are described in several articles (listed in References Section) published under this grant. In particular they allow us to analyze the spectral properties of aerosols and PSCs and ultimately derive their microphysical properties. We have found some considerable differences between our spectra and the ones derived from the SAGE III operational algorithm. These are interesting as they provide an independent check on the validity of published aerosol data and, in particular, on their associated uncertainties. In order to understand these differences, we are assembling independent aerosol data from other sources with which to make comparisons. We have carried out extensive comparisons of our ozone retrievals with both SAGE III and independent lidar, ozonesonde, and satellite measurements (Polyakov et al., 2004). These show very good agreement throughout the stratosphere and help to quantify differences which can be attributed to natural variation in ozone versus that produced by algorithmic differences. In the mid - upper stratosphere, agreement with independent data was generally within 5 - 20%. but in the lower stratosphere the differences were considerably larger. We believe that a large proportion of this

  10. [Brain Mechanism for Successful Memory Retrieval].

    PubMed

    Takeda, Masaki

    2016-04-01

    Previous neuropsychological studies that investigated patients with brain injury have revealed the presense of multiple memory systems and the related brain regions. Recent functional imaging studies have identified a neuronal network including the temporal cortex and hippocampus that is responsible for the retrieval of semantic memory. This memory network was further investigated by electrophysiology using a simultaneous recording technique. This new technique revealed that a coupling of inter-area top-down signal within the temporal cortex with translaminar signal processing is required for successful memory retrieval of visual objects.

  11. Competitive retrieval is not a prerequisite for forgetting in the retrieval practice paradigm.

    PubMed

    Camp, Gino; Dalm, Sander

    2016-09-01

    Retrieving information from memory can lead to forgetting of other, related information. The inhibition account of this retrieval-induced forgetting effect predicts that this form of forgetting occurs when competition arises between the practiced information and the related information, leading to inhibition of the related information. In the standard retrieval practice paradigm, a retrieval practice task is used in which participants retrieve the items based on a category-plus-stem cue (e.g., FRUIT-or___). In the current experiment, participants instead generated the target based on a cue in which the first 2 letters of the target were transposed (e.g., FRUIT-roange). This noncompetitive task also induced forgetting of unpracticed items from practiced categories. This finding is inconsistent with the inhibition account, which asserts that the forgetting effect depends on competitive retrieval. We argue that interference-based accounts of forgetting and the context-based account of retrieval-induced forgetting can account for this result. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

  12. A comparison of Boolean-based retrieval to the WAIS system for retrieval of aeronautical information

    NASA Technical Reports Server (NTRS)

    Marchionini, Gary; Barlow, Diane

    1994-01-01

    An evaluation of an information retrieval system using a Boolean-based retrieval engine and inverted file architecture and WAIS, which uses a vector-based engine, was conducted. Four research questions in aeronautical engineering were used to retrieve sets of citations from the NASA Aerospace Database which was mounted on a WAIS server and available through Dialog File 108 which served as the Boolean-based system (BBS). High recall and high precision searches were done in the BBS and terse and verbose queries were used in the WAIS condition. Precision values for the WAIS searches were consistently above the precision values for high recall BBS searches and consistently below the precision values for high precision BBS searches. Terse WAIS queries gave somewhat better precision performance than verbose WAIS queries. In every case, a small number of relevant documents retrieved by one system were not retrieved by the other, indicating the incomplete nature of the results from either retrieval system. Relevant documents in the WAIS searches were found to be randomly distributed in the retrieved sets rather than distributed by ranks. Advantages and limitations of both types of systems are discussed.

  13. Forgetting as a consequence of retrieval: a meta-analytic review of retrieval-induced forgetting.

    PubMed

    Murayama, Kou; Miyatsu, Toshiya; Buchli, Dorothy; Storm, Benjamin C

    2014-09-01

    Retrieving a subset of items can cause the forgetting of other items, a phenomenon referred to as retrieval-induced forgetting. According to some theorists, retrieval-induced forgetting is the consequence of an inhibitory mechanism that acts to reduce the accessibility of nontarget items that interfere with the retrieval of target items. Other theorists argue that inhibition is unnecessary to account for retrieval-induced forgetting, contending instead that the phenomenon can be best explained by noninhibitory mechanisms, such as strength-based competition or blocking. The current article provides the first major meta-analysis of retrieval-induced forgetting, conducted with the primary purpose of quantitatively evaluating the multitude of findings that have been used to contrast these 2 theoretical viewpoints. The results largely supported inhibition accounts but also provided some challenging evidence, with the nature of the results often varying as a function of how retrieval-induced forgetting was assessed. Implications for further research and theory development are discussed.

  14. Long-Term Health Effects of Neutering Dogs: Comparison of Labrador Retrievers with Golden Retrievers

    PubMed Central

    Hart, Benjamin L.; Hart, Lynette A.; Thigpen, Abigail P.; Willits, Neil H.

    2014-01-01

    Our recent study on the effects of neutering (including spaying) in Golden Retrievers in markedly increasing the incidence of two joint disorders and three cancers prompted this study and a comparison of Golden and Labrador Retrievers. Veterinary hospital records were examined over a 13-year period for the effects of neutering during specified age ranges: before 6 mo., and during 6–11 mo., year 1 or years 2 through 8. The joint disorders examined were hip dysplasia, cranial cruciate ligament tear and elbow dysplasia. The cancers examined were lymphosarcoma, hemangiosarcoma, mast cell tumor, and mammary cancer. The results for the Golden Retriever were similar to the previous study, but there were notable differences between breeds. In Labrador Retrievers, where about 5 percent of gonadally intact males and females had one or more joint disorders, neutering at <6 mo. doubled the incidence of one or more joint disorders in both sexes. In male and female Golden Retrievers, with the same 5 percent rate of joint disorders in intact dogs, neutering at <6 mo. increased the incidence of a joint disorder to 4–5 times that of intact dogs. The incidence of one or more cancers in female Labrador Retrievers increased slightly above the 3 percent level of intact females with neutering. In contrast, in female Golden Retrievers, with the same 3 percent rate of one or more cancers in intact females, neutering at all periods through 8 years of age increased the rate of at least one of the cancers by 3–4 times. In male Golden and Labrador Retrievers neutering had relatively minor effects in increasing the occurrence of cancers. Comparisons of cancers in the two breeds suggest that the occurrence of cancers in female Golden Retrievers is a reflection of particular vulnerability to gonadal hormone removal. PMID:25020045

  15. FRESCO+: an improved O2 A-band cloud retrieval algorithm for tropospheric trace gas retrievals

    NASA Astrophysics Data System (ADS)

    Wang, P.; Stammes, P.; van der A, R.; Pinardi, G.; van Roozendael, M.

    2008-11-01

    The FRESCO (Fast Retrieval Scheme for Clouds from the Oxygen A-band) algorithm has been used to retrieve cloud information from measurements of the O2 A-band around 760 nm by GOME, SCIAMACHY and GOME-2. The cloud parameters retrieved by FRESCO are the effective cloud fraction and cloud pressure, which are used for cloud correction in the retrieval of trace gases like O3 and NO2. To improve the cloud pressure retrieval for partly cloudy scenes, single Rayleigh scattering has been included in an improved version of the algorithm, called FRESCO+. We compared FRESCO+ and FRESCO effective cloud fractions and cloud pressures using simulated spectra and one month of GOME measured spectra. As expected, FRESCO+ gives more reliable cloud pressures over partly cloudy pixels. Simulations and comparisons with ground-based radar/lidar measurements of clouds show that the FRESCO+ cloud pressure is about the optical midlevel of the cloud. Globally averaged, the FRESCO+ cloud pressure is about 50 hPa higher than the FRESCO cloud pressure, while the FRESCO+ effective cloud fraction is about 0.01 larger. The effect of FRESCO+ cloud parameters on O3 and NO2 vertical column density (VCD) retrievals is studied using SCIAMACHY data and ground-based DOAS measurements. We find that the FRESCO+ algorithm has a significant effect on tropospheric NO2 retrievals but a minor effect on total O3 retrievals. The retrieved SCIAMACHY tropospheric NO2 VCDs using FRESCO+ cloud parameters (v1.1) are lower than the tropospheric NO2VCDs which used FRESCO cloud parameters (v1.04), in particular over heavily polluted areas with low clouds. The difference between SCIAMACHY tropospheric NO2 VCDs v1.1 and ground-based MAXDOAS measurements performed in Cabauw, The Netherlands, during the DANDELIONS campaign is about -2.12×1014molec cm-2.

  16. Fernald Silo Remote Retrieval Tool Development

    SciTech Connect

    Varma, V.K.

    2004-05-18

    A long-reach tool was developed to remove discrete objects from the silos at the Fernald Environmental Management Project in Ohio. If they are not removed, these objects can potentially cause problems during the retrieval and transfer of waste from the silos. Most of the objects are on top of the Bentogrout cap inside the silos at or near the primary opening into the tank and will therefore require only vertical lifting. The objects are located about 20 ft from the top of the silo. Although most of the objects can be retrieved from 20 ft, the long-reach tool was designed to for a reach up to 40 ft in case objects roll towards the walls of the tank or need to be removed during heel retrieval operations. This report provides a detailed description of the tool that was developed, tested, and demonstrated at the Tanks Technology Cold Test Facility at Oak Ridge National Laboratory. Scaffolding was erected over two experimental cells to simulate the 40-ft maximum working depth anticipated in the silos at Fernald. Plastic bottles and plastic sheeting simulated the debris that could be encountered during waste retrieval operations.

  17. Body Posture Facilitates Retrieval of Autobiographical Memories

    ERIC Educational Resources Information Center

    Dijkstra, Katinka; Kaschak, Michael P.; Zwaan, Rolf A.

    2007-01-01

    We assessed potential facilitation of congruent body posture on access to and retention of autobiographical memories in younger and older adults. Response times were shorter when body positions during prompted retrieval of autobiographical events were similar to the body positions in the original events than when body position was incongruent.…

  18. Retrievals with the Infrared Atmospheric Sounding Interferometer

    NASA Technical Reports Server (NTRS)

    Zhou, Daniel K.; Liu, Xu; Larar, Allen M.; Smith, William L.; Taylor, Jonathan P.; Schlussel, Peter; Strow, L. Larrabee; Calbet, Xavier; Mango, Stephen A.

    2007-01-01

    The Infrared Atmospheric Sounding Interferometer (IASI) on the MetOp satellite was launched on October 19, 2006. The Joint Airborne IASI Validation Experiment (JAIVEx) was conducted during April 2007 mainly for validation of the IASI on the MetOp satellite. IASI possesses an ultra-spectral resolution of 0.25/cm and a spectral coverage from 645 to 2760/cm. Ultraspectral resolution infrared spectral radiance obtained from near nadir observations provide atmospheric, surface, and cloud property information. An advanced retrieval algorithm with a fast radiative transfer model, including cloud effects, is used for atmospheric profile and cloud parameter retrieval. Preliminary retrievals of atmospheric soundings, surface properties, and cloud optical/microphysical properties with the IASI observations during the JAIVEx are obtained and presented. These retrievals are further inter-compared with those obtained from airborne FTS system, such as the NPOESS Airborne Sounder Testbed Interferometer (NAST-I), dedicated dropsondes, radiosondes, and ground based Raman Lidar. The capabilities of satellite ultra-spectral sounder such as the IASI are investigated.

  19. Models for Retrieval with Probabilistic Indexing.

    ERIC Educational Resources Information Center

    Fuhr, Norbert

    1989-01-01

    Describes three models for probabilistic indexing, all based on the Darmstadt automatic indexing approach, and presents experimental evaluation results for each. The discussion covers the improved retrieval effectiveness of probabilistic indexing over binary indexing, and suggestions for using this automatic indexing method with free text terms.…

  20. A Context Vector Model for Information Retrieval.

    ERIC Educational Resources Information Center

    Billhardt, Holger; Borrajo, Daniel; Maojo, Victor

    2002-01-01

    Presents an indexing and information retrieval method that, based on the vector space model, incorporates term dependencies and thus obtains semantically richer representations of documents. Highlights include term context vectors; techniques for estimating the dependencies among terms; term weights; experimental results on four text collections;…

  1. Introduction to Data Transmission for Information Retrieval

    ERIC Educational Resources Information Center

    Kallenbach, P. A.

    1975-01-01

    An introduction is presented to data transmission technology and networks for information retrieval purposes. Data signals are analyzed, modulation techniques are discussed, communication procedures between terminals and the central processing unit are surveyed, and possible network configurations are considered. (Author/PF)

  2. Memory Retrieval in Mice and Men.

    PubMed

    Ben-Yakov, Aya; Dudai, Yadin; Mayford, Mark R

    2015-10-05

    Retrieval, the use of learned information, was until recently mostly terra incognita in the neurobiology of memory, owing to shortage of research methods with the spatiotemporal resolution required to identify and dissect fast reactivation or reconstruction of complex memories in the mammalian brain. The development of novel paradigms, model systems, and new tools in molecular genetics, electrophysiology, optogenetics, in situ microscopy, and functional imaging, have contributed markedly in recent years to our ability to investigate brain mechanisms of retrieval. We review selected developments in the study of explicit retrieval in the rodent and human brain. The picture that emerges is that retrieval involves coordinated fast interplay of sparse and distributed corticohippocampal and neocortical networks that may permit permutational binding of representational elements to yield specific representations. These representations are driven largely by the activity patterns shaped during encoding, but are malleable, subject to the influence of time and interaction of the existing memory with novel information. Copyright © 2015 Cold Spring Harbor Laboratory Press; all rights reserved.

  3. Medical Image Retrieval: A Multimodal Approach

    PubMed Central

    Cao, Yu; Steffey, Shawn; He, Jianbiao; Xiao, Degui; Tao, Cui; Chen, Ping; Müller, Henning

    2014-01-01

    Medical imaging is becoming a vital component of war on cancer. Tremendous amounts of medical image data are captured and recorded in a digital format during cancer care and cancer research. Facing such an unprecedented volume of image data with heterogeneous image modalities, it is necessary to develop effective and efficient content-based medical image retrieval systems for cancer clinical practice and research. While substantial progress has been made in different areas of content-based image retrieval (CBIR) research, direct applications of existing CBIR techniques to the medical images produced unsatisfactory results, because of the unique characteristics of medical images. In this paper, we develop a new multimodal medical image retrieval approach based on the recent advances in the statistical graphic model and deep learning. Specifically, we first investigate a new extended probabilistic Latent Semantic Analysis model to integrate the visual and textual information from medical images to bridge the semantic gap. We then develop a new deep Boltzmann machine-based multimodal learning model to learn the joint density model from multimodal information in order to derive the missing modality. Experimental results with large volume of real-world medical images have shown that our new approach is a promising solution for the next-generation medical imaging indexing and retrieval system. PMID:26309389

  4. Natural language information retrieval in digital libraries

    SciTech Connect

    Strzalkowski, T.; Perez-Carballo, J.; Marinescu, M.

    1996-12-31

    In this paper we report on some recent developments in joint NYU and GE natural language information retrieval system. The main characteristic of this system is the use of advanced natural language processing to enhance the effectiveness of term-based document retrieval. The system is designed around a traditional statistical backbone consisting of the indexer module, which builds inverted index files from pre-processed documents, and a retrieval engine which searches and ranks the documents in response to user queries. Natural language processing is used to (1) preprocess the documents in order to extract content-carrying terms, (2) discover inter-term dependencies and build a conceptual hierarchy specific to the database domain, and (3) process user`s natural language requests into effective search queries. This system has been used in NIST-sponsored Text Retrieval Conferences (TREC), where we worked with approximately 3.3 GBytes of text articles including material from the Wall Street Journal, the Associated Press newswire, the Federal Register, Ziff Communications`s Computer Library, Department of Energy abstracts, U.S. Patents and the San Jose Mercury News, totaling more than 500 million words of English. The system have been designed to facilitate its scalability to deal with ever increasing amounts of data. In particular, a randomized index-splitting mechanism has been installed which allows the system to create a number of smaller indexes that can be independently and efficiently searched.

  5. Strategies for Building Distributed Information Retrieval Systems.

    ERIC Educational Resources Information Center

    Macleod, Ian A.; And Others

    1987-01-01

    Discussion of the need for distributed information retrieval systems focuses on a model system, Fulcrum FUL/Text. Differences from distributed database management systems are described; system design is discussed; implementation requirements are explained including remote operation calls (ROC's); and a prototype simulation model based on FUL/Text…

  6. Identify, Organize, and Retrieve Items Using Zotero

    ERIC Educational Resources Information Center

    Clark, Brian; Stierman, John

    2009-01-01

    Librarians build collections. To do this they use tools that help them identify, organize, and retrieve items for the collection. Zotero (zoh-TAIR-oh) is such a tool that helps the user build a library of useful books, articles, web sites, blogs, etc., discovered while surfing online. A visit to Zotero's homepage, www.zotero.org, shows a number of…

  7. Retrieving Information from a Hierarchical Plan

    ERIC Educational Resources Information Center

    Schneider, Darryl W.; Logan, Gordon D.

    2007-01-01

    Plans give structure to behavior by specifying whether and when different tasks must be performed. However, the structure of behavior need not mirror the structure of the plan. To investigate this idea, the authors studied how plan information is retrieved in the context of a novel sequence-position cuing procedure, wherein subjects memorize two…

  8. Online Literature Retrieval: An Alternative Strategy.

    ERIC Educational Resources Information Center

    Piotrowski, Chris; Perdue, Robert

    This study investigated the efficacy of utilizing comprehensive database search strategies in performing an online literature search in the subject area of psychology, with special interest in the performance of the database PsycInfo. The DIALOG Information Retrieval Service's DIALINDEX subject category options were used as the major search…

  9. BELTracker: evidence sentence retrieval for BEL statements

    PubMed Central

    Rastegar-Mojarad, Majid; Komandur Elayavilli, Ravikumar; Liu, Hongfang

    2016-01-01

    Biological expression language (BEL) is one of the main formal representation models of biological networks. The primary source of information for curating biological networks in BEL representation has been literature. It remains a challenge to identify relevant articles and the corresponding evidence statements for curating and validating BEL statements. In this paper, we describe BELTracker, a tool used to retrieve and rank evidence sentences from PubMed abstracts and full-text articles for a given BEL statement (per the 2015 task requirements of BioCreative V BEL Task). The system is comprised of three main components, (i) translation of a given BEL statement to an information retrieval (IR) query, (ii) retrieval of relevant PubMed citations and (iii) finding and ranking the evidence sentences in those citations. BELTracker uses a combination of multiple approaches based on traditional IR, machine learning, and heuristics to accomplish the task. The system identified and ranked at least one fully relevant evidence sentence in the top 10 retrieved sentences for 72 out of 97 BEL statements in the test set. BELTracker achieved a precision of 0.392, 0.532 and 0.615 when evaluated with three criteria, namely full, relaxed and context criteria, respectively, by the task organizers. Our team at Mayo Clinic was the only participant in this task. BELTracker is available as a RESTful API and is available for public use. Database URL: http://www.openbionlp.org:8080/BelTracker/finder/Given_BEL_Statement PMID:27173525

  10. Gastroesophageal intussusception in a Labrador retriever.

    PubMed Central

    Graham, K L; Buss, M S; Dhein, C R; Barbee, D D; Seitz, S E

    1998-01-01

    A 14-month-old, intact male Labrador retriever was referred for evaluation of vomiting and regurgitation. A diagnosis of gastroesophageal intussusception with aspiration pneumonia was made. The patient responded favorably to aggressive surgical and medical management. The guarded to poor prognosis for gastroesophageal intussusception makes the successful outcome of this case unique. Images Figure 1. Figure 2. PMID:9818138

  11. Millennial Students' Mental Models of Information Retrieval

    ERIC Educational Resources Information Center

    Holman, Lucy

    2009-01-01

    This qualitative study examines first-year college students' online search habits in order to identify patterns in millennials' mental models of information retrieval. The study employed a combination of modified contextual inquiry and concept mapping methodologies to elicit students' mental models. The researcher confirmed previously observed…

  12. Robust keyword retrieval method for OCRed text

    NASA Astrophysics Data System (ADS)

    Fujii, Yusaku; Takebe, Hiroaki; Tanaka, Hiroshi; Hotta, Yoshinobu

    2011-01-01

    Document management systems have become important because of the growing popularity of electronic filing of documents and scanning of books, magazines, manuals, etc., through a scanner or a digital camera, for storage or reading on a PC or an electronic book. Text information acquired by optical character recognition (OCR) is usually added to the electronic documents for document retrieval. Since texts generated by OCR generally include character recognition errors, robust retrieval methods have been introduced to overcome this problem. In this paper, we propose a retrieval method that is robust against both character segmentation and recognition errors. In the proposed method, the insertion of noise characters and dropping of characters in the keyword retrieval enables robustness against character segmentation errors, and character substitution in the keyword of the recognition candidate for each character in OCR or any other character enables robustness against character recognition errors. The recall rate of the proposed method was 15% higher than that of the conventional method. However, the precision rate was 64% lower.

  13. The JPL Library information retrieval system

    NASA Technical Reports Server (NTRS)

    Walsh, J.

    1975-01-01

    The development, capabilities, and products of the computer-based retrieval system of the Jet Propulsion Laboratory Library are described. The system handles books and documents, produces a book catalog, and provides a machine search capability. Programs and documentation are available to the public through NASA's computer software dissemination program.

  14. Neural Network Model of Memory Retrieval

    PubMed Central

    Recanatesi, Stefano; Katkov, Mikhail; Romani, Sandro; Tsodyks, Misha

    2015-01-01

    Human memory can store large amount of information. Nevertheless, recalling is often a challenging task. In a classical free recall paradigm, where participants are asked to repeat a briefly presented list of words, people make mistakes for lists as short as 5 words. We present a model for memory retrieval based on a Hopfield neural network where transition between items are determined by similarities in their long-term memory representations. Meanfield analysis of the model reveals stable states of the network corresponding (1) to single memory representations and (2) intersection between memory representations. We show that oscillating feedback inhibition in the presence of noise induces transitions between these states triggering the retrieval of different memories. The network dynamics qualitatively predicts the distribution of time intervals required to recall new memory items observed in experiments. It shows that items having larger number of neurons in their representation are statistically easier to recall and reveals possible bottlenecks in our ability of retrieving memories. Overall, we propose a neural network model of information retrieval broadly compatible with experimental observations and is consistent with our recent graphical model (Romani et al., 2013). PMID:26732491

  15. Telerobotic excavation system for unexploded ordnance retrieval

    SciTech Connect

    Burks, B.L.; Killough, S.M.; Thompson, D.H.; Rossi, R.A.

    1994-12-31

    The small emplacement excavator (SEE) is a ruggedized military vehicle with backhoe and front loader used by the US Army for unexploded ordnance (UXO) retrieval and general utility excavation activities. In order to evaluate the feasibility of removing personnel from the vehicle during high-risk excavation tasks a development and demonstration project was initiated to evaluate performance capabilities of the SEE under telerobotic control. A technology demonstration of the TSEE was conducted at McKinley Range, Redstone Arsenal, Huntsville, Alabama on 13--17 September, 1993. The primary objective of the demonstration was to evaluate and demonstrate the feasibility of remote UXO retrieval. During the demonstration, explosive ordnance disposal specialists were instructed on telerobotic operation of the TSEE, and then were asked to complete a simulated UXO retrieval task. Participants then submitted an evaluation of the system including human factors performance data. This presentation will describe the TSEE, retrieval demonstration, and summarize results of the performance evaluations. Some examples of the results are given below. Seventy percent of the demonstration participants found the tasks were as easy or easier to accomplish utilizing the remote system than with an unmodified system. Similarly, eighty percent of the participants found the TSEE hand controller was as easy or easier to use than the normal manual controls.

  16. Encoding and Retrieval During Bimanual Rhythmic Coordination

    ERIC Educational Resources Information Center

    Shockley, Kevin; Turvey, Michael T.

    2005-01-01

    In 2 experiments, bimanual 1:1 rhythmic coordination was performed concurrently with encoding or retrieval of word lists. Effects of divided attention (DA) on coordination were indexed by changes in mean relative phase and recurrence measures of shared activity between the 2 limbs. Effects of DA on memory were indexed by deficits in recall…

  17. Information Retrieval as a Network Application.

    ERIC Educational Resources Information Center

    Lynch, Clifford A.

    1990-01-01

    Describes the function of the Open Systems Interconnection (OSI) Z39.50 protocol, which allows for construction of information "servers"--i.e., resources attached to a computer communications network that can be accessed by client machines to retrieve information. The relationship of Z39.5 to other OSI protocols is explained. (23…

  18. Retrieval-Induced Forgetting of Arithmetic Facts

    ERIC Educational Resources Information Center

    Campbell, Jamie I. D.; Thompson, Valerie A.

    2012-01-01

    Retrieval-induced forgetting (RIF) is a widely studied phenomenon of human memory, but RIF of arithmetic facts remains relatively unexplored. In 2 experiments, we investigated RIF of simple addition facts (2 + 3 = 5) from practice of their multiplication counterparts (2 x 3 = 6). In both experiments, robust RIF expressed in response times occurred…

  19. Towards Intelligent Data Retrieval in Multimedia Databases

    DTIC Science & Technology

    1991-02-01

    for Best-Match Retrieval," ACM TOIS, Vol. 8, No. 2, April 1990 [SMEA81] Smeaton , A.F. and C.J. Van Rijsbergen, "The nearest neighbor problem in...Alexandria, VA 22302-0268 1 copy Director of Research Administration, Code 08, Naval Postgraduate School, Monterey, CA 93943 1 copy John Maynard Code

  20. Learning with Retrieval-Based Concept Mapping

    ERIC Educational Resources Information Center

    Blunt, Janell R.; Karpicke, Jeffrey D.

    2014-01-01

    Students typically create concept maps while they view the material they are trying to learn. In these circumstances, concept mapping serves as an elaborative study activity--students are not required to retrieve the material they are learning. In 2 experiments, we examined the effectiveness of concept mapping when it is used as a retrieval…