Ectoparasitic flies (Diptera, Streblidae) of bats (Chiroptera, Phyllostomidae) in an Atlantic Forest area, southeastern Brazil.

PubMed

França, D S; Pereira, S N; Maas, A C S; Martins, M A; Bolzan, D P; Lima, I P; Dias, D; Peracchi, A L

2013-11-01

We studied infestation rates and parasite-host associations between streblid flies and phyllostomid bats in an Atlantic Forest area of Rio de Janeiro state, southeastern Brazil. We captured 301 individuals from seven Phyllostomidae bat species. Out of that total, 69 bats had been parasitised by nine Streblidae species; the most frequent species were Trichobius joblingi and Trichobius tiptoni. The species Paraeuctenodes longipes, associated with Anoura geoffroyi, was the most frequent species. The highest mean intensity was observed for Paraeuctenodes longipes, associated with A. geoffroyi, and Paratrichobius longicrus associated with Artibeus lituratus, both ectoparasite species with a mean intensity of five individuals per bat. Trichobius joblingi exhibited the highest mean abundance, which was over three on its host species. Streblid richness in the study area was similar to the richness found in other studies carried out in the Atlantic Forest. We observed that streblid richness in this biome depends more on inherent characteristics of each physiognomy and on the host-species than on the sampling effort.

Inhibition of human P450 enzymes by natural extracts used in traditional medicine.

PubMed

Rodeiro, Idania; Donato, María T; Jimenez, Nuria; Garrido, Gabino; Molina-Torres, Jorge; Menendez, Roberto; Castell, José V; Gómez-Lechón, María J

2009-02-01

Different medicinal plants are widely used in Cuba and Mexico to treat several disorders. This paper reports in vitro inhibitory effects on the P450 system of herbal products commonly used by people in Cuba and Mexico in traditional medicine for decades. Experiments were conducted in human liver microsomes. The catalytic activities of CYP1A1/2, 2D6, and 3A4 were measured using specific probe substrates. The Heliopsis longipes extract exhibited a concentration-dependent inhibition of the three enzymes, and similar effects were produced by affinin (an alkamide isolated from the H. longipes extract) and two catalytically reduced alkamides. Mangifera indica L. and Thalassia testudinum extracts, two natural polyphenol-rich extracts, diminished CYP1A1/2 and 3A4 activities, but not the CYP2D6 activity. These results suggest that these herbs inhibit the major human P450 enzymes involved in drug metabolism and could induce potential herbal-drug interactions. Copyright (c) 2008 John Wiley & Sons, Ltd.

Efficient Reduction of Antibacterial Activity and Cytotoxicity of Fluoroquinolones by Fungal-Mediated N-Oxidation.

PubMed

Rusch, Marina; Spielmeyer, Astrid; Meißner, Jessica; Kietzmann, Manfred; Zorn, Holger; Hamscher, Gerd

2017-04-19

Extensive usage of fluoroquinolone antibiotics in livestock results in their occurrence in manure and subsequently in the environment. Fluoroquinolone residues may promote bacterial resistance and are toxic to plants and aquatic organisms. Moreover, fluoroquinolones may enter the food chain through plant uptake, if manure is applied as fertilizer. Thus, the presence of fluoroquinolones in the environment may pose a threat to human and ecological health. In this study, the biotransformation of enrofloxacin, marbofloxacin, and difloxacin by the fungus X. longipes (Xylaria) was investigated. The main metabolites were unequivocally identified as the respective N-oxides by mass spectrometry and nuclear magnetic resonance spectroscopy. Fungal-mediated N-oxidation of fluoroquinolones led to a 77-90% reduction of the initial antibacterial activity. In contrast to their respective parent compounds, N-oxides showed low cytotoxic potential and had a reduced impact on cell proliferation. Thus, biotransformation by X. longipes may represent an effective method for inactivating fluoroquinolones.

A new species of scincid lizard in the genus Oligosoma (Reptilia: Scincidae) from the mid-Canterbury high country, New Zealand.

PubMed

Whitaker, Tony; Chapple, David G; Hitchmough, Rodney A; Lettink, Marieke; Patterson, Geoff B

2018-01-31

New Zealand has a diverse, endemic skink fauna, which is recognised as the most species rich skink assemblage of any cool temperate region on earth. All native New Zealand skink species are assigned to a single genus, Oligosoma Girard. A new species of Oligosoma is described from screes in montane tussock grassland in the mid-Canterbury high country, New Zealand, where it is currently known from four sites on two mountain ranges. The new species (Oligosoma hoparatea sp. nov.) can be distinguished from all congeners by a combination of mid-body scale row and lamellae counts, scale morphologies, and a bold striped pattern with smooth-edged, dark lateral bands. It is part of the O. longipes Patterson species complex, and occurs in sympatry with its closest relative, O. aff. longipes 'southern'. The species is currently highly threatened, and is listed as Nationally Critical in New Zealand. Predation by a suite of introduced mammals is assumed to be a major threat to its survival.

Sensitivity and response time of three common Antarctic marine copepods to metal exposure.

PubMed

Zamora, Lara Marcus; King, Catherine K; Payne, Sarah J; Virtue, Patti

2015-02-01

Understanding the sensitivity of Antarctic marine organisms to metals is essential in order to manage environmental contamination risks. To date toxicity studies conducted on Antarctic marine species are limited. This study is the first to examine the acute effects of copper and cadmium on three common coastal Antarctic copepods: the calanoids Paralabidocera antarctica and Stephos longipes, and the cyclopoid Oncaea curvata. These copepods responded slowly to metal exposure (4-7d) emphasising that the exposure period of 48-96 h commonly used in toxicity tests with temperate and tropical species is not appropriate for polar organisms. We found that a longer 7 d exposure period was the minimum duration appropriate for Antarctic copepods. Although sensitivity to metal exposure varied between species, copper was more toxic than cadmium in all three species. P.antarctica was the most sensitive with 7d LC50 values for copper and cadmium of 20 μg L(-1) and 237 μg L(-1) respectively. Sensitivities to copper were similar for both O. curvata (LC50=64 μg L(-1)) and S. longipes (LC50=56 μg L(-1)), while O. curvata was more sensitive to cadmium (LC50=901 μg L(-1)) than S. longipes (LC50=1250 μg L(-1)). In comparison to copepods from lower latitudes, Antarctic copepods were more sensitive to copper and of similar sensitivity or less sensitive to cadmium. This study highlights the need for longer exposure periods in toxicity tests with slow responding Antarctic biota in order to generate relevant sensitivity data for inclusion in site-specific environmental quality guidelines for Antarctica. Copyright © 2014 Elsevier Ltd. All rights reserved.

Identification and Characterization of an Antifungal Protein, AfAFPR9, Produced by Marine-Derived Aspergillus fumigatus R9.

PubMed

Rao, Qi; Guo, Wenbin; Chen, Xinhua

2015-05-01

A fungal strain, R9, was isolated from the South Atlantic sediment sample and identified as Aspergillus fumigatus. An antifungal protein, AfAFPR9, was purified from the culture supernatant of Aspergillus fumigatus R9. AfAFPR9 was identified to be restrictocin, which is a member of the ribosome-inactivating proteins (RIPs), by MALDI-TOF-TOF-MS. AfAFPR9 displayed antifungal activity against plant pathogenic Fusarium oxysporum, Alternaria longipes, Colletotrichum gloeosporioides, Paecilomyces variotii, and Trichoderma viride at minimum inhibitory concentrations of 0.6, 0.6, 1.2, 1.2, and 2.4 μg/disc, respectively. Moreover, AfAFPR9 exhibited a certain extent of thermostability, and metal ion and denaturant tolerance. The iodoacetamide assay showed that the disulfide bridge in AfAFPR9 was indispensable for its antifungal action. The cDNA encoding for AfAFPR9 was cloned from A. fumigatus R9 by RTPCR and heterologously expressed in E. coli. The recombinant AfAFPR9 protein exhibited obvious antifungal activity against C. gloeosporioides, T. viride, and A. longipes. These results reveal the antifungal properties of a RIP member (AfAFPR9) from marine-derived Aspergillus fumigatus and indicated its potential application in controlling plant pathogenic fungi.

Spider mite web mediates anti-predator behaviour

PubMed Central

Lemos, Felipe; Sarmento, Renato Almeida; Pallini, Angelo; Dias, Cleide Rosa; Sabelis, Maurice W.

2010-01-01

Herbivores suffer significant mortality from predation and are therefore subject to natural selection on traits promoting predator avoidance and resistance. They can employ an array of strategies to reduce predation, for example through changes in behaviour, morphology and life history. So far, the anti-predator response studied most intensively in spider mites has been the avoidance of patches with high predation risk. Less attention has been given to the dense web produced by spider mites, which is a complex structure of silken threads that is thought to hinder predators. Here, we investigate the effects of the web produced by the red spider mite, Tetranychus evansi Baker & Pritchard, on its interactions with the predatory mite, Phytoseiulus longipes Evans. We tested whether female spider mites recognize predator cues and whether these can induce the spider mites to produce denser web. We found that the prey did not produce denser web in response to such cues, but laid more eggs suspended in the web, away from the leaf surface. These suspended eggs suffered less from predation by P. longipes than eggs that were laid on the leaf surface under the web. Thus, by altering their oviposition behaviour in response to predator cues, females of T. evansi protect their offspring. PMID:20191311

Spatially and temporally resolved measurements of a dense copper plasma heated by intense relativistic electrons

NASA Astrophysics Data System (ADS)

Coleman, J. E.; Colgan, J.

2017-08-01

A 100-μm-thick Cu foil is isochorically heated by a ˜100-ns-long electron bunch with an energy of 19.8 MeV and current of 1.7 kA to Te > 1 eV. After 100 ns of heating and 20 ns of expansion, the plasma exhibits a stable, quiescent temperature and density distribution for >200 ns. Several intense Cu-I emission lines are observed after ˜20 J of electron beam energy is deposited. These lines have well known Stark widths providing a direct measurement of ne. The Los Alamos ATOMIC code [Magee et al., AIP Conf. Proc. 2004, 168-179 and Hakel et al., J. Quant. Spectrosc. Radiat. Transfer 99, 265 (2006)] was run in local-thermodynamic-equilibrium mode to estimate Te and ne. Spatially and temporally resolved measurements are presented in both the vertical and horizontal directions adjacent to the foil indicating temperatures >1 eV and densities ranging from 1-3 × 1017 cm-3 after expansion and cooling.

Demersal fish distribution and habitat use within and near Baltimore and Norfolk Canyons, U.S. Middle Atlantic Slope

USGS Publications Warehouse

Ross, Steve W.; Rhode, Mike; Quattrini, Andrea M.

2015-01-01

Numerous submarine canyons along the United States middle Atlantic continental margin support enhanced productivity, diverse and unique habitats, active fisheries, and are vulnerable to various anthropogenic disturbances. During two cruises (15 Aug–2 Oct 2012 and 30 Apr–27 May 2013), Baltimore and Norfolk canyons and nearby areas (including two cold seeps) were intensively surveyed to determine demersal fish distributions and habitat associations. Overall, 34 ROV dives (234–1612 m) resulted in 295 h of bottom video observations and numerous collections. These data were supplemented by 40, 30-min bottom trawl samples. Fish observations were assigned to five general habitat designations: 1) sand-mud (flat), 2) sloping sand-mud with burrows, 3) low profile gravel, rock, boulder, 4) high profile, canyon walls, rocks or ridges, and 5) seep-mixed hard and soft substrata, the later subdivided into seven habitats based on amounts of dead mussel and rock cover. The influence of corals, sponges and live mussels (seeps only) on fish distributions was also investigated. Both canyon areas supported abundant and diverse fish communities and exhibited a wide range of habitats, including extensive areas of deep-sea corals and sponges and two nearby methane seeps (380–430 m, 1455–1610 m). All methods combined yielded a total of 123 species of fishes, 12 of which are either new records for this region or have new range data. Depth was a major factor that separated the fish faunas into two zones with a boundary around 1400 m. Fishes defining the deeper zone included Lycodes sp.,Dicrolene introniger, Gaidropsaurus ensis, Hydrolagus affinis, Antimora rostrata, andAldrovandia sp. Fishes in the deep zone did not exhibit strong habitat affinities, despite the presence of a quite rugged, extensive methane seep. We propose that habitat specificity decreases with increasing depth. Fishes in the shallower zone, characterized by Laemonema sp., Phycis chesteri, Nezumia bairdii, Brosme

New furanones from the plant endophytic fungus Pestalotiopsis besseyi.

PubMed

Liu, Haitao; Liu, Shuchun; Guo, Liangdong; Zhang, Yonggang; Cui, Langjun; Ding, Gang

2012-11-27

Pestalafuranones A-E (compounds 1-5), five new 2(5H)-furanones, have been isolated from cultures of an isolate of Pestalotiopsis besseyi. The structures of these compounds were elucidated mainly by analysis of their NMR spectroscopic data and HRESIMS experiments. Pestalafuranones A-C (compounds 1-3) displayed weak inhibitory effects against HIV-1 replication in C8166 cells, whereas pestalafuranones D (4) and E (5) showed moderate antifungal activity against the plant pathogens Verticillium dahiae and Alternaria longipes.

Application of biomimetics principles in space optics

NASA Astrophysics Data System (ADS)

Remisova, K.; Hudec, R.

2017-09-01

The principles of biomimetics have been successfully applied in space optics, e.g. in Lobster-Eye X-ray optical systems. However, the recent increase in knowledge on vision of sea animals, especially on mirror eyes of scallops, crustaceans, and deep sea fishes, makes possible to consider other such applications. Especially the discoveries of mirror eyes of the deep sea fishes Dolichopteryx longipes and Rhynchohyalus natalensis are promising because of their unique arrangements and likely active optics.

Use of otolith for detecting strontium-90 in fish from the harbor of Fukushima Dai-ichi Nuclear Power Plant.

PubMed

Fujimoto, Ken; Miki, Shizuho; Kaeriyama, Hideki; Shigenobu, Yuya; Takagi, Kaori; Ambe, Daisuke; Ono, Tsuneo; Watanabe, Tomowo; Morinaga, Kenji; Nakata, Kaoru; Morita, Takami

2015-06-16

To clarify the level of contamination with radioactive cesium (radiocesium) discharged from Fukushima Dai-ichi Nuclear Power Plant (FDNPP), three fish species caught in the main harbor of FDNPP were subjected to γ-ray analysis. The concentration of radiocesium in muscle differed among individual fish, even those of similar size of the same species, and showed little relation to the standard length of fish. The maximum concentration of radiocesium (202 kBq/kg wet) was detected from fat greenling samples. A comparison to data from outside the port indicated that the level of radiocesium contamination inside the port was higher than that outside. We found that β-rays were emitted from otoliths of fishes caught in the port of FDNPP. β-ray intensities were correlated with the concentrations of radiocesium in muscles of the three fish species. In Japanese rockfish, the β-ray count rates from otoliths were significantly correlated with the concentration of radiocesium and (90)Sr in the whole body without internal organs of Japanese rockfish. However, no β-rays were detected from brown hakeling samples collected around FDNPP, suggesting that the detection of β-rays from otoliths may indicate living in the main harbor of FDNPP.

The South Asian millipede genus Chondromorpha Silvestri, 1897 (Diplopoda, Polydesmida, Paradoxosomatidae, Sulciferini): redescriptions and synonymies.

PubMed

Sankaran, Pradeep M; Sebastian, Pothalil A

2017-11-16

The South Asian millipede genus Chondromorpha Silvestri, 1897 is diagnosed and its relationship with Parchondromorpha Jeekel, 1980 is established. The species C. atopus (Chamberlin, 1920) and C. indus (Chamberlin, 1920), as well as the subspecies C. kelaarti kelaarti (Humbert, 1865), C. kelaarti longipes (Verhoeff, 1936) and C. kelaarti valparaiensis (Carl, 1932) are recognised as junior synonyms of C. kelaarti (Humbert, 1865), thereby reducing the total number of Chondromorpha spp. in India to four: C. kaimura Turk, 1947, C. kelaarti, C. mammifera Attems, 1936 and C. severini Silvestri, 1897 (the type-species). Two species, C. kelaarti and C. mammifera, are redescribed and illustrated in detail. All four Indian Chondromorpha spp. are keyed, and the known distribution records of C. kelaarti and C. mammifera are mapped.

An equation of state for partially ionized plasmas: The Coulomb contribution to the free energy

NASA Astrophysics Data System (ADS)

Kilcrease, D. P.; Colgan, J.; Hakel, P.; Fontes, C. J.; Sherrill, M. E.

2015-09-01

We have previously developed an equation of state (EOS) model called ChemEOS (Hakel and Kilcrease, Atomic Processes in Plasmas, Eds., J. Cohen et al., AIP, 2004) for a plasma of interacting ions, atoms and electrons. It is based on a chemical picture of the plasma and is derived from an expression for the Helmholtz free energy of the interacting species. All other equilibrium thermodynamic quantities are then obtained by minimizing this free energy subject to constraints, thus leading to a thermodynamically consistent EOS. The contribution to this free energy from the Coulomb interactions among the particles is treated using the method of Chabrier and Potekhin (Phys. Rev. E 58, 4941 (1998)) which we have adapted for partially ionized plasmas. This treatment is further examined and is found to give rise to unphysical behavior for various elements at certain values of the density and temperature where the Coulomb coupling begins to become significant and the atoms are partially ionized. We examine the source of this unphysical behavior and suggest corrections that produce acceptable results. The sensitivity of the thermodynamic properties and frequency-dependent opacity of iron is examined with and without these corrections. The corrected EOS is used to determine the fractional ion populations and level populations for a new generation of OPLIB low-Z opacity tables currently being prepared at Los Alamos National Laboratory with the ATOMIC code.

Response of amphipod assemblages to desalination brine discharge: Impact and recovery

NASA Astrophysics Data System (ADS)

de-la-Ossa-Carretero, J. A.; Del-Pilar-Ruso, Y.; Loya-Fernández, A.; Ferrero-Vicente, L. M.; Marco-Méndez, C.; Martinez-Garcia, E.; Sánchez-Lizaso, J. L.

2016-04-01

Desalination has become an important industry whose dense, high-salinity effluent has an impact on marine communities. Without adequate dilution, brine remains on the bottom increasing bottom salinity and affecting benthic communities. Amphipods showed high sensitivity to increased salinity produced by desalination brine discharge. A decrease in abundance and diversity of amphipods was detected at the station closest to the outfall, where salinity values reached 53. This salinity was later reduced by including a diffuser at the end of the pipeline. Six months after diffuser installation, amphipod abundance increased. During the first stage of this recovery, species such as Photis longipes recovered their abundance, others such as Microdeutopus versiculatus displayed opportunistic patterns, while others needed more time for recovery, e.g. Harpinia pectinata. These differences may be dependent on the organism living habits.

New data on the longhorn beetles of Mongolia with particular emphasis on the genus Eodorcadion Breuning, 1947 (Coleoptera, Cerambycidae)

PubMed Central

Karpiński, Lech; Szczepański, Wojciech T.; Boldgiv, Bazartseren; Walczak, Marcin

2018-01-01

Abstract New data on the distribution, biology, and ecology of the longhorn beetles occurring in Mongolia are presented together with a list of 35 species that were collected during a one-month entomological expedition in August 2015. New localities of some rare taxa endemic to Mongolia, such as Eodorcadion dorcas dorcas (Jakovlev, 1901), E. humerale impluviatum (Faldermann, 1833), and E. intermedium intermedium (Jakovlev, 1889) are given. High-quality photographs of several rather unique species, i.e., Pachytodes longipes (Gebler, 1832), Eodorcadion maurum australe Danilevsky, 2014, E. oryx (Jakovlev, 1895), Monochamus impluviatus impluviatus (Motschulsky, 1859), and M. sutor longulus (Pic, 1898) along with images of their habitats or feeding grounds are also presented. Furthermore, the ecological role of the fireweed Chamaenerion angustifolium (L.) Scop. in the case of boreal anthophilous cerambycid species is highlighted for the first time. PMID:29674884

An equation of state for partially ionized plasmas: The Coulomb contribution to the free energy

DOE PAGES

Kilcrease, D. P.; Colgan, J.; Hakel, P.; ...

2015-06-20

We have previously developed an equation of state (EOS) model called ChemEOS (Hakel and Kilcrease, Atomic Processes in Plasmas, Eds., J. Cohen et al., AIP, 2004) for a plasma of interacting ions, atoms and electrons. It is based on a chemical picture of the plasma and is derived from an expression for the Helmholtz free energy of the interacting species. All other equilibrium thermodynamic quantities are then obtained by minimizing this free energy subject to constraints, thus leading to a thermodynamically consistent EOS. The contribution to this free energy from the Coulomb interactions among the particles is treated using themore » method of Chabrier and Potekhin (Phys. Rev. E 58, 4941 (1998)) which we have adapted for partially ionized plasmas. This treatment is further examined and is found to give rise to unphysical behavior for various elements at certain values of the density and temperature where the Coulomb coupling begins to become significant and the atoms are partially ionized. We examine the source of this unphysical behavior and suggest corrections that produce acceptable results. The sensitivity of the thermodynamic properties and frequency-dependent opacity of iron is examined with and without these corrections. Lastly, the corrected EOS is used to determine the fractional ion populations and level populations for a new generation of OPLIB low-Z opacity tables currently being prepared at Los Alamos National Laboratory with the ATOMIC code.« less

Extensive Acclimation in Ectotherms Conceals Interspecific Variation in Thermal Tolerance Limits

PubMed Central

Pintor, Anna F. V.; Schwarzkopf, Lin; Krockenberger, Andrew K.

2016-01-01

Species’ tolerance limits determine their capacity to tolerate climatic extremes and limit their potential distributions. Interspecific variation in thermal tolerances is often proposed to indicate climatic vulnerability and is, therefore, the subject of many recent meta-studies on differential capacities of species from climatically different habitats to deal with climate change. Most studies on thermal tolerances do not acclimate animals or use inconsistent, and insufficient, acclimation times, limiting our knowledge of the shape, duration and extent of acclimation responses. Consequently patterns in thermal tolerances observed in meta-analyses, based on data from the literature are based on inconsistent, partial acclimation and true trends may be obscured. In this study we describe time-course of complete acclimation of critical thermal minima in the tropical ectotherm Carlia longipes and compare it to the average acclimation response of other reptiles, estimated from published data, to assess how much acclimation time may contribute to observed differences in thermal limits. Carlia longipes decreased their lower critical thermal limits by 2.4°C and completed 95% of acclimation in 17 weeks. Wild populations did not mirror this acclimation process over the winter. Other reptiles appear to decrease cold tolerance more quickly (95% in 7 weeks) and to a greater extent, with an estimated average acclimation response of 6.1°C. However, without data on tolerances after longer acclimation times available, our capacity to estimate final acclimation state is very limited. Based on the subset of data available for meta-analysis, much of the variation in cold tolerance observed in the literature can be attributed to acclimation time. Our results indicate that (i) acclimation responses can be slow and substantial, even in tropical species, and (ii) interspecific differences in acclimation speed and extent may obscure trends assessed in some meta-studies. Cold tolerances

Extensive Acclimation in Ectotherms Conceals Interspecific Variation in Thermal Tolerance Limits.

PubMed

Pintor, Anna F V; Schwarzkopf, Lin; Krockenberger, Andrew K

2016-01-01

Species' tolerance limits determine their capacity to tolerate climatic extremes and limit their potential distributions. Interspecific variation in thermal tolerances is often proposed to indicate climatic vulnerability and is, therefore, the subject of many recent meta-studies on differential capacities of species from climatically different habitats to deal with climate change. Most studies on thermal tolerances do not acclimate animals or use inconsistent, and insufficient, acclimation times, limiting our knowledge of the shape, duration and extent of acclimation responses. Consequently patterns in thermal tolerances observed in meta-analyses, based on data from the literature are based on inconsistent, partial acclimation and true trends may be obscured. In this study we describe time-course of complete acclimation of critical thermal minima in the tropical ectotherm Carlia longipes and compare it to the average acclimation response of other reptiles, estimated from published data, to assess how much acclimation time may contribute to observed differences in thermal limits. Carlia longipes decreased their lower critical thermal limits by 2.4°C and completed 95% of acclimation in 17 weeks. Wild populations did not mirror this acclimation process over the winter. Other reptiles appear to decrease cold tolerance more quickly (95% in 7 weeks) and to a greater extent, with an estimated average acclimation response of 6.1°C. However, without data on tolerances after longer acclimation times available, our capacity to estimate final acclimation state is very limited. Based on the subset of data available for meta-analysis, much of the variation in cold tolerance observed in the literature can be attributed to acclimation time. Our results indicate that (i) acclimation responses can be slow and substantial, even in tropical species, and (ii) interspecific differences in acclimation speed and extent may obscure trends assessed in some meta-studies. Cold tolerances of

Nutritional value of spiny lobsters (Panulirus sp.) from Southern Coast of Java

NASA Astrophysics Data System (ADS)

Haryono, F. Eko Dwi; Hutabarat, Sahala; Hutabarat, Johannes; Ambariyanto

2015-12-01

Five species of spiny lobsters are known to live in southern coast of Java. These lobsters are very popular seafood which was believed to have high nutritional value. However, nutrition content of these species from the area has not been investigated. This research was conducted to study nutrition content in these crustaceans. Five spiny lobsters i.e. Panulirus homarus, P. versicolor, P. ornatus, P. penicullatus, and P. longipes, were collected randomly from different locations at the southern coast of Java. Morphometric measurements were conducted prior to proximate analysis of these lobsters. All species of spiny lobsters investigated have similar carapace length. However, P. homarus and P. versicolor have the highest muscle weight. Proximate analysis shows that P. homarus also has high protein (24.18%) and carbohydrate content (55.68%) and lowest lipid content (6.18%) compare with other species. These results suggest that this lobster has best nutritional value for consumption.

Application of biomimetics in x-ray optics

NASA Astrophysics Data System (ADS)

Hudec, R.; Remisova, K.

2017-05-01

The principles of biomimetics were successfully applied in X ray optics in the past and recently, e.g. in Lobster-Eye optical systems. However, the recent growing knowledge of sea vision, especially of peculiar mirror eyes of scallops, crustaceans, and deep sea fishes, makes it possible to consider other such applications. One of the most important discoveries is finding of mirror eyes in deep sea fish Dolichopteryx longipes based on large large numbers of very small mirror plates organized in specific positions. This arrangement may even include principles of active optics. We report on ongoing study with focus on understanding of very specific mirror eyes of sea animals and how they may help us to design and develop special optics for scientific applications. We study the ways these mirror eyes work, what are the advantages of these peculiar eye arrangements, and whether these optics can be used in advanced devices, e. g. X-ray optics. We will briefly present and discuss the preliminary results.

Memory for Multiple Cache Locations and Prey Quantities in a Food-Hoarding Songbird

PubMed Central

Armstrong, Nicola; Garland, Alexis; Burns, K. C.

2012-01-01

Most animals can discriminate between pairs of numbers that are each less than four without training. However, North Island robins (Petroica longipes), a food-hoarding songbird endemic to New Zealand, can discriminate between quantities of items as high as eight without training. Here we investigate whether robins are capable of other complex quantity discrimination tasks. We test whether their ability to discriminate between small quantities declines with (1) the number of cache sites containing prey rewards and (2) the length of time separating cache creation and retrieval (retention interval). Results showed that subjects generally performed above-chance expectations. They were equally able to discriminate between different combinations of prey quantities that were hidden from view in 2, 3, and 4 cache sites from between 1, 10, and 60 s. Overall results indicate that North Island robins can process complex quantity information involving more than two discrete quantities of items for up to 1 min long retention intervals without training. PMID:23293622

Memory for multiple cache locations and prey quantities in a food-hoarding songbird.

PubMed

Armstrong, Nicola; Garland, Alexis; Burns, K C

2012-01-01

Most animals can discriminate between pairs of numbers that are each less than four without training. However, North Island robins (Petroica longipes), a food-hoarding songbird endemic to New Zealand, can discriminate between quantities of items as high as eight without training. Here we investigate whether robins are capable of other complex quantity discrimination tasks. We test whether their ability to discriminate between small quantities declines with (1) the number of cache sites containing prey rewards and (2) the length of time separating cache creation and retrieval (retention interval). Results showed that subjects generally performed above-chance expectations. They were equally able to discriminate between different combinations of prey quantities that were hidden from view in 2, 3, and 4 cache sites from between 1, 10, and 60 s. Overall results indicate that North Island robins can process complex quantity information involving more than two discrete quantities of items for up to 1 min long retention intervals without training.

Diversity and altitudinal distribution of phlebotomine sand flies (Diptera: Psychodidae) in visceral leishmaniasis endemic areas of northwest Ethiopia.

PubMed

Yared, Solomon; Gebresilassie, Araya; Akililu, Essayas; Deribe, Kebede; Balkew, Meshesha; Warburg, Alon; Hailu, Asrat; Gebre-Michael, Teshome

2017-12-01

The Leishmaniases are caused by the protozoan parasites of the genus Leishmania and are transmitted to humans by the bite of infected female phlebotomine sand flies. Both visceral and cutaneous leishmaniases are widely distributed in different parts of Ethiopia. The aim of this study was to determine the diversity and altitudinal distribution of phlebotomine sand flies from Kafta Humera to Gondar town in northwest Ethiopia. Seven localities were selected with distinct altitudinal variations between 550m above sea level (m a.s.l) and 2300m a.s.l. In each locality, sand flies were collected using standard CDC light traps and sticky traps during the active sand fly season from December 2012 to May 2013. Shannon-Weiner species diversity index and Jaccard's coefficient were used to estimate species diversity and similarity between altitudes and localities, respectively. A total of 89,044 sand flies (41,798 males and 47, 246 females) were collected from the seven localities/towns throughout the study period. Twenty-two species belonging to 11 species in the genus Phlebotomus and 11 species in the genus Sergentomyia were documented. Of these, Sergentomyia clydei (25.87%), S. schwetzi (25.21%), S. africana (24.65%), S. bedfordi (8.89%), Phlebotomus orientalis (6.43%), and S. antennata (4.8%) were the most prevalent species. The remaining 10 Phlebotomus species and six Sergentomyia were less frequent catches. In CDC light trap and sticky trap, higher species diversity and richness for both male and female sand flies was observed at low altitude ranging from 550 to 699m a.s.l in Adebay village in Kafta Humera district whereas low species richness and high evenness of both sexes were also observed in an altitude 1950-2300m a.s.l. The results revealed that the presence of leishmaniasis vectors such as P. orientalis, P. longipes, P. papatasi, and P. duboscqi in different altitudes in northwest Ethiopia. P. orientalis a vector of L. donovani, occurred between altitude 500-1100m

Observation of Interspecies Ion Separation in Inertial-Confinement-Fusion Implosions via Imaging X-ray spectroscopy

NASA Astrophysics Data System (ADS)

Joshi, Tirtha Raj

2016-10-01

Interspecies ion separation has been proposed as a yield-degradation mechanism in inertial-confinement-fusion (ICF) experiments. We present direct experimental evidence of interspecies ion separation in direct-drive ICF experiments performed at the OMEGA laser facility. These experiments were designed based on the fact that interspecies ion thermo-diffusion would be strongest for species with large mass and charge difference. The targets were spherical plastic shells filled with D2 and Ar (1% by atom). Ar K-shell spectral features were observed primarily between the time of first-shock convergence and slightly before neutron bang time, using a time- and space-integrated spectrometer, streaked crystal spectrometer, and two gated multi-monochromatic X-ray imagers fielded along quasi-orthogonal lines-of-sight. Detailed spectroscopic analyses of spatially resolved Ar K-shell lines reveal deviation from the initial 1%-Ar gas fill and show both Ar-concentration enhancement and depletion at different times and radial positions of the implosion. The experimental results are interpreted with radiation-hydrodynamic simulations that include recently implemented, first-principles models of interspecies ion diffusion. The experimentally inferred Ar-atom-fraction profiles agree gently with calculated profiles associated with the incoming and rebounding first shock. This work was done in collaboration with P. Hakel, S. C. Hsu, E. L. Vold, M. J. Schmitt, N. M. Hoffman, R. M. Rauenzahn, G. Kagan, X.-Z. Tang, Y. Kim, and H. W. Herrmann of LANL, and R. C. Mancini of UNR. LA-UR-16-24804. Supported by the LANL ICF and ASC Programs under US-DoE contract no. DE-AC52-06NA25396.

Characterization and Pathogenicity of Alternaria burnsii from Seeds of Cucurbita maxima (Cucurbitaceae) in Bangladesh.

PubMed

Paul, Narayan Chandra; Deng, Jian Xin; Lee, Hyang Burm; Yu, Seung-Hun

2015-12-01

In the course of survey of endophytic fungi from Bangladesh pumpkin seeds in 2011~2012, two strains (CNU111042 and CNU111043) with similar colony characteristics were isolated and characterized by their morphology and by molecular phylogenetic analysis of the internal transcribed spacer, glyceraldehydes-3-phosphate dehydrogenase (gpd), and Alternaria allergen a1 (Alt a1) sequences. Phylogenetic analysis of all three sequences and their combined dataset revealed that the fungus formed a subclade within the A. alternata clade, matching A. burnsi and showing differences with its other closely related Alternaria species, such as A. longipes, A. tomato, and A. tomaticola. Long ellipsoid, obclavate or ovoid beakless conidia, shorter and thinner conidial size (16~60 [90] × 6.5~14 [~16] µm) distinguish this fungus from other related species. These isolates showed more transverse septation (2~11) and less longitudinal septation (0~3) than did other related species. Moreover, the isolate did not produce any diffusible pigment on media. Therefore, our results reveal that the newly recorded fungus from a new host, Cucurbita maxima, is Alternaria burnsii Uppal, Patel & Kamat.

Evolution of Antifreeze Protein Genes in the Diatom Genus Fragilariopsis: Evidence for Horizontal Gene Transfer, Gene Duplication and Episodic Diversifying Selection

PubMed Central

Sorhannus, Ulf

2011-01-01

Hypotheses about horizontal transfer of antifreeze protein genes to ice-living diatoms were addressed using two different statistical methods available in the program Prunier. The role of diversifying selection in driving the differentiation of a set of antifreeze protein genes in the diatom genus Fragilariopsis was also investigated. Four horizontal gene transfer events were identified. Two of these took place between two major eukaryote lineages, that is from the diatom Chaetoceros neogracile to the copepod Stephos longipes and from a basidiomycete clade to a monophyletic group, consisting of the diatom species Fragilariopsis curta and Fragilariopsis cylindrus. The remaining two events included transfers from an ascomycete lineage to the proteobacterium Stigmatella aurantiaca and from the proteobacterium Polaribacter irgensii to a group composed of 4 proteobacterium species. After the Fragilariopsis lineage acquired the antifreeze protein gene from the basidiomycetes, it duplicated and went through episodic evolution, characterized by strong positive selection acting on short segments of the branches in the tree. This selection pattern suggests that the paralogs differentiated functionally over relatively short time periods. Taken together, the results obtained here indicate that the group of antifreeze protein genes considered here have a complex evolutionary history. PMID:22253534

Characterization of AgMaT2, a Plasma Membrane Mannitol Transporter from Celery, Expressed in Phloem Cells, Including Phloem Parenchyma Cells[OA

PubMed Central

Juchaux-Cachau, Marjorie; Landouar-Arsivaud, Lucie; Pichaut, Jean-Philippe; Campion, Claire; Porcheron, Benoit; Jeauffre, Julien; Noiraud-Romy, Nathalie; Simoneau, Philippe; Maurousset, Laurence; Lemoine, Rémi

2007-01-01

A second mannitol transporter, AgMaT2, was identified in celery (Apium graveolens L. var. dulce), a species that synthesizes and transports mannitol. This transporter was successfully expressed in two different heterologous expression systems: baker's yeast (Saccharomyces cerevisiae) cells and tobacco (Nicotiana tabacum) plants (a non-mannitol-producing species). Data indicated that AgMaT2 works as an H+/mannitol cotransporter with a weak selectivity toward other polyol molecules. When expressed in tobacco, AgMaT2 decreased the sensitivity to the mannitol-secreting pathogenic fungi Alternaria longipes, suggesting a role for polyol transporters in defense mechanisms. In celery, in situ hybridization showed that AgMaT2 was expressed in the phloem of leaflets, petioles from young and mature leaves, floral stems, and roots. In the phloem of petioles and leaflets, AgMaT2, as localized with specific antibodies, was present in the plasma membrane of three ontologically related cell types: sieve elements, companion cells, and phloem parenchyma cells. These new data are discussed in relation to the physiological role of AgMaT2 in regulating mannitol fluxes in celery petioles. PMID:17631523

Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus

PubMed Central

Roy, Lise; Dowling, Ashley P.G.; Chauve, Claude Marie; Buronfosse, Thierry

2010-01-01

Molecular markers for cladistic analyses may perform differently according to the taxonomic group considered and the historical level under investigation. Here we evaluate the phylogenetic potential of five different markers for resolving evolutionary relationships within the ectoparasitic genus Dermanyssus at the species level, and their ability to address questions about the evolution of specialization. COI provided 9–18% divergence between species (up to 9% within species), 16S rRNA 10–16% (up to 4% within species), ITS1 and 2 2–9% (up to 1% within species) and Tropomyosin intron n 8–20% (up to 6% within species). EF-1α revealed different non-orthologous copies within individuals of Dermanyssus and Ornithonyssus. Tropomyosin intron n was shown containing consistent phylogenetic signal at the specific level within Dermanyssus and represents a promising marker for future prospects in phylogenetics of Acari. Phylogenetic analyses revealed that the generalist condition is apomorphic and D. gallinae might represent a complex of hybridized lineages. The split into hirsutus-group and gallinae-group in Dermanyssus does not seem to be appropriate based upon these results and D. longipes appears to be composed of two different entities. PMID:20480038

Extinctions, genetic erosion and conservation options for the black rhinoceros (Diceros bicornis)

PubMed Central

Moodley, Yoshan; Russo, Isa-Rita M.; Dalton, Desiré L.; Kotzé, Antoinette; Muya, Shadrack; Haubensak, Patricia; Bálint, Boglárka; Munimanda, Gopi K.; Deimel, Caroline; Setzer, Andrea; Dicks, Kara; Herzig-Straschil, Barbara; Kalthoff, Daniela C.; Siegismund, Hans R.; Robovský, Jan; O’Donoghue, Paul; Bruford, Michael W.

2017-01-01

The black rhinoceros is again on the verge of extinction due to unsustainable poaching in its native range. Despite a wide historic distribution, the black rhinoceros was traditionally thought of as depauperate in genetic variation, and with very little known about its evolutionary history. This knowledge gap has hampered conservation efforts because hunting has dramatically reduced the species’ once continuous distribution, leaving five surviving gene pools of unknown genetic affinity. Here we examined the range-wide genetic structure of historic and modern populations using the largest and most geographically representative sample of black rhinoceroses ever assembled. Using both mitochondrial and nuclear datasets, we described a staggering loss of 69% of the species’ mitochondrial genetic variation, including the most ancestral lineages that are now absent from modern populations. Genetically unique populations in countries such as Nigeria, Cameroon, Chad, Eritrea, Ethiopia, Somalia, Mozambique, Malawi and Angola no longer exist. We found that the historic range of the West African subspecies (D. b. longipes), declared extinct in 2011, extends into southern Kenya, where a handful of individuals survive in the Masai Mara. We also identify conservation units that will help maintain evolutionary potential. Our results suggest a complete re-evaluation of current conservation management paradigms for the black rhinoceros. PMID:28176810

Comparative anatomy of floral elaiophores in Vitekorchis Romowicz & Szlach., Cyrtochilum Kunth and a florally dimorphic species of Oncidium Sw. (Orchidaceae: Oncidiinae)

PubMed Central

Davies, Kevin L.; Stpiczyńska, Małgorzata; Rawski, Michał

2014-01-01

Background and Aims Recently, molecular approaches have been used to investigate the phylogeny of subtribe Oncidiinae, resulting in the re-alignment of several of its genera. Here, a description is given of the structure of the floral elaiophores (oil glands) of four species formerly assigned to Oncidium Sw. Those of Vitekorchis excavata (Lindl.) Romowicz & Szlach., Cyrtochilum meirax (Rchb.f.) Dalström and a species of Oncidium displaying floral dimorphism, namely O. heteranthum Poepp. & Endl. var. album, are compared with that of Gomesa longipes (Lindl.) M.W. Chase & N.H. Williams, whose epithelial elaiophores are typical of many Oncidiinae, in order to extend our understanding of elaiophore diversity within this subtribe. Methods Floral elaiophore structure was examined and compared at anthesis for all four species using light microscopy, scanning electron microscopy, transmission electron microscopy and histochemistry. Key Results In all species investigated, with the exception of C. meirax, the floral elaiophore occurs on the labellar callus and is of the intermediate type, possessing both glabrous and trichomatous regions. By contrast, although all four species produce lipid secretions, C. meirax lacks an obvious elaiophore. In each case, the secretory tissue is represented by a single-layered epidermis of cuboidal cells (trichomatous and/or atrichomatous). Palisade cells are absent. The secretion may be wax- or oil-like and is usually produced by smooth endoplasmic reticulum (SER). However, in C. meirax, where rough endoplasmic reticulum (RER) predominates, oil accumulates as plastoglobuli within elaioplasts. These plastoglobuli are then discharged into the cytoplasm, forming oil bodies. In some species, oil usually accumulates within vesicles at the plasmalemma or in the periplasmic space before traversing the cell wall and accumulating beneath the cuticle, sometimes with distension of the latter. Gomesa longipes is unusual in its production of a

Antipredator behaviours of a spider mite in response to cues of dangerous and harmless predators.

PubMed

Dias, Cleide Rosa; Bernardo, Ana Maria Guimarães; Mencalha, Jussara; Freitas, Caelum Woods Carvalho; Sarmento, Renato Almeida; Pallini, Angelo; Janssen, Arne

2016-07-01

Prey are known to invest in costly antipredator behaviour when perceiving cues of dangerous, but not of relatively harmless predators. Whereas most studies investigate one type of antipredator behaviour, we studied several types (changes in oviposition, in escape and avoidance behaviour) in the spider mite Tetranychus evansi in response to cues from two predatory mites. The predator Phytoseiulus longipes is considered a dangerous predator for T. evansi, whereas Phytoseiulus macropilis has a low predation rate on this prey, thus is a much less dangerous predator. Spider mite females oviposited less on leaf disc halves with predator cues than on clean disc halves, independent of the predator species. On entire leaf discs, they laid fewer eggs in the presence of cues of the dangerous predator than on clean discs, but not in the presence of cues of the harmless predator. Furthermore, the spider mites escaped more often from discs with cues of the dangerous predator than from discs without predator cues, but they did not escape more from discs with cues of the harmless predator. The spider mites did not avoid plants with conspecifics and predators. We conclude that the spider mites displayed several different antipredator responses to the same predator species, and that some of these antipredator responses were stronger with cues of dangerous predators than with cues of harmless predators.

Induced plant-defenses suppress herbivore reproduction but also constrain predation of their offspring.

PubMed

Ataide, Livia M S; Pappas, Maria L; Schimmel, Bernardus C J; Lopez-Orenes, Antonio; Alba, Juan M; Duarte, Marcus V A; Pallini, Angelo; Schuurink, Robert C; Kant, Merijn R

2016-11-01

Inducible anti-herbivore defenses in plants are predominantly regulated by jasmonic acid (JA). On tomato plants, most genotypes of the herbivorous generalist spider mite Tetranychus urticae induce JA defenses and perform poorly on it, whereas the Solanaceae specialist Tetranychus evansi, who suppresses JA defenses, performs well on it. We asked to which extent these spider mites and the predatory mite Phytoseiulus longipes preying on these spider mites eggs are affected by induced JA-defenses. By artificially inducing the JA-response of the tomato JA-biosynthesis mutant def-1 using exogenous JA and isoleucine (Ile), we first established the relationship between endogenous JA-Ile-levels and the reproductive performance of spider mites. For both mite species we observed that they produced more eggs when levels of JA-Ile were low. Subsequently, we allowed predatory mites to prey on spider mite-eggs derived from wild-type tomato plants, def-1 and JA-Ile-treated def-1 and observed that they preferred, and consumed more, eggs produced on tomato plants with weak JA defenses. However, predatory mite oviposition was similar across treatments. Our results show that induced JA-responses negatively affect spider mite performance, but positively affect the survival of their offspring by constraining egg-predation. Copyright © 2016 The Authors. Published by Elsevier Ireland Ltd.. All rights reserved.

Identification of Uvaria sp by barcoding coupled with high-resolution melting analysis (Bar-HRM).

PubMed

Osathanunkul, M; Madesis, P; Ounjai, S; Pumiputavon, K; Somboonchai, R; Lithanatudom, P; Chaowasku, T; Wipasa, J; Suwannapoom, C

2016-01-13

DNA barcoding, which was developed about a decade ago, relies on short, standardized regions of the genome to identify plant and animal species. This method can be used to not only identify known species but also to discover novel ones. Numerous sequences are stored in online databases worldwide. One of the ways to save cost and time (by omitting the sequencing step) in species identification is to use available barcode data to design optimized primers for further analysis, such as high-resolution melting analysis (HRM). This study aimed to determine the effectiveness of the hybrid method Bar-HRM (DNA barcoding combined with HRM) to identify species that share similar external morphological features, rather than conduct traditional taxonomic identification that require major parts (leaf, flower, fruit) of the specimens. The specimens used for testing were those, which could not be identified at the species level and could either be Uvaria longipes or Uvaria wrayias, indicated by morphological identification. Primer pairs derived from chloroplast regions (matK, psbA-trnH, rbcL, and trnL) were used in the Bar-HRM. The results obtained from psbA-trnH primers were good enough to help in identifying the specimen while the rest were not. Bar-HRM analysis was proven to be a fast and cost-effective method for plant species identification.

Comparative anatomy of floral elaiophores in Vitekorchis Romowicz & Szlach., Cyrtochilum Kunth and a florally dimorphic species of Oncidium Sw. (Orchidaceae: Oncidiinae).

PubMed

Davies, Kevin L; Stpiczyńska, Małgorzata; Rawski, Michał

2014-06-01

Recently, molecular approaches have been used to investigate the phylogeny of subtribe Oncidiinae, resulting in the re-alignment of several of its genera. Here, a description is given of the structure of the floral elaiophores (oil glands) of four species formerly assigned to Oncidium Sw. Those of Vitekorchis excavata (Lindl.) Romowicz & Szlach., Cyrtochilum meirax (Rchb.f.) Dalström and a species of Oncidium displaying floral dimorphism, namely O. heteranthum Poepp. & Endl. var. album, are compared with that of Gomesa longipes (Lindl.) M.W. Chase & N.H. Williams, whose epithelial elaiophores are typical of many Oncidiinae, in order to extend our understanding of elaiophore diversity within this subtribe. Floral elaiophore structure was examined and compared at anthesis for all four species using light microscopy, scanning electron microscopy, transmission electron microscopy and histochemistry. In all species investigated, with the exception of C. meirax, the floral elaiophore occurs on the labellar callus and is of the intermediate type, possessing both glabrous and trichomatous regions. By contrast, although all four species produce lipid secretions, C. meirax lacks an obvious elaiophore. In each case, the secretory tissue is represented by a single-layered epidermis of cuboidal cells (trichomatous and/or atrichomatous). Palisade cells are absent. The secretion may be wax- or oil-like and is usually produced by smooth endoplasmic reticulum (SER). However, in C. meirax, where rough endoplasmic reticulum (RER) predominates, oil accumulates as plastoglobuli within elaioplasts. These plastoglobuli are then discharged into the cytoplasm, forming oil bodies. In some species, oil usually accumulates within vesicles at the plasmalemma or in the periplasmic space before traversing the cell wall and accumulating beneath the cuticle, sometimes with distension of the latter. Gomesa longipes is unusual in its production of a heterogeneous secretion, whereas Vitekorchis

Recent results from the first polar direct drive plastic capsule implosions on NIF

NASA Astrophysics Data System (ADS)

Schmitt, Mark J.

2012-10-01

Polar direct drive (PDD) offers a simplified platform for conducting strongly driven implosions on NIF to investigate mix, hydro-burn and ignition-relevant physics. Its successful use necessitates a firm understanding and predictive capability of its implosion characteristics including hydro performance, symmetry and yield. To assess this capability, the first two PDD implosions of deuterium filled CH capsules were recently conducted at NIF. The P2 Legendre mode symmetry seen in these implosions agreed with pre-shot predictions even though the 700kJ drive energy produced intensities that far exceeded thresholds for both Raman and Brillouin stimulated scattering. These shots were also the first to employ image backlighting driven by two laser quads. Preliminary results indicate that the yield from the uncoated 2.25 mm diameter, 42 μm thick, CH shells was reduced by about a factor of two owing to as-shot laser drive asymmetries. Similarly, a small (sim50 μm) centroid offset between the upper and lower shell hemispheres seen in the first shot appears to be indicative of the laser quad energies. Overall, the implosion trajectories agreed with pre-shot predictions of bangtime. The second shot incorporated an 80 ?m wide,10 ?m deep depression encircling the equator of the capsule. This engineered feature was imposed to test our capability to predict the effect of high-mode features on yield and mix. A predicted yield reduction factor of 3 was not observed.[4pt] In collaboration with P. A. Bradley, J. A. Cobble, P. Hakel, S. C. Hsu, N. S. Krasheninnikova, G. A. Kyrala, G. R. Magelssen, T. J. Murphy, K. A. Obrey, R. C. Shah, I. L. Tregillis and F. J. Wysocki of Los Alamos National Laboratory; M. Marinak, R. Wallace, T. Parham, M. Cowan, S. Glenn, R. Benedetti and the NIF Operations Team of Lawrence Livermore National Laboratory; R. S. Craxton and P. W. McKenty of the Univ. Rochester; P. Fitzsimmons and A. Nikroo of General Atomics; H. Rinderknecht, M. Rosenberg, and M. G

Small cysteine-rich antifungal proteins from radish: their role in host defense.

PubMed Central

Terras, F R; Eggermont, K; Kovaleva, V; Raikhel, N V; Osborn, R W; Kester, A; Rees, S B; Torrekens, S; Van Leuven, F; Vanderleyden, J

1995-01-01

Radish seeds have previously been shown to contain two homologous, 5-kD cysteine-rich proteins designated Raphanus sativus-antifungal protein 1 (Rs-AFP1) and Rs-AFP2, both of which exhibit potent antifungal activity in vitro. We now demonstrate that these proteins are located in the cell wall and occur predominantly in the outer cell layers lining different seed organs. Moreover, Rs-AFPs are preferentially released during seed germination after disruption of the seed coat. The amount of released proteins is sufficient to create a microenvironment around the seed in which fungal growth is suppressed. Both the cDNAs and the intron-containing genomic regions encoding the Rs-AFP preproteins were cloned. Transcripts (0.55 kb) hybridizing with an Rs-AFP1 cDNA-derived probe were present in near-mature and mature seeds. Such transcripts as well as the corresponding proteins were barely detectable in healthy uninfected leaves but accumulated systemically at high levels after localized fungal infection. The induced leaf proteins (designated Rs-AFP3 and Rs-AFP4) were purified and shown to be homologous to seed Rs-AFPs and to exert similar antifungal activity in vitro. A chimeric Rs-AFP2 gene under the control of the constitutive cauliflower mosaic virus 35S promoter conferred enhanced resistance to the foliar pathogen Alternaria longipes in transgenic tobacco. The term "plant defensins" is proposed to denote these defense-related proteins. PMID:7780308

The mitochondrial genome of the Japanese skeleton shrimp Caprella mutica (Amphipoda: Caprellidea) reveals a unique gene order and shared apomorphic translocations with Gammaridea.

PubMed

Kilpert, Fabian; Podsiadlowski, Lars

2010-06-01

This study presents the complete mitochondrial (mt) genome of the amphipod Caprella mutica, an east-Asian species, which recently invaded the coastal regions of North America, Europe, and New Zealand. It is the first complete sequence of a member of the amphipod subclade Caprellidea. The mt genome has a total length of 15,427 bp and is organized in a circular double-strand molecule. All 37 mt genes are present, including the common set of 22 tRNAs. Particularly noticeable is the duplication of the control region (CR). The additional CR is located between nad6 and cob, and is almost identical to the original one. The most extensive changes in the gene order affect nad5 and a block consisting of trnH, nad4, nad4L, and trnP-all inserted near the original CR. The gene nad5 is also inverted. Furthermore, a comparison with the pancrustacean ground pattern reveals additional changes of individual tRNA genes. Some of these changes are also shared by Metacrangonyx longipes and Parhyale hawaiensis. These arrangements were found only in amphipods and might be considered as apomorphic by character states of Amphipoda. In all the three species, there is good evidence that trnG originated from a rare duplication/remolding event of the adjacent trnW gene. Nevertheless, each of the three available amphipod mitogenome sequences also bears unique rearrangements. C. mutica, however, shows the most extensive rearrangement in comparison with the pancrustacean ground pattern.

PYCNOIB: Biodiversity and Biogeography of Iberian Pycnogonids

PubMed Central

Soler-Membrives, Anna; Munilla, Tomás

2015-01-01

Biodiversity and biogeographic studies comparing the distribution patterns of benthic marine organisms across the Iberian Atlantic and Mediterranean waters are scarce. The Pycnogonida (sea spiders) are a clear example of both endemicity and diversity, and are considered a key taxon to study and monitor biogeographic and biodiversity patterns. This is the first review that compiles data about abundance and diversity of Iberian pycnogonids and examines their biogeographic patterns and bathymetric constraints using GIS tools. A total of 17762 pycnogonid records from 343 localities were analyzed and were found to contain 65 species, 21 genera and 12 families. Achelia echinata and Ammothella longipes (family Acheliidae) were the most abundant comprising ~80% of the total records. The Acheliidae is also the most speciose in Iberian waters with 15 species. In contrast, the family Nymphonidae has 7 species but is significantly less abundant (<1% of the total records) than Acheliidae. Species accumulation curves indicate that further sampling would increase the number of Iberian species records. Current sampling effort suggests that the pycnogonid fauna of the Mediterranean region may be richer than that of the Atlantic. The Strait of Gibraltar and the Alboran Sea are recognized as species-rich areas that act as buffer zones between the Atlantic and Mediterranean boundaries. The deep waters surrounding the Iberian Peninsula are poorly surveyed, with only 15% of the sampling sites located below 1000 m. Further deep-water sampling is needed mainly on the Iberian Mediterranean side. PMID:25781483

Ceratomyxa gouletti n. sp. (Myxosporea: Ceratomyxidae), a parasite of the red scorpionfish Scorpaena scrofa (L.) from Tunisian waters.

PubMed

Garbouj, Myriam; Rangel, Luís F; Santos, Maria J; Bahri, Sihem

2018-06-01

Ceratomyxa gouletti n. sp. is a new parasite described from the gallbladder of the red scorpionfish Scorpaena scrofa (Scorpaeniformes: Scorpaenidae) collected from La Goulette in the Northeast of Tunisia. The parasite develops disporic plasmodia, elliptical to ovoid in shape, measuring up to 33.1 ± 3.6 (28.0-38.2) μm in length and 12.5 ± 2.1 (11.3-14.0) μm in width. Mature spores are elongated transversely and crescent-shaped with rounded ends and unequal shell valves, measuring 8.1 ± 1.27 (7.2-9.0) μm in length and 32.0 ± 2.5 (27.0-38.2) μm in thickness. Sutural line is straight and visible between valves. Polar capsules are subspherical with 3.15 ± 0.63 (2.7-3.6) μm long and 1.9 ± 0.14 (1.8-2.0) μm wide. Posterior spore angle is slightly concave 160°-175°. Molecular analysis based on the small subunit 18S rDNA sequence shows that C. gouletti n. sp. is different from all other ceratomyxid species DNA sequences in GenBank. Phylogenetic trees clustered the new species with long-branching Ceratomyxa species, and it was closely related to the species Ceratomyxa longipes from two gadid fish hosts with 89% bootstrap support.

Development and sexual dimorphism of the sonic system in three deep-sea neobythitine fishes and comparisons between upper mid and lower continental slope

NASA Astrophysics Data System (ADS)

Fine, Michael L.; Ali, Heba A.; Nguyen, Thanh Kim; Mok, Hin-Kiu; Parmentier, Eric

2018-01-01

Based on morphology, NB Marshall identified cusk-eels (family Ophidiidae) as one of the chief sound-producing groups on the continental slope. Due to food scarcity, we hypothesized that sonic systems will be reduced at great depths despite their potential importance in sexual reproduction. We examined this hypothesis in the cusk-eel subfamily Neobythitinae by comparing sonic morphology in Atlantic species from the upper-mid (Dicrolene intronigra) and deeper continental slope (Porogadus miles and Bathyonus pectoralis) with three Taiwanese species previously described from the upper slope (Hoplobrotula armatus, Neobythites longipes and N. unimaculatus). In all six species, medial muscles are heavier in males than in females. Dicrolene has four pairs of sonic muscles similar to the shallow Pacific species, suggesting neobythitine sonic anatomy is conservative and sufficient food exists to maintain a well-developed system at depths exceeding 1 km. The sonic system in Porogadus and Bathyonus was reduced to a single pair of ventral medial muscles that connects to a smaller and thinner swimbladder via a long tendon. Small muscle fiber diameters, a likely indicator of rapid contraction, were present in males of five of the species. However, in Bathyonus, the deepest species (pale coloration, reduced eye size, shorter sonic muscles and longer tendons), muscle fibers were larger suggesting an adaptation to facilitate rapid bladder movement for sound production while using slower contractions and less metabolic energy. The six species separate into three groups in length-weight regressions: the three upper slope species have the greatest weights per unit length, Dicrolene is lower, and the two deep species are further reduced consistent with the hypothesis that food limitation affects sonic anatomy at great depths.

In vitro antimalarial activity of extracts of some plants from a biological reserve in Costa Rica.

PubMed

Chinchilla, Misael; Valerio, Idalia; Sánchez, Ronald; Mora, Víctor; Bagnarello, Vanessa; Martínez, Laura; Gonzalez, Antonieta; Vanegas, Juan Carlos; Apestegui, Alvaro

2012-06-01

Treatment with the usual antimalarial drugs, have induced parasite resistance, reinforcing the need to finding natural antimalarial components that would be found on plants from the forest. Therefore, we decided to look for these components in Costa Rican plants from a protected forest area. Fresh and dry extracts of roots, bark, leaves, flowers and fruits of 25 plants from a biological reserve in Costa Rica, Reserva Biol6gica Alberto Manuel Brenes (REBAMB), were studied in vitro for the presence of substances with antimalarial activity. By studying the inhibition of P berghei schizogony, we assessed the antimalarial activity of several plant extracts: Aphelandra aurantiaca, A. tridentata (Acanthaceae); Xanthosoma undipes (Araceae); Iriartea deltoidea (Arecaceae); Neurolaena lobata (Asteraceae); Senna papillosa, Pterocarpus hayessi, Lonchocarpus pentaphyllus (Fabaceae); Nectandra membranacea, Persea povedae, Cinamomum chavarrianum (Lauraceae); Hampea appendiculata (Malvaceae); Ruagea glabra, Guarea glabra (Meliaceae); Psidium guajava (Myrtaceae); Bocconia frutescens (Papaveraceae); Piper friedrichsthalii (Piperaceae); Clematis dioica (Ranunculaceae); Prunus annularis (Rosaceae); Siparuna thecaphora (Siparunaceae); Solanum arboreum, Witheringia solanacea (Solanaceae); Ticodendrum incognitum (Ticodendraceae); Heliocarpus appendiculatus (Tiliaceae) and Myriocarpa longipes (Urticaceae). We used different parts of the plants as well as fresh and dried extracts for testing IC50. The solid content of the extracts ranged from 1-71.9 microg/mL. The fresh extracts showed stronger activity than the dry ones. Since the plants showing the strongest antimalarial activity are very common in Central America, and some similar genera of these plants have shown positives results in South America, we considered important to present these findings for discussion. On the other hand, this is the first systematic study of this kind ever realized in a circumscribed and protected area of

Influence of the hydrodynamic conditions on the accessibility of Aristeus antennatus and other demersal species to the deep water trawl fishery off the Balearic Islands (western Mediterranean)

NASA Astrophysics Data System (ADS)

Amores, Angel; Rueda, Lucía; Monserrat, Sebastià; Guijarro, Beatriz; Pasqual, Catalina; Massutí, Enric

2014-10-01

Monthly catches per unit of effort (CPUE) of adult red shrimp (Aristeus antennatus), reported in the deep water bottom trawl fishery developed on the Sóller fishing ground off northern Mallorca (Western Mediterranean), and the mean ocean surface vorticity in the surrounding areas are compared between 2000 and 2010. A good correlation is found between the rises in the surrounding surface vorticity and the drops in the CPUE of the adult red shrimp. This correlation could be explained by assuming that most of the surface vorticity episodes could reach the bottom, increasing the seabed velocities and producing sediment resuspension, which could affect the near bottom water turbidity. A. antennatus would respond to this increased turbidity disappearing from the fishing grounds, probably moving downwards to the deeper waters. This massive displacement of red shrimp specimens away from the fishing grounds would consequently decrease their accessibility to fishing exploitation. Similar although more intense responses have been observed during the downslope shelf dense water current episodes that occurred in a submarine canyon, northeast of the Iberian peninsula. The proposed mechanism suggesting how the surface vorticity observed can affect the bottom sediments is investigated using a year-long moored near-bottom current meter and a sediment trap moored near the fishing grounds. The relationship between vorticity and catches is also explored for fish species (Galeus melastomus, Micromesistius poutassou, Phycis blennoides) and other crustacean (Geryon longipes and Nephrops norvegicus), considered as by-catch of the deep water fishery in the area. Results appear to support the suggestion that the water turbidity generated by the vorticity episodes is significant enough to affect the dynamics of the demersal species.

Variation in crown light utilization characteristics among tropical canopy trees.

PubMed

Kitajima, Kaoru; Mulkey, Stephen S; Wright, S Joseph

2005-02-01

Light extinction through crowns of canopy trees determines light availability at lower levels within forests. The goal of this paper is the exploration of foliage distribution and light extinction in crowns of five canopy tree species in relation to their shoot architecture, leaf traits (mean leaf angle, life span, photosynthetic characteristics) and successional status (from pioneers to persistent). Light extinction was examined at three hierarchical levels of foliage organization, the whole crown, the outermost canopy and the individual shoots, in a tropical moist forest with direct canopy access with a tower crane. Photon flux density and cumulative leaf area index (LAI) were measured at intervals of 0.25-1 m along multiple vertical transects through three to five mature tree crowns of each species to estimate light extinction coefficients (K). Cecropia longipes, a pioneer species with the shortest leaf life span, had crown LAI <0.5. Among the remaining four species, crown LAI ranged from 2 to 8, and species with orthotropic terminal shoots exhibited lower light extinction coefficients (0.35) than those with plagiotropic shoots (0.53-0.80). Within each type, later successional species exhibited greater maximum LAI and total light extinction. A dense layer of leaves at the outermost crown of a late successional species resulted in an average light extinction of 61% within 0.5 m from the surface. In late successional species, leaf position within individual shoots does not predict the light availability at the individual leaf surface, which may explain their slow decline of photosynthetic capacity with leaf age and weak differentiation of sun and shade leaves. Later-successional tree crowns, especially those with orthotropic branches, exhibit lower light extinction coefficients, but greater total LAI and total light extinction, which contribute to their efficient use of light and competitive dominance.

Static vs dynamic settlement and adhesion of diatoms to ship hull coatings.

PubMed

Zargiel, Kelli A; Swain, Geoffrey W

2014-01-01

Many experiments utilize static immersion tests to evaluate the performance of ship hull coatings. These provide valuable data; however, they do not accurately represent the conditions both the hull and fouling organisms encounter while a ship is underway. This study investigated the effect of static and dynamic immersion on the adhesion and settlement of diatoms to one antifouling coating (BRA 640), four fouling-release coatings (Intersleek(®) 700, Intersleek(®) 900, Hempasil X3, and Dow Corning 3140) and one standard surface (Intergard(®) 240 Epoxy). Differences in community composition were observed between the static and dynamic treatments. Achnanthes longipes was present on all coatings under static immersion, but was not present under dynamic immersion. This was also found for diatoms in the genera Bacillaria and Gyrosigma. Melosira moniformis was the only diatom present under dynamic conditions, but not static conditions. Several common fouling diatom genera were present on panels regardless of treatment: Amphora, Cocconeis, Entomoneis Cylindrotheca, Licmophora, Navicula, Nitzschia, Plagiotropis, and Synedra. Biofilm adhesion, diatom abundance and diatom diversity were found to be significantly different between static and dynamic treatments; however, the difference was dependent on coating and sampling date. Several coatings (Epoxy, DC 3140 and IS 700) had significantly higher biofilm adhesion on dynamically treated panels on at least one of the four sampling dates, while all coatings had significantly higher diatom abundance on at least one sampling date. Diversity was significantly greater on static panels than dynamic panels for Epoxy, IS 700 and HX3 at least once during the sampling period. The results demonstrate how hydrodynamic stress will significantly influence the microfouling community. Dynamic immersion testing is required to fully understand how antifouling surfaces will respond to biofilm formation when subjected to the stresses experienced

The bumblebees of North China (Apidae, Bombus Latreille).

PubMed

An, Jiandong; Huang, Jiaxing; Shao, Youquan; Zhang, Shiwen; Wang, Biao; Liu, Xinyu; Wu, Jie; Williams, Paul H

2014-07-08

Bumblebees are important pollinators for wild flowers and agricultural crops. North China is a region of varied geomorphology and vegetation, with plateaus, plains, mountains and deserts, and is part of the greatest hotspot of bumblebee diversity worldwide. We report on a field survey of the bumblebees of North China made between 2005-2012. A sample of 21,636 bumblebee specimens are assigned to 76 species. One older specimen held in London added one more species to this list. Together, these 77 species represent 10 subgenera of the genus Bombus. Seven species are recorded from North China for the first time: B. (St.) distinguendus, B. (Th.) anachoreta, B. (Th.) pseudobaicalensis, B. (Th.) exil, B. (Ps.) campestris, B. (Pr.) infirmus and B. (Ag.) validus. We provide identification keys for both males and females, photographs of the common colour patterns, and distribution maps for all species. We describe variation in local species richness and abundance, and list the food plants used by bumblebees in North China. The most abundant 10 bumblebee species are: B. (Ml.) pyrosoma, B. (Bo.) lantschouensis, B. (Bo.) patagiatus, B. (St.) melanurus, B. (Sb.) sibiricus, B. (Bo.) ignitus, B. (Th.) hedini, B. (Pr.) picipes, B. (Mg.) trifasciatus and B. (Mg.) longipes. Bumblebees are distributed widely within North China, from low elevations near the edge of the North-China plain to high elevations at the edge of the east Qinghai-Tibetan plateau (65-4011 m). The highest species richness is found in meadows of the high elevation east Qinghai-Tibetan plateau and in forests of the Qilianshan mountains in southwestern Gansu. The 337 food plant species recorded here belong to 49 families, showing that bumblebees play an important role in interconnecting agricultural and natural ecosystems in North China. 

Predicting reintroduction outcomes for highly vulnerable species that do not currently coexist with their key threats.

PubMed

Parlato, Elizabeth H; Armstrong, Doug P

2018-02-17

Predicting reintroduction outcomes before populations are released is inherently challenging. It becomes even more difficult when the species being considered for reintroduction no longer co-exists with the key threats limiting its distribution. However, data from other species facing the same threats can be used to make predictions under these circumstances. We present an integrated Bayesian modelling approach for predicting growth of a reintroduced population at a range of predator densities when no data are available for the species in the presence of that predator. North Island saddlebacks (Philesturnus rufusater) were extirpated from mainland New Zealand by exotic mammalian predators, particularly ship rats (black rats, Rattus rattus), but are now being considered for reintroduction to sites with intensive predator control, creating an opportunity to develop this approach. We initially modeled data from previous saddleback reintroductions to predator-free sites to predict population growth at a new predator-free site while accounting for random variation in vital rates among sites. We then predict population growth at different rat tracking rates (an index of rat density) by incorporating a previously modelled relationship between rat tracking and vital rates of another predator-sensitive species, the North Island robin (Petroica longipes), and account for the greater vulnerability of saddlebacks to rat predation using information on historical declines of both species. The results allow population growth to be predicted as a function of management effort while accounting for uncertainty, allowing formal decision analysis to be used to decide whether to proceed with a reintroduction. Similar approaches could potentially be applied to other situations where data on the species of interest are limited, providing an alternative to decision making based solely on expert judgment. This article is protected by copyright. All rights reserved. This article is

The seed plant flora of the Mount Jinggangshan region, southeastern China.

PubMed

Wang, Lei; Liao, Wenbo; Chen, Chunquan; Fan, Qiang

2013-01-01

The Mount Jinggangshan region is located between Jiangxi and Hunan provinces in southeastern China in the central section of the Luoxiao Mountains. A detailed investigation of Mount Jinggangshan region shows that the seed plant flora comprises 2,958 species in 1,003 genera and 210 families (Engler's system adjusted according to Zhengyi Wu's concept). Among them, 23 species of gymnospermae belong to 17 genera and 9 families, and 2,935 species of angiosperms are in 986 genera and 201 families. Moreover, they can also be sorted into woody plants (350 genera and 1,295 species) and herbaceous plants (653 genera and 1,663 species). The dominant families are mainly Fagaceae, Lauraceae, Theaceae, Hamamelidaceae, Magnoliaceae, Ericaceae, Styracaceae, Aquifoliaceae, Elaeocarpaceae, Aceraceae, Rosaceae, Corylaceae, Daphniphyllaceae, Symplocaceae, Euphorbiaceae, Pinaceae, Taxodiaceae, Cupressaceae and Taxaceae. Ancient and relic taxa include Ginkgo biloba, Fokieniahodginsii, Amentotaxusargotaenia, Disanthuscercidifolia subsp. longipes, Hamamelismollis, Manglietiafordiana, Magnoliaofficinalis, Tsoongiodendronodorum, Fortuneariasinensis, Cyclocaryapaliurus, Eucommiaulmoides, Sargentodoxacuneata, Bretschneiderasinensis, Camptothecaacuminata, Tapisciasinensis, etc. The flora of Mount Jinggangshan region includes 79 cosmopolitan genera and 924 non-cosmopolitan genera, which are 7.88% and 92.12% of all genera. The latter includes 452 tropical genera (48.92%) and 472 temperate genera (51.08%). The temperate elements include 44 genera endemic to China, accounting for 4.76% of all genera. Among 1,003 genera, 465 have only a single species and 401 are oligotypic genera (with 2-5 species). These genera account for 86.34% of all genera. The floristic analysis indicates that the flora of Mount Jinggangshan region is closely related to the flora of Mount Wuyishan region in southeastern China. The flora of Mount Jinggangshan region also contains many elements of central and southern China

The Seed Plant Flora of the Mount Jinggangshan Region, Southeastern China

PubMed Central

Wang, Lei; Liao, Wenbo; Chen, Chunquan; Fan, Qiang

2013-01-01

The Mount Jinggangshan region is located between Jiangxi and Hunan provinces in southeastern China in the central section of the Luoxiao Mountains. A detailed investigation of Mount Jinggangshan region shows that the seed plant flora comprises 2,958 species in 1,003 genera and 210 families (Engler’s system adjusted according to Zhengyi Wu’s concept). Among them, 23 species of gymnospermae belong to 17 genera and 9 families, and 2,935 species of angiosperms are in 986 genera and 201 families. Moreover, they can also be sorted into woody plants (350 genera and 1,295 species) and herbaceous plants (653 genera and 1,663 species). The dominant families are mainly Fagaceae, Lauraceae, Theaceae, Hamamelidaceae, Magnoliaceae, Ericaceae, Styracaceae, Aquifoliaceae, Elaeocarpaceae, Aceraceae, Rosaceae, Corylaceae, Daphniphyllaceae, Symplocaceae, Euphorbiaceae, Pinaceae, Taxodiaceae, Cupressaceae and Taxaceae. Ancient and relic taxa include Ginkgo biloba, Fokienia hodginsii , Amentotaxus argotaenia , Disanthus cercidifolia subsp. longipes , Hamamelis mollis , Manglietia fordiana , Magnolia officinalis , Tsoongiodendron odorum , Fortunearia sinensis , Cyclocarya paliurus , Eucommia ulmoides , Sargentodoxa cuneata , Bretschneidera sinensis , Camptotheca acuminata , Tapiscia sinensis , etc. The flora of Mount Jinggangshan region includes 79 cosmopolitan genera and 924 non-cosmopolitan genera, which are 7.88% and 92.12% of all genera. The latter includes 452 tropical genera (48.92%) and 472 temperate genera (51.08%). The temperate elements include 44 genera endemic to China, accounting for 4.76% of all genera. Among 1,003 genera, 465 have only a single species and 401 are oligotypic genera (with 2-5 species). These genera account for 86.34% of all genera. The floristic analysis indicates that the flora of Mount Jinggangshan region is closely related to the flora of Mount Wuyishan region in southeastern China. The flora of Mount Jinggangshan region also contains many elements

Review of the steatiticus-species group of the cuskeel genus Neobythites (Ophidiidae) from the Indo-Pacific, with description of two new species.

PubMed

Uiblein, Franz; Nielsen, JØrgen G

2018-02-26

This review was motivated by the recent collection of a specimen of the specious cuskeel genus Neobythites (Ophidiidae) off Myanmar and difficulties to identify it based on the available literature. This specimen has an ocellus consisting of a dark oval spot and a concentric white ring placed on the dorsal fin at mid-body, typical for many Neobythites species. It belongs to a group of single-ocellus bearing species which have no or only one weakly developed, flat preopercular spine which we term here the "steatiticus-species group". Before this study, the steatiticus group consisted of six Indo-Pacific species, N. longipes, N. malhaensis, N. malayanus, N. meteori, N. steatiticus, and N. stefanovi, and the Atlantic N. monocellatus. From 136 specimens representing the six Indo-Pacific steatiticus-group species counts or measurements of 12 meristic, 14 body shape, five ocellus and six otolith characters were obtained and compared, revealing two undescribed species. We describe N. gloriae n. sp. from the Arabian Gulf and inner Gulf of Oman based on nine specimens that had been previously misidentified as N. steatiticus and N. stefanovi. The latter species differ from the new species and from each other in the combination of five characters, head length, orbit length, gill-filament length, ocellus-spot distance, and ocellus-spot size. The second new species described is N. lombokensis n. sp. which consists of a single specimen from off SE Lombok, southern Indonesia. It differs from all other steatiticus-group species in having a larger ocellus spot and in several meristic and morphometric characters. The specimen from off Myanmar, eastern Bay of Bengal, was found to belong to N. steatiticus, providing new information on distribution and colour. Diagnoses, updated distribution information, and a key for the eight Indo-Pacific steatiticus-group species are here presented. We discuss our findings with special emphasis on the variation and possible function of colour

Movement trajectories and habitat partitioning of small mammals in logged and unlogged rain forests on Borneo.

PubMed

Wells, Konstans; Pfeiffer, Martin; Lakim, Maklarin B; Kalko, Elisabeth K V

2006-09-01

1. Non-volant animals in tropical rain forests differ in their ability to exploit the habitat above the forest floor and also in their response to habitat variability. It is predicted that specific movement trajectories are determined both by intrinsic factors such as ecological specialization, morphology and body size and by structural features of the surrounding habitat such as undergrowth and availability of supportive structures. 2. We applied spool-and-line tracking in order to describe movement trajectories and habitat segregation of eight species of small mammals from an assemblage of Muridae, Tupaiidae and Sciuridae in the rain forest of Borneo where we followed a total of 13,525 m path. We also analysed specific changes in the movement patterns of the small mammals in relation to habitat stratification between logged and unlogged forests. Variables related to climbing activity of the tracked species as well as the supportive structures of the vegetation and undergrowth density were measured along their tracks. 3. Movement patterns of the small mammals differed significantly between species. Most similarities were found in congeneric species that converged strongly in body size and morphology. All species were affected in their movement patterns by the altered forest structure in logged forests with most differences found in Leopoldamys sabanus. However, the large proportions of short step lengths found in all species for both forest types and similar path tortuosity suggest that the main movement strategies of the small mammals were not influenced by logging but comprised generally a response to the heterogeneous habitat as opposed to random movement strategies predicted for homogeneous environments. 4. Overall shifts in microhabitat use showed no coherent trend among species. Multivariate (principal component) analysis revealed contrasting trends for convergent species, in particular for Maxomys rajah and M. surifer as well as for Tupaia longipes and T

Comparison between ROV video and Agassiz trawl methods for sampling deep water fauna of submarine canyons in the Northwestern Mediterranean Sea with observations on behavioural reactions of target species

NASA Astrophysics Data System (ADS)

Ayma, A.; Aguzzi, J.; Canals, M.; Lastras, G.; Bahamon, N.; Mecho, A.; Company, J. B.

2016-08-01

In this paper we present a comparison between Remotely Operated Vehicle (ROV) and Agassiz trawling methods for sampling deep-water fauna in three submarine canyons of the Northwestern Mediterranean Sea and describe the behavioural reactions of fishes and crustacean decapods to ROV approach. 10 ROV dives, where 3583 individuals were observed and identified to species level, and 8 Agassiz trawls were carried out in a depth range of 750-1500 m. As noticed in previous studies, abundances of fishes and decapod crustaceans were much higher in the ROV videos than in Agassiz trawl samples, as the latter are designed for the retrieval of benthic, less motile species in permanent contact with the bottom. In our observations fish abundance was one order of magnitude higher with ROV (4110.22 ind/km2) than with Agassiz trawl (350.88 ind/km2), whereas decapod crustaceans were six times more abundant in ROV videos (6362.40 ind/km2) than in Agassiz samples (1364.52 ind/km2). The behaviour of highly motile fishes was analysed in terms of stationary positioning over the seafloor and avoidance or attraction to ROV approach. The most frequently occurring fish species Coelorinchus mediterraneus, Nezumia aequalis, Bathypterois dubius, Lepidion lepidion, Trachyrincuss scabrus and Polyacanthonotus rissoanus did not react to the presence of the ROV in most cases (>50%). Only B. dubius (11%), Lepidion lepidion (14.8%), P. rissoanus (41%) and T. scabrus (14.3%) reacted to ROV approach. More than 60% of less motile species, such as crustacean decapods, did not respond to ROV presence either. Only 33.3% of Geryon longipes, 36.2% of Munida spp. and 29.79% of Pagurus spp. were observed avoiding or defensively reacting to the ROV. The comparison of results obtained with ROV and trawl sampling is of ecological relevance since ROV can report observations in areas where trawling is technically unfeasible. The lack of reaction by most fish and crustacean decapod specimens further confirms that ROV

Hymenoscyphus fraxineus vs. Hymenoscyphus albidus – A comparative light microscopic study on the causal agent of European ash dieback and related foliicolous, stroma-forming species

PubMed Central

Baral, Hans-Otto; Bemmann, Martin

2014-01-01

in combination with molecular work. Hy. fraxineus was described from Europe as a cryptic species that differed from Hy. albidus by molecular data alone. However, the Hy. albidus/Hy. fraxineus species complex represents one of many examples within the ascomycetes in which subtle microscopic differences between closely related species, in this case the presence or absence of croziers at the ascus base, are strictly correlated with molecular characteristics. Two species that closely resemble Hy. albidus and Hy. fraxineus form pseudosclerotia in Aesculus leaves and again differ from each other mainly in the ascus base: Hymenoscyphus aesculi on Aesculus hippocastanum from Europe lacks croziers, whereas Hymenoscyphus honshuanus from Japan on Aesculus turbinata possesses croziers. Other taxa treated here include Hymenoscyphus vacini, a European species growing on stromatized net veins of skeletonized leaves of Acer, and Hymenoscyphus torquatus, a Chinese species on unidentified herbaceous stems. An equivalent stroma-forming North American species on leaves of Fraxinus, Rutstroemia longipes (Rutstroemiaceae), is discussed and compared. A key to the Hymenoscyphus species that form a dark stroma on leaves of Acer, Aesculus, Fraxinus, and Picrasma is provided. PMID:25544935

Food web structure of the epibenthic and infaunal invertebrates on the Catalan slope (NW Mediterranean): Evidence from δ 13C and δ 15N analysis

NASA Astrophysics Data System (ADS)

Fanelli, E.; Papiol, V.; Cartes, J. E.; Rumolo, P.; Brunet, C.; Sprovieri, M.

2011-01-01

The food-web structure of the epibenthic and infaunal invertebrates on the continental slope of the Catalan Sea (Balearic basin, NW Mediterranean) was investigated using carbon and nitrogen stable isotopes on a total of 34 species, and HPLC pigment analyses for three key species. Samples were collected close to Barcelona (NE Iberian Peninsula), between 650 and 800 m depth and between February 2007 and February 2008. Mean δ 13C values ranged from -21.0‰ (small Calocaris macandreae and Amphipholis squamata) to -14.5‰ ( Sipunculus norvegicus). Values of δ 15N ranged from 4.0‰ ( A. squamata) to 12.1‰ ( Molpadia musculus). The stable isotope ratios of benthic fauna displayed a continuum of values (e.g. δ 15N range of 8‰), confirming a wide spectrum of feeding strategies (from active suspension feeders to predators) and complex food webs. According to the available information on diets of benthic fauna, the lowest values were found for surface deposit feeders (small C. macandrae and the two ophiuroids A. squamata and Amphiura chiajei) and active suspension feeders ( Abra longicallus and Scalpellum scalpellum) feeding on different sizes of particulate organic matter (POM), among which small particles may exhibit lower δ 15N. High annual mean δ 15N values were found among sub-surface deposit feeders, exploiting refractory or frequently recycled organic matter that is enriched in δ 15N. Carnivorous polychaetes ( Nephtys spp., Oenonidae and Polynoidae) and large decapods ( Geryon longipes and Paromola cuvieri) also displayed high δ 15N values. δ 13C ranges were particularly wide among surface deposit feeders (ranging from -21.0‰ to -16.4‰), suggesting exploitation of POM of both terrigenous and oceanic origins. Correlation between δ 13C and δ 15N was generally weak, indicating multiple carbon sources, likely due to the consumption of different kinds of sinking particles (e.g. marine snow, phytodetritus, etc.), sedimented and frequently recycled POM

A systematic revision of Baconia Lewis (Coleoptera, Histeridae, Exosternini).

PubMed

Caterino, Michael S; Tishechkin, Alexey K

2013-01-01

turgifrons sp. n., Baconia crassa sp. n., Baconia anthracina sp. n., Baconia emarginata sp. n., Baconia obsoleta sp. n.], Baconia ruficauda group [Baconia ruficauda sp. n., Baconia repens sp. n.], Baconia angusta group [Baconia angusta Schmidt, 1893a, Baconia incognita sp. n., Baconia guartela sp. n., Baconia bullifrons sp. n., Baconia cavei sp. n., Baconia subtilis sp. n., Baconia dentipes sp. n., Baconia rubripennis sp. n., Baconia lunatifrons sp. n.], Baconia aeneomicans group [Baconia aeneomicans (Horn, 1873), Baconia pulchella sp. n., Baconia quercea sp. n., Baconia stephani sp. n., Baconia irinae sp. n., Baconia fornix sp. n., Baconia slipinskii Mazur, 1981, Baconia submetallica sp. n., Baconia diminua sp. n., Baconia rufescens sp. n., Baconia punctiventer sp. n., Baconia aulaea sp. n., Baconia mustax sp. n., Baconia plebeia sp. n., Baconia castanea sp. n., Baconia lescheni sp. n., Baconia oblonga sp. n., Baconia animata sp. n., Baconia teredina sp. n., Baconia chujoi (Cooman, 1941), Baconia barbarus (Cooman, 1934), Baconia reposita sp. n., Baconia kubani sp. n., Baconia wallacea sp. n., Baconia bigemina sp. n., Baconia adebratti sp. n., Baconia silvestris sp. n.], Baconia cylindrica group [Baconia cylindrica sp. n., Baconia chatzimanolisi sp. n.], Baconia gibbifer group [Baconia gibbifer sp. n., B. piluliformis sp. n., Baconia maquipucunae sp. n., Baconia tenuipes sp. n., Baconia tuberculifer sp. n., Baconia globosa sp. n.], Baconia insolita group [Baconia insolita (Schmidt, 1893a), comb. n., Baconia burmeisteri (Marseul, 1870), Baconia tricolor sp. n., Baconia pilicauda sp. n.], Baconia riouka group [Baconia riouka (Marseul, 1861), Baconia azuripennis sp. n.], Baconia famelica group [Baconia famelica sp. n., Baconia grossii sp. n., Baconia redemptor sp. n., Baconia fortis sp. n., Baconia longipes sp. n., Baconia katieae sp. n., Baconia cavifrons (Lewis, 1893), comb. n., Baconia haeterioides sp. n.], Baconia micans group [Baconia micans (Schmidt, 1889a), Baconia

A systematic revision of Baconia Lewis (Coleoptera, Histeridae, Exosternini)

PubMed Central

Caterino, Michael S.; Tishechkin, Alexey K.

2013-01-01

), Baconia turgifrons sp. n., Baconia crassa sp. n., Baconia anthracina sp. n., Baconia emarginata sp. n., Baconia obsoleta sp. n.], Baconia ruficauda group [Baconia ruficauda sp. n., Baconia repens sp. n.], Baconia angusta group [Baconia angusta Schmidt, 1893a, Baconia incognita sp. n., Baconia guartela sp. n., Baconia bullifrons sp. n., Baconia cavei sp. n., Baconia subtilis sp. n., Baconia dentipes sp. n., Baconia rubripennis sp. n., Baconia lunatifrons sp. n.], Baconia aeneomicans group [Baconia aeneomicans (Horn, 1873), Baconia pulchella sp. n., Baconia quercea sp. n., Baconia stephani sp. n., Baconia irinae sp. n., Baconia fornix sp. n., Baconia slipinskii Mazur, 1981, Baconia submetallica sp. n., Baconia diminua sp. n., Baconia rufescens sp. n., Baconia punctiventer sp. n., Baconia aulaea sp. n., Baconia mustax sp. n., Baconia plebeia sp. n., Baconia castanea sp. n., Baconia lescheni sp. n., Baconia oblonga sp. n., Baconia animata sp. n., Baconia teredina sp. n., Baconia chujoi (Cooman, 1941), Baconia barbarus (Cooman, 1934), Baconia reposita sp. n., Baconia kubani sp. n., Baconia wallacea sp. n., Baconia bigemina sp. n., Baconia adebratti sp. n., Baconia silvestris sp. n.], Baconia cylindrica group [Baconia cylindrica sp. n., Baconia chatzimanolisi sp. n.], Baconia gibbifer group [Baconia gibbifer sp. n., B. piluliformis sp. n., Baconia maquipucunae sp. n., Baconia tenuipes sp. n., Baconia tuberculifer sp. n., Baconia globosa sp. n.], Baconia insolita group [Baconia insolita (Schmidt, 1893a), comb. n., Baconia burmeisteri (Marseul, 1870), Baconia tricolor sp. n., Baconia pilicauda sp. n.], Baconia riouka group [Baconia riouka (Marseul, 1861), Baconia azuripennis sp. n.], Baconia famelica group [Baconia famelica sp. n., Baconia grossii sp. n., Baconia redemptor sp. n., Baconia fortis sp. n., Baconia longipes sp. n., Baconia katieae sp. n., Baconia cavifrons (Lewis, 1893), comb. n., Baconia haeterioides sp. n.], Baconia micans group [Baconia micans (Schmidt, 1889a