When Does Frequency-Independent Selection Maintain Genetic Variation?

PubMed

Novak, Sebastian; Barton, Nicholas H

2017-10-01

Frequency-independent selection is generally considered as a force that acts to reduce the genetic variation in evolving populations, yet rigorous arguments for this idea are scarce. When selection fluctuates in time, it is unclear whether frequency-independent selection may maintain genetic polymorphism without invoking additional mechanisms. We show that constant frequency-independent selection with arbitrary epistasis on a well-mixed haploid population eliminates genetic variation if we assume linkage equilibrium between alleles. To this end, we introduce the notion of frequency-independent selection at the level of alleles, which is sufficient to prove our claim and contains the notion of frequency-independent selection on haploids. When selection and recombination are weak but of the same order, there may be strong linkage disequilibrium; numerical calculations show that stable equilibria are highly unlikely. Using the example of a diallelic two-locus model, we then demonstrate that frequency-independent selection that fluctuates in time can maintain stable polymorphism if linkage disequilibrium changes its sign periodically. We put our findings in the context of results from the existing literature and point out those scenarios in which the possible role of frequency-independent selection in maintaining genetic variation remains unclear. Copyright © 2017 by the Genetics Society of America.

On the predictability of high water level along the US East Coast: can the Florida Current measurement be an indicator for flooding caused by remote forcing?

NASA Astrophysics Data System (ADS)

Ezer, Tal; Atkinson, Larry P.

2017-06-01

Recent studies show that in addition to wind and air pressure effects, a significant portion of the variability of coastal sea level (CSL) along the US East Coast can be attributed to non-local factors such as variations in the Gulf Stream and the North Atlantic circulation; these variations can cause unpredictable coastal flooding. The Florida Current transport (FCT) measurement across the Florida Straits monitors those variations, and thus, the study evaluated the potential of using the FCT as an indicator for anomalously high water level along the coast. Hourly water level data from 12 tide gauge stations over 12 years are used to construct records of maximum daily water levels (MDWL) that are compared with the daily FCT data. An empirical mode decomposition (EMD) approach is used to divide the data into high-frequency modes (periods T < ˜30 days), middle-frequency modes (˜30 days < T < ˜90 days), and low-frequency modes (˜90 days < T < ˜1 year). Two predictive measures are tested: FCT and FCT change (FCC). FCT is anti-correlated with MDWL in high-frequency modes but positively correlated with MDWL in low-frequency modes. FCC on the other hand is always anti-correlated with MDWL for all frequency bands, and the high water signal lags behind FCC for almost all stations, thus providing a potential predictive skill (i.e., whenever a weakening trend is detected in the FCT, anomalously high water is expected along the coast over the next few days). The MDWL-FCT correlation in the high-frequency modes is maximum in the lower Mid-Atlantic Bight, suggesting influence from the meandering Gulf Stream after it separates from the coast. However, the correlation in low-frequency modes is maximum in the South Atlantic Bight, suggesting impact from variations in the wind pattern over subtropical regions. The middle-frequency and low-frequency modes of the FCT seem to provide the best predictor for medium to large flooding events; it is estimated that ˜10-25% of the sea level variability in those modes can be attributed to variations in the FCT. An example from Hurricane Joaquin (September-October, 2015) demonstrates how an offshore storm that never made landfall can cause a weakening of the FCT and unexpected high water level and flooding along the US East Coast. A regression-prediction model based on the MDWL-FCT correlation shows some skill in estimating high water levels during past storms; the water level prediction is more accurate for slow-moving and offshore storms than it is for fast-moving storms. The study can help to improve water level prediction since current storm surge models rely on local wind but may ignore remote forcing.

Study on ion energy distribution in low-frequency oscillation time scale of Hall thrusters

NASA Astrophysics Data System (ADS)

Wei, Liqiu; Li, Wenbo; Ding, Yongjie; Han, Liang; Yu, Daren; Cao, Yong

2017-11-01

This paper reports on the dynamic characteristics of the distribution of ion energy during Hall thruster discharge in the low-frequency oscillation time scale through experimental studies, and a statistical analysis of the time-varying peak and width of ion energy and the ratio of high-energy ions during the low-frequency oscillation. The results show that the ion energy distribution exhibits a periodic change during the low-frequency oscillation. Moreover, the variation in the ion energy peak is opposite to that of the discharge current, and the variations in width of the ion energy distribution and the ratio of high-energy ions are consistent with that of the discharge current. The variation characteristics of the ion density and discharge potential were simulated by one-dimensional hybrid-direct kinetic simulations; the simulation results and analysis indicate that the periodic change in the distribution of ion energy during the low-frequency oscillation depends on the relationship between the ionization source term and discharge potential distribution during ionization in the discharge channel.

Top down and bottom up selection drives variations in frequency and form of a visual signal.

PubMed

Yeh, Chien-Wei; Blamires, Sean J; Liao, Chen-Pan; Tso, I-Min

2015-03-30

The frequency and form of visual signals can be shaped by selection from predators, prey or both. When a signal simultaneously attracts predators and prey selection may favour a strategy that minimizes risks while attracting prey. Accordingly, varying the frequency and form of the silken decorations added to their web may be a way that Argiope spiders minimize predation while attracting prey. Nonetheless, the role of extraneous factors renders the influences of top down and bottom up selection on decoration frequency and form variation difficult to discern. Here we used dummy spiders and decorations to simulate four possible strategies that the spider Argiope aemula may choose and measured the prey and predator attraction consequences for each in the field. The strategy of decorating at a high frequency with a variable form attracted the most prey, while that of decorating at a high frequency with a fixed form attracted the most predators. These results suggest that mitigating the cost of attracting predators while maintaining prey attraction drives the use of variation in decoration form by many Argiope spp. when decorating frequently. Our study highlights the importance of considering top-down and bottom up selection pressure when devising evolutionary ecology experiments.

Study of high performance alloy electroforming

NASA Technical Reports Server (NTRS)

Malone, G. A.

1985-01-01

More panels electroformed with intentional variations of pulse plating parameters are being made. Pulse plating frequency was noted to have a significant effect regarding mechanical properties. The use of a high pulse frequency (assuming fixed duty cycles) results in an increase in ductility and a decrease in ultimate and yield strengths. Electroforming to intermediate frequencies is being done to obtain the best possible combination of ductility and strength. Results of some tests from high frequency specimens are tabulated.

Areas V1 and V2 show microsaccade-related 3-4-Hz covariation in gamma power and frequency.

PubMed

Lowet, E; Roberts, M J; Bosman, C A; Fries, P; De Weerd, P

2016-05-01

Neuronal gamma-band synchronization (25-80 Hz) in visual cortex appears sustained and stable during prolonged visual stimulation when investigated with conventional averages across trials. However, recent studies in macaque visual cortex have used single-trial analyses to show that both power and frequency of gamma oscillations exhibit substantial moment-by-moment variation. This has raised the question of whether these apparently random variations might limit the functional role of gamma-band synchronization for neural processing. Here, we studied the moment-by-moment variation in gamma oscillation power and frequency, as well as inter-areal gamma synchronization, by simultaneously recording local field potentials in V1 and V2 of two macaque monkeys. We additionally analyzed electrocorticographic V1 data from a third monkey. Our analyses confirm that gamma-band synchronization is not stationary and sustained but undergoes moment-by-moment variations in power and frequency. However, those variations are neither random and nor a possible obstacle to neural communication. Instead, the gamma power and frequency variations are highly structured, shared between areas and shaped by a microsaccade-related 3-4-Hz theta rhythm. Our findings provide experimental support for the suggestion that cross-frequency coupling might structure and facilitate the information flow between brain regions. © 2015 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.

Dipole Excitation With A Paul Ion Trap Mass Spectrometer

DOE Office of Scientific and Technical Information (OSTI.GOV)

MacAskill, J. A.; Madzunkov, S. M.; Chutjian, A.

Preliminary results are presented for the use of an auxiliary radiofrequency (rf) excitation voltage in combination with a high purity, high voltage rf generator to perform dipole excitation within a high precision Paul ion trap. These results show the effects of the excitation frequency over a continuous frequency range on the resultant mass spectra from the Paul trap with particular emphasis on ion ejection times, ion signal intensity, and peak shapes. Ion ejection times are found to decrease continuously with variations in dipole frequency about several resonant values and show remarkable symmetries. Signal intensities vary in a complex fashion withmore » numerous resonant features and are driven to zero at specific frequency values. Observed intensity variations depict dipole excitations that target ions of all masses as well as individual masses. Substantial increases in mass resolution are obtained with resolving powers for nitrogen increasing from 114 to 325.« less

Robust Optimization Design Algorithm for High-Frequency TWTs

NASA Technical Reports Server (NTRS)

Wilson, Jeffrey D.; Chevalier, Christine T.

2010-01-01

Traveling-wave tubes (TWTs), such as the Ka-band (26-GHz) model recently developed for the Lunar Reconnaissance Orbiter, are essential as communication amplifiers in spacecraft for virtually all near- and deep-space missions. This innovation is a computational design algorithm that, for the first time, optimizes the efficiency and output power of a TWT while taking into account the effects of dimensional tolerance variations. Because they are primary power consumers and power generation is very expensive in space, much effort has been exerted over the last 30 years to increase the power efficiency of TWTs. However, at frequencies higher than about 60 GHz, efficiencies of TWTs are still quite low. A major reason is that at higher frequencies, dimensional tolerance variations from conventional micromachining techniques become relatively large with respect to the circuit dimensions. When this is the case, conventional design- optimization procedures, which ignore dimensional variations, provide inaccurate designs for which the actual amplifier performance substantially under-performs that of the design. Thus, this new, robust TWT optimization design algorithm was created to take account of and ameliorate the deleterious effects of dimensional variations and to increase efficiency, power, and yield of high-frequency TWTs. This design algorithm can help extend the use of TWTs into the terahertz frequency regime of 300-3000 GHz. Currently, these frequencies are under-utilized because of the lack of efficient amplifiers, thus this regime is known as the "terahertz gap." The development of an efficient terahertz TWT amplifier could enable breakthrough applications in space science molecular spectroscopy, remote sensing, nondestructive testing, high-resolution "through-the-wall" imaging, biomedical imaging, and detection of explosives and toxic biochemical agents.

Inter-annual and decadal changes in teleconnections drive continental-scale synchronization of tree reproduction.

PubMed

Ascoli, Davide; Vacchiano, Giorgio; Turco, Marco; Conedera, Marco; Drobyshev, Igor; Maringer, Janet; Motta, Renzo; Hacket-Pain, Andrew

2017-12-20

Climate teleconnections drive highly variable and synchronous seed production (masting) over large scales. Disentangling the effect of high-frequency (inter-annual variation) from low-frequency (decadal trends) components of climate oscillations will improve our understanding of masting as an ecosystem process. Using century-long observations on masting (the MASTREE database) and data on the Northern Atlantic Oscillation (NAO), we show that in the last 60 years both high-frequency summer and spring NAO, and low-frequency winter NAO components are highly correlated to continent-wide masting in European beech and Norway spruce. Relationships are weaker (non-stationary) in the early twentieth century. This finding improves our understanding on how climate variation affects large-scale synchronization of tree masting. Moreover, it supports the connection between proximate and ultimate causes of masting: indeed, large-scale features of atmospheric circulation coherently drive cues and resources for masting, as well as its evolutionary drivers, such as pollination efficiency, abundance of seed dispersers, and natural disturbance regimes.

High-frequency health data and spline functions.

PubMed

Martín-Rodríguez, Gloria; Murillo-Fort, Carlos

2005-03-30

Seasonal variations are highly relevant for health service organization. In general, short run movements of medical magnitudes are important features for managers in this field to make adequate decisions. Thus, the analysis of the seasonal pattern in high-frequency health data is an appealing task. The aim of this paper is to propose procedures that allow the analysis of the seasonal component in this kind of data by means of spline functions embedded into a structural model. In the proposed method, useful adaptions of the traditional spline formulation are developed, and the resulting procedures are capable of capturing periodic variations, whether deterministic or stochastic, in a parsimonious way. Finally, these methodological tools are applied to a series of daily emergency service demand in order to capture simultaneous seasonal variations in which periods are different.

Top down and bottom up selection drives variations in frequency and form of a visual signal

PubMed Central

Yeh, Chien-Wei; Blamires, Sean J.; Liao, Chen-Pan; Tso, I.-Min

2015-01-01

The frequency and form of visual signals can be shaped by selection from predators, prey or both. When a signal simultaneously attracts predators and prey, selection may favour a strategy that minimizes risks while attracting prey. Accordingly, varying the frequency and form of the silken decorations added to their web may be a way that Argiope spiders minimize predation while attracting prey. Nonetheless, the role of extraneous factors renders the influences of top down and bottom up selection on decoration frequency and form variation difficult to discern. Here we used dummy spiders and decorations to simulate four possible strategies that the spider Argiope aemula may choose and measured the prey and predator attraction consequences for each in the field. The strategy of decorating at a high frequency with a variable form attracted the most prey, while that of decorating at a high frequency with a fixed form attracted the most predators. These results suggest that mitigating the cost of attracting predators while maintaining prey attraction drives the use of variation in decoration form by many Argiope spp. when decorating frequently. Our study highlights the importance of considering top-down and bottom up selection pressure when devising evolutionary ecology experiments. PMID:25828030

A New Cloud and Aerosol Layer Detection Method Based on Micropulse Lidar Measurements

NASA Astrophysics Data System (ADS)

Wang, Q.; Zhao, C.; Wang, Y.; Li, Z.; Wang, Z.; Liu, D.

2014-12-01

A new algorithm is developed to detect aerosols and clouds based on micropulse lidar (MPL) measurements. In this method, a semi-discretization processing (SDP) technique is first used to inhibit the impact of increasing noise with distance, then a value distribution equalization (VDE) method is introduced to reduce the magnitude of signal variations with distance. Combined with empirical threshold values, clouds and aerosols are detected and separated. This method can detect clouds and aerosols with high accuracy, although classification of aerosols and clouds is sensitive to the thresholds selected. Compared with the existing Atmospheric Radiation Measurement (ARM) program lidar-based cloud product, the new method detects more high clouds. The algorithm was applied to a year of observations at both the U.S. Southern Great Plains (SGP) and China Taihu site. At SGP, the cloud frequency shows a clear seasonal variation with maximum values in winter and spring, and shows bi-modal vertical distributions with maximum frequency at around 3-6 km and 8-12 km. The annual averaged cloud frequency is about 50%. By contrast, the cloud frequency at Taihu shows no clear seasonal variation and the maximum frequency is at around 1 km. The annual averaged cloud frequency is about 15% higher than that at SGP.

Amplitude Variability in gamma Dor and delta Sct Stars Observed by Kepler

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guzik, Joyce Ann; Kosak, Mary Katherine; Bradley, Paul Andrew

2015-08-17

The NASA Kepler spacecraft data revealed a large number of new multimode nonradially pulsating gamma Dor and delta Sct variable stars. The Kepler high-precision long time-series photometry makes it possible to study amplitude variations of the frequencies, and recent literature on amplitude and frequency variations in nonradially pulsating variables is summarized. Several methods are applied to study amplitude variability in about a dozen gamma Doradus or delta Scuti candidate variable stars observed for several quarters as part of the Kepler Guest Observer program. The magnitude and timescale of the amplitude variations are discussed, along with the presence or absence ofmore » correlations between amplitude variations for different frequencies of a given star. Proposed causes of amplitude spectrum variability that will require further investigation are also discussed.« less

Integrated filter and detector array for spectral imaging

NASA Technical Reports Server (NTRS)

Labaw, Clayton C. (Inventor)

1992-01-01

A spectral imaging system having an integrated filter and photodetector array is disclosed. The filter has narrow transmission bands which vary in frequency along the photodetector array. The frequency variation of the transmission bands is matched to, and aligned with, the frequency variation of a received spectral image. The filter is deposited directly on the photodetector array by a low temperature deposition process. By depositing the filter directly on the photodetector array, permanent alignment is achieved for all temperatures, spectral crosstalk is substantially eliminated, and a high signal to noise ratio is achieved.

Inherited differences in crossing over and gene conversion frequencies between wild strains of Sordaria fimicola from "Evolution Canyon".

PubMed Central

Saleem, M; Lamb, B C; Nevo, E

2001-01-01

Recombination generates new combinations of existing genetic variation and therefore may be important in adaptation and evolution. We investigated whether there was natural genetic variation for recombination frequencies and whether any such variation was environment related and possibly adaptive. Crossing over and gene conversion frequencies often differed significantly in a consistent direction between wild strains of the fungus Sordaria fimicola isolated from a harsher or a milder microscale environment in "Evolution Canyon," Israel. First- and second-generation descendants from selfing the original strains from the harsher, more variable, south-facing slope had higher frequencies of crossing over in locus-centromere intervals and of gene conversion than those from the lusher north-facing slopes. There were some significant differences between strains within slopes, but these were less marked than between slopes. Such inherited variation could provide a basis for natural selection for optimum recombination frequencies in each environment. There were no significant differences in meiotic hybrid DNA correction frequencies between strains from the different slopes. The conversion analysis was made using only conversions to wild type, because estimations of conversion to mutant were affected by a high frequency of spontaneous mutation. There was no polarized segregation of chromosomes at meiosis I or of chromatids at meiosis II. PMID:11779798

Inherited differences in crossing over and gene conversion frequencies between wild strains of Sordaria fimicola from "Evolution Canyon".

PubMed

Saleem, M; Lamb, B C; Nevo, E

2001-12-01

Recombination generates new combinations of existing genetic variation and therefore may be important in adaptation and evolution. We investigated whether there was natural genetic variation for recombination frequencies and whether any such variation was environment related and possibly adaptive. Crossing over and gene conversion frequencies often differed significantly in a consistent direction between wild strains of the fungus Sordaria fimicola isolated from a harsher or a milder microscale environment in "Evolution Canyon," Israel. First- and second-generation descendants from selfing the original strains from the harsher, more variable, south-facing slope had higher frequencies of crossing over in locus-centromere intervals and of gene conversion than those from the lusher north-facing slopes. There were some significant differences between strains within slopes, but these were less marked than between slopes. Such inherited variation could provide a basis for natural selection for optimum recombination frequencies in each environment. There were no significant differences in meiotic hybrid DNA correction frequencies between strains from the different slopes. The conversion analysis was made using only conversions to wild type, because estimations of conversion to mutant were affected by a high frequency of spontaneous mutation. There was no polarized segregation of chromosomes at meiosis I or of chromatids at meiosis II.

Direct and correlated responses to artificial selection on male mating frequency in the stalk-eyed fly Cyrtodiopsis dalmanni.

PubMed

Rogers, D W; Baker, R H; Chapman, T; Denniff, M; Pomiankowski, A; Fowler, K

2005-05-01

Traditionally it was thought that fitness-related traits such as male mating frequency, with a history of strong directional selection, should have little additive genetic variance and thus respond asymmetrically to bidirectional artificial selection. However, recent findings and theory suggest that a balance between selection for increased male mating frequency and opposing selection pressures on physiologically linked traits will cause male mating frequency to have high additive genetic variation and hence respond symmetrically to selection. We tested these hypotheses in the stalk-eyed fly, Cyrtodiopsis dalmanni, in which males hold harems comprising many females and so have the opportunity to mate at extremely high frequencies. We subjected male stalk-eyed flies to artificial selection for increased ('high') and decreased ('low') mating frequency in the presence of ecologically realistic, high numbers of females. High line males mated significantly more often than control or low line males. The direct response to selection was approximately symmetric in the high and low lines, revealing high additive genetic variation for, and no significant genetic constraints on, increased male mating frequency in C. dalmanni. In order to investigate trade-offs that might constrain male mating frequency under natural conditions we examined correlated responses to artificial selection. We measured accessory gland length, testis length and eyespan after 7 and 14 generations of selection. High line males had significantly larger accessory glands than low line males. No consistent correlated responses to selection were found in testis length or eyespan. Our results suggest that costs associated with the production and maintenance of large accessory glands, although yet to be identified, are likely to be a major constraint on mating frequency in natural populations of C. dalmanni.

Solar Influences on the Return Direction of High-Frequency Radar Backscatter

NASA Astrophysics Data System (ADS)

Burrell, Angeline G.; Perry, Gareth W.; Yeoman, Timothy K.; Milan, Stephen E.; Stoneback, Russell

2018-04-01

Coherent-scatter, high-frequency, phased-array radars create narrow beams through the use of constructive and destructive interference patterns. This formation method leads to the creation of a secondary beam, or lobe, that is sent out behind the radar. This study investigates the relative importance of the beams in front of and behind the high-frequency radar located in Hankasalmi, Finland, using observations taken over a solar cycle, as well as coincident observations from Hankasalmi and the Enhanced Polar Outflow Probe Radio Receiver Instrument. These observations show that the relative strength of the front and rear beams is frequency dependent, with the relative amount of power sent to the front lobe increasing with increasing frequency. At the range of frequencies used by Hankasalmi, both front and rear beams are always present, though the main beam is always stronger than the rear lobe. Because signals are always transmitted to the front and rear of the radar, it is always possible to receive backscatter from both return directions. Examining the return direction as a function of local time, season, and solar cycle shows that the dominant return direction depends primarily on the local ionospheric structure. Diurnal changes in plasma density typically cause an increase in the amount of groundscatter returning from the rear lobe at night, though the strength of this variation has a seasonal dependence. Solar cycle variations are also seen in the groundscatter return direction, modifying the existing local time and seasonal variations.

High Frequency Variations of Earth Rotation Parameters from GPS and GLONASS Observations

PubMed Central

Wei, Erhu; Jin, Shuanggen; Wan, Lihua; Liu, Wenjie; Yang, Yali; Hu, Zhenghong

2015-01-01

The Earth's rotation undergoes changes with the influence of geophysical factors, such as Earth's surface fluid mass redistribution of the atmosphere, ocean and hydrology. However, variations of Earth Rotation Parameters (ERP) are still not well understood, particularly the short-period variations (e.g., diurnal and semi-diurnal variations) and their causes. In this paper, the hourly time series of Earth Rotation Parameters are estimated using Global Positioning System (GPS), Global Navigation Satellite System (GLONASS), and combining GPS and GLONASS data collected from nearly 80 sites from 1 November 2012 to 10 April 2014. These new observations with combining different satellite systems can help to decorrelate orbit biases and ERP, which improve estimation of ERP. The high frequency variations of ERP are analyzed using a de-trending method. The maximum of total diurnal and semidiurnal variations are within one milli-arcseconds (mas) in Polar Motion (PM) and 0.5 milli-seconds (ms) in UT1-UTC. The semidiurnal and diurnal variations are mainly related to the ocean tides. Furthermore, the impacts of satellite orbit and time interval used to determinate ERP on the amplitudes of tidal terms are analyzed. We obtain some small terms that are not described in the ocean tide model of the IERS Conventions 2010, which may be caused by the strategies and models we used or the signal noises as well as artifacts. In addition, there are also small differences on the amplitudes between our results and IERS convention. This might be a result of other geophysical excitations, such as the high-frequency variations in atmospheric angular momentum (AAM) and hydrological angular momentum (HAM), which needs more detailed analysis with more geophysical data in the future. PMID:25635416

Gentamicin differentially alters cellular metabolism of cochlear hair cells as revealed by NAD(P)H fluorescence lifetime imaging

NASA Astrophysics Data System (ADS)

Zholudeva, Lyandysha V.; Ward, Kristina G.; Nichols, Michael G.; Smith, Heather Jensen

2015-05-01

Aminoglycoside antibiotics are implicated as culprits of hearing loss in more than 120,000 individuals annually. Research has shown that the sensory cells, but not supporting cells, of the cochlea are readily damaged and/or lost after use of such antibiotics. High-frequency outer hair cells (OHCs) show a greater sensitivity to antibiotics than high- and low-frequency inner hair cells (IHCs). We hypothesize that variations in mitochondrial metabolism account for differences in susceptibility. Fluorescence lifetime microscopy was used to quantify changes in NAD(P)H in sensory and supporting cells from explanted murine cochleae exposed to mitochondrial uncouplers, inhibitors, and an ototoxic antibiotic, gentamicin (GM). Changes in metabolic state resulted in a redistribution of NAD(P)H between subcellular fluorescence lifetime pools. Supporting cells had a significantly longer lifetime than sensory cells. Pretreatment with GM increased NAD(P)H intensity in high-frequency sensory cells, as well as the NAD(P)H lifetime within IHCs. GM specifically increased NAD(P)H concentration in high-frequency OHCs, but not in IHCs or pillar cells. Variations in NAD(P)H intensity in response to mitochondrial toxins and GM were greatest in high-frequency OHCs. These results demonstrate that GM rapidly alters mitochondrial metabolism, differentially modulates cell metabolism, and provides evidence that GM-induced changes in metabolism are significant and greatest in high-frequency OHCs.

Gentamicin differentially alters cellular metabolism of cochlear hair cells as revealed by NAD(P)H fluorescence lifetime imaging

PubMed Central

Zholudeva, Lyandysha V.; Ward, Kristina G.; Nichols, Michael G.; Smith, Heather Jensen

2015-01-01

Abstract. Aminoglycoside antibiotics are implicated as culprits of hearing loss in more than 120,000 individuals annually. Research has shown that the sensory cells, but not supporting cells, of the cochlea are readily damaged and/or lost after use of such antibiotics. High-frequency outer hair cells (OHCs) show a greater sensitivity to antibiotics than high- and low-frequency inner hair cells (IHCs). We hypothesize that variations in mitochondrial metabolism account for differences in susceptibility. Fluorescence lifetime microscopy was used to quantify changes in NAD(P)H in sensory and supporting cells from explanted murine cochleae exposed to mitochondrial uncouplers, inhibitors, and an ototoxic antibiotic, gentamicin (GM). Changes in metabolic state resulted in a redistribution of NAD(P)H between subcellular fluorescence lifetime pools. Supporting cells had a significantly longer lifetime than sensory cells. Pretreatment with GM increased NAD(P)H intensity in high-frequency sensory cells, as well as the NAD(P)H lifetime within IHCs. GM specifically increased NAD(P)H concentration in high-frequency OHCs, but not in IHCs or pillar cells. Variations in NAD(P)H intensity in response to mitochondrial toxins and GM were greatest in high-frequency OHCs. These results demonstrate that GM rapidly alters mitochondrial metabolism, differentially modulates cell metabolism, and provides evidence that GM-induced changes in metabolism are significant and greatest in high-frequency OHCs. PMID:25688541

Maternal investment in reproduction and its consequences in leatherback turtles.

PubMed

Wallace, Bryan P; Sotherland, Paul R; Tomillo, Pilar Santidrian; Reina, Richard D; Spotila, James R; Paladino, Frank V

2007-05-01

Maternal investment in reproduction by oviparous non-avian reptiles is usually limited to pre-ovipositional allocations to the number and size of eggs and clutches, thus making these species good subjects for testing hypotheses of reproductive optimality models. Because leatherback turtles (Dermochelys coriacea) stand out among oviparous amniotes by having the highest clutch frequency and producing the largest mass of eggs per reproductive season, we quantified maternal investment of 146 female leatherbacks over four nesting seasons (2001-2004) and found high inter- and intra-female variation in several reproductive characteristics. Estimated clutch frequency [coefficient of variation (CV) = 31%] and clutch size (CV = 26%) varied more among females than did egg mass (CV = 9%) and hatchling mass (CV = 7%). Moreover, clutch size had an approximately threefold higher effect on clutch mass than did egg mass. These results generally support predictions of reproductive optimality models in which species that lay several, large clutches per reproductive season should exhibit low variation in egg size and instead maximize egg number (clutch frequency and/or size). The number of hatchlings emerging per nest was positively correlated with clutch size, but fraction of eggs in a clutch yielding hatchlings (emergence success) was not correlated with clutch size and varied highly among females. In addition, seasonal fecundity and seasonal hatchling production increased with the frequency and the size of clutches (in order of effect size). Our results demonstrate that female leatherbacks exhibit high phenotypic variation in reproductive traits, possibly in response to environmental variability and/or resulting from genotypic variability within the population. Furthermore, high seasonal and lifetime fecundity of leatherbacks probably reflect compensation for high and unpredictable mortality during early life history stages in this species.

Chaos in a chemical system

NASA Astrophysics Data System (ADS)

Srivastava, R.; Srivastava, P. K.; Chattopadhyay, J.

2013-07-01

Chaotic oscillations have been observed experimentally in dual-frequency oscillator OAP - Ce+4-BrO- 3-H2SO4 in CSTR. The system shows variation of oscillating potential and frequencies when it moves from low frequency to high frequency region and vice-versa. It was observed that system bifurcate from low frequency to chaotic regime through periode-2 and period-3 on the other hand system bifurcate from chaotic regime to high frequency oscillation through period-2. It was established that the observed oscillations are chaotic in nature on the basis of next amplitude map and bifurcation sequences.

Formant-frequency variation and its effects on across-formant grouping in speech perception.

PubMed

Roberts, Brian; Summers, Robert J; Bailey, Peter J

2013-01-01

How speech is separated perceptually from other speech remains poorly understood. In a series of experiments, perceptual organisation was probed by presenting three-formant (F1+F2+F3) analogues of target sentences dichotically, together with a competitor for F2 (F2C), or for F2+F3, which listeners must reject to optimise recognition. To control for energetic masking, the competitor was always presented in the opposite ear to the corresponding target formant(s). Sine-wave speech was used initially, and different versions of F2C were derived from F2 using separate manipulations of its amplitude and frequency contours. F2Cs with time-varying frequency contours were highly effective competitors, whatever their amplitude characteristics, whereas constant-frequency F2Cs were ineffective. Subsequent studies used synthetic-formant speech to explore the effects of manipulating the rate and depth of formant-frequency change in the competitor. Competitor efficacy was not tuned to the rate of formant-frequency variation in the target sentences; rather, the reduction in intelligibility increased with competitor rate relative to the rate for the target sentences. Therefore, differences in speech rate may not be a useful cue for separating the speech of concurrent talkers. Effects of competitors whose depth of formant-frequency variation was scaled by a range of factors were explored using competitors derived either by inverting the frequency contour of F2 about its geometric mean (plausibly speech-like pattern) or by using a regular and arbitrary frequency contour (triangle wave, not plausibly speech-like) matched to the average rate and depth of variation for the inverted F2C. Competitor efficacy depended on the overall depth of frequency variation, not depth relative to that for the other formants. Furthermore, the triangle-wave competitors were as effective as their more speech-like counterparts. Overall, the results suggest that formant-frequency variation is critical for the across-frequency grouping of formants but that this grouping does not depend on speech-specific constraints.

STEREO observations of HD90386 (RX Sex): a δ-Scuti or a hybrid star?

NASA Astrophysics Data System (ADS)

Ozuyar, D.; Stevens, I. R.; Whittaker, G.; Sangaralingam, V.

2016-04-01

HD90386 is a rarely studied bright A2V type δ Scuti star (V = 6.66 mag). It displays short-term light curve variations which are originated due to either a beating phenomenon or a non-periodic variation. In this paper, we presented high-precision photometric data of HD90386 taken by the STEREO satellite between 2007 and 2011 to shed light on its internal structure and evolution stage. From the frequency analysis of the four-year data, we detected that HD90386 had at least six different frequencies between 1 and 15 c d-1. The most dominant frequencies were found at around 10.25258 c d-1 (A ∼ 1.92 mmag) and 12.40076 c d-1 (A ∼ 0.61 mmag). Based on the ratio between these frequencies, the star was considered as an overtone pulsator. The variation in pulsation period over 35 years was calculated to be dP/Pdt = 5.39(2) x 10-3 yr-1. Other variabilities at around 1.0 c d-1 in the amplitude spectrum of HD90386 were also discussed. In order to explain these variabilities, possible rotational effects and γ Dor type variations were focused. Consequently, depending on the rotation velocity of HD90386, we speculated that these changes might be related to γ Dor type high-order g-modes shifted to the higher frequencies and that HD90386 might be a hybrid star.

Project of a laser gyroscope to determine continuously the Earth's rotation.

NASA Astrophysics Data System (ADS)

Blinov, N. S.; Zharov, V. E.; Sazhin, M. V.; Fedoseev, E. N.; Vlasov, B. I.; Rusakov, V. K.

The Time Service of the Sternberg State Astronomical Institute together with specialists of VNIIFTRI began to work at the project of the laser gyroscope to determine continuously the Earth's rotation. It is assumed to measure both the high-frequency variations with periods of 100 - 1000 sec and the low-frequency variations with periods of a few days. It gives the opportunity to combine these data with the VLBI data.

False Operation of Static Random Access Memory Cells under Alternating Current Power Supply Voltage Variation

NASA Astrophysics Data System (ADS)

Sawada, Takuya; Takata, Hidehiro; Nii, Koji; Nagata, Makoto

2013-04-01

Static random access memory (SRAM) cores exhibit susceptibility against power supply voltage variation. False operation is investigated among SRAM cells under sinusoidal voltage variation on power lines introduced by direct RF power injection. A standard SRAM core of 16 kbyte in a 90 nm 1.5 V technology is diagnosed with built-in self test and on-die noise monitor techniques. The sensitivity of bit error rate is shown to be high against the frequency of injected voltage variation, while it is not greatly influenced by the difference in frequency and phase against SRAM clocking. It is also observed that the distribution of false bits is substantially random in a cell array.

Phase control of a Zeeman-split He-Ne gas laser by variation of the gaseous discharge voltage.

PubMed

Shelton, W N; Hunt, R H

1992-07-20

Zeeman-split lasers are useful for precise positioning or motion control. In applications that employ such a laser to control closely the position of a moving system, phase noise in the Zeeman frequency is a serious problem. Control of low-frequency phase noise can be obtained through variation of the external magnetic field by way of a solenoid wound around the laser tube. It is the finding in this work that control of the residual higher-frequency noise of a He-Ne laser can be obtained through small variations of the high voltage that is used to effect the gaseous discharge in the laser tube. The application of the present system is to the control of the path difference in a Fourier-transform interferometric spectrometer.

Use of global ionospheric maps for HF Doppler measurements interpretation

NASA Astrophysics Data System (ADS)

Petrova, I. R.; Bochkarev, V. V.; Latypov, R. R.

2018-04-01

The HF Doppler technique, a method of measurement of Doppler frequency shift of ionospheric signal, is one of the well-known and widely used techniques of ionosphere research. It allows investigation of various disturbances in the ionosphere. There are different sources of disturbances in the ionosphere such as geomagnetic storms, solar flashes, meteorological effects and atmospheric waves. The HF Doppler technique allows us to find out the influence of earthquakes, explosions and other processes on the ionosphere, which occurs near the Earth. HF Doppler technique has high sensitivity to small frequency variations and high time resolution but interpretation of results is difficult. In this paper, we attempt to use GPS data for Doppler measurements interpretation. Modeling of Doppler frequency shift variations with use of TEC allows separation of ionosphere disturbances of medium scale.

The effects of temporal variability of mixed layer depth on primary productivity around Bermuda

NASA Technical Reports Server (NTRS)

Bissett, W. Paul; Meyers, Mark B.; Walsh, John J.; Mueller-Karger, Frank E.

1994-01-01

Temporal variations in primary production and surface chlorophyll concentrations, as measured by ship and satellite around Bermuda, were simulated with a numerical model. In the upper 450 m of the water column, population dynamics of a size-fractionated phytoplankton community were forced by daily changes of wind, light, grazing stress, and nutrient availability. The temporal variations of production and chlorophyll were driven by changes in nutrient introduction to the euphotic zone due to both high- and low-frequency changes of the mixed layer depth within 32 deg-34 deg N, 62 deg-64 deg W between 1979 and 1984. Results from the model derived from high-frequency (case 1) changes in the mixed layer depth showed variations in primary production and peak chlorophyll concentrations when compared with results from the model derived from low-frequency (case 2) mixed layer depth changes. Incorporation of size-fractionated plankton state variables in the model led to greater seasonal resolution of measured primary production and vertical chlorophyll profiles. The findings of this study highlight the possible inadequacy of estimating primary production in the sea from data of low-frequency temporal resolution and oversimplified biological simulations.

Analysis of dispersion and attenuation of surface waves in poroelastic media in the exploration-seismic frequency band

USGS Publications Warehouse

Zhang, Y.; Xu, Y.; Xia, J.

2011-01-01

We analyse dispersion and attenuation of surface waves at free surfaces of possible vacuum/poroelastic media: permeable-'open pore', impermeable-'closed pore' and partially permeable boundaries, which have not been previously reported in detail by researchers, under different surface-permeable, viscous-damping, elastic and fluid-flowing conditions. Our discussion is focused on their characteristics in the exploration-seismic frequency band (a few through 200 Hz) for near-surface applications. We find two surface-wave modes exist, R1 waves for all conditions, and R2 waves for closed-pore and partially permeable conditions. For R1 waves, velocities disperse most under partially permeable conditions and least under the open-pore condition. High-coupling damping coefficients move the main dispersion frequency range to high frequencies. There is an f1 frequency dependence as a constant-Q model for attenuation at high frequencies. R1 waves for the open pore are most sensitive to elastic modulus variation, but least sensitive to tortuosities variation. R1 waves for partially permeable surface radiate as non-physical waves (Im(k) < 0) at low frequencies. For R2 waves, velocities are slightly lower than the bulk slow P2 waves. At low frequencies, both velocity and attenuation are diffusive of f1/2 frequency dependence, as P2 waves. It is found that for partially permeable surfaces, the attenuation displays -f1 frequency dependence as frequency increasing. High surface permeability, low-coupling damping coefficients, low Poisson's ratios, and low tortuosities increase the slope of the -f1 dependence. When the attenuation coefficients reach 0, R2 waves for partially permeable surface begin to radiate as non-physical waves. ?? 2011 The Authors Geophysical Journal International ?? 2011 RAS.

Altitude and intensity characteristics of parametric instability excited by an HF pump wave near the fifth electron harmonic

NASA Astrophysics Data System (ADS)

Jun, WU; Jian, WU; M, T. RIETVELD; I, HAGGSTROM; Haisheng, ZHAO; Zhengwen, XU

2017-12-01

An ionospheric heating experiment involving an O mode pump wave was carried out at European Incoherent Scatter Scientific Association site in Tromsø. The observation of the ultra high frequency radar illustrates the systematic variations of the enhanced ion line and plasma line in altitude and intensity as a function of the pump frequency. The analysis shows that those altitude variations are due to the thermal effect, and the intensity variations of the enhanced ion line are dependent on whether or not the enhanced ion acoustic wave satisfy the Bragg condition of radar. Moreover, a prediction that if the enhancement in electron temperature is suppressed, those systematic variations will be absent, is given.

Intraspecific variation in flight metabolic rate in the bumblebee Bombus impatiens: repeatability and functional determinants in workers and drones.

PubMed

Darveau, Charles-A; Billardon, Fannie; Bélanger, Kasandra

2014-02-15

The evolution of flight energetics requires that phenotypes be variable, repeatable and heritable. We studied intraspecific variation in flight energetics in order to assess the repeatability of flight metabolic rate and wingbeat frequency, as well as the functional basis of phenotypic variation in workers and drones of the bumblebee species Bombus impatiens. We showed that flight metabolic rate and wingbeat frequency were highly repeatable in workers, even when controlling for body mass variation using residual analysis. We did not detect significant repeatability in drones, but a smaller range of variation might have prevented us from finding significant values in our sample. Based on our results and previous findings, we associated the high repeatability of flight phenotypes in workers to the functional links between body mass, thorax mass, wing size, wingbeat frequency and metabolic rate. Moreover, differences between workers and drones were as predicted from these functional associations, where drones had larger wings for their size, lower wingbeat frequency and lower flight metabolic rate. We also investigated thoracic muscle metabolic phenotypes by measuring the activity of carbohydrate metabolism enzymes, and we found positive correlations between mass-independent metabolic rate and the activity of all enzymes measured, but in workers only. When comparing workers and drones that differ in flight metabolic rate, only the activity of the enzymes hexokinase and trehalase showed the predicted differences. Overall, our study indicates that there should be correlated evolution among physiological phenotypes at multiple levels of organization and morphological traits associated with flight.

Relations among low ionosphere parameters and high frequency radio wave absorption

NASA Technical Reports Server (NTRS)

Cipriano, J. P.

1973-01-01

Charged particle conductivities measured in the very low ionosphere at White Sands Missile Range, New Mexico, and Wallops Island, Virginia, are compared with atmospheric parameters and high frequency radio wave absorption measurements. Charged particle densities are derived from the conductivity data. Between 33 and 58 km, positive conductivity correlated well with neutral atmospheric temperature, with temperature coefficients as large as 4.6%/deg K. Good correlations were also found between HF radio wave absorption and negative conductivity at altitudes as low as 53 km, indicating that the day-to-day absorption variations were principally due to variations in electron loss rate.

External and middle ear sound pressure distribution and acoustic coupling to the tympanic membrane

PubMed Central

Bergevin, Christopher; Olson, Elizabeth S.

2014-01-01

Sound energy is conveyed to the inner ear by the diaphanous, cone-shaped tympanic membrane (TM). The TM moves in a complex manner and transmits sound signals to the inner ear with high fidelity, pressure gain, and a short delay. Miniaturized sensors allowing high spatial resolution in small spaces and sensitivity to high frequencies were used to explore how pressure drives the TM. Salient findings are: (1) A substantial pressure drop exists across the TM, and varies in frequency from ∼10 to 30 dB. It thus appears reasonable to approximate the drive to the TM as being defined solely by the pressure in the ear canal (EC) close to the TM. (2) Within the middle ear cavity (MEC), spatial variations in sound pressure could vary by more than 20 dB, and the MEC pressure at certain locations/frequencies was as large as in the EC. (3) Spatial variations in pressure along the TM surface on the EC-side were typically less than 5 dB up to 50 kHz. Larger surface variations were observed on the MEC-side. PMID:24606269

A Wide Band Absorbing Material Design Using Band-Pass Frequency Selective Surface

NASA Astrophysics Data System (ADS)

Xu, Yonggang; Xu, Qiang; Liu, Ting; Zheng, Dianliang; Zhou, Li

2018-03-01

Based on the high frequency advantage characteristics of the Fe based absorbing coating, a method for designing the structure of broadband absorbing structure by using frequency selective surface (FSS) is proposed. According to the transmission and reflection characteristic of the different size FSS structure, the frequency variation characteristic was simulated. Secondly, the genetic algorithm was used to optimize the high frequency broadband absorbing materials, including the single and double magnetic layer material. Finally, the absorbing characteristics in iron layer were analyzed as the band pass FSS structure was embedded, the results showed that the band-pass FSS had the influence on widening the absorbing frequency. As the FSS was set as the bottom layer, it was effective to achieve the good absorbing property in low frequency and the high frequency absorbing performance was not weakened, because the band-pass FSS led the low frequency absorption and the high frequency shielding effect. The results of this paper are of guiding significance for designing and manufacturing the broadband absorbing materials.

Improved Kennedy-Thorndike experiment to test special relativity

NASA Technical Reports Server (NTRS)

Hils, Dieter; Hall, J. L.

1990-01-01

A modern version of the Kennedy-Thorndike experiment was carried out by searching for sidereal variations between the frequency of a laser locked to an I2 reference line and a laser locked to the resonance frequency of a highly stable cavity. No variations were found at the level of 2 x 10 to the -12th. This represents a 300-fold improvement over the original Kennedy-Thorndike experiment and allows the Lorentz transformations to be deduced entirely from experiment at an accuracy level of 70 ppm.

Improved Kennedy-Thorndike experiment to test special relativity

NASA Astrophysics Data System (ADS)

Hils, Dieter; Hall, J. L.

1990-04-01

A modern version of the Kennedy-Thorndike experiment was carried out by searching for sidereal variations between the frequency of a laser locked to an I2 reference line and a laser locked to the resonance frequency of a highly stable cavity. No variations were found at the level of 2 x 10 to the -12th. This represents a 300-fold improvement over the original Kennedy-Thorndike experiment and allows the Lorentz transformations to be deduced entirely from experiment at an accuracy level of 70 ppm.

Coupled analysis of high and low frequency resonant ultrasound spectroscopy: Application to the detection of defects in ceramic balls

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deneuville, Francois; Duquennoy, Marc; Ouaftouh, Mohammadi

2009-05-15

A coupled analysis of high and low frequency resonant ultrasound spectroscopy of spheroidal modes is presented in this paper. Experimentally, by using an ultrasonic probe for the excitation (piezoelectric transducer) and a heterodyne optic probe for the receiver (interferometer), it was possible to take spectroscopic measurements of spheroidal vibrations over a large frequency range of 100 kHz-45 MHz in a continuous regime. This wide analysis range enabled variations in velocity due to the presence of defects to be differentiated from the inherent characteristics of the balls and consequently, it offers the possibility of detecting cracks independently of production variations. Thismore » kind of defect is difficult to detect because the C-shaped surface crack is very small and narrow (500x5 {mu}m{sup 2}), and its depth does not exceed 50 {mu}m. The proposed methodology can excite spheroidal vibrations in the ceramic balls and detect such vibrations over a large frequency range. On the one hand, low frequency resonances are used in order to estimate the elastic coefficients of the balls according to various inspection depths. This method has the advantage of providing highly accurate evaluations of the elastic coefficients over a wide frequency range. On the other hand, high frequency vibrations are considered because they are similar to the surface waves propagating in the surface zone of the ceramic balls and consequently can be used to detect C-crack defects.« less

Three filters for visualization of phase objects with large variations of phase gradients

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sagan, Arkadiusz; Antosiewicz, Tomasz J.; Szoplik, Tomasz

2009-02-20

We propose three amplitude filters for visualization of phase objects. They interact with the spectra of pure-phase objects in the frequency plane and are based on tangent and error functions as well as antisymmetric combination of square roots. The error function is a normalized form of the Gaussian function. The antisymmetric square-root filter is composed of two square-root filters to widen its spatial frequency spectral range. Their advantage over other known amplitude frequency-domain filters, such as linear or square-root graded ones, is that they allow high-contrast visualization of objects with large variations of phase gradients.

Process Inference from High Frequency Temporal Variations in Dissolved Organic Carbon (DOC) Dynamics Across Nested Spatial Scales

NASA Astrophysics Data System (ADS)

Tunaley, C.; Tetzlaff, D.; Lessels, J. S.; Soulsby, C.

2014-12-01

In order to understand aquatic ecosystem functioning it is critical to understand the processes that control the spatial and temporal variations in DOC. DOC concentrations are highly dynamic, however, our understanding at short, high frequency timescales is still limited. Optical sensors which act as a proxy for DOC provide the opportunity to investigate near-continuous DOC variations in order to understand the hydrological and biogeochemical processes that control concentrations at short temporal scales. Here we present inferred 15 minute stream water DOC data for a 12 month period at three nested scales (1km2, 3km2 and 31km2) for the Bruntland Burn, a headwater catchment in NE Scotland. High frequency data were measured using FDOM and CDOM probes which work by measuring the fluorescent component and coloured component, respectively, of DOC when exposed to ultraviolet light. Both FDOM and CDOM were strongly correlated (r2 >0.8) with DOC allowing high frequency estimations. Results show the close coupling of DOC with discharge throughout the sampling period at all three spatial scales. However, analysis at the event scale highlights anticlockwise hysteresis relationships between DOC and discharge due to the delay in DOC being flushed from the increasingly large areas of peaty soils as saturation zones expand and increase hydrological connectivity. Lag times vary between events dependent on antecedent conditions. During a 10 year drought period in late summer 2013 it was apparent that very small changes in discharge on a 15 minute timescale result in high increases in DOC. This suggests transport limitation during this period where DOC builds up in the soil and is not flushed regularly, therefore any subsequent increase in discharge results in large DOC peaks. The high frequency sensors also reveal diurnal variability during summer months related to the photo-oxidation, evaporative and biological influences of DOC during the day. This relationship is less significant during the winter months.

Variation in Student Skipping: A Study of Six High Schools. Final Report.

ERIC Educational Resources Information Center

Duckworth, Kenneth; deJung, John

Data were obtained from six high schools in the Northwest during 1984 and 1985 to determine the variation in students' reports of the frequency with which they skip school and cut classes. The study was guided by the advice of school administrators and a theoretical model of the influences or levels of participation in work organizations. Evidence…

A phase coherence approach to estimating the spatial extent of earthquakes

NASA Astrophysics Data System (ADS)

Hawthorne, Jessica C.; Ampuero, Jean-Paul

2016-04-01

We present a new method for estimating the spatial extent of seismic sources. The approach takes advantage of an inter-station phase coherence computation that can identify co-located sources (Hawthorne and Ampuero, 2014). Here, however, we note that the phase coherence calculation can eliminate the Green's function and give high values only if both earthquakes are point sources---if their dimensions are much smaller than the wavelengths of the propagating seismic waves. By examining the decrease in coherence at higher frequencies (shorter wavelengths), we can estimate the spatial extents of the earthquake ruptures. The approach can to some extent be seen as a simple way of identifying directivity or variations in the apparent source time functions recorded at various stations. We apply this method to a set of well-recorded earthquakes near Parkfield, CA. We show that when the signal to noise ratio is high, the phase coherence remains high well above 50 Hz for closely spaced M<1.5 earthquake. The high-frequency phase coherence is smaller for larger earthquakes, suggesting larger spatial extents. The implied radii scale roughly as expected from typical magnitude-corner frequency scalings. We also examine a second source of high-frequency decoherence: spatial variation in the shape of the Green's functions. This spatial decoherence appears to occur on a similar wavelengths as the decoherence associated with the apparent source time functions. However, the variation in Green's functions can be normalized away to some extent by comparing observations at multiple components on a single station, which see the same apparent source time functions.

Empirical Distributions of F ST from Large-Scale Human Polymorphism Data

PubMed Central

Elhaik, Eran

2012-01-01

Studies of the apportionment of human genetic variation have long established that most human variation is within population groups and that the additional variation between population groups is small but greatest when comparing different continental populations. These studies often used Wright’s F ST that apportions the standardized variance in allele frequencies within and between population groups. Because local adaptations increase population differentiation, high-F ST may be found at closely linked loci under selection and used to identify genes undergoing directional or heterotic selection. We re-examined these processes using HapMap data. We analyzed 3 million SNPs on 602 samples from eight worldwide populations and a consensus subset of 1 million SNPs found in all populations. We identified four major features of the data: First, a hierarchically F ST analysis showed that only a paucity (12%) of the total genetic variation is distributed between continental populations and even a lesser genetic variation (1%) is found between intra-continental populations. Second, the global F ST distribution closely follows an exponential distribution. Third, although the overall F ST distribution is similarly shaped (inverse J), F ST distributions varies markedly by allele frequency when divided into non-overlapping groups by allele frequency range. Because the mean allele frequency is a crude indicator of allele age, these distributions mark the time-dependent change in genetic differentiation. Finally, the change in mean-F ST of these groups is linear in allele frequency. These results suggest that investigating the extremes of the F ST distribution for each allele frequency group is more efficient for detecting selection. Consequently, we demonstrate that such extreme SNPs are more clustered along the chromosomes than expected from linkage disequilibrium for each allele frequency group. These genomic regions are therefore likely candidates for natural selection. PMID:23185452

Empirical distributions of F(ST) from large-scale human polymorphism data.

PubMed

Elhaik, Eran

2012-01-01

Studies of the apportionment of human genetic variation have long established that most human variation is within population groups and that the additional variation between population groups is small but greatest when comparing different continental populations. These studies often used Wright's F(ST) that apportions the standardized variance in allele frequencies within and between population groups. Because local adaptations increase population differentiation, high-F(ST) may be found at closely linked loci under selection and used to identify genes undergoing directional or heterotic selection. We re-examined these processes using HapMap data. We analyzed 3 million SNPs on 602 samples from eight worldwide populations and a consensus subset of 1 million SNPs found in all populations. We identified four major features of the data: First, a hierarchically F(ST) analysis showed that only a paucity (12%) of the total genetic variation is distributed between continental populations and even a lesser genetic variation (1%) is found between intra-continental populations. Second, the global F(ST) distribution closely follows an exponential distribution. Third, although the overall F(ST) distribution is similarly shaped (inverse J), F(ST) distributions varies markedly by allele frequency when divided into non-overlapping groups by allele frequency range. Because the mean allele frequency is a crude indicator of allele age, these distributions mark the time-dependent change in genetic differentiation. Finally, the change in mean-F(ST) of these groups is linear in allele frequency. These results suggest that investigating the extremes of the F(ST) distribution for each allele frequency group is more efficient for detecting selection. Consequently, we demonstrate that such extreme SNPs are more clustered along the chromosomes than expected from linkage disequilibrium for each allele frequency group. These genomic regions are therefore likely candidates for natural selection.

There's More to Groove than Bass in Electronic Dance Music: Why Some People Won't Dance to Techno.

PubMed

Wesolowski, Brian C; Hofmann, Alex

2016-01-01

The purpose of this study was to explore the relationship between audio descriptors for groove-based electronic dance music (EDM) and raters' perceived cognitive, affective, and psychomotor responses. From 198 musical excerpts (length: 15 sec.) representing 11 subgenres of EDM, 19 low-level audio feature descriptors were extracted. A principal component analysis of the feature vectors indicated that the musical excerpts could effectively be classified using five complex measures, describing the rhythmical properties of: (a) the high-frequency band, (b) the mid-frequency band, and (c) the low-frequency band, as well as overall fluctuations in (d) dynamics, and (e) timbres. Using these five complex audio measures, four meaningful clusters of the EDM excerpts emerged with distinct musical attributes comprising music with: (a) isochronous bass and static timbres, (b) isochronous bass with fluctuating dynamics and rhythmical variations in the mid-frequency range, (c) non-isochronous bass and fluctuating timbres, and (d) non-isochronous bass with rhythmical variations in the high frequencies. Raters (N = 99) were each asked to respond to four musical excerpts using a four point Likert-Type scale consisting of items representing cognitive (n = 9), affective (n = 9), and psychomotor (n = 3) domains. Musical excerpts falling under the cluster of "non-isochronous bass with rhythmical variations in the high frequencies" demonstrated the overall highest composite scores as evaluated by the raters. Musical samples falling under the cluster of "isochronous bass with static timbres" demonstrated the overall lowest composite scores as evaluated by the raters. Moreover, music preference was shown to significantly affect the systematic patterning of raters' responses for those with a musical preference for "contemporary" music, "sophisticated" music, and "intense" music.

Invariants of electromechanical coupling coefficients in piezoceramics.

PubMed

Mezheritsky, Alex V

2003-12-01

The relationships between coefficients of electromechanical coupling (CEMC) of various types of piezoceramic resonator (PR) vibrations are considered. Being constant for a given piezoceramic state, the range of variation of piezoceramics dielectric permittivity from a mechanically "free" condition at relatively low frequencies up to an "overall clamped" condition at high frequencies is determined by a consecutive "clamping", caused by a complex of CEMCs of various particular vibrational modes peculiar to the resonator. As the difference between "free" and "overall clamped" permittivities is always determined by the maximal piezomaterial ki3 coupling coefficient, the difference does not depend on the path that was gone through the low-high frequency range, which includes all the vibrational modes possible for a particular PR. The influence of the piezoelectric and elastic anisotropy of lead-zirconate-titanate (PZT) piezoceramic materials on relative CEMC variations was experimentally investigated.

Application of HF Doppler measurements for the investigation of internal atmospheric waves in the ionosphere

NASA Astrophysics Data System (ADS)

Petrova, I. R.; Bochkarev, V. V.; Latipov, R. R.

2009-09-01

We present results of the spectral analysis of data series of Doppler frequency shifted signals reflected from the ionosphere, using experimental data received at Kazan University, Russia. Spectra of variations with periods from 1 min to 60 days have been calculated and analyzed for different scales of periods. The power spectral density for spring and winter differs by a factor of 3-4. Local maxima of variation amplitude are detected, which are statistically significant. The periods of these amplitude increases range from 6 to 12 min for winter, and from 24 to 48 min for autumn. Properties of spectra for variations with the periods of 1-72 h have been analyzed. The maximum of variation intensity for all seasons and frequencies corresponds to the period of 24 h. Spectra of variations with periods from 3 to 60 days have been calculated. The maxima periods of power spectral density have been detected by the MUSIC method for the high spectral resolution. The detected periods correspond to planetary wave periods. Analysis of spectra for days with different level of geomagnetic activity shows that the intensity of variations for days with a high level of geomagnetic activity is higher.

Refractivity variations and propagation at Ultra High Frequency

NASA Astrophysics Data System (ADS)

Alam, I.; Najam-Ul-Islam, M.; Mujahid, U.; Shah, S. A. A.; Ul Haq, Rizwan

Present framework is established to deal with the refractivity variations normally affected the radio waves propagation at different frequencies, ranges and different environments. To deal such kind of effects, many researchers proposed several methodologies. One method is to use the parameters from meteorology to investigate these effects of variations in refractivity on propagation. These variations are region specific and we have selected a region of one kilometer height over the English Channel. We have constructed different modified refractivity profiles based on the local meteorological data. We have recorded more than 48 million received signal strength from a communication links of 50 km operating at 2015 MHz in the Ultra High Frequency band giving path loss between transmitting and receiving stations of the experimental setup. We have used parabolic wave equation method to simulate an hourly value of signal strength and compared the obtained simulated loss to the experimental loss. The analysis is made to compute refractivity distribution of standard (STD) and ITU (International Telecommunication Union) refractivity profiles for various evaporation ducts. It is found that a standard refractivity profile is better than the ITU refractivity profiles for the region at 2015 MHz. Further, it is inferred from the analysis of results that 10 m evaporation duct height is the dominant among all evaporation duct heights considered in the research.

Variation in Foot Strike Patterns among Habitually Barefoot and Shod Runners in Kenya.

PubMed

Lieberman, Daniel E; Castillo, Eric R; Otarola-Castillo, Erik; Sang, Meshack K; Sigei, Timothy K; Ojiambo, Robert; Okutoyi, Paul; Pitsiladis, Yannis

2015-01-01

Runners are often categorized as forefoot, midfoot or rearfoot strikers, but how much and why do individuals vary in foot strike patterns when running on level terrain? This study used general linear mixed-effects models to explore both intra- and inter-individual variations in foot strike pattern among 48 Kalenjin-speaking participants from Kenya who varied in age, sex, body mass, height, running history, and habitual use of footwear. High speed video was used to measure lower extremity kinematics at ground contact in the sagittal plane while participants ran down 13 meter-long tracks with three variables independently controlled: speed, track stiffness, and step frequency. 72% of the habitually barefoot and 32% of the habitually shod participants used multiple strike types, with significantly higher levels of foot strike variation among individuals who ran less frequently and who used lower step frequencies. There was no effect of sex, age, height or weight on foot strike angle, but individuals were more likely to midfoot or forefoot strike when they ran on a stiff surface, had a high preferred stride frequency, were habitually barefoot, and had more experience running. It is hypothesized that strike type variation during running, including a more frequent use of forefoot and midfoot strikes, used to be greater before the introduction of cushioned shoes and paved surfaces.

Temporal patterns in road crossing behaviour in roe deer (Capreolus capreolus) at sites with wildlife warning reflectors

PubMed Central

Kämmerle, Jim-Lino; Kröschel, Max; Hagen, Robert; Storch, Ilse; Suchant, Rudi

2017-01-01

Every year, there are millions of documented vehicle collisions involving cervids across Europe and North America. While temporal patterns in collision occurrence are relatively well described, few studies have targeted deer behaviour as a critical component of collision prevention. In this study, we investigated weekly and daily patterns in road crossing behaviour in roe deer. Using road crossing events and movement data obtained from GPS telemetry, we employed mixed-effect models to explain frequency and timing of crossings at five road segments by a number of predictors including traffic volume, deer movement activity and the presence of wildlife warning reflectors. We analysed 13,689 road crossing events by 32 study animals. Individual variation in crossing frequency was high but daily patterns in crossing events were highly consistent among animals. Variation in the intensity of movement activity on a daily and seasonal scale was the main driver of road crossing behaviour. The seasonal variation in crossing frequency reflected differences in movement activity throughout the reproductive cycle, while daily variation in the probability to cross exhibited a clear nocturnal emphasis and reflected crepuscular activity peaks. The frequency of road crossings increased as a function of road density in the home-range, while traffic volume only exerted marginal effects. Movement activity of roe deer in our study coincided with commuter traffic mainly in the early morning and late afternoon during winter and during periods of high spatial activity such as the rut. Both timing and frequency of crossing events remained unchanged in the presence of reflectors. Our results emphasise the importance of behavioural studies for understanding roe deer vehicle-collision patterns and thus provide important information for collision prevention. We suggest that mitigation of collision risk should focus on strategic seasonal measures and animal warning systems targeting drivers. PMID:28953951

High-resolution frequency measurement method with a wide-frequency range based on a quantized phase step law.

PubMed

Du, Baoqiang; Dong, Shaofeng; Wang, Yanfeng; Guo, Shuting; Cao, Lingzhi; Zhou, Wei; Zuo, Yandi; Liu, Dan

2013-11-01

A wide-frequency and high-resolution frequency measurement method based on the quantized phase step law is presented in this paper. Utilizing a variation law of the phase differences, the direct different frequency phase processing, and the phase group synchronization phenomenon, combining an A/D converter and the adaptive phase shifting principle, a counter gate is established in the phase coincidences at one-group intervals, which eliminates the ±1 counter error in the traditional frequency measurement method. More importantly, the direct phase comparison, the measurement, and the control between any periodic signals have been realized without frequency normalization in this method. Experimental results show that sub-picosecond resolution can be easily obtained in the frequency measurement, the frequency standard comparison, and the phase-locked control based on the phase quantization processing technique. The method may be widely used in navigation positioning, space techniques, communication, radar, astronomy, atomic frequency standards, and other high-tech fields.

Length-extension resonator as a force sensor for high-resolution frequency-modulation atomic force microscopy in air.

PubMed

Beyer, Hannes; Wagner, Tino; Stemmer, Andreas

2016-01-01

Frequency-modulation atomic force microscopy has turned into a well-established method to obtain atomic resolution on flat surfaces, but is often limited to ultra-high vacuum conditions and cryogenic temperatures. Measurements under ambient conditions are influenced by variations of the dew point and thin water layers present on practically every surface, complicating stable imaging with high resolution. We demonstrate high-resolution imaging in air using a length-extension resonator operating at small amplitudes. An additional slow feedback compensates for changes in the free resonance frequency, allowing stable imaging over a long period of time with changing environmental conditions.

Assessment of high to low frequency variations of isoprene emission rates using a neural network approach

NASA Astrophysics Data System (ADS)

Boissard, C.; Chervier, F.; Dutot, A. L.

2007-08-01

Using a statistical approach based on artificial neural networks, an emission algorithm (ISO_LF) accounting for high (instantaneous) to low (seasonal) frequency variations was developed for isoprene. ISO_LF was optimised using an isoprene emission data base (ISO-DB) specifically designed for this work. ISO-DB consists of 1321 emission rates collected in the literature, together with 34 environmental variables, measured or assessed using NCDC (National Climatic Data Center) or NCEP (National Centers for Environmental Predictions) meteorological databases. ISO-DB covers a large variety of emitters (25 species) and environmental conditions (10° S to 60° N). When only instantaneous environmental regressors (air temperature and photosynthetic active radiation, PAR) were used, a maximum of 60% of the overall isoprene variability was assessed and the highest emissions were underestimated. Considering a total of 9 high (instantaneous) to low (up to 3 weeks) frequency regressors, ISO_LF accounts for up to 91% of the isoprene emission variability, whatever the emission range, species or climate. Diurnal and seasonal variations are correctly reproduced for textit{Ulex europaeus} with a maximum factor of discrepancy of 4. ISO-LF was found to be mainly sensitive to air temperature cumulated over 3 weeks T21 and to instantaneous light L0 and air temperature T0 variations. T21, T0 and L0 only accounts for 76% of the overall variability. The use of ISO-LF for non stored monoterpene emissions was shown to give poor results.

7 CFR 1755.397 - RUS performance specification for line concentrators.

Code of Federal Regulations, 2014 CFR

2014-01-01

... variation of ±1.5 percent: Low group frequencies (Hz) High group frequencies (Hz) 1209 1336 1477 1633 697 1... for Electrical Purposes. (ii) [Reserved] (5) Bell Communications Research (Bellcore) standards are... System and a Local Digital Switch. (ii) Bell Communications Research (Bellcore) document TR-TSY-000057...

7 CFR 1755.397 - RUS performance specification for line concentrators.

Code of Federal Regulations, 2012 CFR

2012-01-01

... variation of ±1.5 percent: Low group frequencies (Hz) High group frequencies (Hz) 1209 1336 1477 1633 697 1... for Electrical Purposes. (ii) [Reserved] (5) Bell Communications Research (Bellcore) standards are... System and a Local Digital Switch. (ii) Bell Communications Research (Bellcore) document TR-TSY-000057...

7 CFR 1755.397 - RUS performance specification for line concentrators.

Code of Federal Regulations, 2011 CFR

2011-01-01

... variation of ±1.5 percent: Low group frequencies (Hz) High group frequencies (Hz) 1209 1336 1477 1633 697 1... for Electrical Purposes. (ii) [Reserved] (5) Bell Communications Research (Bellcore) standards are... System and a Local Digital Switch. (ii) Bell Communications Research (Bellcore) document TR-TSY-000057...

7 CFR 1755.397 - RUS performance specification for line concentrators.

Code of Federal Regulations, 2013 CFR

2013-01-01

... variation of ±1.5 percent: Low group frequencies (Hz) High group frequencies (Hz) 1209 1336 1477 1633 697 1... for Electrical Purposes. (ii) [Reserved] (5) Bell Communications Research (Bellcore) standards are... System and a Local Digital Switch. (ii) Bell Communications Research (Bellcore) document TR-TSY-000057...

Stabilized soliton self-frequency shift and 0.1- PHz sideband generation in a photonic-crystal fiber with an air-hole-modified core.

PubMed

Liu, Bo-Wen; Hu, Ming-Lie; Fang, Xiao-Hui; Li, Yan-Feng; Chai, Lu; Wang, Ching-Yue; Tong, Weijun; Luo, Jie; Voronin, Aleksandr A; Zheltikov, Aleksei M

2008-09-15

Fiber dispersion and nonlinearity management strategy based on a modification of a photonic-crystal fiber (PCF) core with an air hole is shown to facilitate optimization of PCF components for a stable soliton frequency shift and subpetahertz sideband generation through four-wave mixing. Spectral recoil of an optical soliton by a red-shifted dispersive wave, generated through a soliton instability induced by high-order fiber dispersion, is shown to stabilize the soliton self-frequency shift in a highly nonlinear PCF with an air-hole-modified core relative to pump power variations. A fiber with a 2.3-microm-diameter core modified with a 0.9-microm-diameter air hole is used to demonstrate a robust soliton self-frequency shift of unamplified 50-fs Ti: sapphire laser pulses to a central wavelength of about 960 nm, which remains insensitive to variations in the pump pulse energy within the range from 60 to at least 100 pJ. In this regime of frequency shifting, intense high- and low-frequency branches of dispersive wave radiation are simultaneously observed in the spectrum of PCF output. An air-hole-modified-core PCF with appropriate dispersion and nonlinearity parameters is shown to provide efficient four-wave mixing, giving rise to Stokes and anti-Stokes sidebands whose frequency shift relative to the pump wavelength falls within the subpetahertz range, thus offering an attractive source for nonlinear Raman microspectroscopy.

Time Delays of Blazar Flares Observed at Different Wavebands

NASA Technical Reports Server (NTRS)

Marscher, Alan P.

2000-01-01

Correlated variability at different frequencies can probe the structure and physics of the jet of a blazar on size scales much smaller than can be resolved by telescopes and interferometers. I discuss some observations of frequency dependent time lags and how these place constraints on models for the nonthermal emission in blazars. The time lags can be either positive (high frequency variations leading those at lower frequencies) or negative, while simultaneous flares are also possible.

Temperature dependence of piezoelectric properties for textured SBN ceramics.

PubMed

Kimura, Masahiko; Ogawa, Hirozumi; Kuroda, Daisuke; Sawada, Takuya; Higuchi, Yukio; Takagi, Hiroshi; Sakabe, Yukio

2007-12-01

Temperature dependences of piezoelectric properties were studied for h001i textured ceramics of bismuth layer-structured ferroelectrics, SrBi(2)Nb(2)O(9) (SBN). The textured ceramics with varied orientation degrees were fabricated by templated, grain-growth method, and the temperature dependences of resonance frequency were estimated. Excellent temperature stability of resonance frequency was obtained for the 76% textured ceramics. The resonance frequency of the 76% textured specimens varied almost linearly over a wide temperature range. Therefore, the variation was slight, even in a high temperature region above 150 degrees C. Temperature stability of a quartz crystal oscillator is generally higher than that of a ceramic resonator around room temperature. The variation of resonance frequency for the 76% textured SrBi(2)Nb(2)O(9) was larger than that of oscillation frequency for a typical quartz oscillator below 150 degrees C also in this study. However, the variation of the textured SrBi(2)Nb(2)O(9) was smaller than that of the quartz oscillator over a wide temperature range from -50 to 250 degrees C. Therefore, textured SrBi(2)Nb(2)O(9) ceramics is a major candidate material for the resonators used within a wide temperature range.

A new cloud and aerosol layer detection method based on micropulse lidar measurements

NASA Astrophysics Data System (ADS)

Zhao, Chuanfeng; Wang, Yuzhao; Wang, Qianqian; Li, Zhanqing; Wang, Zhien; Liu, Dong

2014-06-01

This paper introduces a new algorithm to detect aerosols and clouds based on micropulse lidar measurements. A semidiscretization processing technique is first used to inhibit the impact of increasing noise with distance. The value distribution equalization method which reduces the magnitude of signal variations with distance is then introduced. Combined with empirical threshold values, we determine if the signal waves indicate clouds or aerosols. This method can separate clouds and aerosols with high accuracy, although differentiation between aerosols and clouds are subject to more uncertainties depending on the thresholds selected. Compared with the existing Atmospheric Radiation Measurement program lidar-based cloud product, the new method appears more reliable and detects more clouds with high bases. The algorithm is applied to a year of observations at both the U.S. Southern Great Plains (SGP) and China Taihu sites. At the SGP site, the cloud frequency shows a clear seasonal variation with maximum values in winter and spring and shows bimodal vertical distributions with maximum occurrences at around 3-6 km and 8-12 km. The annual averaged cloud frequency is about 50%. The dominant clouds are stratiform in winter and convective in summer. By contrast, the cloud frequency at the Taihu site shows no clear seasonal variation and the maximum occurrence is at around 1 km. The annual averaged cloud frequency is about 15% higher than that at the SGP site. A seasonal analysis of cloud base occurrence frequency suggests that stratiform clouds dominate at the Taihu site.

Use of high-frequency peak in spectral analysis of heart rate increment to improve screening of obstructive sleep apnoea.

PubMed

Poupard, Laurent; Court-Fortune, Isabelle; Pichot, Vincent; Chouchou, Florian; Barthélémy, Jean-Claude; Roche, Frédéric

2011-12-01

Several studies have correlated the ratio of the very low frequency power spectral density of heart rate increment (%VLFI) with obstructive sleep apnoea syndrome (OSAS). However, patients with impaired heart rate variability may exhibit large variations of heart rate increment (HRI) spectral pattern and alter the screening accuracy of the method. To overcome this limitation, the present study uses the high-frequency increment (HFI) peak in the HRI spectrum, which corresponds to the respiratory influence on RR variations over the frequency range 0.2 to 0.4 Hz. We evaluated 288 consecutive patients referred for snoring, observed nocturnal breathing cessation and/or daytime sleepiness. Patients were classified as OSAS if their apnoea plus hypopnoea index (AHI) during polysomnography exceeded 15 events per hour. Synchronized electrocardiogram Holter monitoring allowed HRI analysis. Using a %VLFI threshold >2.4% for identifying the presence of OSAS, sensitivity for OSAS was 74.9%, specificity 51%, positive predictive value 54.9% and negative predictive value 71.7% (33 false negative subjects). Using threshold for %VLFI >2.4% and HFI peak position >0.4 Hz, negative predictive value increased to 78.2% while maintaining specificity at 50.6%. Among 11 subjects with %VLFI <2.4% and HFI peak >0.4 Hz, nine demonstrated moderate to severe OSAS (AHI >30). HFI represents a minimal physiological criterion for applying %VLFI by ensuring that heart rate variations are band frequency limited.

There’s More to Groove than Bass in Electronic Dance Music: Why Some People Won’t Dance to Techno

PubMed Central

2016-01-01

The purpose of this study was to explore the relationship between audio descriptors for groove-based electronic dance music (EDM) and raters’ perceived cognitive, affective, and psychomotor responses. From 198 musical excerpts (length: 15 sec.) representing 11 subgenres of EDM, 19 low-level audio feature descriptors were extracted. A principal component analysis of the feature vectors indicated that the musical excerpts could effectively be classified using five complex measures, describing the rhythmical properties of: (a) the high-frequency band, (b) the mid-frequency band, and (c) the low-frequency band, as well as overall fluctuations in (d) dynamics, and (e) timbres. Using these five complex audio measures, four meaningful clusters of the EDM excerpts emerged with distinct musical attributes comprising music with: (a) isochronous bass and static timbres, (b) isochronous bass with fluctuating dynamics and rhythmical variations in the mid-frequency range, (c) non-isochronous bass and fluctuating timbres, and (d) non-isochronous bass with rhythmical variations in the high frequencies. Raters (N = 99) were each asked to respond to four musical excerpts using a four point Likert-Type scale consisting of items representing cognitive (n = 9), affective (n = 9), and psychomotor (n = 3) domains. Musical excerpts falling under the cluster of “non-isochronous bass with rhythmical variations in the high frequencies” demonstrated the overall highest composite scores as evaluated by the raters. Musical samples falling under the cluster of “isochronous bass with static timbres” demonstrated the overall lowest composite scores as evaluated by the raters. Moreover, music preference was shown to significantly affect the systematic patterning of raters’ responses for those with a musical preference for “contemporary” music, “sophisticated” music, and “intense” music. PMID:27798645

Seismological properties of intermediate-mass stars

NASA Astrophysics Data System (ADS)

Audard, N.; Provost, J.

1994-02-01

Stars more massive than about 1.2 solar mass are characterized by a convective core, which induces at its frontier a rapid variation of the density, sound speed and Brunt-Vaisala frequency, close to a discontinuity. For three stars of 1, 1.5 and 2 solar mass we have studied the properties of p-mode frequencies of high radial order and low degree, and we present results on the effects on p-mode oscillations of some rapid variations of the internal structure. We first point out the difficulties of the classical asymptotic theory to represent with accuracy the p-mode spectrum of the stars considered. We compare the numerical frequencies with asymptotic and polynomial approximations obtained from fits. The variation of the derived global coefficients characterizing the p-mode spectrum along the evolutionary tracks has been estimated; it would help to separate the effects of age and mass of intermediate-mass stars. The sensitivity of these coefficients to stellar parameters substantially depends on the stellar mass and must be considered for asteroseismic calibration. The effects of rapid variations in the stellar internal structure are finally considered. An asymptotic formula taking into account the rapid variation of the sound speed at the convective core boundary of the 1.5 and 2 solar mass stars predicts an oscillatory behavior of the frequencies with a very large period. We also show that the second frequency difference delta2nu = nun, l - 2nun-1, l + nun-2, l exhibits a substantial oscillation which corresponds to the region of the He II ionization of the 1, 1.5 and 2 solar mass stars.

Frequency comb generation in a silicon ring resonator modulator.

PubMed

Demirtzioglou, Iosif; Lacava, Cosimo; Bottrill, Kyle R H; Thomson, David J; Reed, Graham T; Richardson, David J; Petropoulos, Periklis

2018-01-22

We report on the generation of an optical comb of highly uniform in power frequency lines (variation less than 0.7 dB) using a silicon ring resonator modulator. A characterization involving the measurement of the complex transfer function of the ring is presented and five frequency tones with a 10-GHz spacing are produced using a dual-frequency electrical input at 10 and 20 GHz. A comb shape comparison is conducted for different modulator bias voltages, indicating optimum operation at a small forward-bias voltage. A time-domain measurement confirmed that the comb signal was highly coherent, forming 20.3-ps-long pulses.

Variation in Nephrologist Visits to Patients on Hemodialysis across Dialysis Facilities and Geographic Locations

PubMed Central

Tan, Kelvin B.; Winkelmayer, Wolfgang C.; Chertow, Glenn M.; Bhattacharya, Jay

2013-01-01

Summary Background and objectives Geographic and other variations in medical practices lead to differences in medical costs, often without a clear link to health outcomes. This work examined variation in the frequency of physician visits to patients receiving hemodialysis to measure the relative importance of provider practice patterns (including those patterns linked to geographic region) and patient health in determining visit frequency. Design, setting, participants, & measurements This work analyzed a nationally representative 2006 database of patients receiving hemodialysis in the United States. A variation decomposition analysis of the relative importance of facility, geographic region, and patient characteristics—including demographics, socioeconomic status, and indicators of health status—in explaining physician visit frequency variation was conducted. Finally, the associations between facility, geographic and patient characteristics, and provider visit frequency were measured using multivariable regression. Results Patient characteristics accounted for only 0.9% of the total visit frequency variation. Accounting for case-mix differences, patients’ hemodialysis facilities explained about 24.9% of visit frequency variation, of which 9.3% was explained by geographic region. Visit frequency was more closely associated with many facility and geographic characteristics than indicators of health status. More recent dialysis initiation and recent hospitalization were associated with decreased visit frequency. Conclusions In hemodialysis, provider visit frequency depends more on geography and facility location and characteristics than patients’ health status or acuity of illness. The magnitude of variation unrelated to patient health suggests that provider visit frequency practices do not reflect optimal management of patients on dialysis. PMID:23430207

Variation in Foot Strike Patterns among Habitually Barefoot and Shod Runners in Kenya

PubMed Central

Lieberman, Daniel E.; Castillo, Eric R.; Otarola-Castillo, Erik; Sang, Meshack K.; Sigei, Timothy K.; Ojiambo, Robert; Okutoyi, Paul; Pitsiladis, Yannis

2015-01-01

Runners are often categorized as forefoot, midfoot or rearfoot strikers, but how much and why do individuals vary in foot strike patterns when running on level terrain? This study used general linear mixed-effects models to explore both intra- and inter-individual variations in foot strike pattern among 48 Kalenjin-speaking participants from Kenya who varied in age, sex, body mass, height, running history, and habitual use of footwear. High speed video was used to measure lower extremity kinematics at ground contact in the sagittal plane while participants ran down 13 meter-long tracks with three variables independently controlled: speed, track stiffness, and step frequency. 72% of the habitually barefoot and 32% of the habitually shod participants used multiple strike types, with significantly higher levels of foot strike variation among individuals who ran less frequently and who used lower step frequencies. There was no effect of sex, age, height or weight on foot strike angle, but individuals were more likely to midfoot or forefoot strike when they ran on a stiff surface, had a high preferred stride frequency, were habitually barefoot, and had more experience running. It is hypothesized that strike type variation during running, including a more frequent use of forefoot and midfoot strikes, used to be greater before the introduction of cushioned shoes and paved surfaces. PMID:26154285

High-speed polarization sensitive optical frequency domain imaging with frequency multiplexing

PubMed Central

Yun, S.H.; Vakoc, B.J.; Shishkov, M.; Desjardins, A.E.; Park, B.H.; de Boer, J.F.; Tearney, G.J.; Bouma, B.E.

2009-01-01

Polarization sensitive optical coherence tomography (PS-OCT) provides a cross-sectional image of birefringence in biological samples that is complementary in many applications to the standard reflectance-based image. Recent ex vivo studies have demonstrated that birefringence mapping enables the characterization of collagen and smooth muscle concentration and distribution in vascular tissues. Instruments capable of applying these measurements percutaneously in vivo may provide new insights into coronary atherosclerosis and acute myocardial infarction. We have developed a polarization sensitive optical frequency domain imaging (PS-OFDI) system that enables high-speed intravascular birefringence imaging through a fiber-optic catheter. The novel design of this system utilizes frequency multiplexing to simultaneously measure reflectance of two incident polarization states, overcoming concerns regarding temporal variations of the catheter fiber birefringence and spatial variations in the birefringence of the sample. We demonstrate circular cross-sectional birefringence imaging of a human coronary artery ex vivo through a flexible fiber-optic catheter with an A-line rate of 62 kHz and a ranging depth of 6.2 mm. PMID:18542183

Frequency-Dependent Selection: The High Potential for Permanent Genetic Variation in the Diallelic, Pairwise Interaction Model

PubMed Central

Asmussen, M. A.; Basnayake, E.

1990-01-01

A detailed analytic and numerical study is made of the potential for permanent genetic variation in frequency-dependent models based on pairwise interactions among genotypes at a single diallelic locus. The full equilibrium structure and qualitative gene-frequency dynamics are derived analytically for a symmetric model, in which pairwise fitnesses are chiefly determined by the genetic similarity of the individuals involved. This is supplemented by an extensive numerical investigation of the general model, the symmetric model, and nine other special cases. Together the results show that there is a high potential for permanent genetic diversity in the pairwise interaction model, and provide insight into the extent to which various forms of genotypic interactions enhance or reduce this potential. Technically, although two stable polymorphic equilibria are possible, the increased likelihood of maintaining both alleles, and the poor performance of protected polymorphism conditions as a measure of this likelihood, are primarily due to a greater variety and frequency of equilibrium patterns with one stable polymorphic equilibrium, in conjunction with a disproportionately large domain of attraction for stable internal equilibria. PMID:2341034

High-Frequency Observation of Water Spectrum and Its Application in Monitoring of Dynamic Variation of Suspended Materials in the Hangzhou Bay.

PubMed

Dai, Qian; Pan, De-lu; He, Xian-qiang; Zhu, Qian-kun; Gong, Fang; Huang, Hai-qing

2015-11-01

In situ measurement of water spectrum is the basis of the validation of the ocean color remote sensing. The traditional method to obtain the water spectrum is based on the shipboard measurement at limited stations, which is difficult to meet the requirement of validation of ocean color remote sensing in the highly dynamic coastal waters. To overcome this shortage, continuously observing systems of water spectrum have been developed in the world. However, so far, there are still few high-frequency observation systems of the water spectrum in coastal waters, especially in the highly turbid and high-dynamic waters. Here, we established a high-frequency water-spectrum observing system based on tower in the Hangzhou Bay. The system measures the water spectrum at a step of 3 minutes, which can fully match the satellite observation. In this paper, we primarily developed a data processing method for the tower-based high-frequency water spectrum data, to realize automatic judgment of clear sky, sun glint, platform shadow, and weak illumination, etc. , and verified the processing results. The results show that the normalized water-leaving radiance spectra obtained through tower observation have relatively high consistency with the shipboard measurement results, with correlation coefficient of more than 0. 99, and average relative error of 9.96%. In addition, the long-term observation capability of the tower-based high-frequency water-spectrum observing system was evaluated, and the results show that although the system has run for one year, the normalized water-leaving radiance obtained by this system have good consistency with the synchronously measurement by Portable spectrometer ASD in respect of spectral shape and value, with correlation coefficient of more than 0.90 and average relative error of 6.48%. Moreover, the water spectra from high-frequency observation by the system can be used to effectively monitor the rapid dynamic variation in concentration of suspended materials with tide. The tower-based high-frequency water-spectrum observing system provided rich in situ spectral data for the validation of ocean color remote sensing in turbid waters, especially for validation of the high temporal-resolution geostationary satellite ocean color remote sensing.

Calibration of semi-stochastic procedure for simulating high-frequency ground motions

USGS Publications Warehouse

Seyhan, Emel; Stewart, Jonathan P.; Graves, Robert

2013-01-01

Broadband ground motion simulation procedures typically utilize physics-based modeling at low frequencies, coupled with semi-stochastic procedures at high frequencies. The high-frequency procedure considered here combines deterministic Fourier amplitude spectra (dependent on source, path, and site models) with random phase. Previous work showed that high-frequency intensity measures from this simulation methodology attenuate faster with distance and have lower intra-event dispersion than in empirical equations. We address these issues by increasing crustal damping (Q) to reduce distance attenuation bias and by introducing random site-to-site variations to Fourier amplitudes using a lognormal standard deviation ranging from 0.45 for Mw < 7 to zero for Mw 8. Ground motions simulated with the updated parameterization exhibit significantly reduced distance attenuation bias and revised dispersion terms are more compatible with those from empirical models but remain lower at large distances (e.g., > 100 km).

A new rate-dependent model for high-frequency tracking performance enhancement of piezoactuator system

NASA Astrophysics Data System (ADS)

Tian, Lizhi; Xiong, Zhenhua; Wu, Jianhua; Ding, Han

2017-05-01

Feedforward-feedback control is widely used in motion control of piezoactuator systems. Due to the phase lag caused by incomplete dynamics compensation, the performance of the composite controller is greatly limited at high frequency. This paper proposes a new rate-dependent model to improve the high-frequency tracking performance by reducing dynamics compensation error. The rate-dependent model is designed as a function of the input and input variation rate to describe the input-output relationship of the residual system dynamics which mainly performs as phase lag in a wide frequency band. Then the direct inversion of the proposed rate-dependent model is used to compensate the residual system dynamics. Using the proposed rate-dependent model as feedforward term, the open loop performance can be improved significantly at medium-high frequency. Then, combining the with feedback controller, the composite controller can provide enhanced close loop performance from low frequency to high frequency. At the frequency of 1 Hz, the proposed controller presents the same performance as previous methods. However, at the frequency of 900 Hz, the tracking error is reduced to be 30.7% of the decoupled approach.

Global and disease-associated genetic variation in the human Fanconi anemia gene family

PubMed Central

Rogers, Kai J.; Fu, Wenqing; Akey, Joshua M.; Monnat, Raymond J.

2014-01-01

Fanconi anemia (FA) is a human recessive genetic disease resulting from inactivating mutations in any of 16 FANC (Fanconi) genes. Individuals with FA are at high risk of developmental abnormalities, early bone marrow failure and leukemia. These are followed in the second and subsequent decades by a very high risk of carcinomas of the head and neck and anogenital region, and a small continuing risk of leukemia. In order to characterize base pair-level disease-associated (DA) and population genetic variation in FANC genes and the segregation of this variation in the human population, we identified 2948 unique FANC gene variants including 493 FA DA variants across 57 240 potential base pair variation sites in the 16 FANC genes. We then analyzed the segregation of this variation in the 7578 subjects included in the Exome Sequencing Project (ESP) and the 1000 Genomes Project (1KGP). There was a remarkably high frequency of FA DA variants in ESP/1KGP subjects: at least 1 FA DA variant was identified in 78.5% (5950 of 7578) individuals included in these two studies. Six widely used functional prediction algorithms correctly identified only a third of the known, DA FANC missense variants. We also identified FA DA variants that may be good candidates for different types of mutation-specific therapies. Our results demonstrate the power of direct DNA sequencing to detect, estimate the frequency of and follow the segregation of deleterious genetic variation in human populations. PMID:25104853

The long-term evolution of multilocus traits under frequency-dependent disruptive selection.

PubMed

van Doorn, G Sander; Dieckmann, Ulf

2006-11-01

Frequency-dependent disruptive selection is widely recognized as an important source of genetic variation. Its evolutionary consequences have been extensively studied using phenotypic evolutionary models, based on quantitative genetics, game theory, or adaptive dynamics. However, the genetic assumptions underlying these approaches are highly idealized and, even worse, predict different consequences of frequency-dependent disruptive selection. Population genetic models, by contrast, enable genotypic evolutionary models, but traditionally assume constant fitness values. Only a minority of these models thus addresses frequency-dependent selection, and only a few of these do so in a multilocus context. An inherent limitation of these remaining studies is that they only investigate the short-term maintenance of genetic variation. Consequently, the long-term evolution of multilocus characters under frequency-dependent disruptive selection remains poorly understood. We aim to bridge this gap between phenotypic and genotypic models by studying a multilocus version of Levene's soft-selection model. Individual-based simulations and deterministic approximations based on adaptive dynamics theory provide insights into the underlying evolutionary dynamics. Our analysis uncovers a general pattern of polymorphism formation and collapse, likely to apply to a wide variety of genetic systems: after convergence to a fitness minimum and the subsequent establishment of genetic polymorphism at multiple loci, genetic variation becomes increasingly concentrated on a few loci, until eventually only a single polymorphic locus remains. This evolutionary process combines features observed in quantitative genetics and adaptive dynamics models, and it can be explained as a consequence of changes in the selection regime that are inherent to frequency-dependent disruptive selection. Our findings demonstrate that the potential of frequency-dependent disruptive selection to maintain polygenic variation is considerably smaller than previously expected.

Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits.

PubMed

da Silva, Joaquim Manoel; Giachetto, Poliana Fernanda; da Silva, Luiz Otávio; Cintra, Leandro Carrijo; Paiva, Samuel Rezende; Yamagishi, Michel Eduardo Beleza; Caetano, Alexandre Rodrigues

2016-06-13

Copy number variations (CNVs) have been shown to account for substantial portions of observed genomic variation and have been associated with qualitative and quantitative traits and the onset of disease in a number of species. Information from high-resolution studies to detect, characterize and estimate population-specific variant frequencies will facilitate the incorporation of CNVs in genomic studies to identify genes affecting traits of importance. Genome-wide CNVs were detected in high-density single nucleotide polymorphism (SNP) genotyping data from 1,717 Nelore (Bos indicus) cattle, and in NGS data from eight key ancestral bulls. A total of 68,007 and 12,786 distinct CNVs were observed, respectively. Cross-comparisons of results obtained for the eight resequenced animals revealed that 92 % of the CNVs were observed in both datasets, while 62 % of all detected CNVs were observed to overlap with previously validated cattle copy number variant regions (CNVRs). Observed CNVs were used for obtaining breed-specific CNV frequencies and identification of CNVRs, which were subsequently used for gene annotation. A total of 688 of the detected CNVRs were observed to overlap with 286 non-redundant QTLs associated with important production traits in cattle. All of 34 CNVs previously reported to be associated with milk production traits in Holsteins were also observed in Nelore cattle. Comparisons of estimated frequencies of these CNVs in the two breeds revealed 14, 13, 6 and 14 regions in high (>20 %), low (<20 %) and divergent (NEL > HOL, NEL < HOL) frequencies, respectively. Obtained results significantly enriched the bovine CNV map and enabled the identification of variants that are potentially associated with traits under selection in Nelore cattle, particularly in genome regions harboring QTLs affecting production traits.

Variation of Static-PPP Positioning Accuracy Using GPS-Single Frequency Observations (Aswan, Egypt)

NASA Astrophysics Data System (ADS)

Farah, Ashraf

2017-06-01

Precise Point Positioning (PPP) is a technique used for position computation with a high accuracy using only one GNSS receiver. It depends on highly accurate satellite position and clock data rather than broadcast ephemeries. PPP precision varies based on positioning technique (static or kinematic), observations type (single or dual frequency) and the duration of collected observations. PPP-(dual frequency receivers) offers comparable accuracy to differential GPS. PPP-single frequency receivers has many applications such as infrastructure, hydrography and precision agriculture. PPP using low cost GPS single-frequency receivers is an area of great interest for millions of users in developing countries such as Egypt. This research presents a study for the variability of single frequency static GPS-PPP precision based on different observation durations.

Benign, Pathogenic and Copy Number Variations of Unknown Clinical Significance in Patients with Congenital Malformations and Developmental Delay.

PubMed

Mihaylova, M; Staneva, R; Toncheva, D; Pancheva, M; Hadjidekova, S

2017-06-30

The high frequency (3.0-5.0%) of congenital anomalies (CA) and intellectual disabilities (IDs), make them a serious problem, responsible for a high percentage (33.0%) of neonatal mortality. The genetic cause remains unclear in 40.0% of cases. Recently, molecular karyotyping has become the most powerful method for detection of pathogenic imbalances in patients with multiple CAs and IDs. This method is with high resolution and gives us the opportunity to investigate and identify candidate genes that could explain the genotype-phenotype correlations. This article describes the results from analysis of 81 patients with congenital malformations (CMs), developmental delay (DD) and ID, in which we utilized the CytoChip ISCA oligo microarray, 4 × 44 k, covering the whole genome with a resolution of 70 kb. In the selected group of patients with CAs, 280 copy number variations (CNVs) have been proven, 41 were pathogenic, 118 benign and 121 of unknown clinical significance (average number of variations 3.5). In six patients with established pathogenic variations, our data revealed eight pathogenic aberrations associated with the corresponding phenotype. The interpretation of the other CNVs was made on the basis of their frequency in the investigated group, the size of the variation, content of genes in the region and the type of the CNVs (deletion or duplication).

Determining the effects of dams on subdaily variation in river flows at a whole-basin scale

USGS Publications Warehouse

Zimmerman, J.K.H.; Letcher, B.H.; Nislow, K.H.; Lutz, K.A.; Magilligan, F.J.

2010-01-01

River regulation can alter the frequency and magnitude of subdaily flow variations causing major impacts on ecological structure and function. We developed an approach to quantify subdaily flow variation for multiple sites across a large watershed to assess the potential impacts of different dam operations (flood control, run-of-river hydropower and peaking hydropower) on natural communities. We used hourly flow data over a 9-year period from 30 stream gages throughout the Connecticut River basin to calculate four metrics of subdaily flow variation and to compare sites downstream of dams with unregulated sites. Our objectives were to (1) determine the temporal scale of data needed to characterize subdaily variability; (2) compare the frequency of days with high subdaily flow variation downstream of dams and unregulated sites; (3) analyse the magnitude of subdaily variation at all sites and (4) identify individual sites that had subdaily variation significantly higher than unregulated locations. We found that estimates of flow variability based on daily mean flow data were not sufficient to characterize subdaily flow patterns. Alteration of subdaily flows was evident in the number of days natural ranges of variability were exceeded, rather than in the magnitude of subdaily variation, suggesting that all rivers may exhibit highly variable subdaily flows, but altered rivers exhibit this variability more frequently. Peaking hydropower facilities had the most highly altered subdaily flows; however, we observed significantly altered ranges of subdaily variability downstream of some flood-control and run-of-river hydropower dams. Our analysis can be used to identify situations where dam operating procedures could be modified to reduce the level of hydrologic alteration. ?? 2009 John Wiley & Sons, Ltd.

Investigation of an Axial Fan—Blade Stress and Vibration Due to Aerodynamic Pressure Field and Centrifugal Effects

NASA Astrophysics Data System (ADS)

Xu, Cheng; Amano, Ryoichi Samuel; Lee, Eng Kwong

A 1.829m (6ft) diameter industrial large flow-rate axial fan operated at 1770rpm was studied experimentally in laboratory conditions. The flow characteristics on the fan blade surfaces were investigated by measuring the pressure distributions on the blade suction and pressure surfaces and the results were discussed by comparing with analytical formulations and CFD. Flow visualizations were also performed to validate the flow characteristics near the blade surface and it was demonstrated that the flow characteristics near the fan blade surface were dominated by the centrifugal force of the fan rotation which resulted in strong three-dimensional flows. The time-dependent pressure measurement showed that the pressure oscillations on the fan blade were significantly dominated by vortex shedding from the fan blades. It was further demonstrated that the pressure distributions during the fan start-up were highly unsteady, and the main frequency variation of the static pressure was much smaller than the fan rotational frequency. The time-dependent pressure measurement when the fan operated at a constant speed showed that the magnitude of the blade pressure variation with time and the main variation frequency was much smaller than the fan rotational frequency. The pressure variations that were related to the vortex shedding were slightly smaller than the fan rotational frequency. The strain gages were used to measure the blade stress and the results were compared with FEA results.

A new visually evoked cerebral blood flow response analysis using a low-frequency estimation.

PubMed

Rey, Beatriz; Naranjo, Valery; Parkhutik, Vera; Tembl, José; Alcañiz, Mariano

2010-03-01

Transcranial Doppler (TCD) has been widely used to monitor cerebral blood flow velocity (BFV) during the performance of cognitive tasks compared with repose periods. Although one of its main advantages is its high temporal resolution, only some of the previous functional TCD studies have focused on the analysis of the temporal evolution of the BFV signal and none of them has performed a spectral analysis of the signal. In this study, maximum BFV data in both posterior cerebral arteries was monitored during a visual perception task (10 cycles of alternating darkness and illumination) for 23 subjects. A peak was located in the low-frequency band of the spectrum of the maximum BFV of each subject both during visual stimulation and repose periods. The frequency of this peak was in the range between 0.037 and 0.098Hz, depending on the subject, the vessel and the experimental condition. The component of the signal at this frequency, which is associated with the slow variations caused by the visual stimuli, was estimated. That way, the variations in BFV caused by the experimental stimuli were isolated from the variations caused by other factors. This low-frequency estimation signal was used to obtain parameters about the temporal evolution and the magnitude variations of the BFV in a reliable way, thus, characterizing the neurovascular coupling of the participants. Copyright 2010 World Federation for Ultrasound in Medicine & Biology. Published by Elsevier Inc. All rights reserved.

The contribution of accommodation and the ocular surface to the microfluctuations of wavefront aberrations of the eye.

PubMed

Zhu, Mingxia; Collins, Michael J; Iskander, D Robert

2006-09-01

We have used videokeratoscopy and wavefront sensing to investigate the contribution of the ocular surface and the effect of stimulus vergence on the microfluctuations of the wavefront aberrations of the eye. The fluctuations of the wavefront aberrations were quantified by their variations around the mean and by using power spectrum analysis. Integrated power was determined in two regions: 0.1-0.7 Hz (low frequencies) and 0.8-1.8 Hz (high frequencies). Changes in the ocular surface topography were measured using high-speed videokeratoscopy and variations in the ocular wavefront aberrations were measured with a wavefront sensor. The microfluctuations of wavefront aberrations of the ocular surface were found to be considerably smaller than the microfluctuations of the wavefront aberrations of the total eye. The fluctuations in defocus while viewing a closer target at 2 or 4 D were found to be significantly greater than fluctuations in defocus when viewing a far target. This increase in defocus fluctuations (p < or = 0.001) occurred in both the low- and high-frequency regions of the power spectra.

Underwater Sound: Deep-Ocean Propagation: Variations of temperature and pressure have great influence on the propagation of sound in the ocean.

PubMed

Frosch, R A

1964-11-13

The absorption of sound in sea water varies markedly with frequency, being much greater at high than at low frequencies. It is sufficiently small at frequencies below several kilocycles per second, however, to permit propagation to thousands of miles. Oceanographic factors produce variations in sound velocity with depth, and these variations have a strong influence on long-range propagation. The deep ocean is characterized by a strong channel, generally at a depth of 500 to 1500 meters. In addition to guided propagation in this channel, the velocity structure gives rise to strongly peaked propagation from surface sources to surface receivers 48 to 56 kilometers away, with strong shadow zones of weak intensity in between. The near-surface shadow zone, in the latter case, may be filled in by bottom reflections or near-surface guided propagation due to a surface isothermal layer. The near-surface shadow zones can be avoided with certainty only through locating sources and receivers deep in the ocean.

Total variation-based neutron computed tomography

NASA Astrophysics Data System (ADS)

Barnard, Richard C.; Bilheux, Hassina; Toops, Todd; Nafziger, Eric; Finney, Charles; Splitter, Derek; Archibald, Rick

2018-05-01

We perform the neutron computed tomography reconstruction problem via an inverse problem formulation with a total variation penalty. In the case of highly under-resolved angular measurements, the total variation penalty suppresses high-frequency artifacts which appear in filtered back projections. In order to efficiently compute solutions for this problem, we implement a variation of the split Bregman algorithm; due to the error-forgetting nature of the algorithm, the computational cost of updating can be significantly reduced via very inexact approximate linear solvers. We present the effectiveness of the algorithm in the significantly low-angular sampling case using synthetic test problems as well as data obtained from a high flux neutron source. The algorithm removes artifacts and can even roughly capture small features when an extremely low number of angles are used.

Identifying resonance frequency deviations for high order nano-wire ring resonator filters based on a coupling strength variation

NASA Astrophysics Data System (ADS)

Park, Sahnggi; Kim, Kap-Joong; Kim, Duk-Jun; Kim, Gyungock

2009-02-01

Third order ring resonators are designed and their resonance frequency deviations are analyzed experimentally by processing them with E-beam lithography and ICP etching in a CMOS nano-Fabrication laboratory. We developed a reliable method to identify and reduce experimentally the degree of deviation of each ring resonance frequency before completion of the fabrication process. The identified deviations can be minimized by the way to be presented in this paper. It is expected that this method will provide a significant clue to make a high order multi-channel ring resonators.

Sensitive high frequency hearing in earless and partially eared harlequin frogs (Atelopus).

PubMed

Womack, Molly C; Christensen-Dalsgaard, Jakob; Coloma, Luis A; Hoke, Kim L

2018-04-19

Harlequin frogs, genus Atelopus , communicate at high frequencies despite most species lacking a complete tympanic middle ear that facilitates high frequency hearing in most anurans and other tetrapods. Here we test whether Atelopus are better at sensing high frequency acoustic sound compared to other eared and earless species in the Bufonidae family, determine whether middle ear variation within Atelopus affects hearing sensitivity, and test potential hearing mechanisms in Atelopus We determine that at high frequencies (2000-4000 Hz) Atelopus are 10-34 dB more sensitive than other earless bufonids but are relatively insensitive to mid-range frequencies (900-1500 Hz) compared to eared bufonids. Hearing among Atelopus species is fairly consistent, evidence that the partial middle ears present in a subset of Atelopus species do not convey a substantial hearing advantage. We further demonstrate that Atelopus hearing is not likely facilitated by vibration of the skin overlying the normal tympanic membrane region or the body lung wall, leaving the extratympanic hearing pathways in Atelopus enigmatic. Together these results show Atelopus have sensitive high frequency hearing without the aid of a tympanic middle ear and prompt further study of extratympanic hearing mechanisms in anurans. © 2018. Published by The Company of Biologists Ltd.

Dependence of the colored frequency noise in spin torque oscillators on current and magnetic field

NASA Astrophysics Data System (ADS)

Eklund, Anders; Bonetti, Stefano; Sani, Sohrab R.; Majid Mohseni, S.; Persson, Johan; Chung, Sunjae; Amir Hossein Banuazizi, S.; Iacocca, Ezio; Östling, Mikael; Åkerman, Johan; Gunnar Malm, B.

2014-03-01

The nano-scale spin torque oscillator (STO) is a compelling device for on-chip, highly tunable microwave frequency signal generation. Currently, one of the most important challenges for the STO is to increase its longer-time frequency stability by decreasing the 1/f frequency noise, but its high level makes even its measurement impossible using the phase noise mode of spectrum analyzers. Here, we present a custom made time-domain measurement system with 150 MHz measurement bandwidth making possible the investigation of the variation of the 1/f as well as the white frequency noise in a STO over a large set of operating points covering 18-25 GHz. The 1/f level is found to be highly dependent on the oscillation amplitude-frequency non-linearity and the vicinity of unexcited oscillation modes. These findings elucidate the need for a quantitative theoretical treatment of the low-frequency, colored frequency noise in STOs. Based on the results, we suggest that the 1/f frequency noise possibly can be decreased by improving the microstructural quality of the metallic thin films.

46 CFR 111.01-17 - Voltage and frequency variations.

Code of Federal Regulations, 2013 CFR

2013-10-01

....01-17 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) ELECTRICAL ENGINEERING ELECTRIC SYSTEMS-GENERAL REQUIREMENTS General § 111.01-17 Voltage and frequency variations. Unless otherwise stated, electrical equipment must function at variations of at least ±5 percent of rated frequency...

46 CFR 111.01-17 - Voltage and frequency variations.

Code of Federal Regulations, 2010 CFR

2010-10-01

....01-17 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) ELECTRICAL ENGINEERING ELECTRIC SYSTEMS-GENERAL REQUIREMENTS General § 111.01-17 Voltage and frequency variations. Unless otherwise stated, electrical equipment must function at variations of at least ±5 percent of rated frequency...

46 CFR 111.01-17 - Voltage and frequency variations.

Code of Federal Regulations, 2011 CFR

2011-10-01

....01-17 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) ELECTRICAL ENGINEERING ELECTRIC SYSTEMS-GENERAL REQUIREMENTS General § 111.01-17 Voltage and frequency variations. Unless otherwise stated, electrical equipment must function at variations of at least ±5 percent of rated frequency...

46 CFR 111.01-17 - Voltage and frequency variations.

Code of Federal Regulations, 2012 CFR

2012-10-01

....01-17 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) ELECTRICAL ENGINEERING ELECTRIC SYSTEMS-GENERAL REQUIREMENTS General § 111.01-17 Voltage and frequency variations. Unless otherwise stated, electrical equipment must function at variations of at least ±5 percent of rated frequency...

46 CFR 111.01-17 - Voltage and frequency variations.

Code of Federal Regulations, 2014 CFR

2014-10-01

....01-17 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) ELECTRICAL ENGINEERING ELECTRIC SYSTEMS-GENERAL REQUIREMENTS General § 111.01-17 Voltage and frequency variations. Unless otherwise stated, electrical equipment must function at variations of at least ±5 percent of rated frequency...

Context-dependent female mate choice maintains variation in male sexual activity

PubMed Central

Plath, Martin; Gismann, Jakob; Helfrich, Claudia; Bierbach, David

2017-01-01

The existence of individual variation in males' motivation to mate remains a conundrum as directional selection should favour high mating frequencies. Balancing selection resulting from (context-dependent) female mate choice could contribute to the maintenance of this behavioural polymorphism. In dichotomous choice tests, mosquitofish (Gambusia holbrooki) females preferred virtual males showing intermediate mating frequencies, reflecting females' tendencies to avoid harassment by highly sexually active males. When tested in the presence of a female shoal—which protects females from male harassment—focal females showed significantly stronger preferences for high sexual activity. A trade-off between (indirect) benefits and (direct) costs of mating with sexually active males probably explains context-dependent female mate choice, as costs depend on the social environment in which females choose their mates. No preference was observed when we tested virgin females, suggesting that the behavioural pattern described here is part of the learned behavioural repertoire of G. holbrooki females. PMID:28791157

An accuracy improvement method for the topology measurement of an atomic force microscope using a 2D wavelet transform.

PubMed

Yoon, Yeomin; Noh, Suwoo; Jeong, Jiseong; Park, Kyihwan

2018-05-01

The topology image is constructed from the 2D matrix (XY directions) of heights Z captured from the force-feedback loop controller. For small height variations, nonlinear effects such as hysteresis or creep of the PZT-driven Z nano scanner can be neglected and its calibration is quite straightforward. For large height variations, the linear approximation of the PZT-driven Z nano scanner fail and nonlinear behaviors must be considered because this would cause inaccuracies in the measurement image. In order to avoid such inaccuracies, an additional strain gauge sensor is used to directly measure displacement of the PZT-driven Z nano scanner. However, this approach also has a disadvantage in its relatively low precision. In order to obtain high precision data with good linearity, we propose a method of overcoming the low precision problem of the strain gauge while its feature of good linearity is maintained. We expect that the topology image obtained from the strain gauge sensor showing significant noise at high frequencies. On the other hand, the topology image obtained from the controller output showing low noise at high frequencies. If the low and high frequency signals are separable from both topology images, the image can be constructed so that it is represented with high accuracy and low noise. In order to separate the low frequencies from high frequencies, a 2D Haar wavelet transform is used. Our proposed method use the 2D wavelet transform for obtaining good linearity from strain gauge sensor and good precision from controller output. The advantages of the proposed method are experimentally validated by using topology images. Copyright © 2018 Elsevier B.V. All rights reserved.

A study of voice production characteristics of astronuat speech during Apollo 11 for speaker modeling in space.

PubMed

Yu, Chengzhu; Hansen, John H L

2017-03-01

Human physiology has evolved to accommodate environmental conditions, including temperature, pressure, and air chemistry unique to Earth. However, the environment in space varies significantly compared to that on Earth and, therefore, variability is expected in astronauts' speech production mechanism. In this study, the variations of astronaut voice characteristics during the NASA Apollo 11 mission are analyzed. Specifically, acoustical features such as fundamental frequency and phoneme formant structure that are closely related to the speech production system are studied. For a further understanding of astronauts' vocal tract spectrum variation in space, a maximum likelihood frequency warping based analysis is proposed to detect the vocal tract spectrum displacement during space conditions. The results from fundamental frequency, formant structure, as well as vocal spectrum displacement indicate that astronauts change their speech production mechanism when in space. Moreover, the experimental results for astronaut voice identification tasks indicate that current speaker recognition solutions are highly vulnerable to astronaut voice production variations in space conditions. Future recommendations from this study suggest that successful applications of speaker recognition during extended space missions require robust speaker modeling techniques that could effectively adapt to voice production variation caused by diverse space conditions.

SRB combustion dynamics analysis computer program (CDA-1)

NASA Technical Reports Server (NTRS)

Chung, T. J.; Park, O. Y.

1988-01-01

A two-dimensional numerical model is developed for the unsteady oscillatory combustion of the solid propellant flame zone. Variations of pressure with low and high frequency responses across the long flame, such as in the double-base propellants, are accommodated. The formulation is based on a premixed, laminar flame with a one-step overall chemical reaction and the Arrhenius law of decomposition for the gaseous phase with no condensed phase reaction. Numerical calculations are carried out using the Galerkin finite elements, with perturbations expanded to the zeroth, first, and second orders. The numerical results indicate that amplification of oscillatory motions does indeed prevail in high frequency regions. For the second order system, the trend is similar to the first order system for low frequencies, but instabilities may appear at frequencies lower than those of the first order system. The most significant effect of the second order system is that the admittance is extremely oscillatory between moderately high frequency ranges.

Velocity Spectrum Variation in Central Gulf of Mexico: 9Case Studies for the 2005 Hurricanes

NASA Astrophysics Data System (ADS)

Zhang, F.; Li, C.

2012-12-01

Significant near inertial oscillation caused by hurricanes is common in the ocean. The details of the vertical and temporal variations of hurricane induced near inertial oscillation are usually complicated. We have done a case study of such vertical and temporal variations of velocity spectrum focusing around the inertial frequency for the 2005 hurricane season. Data were from a deep water mooring chain containing a series of current meters and 2 ADCPs from June to November 2005. The velocity spectrum is obtained with a 10-day sliding window at different depths for the 40-hour high-passed data to exclude the low frequency Loop Current variations. This gives a temporal variation of the spectrum at different depths. Such variations in velocity spectrum are resulted from the ocean dynamics influenced by the passage of hurricanes. Our preliminary analysis of the results show that (1) right before the center of the hurricane gets closest to the mooring site, there always exists a 2-peak feature of energy at almost all depths; while during the passage of the hurricane these two peaks will merge Into one peak which has a corresponding period of 30.3 to 25.6 hours, encompassing that corresponding to the inertial frequency in this latitude; (2) after the passage of the hurricane, the decay process of energy is also complicated. It is found that the whole profile can be at least divided into 3 layers: surface to 800m, 800m to 1500m, and 1500m to the bottom, which is consistent with the stratification of the water column. It is also found that shift in the peak frequency to either side of the inertial frequency is very common. The main peak of energy can break into several parts during the decay stage, with blue shift and red shift.; ;

Lapse time and frequency-dependent coda wave attenuation for Delhi and its surrounding regions

NASA Astrophysics Data System (ADS)

Das, Rabin; Mukhopadhyay, Sagarika; Singh, Ravi Kant; Baidya, Pushap R.

2018-07-01

Attenuation of seismic wave energy of Delhi and its surrounding regions has been estimated using coda of local earthquakes. Estimated quality factor (Qc) values are strongly dependent on frequency and lapse time. Frequency dependence of Qc has been estimated from the relationship Qc(f) = Q0fn for different lapse time window lengths. Q0 and n values vary from 73 to 453 and 0.97 to 0.63 for lapse time window lengths of 15 s to 90 s respectively. Average estimated frequency dependent relation is, Qc(f) = 135 ± 8f0.96±0.02 for the entire region for a window length of 30 s, where the average Qc value varies from 200 at 1.5 Hz to 1962 at 16 Hz. These values show that the region is seismically active and highly heterogeneous. The entire study region is divided into two sub-regions according to the geology of the area to investigate if there is a spatial variation in attenuation characteristics in this region. It is observed that at smaller lapse time both regions have similar Qc values. However, at larger lapse times the rate of increase of Qc with frequency is larger for Region 2 compared to Region 1. This is understandable, as it is closer to the tectonically more active Himalayan ranges and seismically more active compared to Region 1. The difference in variation of Qc with frequencies for the two regions is such that at larger lapse time and higher frequencies Region 2 shows higher Qc compared to Region 1. For lower frequencies the opposite situation is true. This indicates that there is a systematic variation in attenuation characteristics from the south (Region 1) to the north (Region 2) in the deeper part of the study area. This variation can be explained in terms of an increase in heat flow and a decrease in the age of the rocks from south to north.

Lost in Translation: Bioinformatic Analysis of Variations Affecting the Translation Initiation Codon in the Human Genome.

PubMed

Abad, Francisco; de la Morena-Barrio, María Eugenia; Fernández-Breis, Jesualdo Tomás; Corral, Javier

2018-06-01

Translation is a key biological process controlled in eukaryotes by the initiation AUG codon. Variations affecting this codon may have pathological consequences by disturbing the correct initiation of translation. Unfortunately, there is no systematic study describing these variations in the human genome. Moreover, we aimed to develop new tools for in silico prediction of the pathogenicity of gene variations affecting AUG codons, because to date, these gene defects have been wrongly classified as missense. Whole-exome analysis revealed the mean of 12 gene variations per person affecting initiation codons, mostly with high (> 0:01) minor allele frequency (MAF). Moreover, analysis of Ensembl data (December 2017) revealed 11,261 genetic variations affecting the initiation AUG codon of 7,205 genes. Most of these variations (99.5%) have low or unknown MAF, probably reflecting deleterious consequences. Only 62 variations had high MAF. Genetic variations with high MAF had closer alternative AUG downstream codons than did those with low MAF. Besides, the high-MAF group better maintained both the signal peptide and reading frame. These differentiating elements could help to determine the pathogenicity of this kind of variation. Data and scripts in Perl and R are freely available at https://github.com/fanavarro/hemodonacion. jfernand@um.es. Supplementary data are available at Bioinformatics online.

How sensitivity to ongoing interaural temporal disparities is affected by manipulations of temporal features of the envelopes of high-frequency stimuli

PubMed Central

Bernstein, Leslie R.; Trahiotis, Constantine

2009-01-01

This study addressed how manipulating certain aspects of the envelopes of high-frequency stimuli affects sensitivity to envelope-based interaural temporal disparities (ITDs). Listener’s threshold ITDs were measured using an adaptive two-alternative paradigm employing “raised-sine” stimuli [John, M. S., et al. (2002). Ear Hear. 23, 106–117] which permit independent variation in their modulation frequency, modulation depth, and modulation exponent. Threshold ITDs were measured while manipulating modulation exponent for stimuli having modulation frequencies between 32 and 256 Hz. The results indicated that graded increases in the exponent led to graded decreases in envelope-based threshold ITDs. Threshold ITDs were also measured while parametrically varying modulation exponent and modulation depth. Overall, threshold ITDs decreased with increases in the modulation depth. Unexpectedly, increases in the exponent of the raised-sine led to especially large decreases in threshold ITD when the modulation depth was low. An interaural correlation-based model was generally able to capture changes in threshold ITD stemming from changes in the exponent, depth of modulation, and frequency of modulation of the raised-sine stimuli. The model (and several variations of it), however, could not account for the unexpected interaction between the value of raised-sine exponent and its modulation depth. PMID:19425666

On the relation between activity-related frequency shifts and the sunspot distribution over the solar cycle 23

NASA Astrophysics Data System (ADS)

Santos, Ângela R. G.; Cunha, Margarida S.; Avelino, Pedro P.; Chaplin, William J.; Campante, Tiago L.

2017-10-01

The activity-related variations in the solar acoustic frequencies have been known for 30 years. However, the importance of the different contributions is still not well established. With this in mind, we developed an empirical model to estimate the spot-induced frequency shifts, which takes into account the sunspot properties, such as area and latitude. The comparison between the model frequency shifts obtained from the daily sunspot records and those observed suggests that the contribution from a stochastic component to the total frequency shifts is about 30%. The remaining 70% is related to a global, long-term variation. We also propose a new observable to investigate the short-and mid-term variations of the frequency shifts, which is insensitive to the long-term variations contained in the data. On the shortest time scales the variations in the frequency shifts are strongly correlated with the variations in the total area covered by sunspots. However, a significant loss of correlation is still found, which cannot be fully explained by ignoring the invisible side of the Sun when accounting for the total sunspot area. We also verify that the times when the frequency shifts and the sunspot areas do not vary in a similar way tend to coincide with the times of the maximum amplitude of the quasi-biennial variations found in the seismic data.

Global and disease-associated genetic variation in the human Fanconi anemia gene family.

PubMed

Rogers, Kai J; Fu, Wenqing; Akey, Joshua M; Monnat, Raymond J

2014-12-20

Fanconi anemia (FA) is a human recessive genetic disease resulting from inactivating mutations in any of 16 FANC (Fanconi) genes. Individuals with FA are at high risk of developmental abnormalities, early bone marrow failure and leukemia. These are followed in the second and subsequent decades by a very high risk of carcinomas of the head and neck and anogenital region, and a small continuing risk of leukemia. In order to characterize base pair-level disease-associated (DA) and population genetic variation in FANC genes and the segregation of this variation in the human population, we identified 2948 unique FANC gene variants including 493 FA DA variants across 57,240 potential base pair variation sites in the 16 FANC genes. We then analyzed the segregation of this variation in the 7578 subjects included in the Exome Sequencing Project (ESP) and the 1000 Genomes Project (1KGP). There was a remarkably high frequency of FA DA variants in ESP/1KGP subjects: at least 1 FA DA variant was identified in 78.5% (5950 of 7578) individuals included in these two studies. Six widely used functional prediction algorithms correctly identified only a third of the known, DA FANC missense variants. We also identified FA DA variants that may be good candidates for different types of mutation-specific therapies. Our results demonstrate the power of direct DNA sequencing to detect, estimate the frequency of and follow the segregation of deleterious genetic variation in human populations. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Genetic variation in resistance to blast (Pyricularia oryzae Cavara) in rice (Oryza sativa L.) germplasms of Bangladesh

PubMed Central

Khan, Mohammad Ashik Iqbal; Latif, Mohammad Abdul; Khalequzzaman, Mohammad; Tomita, Asami; Ali, Mohammad Ansar; Fukuta, Yoshimichi

2017-01-01

Genetic variation in blast resistance was clarified in 334 Bangladesh rice accessions from 4 major ecotypes (Aus, Aman, Boro and Jhum). Cluster analysis of polymorphism data of 74 SSR markers separated these accessions into cluster I (corresponding to the Japonica Group) and cluster II (corresponding to the Indica Group). Cluster II accessions were represented with high frequency in all ecotypes. Cluster II was further subdivided into subclusters IIa and IIb. Subcluster IIa accessions were represented with high frequency in only Aus and Jhum ecotypes. Cluster I accessions were more frequent in the Aman ecotype than in other ecotypes. Distinct variations in resistance were found, and accessions were classified into 4 groups (A1, A2, B1 and B2) based on their reactions to standard differential blast isolates. The most susceptible group was A2 (which included susceptible variety Lijiangxintuanheigu, most of the differential varieties, and a few Bangladesh accessions), followed in order by A1, B2 and B1 (the most resistant). Accessions from 4 ecotypes fell with different frequencies into each of these resistance groups. These results demonstrated that Japonica Group accessions were found mainly in Aman, and Indica Group accessions were distributed across all ecotypes. Susceptible accessions were limited in Aus and Aman. PMID:29398943

Noninvasive Quantitative Imaging of Collagen Microstructure in Three-Dimensional Hydrogels Using High-Frequency Ultrasound

PubMed Central

Mercado, Karla P.; Helguera, María; Hocking, Denise C.

2015-01-01

Collagen I is widely used as a natural component of biomaterials for both tissue engineering and regenerative medicine applications. The physical and biological properties of fibrillar collagens are strongly tied to variations in collagen fiber microstructure. The goal of this study was to develop the use of high-frequency quantitative ultrasound to assess collagen microstructure within three-dimensional (3D) hydrogels noninvasively and nondestructively. The integrated backscatter coefficient (IBC) was employed as a quantitative ultrasound parameter to detect, image, and quantify spatial variations in collagen fiber density and diameter. Collagen fiber microstructure was varied by fabricating hydrogels with different collagen concentrations or polymerization temperatures. IBC values were computed from measurements of the backscattered radio-frequency ultrasound signals collected using a single-element transducer (38-MHz center frequency, 13–47 MHz bandwidth). The IBC increased linearly with increasing collagen concentration and decreasing polymerization temperature. Parametric 3D images of the IBC were generated to visualize and quantify regional variations in collagen microstructure throughout the volume of hydrogels fabricated in standard tissue culture plates. IBC parametric images of corresponding cell-embedded collagen gels showed cell accumulation within regions having elevated collagen IBC values. The capability of this ultrasound technique to noninvasively detect and quantify spatial differences in collagen microstructure offers a valuable tool to monitor the structural properties of collagen scaffolds during fabrication, to detect functional differences in collagen microstructure, and to guide fundamental research on the interactions of cells and collagen matrices. PMID:25517512

Noninvasive Quantitative Imaging of Collagen Microstructure in Three-Dimensional Hydrogels Using High-Frequency Ultrasound.

PubMed

Mercado, Karla P; Helguera, María; Hocking, Denise C; Dalecki, Diane

2015-07-01

Collagen I is widely used as a natural component of biomaterials for both tissue engineering and regenerative medicine applications. The physical and biological properties of fibrillar collagens are strongly tied to variations in collagen fiber microstructure. The goal of this study was to develop the use of high-frequency quantitative ultrasound to assess collagen microstructure within three-dimensional (3D) hydrogels noninvasively and nondestructively. The integrated backscatter coefficient (IBC) was employed as a quantitative ultrasound parameter to detect, image, and quantify spatial variations in collagen fiber density and diameter. Collagen fiber microstructure was varied by fabricating hydrogels with different collagen concentrations or polymerization temperatures. IBC values were computed from measurements of the backscattered radio-frequency ultrasound signals collected using a single-element transducer (38-MHz center frequency, 13-47 MHz bandwidth). The IBC increased linearly with increasing collagen concentration and decreasing polymerization temperature. Parametric 3D images of the IBC were generated to visualize and quantify regional variations in collagen microstructure throughout the volume of hydrogels fabricated in standard tissue culture plates. IBC parametric images of corresponding cell-embedded collagen gels showed cell accumulation within regions having elevated collagen IBC values. The capability of this ultrasound technique to noninvasively detect and quantify spatial differences in collagen microstructure offers a valuable tool to monitor the structural properties of collagen scaffolds during fabrication, to detect functional differences in collagen microstructure, and to guide fundamental research on the interactions of cells and collagen matrices.

High frequency responses of nanoplankton and microplankton to wind-driven upwelling off northern Chile

NASA Astrophysics Data System (ADS)

Aguilera, Victor; Escribano, Ruben; Herrera, Liliana

2009-08-01

Autotrophic and heterotrophic nanoplankton and microplankton vary widely in quantity and composition in coastal upwelling zones, causing a highly heterogeneous distribution of food resources for higher trophic levels. Here, we assessed daily changes in size-fractioned biomass and community structure of nanoplankton and microplankton at two upwelling sites off northern Chile, Mejillones (23°S) and Chipana (21°S), during summer 2006, winter 2006 and summer 2007 as related to changes in oceanographic conditions upon upwelling variation. We found highly-significant changes in quantity and community structure (species diversity and richness) of both nanoplankton and microplankton fractions after 3-5 days of observations. These changes were coupled to an intermittent upwelling regime reflected in the alongshore component of the wind. After a few days the whole community was modified in terms of species and size structure. Over-imposing this variability, during winter 2006 there was a strong perturbation of remote origin that substantially impacted temperature, oxygenation and stratification of the water column. This "abnormal" warming event altered the upwelling regime, but its impact on abundance and composition of the nanoplankton and microplankton fractions was uncertain. Over the short-time scale however, we found a strong coupling between daily changes in the alongshore component of wind and nanoplankton and microplankton abundances and their structure. All these findings indicate that despite the high biological productivity of this upwelling region, high frequency variation induced by wind forcing may be a major regulator of food resources (quantity and quality) for primary consumers, such as zooplankton, fish larvae and benthic organisms in the near-shore area. This high frequency variation may also impose a key constrain for prey-predator encounter rates and survival of short-lived zooplankton and invertebrate and fish larvae in the upwelling zone.

Correction for reflected sky radiance in low-altitude coastal hyperspectral images.

PubMed

Kim, Minsu; Park, Joong Yong; Kopilevich, Yuri; Tuell, Grady; Philpot, William

2013-11-10

Low-altitude coastal hyperspectral imagery is sensitive to reflections of sky radiance at the water surface. Even in the absence of sun glint, and for a calm water surface, the wide range of viewing angles may result in pronounced, low-frequency variations of the reflected sky radiance across the scan line depending on the solar position. The variation in reflected sky radiance can be obscured by strong high-spatial-frequency sun glint and at high altitude by path radiance. However, at low altitudes, the low-spatial-frequency sky radiance effect is frequently significant and is not removed effectively by the typical corrections for sun glint. The reflected sky radiance from the water surface observed by a low-altitude sensor can be modeled in the first approximation as the sum of multiple-scattered Rayleigh path radiance and the single-scattered direct-solar-beam radiance by the aerosol in the lower atmosphere. The path radiance from zenith to the half field of view (FOV) of a typical airborne spectroradiometer has relatively minimal variation and its reflected radiance to detector array results in a flat base. Therefore the along-track variation is mostly contributed by the forward single-scattered solar-beam radiance. The scattered solar-beam radiances arrive at the water surface with different incident angles. Thus the reflected radiance received at the detector array corresponds to a certain scattering angle, and its variation is most effectively parameterized using the downward scattering angle (DSA) of the solar beam. Computation of the DSA must account for the roll, pitch, and heading of the platform and the viewing geometry of the sensor along with the solar ephemeris. Once the DSA image is calculated, the near-infrared (NIR) radiance from selected water scan lines are compared, and a relationship between DSA and NIR radiance is derived. We then apply the relationship to the entire DSA image to create an NIR reference image. Using the NIR reference image and an atmospheric spectral reflectance look-up table, the low spatial frequency variation of the water surface-reflected atmospheric contribution is removed.

Spatial variation of crustal coda Q in California

USGS Publications Warehouse

Philips, W.S.; Lee, W.H.K.; Newberry, J.T.

1988-01-01

Coda wave data from California microearthquakes were studied in order to delineate regional fluctuations of apparent crustal attenuation in the band 1.5 to 24 Hz. Apparent attenuation was estimated using a single back scattering model of coda waves. The coda wave data were restricted to ???30 s following the origin time; this insures that crustal effects dominate the results as the backscattered shear waves thought to form the coda would not have had time to penetrate much deeper. Results indicate a strong variation in apparent crustal attenuation at high frequencies between the Franciscan and Salinian regions of central California and the Long Valley area of the Sierra Nevada. Although the coda Q measurements coincide at 1.5 Hz (Qc=100), at 24 Hz there is a factor of four difference between the measurements made in Franciscan (Qc=525) and Long Valley (Qc=2100) with the Salinian midway between (Qc=900). These are extremely large variations compared to measures of seismic velocities of comparable resolution, demonstrating the exceptional sensitivity of the high frequency coda Q measurement to regional geology. In addition, the frequency trend of the results is opposite to that seen in a compilation of coda Q measurements made worldwide by other authors which tend to converge at high and diverge at low frequencies, however, the worldwide results generally were obtained without limiting the coda lengths and probably reflect upper mantle rather than crustal properties. Our results match those expected due to scattering in random media represented by Von Karman autocorrelation functions of orders 1/2 to 1/3. The Von Karman medium of order 1/3 corresponding to the Franciscan coda Q measurement contains greater amounts of high wavenumber fluctuations. This indicates relatively large medium fluctuations with wavelengths on the order of 100 m in the highly deformed crust associated with the Franciscan, however, the influence of scattering on the coda Q measurement is currently a matter of controversy. ?? 1988 Birkha??user Verlag.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bissa, Shivangi; Naruka, Preeti; Bishnoi, Nidhi

In the present study the dielectric optical response of various nanostructures of ZnO deposited on silica substrate has been studied using Maxwell-Garnett Effective Medium Theory. Using the volume filling factors for different nanostructures of ZnO the effective dielectric constant has been evaluated. The variation of this effective dielectric constant with the frequency of applied signal has been investigated. Moreover, the reflectance of the film, power absorption and variation of refractive index with frequency has been studied. The results obtained show that the quantum confinement effects in ZnO nano-structural films deposited on silica substrate give rise to distinct optical properties makingmore » it an ideal choice for high power THz generation.« less

Spatial Variations of Poloidal and Toroidal Mode Field Line Resonances Observed by MMS

NASA Astrophysics Data System (ADS)

Le, G.; Chi, P. J.; Strangeway, R. J.; Russell, C. T.; Slavin, J. A.; Anderson, B. J.; Kepko, L.; Nakamura, R.; Plaschke, F.; Torbert, R. B.

2017-12-01

Field line resonances (FLRs) are magnetosphere's responses to solar wind forcing and internal instabilities generated by solar wind-magnetospheric interactions. They are standing waves along the Earth's magnetic field lines oscillating in either poloidal or toroidal modes. The two types of waves have their unique frequency characteristics. The eigenfrequency of FLRs is determined by the length of the field line and the plasma density, and thus gradually changes with L. For toroidal mode oscillations with magnetic field perturbations in the azimuthal direction, ideal MHD predicts that each field line oscillates independently with its own eigenfrequency. For poloidal mode waves with field lines oscillating radially, their frequency cannot change with L easily as L shells need to oscillate in sync to avoid efficient damping due to phase mixing. Observations, mainly during quiet times, indeed show that poloidal mode waves often exhibit nearly constant frequency across L shells. Our recent observations, on the other hand, reveal a clear L-dependent frequency trend for a long lasting storm-time poloidal wave event, indicating the wave can maintain its power with changing frequencies for an extended period [Le et al., 2017]. The spatial variation of the frequency shows discrete spatial structures. The frequency remains constant within each discrete structure that spans about 1 REalong L, and changes discretely. We present a follow-up study to investigate spatial variations of wave frequencies using the Wigner-Ville distribution. We examine both poloidal and toroidal waves under different geomagnetic conditions using multipoint observations from MMS, and compare their frequency and occurrence characteristics for insights into their generation mechanisms. Reference: Le, G., et al. (2017), Global observations of magnetospheric high-m poloidal waves during the 22 June 2015 magnetic storm, Geophys. Res. Lett., 44, 3456-3464, doi:10.1002/2017GL073048.

Coupling and tuning of modal frequencies in direct current biased microelectromechanical systems arrays

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kambali, Prashant N.; Swain, Gyanadutta; Pandey, Ashok Kumar, E-mail: ashok@iith.ac.in

2015-08-10

Understanding the coupling of different modal frequencies and their tuning mechanisms has become essential to design multi-frequency MEMS devices. In this work, we fabricate a MEMS beam with fixed boundaries separated from two side electrodes and a bottom electrode. Subsequently, we perform experiments to obtain the frequency variation of in-plane and out-of-plane mechanical modes of the microbeam with respect to both DC bias and laser heating. We show that the frequencies of the two modes coincide at a certain DC bias, which in turn can also be varied due to temperature. Subsequently, we develop a theoretical model to predict themore » variation of the two modes and their coupling due to a variable gap between the microbeam and electrodes, initial tension, and fringing field coefficients. Finally, we discuss the influence of frequency tuning parameters in arrays of 3, 33, and 40 microbeams, respectively. It is also found that the frequency bandwidth of a microbeam array can be increased to as high as 25 kHz for a 40 microbeam array with a DC bias of 80 V.« less

Plasmodium vivax circumsporozoite genotypes: a limited variation or new subspecies with major biological consequences?

PubMed Central

2010-01-01

Background Plasmodium vivax circumsporozoite variants have been identified in several geographical areas. The real implication of the genetic variation in this region of the P. vivax genome has been questioned for a long time. Although previous studies have observed significant association between VK210 and the Duffy blood group, we present here that evidences of this variation are limited to the CSP central portion. Methods The phylogenetic analyses were accomplished starting from the amplification of conserved domains of 18 SSU RNAr and Cyt B. The antibodies responses against the CSP peptides, MSP-1, AMA-1 and DBP were detected by ELISA, in plasma samples of individuals infected with two P. vivax CS genotypes: VK210 and P. vivax-like. Results These analyses of the two markers demonstrate high similarity among the P. vivax CS genotypes and surprisingly showed diversity equal to zero between VK210 and P. vivax-like, positioning these CS genotypes in the same clade. A high frequency IgG antibody against the N- and C-terminal regions of the P. vivax CSP was found as compared to the immune response to the R- and V- repetitive regions (p = 0.0005, Fisher's Exact test). This difference was more pronounced when the P. vivax-like variant was present in the infection (p = 0.003, Fisher's Exact test). A high frequency of antibody response against MSP-1 and AMA-1 peptides was observed for all P. vivax CS genotypes in comparison to the same frequency for DBP. Conclusions This results target that the differences among the P. vivax CS variants are restrict to the central repeated region of the protein, mostly nucleotide variation with important serological consequences. PMID:20573199

Genetic variation among the Mapuche Indians from the Patagonian region of Argentina: mitochondrial DNA sequence variation and allele frequencies of several nuclear genes.

PubMed

Ginther, C; Corach, D; Penacino, G A; Rey, J A; Carnese, F R; Hutz, M H; Anderson, A; Just, J; Salzano, F M; King, M C

1993-01-01

DNA samples from 60 Mapuche Indians, representing 39 maternal lineages, were genetically characterized for (1) nucleotide sequences of the mtDNA control region; (2) presence or absence of a nine base duplication in mtDNA region V; (3) HLA loci DRB1 and DQA1; (4) variation at three nuclear genes with short tandem repeats; and (5) variation at the polymorphic marker D2S44. The genetic profile of the Mapuche population was compared to other Amerinds and to worldwide populations. Two highly polymorphic portions of the mtDNA control region, comprising 650 nucleotides, were amplified by the polymerase chain reaction (PCR) and directly sequenced. The 39 maternal lineages were defined by two or three generation families identified by the Mapuches. These 39 lineages included 19 different mtDNA sequences that could be grouped into four classes. The same classes of sequences appear in other Amerinds from North, Central, and South American populations separated by thousands of miles, suggesting that the origin of the mtDNA patterns predates the migration to the Americas. The mtDNA sequence similarity between Amerind populations suggests that the migration throughout the Americas occurred rapidly relative to the mtDNA mutation rate. HLA DRB1 alleles 1602 and 1402 were frequent among the Mapuches. These alleles also occur at high frequency among other Amerinds in North and South America, but not among Spanish, Chinese or African-American populations. The high frequency of these alleles throughout the Americas, and their specificity to the Americas, supports the hypothesis that Mapuches and other Amerind groups are closely related.(ABSTRACT TRUNCATED AT 250 WORDS)

Fourier Spot Volatility Estimator: Asymptotic Normality and Efficiency with Liquid and Illiquid High-Frequency Data

PubMed Central

2015-01-01

The recent availability of high frequency data has permitted more efficient ways of computing volatility. However, estimation of volatility from asset price observations is challenging because observed high frequency data are generally affected by noise-microstructure effects. We address this issue by using the Fourier estimator of instantaneous volatility introduced in Malliavin and Mancino 2002. We prove a central limit theorem for this estimator with optimal rate and asymptotic variance. An extensive simulation study shows the accuracy of the spot volatility estimates obtained using the Fourier estimator and its robustness even in the presence of different microstructure noise specifications. An empirical analysis on high frequency data (U.S. S&P500 and FIB 30 indices) illustrates how the Fourier spot volatility estimates can be successfully used to study intraday variations of volatility and to predict intraday Value at Risk. PMID:26421617

Frequency modulation of high-order harmonic generation in an orthogonally polarized two-color laser field.

PubMed

Li, Guicun; Zheng, Yinghui; Ge, Xiaochun; Zeng, Zhinan; Li, Ruxin

2016-08-08

We have experimentally investigated the frequency modulation of high-order harmonics in an orthogonally polarized two-color laser field consisting of a mid-infrared 1800nm fundamental pulse and its second harmonic pulse. It is demonstrated that the high harmonic spectra can be fine-tuned as we slightly change the relative delay of the two-color laser pulses. By analyzing the relative frequency shift of each harmonic at different two-color delays, the nonadiabatic spectral shift induced by the rapid variation of the intensity-dependent intrinsic dipole phase can be distinguished from the blueshift induced by the change of the refractive index during self-phase modulation (SPM). Our comprehensive analysis shows that the frequency modulation pattern is a reflection of the average emission time of high-order harmonic generation (HHG), thus offering a simple method to fine-tune the spectra of the harmonics on a sub-cycle time scale.

Focusing homologous recombination: pilin antigenic variation in the pathogenic Neisseria

PubMed Central

Cahoon, Laty A.; Seifert, H. Steven

2011-01-01

Summary Some pathogenic microbes utilize homologous recombination to generate antigenic variability in targets of immune surveillance. These specialized systems rely on the cellular recombination machinery to catalyze dedicated, high-frequency reactions that provide extensive diversity in the genes encoding surface antigens. A description of the specific mechanisms that allow unusually high rates of recombination without deleterious effects on the genome in the well characterized pilin antigenic variation systems of Neisseria gonorrhoeae and Neisseria meningitidis is presented. We will also draw parallels to selected bacterial and eukaryotic antigenic variation systems, and suggest the most pressing unanswered questions related to understanding these important processes. PMID:21812841

Respiratory sinus arrhythmia stabilizes mean arterial blood pressure at high-frequency interval in healthy humans.

PubMed

Elstad, Maja; Walløe, Lars; Holme, Nathalie L A; Maes, Elke; Thoresen, Marianne

2015-03-01

Arterial blood pressure variations are an independent risk factor for end organ failure. Respiratory sinus arrhythmia (RSA) is a sign of a healthy cardiovascular system. However, whether RSA counteracts arterial blood pressure variations during the respiratory cycle remains controversial. We restricted normal RSA with non-invasive intermittent positive pressure ventilation (IPPV) to test the hypothesis that RSA normally functions to stabilize mean arterial blood pressure. Ten young volunteers were investigated during metronome-paced breathing and IPPV. Heart rate (ECG), mean arterial blood pressure and left stroke volume (finger arterial pressure curve) and right stroke volume (pulsed ultrasound Doppler) were recorded, while systemic and pulmonary blood flow were calculated beat-by-beat. Respiratory variations (high-frequency power, 0.15-0.40 Hz) in cardiovascular variables were estimated by spectral analysis. Phase angles and correlation were calculated by cross-spectral analysis. The magnitude of RSA was reduced from 4.9 bpm(2) (95% CI 3.0, 6.2) during metronome breathing to 2.8 bpm(2) (95% CI 1.1, 5.0) during IPPV (p = 0.03). Variations in mean arterial blood pressure were greater (2.3 mmHg(2) (95% CI 1.4, 3.9) during IPPV than during metronome breathing (1.0 mmHg(2) [95% CI 0.7, 1.3]) (p = 0.014). Respiratory variations in right and left stroke volumes were inversely related in the respiratory cycle during both metronome breathing and IPPV. RSA magnitude is lower and mean arterial blood pressure variability is greater during IPPV than during metronome breathing. We conclude that in healthy humans, RSA stabilizes mean arterial blood pressure at respiratory frequency.

Physics of systematic frequency variations in hydrogen masers

NASA Technical Reports Server (NTRS)

Mattison, Edward M.

1990-01-01

The frequency stability of hydrogen masers for intervals longer that 10(exp 4) seconds is limited at present by systematic processes. Researchers discuss the physics of frequency-determining mechanisms internal to the maser that are susceptible to systematic variations, and the connections between these internal mechanisms and external environmental factors. Based upon estimates of the magnitudes of systematic effects, they find that the primary internal mechanisms currently limiting long-term maser frequency stability are cavity pulling, at the level parts in 10(exp 15) per day, and wall shift variations, at the level of parts in 10(exp 16) to parts in 10(exp 15) per day. They discuss strategies for reducing systematic frequency variations.

Physics of systematic frequency variations in hydrogen masers

NASA Technical Reports Server (NTRS)

Mattison, Edward M.

1992-01-01

The frequency stability of hydrogen masers for intervals longer than 10 exp 4 s is currently limited by systematic processes. The physics of frequency-determining mechanisms internal to the maser that are susceptible to systematic variations, and the connections between these internal mechanisms and external environmental factors are discussed. From estimates of the magnitudes of systematic effects, it is found that the primary internal mechanisms limiting long-term maser frequency stability are cavity pulling, at the level of parts in 1015 per day, and wall shift variations, at the level of parts in 10 exp 16 to parts in 10 exp 15 per day. Strategies for reducing systematic frequency variations are discussed.

Variations in otological presentation of lightning strike victims: Clinical report of 3 patients.

PubMed

Kılıç, Erbil; Genç, Hakan; Aydın, Ümit; Aşık, Burak; Satar, Bülent

2017-03-01

Lightning strike can cause fatal or nonfatal injuries. Some nonfatal injuries are associated with otological symptoms and findings. Conductive hearing loss due to rupture of the tympanic membrane is the most common audiovestibular lesion of lightning strike. Various forms of sensorineural hearing loss and dizziness have also been reported. Presently described are 3 cases of lightning strike injury. First patient had mid-frequency hearing loss in right ear and high frequency sensorineural hearing loss in left ear. Second patient had high frequency sensorineural hearing loss in left ear, and the third had peripheral facial palsy with perilymphatic fistula on same side. This is the first documented case of mid-frequency hearing loss occurring after lightning strike.

Evaluation of adhesive-free crossed-electrode poly(vinylidene fluoride) copolymer array transducers for high frequency imaging

NASA Astrophysics Data System (ADS)

Wagle, Sanat; Decharat, Adit; Habib, Anowarul; Ahluwalia, Balpreet S.; Melandsø, Frank

2016-07-01

High frequency crossed-electrode transducers have been investigated, both as single and dual layer transducers. Prototypes of these transducers were developed for 4 crossed lines (yielding 16 square elements) on a polymer substrate, using a layer-by-layer deposition method for poly(vinylidene fluoride-trifluoroethylene) [P(VDF-TrFE)] with intermediate sputtered electrodes. The transducer was characterized using various methods [LCR analyzer, a pulse-echo experimental setup, and a numerical Finite element method (FEM) model] and evaluated in terms of uniformity of bandwidth and acoustical energy output. All 16 transducer elements produced broad-banded ultrasonic spectra with small variation in central frequency and -6 dB bandwidth. The frequency responses obtained experimentally were verified using a numerical model.

Upgrading a high-throughput spectrometer for high-frequency (<400 kHz) measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nishizawa, T., E-mail: nishizawa@wisc.edu; Nornberg, M. D.; Den Hartog, D. J.

2016-11-15

The upgraded spectrometer used for charge exchange recombination spectroscopy on the Madison Symmetric Torus resolves emission fluctuations up to 400 kHz. The transimpedance amplifier’s cutoff frequency was increased based upon simulations comparing the change in the measured photon counts for time-dynamic signals. We modeled each signal-processing stage of the diagnostic and scanned the filtering frequency to quantify the uncertainty in the photon counting rate. This modeling showed that uncertainties can be calculated based on assuming each amplification stage is a Poisson process and by calibrating the photon counting rate with a DC light source to address additional variation.

Upgrading a high-throughput spectrometer for high-frequency (<400 kHz) measurements

NASA Astrophysics Data System (ADS)

Nishizawa, T.; Nornberg, M. D.; Den Hartog, D. J.; Craig, D.

2016-11-01

The upgraded spectrometer used for charge exchange recombination spectroscopy on the Madison Symmetric Torus resolves emission fluctuations up to 400 kHz. The transimpedance amplifier's cutoff frequency was increased based upon simulations comparing the change in the measured photon counts for time-dynamic signals. We modeled each signal-processing stage of the diagnostic and scanned the filtering frequency to quantify the uncertainty in the photon counting rate. This modeling showed that uncertainties can be calculated based on assuming each amplification stage is a Poisson process and by calibrating the photon counting rate with a DC light source to address additional variation.

Molecular Population Genetics of the Alcohol Dehydrogenase Gene Region of DROSOPHILA MELANOGASTER

PubMed Central

Aquadro, Charles F.; Desse, Susan F.; Bland, Molly M.; Langley, Charles H.; Laurie-Ahlberg, Cathy C.

1986-01-01

Variation in the DNA restriction map of a 13-kb region of chromosome II including the alcohol dehydrogenase structural gene (Adh) was examined in Drosophila melanogaster from natural populations. Detailed analysis of 48 D. melanogaster lines representing four eastern United States populations revealed extensive DNA sequence variation due to base substitutions, insertions and deletions. Cloning of this region from several lines allowed characterization of length variation as due to unique sequence insertions or deletions [nine sizes; 21–200 base pairs (bp)] or transposable element insertions (several sizes, 340 bp to 10.2 kb, representing four different elements). Despite this extensive variation in sequences flanking the Adh gene, only one length polymorphism is clearly associated with altered Adh expression (a copia element approximately 250 bp 5' to the distal transcript start site). Nonetheless, the frequency spectra of transposable elements within and between Drosophila species suggests they are slightly deleterious. Strong nonrandom associations are observed among Adh region sequence variants, ADH allozyme (Fast vs. Slow), ADH enzyme activity and the chromosome inversion ln(2L) t. Phylogenetic analysis of restriction map haplotypes suggest that the major twofold component of ADH activity variation (high vs. low, typical of Fast and Slow allozymes, respectively) is due to sequence variation tightly linked to and possibly distinct from that underlying the allozyme difference. The patterns of nucleotide and haplotype variation for Fast and Slow allozyme lines are consistent with the recent increase in frequency and spread of the Fast haplotype associated with high ADH activity. These data emphasize the important role of evolutionary history and strong nonrandom associations among tightly linked sequence variation as determinants of the patterns of variation observed in natural populations. PMID:3026893

Relative importance of precipitation frequency and intensity in inter-annual variation of precipitation in Singapore during 1980-2013

NASA Astrophysics Data System (ADS)

Li, Xin; Babovic, Vladan

2017-04-01

Observed studies on inter-annual variation of precipitation provide insight into the response of precipitation to anthropogenic climate change and natural climate variability. Inter-annual variation of precipitation results from the concurrent variations of precipitation frequency and intensity, understanding of the relative importance of frequency and intensity in the variability of precipitation can help fathom its changing properties. Investigation of the long-term changes of precipitation schemes has been extensively carried out in many regions across the world, however, detailed studies of the relative importance of precipitation frequency and intensity in inter-annual variation of precipitation are still limited, especially in the tropics. Therefore, this study presents a comprehensive framework to investigate the inter-annual variation of precipitation and the dominance of precipitation frequency and intensity in a tropical urban city-state, Singapore, based on long-term (1980-2013) daily precipitation series from 22 rain gauges. First, an iterative Mann-Kendall trend test method is applied to detect long-term trends in precipitation total, frequency and intensity at both annual and seasonal time scales. Then, the relative importance of precipitation frequency and intensity in inducing the inter-annual variation of wet-day precipitation total is analyzed using a dominance analysis method based on linear regression. The results show statistically significant upward trends in wet-day precipitation total, frequency and intensity at annual time scale, however, these trends are not evident during the monsoon seasons. The inter-annual variation of wet-day precipitation is mainly dominated by precipitation intensity for most of the stations at annual time scale and during the Northeast monsoon season. However, during the Southwest monsoon season, the inter-annual variation of wet-day precipitation is mainly dominated by precipitation frequency. These results have implications for water resources management practices in Singapore.

Noise-enhanced Parametric Resonance in Perturbed Galaxies

NASA Astrophysics Data System (ADS)

Sideris, Ioannis V.; Kandrup, Henry E.

2004-02-01

This paper describes how parametric resonances associated with a galactic potential subjected to relatively low-amplitude, strictly periodic time-dependent perturbations can be impacted by pseudo-random variations in the pulsation frequency, modeled as colored noise. One aim thereby is to allow for the effects of a changing oscillation frequency as the density distribution associated with a galaxy evolves during violent relaxation. Another is to mimic the possible effects of internal substructures, satellite galaxies, and/or a high-density environment. The principal conclusions are that allowing for a variable frequency does not vitiate the effects of parametric resonance, and that, in at least some cases, such variations can increase the overall importance of parametric resonance associated with systematic pulsations. In memory of Professor H. E. Kandrup, a brilliant scientist, excellent teacher, and good friend. His genius and sense of humor will be greatly missed.

Effects of Be acceptors on the spin polarization of carriers in p-i-n resonant tunneling diodes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Awan, I. T.; Galvão Gobato, Y.; Galeti, H. V. A.

In this paper, we have investigated the effect of Be acceptors on the electroluminescence and the spin polarization in GaAs/AlAs p-i-n resonant tunneling diodes. The quantum well emission comprise two main lines separated by ∼20 meV attributed to excitonic and Be-related transitions, which intensities show remarkably abrupt variations at critical voltages, particularly at the electron resonant peak where it shows a high-frequency bistability. The circular-polarization degree of the quantum-well electroluminescence also shows strong and abrupt variations at the critical bias voltages and it attains relatively large values (of ∼−75% at 15 T). These effects may be explored to design novel devices formore » spintronic applications such as a high-frequency spin-oscillators.« less

Effect of wafer geometry on lithography chucking processes

NASA Astrophysics Data System (ADS)

Turner, Kevin T.; Sinha, Jaydeep K.

2015-03-01

Wafer flatness during exposure in lithography tools is critical and is becoming more important as feature sizes in devices shrink. While chucks are used to support and flatten the wafer during exposure, it is essential that wafer geometry be controlled as well. Thickness variations of the wafer and high-frequency wafer shape components can lead to poor flatness of the chucked wafer and ultimately patterning problems, such as defocus errors. The objective of this work is to understand how process-induced wafer geometry, resulting from deposited films with non-uniform stress, can lead to high-frequency wafer shape variations that prevent complete chucking in lithography scanners. In this paper, we discuss both the acceptable limits of wafer shape that permit complete chucking to be achieved, and how non-uniform residual stresses in films, either due to patterning or process non-uniformity, can induce high spatial frequency wafer shape components that prevent chucking. This paper describes mechanics models that relate non-uniform film stress to wafer shape and presents results for two example cases. The models and results can be used as a basis for establishing control strategies for managing process-induced wafer geometry in order to avoid wafer flatness-induced errors in lithography processes.

Amplitude Variation of Bottom Simulating Reflection with Respect to Frequency - Transitional Base or Attenuation?

USGS Publications Warehouse

Lee, Myung W.

2007-01-01

The amplitude of a bottom simulating reflection (BSR), which occurs near the phase boundary between gas hydrate-bearing sediments and underlying gas-filled sediments, strongly depends on the frequency content of a seismic signal, as well as the impedance contrast across the phase boundary. A strong-amplitude BSR, detectable in a conventional seismic profile, is a good indicator of the presence of free gas beneath the phase boundary. However, the BSR as observed in low-frequency multichannel seismic data is generally difficult to identify in high-frequency, single-channel seismic data. To investigate the frequency dependence of BSR amplitudes, single-channel seismic data acquired with an air gun source at Blake Ridge, which is located off the shore of South Carolina, were analyzed in the frequency range of 10-240 Hz. The frequency-dependent impedance contrast caused by the velocity dispersion in partially gas saturated sediments is important to accurately analyze BSR amplitude. Analysis indicates that seismic attenuation of gas hydrate-bearing sediments, velocity dispersion, and a transitional base all contribute to the frequency-dependent BSR amplitude variation in the frequency range of 10-500 Hz. When velocity dispersion is incorporated into the BSR amplitude analysis, the frequency-dependent BSR amplitude at Blake Ridge can be explained with gas hydrate-bearing sediments having a quality factor of about 250 and a transitional base with a thickness of about 1 meter.

Frequencies and Characteristics of Global Oceanic Precipitation from Shipboard Present-Weather Reports

NASA Technical Reports Server (NTRS)

Petty, Grant W.

1995-01-01

Ship reports of present weather obtained from the Comprehensive Ocean-Atmosphere Data Set are analyzed for the period 1958-91 in order to elucidate regional and seasonal variations in the climatological frequency, phase, intensity, and character of oceanic precipitation. Specific findings of note include the following: 1) The frequency of thunderstorm reports, relative to all precipitation reports, is a strong function of location, with thunderstorm activity being favored within 1000-3000 km of major tropical and subtropical land masses, while being quite rare at other locations, even within the intertropical convergence zone. 2) The latitudinal frequency of precipitation over the southern oceans increases steadily toward the Antarctic continent and shows relatively little seasonal variation. The frequency of convective activity, however, shows considerable seasonal variability, with sharp winter maxima occurring near 38 deg. latitude in both hemispheres. 3) Drizzle is the preferred form of precipitation in a number of regions, most of which coincide with known regions of persistent marine stratus and stratocumulus in the subtropical highs. Less well documented is the high relative frequency of drizzle in the vicinity of the equatorial sea surface temperature front in the eastern Pacific. 4) Regional differences in the temporal scale of precipitation events (e.g., transient showers versus steady precipitation) are clearly depicted by way of the ratio of the frequency of precipitation at the observation time to the frequency of all precipitation reports, including precipitation during the previous hour. The results of this study suggest that many current satellite rainfall estimation techniques may substantially underestimate the fractional coverage or frequency of precipitation poleward of 50 deg. latitude and in the subtropical dry zones. They also draw attention to the need to carefully account for regional differences in the physical and spatial properties of rainfall when developing calibration relationships for satellite algorithms.

Investigating the effect of previous treatments on wheat biomass over multiple spatial frequencies

NASA Astrophysics Data System (ADS)

Milne, A. E.; Castellanos, M. T.; Cartagena, M. C.; Tarquis, A. M.; Lark, R. M.

2010-09-01

In this study we use the maximum overlap discrete packet transform (MODWPT) to investigate residual effects on wheat biomass of fertigation treatments applied to a previous crop. The wheat crop covered nine subplots from a previous experiment on melon response to fertigation. Each subplot had previously received a different level of applied nitrogen. Many factors affect wheat biomass, causing it to vary at different spatial frequencies. We hypothesize that these will include residual effects from fertilizer application (at relatively low spatial frequencies) and the local influence of individual plants from the previous melon crop (at high frequency). To test this hypothesis we use the MODWPT to identify the dominant spatial frequencies of wheat biomass variation, and analyse the relationship to both the previous fertilizer application and the location of individual melon plants in the previous crop. The MODWPT is particularly appropriate for this because it allows us first to identify the key spatial frequencies in the wheat biomass objectively and to analyse them, and their relationship to hypothesized driving factors without any assumptions of uniformity (stationarity) of wheat-biomass variation. The results showed that the applied nitrogen dominated the wheat biomass response, and that there was a noticeable component of wheat-biomass variation at the spatial frequency that corresponds to the melon cropping. We expected wheat biomass to be negatively correlated with the position of melons in the previous crop, due to uptake of the applied nitrogen. The MODWPT, which allows us to detect changes in correlation between variables at different frequencies, showed that such a relationship was found across part of the experiment but not uniformly.

Evaluation of discrete frequency sound in closed-test-section wind tunnels

NASA Technical Reports Server (NTRS)

Mosher, Marianne

1990-01-01

The principal objective of this study is to assess the adequacy of linear acoustic theory with an impedance wall boundary condition for modeling the detailed sound field of an acoustic source in a duct. This study compares measurements and calculations of a simple acoustic source in a rectangular concrete duct lined with foam on the walls and anechoic end terminations. Measuring acoustic pressure for 12 wave numbers provides variation in frequency and absorption characteristics of the duct walls. The cases in this study contain low frequencies and low wall absorptions corresponding to measurements of low-frequency helicopter noise in a lined wind tunnel. This regime is particularly difficult to measure in wind tunnels due to high levels of the reverberant field relatively close to the source. Close to the source, where the interference of wall reflections is minimal, correlation is very good. Away from the source, correlation degrades, especially for the lower frequencies. Sensitivity studies show little effect on the predicted results for changes in impedance boundary condition values, source location, measurement location, temperature, and source model for variations spanning the expected measurement error.

Genetic variation in a DNA double strand break repair gene in saudi population: a comparative study with worldwide ethnic groups.

PubMed

Areeshi, Mohammed Yahya

2013-01-01

DNA repair capacity is crucial in maintaining cellular functions and homeostasis. However, it can be altered based on DNA sequence variations in DNA repair genes and this may lead to the development of many diseases including malignancies. Identification of genetic polymorphisms responsible for reduced DNA repair capacity is necessary for better prevention. Homologous recombination (HR), a major double strand break repair pathway, plays a critical role in maintaining the genome stability. The present study was performed to determine the frequency of the HR gene XRCC3 Exon 7 (C18067T, rs861539) polymorphisms in Saudi Arabian population in comparison with epidemiological studies by "MEDLINE" search to equate with global populations. The variant allelic (T) frequency of XRCC3 (C>T) was found to be 39%. Our results suggest that frequency of XRCC3 (C>T) DNA repair gene exhibits distinctive patterns compared with the Saudi Arabian population and this might be attributed to ethnic variation. The present findings may help in high-risk screening of humans exposed to environmental carcinogens and cancer predisposition in different ethnic groups.

Variation in plastic responses of a globally distributed picoplankton species to ocean acidification

NASA Astrophysics Data System (ADS)

Schaum, Elisa; Rost, Björn; Millar, Andrew J.; Collins, Sinéad

2013-03-01

Phytoplankton are the basis of marine food webs, and affect biogeochemical cycles. As CO2 levels increase, shifts in the frequencies and physiology of ecotypes within phytoplankton groups will affect their nutritional value and biogeochemical function. However, studies so far are based on a few representative genotypes from key species. Here, we measure changes in cellular function and growth rate at atmospheric CO2 concentrations predicted for the year 2100 in 16 ecotypes of the marine picoplankton Ostreococcus. We find that variation in plastic responses among ecotypes is on par with published between-genera variation, so the responses of one or a few ecotypes cannot estimate changes to the physiology or composition of a species under CO2 enrichment. We show that ecotypes best at taking advantage of CO2 enrichment by changing their photosynthesis rates most should increase in relative fitness, and so in frequency in a high-CO2 environment. Finally, information on sampling location, and not phylogenetic relatedness, is a good predictor of ecotypes likely to increase in frequency in this system.

[Cytogenetic, molecular cytogenetic, clinical and genealogical study of mothers of children with autism: a search for family genetic markers of autistic disorders].

PubMed

Vorsanova, S G; Voinova, V Iu; Iurov, I Iu; Kurinnaia, O S; Demidova, I A; Iurov, Iu B

2009-01-01

Using modern cytogenetic and molecular cytogenetic techniques towards the study of human chromosomes, an analysis of chromosomal abnormalities/chromosomal variations as well as clinical and genealogical data in mothers of children with autism has been performed. It has been shown that mothers of autistic children exhibit an increased incidence of chromosomal abnormalities (mainly mosaic forms involving chromosome X) and an increased occurrence of chromosomal variations compared to controls. The analysis of genotype-phenotype correlations revealed the increase in the frequency of cognitive disturbances and spontaneous abortions in mothers of children with autism as well as the higher frequency of mental retardation, early death and reproductive problems in the pedigrees. The high frequency of congenital malformations in the pedigrees of mothers with chromosomal variations was observed as well. Taking into account the data obtained, we have concluded that cytogenetic and molecular cytogenetic studies of mothers of children with autism are obligatory for detection of possible genetic causes of autism and genetic counseling of families with children affected with autistic disorders.

System for obtaining smooth laser beams where intensity variations are reduced by spectral dispersion of the laser light (SSD)

DOEpatents

Skupsky, S.; Kessler, T.J.; Short, R.W.; Craxton, S.; Letzring, S.A.; Soures, J.

1991-09-10

In an SSD (smoothing by spectral dispersion) system which reduces the time-averaged spatial variations in intensity of the laser light to provide uniform illumination of a laser fusion target, an electro-optic phase modulator through which a laser beam passes produces a broadband output beam by imposing a frequency modulated bandwidth on the laser beam. A grating provides spatial and angular spectral dispersion of the beam. Due to the phase modulation, the frequencies (''colors'') cycle across the beam. The dispersed beam may be amplified and frequency converted (e.g., tripled) in a plurality of beam lines. A distributed phase plate (DPP) in each line is irradiated by the spectrally dispersed beam and the beam is focused on the target where a smooth (uniform intensity) pattern is produced. The color cycling enhances smoothing and the use of a frequency modulated laser pulse prevents the formation of high intensity spikes which could damage the laser medium in the power amplifiers. 8 figures.

System for obtaining smooth laser beams where intensity variations are reduced by spectral dispersion of the laser light (SSD)

DOEpatents

Skupsky, Stanley; Kessler, Terrance J.; Short, Robert W.; Craxton, Stephen; Letzring, Samuel A.; Soures, John

1991-01-01

In an SSD (smoothing by spectral dispersion) system which reduces the time-averaged spatial variations in intensity of the laser light to provide uniform illumination of a laser fusion target, an electro-optic phase modulator through which a laser beam passes produces a broadband output beam by imposing a frequency modulated bandwidth on the laser beam. A grating provides spatial and angular spectral dispersion of the beam. Due to the phase modulation, the frequencies ("colors") cycle across the beam. The dispersed beam may be amplified and frequency converted (e.g., tripled) in a plurality of beam lines. A distributed phase plate (DPP) in each line is irradiated by the spectrally dispersed beam and the beam is focused on the target where a smooth (uniform intensity) pattern is produced. The color cycling enhances smoothing and the use of a frequency modulated laser pulse prevents the formation of high intensity spikes which could damage the laser medium in the power amplifiers.

Development of a new medium frequency EM device: Mapping soil water content variations using electrical conductivity and dielectric permittivity

NASA Astrophysics Data System (ADS)

Kessouri, P.; Buvat, S.; Tabbagh, A.

2012-12-01

Both electrical conductivity and dielectric permittivity of soil are influenced by its water content. Dielectric permittivity is usually measured in the high frequency range, using GPR or TDR, where the sensitivity to water content is high. However, its evaluation is limited by a low investigation depth, especially for clay rich soils. Electrical conductivity is closely related not only to soil water content, but also to clay content and soil structure. A simultaneous estimation of these electrical parameters can allow the mapping of soil water content variations for an investigation depth close to 1m. In order to estimate simultaneously both soil electrical conductivity and dielectric permittivity, an electromagnetic device working in the medium frequency range (between 100 kHz and 10 MHz) has been designed. We adopted Slingram geometry for the EM prototype: its PERP configuration (vertical transmission loop Tx and horizontal measuring loop Rx) was defined using 1D ground models. As the required investigation depth is around 1m, the coil spacing was fixed to 1.2m. This prototype works in a frequency range between 1 and 5 MHz. After calibration, we tested the response of prototype to objects with known properties. The first in situ measurements were led on experimental sites with different types of soils and different water content variations (artificially created or natural): sandy alluvium on a plot of INRA (French National Institute for Agricultural Research) in Orléans (Centre, France), a clay-loam soil on an experimental site in Estrée-Mons (Picardie, France) and fractured limestone at the vicinity of Grand (Vosges, France). In the case of the sandy alluvium, the values of dielectric permittivity measured are close to those of HF permittivity and allow the use of existing theoretical models to determine the soil water content. For soils containing higher amount of clay, the coupled information brought by the electrical conductivity and the dielectric permittivity is used. Variations of water content detected by the EM prototype are confirmed by additional DC electrical profiling and direct mass water content measurements along depth. For the clay-loam soil, containing more than 20% of clay, the relative dielectric permittivity values, ranging from 63 to 138, are much higher than those expected in the high frequency range (above 20 MHz, the highest measured permittivity is equal to 81 for water). In the medium frequency range, those values are very likely due to interfacial polarization. This effect, also known as Maxwell-Wagner polarization, should increase with the soil clay content. The first measuring trial is coherent with the gravimetric water content as well as DC electrical profiling measurements. For a clay rich soil, the EM prototype is able to detect water content variations for an investigation depth close to 1m with both electrical conductivity and dielectric permittivity in the medium frequency range. Other field experiments are scheduled to confirm these results on other types of soils.

PWM Switching Frequency Effects on Eddy Current Sensors for Magnetically Suspended Flywheel Systems

NASA Technical Reports Server (NTRS)

Jansen, Ralph; Lebron, Ramon; Dever, Timothy P.; Birchenough, Arthur G.

2003-01-01

A flywheel magnetic bearing (MB) pulse width modulated power amplifier (PWM) configuration is selected to minimize noise generated by the PWMs in the flywheel position sensor system. Two types of noise are addressed: beat frequency noise caused by variations in PWM switching frequencies, and demodulation noise caused by demodulation of high order harmonics of the switching voltage into the MB control band. Beat frequency noise is eliminated by synchronizing the PWM switch frequencies, and demodulation noise is minimized by selection of a switching frequency which does not have harmonics at the carrier frequency of the sensor. The recommended MB PWM system has five synchronized PWMs switching at a non-integer harmonic of the sensor carrier.

Study of guided modes in three-dimensional composites

NASA Astrophysics Data System (ADS)

Baste, S.; Gerard, A.

The propagation of elastic waves in a three-dimensional carbon-carbon composite is modeled with a mixed variational method, using the Bloch or Floquet theories and the Hellinger-Reissner function for two independent fields. The model of the equivalent homogeneous material only exists below a cut-off frequency of about 600 kHz. The existence below the cut-off frequency of two guided waves can account for the presence of a slow guided wave on either side of the cut-off frequency. Optical modes are generated at low frequencies, and can attain high velocites (rapid guided modes of 15,000 m/sec).

Coda Q and its Frequency Dependence in the Eastern Himalayan and Indo-Burman Plate Boundary Systems

NASA Astrophysics Data System (ADS)

Mitra, S.; Kumar, A.

2015-12-01

We use broadband waveform data for 305 local earthquakes from the Eastern Himalayan and Indo-Burman plate boundary systems, to model the seismic attenuation in NE India. We measure the decay in amplitude of coda waves at discreet frequencies (between 1 and 12Hz) to evaluate the quality factor (Qc) as a function of frequency. We combine these measurements to evaluate the frequency dependence of Qc of the form Qc(f)=Qof η, where Qo is the quality factor at 1Hz and η is the frequency dependence. Computed Qo values range from 80-360 and η ranges from 0.85-1.45. To study the lateral variation in Qo and η, we regionalise the Qc by combining all source-receiver measurements using a back-projection algorithm. For a single back scatter model, the coda waves sample an elliptical area with the epicenter and receiver at the two foci. We parameterize the region using square grids. The algorithm calculates the overlap in area and distributes Qc in the sampled grids using the average Qc as the boundary value. This is done in an iterative manner, by minimising the misfit between the observed and computed Qc within each grid. This process is repeated for all frequencies and η is computed for each grid by combining Qc for all frequencies. Our results reveal strong variation in Qo and η across NE India. The highest Qo are in the Bengal Basin (210-280) and the Indo-Burman subduction zone (300-360). The Shillong Plateau and Mikir Hills have intermediate Qo (~160) and the lowest Qo (~80) is observed in the Naga fold thrust belt. This variation in Qo demarcates the boundary between the continental crust beneath the Shillong Plateau and Mikir Hills and the transitional to oceanic crust beneath the Bengal Basin and Indo-Burman subduction zone. Thick pile of sedimentary strata in the Naga fold thrust belt results in the low Qo. Frequency dependence (η) of Qc across NE India is observed to be very high, with regions of high Qo being associated with relatively higher η.

Noise, air pollutants and traffic: continuous measurement and correlation at a high-traffic location in New York City.

PubMed

Ross, Zev; Kheirbek, Iyad; Clougherty, Jane E; Ito, Kazuhiko; Matte, Thomas; Markowitz, Steven; Eisl, Holger

2011-11-01

Epidemiological studies have linked both noise and air pollution to common adverse health outcomes such as increased blood pressure and myocardial infarction. In urban settings, noise and air pollution share important sources, notably traffic, and several recent studies have shown spatial correlations between noise and air pollution. The temporal association between these exposures, however, has yet to be thoroughly investigated despite the importance of time series studies in air pollution epidemiology and the potential that correlations between these exposures could at least partly confound statistical associations identified in these studies. An aethelometer, for continuous elemental carbon measurement, was co-located with a continuous noise monitor near a major urban highway in New York City for six days in August 2009. Hourly elemental carbon measurements and hourly data on overall noise levels and low, medium and high frequency noise levels were collected. Hourly average concentrations of fine particles and nitrogen oxides, wind speed and direction and car, truck and bus traffic were obtained from nearby regulatory monitors. Overall temporal patterns, as well as day-night and weekday-weekend patterns, were characterized and compared for all variables. Noise levels were correlated with car, truck, and bus traffic and with air pollutants. We observed strong day-night and weekday-weekend variation in noise and air pollutants and correlations between pollutants varied by noise frequency. Medium and high frequency noise were generally more strongly correlated with traffic and traffic-related pollutants than low frequency noise and the correlation with medium and high frequency noise was generally stronger at night. Correlations with nighttime high frequency noise were particularly high for car traffic (Spearman rho=0.84), nitric oxide (0.73) and nitrogen dioxide (0.83). Wind speed and direction mediated relationships between pollutants and noise. Noise levels are temporally correlated with traffic and combustion pollutants and correlations are modified by the time of day, noise frequency and wind. Our results underscore the potential importance of assessing temporal variation in co-exposures to noise and air pollution in studies of the health effects of these urban pollutants. Copyright © 2011 Elsevier Inc. All rights reserved.

High frequency thermal emission from the lunar surface and near surface temperature of the Moon from Chang’E-2 microwave radiometer

NASA Astrophysics Data System (ADS)

Fang, Tuo; Fa, Wenzhe

2014-04-01

Near surface temperature of the Moon and thermal behaviors of the lunar regolith can provide important information for constraining thermal and magmatic evolution models of the Moon and engineering constrains for in situ lunar exploration system. In this study, China’s Chang’E-2 (CE-2) microwave radiometer (MRM) data at high frequency channels are used to investigate near surface temperature of the Moon given the penetration ability of microwave into the desiccated and porous lunar regolith. Factors that affect high frequency brightness temperature (TB), such as surface slope, solar albedo and dielectric constant, are analyzed first using a revised Racca’s temperature model. Radiative transfer theory is then used to model thermal emission from a semi-infinite regolith medium, with considering dielectric constant and temperature profiles within the regolith layer. To decouple the effect of diurnal temperature variation in the uppermost lunar surface, diurnal averaged brightness temperatures at high frequency channels are used to invert mean diurnal surface and subsurface temperatures based on their bilinear profiles within the regolith layer. Our results show that, at the scale of the spatial resolution of CE-2 MRM, surface slope of crater wall varies typically from about 20° to 30°, and this causes a variation in TB about 10-15 K. Solar albedo can give rise to a TB difference of about 5-10 K between maria and highlands, whereas a ∼2-8 K difference can be compensated by the dielectric constant on the other hand. Inversion results indicate that latitude (ϕ) variations of the mean diurnal surface and subsurface temperatures follow simple rules as cos0.30ϕ and cos0.36ϕ, respectively. The inverted mean diurnal temperature profiles at the Apollo 15 and 17 landing sites are also compared with the Apollo heat flow experiment data, showing an inversion uncertainty <4 K for surface temperature and <1 K for subsurface temperature.

The Relationship of Temporal Variations in SMAP Vegetation Optical Depth to Plant Hydraulic Behavior

NASA Astrophysics Data System (ADS)

Konings, A. G.

2016-12-01

The soil emissions measured by L-band radiometers such as that on the NASA Soil Moisture Active/Passive mission are modulated by vegetation cover as quantified by the soil scattering albedo and the vegetation optical depth (VOD). The VOD is linearly proportional to the total vegetation water content, which is dependent on both the biomass and relative water content of the plant. Biomass is expected to vary more slowly than water content. Variations in vegetation water content are highly informative as they are directly indicative of the degree of hydraulic stress (or lack thereof) experienced by the plant. However, robust retrievals are needed in order for SMAP VOD observations to be useful. This is complicated by the fact that multiple unknowns (soil moisture, VOD, and albedo) need to be determined from two highly correlated polarizations. This presentation will discuss the application to SMAP of a recently developed timeseries algorithm for VOD and albedo retrieval - the Multi-Temporal Dual Channel Algorithm MTDCA, and its interpretation for plant hydraulic applications. The MT-DCA is based on the assumption that, for consecutive overpasses at a given time of day, VOD varies more slowly than soil moisture. A two-overpass moving average can then be used to determine variations in VOD that are less sensitive to high-frequency noise than classical dual-channel algorithms. Seasonal variations of SMAP VOD are presented and compared to expected patterns based on rainfall and radiation seasonality. Taking advantage of the large diurnal variation (relative to the seasonal variation) of canopy water potention, diurnal variations (between 6AM and 6PM observations) of SMAP VOD are then used to calculate global variations in ecosystem-scale isohydricity - the degree of stomatal closure and xylem conductivity loss in response to water stress. Lastly, the effect of satellite sensing frequency and overpass time on water content across canopies of different height will be discussed.

Evaluation of simulation motion fidelity criteria in the vertical and directional axes

NASA Technical Reports Server (NTRS)

Schroeder, Jeffery A.

1993-01-01

An evaluation of existing motion fidelity criteria was conducted on the NASA Ames Vertical Motion Simulator. Experienced test pilots flew single-axis repositioning tasks in both the vertical and the directional axes. Using a first-order approximation of a hovering helicopter, tasks were flown with variations only in the filters that attenuate the commands to the simulator motion system. These filters had second-order high-pass characteristics, and the variations were made in the filter gain and natural frequency. The variations spanned motion response characteristics from nearly full math-model motion to fixed-base. Between configurations, pilots recalibrated their motion response perception by flying the task with full motion. Pilots subjectively rated the motion fidelity of subsequent configurations relative to this full motion case, which was considered the standard for comparison. The results suggested that the existing vertical-axis criterion was accurate for combinations of gain and natural frequency changes. However, if only the gain or the natural frequency was changed, the rated motion fidelity was better than the criterion predicted. In the vertical axis, the objective and subjective results indicated that a larger gain reduction was tolerated than the existing criterion allowed. The limited data collected in the yaw axis revealed that pilots had difficulty in distinguishing among the variations in the pure yaw motion cues.

Electrically tunable transport and high-frequency dynamics in antiferromagnetic S r3I r2O7

NASA Astrophysics Data System (ADS)

Seinige, Heidi; Williamson, Morgan; Shen, Shida; Wang, Cheng; Cao, Gang; Zhou, Jianshi; Goodenough, John B.; Tsoi, Maxim

2016-12-01

We report dc and high-frequency transport properties of antiferromagnetic S r3I r2O7 . Temperature-dependent resistivity measurements show that the activation energy of this material can be tuned by an applied dc electrical bias. The latter allows for continuous variations in the sample resistivity of as much as 50% followed by a reversible resistive switching at higher biases. Such a switching is of high interest for antiferromagnetic applications in high-speed memory devices. Interestingly, we found the switching behavior to be strongly affected by a high-frequency (microwave) current applied to the sample. The microwaves at 3-7 GHz suppress the dc switching and produce resonancelike features that we tentatively associated with the dissipationless magnonics recently predicted to occur in antiferromagnetic insulators subject to ac electric fields. We have characterized the effects of microwave irradiation on electronic transport in S r3I r2O7 as a function of microwave frequency and power, strength and direction of external magnetic field, strength and polarity of applied dc bias, and temperature. Our observations support the potential of antiferromagnetic materials for high-speed/high-frequency spintronic applications.

Non-random occurrence of Robertsonian translocations in the house mouse (Mus musculus domesticus): is it related to quantitative variation in the minor satellite?

PubMed

Cazaux, Benoîte; Catalan, Josette; Claude, Julien; Britton-Davidian, Janice

2014-01-01

The house mouse, Mus musculus domesticus, shows extraordinary chromosomal diversity driven by fixation of Robertsonian (Rb) translocations. The high frequency of this rearrangement, which involves the centromeric regions, has been ascribed to the architecture of the satellite sequence (high quantity and homogeneity). This promotes centromere-related translocations through unequal recombination and gene conversion. A characteristic feature of Rb variation in this subspecies is the non-random contribution of different chromosomes to the translocation frequency, which, in turn, depends on the chromosome size. Here, the association between satellite quantity and Rb frequency was tested by PRINS of the minor satellite which is the sequence involved in the translocation breakpoints. Five chromosomes with different translocation frequencies were selected and analyzed among wild house mice from 8 European localities. Using a relative quantitative measurement per chromosome, the analysis detected a large variability in signal size most of which was observed between individuals and/or localities. The chromosomes differed significantly in the quantity of the minor satellite, but these differences were not correlated with their translocation frequency. However, the data uncovered a marginally significant correlation between the quantity of the minor satellite and chromosome size. The implications of these results on the evolution of the chromosomal architecture in the house mouse are discussed. © 2014 S. Karger AG, Basel.

Population-genetic nature of copy number variations in the human genome.

PubMed

Kato, Mamoru; Kawaguchi, Takahisa; Ishikawa, Shumpei; Umeda, Takayoshi; Nakamichi, Reiichiro; Shapero, Michael H; Jones, Keith W; Nakamura, Yusuke; Aburatani, Hiroyuki; Tsunoda, Tatsuhiko

2010-03-01

Copy number variations (CNVs) are universal genetic variations, and their association with disease has been increasingly recognized. We designed high-density microarrays for CNVs, and detected 3000-4000 CNVs (4-6% of the genomic sequence) per population that included CNVs previously missed because of smaller sizes and residing in segmental duplications. The patterns of CNVs across individuals were surprisingly simple at the kilo-base scale, suggesting the applicability of a simple genetic analysis for these genetic loci. We utilized the probabilistic theory to determine integer copy numbers of CNVs and employed a recently developed phasing tool to estimate the population frequencies of integer copy number alleles and CNV-SNP haplotypes. The results showed a tendency toward a lower frequency of CNV alleles and that most of our CNVs were explained only by zero-, one- and two-copy alleles. Using the estimated population frequencies, we found several CNV regions with exceptionally high population differentiation. Investigation of CNV-SNP linkage disequilibrium (LD) for 500-900 bi- and multi-allelic CNVs per population revealed that previous conflicting reports on bi-allelic LD were unexpectedly consistent and explained by an LD increase correlated with deletion-allele frequencies. Typically, the bi-allelic LD was lower than SNP-SNP LD, whereas the multi-allelic LD was somewhat stronger than the bi-allelic LD. After further investigation of tag SNPs for CNVs, we conclude that the customary tagging strategy for disease association studies can be applicable for common deletion CNVs, but direct interrogation is needed for other types of CNVs.

Variability of accretion disks surrounding black holes: The role of inertial-acoustic mode instabilities

NASA Technical Reports Server (NTRS)

Chen, Xingming; Taam, Ronald E.

1995-01-01

The global nonlinear time-dependent evolution of the inertial-acoustic mode instability in accretion disks surrounding black holes has been investigated. The viscous stress is assumed to be proportional to the gas pressure only, i.e., tau = alphap(sub g). It is found that an oscillatory nonsteady behavior exists in the inner regions of disks (r is less than 10r(sub g) where r(sub g) is the Schwarzschild radius) for sufficiently large alpha(greater than or approximately equal to 0.2) and for mass accretion rates less than about 0.3 times the Eddington value. The variations of the integrated bolometric luminosity from the disk, Delta L/L, are less than 3%. A power spectrum analysis of these variations reveals a power spectrum which can be fitted to a power-law function of the frequency Pis proportional to f(exp -gamma), with index gamma = 1.4-2.3 and a low-frequency feature at about 4 Hz in one case. In addition, a narrow peak centered at a frequency corresponding to the maximum epicyclic frequency of the disk at approximately 100-130 Hz and its first harmonic is also seen. The low-frequency modulations are remarkably similar to those observed in black hole candidate systems. The possible existence of a scattering corona in the inner region of the disk and/or other processes contributing to the power at high frequencies in the inner region of the accretion disk may make the detection of the high-frequency component difficult.

Applying the new method of time-frequency transforms to the analysis of the characteristics of geomagnetic Pc5 pulsations

NASA Astrophysics Data System (ADS)

Zelinsky, N. R.; Kleimenova, N. G.; Gromova, L. I.

2017-09-01

This study considers the possibility of using the new methods of time-frequency transforms, such as chirplet and warblet transforms, to analyze the digital observational data of geomagnetic pulsations of Pc5 type. For this purpose, necessary algorithms of calculation and appropriate software were developed. The chirplet transform method (CT) is used to analyze signals with a linear frequency modulation. A chirplet variation, the so-called warblet transform, is used to analyze signals with a nonlinear frequency modulation. Since, in studying geomagnetic pulsations, it is difficult to make assumptions on the character of the behavior of the instantaneous frequency of the signal, the special generalized warblet transform (GWT) was used for the analysis. The GWT has a high spatiotemporal resolution and was developed to analyze oscillations both with a periodic and nonperiodic change of the instantaneous frequency. The software developed for GWT calculation was used to study daytime geomagnetic Pc5 pulsations with durations of several hours that were detected via the network of ground-based magnetometers of the Scandinavian IMAGE profile during the magnetic storm of May 29-30, 2003. For the first time, temporal variations of the instantaneous frequency of geomagnetic pulsations are determined and their possible use in studying the fine spatial structure of Pc5 waves is shown.

Weighted combination of LOD values oa splitted into frequency windows

NASA Astrophysics Data System (ADS)

Fernandez, L. I.; Gambis, D.; Arias, E. F.

In this analysis a one-day combined time series of LOD(length-of-day) estimates is presented. We use individual data series derived by 7 GPS and 3 SLR analysis centers, which routinely contribute to the IERS database over a recent 27-month period (Jul 1996 - Oct 1998). The result is compared to the multi-technique combined series C04 produced by the Central Bureau of the IERS that is commonly used as a reference for the study of the phenomena of Earth rotation variations. The Frequency Windows Combined Series procedure brings out a time series, which is close to C04 but shows an amplitude difference that might explain the evident periodic behavior present in the differences of these two combined series. This method could be useful to generate a new time series to be used as a reference in the high frequency variations of the Earth rotation studies.

Entrainment effects in periodic forcing of the flow over a backward-facing step

NASA Astrophysics Data System (ADS)

Berk, T.; Medjnoun, T.; Ganapathisubramani, B.

2017-07-01

The effect of the Strouhal number on periodic forcing of the flow over a backward-facing step (height, H ) is investigated experimentally. Forcing is applied by a synthetic jet at the edge of the step at Strouhal numbers ranging from 0.21

A unified framework for physical print quality

NASA Astrophysics Data System (ADS)

Eid, Ahmed; Cooper, Brian; Rippetoe, Ed

2007-01-01

In this paper we present a unified framework for physical print quality. This framework includes a design for a testbed, testing methodologies and quality measures of physical print characteristics. An automatic belt-fed flatbed scanning system is calibrated to acquire L* data for a wide range of flat field imagery. Testing methodologies based on wavelet pre-processing and spectral/statistical analysis are designed. We apply the proposed framework to three common printing artifacts: banding, jitter, and streaking. Since these artifacts are directional, wavelet based approaches are used to extract one artifact at a time and filter out other artifacts. Banding is characterized as a medium-to-low frequency, vertical periodic variation down the page. The same definition is applied to the jitter artifact, except that the jitter signal is characterized as a high-frequency signal above the banding frequency range. However, streaking is characterized as a horizontal aperiodic variation in the high-to-medium frequency range. Wavelets at different levels are applied to the input images in different directions to extract each artifact within specified frequency bands. Following wavelet reconstruction, images are converted into 1-D signals describing the artifact under concern. Accurate spectral analysis using a DFT with Blackman-Harris windowing technique is used to extract the power (strength) of periodic signals (banding and jitter). Since streaking is an aperiodic signal, a statistical measure is used to quantify the streaking strength. Experiments on 100 print samples scanned at 600 dpi from 10 different printers show high correlation (75% to 88%) between the ranking of these samples by the proposed metrologies and experts' visual ranking.

The evolution of social learning rules: payoff-biased and frequency-dependent biased transmission.

PubMed

Kendal, Jeremy; Giraldeau, Luc-Alain; Laland, Kevin

2009-09-21

Humans and other animals do not use social learning indiscriminately, rather, natural selection has favoured the evolution of social learning rules that make selective use of social learning to acquire relevant information in a changing environment. We present a gene-culture coevolutionary analysis of a small selection of such rules (unbiased social learning, payoff-biased social learning and frequency-dependent biased social learning, including conformism and anti-conformism) in a population of asocial learners where the environment is subject to a constant probability of change to a novel state. We define conditions under which each rule evolves to a genetically polymorphic equilibrium. We find that payoff-biased social learning may evolve under high levels of environmental variation if the fitness benefit associated with the acquired behaviour is either high or low but not of intermediate value. In contrast, both conformist and anti-conformist biases can become fixed when environment variation is low, whereupon the mean fitness in the population is higher than for a population of asocial learners. Our examination of the population dynamics reveals stable limit cycles under conformist and anti-conformist biases and some highly complex dynamics including chaos. Anti-conformists can out-compete conformists when conditions favour a low equilibrium frequency of the learned behaviour. We conclude that evolution, punctuated by the repeated successful invasion of different social learning rules, should continuously favour a reduction in the equilibrium frequency of asocial learning, and propose that, among competing social learning rules, the dominant rule will be the one that can persist with the lowest frequency of asocial learning.

Diurnal Variation of Tropical Ice Cloud Microphysics inferred from Global Precipitation Measurement Microwave Imager (GPM-GMI)'s Polarimetric Measurement

NASA Astrophysics Data System (ADS)

Gong, J.; Zeng, X.; Wu, D. L.; Li, X.

2017-12-01

Diurnal variation of tropical ice cloud has been well observed and examined in terms of the area of coverage, occurring frequency, and total mass, but rarely on ice microphysical parameters (habit, size, orientation, etc.) because of lack of direct measurements of ice microphysics on a high temporal and spatial resolutions. This accounts for a great portion of the uncertainty in evaluating ice cloud's role on global radiation and hydrological budgets. The design of Global Precipitation Measurement (GPM) mission's procession orbit gives us an unprecedented opportunity to study the diurnal variation of ice microphysics on the global scale for the first time. Dominated by cloud ice scattering, high-frequency microwave polarimetric difference (PD, namely the brightness temperature difference between vertically- and horizontally-polarized paired channel measurements) from the GPM Microwave Imager (GMI) has been proven by our previous study to be very valuable to infer cloud ice microphysical properties. Using one year of PD measurements at 166 GHz, we found that cloud PD exhibits a strong diurnal cycle in the tropics (25S-25N). The peak PD amplitude varies as much as 35% over land, compared to only 6% over ocean. The diurnal cycle of the peak PD value is strongly anti-correlated with local ice cloud occurring frequency and the total ice mass with a leading period of 3 hours for the maximum correlation. The observed PD diurnal cycle can be explained by the change of ice crystal axial ratio. Using a radiative transfer model, we can simulate the observed 166 GHz PD-brightness temperature curve as well as its diurnal variation using different axial ratio values, which can be caused by the diurnal variation of ice microphysical properties including particle size, percentage of horizontally-aligned non-spherical particles, and ice habit. The leading of the change of PD ahead of ice cloud mass and occurring frequency implies the important role microphysics play in the formation and dissipation processes of ice clouds and frozen precipitations.

Signal Analysis Algorithms for Optimized Fitting of Nonresonant Laser Induced Thermal Acoustics Damped Sinusoids

NASA Technical Reports Server (NTRS)

Balla, R. Jeffrey; Miller, Corey A.

2008-01-01

This study seeks a numerical algorithm which optimizes frequency precision for the damped sinusoids generated by the nonresonant LITA technique. It compares computed frequencies, frequency errors, and fit errors obtained using five primary signal analysis methods. Using variations on different algorithms within each primary method, results from 73 fits are presented. Best results are obtained using an AutoRegressive method. Compared to previous results using Prony s method, single shot waveform frequencies are reduced approx.0.4% and frequency errors are reduced by a factor of approx.20 at 303K to approx. 0.1%. We explore the advantages of high waveform sample rates and potential for measurements in low density gases.

Novel high-gain, improved-bandwidth, finned-ladder V-band Traveling-Wave Tube slow-wave circuit design

NASA Technical Reports Server (NTRS)

Kory, Carol L.; Wilson, Jeffrey D.

1994-01-01

The V-band frequency range of 59-64 GHz is a region of the millimeter-wave spectrum that has been designated for inter-satellite communications. As a first effort to develop a high-efficiency V-band Traveling-Wave Tube (TWT), variations on a ring-plane slow-wave circuit were computationally investigated to develop an alternative to the more conventional ferruled coupled-cavity circuit. The ring-plane circuit was chosen because of its high interaction impedance, large beam aperture, and excellent thermal dissipation properties. Despite these advantages, however, low bandwidth and high voltage requirements have, until now, prevented its acceptance outside the laboratory. In this paper, the three-dimensional electrodynamic simulation code MAFIA (solution of MAxwell's Equation by the Finite-Integration-Algorithm) is used to investigate methods of increasing the bandwidth and lowering the operating voltage of the ring-plane circuit. Calculations of frequency-phase dispersion, beam on-axis interaction impedance, attenuation and small-signal gain per wavelength were performed for various geometric variations and loading distributions of the ring-plane TWT slow-wave circuit. Based on the results of the variations, a circuit termed the finned-ladder TWT slow-wave circuit was designed and is compared here to the scaled prototype ring-plane and a conventional ferruled coupled-cavity TWT circuit over the V-band frequency range. The simulation results indicate that this circuit has a much higher gain, significantly wider bandwidth, and a much lower voltage requirement than the scaled ring-plane prototype circuit, while retaining its excellent thermal dissipation properties. The finned-ladder circuit has a much larger small-signal gain per wavelength than the ferruled coupled-cavity circuit, but with a moderate sacrifice in bandwidth.

Self-Motion and the Shaping of Sensory Signals

PubMed Central

Jenks, Robert A.; Vaziri, Ashkan; Boloori, Ali-Reza

2010-01-01

Sensory systems must form stable representations of the external environment in the presence of self-induced variations in sensory signals. It is also possible that the variations themselves may provide useful information about self-motion relative to the external environment. Rats have been shown to be capable of fine texture discrimination and object localization based on palpation by facial vibrissae, or whiskers, alone. During behavior, the facial vibrissae brush against objects and undergo deflection patterns that are influenced both by the surface features of the objects and by the animal's own motion. The extent to which behavioral variability shapes the sensory inputs to this pathway is unknown. Using high-resolution, high-speed videography of unconstrained rats running on a linear track, we measured several behavioral variables including running speed, distance to the track wall, and head angle, as well as the proximal vibrissa deflections while the distal portions of the vibrissae were in contact with periodic gratings. The measured deflections, which serve as the sensory input to this pathway, were strongly modulated both by the properties of the gratings and the trial-to-trial variations in head-motion and locomotion. Using presumed internal knowledge of locomotion and head-rotation, gratings were classified using short-duration trials (<150 ms) from high-frequency vibrissa motion, and the continuous trajectory of the animal's own motion through the track was decoded from the low frequency content. Together, these results suggest that rats have simultaneous access to low- and high-frequency information about their environment, which has been shown to be parsed into different processing streams that are likely important for accurate object localization and texture coding. PMID:20164407

Variations of High-Latitude Geomagnetic Pulsation Frequencies: A Comparison of Time-of-Flight Estimates and IMAGE Magnetometer Observations

NASA Astrophysics Data System (ADS)

Sandhu, J. K.; Yeoman, T. K.; James, M. K.; Rae, I. J.; Fear, R. C.

2018-01-01

The fundamental eigenfrequencies of standing Alfvén waves on closed geomagnetic field lines are estimated for the region spanning 5.9≤L < 9.5 over all MLT (Magnetic Local Time). The T96 magnetic field model and a realistic empirical plasma mass density model are employed using the time-of-flight approximation, refining previous calculations that assumed a relatively simplistic mass density model. An assessment of the implications of using different mass density models in the time-of-flight calculations is presented. The calculated frequencies exhibit dependences on field line footprint magnetic latitude and MLT, which are attributed to both magnetic field configuration and spatial variations in mass density. In order to assess the validity of the time-of-flight calculated frequencies, the estimates are compared to observations of FLR (Field Line Resonance) frequencies. Using IMAGE (International Monitor for Auroral Geomagnetic Effects) ground magnetometer observations obtained between 2001 and 2012, an automated FLR identification method is developed, based on the cross-phase technique. The average FLR frequency is determined, including variations with footprint latitude and MLT, and compared to the time-of-flight analysis. The results show agreement in the latitudinal and local time dependences. Furthermore, with the use of the realistic mass density model in the time-of-flight calculations, closer agreement with the observed FLR frequencies is obtained. The study is limited by the latitudinal coverage of the IMAGE magnetometer array, and future work will aim to extend the ground magnetometer data used to include additional magnetometer arrays.

Lateral variation of seismic attenuation in Sikkim Himalaya

NASA Astrophysics Data System (ADS)

Thirunavukarasu, Ajaay; Kumar, Ajay; Mitra, Supriyo

2017-01-01

We use data from local earthquakes (mb ≥ 3.0) recorded by the Sikkim broad-band seismograph network to study the frequency-dependent attenuation of the crust and uppermost mantle. These events have been relocated using body wave phase data from local and regional seismograms. The decay of coda amplitudes at a range of central frequencies (1 to 12 Hz) has been measured for 74 earthquake-receiver pairs. These measurements are combined to estimate the frequency-dependent coda Q of the form Q( f) = Q0 f η. The estimated Q0 values range from 80 to 200, with an average of 123 ± 29; and η ranges from 0.92 to 1.04, with an average of 0.98 ± 0.04. To study the lateral variation of Q0 and η, we regionalized the measured Q values by combining all the earthquake-receiver path measurements through a back projection algorithm. We consider a single back-scatter model for the coda waves with elliptical sampling and parametrize the sampled area using 0.2° square grids. A nine-point spatial smoothening (similar to spatial Gaussian filter) is applied to stabilize the inversion. This is done at every frequency to observe the spatial variation of Q( f) and subsequently combined to obtain η variations. Results of our study reveal that the Sikkim Himalaya is characterized by low Q0 (80-100) compared to the foreland basin to its south (150-200) and the Nepal Himalaya to its west (140-160). The low Q and high η in Sikkim Himalaya is attributed to extrinsic scattering attenuation from structural heterogeneity and active faults within the crust, and intrinsic attenuation due to anelasticity in the hotter lithosphere beneath the actively deforming mountain belt. Similar low Q and high η values had also been observed in northwest and Garhwal-Kumaun Himalaya.

Partial differential equation transform — Variational formulation and Fourier analysis

PubMed Central

Wang, Yang; Wei, Guo-Wei; Yang, Siyang

2011-01-01

Nonlinear partial differential equation (PDE) models are established approaches for image/signal processing, data analysis and surface construction. Most previous geometric PDEs are utilized as low-pass filters which give rise to image trend information. In an earlier work, we introduced mode decomposition evolution equations (MoDEEs), which behave like high-pass filters and are able to systematically provide intrinsic mode functions (IMFs) of signals and images. Due to their tunable time-frequency localization and perfect reconstruction, the operation of MoDEEs is called a PDE transform. By appropriate selection of PDE transform parameters, we can tune IMFs into trends, edges, textures, noise etc., which can be further utilized in the secondary processing for various purposes. This work introduces the variational formulation, performs the Fourier analysis, and conducts biomedical and biological applications of the proposed PDE transform. The variational formulation offers an algorithm to incorporate two image functions and two sets of low-pass PDE operators in the total energy functional. Two low-pass PDE operators have different signs, leading to energy disparity, while a coupling term, acting as a relative fidelity of two image functions, is introduced to reduce the disparity of two energy components. We construct variational PDE transforms by using Euler-Lagrange equation and artificial time propagation. Fourier analysis of a simplified PDE transform is presented to shed light on the filter properties of high order PDE transforms. Such an analysis also offers insight on the parameter selection of the PDE transform. The proposed PDE transform algorithm is validated by numerous benchmark tests. In one selected challenging example, we illustrate the ability of PDE transform to separate two adjacent frequencies of sin(x) and sin(1.1x). Such an ability is due to PDE transform’s controllable frequency localization obtained by adjusting the order of PDEs. The frequency selection is achieved either by diffusion coefficients or by propagation time. Finally, we explore a large number of practical applications to further demonstrate the utility of proposed PDE transform. PMID:22207904

Interannual (1999-2005) morphodynamic evolution of macro-tidal salt marshes in Mont-Saint-Michel Bay (France)

NASA Astrophysics Data System (ADS)

Détriché, Sébastien; Susperregui, Anne-Sophie; Feunteun, Eric; Lefeuvre, Jean-Claude; Jigorel, Alain

2011-04-01

This paper provides a detailed study on the sedimentation patterns and the recent morphodynamic evolution affecting the macro-tidal salt marshes located west of the Mont-Saint-Michel (France). Twenty-two stations along three transects on the marshes were seasonally monitored for marsh surface level variations from 1999 to 2005, using a sediment erosion bar. The corresponding erosion/accretion rates were obtained together with data on topography, vegetation cover, and grain size of surface sediment. To examine the mechanisms contributing to the salt marsh sedimentation, the data and their evolution were treated with respect to tides, relative mean regional sea level, and wind speed/frequency variations. From 1999 to 2005, the marsh was globally accreting (from 3.45 to 38.11 mm yr -1 in the low marsh, up to 4.91 mm yr -1 in the middle marsh, and up to 1.35 mm yr -1 in the high marsh), while the study was conducted during a window of decreasing trend in mean regional sea level (-2.45 mm yr -1 according to regional-averaged time series). These sedimentation rates are one of the highest recorded worldwide; however, the sedimentation was not found to be continuous over the period in question. This pattern is illustrated by the strong extension of the marshes from 1999 to 2002, and the relative stability observed from 2003 to 2005. The imported and reworked sediments are trapped and fixed by the dense vegetation ( Puccinellia maritima, Halimione portulacoides), inducing the general seaward extension of the marshes. The processes governing sediment budget (accretion/erosion) show annual, seasonal, and spatial variability on the marsh. Spatial variations display contrasted patterns of erosion/sedimentation between the low, middle, and high marsh, and between the different transects. These patterns are a result of distance from sediment sources, strong heterogeneity in vegetation cover (human induced or not), and contrasting topographic and micro-topographic characteristics. The higher accretion rates are observed in distal settings in the low marsh, and strongly decrease toward the middle and high marsh. This evolution results from a decrease in accommodation space/water column thickness, and frequency of inundation coupled with an increase in station elevation, but also from the cumulated effects of vegetation cover and micro-topography. The vegetation cover of the low and middle marsh enhance the settling and fixing of fine sediments imported through tides or dispersed by flood and ebb currents. The seasonal evolution of the marshes is marked by contrasting effects of water storage in the sediment. The overall seasonal sediment budget is controlled by the variation of the frequency of inundation relative to tidal range and marshes topography. Autumns are influenced by the tide (equinoxes), relative mean regional sea level, and variations in wind speed/frequency. Winter wind speed and frequency in relation with tidal variations appear to be the main parameters regulating winter marsh evolution. Summers are predominantly under the influence of local variations in water storage (desiccation) while external parameters generally display a low influence. Although it is not governed by any one parameter, springtime sediment budget seems to result from strong interaction between the above-cited parameters, despite the significant frequency of inundation (equinoxes).

Time-Varying Vocal Folds Vibration Detection Using a 24 GHz Portable Auditory Radar

PubMed Central

Hong, Hong; Zhao, Heng; Peng, Zhengyu; Li, Hui; Gu, Chen; Li, Changzhi; Zhu, Xiaohua

2016-01-01

Time-varying vocal folds vibration information is of crucial importance in speech processing, and the traditional devices to acquire speech signals are easily smeared by the high background noise and voice interference. In this paper, we present a non-acoustic way to capture the human vocal folds vibration using a 24-GHz portable auditory radar. Since the vocal folds vibration only reaches several millimeters, the high operating frequency and the 4 × 4 array antennas are applied to achieve the high sensitivity. The Variational Mode Decomposition (VMD) based algorithm is proposed to decompose the radar-detected auditory signal into a sequence of intrinsic modes firstly, and then, extract the time-varying vocal folds vibration frequency from the corresponding mode. Feasibility demonstration, evaluation, and comparison are conducted with tonal and non-tonal languages, and the low relative errors show a high consistency between the radar-detected auditory time-varying vocal folds vibration and acoustic fundamental frequency, except that the auditory radar significantly improves the frequency-resolving power. PMID:27483261

Time-Varying Vocal Folds Vibration Detection Using a 24 GHz Portable Auditory Radar.

PubMed

Hong, Hong; Zhao, Heng; Peng, Zhengyu; Li, Hui; Gu, Chen; Li, Changzhi; Zhu, Xiaohua

2016-07-28

Time-varying vocal folds vibration information is of crucial importance in speech processing, and the traditional devices to acquire speech signals are easily smeared by the high background noise and voice interference. In this paper, we present a non-acoustic way to capture the human vocal folds vibration using a 24-GHz portable auditory radar. Since the vocal folds vibration only reaches several millimeters, the high operating frequency and the 4 × 4 array antennas are applied to achieve the high sensitivity. The Variational Mode Decomposition (VMD) based algorithm is proposed to decompose the radar-detected auditory signal into a sequence of intrinsic modes firstly, and then, extract the time-varying vocal folds vibration frequency from the corresponding mode. Feasibility demonstration, evaluation, and comparison are conducted with tonal and non-tonal languages, and the low relative errors show a high consistency between the radar-detected auditory time-varying vocal folds vibration and acoustic fundamental frequency, except that the auditory radar significantly improves the frequency-resolving power.

Determinants of echolocation call frequency variation in the Formosan lesser horseshoe bat (Rhinolophus monoceros)

PubMed Central

Chen, Shiang-Fan; Jones, Gareth; Rossiter, Stephen J.

2009-01-01

The origin and maintenance of intraspecific variation in vocal signals is important for population divergence and speciation. Where vocalizations are transmitted by vertical cultural inheritance, similarity will reflect co-ancestry, and thus vocal divergence should reflect genetic structure. Horseshoe bats are characterized by echolocation calls dominated by a constant frequency component that is partly determined by maternal imprinting. Although previous studies showed that constant frequency calls are also influenced by some non-genetic factors, it is not known how frequency relates to genetic structure. To test this, we related constant frequency variation to genetic and non-genetic variables in the Formosan lesser horseshoe bat (Rhinolophus monoceros). Recordings of bats from across Taiwan revealed that females called at higher frequencies than males; however, we found no effect of environmental or morphological factors on call frequency. By comparison, variation showed clear population structure, with frequencies lower in the centre and east, and higher in the north and south. Within these regions, frequency divergence was directional and correlated with geographical distance, suggesting that call frequencies are subject to cultural drift. However, microsatellite clustering analysis showed that broad differences in constant frequency among populations corresponded to discontinuities in allele frequencies resulting from vicariant events. Our results provide evidence that the processes shaping genetic subdivision have concomitant consequences for divergence in echolocation call frequency. PMID:19692399

Variational theory of the tapered impedance transformer

NASA Astrophysics Data System (ADS)

Erickson, Robert P.

2018-02-01

Superconducting amplifiers are key components of modern quantum information circuits. To minimize information loss and reduce oscillations, a tapered impedance transformer of new design is needed at the input/output for compliance with other 50 Ω components. We show that an optimal tapered transformer of length ℓ, joining the amplifier to the input line, can be constructed using a variational principle applied to the linearized Riccati equation describing the voltage reflection coefficient of the taper. For an incident signal of frequency ωo, the variational solution results in an infinite set of equivalent optimal transformers, each with the same form for the reflection coefficient, each able to eliminate input-line reflections. For the special case of optimal lossless transformers, the group velocity vg is shown to be constant, with characteristic impedance dependent on frequency ωc = πvg/ℓ. While these solutions inhibit input-line reflections only for frequency ωo, a subset of optimal lossless transformers with ωo significantly detuned from ωc does exhibit a wide bandpass. Specifically, by choosing ωo → 0 (ωo → ∞), we obtain a subset of optimal low-pass (high-pass) lossless tapers with bandwidth (0, ˜ ωc) [(˜ωc, ∞)]. From the subset of solutions, we derive both the wide-band low-pass and high-pass transformers, and we discuss the extent to which they can be realized given fabrication constraints. In particular, we demonstrate the superior reflection response of our high-pass transformer when compared to other taper designs. Our results have application to amplifiers, transceivers, and other components sensitive to impedance mismatch.

Global warming and tropical cyclone climate in the western North Pacific

NASA Astrophysics Data System (ADS)

Kang, Nam-Young

Violent tropical cyclones (TCs) continue to inflict serious impacts on national economies and welfare, but how they are responding to global warming has not been fully clarified. Here I construct an empirical framework that shows the observations supporting a strong link between rising global ocean warmth and increasing trade-off between TC intensity and frequency in the western North Pacific. Thermodynamic structure of the tropical western North Pacific with high global ocean warmth is characterized by convectively more unstable lower troposphere with greater heat and moisture, but this instability is simultaneously accompanied by anomalous high pressure in the middle and upper troposphere over the same region. Increasing trade-off level between TC intensity and frequency in a warmer year proves that this environment further inhibits the TC occurrences over the region, but TCs that form tend to discharge stored energy to upper troposphere with stronger intensities. By increasing the intensity threshold at higher levels we confirmed that the TC climate connection with global ocean warmth occurs throughout the strongest portion of TCs, and the environmental connection of the TC climate is more conspicuous in the extreme portion of TCs. Intensities at the strongest 10~% of the western North Pacific TCs are comparable to super typhoons on average, the increasing trade-off magnitude clearly suggests that super typhoons in a warmer year gets stronger. Conclusively, the negative collinear feature of the thermodynamics influences the portion of TCs at the highest intensities, and super typhoons are likely to become stronger at the expense of overall TC frequencies in a warmer world. The consequence of this finding is that record-breaking TC intensities occur at the expense of overall TC frequencies under global warming. TC activity is understood as a variation which is independent of global warming, and could be assumed to be an internal variability having no trend. Frequency variation and super typhoon intensity variation are regarded as the addition of global warming influence on TC activity variation. The structure depicts how a previous intensity record is overtaken and frequency falls continuously in the global warming environment in a linear perspective. A peak TC activity year when global ocean warmth is the highest ever is likely to experience a record-breaking intensity. In the same way, the least number of annual TCs may appear when a lull of TC activity occurs in the warmest year.

Exploration of a Permanent Magnet Synchronous Generator with Compensated Reactance Windings in Parallel Rod Configuration

NASA Astrophysics Data System (ADS)

Lyan, Oleg; Jankunas, Valdas; Guseinoviene, Eleonora; Pašilis, Aleksas; Senulis, Audrius; Knolis, Audrius; Kurt, Erol

2018-02-01

In this study, a permanent magnet synchronous generator (PMSG) topology with compensated reactance windings in parallel rod configuration is proposed to reduce the armature reactance X L and to achieve higher efficiency of PMSG. The PMSG was designed using iron-cored bifilar coil topology to overcome problems of market-dominant rotary type generators. Often the problem is a comparatively high armature reactance X L, which is usually bigger than armature resistance R a. Therefore, the topology is proposed to partially compensate or negligibly reduce the PMSG reactance. The study was performed by using finite element method (FEM) analysis and experimental investigation. FEM analysis was used to investigate magnetic field flux distribution and density in PMSG. The PMSG experimental analyses of no-load losses and electromotive force versus frequency (i.e., speed) was performed. Also terminal voltage, power output and efficiency relation with load current at different frequencies have been evaluated. The reactance of PMSG has low value and a linear relation with operating frequency. The low reactance gives a small variation of efficiency (from 90% to 95%) in a wide range of load (from 3 A to 10 A) and operation frequency (from 44 Hz to 114 Hz). The comparison of PMSG characteristics with parallel and series winding connection showed insignificant power variation. The research results showed that compensated reactance winding in parallel rod configuration in PMSG design provides lower reactance and therefore, higher efficiency under wider load and frequency variation.

Series resonant converter with auxiliary winding turns: analysis, design and implementation

NASA Astrophysics Data System (ADS)

Lin, Bor-Ren

2018-05-01

Conventional series resonant converters have researched and applied for high-efficiency power units due to the benefit of its low switching losses. The main problems of series resonant converters are wide frequency variation and high circulating current. Thus, resonant converter is limited at narrow input voltage range and large input capacitor is normally adopted in commercial power units to provide the minimum hold-up time requirement when AC power is off. To overcome these problems, the resonant converter with auxiliary secondary windings are presented in this paper to achieve high voltage gain at low input voltage case such as hold-up time duration when utility power is off. Since the high voltage gain is used at low input voltage cased, the frequency variation of the proposed converter compared to the conventional resonant converter is reduced. Compared to conventional resonant converter, the hold-up time in the proposed converter is more than 40ms. The larger magnetising inductance of transformer is used to reduce the circulating current losses. Finally, a laboratory prototype is constructed and experiments are provided to verify the converter performance.

Sub-micron materials characterization using near-field optics

NASA Astrophysics Data System (ADS)

Blodgett, David Wesley

1998-12-01

High-resolution sub-surface materials characterization and inspection are critical in the microelectronics and thin films industries. To this end, a technique is described that couples the bulk property measurement capabilities of high-frequency ultrasound with the high-resolution surface imaging capabilities of the near-field optical microscope. Sensing bulk microstructure variations in the material, such as grain boundaries, requires a detection footprint smaller than the variation itself. The near-field optical microscope, with the ability to exceed the diffraction limit in optical resolution, meets this requirement. Two apertureless near-field optical microscopes, on-axis and off-axis illumination, have been designed and built. Near-field and far-field approach curves for both microscopes are presented. The sensitivity of the near-field approach curve was 8.3 muV/nm. Resolution studies for the near-field microscope indicate optical resolutions on the order of 50 nm, which exceeds the diffraction limit. The near-field microscope has been adapted to detect both contact-transducer-generated and laser-generated ultrasound. The successful detection of high-frequency ultrasound with the near-field optical microscope demonstrates the potential of this technique.

Rapid response of tidal channel networks to sea-level variations (Venice Lagoon, Italy)

NASA Astrophysics Data System (ADS)

Rizzetto, Federica; Tosi, Luigi

2012-07-01

The aim of the present paper is to examine the effects of long- and short-term sea-level fluctuations (i.e. relative sea-level rise and tides) on the geomorphologic evolution of modern tidal channels through the joint interpretation of channel modifications, the 1938-2010 yearly time series of relative sea-level rise, and the variations of strength and frequency of high tides which occurred in the same period. We analyzed a salt marsh area not particularly modified by human interventions, located in the northern Venice Lagoon, Italy. The availability of a long historical record of high-resolution aerial photographs provided us the opportunity to reconstruct in detail the evolution of the drainage patterns from 1938 to the present. Results from our analyses gave us information about the degree of control of long- and short-term sea-level fluctuations on planimetric development of tidal channels and provided demonstration of the rapid response of the drainage network to these oscillations. We found that both relative sea-level rise and high tide frequency greatly influenced salt marsh margin shift and meander evolution of tidal channels in the long term, but short-term sinuosity changes of creeks were often also closely related to tide variations. Channels nearer the marsh margin were more exposed to the action of the increasing tides.

Genome-wide association studies reveal a simple genetic basis of resistance to naturally coevolving viruses in Drosophila melanogaster.

PubMed

Magwire, Michael M; Fabian, Daniel K; Schweyen, Hannah; Cao, Chuan; Longdon, Ben; Bayer, Florian; Jiggins, Francis M

2012-01-01

Variation in susceptibility to infectious disease often has a substantial genetic component in animal and plant populations. We have used genome-wide association studies (GWAS) in Drosophila melanogaster to identify the genetic basis of variation in susceptibility to viral infection. We found that there is substantially more genetic variation in susceptibility to two viruses that naturally infect D. melanogaster (DCV and DMelSV) than to two viruses isolated from other insects (FHV and DAffSV). Furthermore, this increased variation is caused by a small number of common polymorphisms that have a major effect on resistance and can individually explain up to 47% of the heritability in disease susceptibility. For two of these polymorphisms, it has previously been shown that they have been driven to a high frequency by natural selection. An advantage of GWAS in Drosophila is that the results can be confirmed experimentally. We verified that a gene called pastrel--which was previously not known to have an antiviral function--is associated with DCV-resistance by knocking down its expression by RNAi. Our data suggest that selection for resistance to infectious disease can increase genetic variation by increasing the frequency of major-effect alleles, and this has resulted in a simple genetic basis to variation in virus resistance.

Immunoglobulin (Gm and Km) allotypes in nine endogamous groups of West Bengal, India.

PubMed

Chakraborty, R; Walter, H; Sauber, P; Mukherjee, B N; Malhotra, K C; Banerjee, S; Roy, M

1987-01-01

Blood samples from 898 individuals of nine endogamous groups of West Bengal, India were typed for determining the haplotypic structure in the gamma-light chain (Gm) and kappa-light chain (Km) of immunoglobulin (IgG). The Gm haplotype frequencies detected by Glm (1), Glm (2) and G3m (5) markers suggest that in this eastern state of India there is considerable variation of frequencies of the typical Mongoloid haplotype Gm1,5, which shows a high incidence in Rajbanshi, Rabha, Garo and Lodha groups. On the contrary, this haplotype is probably absent in the high caste groups, Rarhi Brahmin and Vaidya, and is relatively infrequent in Jalia Kaibarta, a scheduled caste of the south-western part of the state. The Km1 allele is also high in frequency among Rajbanshi, Rabha, Garo and Munda in comparison with Rarhi Brahmin and Vaidya, suggesting the former four groups' strong Mongoloid affiliation. This survey signifies that there is considerable variation in the extent of Mongoloid admixture in Bengali populations. Such admixture is not restricted in specific social class either. It further demonstrates that heterogeneity of the genetic structure of Bengali populations do not correspond to the present social ranking on the basis of caste hierarchy.

Spontaneous fluctuations in cerebral blood flow: insights from extended-duration recordings in humans

NASA Technical Reports Server (NTRS)

Zhang, R.; Zuckerman, J. H.; Levine, B. D.; Blomqvist, C. G. (Principal Investigator)

2000-01-01

To determine the dependence of cerebral blood flow (CBF) on arterial pressure over prolonged time periods, we measured beat-to-beat changes in mean CBF velocity in the middle cerebral artery (transcranial Doppler) and mean arterial pressure (Finapres) continuously for 2 h in six healthy subjects (5 men and 1 woman, 18-40 yr old) during supine rest. Fluctuations in velocity and pressure were quantified by the range [(peak - trough)/mean] and coefficients of variation (SD/mean) in the time domain and by spectral analysis in the frequency domain. Mean velocity and pressure over the 2-h recordings were 60 +/- 7 cm/s and 83 +/- 8 mmHg, associated with ranges of 77 +/- 8 and 89 +/- 10% and coefficients of variation of 9.3 +/- 2.2 and 7.9 +/- 2.3%, respectively. Spectral power of the velocity and pressure was predominantly distributed in the frequency range of 0.00014-0.1 Hz and increased inversely with frequency, indicating characteristics of an inverse power law (1/f(alpha)). However, linear regression on a log-log scale revealed that the slope of spectral power of pressure and velocity was steeper in the high-frequency (0.02-0.5 Hz) than in the low-frequency range (0.002-0.02 Hz), suggesting different regulatory mechanisms in these two frequency ranges. Furthermore, the spectral slope of pressure was significantly steeper than that of velocity in the low-frequency range, consistent with the low transfer function gain and low coherence estimated at these frequencies. We conclude that 1) long-term fluctuations in CBF velocity are prominent and similar to those observed in arterial pressure, 2) spectral power of CBF velocity reveals characteristics of 1/f(alpha), and 3) cerebral attenuation of oscillations in CBF velocity in response to changes in pressure may be more effective at low than that at high frequencies, emphasizing the frequency dependence of cerebral autoregulation.

Highly sensitive index of sympathetic activity based on time-frequency spectral analysis of electrodermal activity.

PubMed

Posada-Quintero, Hugo F; Florian, John P; Orjuela-Cañón, Álvaro D; Chon, Ki H

2016-09-01

Time-domain indices of electrodermal activity (EDA) have been used as a marker of sympathetic tone. However, they often show high variation between subjects and low consistency, which has precluded their general use as a marker of sympathetic tone. To examine whether power spectral density analysis of EDA can provide more consistent results, we recently performed a variety of sympathetic tone-evoking experiments (43). We found significant increase in the spectral power in the frequency range of 0.045 to 0.25 Hz when sympathetic tone-evoking stimuli were induced. The sympathetic tone assessed by the power spectral density of EDA was found to have lower variation and more sensitivity for certain, but not all, stimuli compared with the time-domain analysis of EDA. We surmise that this lack of sensitivity in certain sympathetic tone-inducing conditions with time-invariant spectral analysis of EDA may lie in its inability to characterize time-varying dynamics of the sympathetic tone. To overcome the disadvantages of time-domain and time-invariant power spectral indices of EDA, we developed a highly sensitive index of sympathetic tone, based on time-frequency analysis of EDA signals. Its efficacy was tested using experiments designed to elicit sympathetic dynamics. Twelve subjects underwent four tests known to elicit sympathetic tone arousal: cold pressor, tilt table, stand test, and the Stroop task. We hypothesize that a more sensitive measure of sympathetic control can be developed using time-varying spectral analysis. Variable frequency complex demodulation, a recently developed technique for time-frequency analysis, was used to obtain spectral amplitudes associated with EDA. We found that the time-varying spectral frequency band 0.08-0.24 Hz was most responsive to stimulation. Spectral power for frequencies higher than 0.24 Hz were determined to be not related to the sympathetic dynamics because they comprised less than 5% of the total power. The mean value of time-varying spectral amplitudes in the frequency band 0.08-0.24 Hz were used as the index of sympathetic tone, termed TVSymp. TVSymp was found to be overall the most sensitive to the stimuli, as evidenced by a low coefficient of variation (0.54), and higher consistency (intra-class correlation, 0.96) and sensitivity (Youden's index > 0.75), area under the receiver operating characteristic (ROC) curve (>0.8, accuracy > 0.88) compared with time-domain and time-invariant spectral indices, including heart rate variability. Copyright © 2016 the American Physiological Society.

Ionospheric effects to antenna impedance

NASA Technical Reports Server (NTRS)

Bethke, K. H.

1986-01-01

The reciprocity between high power satellite antennas and the surrounding plasma are examined. The relevant plasma states for antenna impedance calculations are presented and plasma models, and hydrodynamic and kinetic theory, are discussed. A theory from which a variation in antenna impedance with regard to the radiated power can be calculated for a frequency range well above the plasma resonance frequency is give. The theory can include photo and secondary emission effects in antenna impedance calculations.

Air Force Engineering Research Initiation Grant Program

DTIC Science & Technology

1994-06-21

MISFET Structures for High-Frequency Device Applications" RI-B-91-13 Prof. John W. Silvestro Clemson University "The Effect of Scattering by a Near...Synthesis Method for Concurrent Engineering Applications" RI-B-92-03 Prof. Steven H. Collicott Purdue University "An Experimental Study of the Effect of a ...beams is studied. The effect of interply delam- inations on natural frequencies and mode shapes is evaluated analytically. A generalized variational

Electrical Energy Reduction for Army Installations.

DTIC Science & Technology

1981-05-01

noted from Figure 2. The total connected transformer capacity on this circuit is 3280 kVA, of which 187 kVA is the connected transformer capacity of...means that the motor requires less total current. Lower line current means that less energy is wasted in the feeder circuits serving the motor. Variation...affected by such means as Frequency Modulation (FM) signals to receivers on the equipment, or by high-frequency power line carrier signic to receiving

RELATIONSHIP BETWEEN LOW AND HIGH FREQUENCIES IN {delta} SCUTI STARS: PHOTOMETRIC KEPLER AND SPECTROSCOPIC ANALYSES OF THE RAPID ROTATOR KIC 8054146

DOE Office of Scientific and Technical Information (OSTI.GOV)

Breger, M.; Robertson, P.; Fossati, L.

2012-11-01

Two years of Kepler data of KIC 8054146 ({delta} Sct/{gamma} Dor hybrid) revealed 349 statistically significant frequencies between 0.54 and 191.36 cycles day{sup -1} (6.3 {mu}Hz to 2.21 mHz). The 117 low frequencies cluster in specific frequency bands, but do not show the equidistant period spacings predicted for gravity modes of successive radial order, n, and reported for at least one other hybrid pulsator. The four dominant low frequencies in the 2.8-3.0 cycles day{sup -1} (32-35 {mu}Hz) range show strong amplitude variability with timescales of months and years. These four low frequencies also determine the spacing of the higher frequenciesmore » in and beyond the {delta} Sct pressure-mode frequency domain. In fact, most of the higher frequencies belong to one of three families with spacings linked to a specific dominant low frequency. In the Fourier spectrum, these family regularities show up as triplets, high-frequency sequences with absolutely equidistant frequency spacings, side lobes (amplitude modulations), and other regularities in frequency spacings. Furthermore, within two families the amplitude variations between the low and high frequencies are related. We conclude that the low frequencies (gravity modes, rotation) and observed high frequencies (mostly pressure modes) are physically connected. This unusual behavior may be related to the very rapid rotation of the star: from a combination of high- and low-resolution spectroscopy we determined that KIC 8054146 is a very fast rotator ({upsilon} sin i = 300 {+-} 20 km s{sup -1}) with an effective temperature of 7600 {+-} 200 K and a surface gravity log g of 3.9 {+-} 0.3. Several astrophysical ideas explaining the origin of the relationship between the low and high frequencies are explored.« less

Variation of coda wave attenuation in the Alborz region and central Iran

NASA Astrophysics Data System (ADS)

Rahimi, H.; Motaghi, K.; Mukhopadhyay, S.; Hamzehloo, H.

2010-06-01

More than 340 earthquakes recorded by the Institute of Geophysics, University of Tehran (IGUT) short period stations from 1996 to 2004 were analysed to estimate the S-coda attenuation in the Alborz region, the northern part of the Alpine-Himalayan orogen in western Asia, and in central Iran, which is the foreland of this orogen. The coda quality factor, Qc, was estimated using the single backscattering model in frequency bands of 1-25 Hz. In this research, lateral and depth variation of Qc in the Alborz region and central Iran are studied. It is observed that in the Alborz region there is absence of significant lateral variation in Qc. The average frequency relation for this region is Qc = 79 +/- 2f1.07+/-0.08. Two anomalous high-attenuation areas in central Iran are recognized around the stations LAS and RAZ. The average frequency relation for central Iran excluding the values of these two stations is Qc = 94 +/- 2f0.97+/-0.12. To investigate the attenuation variation with depth, Qc value was calculated for 14 lapse times (25, 30, 35,... 90s) for two data sets having epicentral distance range R < 100 km (data set 1) and 100 < R < 200 km (data set 2) in each area. It is observed that Qc increases with depth. However, the rate of increase of Qc with depth is not uniform in our study area. Beneath central Iran the rate of increase of Qc is greater at depths less than 100 km compared to that at larger depths indicating the existence of a high attenuation anomalous structure under the lithosphere of central Iran. In addition, below ~180 km, the Qc value does not vary much with depth under both study areas, indicating the presence of a transparent mantle under them.

Automated surface-scanning detection of pathogenic bacteria on fresh produce

NASA Astrophysics Data System (ADS)

Horikawa, Shin; Du, Songtao; Liu, Yuzhe; Chen, I.-Hsuan; Xi, Jianguo; Crumpler, Michael S.; Sirois, Donald L.; Best, Steve R.; Wikle, Howard C.; Chin, Bryan A.

2017-05-01

This paper investigates the effects of surface-scanning detector position on the resonant frequency and signal amplitude of a wireless magnetoelastic (ME) biosensor for direct pathogen detection on solid surfaces. The experiments were conducted on the surface of a flat polyethylene (PE) plate as a model study. An ME biosensor (1 mm × 0.2 mm × 30 μm) was placed on the PE surface, and a surface-scanning detector was brought close and aligned to the sensor for wireless resonant frequency measurement. The position of the detector was accurately controlled by using a motorized three-axis translation system (i.e., controlled X, Y, and Z positions). The results showed that the resonant frequency variations of the sensor were -125 to +150 Hz for X and Y detector displacements of +/-600 μm and Z displacements of +100 to +500 μm. These resonant frequency variations were small compared to the sensor's initial resonant frequency (< 0.007% of 2.2 MHz initial resonant frequency) measured at the detector home position, indicating high accuracy of the measurement. In addition, the signal amplitude was, as anticipated, found to decrease exponentially with increasing detection distance (i.e., Z distance). Finally, additional experiments were conducted on the surface of cucumbers. Similar results were obtained.

Seismic Wave Propagation in Fully Anisotropic Axisymmetric Media: Applications and Practical Considerations

NASA Astrophysics Data System (ADS)

van Driel, Martin; Nissen-Meyer, Tarje; Stähler, Simon; Waszek, Lauren; Hempel, Stefanie; Auer, Ludwig; Deuss, Arwen

2014-05-01

We present a numerical method to compute high-frequency 3D elastic waves in fully anisotropic axisymmetric media. The method is based on a decomposition of the wavefield into a series of uncoupled 2D equations, for which the dependence of the wavefield on the azimuth can be solved analytically. The remaining 2D problems are then solved using a spectral element method (AxiSEM). AxiSEM was recently published open-source (Nissen-Meyer et al. 2014) as a production ready code capable to compute global seismic wave propagation up to frequencies of ~2Hz. It accurately models visco-elastic dissipation and anisotropy (van Driel et al., submitted to GJI) and runs efficiently on HPC resources using up to 10K cores. At very short period, the Fresnel Zone of body waves is narrow and sensitivity is focused around the geometrical ray. In cases where the azimuthal variations of structural heterogeneity exhibit long spatial wavelengths, so called 2.5D simulations (3D wavefields in 2D models) provide a good approximation. In AxiSEM, twodimensional variations in the source-receiver plane are effectively modelled as ringlike structures extending in the out-of-plane direction. In contrast to ray-theory, which is widely used in high-frequency applications, AxiSEM provides complete waveforms, thus giving access to frequency dependency, amplitude variations, and peculiar wave effects such as diffraction and caustics. Here we focus on the practical implications of the inherent axisymmetric geometry and show how the 2.5D-features of our method method can be used to model realistic anisotropic structures, by applying it to problems such as the D" region and the inner core.

Preferential flows and soil moistures on a Benggang slope: Determined by the water and temperature co-monitoring

NASA Astrophysics Data System (ADS)

Tao, Yu; He, Yangbo; Duan, Xiaoqian; Zou, Ziqiang; Lin, Lirong; Chen, Jiazhou

2017-10-01

Soil preferential flow (PF) has important effects on rainfall infiltration, moisture distribution, and hydrological and ecological process; but it is very difficult to monitor and characterize on a slope. In this paper, soil water and soil temperature at 20, 40, 60, 80 cm depths in six positions were simultaneously monitored at high frequency to confirm the occurrence of PF at a typical Benggang slope underlain granite residual deposits, and to determine the interaction of soil moisture distribution and Benggang erosion. In the presence of PF, the soil temperature was first (half to one hour) governed by the rainwater temperature, then (more than one hour) governed by the upper soil temperature; in the absence of PF (only matrix flow, MF), the soil temperature was initially governed by the upper soil temperature, then by the rainwater temperature. The results confirmed the water replacement phenomenon in MF, thus it can be distinguished from PF by additional temperature monitoring. It indicates that high frequency moisture and temperature monitoring can determine the occurrence of PF and reveal the soil water movement. The distribution of soil water content and PF on the different positions of the slope showed that a higher frequency of PF resulted in a higher variation of average of water content. The frequency of PF at the lower position can be three times as that of the upper position, therefore, the variation coefficient of soil water content increased from 4.67% to 12.68% at the upper position to 8.18%-33.12% at the lower position, where the Benggang erosion (soil collapse) was more possible. The results suggest strong relationships between PF, soil water variation, and collapse activation near the Benggang wall.

Influence of functional group on the electrical transport properties of polyvinyl alcohol grafted multiwall carbon nanotube composite thick film

NASA Astrophysics Data System (ADS)

Kumar Das, Amit; Dharmana, Reuben; Mukherjee, Ayan; Baba, Koumei; Hatada, Ruriko; Kumar Meikap, Ajit

2018-04-01

We present a novel technique to obtain a higher or lower value of dielectric constant due to the variation of a functional group on the surface of multiwall carbon nanotube (MWCNTs) for a polyvinyl alcohol (PVA) grafted MWCNT system. We have prepared PVA grafted pristine and different types of functionalized (-COOH, -OH, and -NH2) MWCNT nanocomposite films. The strong interfacial interaction between the host PVA matrix and nanofiller is characterized by different experimental techniques. The frequency variation of the electrical transport properties of the composite films is investigated in a wide temperature range (303 ≤ T ≤ 413 K) and frequency range (20 Hz ≤ f ≤ 1 MHz). The dielectric constant of the amine (-NH2) functionalized MWCNT incorporated PVA film is about 2 times higher than that of the pristine MWCNT embedded PVA film. The temperature variation of the dielectric constant shows an anomalous behaviour. The modified Cole-Cole equation simulated the experimentally observed dielectric spectroscopy at high temperature. The ac conductivity of the composite films obeys the correlated barrier hopping model. The imaginary part of the electric modulus study shows the ideal Debye-type behaviour at low frequency and deviation of that at high frequency. To illustrate the impedance spectroscopy of the nanocomposite films, we have proposed an impedance based battery equivalent circuit model. The current-voltage characteristic shows hysteresis behaviour of the nanocomposite films. The trap state height for all composite films is evaluated by simulating the current density-electric field data with the Poole-Frenkel emission model. This investigation opens a new avenue for designing electronic devices with a suitable combination of cost effective soft materials.

Qualitative analysis of MTEM response using instantaneous attributes

NASA Astrophysics Data System (ADS)

Fayemi, Olalekan; Di, Qingyun

2017-11-01

This paper introduces new technique for qualitative analysis of multi-transient electromagnetic (MTEM) earth impulse response over complex geological structures. Instantaneous phase and frequency attributes were used in place of the conventional common offset section for improved qualitative interpretation of MTEM data by obtaining more detailed information from the earth impulse response. The instantaneous attributes were used to describe the lateral variation in subsurface resistivity and the visible geological structure with respect to given offsets. Instantaneous phase attribute was obtained by converting the impulse response into a complex form using the Hilbert transform. Conversely, the polynomial phase difference (PPD) estimator was favored over the center finite difference (CFD) approximation method in calculating the instantaneous frequency attribute because it is computationally efficient and has the ability to give a smooth variation of the instantaneous frequency over a common offset section. The observed results from the instantaneous attributes were in good agreement with both the subsurface model used and the apparent resistivity section obtained from the MTEM earth impulse response. Hence, this study confirms the capability of both instantaneous phase and frequency attributes as highly effective tools for MTEM qualitative analysis.

Direct ambient noise tomography for 3-D near surface shear velocity structure: methodology and applications

NASA Astrophysics Data System (ADS)

Yao, H.; Fang, H.; Li, C.; Liu, Y.; Zhang, H.; van der Hilst, R. D.; Huang, Y. C.

2014-12-01

Ambient noise tomography has provided essential constraints on crustal and uppermost mantle shear velocity structure in global seismology. Recent studies demonstrate that high frequency (e.g., ~ 1 Hz) surface waves between receivers at short distances can be successfully retrieved from ambient noise cross-correlation and then be used for imaging near surface or shallow crustal shear velocity structures. This approach provides important information for strong ground motion prediction in seismically active area and overburden structure characterization in oil and gas fields. Here we propose a new tomographic method to invert all surface wave dispersion data for 3-D variations of shear wavespeed without the intermediate step of phase or group velocity maps.The method uses frequency-dependent propagation paths and a wavelet-based sparsity-constrained tomographic inversion. A fast marching method is used to compute, at each period, surface wave traveltimes and ray paths between sources and receivers. This avoids the assumption of great-circle propagation that is used in most surface wave tomographic studies, but which is not appropriate in complex media. The wavelet coefficients of the velocity model are estimated with an iteratively reweighted least squares (IRLS) algorithm, and upon iterations the surface wave ray paths and the data sensitivity matrix are updated from the newly obtained velocity model. We apply this new method to determine the 3-D near surface wavespeed variations in the Taipei basin of Taiwan, Hefei urban area and a shale and gas production field in China using the high-frequency interstation Rayleigh wave dispersion data extracted from ambient noisecross-correlation. The results reveal strong effects of off-great-circle propagation of high-frequency surface waves in these regions with above 30% shear wavespeed variations. The proposed approach is more efficient and robust than the traditional two-step surface wave tomography for imaging complex structures. In the future, approximate 3-D sensitivity kernels for dispersion data will be incorporated to account for finite-frequency effect of surface wave propagation. In addition, our approach provides a consistent framework for joint inversion of surface wave dispersion and body wave traveltime data for 3-D Vp and Vs structures.

Surface electromyography based muscle fatigue detection using high-resolution time-frequency methods and machine learning algorithms.

PubMed

Karthick, P A; Ghosh, Diptasree Maitra; Ramakrishnan, S

2018-02-01

Surface electromyography (sEMG) based muscle fatigue research is widely preferred in sports science and occupational/rehabilitation studies due to its noninvasiveness. However, these signals are complex, multicomponent and highly nonstationary with large inter-subject variations, particularly during dynamic contractions. Hence, time-frequency based machine learning methodologies can improve the design of automated system for these signals. In this work, the analysis based on high-resolution time-frequency methods, namely, Stockwell transform (S-transform), B-distribution (BD) and extended modified B-distribution (EMBD) are proposed to differentiate the dynamic muscle nonfatigue and fatigue conditions. The nonfatigue and fatigue segments of sEMG signals recorded from the biceps brachii of 52 healthy volunteers are preprocessed and subjected to S-transform, BD and EMBD. Twelve features are extracted from each method and prominent features are selected using genetic algorithm (GA) and binary particle swarm optimization (BPSO). Five machine learning algorithms, namely, naïve Bayes, support vector machine (SVM) of polynomial and radial basis kernel, random forest and rotation forests are used for the classification. The results show that all the proposed time-frequency distributions (TFDs) are able to show the nonstationary variations of sEMG signals. Most of the features exhibit statistically significant difference in the muscle fatigue and nonfatigue conditions. The maximum number of features (66%) is reduced by GA and BPSO for EMBD and BD-TFD respectively. The combination of EMBD- polynomial kernel based SVM is found to be most accurate (91% accuracy) in classifying the conditions with the features selected using GA. The proposed methods are found to be capable of handling the nonstationary and multicomponent variations of sEMG signals recorded in dynamic fatiguing contractions. Particularly, the combination of EMBD- polynomial kernel based SVM could be used to detect the dynamic muscle fatigue conditions. Copyright © 2017 Elsevier B.V. All rights reserved.

Complex demodulation in VLBI estimation of high frequency Earth rotation components

NASA Astrophysics Data System (ADS)

Böhm, S.; Brzeziński, A.; Schuh, H.

2012-12-01

The spectrum of high frequency Earth rotation variations contains strong harmonic signal components mainly excited by ocean tides along with much weaker non-harmonic fluctuations driven by irregular processes like the diurnal thermal tides in the atmosphere and oceans. In order to properly investigate non-harmonic phenomena a representation in time domain is inevitable. We present a method, operating in time domain, which is easily applicable within Earth rotation estimation from Very Long Baseline Interferometry (VLBI). It enables the determination of diurnal and subdiurnal variations, and is still effective with merely diurnal parameter sampling. The features of complex demodulation are used in an extended parameterization of polar motion and universal time which was implemented into a dedicated version of the Vienna VLBI Software VieVS. The functionality of the approach was evaluated by comparing amplitudes and phases of harmonic variations at tidal periods (diurnal/semidiurnal), derived from demodulated Earth rotation parameters (ERP), estimated from hourly resolved VLBI ERP time series and taken from a recently published VLBI ERP model to the terms of the conventional model for ocean tidal effects in Earth rotation recommended by the International Earth Rotation and Reference System Service (IERS). The three sets of tidal terms derived from VLBI observations extensively agree among each other within the three-sigma level of the demodulation approach, which is below 6 μas for polar motion and universal time. They also coincide in terms of differences to the IERS model, where significant deviations primarily for several major tidal terms are apparent. An additional spectral analysis of the as well estimated demodulated ERP series of the ter- and quarterdiurnal frequency bands did not reveal any significant signal structure. The complex demodulation applied in VLBI parameter estimation could be demonstrated a suitable procedure for the reliable reproduction of high frequency Earth rotation components and thus represents a qualified tool for future studies of irregular geophysical signals in ERP measured by space geodetic techniques.

Does infectious disease cause global variation in the frequency of intrastate armed conflict and civil war?

PubMed

Letendre, Kenneth; Fincher, Corey L; Thornhill, Randy

2010-08-01

Geographic and cross-national variation in the frequency of intrastate armed conflict and civil war is a subject of great interest. Previous theory on this variation has focused on the influence on human behaviour of climate, resource competition, national wealth, and cultural characteristics. We present the parasite-stress model of intrastate conflict, which unites previous work on the correlates of intrastate conflict by linking frequency of the outbreak of such conflict, including civil war, to the intensity of infectious disease across countries of the world. High intensity of infectious disease leads to the emergence of xenophobic and ethnocentric cultural norms. These cultures suffer greater poverty and deprivation due to the morbidity and mortality caused by disease, and as a result of decreased investment in public health and welfare. Resource competition among xenophobic and ethnocentric groups within a nation leads to increased frequency of civil war. We present support for the parasite-stress model with regression analyses. We find support for a direct effect of infectious disease on intrastate armed conflict, and support for an indirect effect of infectious disease on the incidence of civil war via its negative effect on national wealth. We consider the entanglements of feedback of conflict into further reduced wealth and increased incidence of disease, and discuss implications for international warfare and global patterns of wealth and imperialism.

The ultrasonic characteristics of high frequency modulated arc and its application in material processing.

PubMed

He, Longbiao; Yang, Ping; Li, Luming; Wu, Minsheng

2014-12-01

To solve the difficulty of introducing traditional ultrasonic transducers to welding molten pool, high frequency current is used to modulate plasma arc and ultrasonic wave is excited successfully. The characteristics of the excited ultrasonic field are studied. The results show that the amplitude-frequency response of the ultrasonic emission is flat. The modulating current is the main factor influencing the ultrasonic power and the sound pressure depends on the variation of arc plasma stream force. Experimental study of the welding structure indicates grain refinement by the ultrasonic emission of the modulated arc and the test results showed there should be an energy region for the arc ultrasonic to get best welding joints. Copyright © 2014 Elsevier B.V. All rights reserved.

On the Influence of Global Warming on Atlantic Hurricane Frequency

NASA Astrophysics Data System (ADS)

Hosseini, S. R.; Scaioni, M.; Marani, M.

2018-04-01

In this paper, the possible connection between the frequency of Atlantic hurricanes to the climate change, mainly the variation in the Atlantic Ocean surface temperature has been investigated. The correlation between the observed hurricane frequency for different categories of hurricane's intensity and Sea Surface Temperature (SST) has been examined over the Atlantic Tropical Cyclogenesis Regions (ACR). The results suggest that in general, the frequency of hurricanes have a high correlation with SST. In particular, the frequency of extreme hurricanes with Category 5 intensity has the highest correlation coefficient (R = 0.82). In overall, the analyses in this work demonstrates the influence of the climate change condition on the Atlantic hurricanes and suggest a strong correlation between the frequency of extreme hurricanes and SST in the ACR.

High-Resolution P'P' Precursor Imaging of Nazca-South America Plate Boundary Zones and Inferences for Transition Zone Temperature and Composition

NASA Astrophysics Data System (ADS)

Gu, Y. J.; Schultz, R.

2013-12-01

Knowledge of upper mantle transition zone stratification and composition is highly dependent on our ability to efficiently extract and properly interpret small seismic arrivals. A promising high-frequency seismic phase group particularly suitable for a global analysis is P'P' precursors, which are capable of resolving mantle structures at vertical and lateral resolution of approximately 5 and 200 km, respectively, owing to their shallow incidence angle and small, quasi-symmetric Fresnel zones. This study presents a simultaneous analysis of SS and P'P' precursors based on deconvolution, Radon transform and depth migration. Our multi-resolution survey of the mantle near Nazca-South America subduction zone reveals both olivine and garnet related transitions at depth below 400 km. We attribute a depressed 660 to thermal variations, whereas compositional variations atop the upper-mantle transition zone are needed to explain the diminished or highly complex reflected/scattered signals from the 410 km discontinuity. We also observe prominent P'P' reflections within the transition zone, especially near the plate boundary zone where anomalously high reflection amplitudes result from a sharp (~10 km thick) mineral phase change resonant with the dominant frequency of the P'P' precursors. Near the base of the upper mantle, the migration of SS precursors shows no evidence of split reflections near the 660-km discontinuity, but potential majorite-ilmenite (590-640 km) and ilmenite-perovskite transitions (740-750 km) are identified based on similarly processed high-frequency P'P' precursors. At nominal mantle temperatures these two phase changes may be seismically indistinguishable, but colder mantle conditions from the descending Nazca plate, the presence of water and variable Fe contents may cause sufficient separation for a reliable analysis. In addition, our preliminary results provide compelling evidence for multiple shallow lower-mantle reflections (at ~800 km) along the elongated plate boundary zones of South America. Slab stagnation at the base of the transition zone could play a key role, though a proper interpretation of this finding would likely entail compositional (rather than strictly thermal) variations in the vicinity of the descending oceanic crust and lithosphere. Overall, the resolution and sensitivity differences between low/intermediate- S and high-frequency P wave reflections are key considerations toward reconciling seismic and mineralogical models of transition zone structure, both at the study location and worldwide.

Analysis of skin blood microflow oscillations in patients with rheumatic diseases

NASA Astrophysics Data System (ADS)

Mizeva, Irina; Makovik, Irina; Dunaev, Andrey; Krupatkin, Alexander; Meglinski, Igor

2017-07-01

Laser Doppler flowmetry (LDF) has been applied for the assessment of variation in blood microflows in patients with rheumatic diseases and healthy volunteers. Oscillations of peripheral blood microcirculation observed by LDF have been analyzed utilizing a wavelet transform. A higher amplitude of blood microflow oscillations has been observed in a high frequency band (over 0.1 Hz) in patients with rheumatic diseases. Oscillations in the high frequency band decreased in healthy volunteers in response to the cold pressor test, whereas lower frequency pulsations prevailed in patients with rheumatic diseases. A higher perfusion rate at normal conditions was observed in patients, and a weaker response to cold stimulation was observed in healthy volunteers. Analysis of blood microflow oscillations has a high potential for evaluation of mechanisms of blood flow regulation and diagnosis of vascular abnormalities associated with rheumatic diseases.

Quantification of autonomic nervous activity by heart rate variability and approximate entropy in high ultrafiltration rate during hemodialysis.

PubMed

Tsuji, Yoshihiro; Suzuki, Naoki; Hitomi, Yasumasa; Yoshida, Toshiko; Mizuno-Matsumoto, Yuko

2017-06-01

Few studies have focused on the imbalance of the autonomic nervous system in ultrafiltration rate (UFR) subjects without blood pressure variation during maintenance hemodialysis (HD), although the role of autonomic nervous system activation during HD has been proposed to be an important factor for the maintenance of blood pressure. Variations over time in autonomic nervous activity due to differences in UFR were evaluated by measuring heart rate variability (HRV) and approximate entropy (ApEn) in 35 HD patients without blood pressure variations during HD session. The subjects were divided into 3 groups, those with UFR <10 ml/h/kg; ≥10 ml/h/kg but ≤15 ml/h/kg; and >15 ml/h/kg, and Holter ECG was recorded continuously during HD session using frequency analysis of RR intervals. High frequency (HF) and low frequency (LF) spectral components are found to be representative of the parasympathetic nervous system and sympathovagal balance, respectively, with the ratio of LF to HF of HRV providing a measure of sympathetic nervous system. In subjects with UFR >15 ml/h/kg, HF components were significantly lower, and LF/HF and ApEn values were significantly higher, in the latter half of an HD session than before starting HD. Removing water from these subjects would promote sustained sympathetic nervous overactivity. These findings indicate that the UFR during HD needs to be set at ≤15 ml/h/kg.

Formant-Frequency Variation and Informational Masking of Speech by Extraneous Formants: Evidence Against Dynamic and Speech-Specific Acoustical Constraints

PubMed Central

2014-01-01

How speech is separated perceptually from other speech remains poorly understood. Recent research indicates that the ability of an extraneous formant to impair intelligibility depends on the variation of its frequency contour. This study explored the effects of manipulating the depth and pattern of that variation. Three formants (F1+F2+F3) constituting synthetic analogues of natural sentences were distributed across the 2 ears, together with a competitor for F2 (F2C) that listeners must reject to optimize recognition (left = F1+F2C; right = F2+F3). The frequency contours of F1 − F3 were each scaled to 50% of their natural depth, with little effect on intelligibility. Competitors were created either by inverting the frequency contour of F2 about its geometric mean (a plausibly speech-like pattern) or using a regular and arbitrary frequency contour (triangle wave, not plausibly speech-like) matched to the average rate and depth of variation for the inverted F2C. Adding a competitor typically reduced intelligibility; this reduction depended on the depth of F2C variation, being greatest for 100%-depth, intermediate for 50%-depth, and least for 0%-depth (constant) F2Cs. This suggests that competitor impact depends on overall depth of frequency variation, not depth relative to that for the target formants. The absence of tuning (i.e., no minimum in intelligibility for the 50% case) suggests that the ability to reject an extraneous formant does not depend on similarity in the depth of formant-frequency variation. Furthermore, triangle-wave competitors were as effective as their more speech-like counterparts, suggesting that the selection of formants from the ensemble also does not depend on speech-specific constraints. PMID:24842068

The 77 K operation of a multi-resonant power converter

NASA Technical Reports Server (NTRS)

Ray, Biswajit; Gerber, Scott S.; Patterson, Richard L.; Myers, Ira T.

1995-01-01

The liquid-nitrogen temperature (77 K) operation of a 55 W, 200 kHz, 48/28 V zero-voltage switching multi-resonant dc/dc converter designed with commercially available components is reported. Upon dipping the complete converter (power and control circuits) into liquid-nitrogen, the converter performance improved as compared to the room-temperature operation. The switching frequency, resonant frequency, and the characteristic impedance did not change significantly. Accordingly, the zero-voltage switching was maintained from no-load to full-load for the specified line variations. Cryoelectronics can provide high density power converters, especially for high power applications.

Ethnic variations in UK asthma frequency, morbidity, and health-service use: a systematic review and meta-analysis.

PubMed

Netuveli, Gopalakrishnan; Hurwitz, Brian; Levy, Mark; Fletcher, Monica; Barnes, Greta; Durham, Stephen R; Sheikh, Aziz

The frequency of asthma varies between countries, and may also vary between ethnic groups in more geographically confined areas. We sought evidence of such ethnic variations in the UK for asthma frequency, morbidity, and health-services use, and to understand possible reasons for any differences. We searched MEDLINE, EMBASE, CINAHL, PSYCHInfo, PREMEDLINE, HEALTHSTAR, Cambridge Register of Conference Abstracts, the Dissertation and Thesis Database, and the National Registry of Research. Additionally, we searched the bibliographies of reports identified and websites of health authorities, and contacted experts in this discipline. Our main outcomes were comparisons of asthma rate, morbidity, and health-services use. We did meta-analyses using random-effects models. 13 studies contained relevant data. All prevalence studies were of children and showed that south Asian children had a lower frequency of symptoms suggestive of asthma compared with black and white children (pooled rate of history of wheeze in the previous 12 months: south Asians 9.6% [95%CI 8.0-11.2%], black people 16.2% [12.8-19.6%], white people 14.6% [11.5-17.8%]). The pooled frequency of clinician-diagnosed asthma in children followed a similar pattern (south Asians 7.6% [3.7-11.4%], black people 15.0% [3.5-26.5%], white people 10.6% [4.6-16.7%]. However, relative to white people, the risk of admission for asthma in children and adults was higher for south Asians (odds ratio 2.9 [2.4-3.4]) and black people (2.1 [1.8-2.5]). The differences in admission are not explained by differences in asthma frequency between groups; they could relate to ethnic variations in asthma severity, differences in health-seeking behaviour, or difficulties in accessing high-quality primary care services.

Instant Variations in Velocity and Attenuation of Seismic Waves in a Friable Medium Under a Vibrational Dynamic Loading

NASA Astrophysics Data System (ADS)

Geza, N.; Yushin, V.

2007-12-01

Instant variations of the velocities and attenuation of seismic waves in a friable medium subjected to dynamic loading have been studied by new experimental techniques using a powerful seismic vibrator. The half-space below the operating vibrator baseplate was scanned by high-frequency elastic waves, and the recorded fluctuations were exposed to a stroboscopic analysis. It was found that the variations of seismic velocities and attenuation are synchronous with the external vibrational load but have phase shift from it. Instant variations of the seismic waves parameters depend on the magnitude and absolute value of deformation, which generally result in decreasing of the elastic-wave velocities. New experimental techniques have a high sensitivity to the dynamic disturbance in the medium and allow one to detect a weak seismic boundaries. The relaxation process after dynamic vibrational loading were investigated and the results of research are presented.

Inversion climatology at San Jose, California

NASA Technical Reports Server (NTRS)

Morgan, T.; Bornstein, R. D.

1977-01-01

Month-to-month variations in the early morning surface-based and near-noon elevated inversions at San Jose, Calif., were determined from slow rise radiosondes launched during a four-year period. A high frequency of shallow, radiative, surface-based inversions were found in winter during the early morning hours, while during the same period in summer, a low frequency of deeper based inversions arose from a combination of radiative and subsidence processes. The frequency of elevated inversions in the hours near noon was lowest during fall and spring, while inversion bases were highest and thicknesses least during these periods.

High temperature dielectric studies of indium-substituted NiCuZn nanoferrites

NASA Astrophysics Data System (ADS)

Hashim, Mohd.; Raghasudha, M.; Shah, Jyoti; Shirsath, Sagar E.; Ravinder, D.; Kumar, Shalendra; Meena, Sher Singh; Bhatt, Pramod; Alimuddin; Kumar, Ravi; Kotnala, R. K.

2018-01-01

In this study, indium (In3+)-substituted NiCuZn nanostructured ceramic ferrites with a chemical composition of Ni0.5Cu0.25Zn0.25Fe2-xInxO4 (0.0 ≤ x ≤ 0.5) were prepared by chemical synthesis involving sol-gel chemistry. Single phased cubic spinel structure materials were prepared successfully according to X-ray diffraction and transmission electron microscopy analyses. The dielectric properties of the prepared ferrites were measured using an LCR HiTester at temperatures ranging from room temperature to 300 °C at different frequencies from 102 Hz to 5 × 106 Hz. The variations in the dielectric parameters ε‧ and (tanδ) with temperature demonstrated the frequency- and temperature-dependent characteristics due to electron hopping between the ions. The materials had low dielectric loss values in the high frequency range at all temperatures, which makes them suitable for high frequency microwave applications. A qualitative explanation is provided for the dependences of the dielectric constant and dielectric loss tangent on the frequency, temperature, and composition. Mӧssbauer spectroscopy was employed at room temperature to characterize the magnetic behavior.

Examination of Allelic Variation at the Hexokinase Loci of DROSOPHILA PSEUDOOBSCURA and D. PERSIMILIS by Different Methods

PubMed Central

Beckenbach, Andrew T.; Prakash, Satya

1977-01-01

Recently a number of electrophoretic techniques have been applied to reveal the presence of additional genetic variation among the electrophoretic mobility classes of the highly polymorphic xanthine dehydrogenase (XDH ) and esterase-5 (est-5) loci. We examined the hexokinase loci of Drosophila pseudoobscura and D. persimilis using a variety of techniques to determine whether further allelic variation could be revealed for these much less polymorphic loci and to analyze the nature of the known variation at the hexokinase-1 (hex-1) locus. The following studies were conducted: 135 strains of the two species from six localities were examined with buffer pH ranging from 5.5 to 10.0; 40 strains of D. pseudoobscura and 9 strains of D. persimilis from Mather were studied using starch gel concentrations ranging from 8.5 to 15.5% and were examined for differences in heat stability and reactivity to the thiol reagent pCMSA; strains were also tested for susceptibility to urea denaturation and differences in relative activities. Major findings of the work are: (1) No additional allelic variation could be detected at any of the hexokinase loci by applying these techniques. The finding of abundant hidden genetic variation in XDH and est-5 does not extend to all enzyme loci. (2) Evidence from studies using pCMSA indicates that the hex-1 alleles 0.6, 0.8, 1.0 and 1.2 of the two species form a series of unit charge steps. Since the 0.94 allele of D. persimilis has mobility intermediate between 0.8 and 1.0, it is argued that routine electrophoretic techniques are sensitive to at least some conservative amino acid substitutions. (3) Strong correlations were found at the hex-1 locus between low allelic frequency, reduced relative activity and reduced stability to heat and urea denaturation. Since the three sibling species, D. pseudoobscura, D. persimilis and D. miranda, all appear to share a common high frequency allele (1.0) at that locus, these findings are taken as evidence that the observed allelic frequencies are a result of directional selection and mutation, rather than any form of balancing selection. PMID:17248785

Specific food preferences of older adults with a poor appetite. A forced-choice test conducted in various care settings.

PubMed

van der Meij, Barbara S; Wijnhoven, Hanneke A H; Finlayson, Graham S; Oosten, Babette S H; Visser, Marjolein

2015-07-01

A poor appetite in older adults is an important determinant of reduced food intake and undernutrition. Food preferences may influence food intake. The aim of this study was to investigate food preferences of older adults with a poor appetite and compare these with preferences of older adults with a good appetite. Older adults (n = 349, aged 65-101 years) in nursing/residential care homes, hospitals or at home receiving home care participated in a computer-based forced-choice food preference assessment. Self-reported appetite in the past week was classified as 'good' or 'poor' using a validated instrument. Food preferences were determined by counting the relative frequency of choices for food images according to 11 dichotomous categories: high/low 1) protein; 2) fat; 3) carbohydrates; 4) fiber; 5) variation; and 6) animal/vegetarian proteins; 7) sweet/savory taste; 8) solid/liquid texture; 9) dairy/non-dairy; with/without 10) sauce or 11) color variation. Specific food preferences in participants with a poor appetite were identified by one-sample t-tests comparing frequencies to the expected value of 48. Preference differences between those with a good and a poor appetite were analyzed using GLM adjusting for confounders. The results showed that older adults with a poor appetite (n = 113; 32.4%) preferred variation (51.6 vs. 48, P < 0.001), color variation (55.9 vs. 48, P < 0.01), non-dairy (53.0 vs. 48, P < 0.001), high-fiber (51.8 vs. 48, P < 0.05), and solid texture (53.5 vs. 48, P < 0.05). Participants with a poor appetite had a higher frequency score for variation than participants with a good appetite (51.6 vs. 48.5, P < 0.001). In conclusion, older adults with a poor appetite may have specific food preferences. Their preference for variation differs from those with a good appetite. These results may be used to develop meals that are preferred by older adults with poor appetite in order to increase food intake and prevent undernutrition. Copyright © 2015 Elsevier Ltd. All rights reserved.

Turbulence-induced anomalous electron diffusion in the plume of the VASIMR VX-200

NASA Astrophysics Data System (ADS)

Olsen, Christopher; Ballenger, Maxwell; Squire, Jared; Longmier, Benjamin; Carter, Mark; Glover, Tim

2012-10-01

The separation of electrons from magnetic nozzles is critical to the function of the VASIMR engine and is of general importance to the field of electric propulsion. Separation of electrons by means of anomalous cross field diffusion is considered. Plume measurements using spectral analysis of custom high frequency probes characterizes the nature of oscillating electric fields in the expanding magnetic nozzle. The oscillating electric field results in frequency dependent density variations that can lead to anomalously high transport in the absence of collisions mimicking collisional transport. The spatial structure of the fluctuating fields is consistent with turbulence caused by separation of energetic (> 100 eV) non-magnetized ions and low energy magnetized electrons via the modified two-stream instability (MTSI) and generalized lower hybrid drift instability (GLHDI). Electric fields as high as 300 V/m are observed at frequencies up to an order of magnitude above the lower hybrid frequency. The electric field fluctuations dissipate with increasing axial distance consistent with changes in ion flux streamlines as plasma detachment occurs.

Planck intermediate results. XLV. Radio spectra of northern extragalactic radio sources

NASA Astrophysics Data System (ADS)

Planck Collaboration; Ade, P. A. R.; Aghanim, N.; Aller, H. D.; Aller, M. F.; Arnaud, M.; Aumont, J.; Baccigalupi, C.; Banday, A. J.; Barreiro, R. B.; Bartolo, N.; Battaner, E.; Benabed, K.; Benoit-Lévy, A.; Bernard, J.-P.; Bersanelli, M.; Bielewicz, P.; Bonaldi, A.; Bonavera, L.; Bond, J. R.; Borrill, J.; Bouchet, F. R.; Burigana, C.; Calabrese, E.; Catalano, A.; Chiang, H. C.; Christensen, P. R.; Clements, D. L.; Colombo, L. P. L.; Couchot, F.; Crill, B. P.; Curto, A.; Cuttaia, F.; Danese, L.; Davies, R. D.; Davis, R. J.; de Bernardis, P.; de Rosa, A.; de Zotti, G.; Delabrouille, J.; Dickinson, C.; Diego, J. M.; Dole, H.; Donzelli, S.; Doré, O.; Ducout, A.; Dupac, X.; Efstathiou, G.; Elsner, F.; Eriksen, H. K.; Finelli, F.; Forni, O.; Frailis, M.; Fraisse, A. A.; Franceschi, E.; Galeotta, S.; Galli, S.; Ganga, K.; Giard, M.; Giraud-Héraud, Y.; Gjerløw, E.; González-Nuevo, J.; Górski, K. M.; Gruppuso, A.; Gurwell, M. A.; Hansen, F. K.; Harrison, D. L.; Henrot-Versillé, S.; Hernández-Monteagudo, C.; Hildebrandt, S. R.; Hobson, M.; Hornstrup, A.; Hovatta, T.; Hovest, W.; Huffenberger, K. M.; Hurier, G.; Jaffe, A. H.; Jaffe, T. R.; Järvelä, E.; Keihänen, E.; Keskitalo, R.; Kisner, T. S.; Kneissl, R.; Knoche, J.; Kunz, M.; Kurki-Suonio, H.; Lähteenmäki, A.; Lamarre, J.-M.; Lasenby, A.; Lattanzi, M.; Lawrence, C. R.; Leonardi, R.; Levrier, F.; Liguori, M.; Lilje, P. B.; Linden-Vørnle, M.; López-Caniego, M.; Lubin, P. M.; Macías-Pérez, J. F.; Maffei, B.; Maino, D.; Mandolesi, N.; Maris, M.; Martin, P. G.; Martínez-González, E.; Masi, S.; Matarrese, S.; Max-Moerbeck, W.; Meinhold, P. R.; Melchiorri, A.; Mennella, A.; Migliaccio, M.; Mingaliev, M.; Miville-Deschênes, M.-A.; Moneti, A.; Montier, L.; Morgante, G.; Mortlock, D.; Munshi, D.; Murphy, J. A.; Nati, F.; Natoli, P.; Nieppola, E.; Noviello, F.; Novikov, D.; Novikov, I.; Pagano, L.; Pajot, F.; Paoletti, D.; Partridge, B.; Pasian, F.; Pearson, T. J.; Perdereau, O.; Perotto, L.; Pettorino, V.; Piacentini, F.; Piat, M.; Pierpaoli, E.; Plaszczynski, S.; Pointecouteau, E.; Polenta, G.; Pratt, G. W.; Ramakrishnan, V.; Rastorgueva-Foi, E. A.; S Readhead, A. C.; Reinecke, M.; Remazeilles, M.; Renault, C.; Renzi, A.; Richards, J. L.; Ristorcelli, I.; Rocha, G.; Rossetti, M.; Roudier, G.; Rubiño-Martín, J. A.; Rusholme, B.; Sandri, M.; Savelainen, M.; Savini, G.; Scott, D.; Sotnikova, Y.; Stolyarov, V.; Sunyaev, R.; Sutton, D.; Suur-Uski, A.-S.; Sygnet, J.-F.; Tammi, J.; Tauber, J. A.; Terenzi, L.; Toffolatti, L.; Tomasi, M.; Tornikoski, M.; Tristram, M.; Tucci, M.; Türler, M.; Valenziano, L.; Valiviita, J.; Valtaoja, E.; Van Tent, B.; Vielva, P.; Villa, F.; Wade, L. A.; Wehrle, A. E.; Wehus, I. K.; Yvon, D.; Zacchei, A.; Zonca, A.

2016-12-01

Continuum spectra covering centimetre to submillimetre wavelengths are presented for a northern sample of 104 extragalactic radio sources, mainly active galactic nuclei, based on four-epoch Planck data. The nine Planck frequencies, from 30 to 857 GHz, are complemented by a set of simultaneous ground-based radio observations between 1.1 and 37 GHz. The single-survey Planck data confirm that the flattest high-frequency radio spectral indices are close to zero, indicating that the original accelerated electron energy spectrum is much harder than commonly thought, with power-law index around 1.5 instead of the canonical 2.5. The radio spectra peak at high frequencies and exhibit a variety of shapes. For a small set of low-z sources, we find a spectral upturn at high frequencies, indicating the presence of intrinsic cold dust. Variability can generally be approximated by achromatic variations, while sources with clear signatures of evolving shocks appear to be limited to the strongest outbursts.

Modal identification of spindle-tool unit in high-speed machining

NASA Astrophysics Data System (ADS)

Gagnol, Vincent; Le, Thien-Phu; Ray, Pascal

2011-10-01

The accurate knowledge of high-speed motorised spindle dynamic behaviour during machining is important in order to ensure the reliability of machine tools in service and the quality of machined parts. More specifically, the prediction of stable cutting regions, which is a critical requirement for high-speed milling operations, requires the accurate estimation of tool/holder/spindle set dynamic modal parameters. These estimations are generally obtained through Frequency Response Function (FRF) measurements of the non-rotating spindle. However, significant changes in modal parameters are expected to occur during operation, due to high-speed spindle rotation. The spindle's modal variations are highlighted through an integrated finite element model of the dynamic high-speed spindle-bearing system, taking into account rotor dynamics effects. The dependency of dynamic behaviour on speed range is then investigated and determined with accuracy. The objective of the proposed paper is to validate these numerical results through an experiment-based approach. Hence, an experimental setup is elaborated to measure rotating tool vibration during the machining operation in order to determine the spindle's modal frequency variation with respect to spindle speed in an industrial environment. The identification of natural frequencies of the spindle under rotating conditions is challenging, due to the low number of sensors and the presence of many harmonics in the measured signals. In order to overcome these issues and to extract the characteristics of the system, the spindle modes are determined through a 3-step procedure. First, spindle modes are highlighted using the Frequency Domain Decomposition (FDD) technique, with a new formulation at the considered rotating speed. These extracted modes are then analysed through the value of their respective damping ratios in order to separate the harmonics component from structural spindle natural frequencies. Finally, the stochastic properties of the modes are also investigated by considering the probability density of the retained modes. Results show a good correlation between numerical and experiment-based identified frequencies. The identified spindle-tool modal properties during machining allow the numerical model to be considered as representative of the real dynamic properties of the system.

Merging fluxgate and induction coil data to produce low-noise geomagnetic observatory data meeting the INTERMAGNET definitive 1 s data standard

NASA Astrophysics Data System (ADS)

Brunke, Heinz-Peter; Widmer-Schnidrig, Rudolf; Korte, Monika

2017-11-01

For frequencies above 30 mHz the instrument intrinsic noise level of typical fluxgate magnetometers used at geomagnetic observatories usually masks ambient magnetic field variations on magnetically quiet days. This is especially true for stations located at middle and low latitudes, where variations are generally smaller than at high latitudes. INTERMAGNET has set a minimum quality standard for definitive 1 s data. Natural field variations referred to as pulsations (Pc-1, Pc-2, Pi-1) fall in this band. Usually their intensity is so small that they rarely surpass the instrumental noise of fluxgate magnetometers. Moreover, high-quality magnetic field observations in the band 30 mHz-0.5 Hz contain interesting information, e.g., for the study of ionospheric electron interactions with electromagnetic ion cyclotron plasma waves. We propose a method to improve 1 Hz observatory data by merging data from the proven and tested fluxgate magnetometers currently in use with induction coil magnetometers into a single data stream. We show how measurements of both instruments can be combined without information loss or phase distortion. The result is a time series of the magnetic field vector components, combining the benefits of both instruments: long-term stability (fluxgate) and low noise at high frequencies (induction coil). This new data stream fits perfectly into the data management procedures of INTERMAGNET and meets the requirements defined in the definitive 1 s data standard. We describe the applied algorithm and validate the result by comparing power spectra of the fluxgate magnetometer output with the merged signal. Daily spectrograms from the Niemegk observatory show that the resulting data series reveal information at frequencies above 30 mHz that cannot be seen in raw fluxgate data.

Data-driven approach to detect common copy-number variations and frequency profiles in a population-based Korean cohort.

PubMed

Moon, Sanghoon; Kim, Young Jin; Hong, Chang Bum; Kim, Dong-Joon; Lee, Jong-Young; Kim, Bong-Jo

2011-11-01

To date, hundreds of thousands of copy-number variation (CNV) data have been reported using various platforms. The proportion of Asians in these data is, however, relatively small as compared with that of other ethnic groups, such as Caucasians and Yorubas. Because of limitations in platform resolution and the high noise level in signal intensity, in most CNV studies (particularly those using single nucleotide polymorphism arrays), the average number of CNVs in an individual is less than the number of known CNVs. In this study, we ascertained reliable, common CNV regions (CNVRs) and identified actual frequency rates in the Korean population to provide more CNV information. We performed two-stage analyses for detecting structural variations with two platforms. We discovered 576 common CNVRs (88 CNV segments on average in an individual), and 87% (501 of 576) of these CNVRs overlapped by ≥1 bp with previously validated CNV events. Interestingly, from the frequency analysis of CNV profiles, 52 of 576 CNVRs had a frequency rate of <1% in the 8842 individuals. Compared with other common CNV studies, this study found six common CNVRs that were not reported in previous CNV studies. In conclusion, we propose the data-driven detection approach to discover common CNVRs including those of unreported in the previous Korean CNV study while minimizing false positives. Through our approach, we successfully discovered more common CNVRs than previous Korean CNV study and conducted frequency analysis. These results will be a valuable resource for the effective level of CNVs in the Korean population.

Validity of registration of ICD codes and prescriptions in a research database in Swedish primary care: a cross-sectional study in Skaraborg primary care database

PubMed Central

2010-01-01

Background In recent years, several primary care databases recording information from computerized medical records have been established and used for quality assessment of medical care and research. However, to be useful for research purposes, the data generated routinely from every day practice require registration of high quality. In this study we aimed to investigate (i) the frequency and validity of ICD code and drug prescription registration in the new Skaraborg primary care database (SPCD) and (ii) to investigate the sources of variation in this registration. Methods SPCD contains anonymous electronic medical records (ProfDoc III) automatically retrieved from all 24 public health care centres (HCC) in Skaraborg, Sweden. The frequencies of ICD code registration for the selected diagnoses diabetes mellitus, hypertension and chronic cardiovascular disease and the relevant drug prescriptions in the time period between May 2002 and October 2003 were analysed. The validity of data registration in the SPCD was assessed in a random sample of 50 medical records from each HCC (n = 1200 records) using the medical record text as gold standard. The variance of ICD code registration was studied with multi-level logistic regression analysis and expressed as median odds ratio (MOR). Results For diabetes mellitus and hypertension ICD codes were registered in 80-90% of cases, while for congestive heart failure and ischemic heart disease ICD codes were registered more seldom (60-70%). Drug prescription registration was overall high (88%). A correlation between the frequency of ICD coded visits and the sensitivity of the ICD code registration was found for hypertension and congestive heart failure but not for diabetes or ischemic heart disease. The frequency of ICD code registration varied from 42 to 90% between HCCs, and the greatest variation was found at the physician level (MORPHYSICIAN = 4.2 and MORHCC = 2.3). Conclusions Since the frequency of ICD code registration varies between different diagnoses, each diagnosis must be separately validated. Improved frequency and quality of ICD code registration might be achieved by interventions directed towards the physicians where the greatest amount of variation was found. PMID:20416069

Validity of registration of ICD codes and prescriptions in a research database in Swedish primary care: a cross-sectional study in Skaraborg primary care database.

PubMed

Hjerpe, Per; Merlo, Juan; Ohlsson, Henrik; Bengtsson Boström, Kristina; Lindblad, Ulf

2010-04-23

In recent years, several primary care databases recording information from computerized medical records have been established and used for quality assessment of medical care and research. However, to be useful for research purposes, the data generated routinely from every day practice require registration of high quality. In this study we aimed to investigate (i) the frequency and validity of ICD code and drug prescription registration in the new Skaraborg primary care database (SPCD) and (ii) to investigate the sources of variation in this registration. SPCD contains anonymous electronic medical records (ProfDoc III) automatically retrieved from all 24 public health care centres (HCC) in Skaraborg, Sweden. The frequencies of ICD code registration for the selected diagnoses diabetes mellitus, hypertension and chronic cardiovascular disease and the relevant drug prescriptions in the time period between May 2002 and October 2003 were analysed. The validity of data registration in the SPCD was assessed in a random sample of 50 medical records from each HCC (n = 1200 records) using the medical record text as gold standard. The variance of ICD code registration was studied with multi-level logistic regression analysis and expressed as median odds ratio (MOR). For diabetes mellitus and hypertension ICD codes were registered in 80-90% of cases, while for congestive heart failure and ischemic heart disease ICD codes were registered more seldom (60-70%). Drug prescription registration was overall high (88%). A correlation between the frequency of ICD coded visits and the sensitivity of the ICD code registration was found for hypertension and congestive heart failure but not for diabetes or ischemic heart disease.The frequency of ICD code registration varied from 42 to 90% between HCCs, and the greatest variation was found at the physician level (MORPHYSICIAN = 4.2 and MORHCC = 2.3). Since the frequency of ICD code registration varies between different diagnoses, each diagnosis must be separately validated. Improved frequency and quality of ICD code registration might be achieved by interventions directed towards the physicians where the greatest amount of variation was found.

The Superconducting Cavity Stabilized Oscillator

NASA Technical Reports Server (NTRS)

Turneaure, J. P.; Buchman, Saps; Lipa, John

1997-01-01

Superconducting Cavity Stabilized Oscillators (SCSOs) have produced the most stable clocks to date for integration times between 10(exp 2) and 10(exp 3) seconds, achieving a fractional frequency stability of 2 x 10(exp -16) for a sampling time of 100 s. The principal contributors to cavity frequency variations are: (1) acceleration effects due to gravity and vibrations; (2) temperature variations; (3) variations in the energy stored in the cavity; and (4) noise introduced by the frequency stabilization circuit. We discuss the prospects for improvements in all these areas for both ground-based and space-based SCSOs, which may lead to SCSOs with fractional frequency stabilities below 10(exp -17). SCSOs of this frequency stability will be useful for testing fundamental physical principles.

Optical transitions in highly charged californium ions with high sensitivity to variation of the fine-structure constant.

PubMed

Berengut, J C; Dzuba, V A; Flambaum, V V; Ong, A

2012-08-17

We study electronic transitions in highly charged Cf ions that are within the frequency range of optical lasers and have very high sensitivity to potential variations in the fine-structure constant, α. The transitions are in the optical range despite the large ionization energies because they lie on the level crossing of the 5f and 6p valence orbitals in the thallium isoelectronic sequence. Cf(16+) is a particularly rich ion, having several narrow lines with properties that minimize certain systematic effects. Cf(16+) has very large nuclear charge and large ionization energy, resulting in the largest α sensitivity seen in atomic systems. The lines include positive and negative shifters.

Improved imputation accuracy of rare and low-frequency variants using population-specific high-coverage WGS-based imputation reference panel.

PubMed

Mitt, Mario; Kals, Mart; Pärn, Kalle; Gabriel, Stacey B; Lander, Eric S; Palotie, Aarno; Ripatti, Samuli; Morris, Andrew P; Metspalu, Andres; Esko, Tõnu; Mägi, Reedik; Palta, Priit

2017-06-01

Genetic imputation is a cost-efficient way to improve the power and resolution of genome-wide association (GWA) studies. Current publicly accessible imputation reference panels accurately predict genotypes for common variants with minor allele frequency (MAF)≥5% and low-frequency variants (0.5≤MAF<5%) across diverse populations, but the imputation of rare variation (MAF<0.5%) is still rather limited. In the current study, we evaluate imputation accuracy achieved with reference panels from diverse populations with a population-specific high-coverage (30 ×) whole-genome sequencing (WGS) based reference panel, comprising of 2244 Estonian individuals (0.25% of adult Estonians). Although the Estonian-specific panel contains fewer haplotypes and variants, the imputation confidence and accuracy of imputed low-frequency and rare variants was significantly higher. The results indicate the utility of population-specific reference panels for human genetic studies.

Improved imputation accuracy of rare and low-frequency variants using population-specific high-coverage WGS-based imputation reference panel

PubMed Central

Mitt, Mario; Kals, Mart; Pärn, Kalle; Gabriel, Stacey B; Lander, Eric S; Palotie, Aarno; Ripatti, Samuli; Morris, Andrew P; Metspalu, Andres; Esko, Tõnu; Mägi, Reedik; Palta, Priit

2017-01-01

Genetic imputation is a cost-efficient way to improve the power and resolution of genome-wide association (GWA) studies. Current publicly accessible imputation reference panels accurately predict genotypes for common variants with minor allele frequency (MAF)≥5% and low-frequency variants (0.5≤MAF<5%) across diverse populations, but the imputation of rare variation (MAF<0.5%) is still rather limited. In the current study, we evaluate imputation accuracy achieved with reference panels from diverse populations with a population-specific high-coverage (30 ×) whole-genome sequencing (WGS) based reference panel, comprising of 2244 Estonian individuals (0.25% of adult Estonians). Although the Estonian-specific panel contains fewer haplotypes and variants, the imputation confidence and accuracy of imputed low-frequency and rare variants was significantly higher. The results indicate the utility of population-specific reference panels for human genetic studies. PMID:28401899

Frequency spectrum of tantalum at temperatures of 293-2300 K

NASA Astrophysics Data System (ADS)

Semenov, V. A.; Kozlov, Zh. A.; Krachun, L.; Mateescu, G.; Morozov, V. M.; Oprea, A. I.; Oprea, K.; Puchkov, A. V.

2010-05-01

The temperature dependence of the frequency spectrum of tantalum in the temperature range from room temperature to 2300 K has been studied for the first time using inelastic slow-neutron scattering. The inelastic slow-neutron scattering spectra have been measured at different temperatures on a DIN-2PI time-of-flight spectrometer installed at the IBR-2 nuclear reactor (Joint Institute for Nuclear Research, Dubna, Russia) with the use of a TS3000K high-temperature thermostat. From the measured spectra, the frequency spectra of the tantalum crystal lattice have been determined at temperatures of 293, 1584, and 2300 K by the iteration method. As the temperature increases, the frequency spectrum, on the whole, is softened and the specific features manifested themselves at room temperature are smoothed. The variations observed have been explained by the increase in the role of the effects of vibration anharmonism at high temperatures.

TEC variations over North-western Balkan Peninsula before and during the seismic activity of 24th May 2009

NASA Astrophysics Data System (ADS)

Contadakis, M. E.; Arabelos, D. N.; Vergos, G.

2012-04-01

In this paper the Total Electron Content (TEC) data of 8 Global Positioning System (GPS) stations of the EUREF network, 4 close and 4 remote to EQ epicentre stations, which are being provided by IONOLAB (Turkey), were analysed using wavelet analysis and Discrete Fourier Analysis in order to investigate the TEC variations over North-western Balkan Peninsula before and during the seismic activity of 24th of May, 2009. The main conclusions of this analysis are the following. (a) TEC oscillations in a broad range of frequencies occur randomly over a broad area of several hundred km from the earthquake and (b) high frequency oscillations (f ≥ 0.0003Hz, periods T ≤ 60m) seems to point to the location of the earthquake with a questionable accuracy but the fractal characteristics of the frequencies distribution, points to the locus of the earthquake with a rather higher accuracy. We conclude that the LAIC mechanism through acoustic or gravity wave could explain this phenomenology.

TEC variations over the Mediterranean before and during the strong earthquake (M = 6.5) of 12th October 2013 in Crete, Greece

NASA Astrophysics Data System (ADS)

Contadakis, M. E.; Arabelos, D. N.; Vergos, G.; Spatalas, S. D.; Skordilis, M.

In this paper, the total electron content (TEC) data from eight global positioning system (GPS) stations of the EUREF network, provided by IONOLAB (Turkey), were analyzed using discrete Fourier analysis to investigate the TEC variations over the Mediterranean before and during the strong earthquake of 12th October 2013, which occurred west of Crete, Greece. In accordance with the results of similar analyses in the area, the main conclusions of this study are the following: (a) TEC oscillations in a broad range of frequencies occur randomly over an area of several hundred km from the earthquake and (b) high frequency oscillations (f ⩾ 0.0003 Hz, periods T ⩽ 60 m) may point to the location of the earthquake with questionable accuracy. The fractal characteristics of the frequency distribution may point to the locus of the earthquake with higher accuracy. We conclude that the lithosphere-atmosphere-ionosphere coupling (LAIC) mechanism through acoustic or gravity waves could explain this phenomenology.

Diurnal, seasonal and inter-annual variations in the Schumann resonance parameters

NASA Astrophysics Data System (ADS)

Price, Colin; Melnikov, Alexander

2004-09-01

The Schumann resonances (SR) represent an electromagnetic phenomenon in the Earth's atmosphere related to global lightning activity. The spectral characteristics of the SR modes are defined by their resonant mode amplitude, center frequency and half-width (Q-factor). Long-term (4 years) diurnal and seasonal variations of these parameters are presented based on measurements at a field site in the Negev desert, Israel. Variations of the different modes (8, 14 and 20Hz) and the different electromagnetic components (Hns, Hew and Ez) are presented. The power variations of the various modes and components show three dominant maxima in the diurnal cycle related to lightning activity in south-east Asia (0800UT), Africa (1400UT) and South America (2000UT). The largest global lightning activity occurs during the northern hemisphere summer (JJA) with the southern hemisphere summer (DJF) having the least lightning around the globe. The frequency and half-width (Q-factor) variations of the different modes and SR components are fairly complicated in structure, and will need additional theoretical work to explain their variations. However, the frequency variations are in excellent agreement with previous studies, implying that the frequency variations are robust features of the SR. The inter-annual variability of global lightning activity is shown to vary differently for each of the three major source regions of global lightning.

Territorial black-capped chickadee males respond faster to high- than to low-frequency songs in experimentally elevated noise conditions

PubMed Central

Slabbekoorn, Hans; Otter, Ken A.

2017-01-01

Low-frequency urban noise can interfere with avian communication through masking. Some species are able to shift the frequency of their vocalizations upwards in noisy conditions, which may reduce the effects of masking. However, results from playback studies investigating whether or not such vocal changes improve audibility in noisy conditions are not clear; the responses of free-ranging individuals to shifted signals are potentially confounded by functional trade-offs between masking-related audibility and frequency-dependent signal quality. Black-capped chickadees (Poecile atricapillus) naturally sing their songs at several different frequencies as they pitch-shift to match conspecifics during song-matching contests. They are also known to switch to higher song frequencies in response to experimental noise exposure. Each male produces both high- and low-frequency songs and absolute frequency is not a signal of aggression or dominance, making this an interesting species in which to test whether higher-frequency songs are more audible than lower-frequency songs in noisy conditions. We conducted playback studies across southern and central British Columbia, Canada, using paired song stimuli (high- vs low-frequency songs, n = 24 pairs) embedded in synthetic background noise created to match typical urban sound profiles. Over the course of each playback, the signal-to-noise ratio of the song stimuli was gradually increased by raising the amplitude of the song stimuli while maintaining background noise at a constant amplitude. We evaluated variation in how quickly and aggressively territorial males reacted to each of the paired stimuli. We found that males responded more quickly to playbacks of high- than low-frequency songs when high-frequency songs were presented first, but not when low-frequency songs were first. This difference may be explained by high-frequency songs being more audible combined with a carry-over effect resulting in slower responses to the second stimulus due to habituation. We observed no difference in overall aggression between stimuli. These results suggest that high-frequency songs may be more audible under noisy conditions. PMID:28462051

AVO helps seismic imaging in deepwater environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skidmore, C.; Lindsay, R.O.; Ratcliff, D.

1997-11-03

Amplitude and frequency variations related to offset should be analyzed routinely during interpretation of seismic data acquired in deepwater environments. Amplitude variation with offset (AVO) in three dimensions is the key exploration tool in deep waters of the Gulf of Mexico. But application of the tool requires special care. Three-dimensional AVO helps the interpreter understand stratigraphy and the meaning of amplitude anomalies. Used in conjunction with well log data, it can help the interpreter distinguish amplitudes related to the presence of hydrocarbons from those that result from, for example, rock-property changes within a non-hydrocarbon-bearing layer, such as a shale, ormore » residual gas (fizz water) in high-porosity sands. The paper discusses examples from the Gulf of Mexico, will control application, improving detail, and frequency-dependent analysis.« less

Microgeographic and temporal genetic variation in populations of the bluetongue virus vector Culicoides variipennis (Diptera: Ceratopogonidae).

PubMed

Tabachnick, W J

1992-05-01

Seven Colorado populations of the bluetongue virus vector Culicoides varipennis (Coquillett) were analyzed for genetic variation at 19-21 isozyme loci. Permanent populations, which overwinter as larvae, showed little temporal genetic change at 19 loci. PGD and MDH showed seasonal changes in gene frequencies, attributable to selection at two permanent populations. Two temporary populations showed low heterozygosity compared with permanent populations. Independent estimates of gene flow, calculated using FST and the private allele method, were Nm* = 2.15 and 6.95, respectively. Colorado C. variipennis permanent populations showed high levels of gene flow which prevented significant genetic differentiation due to genetic drift. Temporary populations showed significant gene frequency differences from nearby permanent populations due to the "founder effect" associated with chance colonization.

Long-term spectral and temporal behavior of the high-frequency peaked BL LAC object 1ES 1959+650

NASA Astrophysics Data System (ADS)

Backes, M.; Uellenbeck, M.; Hayashida, M.; Satalecka, K.; Tescaro, D.; Terzić, T.; MAGIC Collaboration; Fuhrmann, L.; Nestoras, I.; F-GAMMA project; Lähteenmäki, A.; Tornikoski, M.; Nieppola, E.; Metsähovi; Böttcher, M.; Collmar, W.; Weidinger, M.

2012-12-01

The high-frequency peaked BL Lac object 1ES 1959+650 is well-known for an exceptional outburst, which was observed at very high energy (VHE) γ-rays by the Whipple 10m and HEGRA telescopes in 2002. Remarkably, this outburst lacked associated X-ray emission (a socalled "orphan flare") and by this cannot easily be described by standard Synchrotron Self Compton (SSC) models. Models based on hadronic emission processes have also been proposed to explain the observed behavior. Subsequent multi-wavelength observations during a low flux state at TeV energies in 2006 can, instead, be explained by a standard single-zone SSC model. In this context, 1ES 1959+650 has been regularly monitored by the MAGIC telescope since 2005. During these years, no significant variation in the VHE γ-ray flux has been observed. The low energy part of this is in very good agreement with the high-energy part of the time-integrated energy spectrum as measured by Fermi-LAT. Based on this constant flux level in VHE γ-rays, we assembled the time-integrated spectral energy distribution (SED) of 1ES 1959+650 from radio to VHE γ-rays. Despite the non-variability at very high energies, significant flux and spectral variations have been observed at optical and X-ray frequencies in the meanwhile. Furthermore, the shape of the SED at high energy γ-rays as measured by Fermi-LAT is essentially flat which cannot be explained by either conventional single-zone SSC models, or models invoking external radiation fields (EC).

Effect of driving voltages in dual capacitively coupled radio frequency plasma: A study by nonlinear global model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bora, B., E-mail: bbora@cchen.cl

2015-10-15

On the basis of nonlinear global model, a dual frequency capacitively coupled radio frequency plasma driven by 13.56 MHz and 27.12 MHz has been studied to investigate the influences of driving voltages on the generation of dc self-bias and plasma heating. Fluid equations for the ions inside the plasma sheath have been considered to determine the voltage-charge relations of the plasma sheath. Geometrically symmetric as well as asymmetric cases with finite geometrical asymmetry of 1.2 (ratio of electrodes area) have been considered to make the study more reasonable to experiment. The electrical asymmetry effect (EAE) and finite geometrical asymmetry is found tomore » work differently in controlling the dc self-bias. The amount of EAE has been primarily controlled by the phase angle between the two consecutive harmonics waveforms. The incorporation of the finite geometrical asymmetry in the calculations shift the dc self-bias towards negative polarity direction while increasing the amount of EAE is found to increase the dc self-bias in either direction. For phase angle between the two waveforms ϕ = 0 and ϕ = π/2, the amount of EAE increases significantly with increasing the low frequency voltage, whereas no such increase in the amount of EAE is found with increasing high frequency voltage. In contrast to the geometrically symmetric case, where the variation of the dc self-bias with driving voltages for phase angle ϕ = 0 and π/2 are just opposite in polarity, the variation for the geometrically asymmetric case is different for ϕ = 0 and π/2. In asymmetric case, for ϕ = 0, the dc self-bias increases towards the negative direction with increasing both the low and high frequency voltages, but for the ϕ = π/2, the dc-self bias is increased towards positive direction with increasing low frequency voltage while dc self-bias increases towards negative direction with increasing high frequency voltage.« less

Influence of season and frequency of ejaculation on production of stallion semen for freezing.

PubMed

Magistrini, M; Chanteloube, P; Palmer, E

1987-01-01

In an attempt to define optimal season and ejaculation frequency for frozen semen, semen was collected from 6 stallions (3 horses and 3 ponies) 3 times per week or every day, alternating every week, for 1 year. The semen was evaluated and frozen. All the samples were thawed at the end of the experiment. At collection, fresh semen evaluations showed that winter (as opposed to spring and summer) was associated with low sexual behaviour, small volumes of spermatozoa and gel, high sperm concentration and lower motility. The high ejaculation frequency yielded a decreased volume, concentration of spermatozoa in the ejaculate and slightly improved motility. The quality of thawed semen was analysed by video and microscope estimations for motility and by two staining methods for vitality. No variation was observed according to the ejaculation frequency; the best freezability was obtained in winter but the difference was small compared to between-stallion variability and optimization of frequency and season did not change a 'bad freezer' into a good one.

Variation in mating system among birds: ecological basis revealed by hierarchical comparative analysis of mate desertion

PubMed Central

Owens, I. P. F.; Bennett, P. M.

1997-01-01

Since most bird species are socially monogamous, variation among species in social mating systems is determined largely by variation in the frequency of mate desertion. Mate desertion is expected to occur when the benefits, in terms of additional reproductive opportunities, outweigh the costs, in terms of reduced reproductive success from the present brood. However, despite much research, the relative importance of costs and benefits in explaining mating system variation is not well understood. Here, we investigate this problem using a comparative method. We analyse changes in the frequency of mate desertion at different phylogenetic levels. Differences between orders and families in the frequency of desertion are negatively associated with changes in the potential costs of desertion, but are not associated with changes in the potential benefits of desertion. Conversely, differences among genera and species in the frequency of desertion are positively associated with increases in the potential benefits of desertion, but not with changes in the potential costs of desertion. Hence, we suggest that mate desertion in birds originates through a combination of evolutionary predisposition and ecological facilitation. In particular, ancient changes in life-history strategy determine the costs of desertion and predispose certain lineages to polygamy, while contemporary changes in the distribution of resources determine the benefits of desertion and thereby the likelihood that polygamy will be viable within these lineages. Thus, monogamy can arise via two very different evolutionary pathways. Groups such as albatrosses (Procellariidae) are constrained to social monogamy by the high cost to desertion, irrespective of the potential benefits. However, in groups such as the accentors (Prunellidae), which are predisposed to desertion, monogamy occurs only when the benefits of desertion are very limited. These conclusions emphasise the additional power which a hierarchical approach contributes to the modern comparative method.

Centennial to millennial variations of atmospheric methane during the early Holocene

NASA Astrophysics Data System (ADS)

Yang, Ji-Woong; Ahn, Jinho; Brook, Edward

2015-04-01

Atmospheric CH4 is one of the most important greenhouse gases. Ice core studies revealed strong correlations between millennial CH4 variations and Greenland climate during the last glacial period. However, millennial to sub-millennial CH4 variations during interglacial periods are not well studied. Recently, several high-resolution data sets have been produced for the late Holocene, but it is difficult to distinguish natural- from anthropogenic changes. In contrast, the methane budget of the early Holocene is not affected by anthropogenic disturbances, thus may help us better understand natural CH4 control mechanisms under interglacial climate boundary conditions. Here we present our new high-precision and high-resolution atmospheric CH4 record from Siple Dome ice core, Antarctica that covers the early Holocene. We used our new wet extraction system at Seoul National University that shows a good precision of ~1 ppb. Our data show several tens of ppb of centennial- to millennial CH4 variations and an anti-correlative evolution with Greenland climate on the millennial time scale. The CH4 record could have been affected by many different types of forcing, including temperature, precipitation (monsoon intensity), biomass burning, sea surface temperature, and solar activity. According to our data, early Holocene CH4 is well correlated with records of hematite stained grains (HSG) in North Atlantic sediment records, within age uncertainties. A red-noise spectral analysis yields peaks at frequencies of ~1270 and ~80 years, which are similar to solar frequencies, but further investigations are needed to determine major controlling factor of atmospheric CH4during the early Holocene.

Instabilities of the force-free current configurations

NASA Astrophysics Data System (ADS)

Berseth, V.; Indenbom, M. V.; van der Beek, C. J.; Erb, A.; Walker, E.; Flükiger, R.; Benoit, W.

1996-03-01

Using the magneto-optic technique, it is shown that inductively induced force-free current configurations in high purity YBa2Cu3O7-δ single crystals become unstable above a certain well-defined amplitude and frequency of the variation of the applied perpendicular field.

Pulsation in the presence of a strong magnetic field: the roAp star HD166473

NASA Astrophysics Data System (ADS)

Mathys, G.; Kurtz, D. W.; Elkin, V. G.

2007-09-01

Phase-resolved high-resolution, high signal-to-noise ratio (S/N) observations of the strongly magnetic roAp star HD166473 are analysed. HD166473 was selected as the target of this study because it has one of the strongest magnetic fields of all the roAp stars known with resolved magnetically split lines. Indeed, we show that enhanced pulsation diagnosis can be achieved from consideration of the different pulsation behaviour of the π and σ Zeeman components of the resolved spectral lines. This study is based on a time-series of high spectral resolution observations obtained with the Ultraviolet and Visual Echelle Spectrograph of the Very Large Telescope of the European Southern Observatory. Radial velocity variations due to pulsation are observed in rare earth lines, with amplitudes up to 110ms-1. The variations occur with three frequencies, already detected in photometry, but which can in this work be determined with better precision: 1.833, 1.886 and 1.928mHz. The pulsation amplitudes and phases observed in the rare earth element lines vary with atmospheric height, as is the case in other roAp stars studied in detail. Lines of Fe and of other (mostly non-rare earth) elements do not show any variation to very high precision (1.5ms-1 in the case of Fe). The low amplitudes of the observed variations do not allow the original goal of studying differences between the behaviour of the resolved Zeeman line components to be reached; the S/N achieved in the radial velocity determinations is insufficient to establish definitely the possible existence of such differences. Yet the analysis provides a tantalizing hint at the occurrence of variations of the mean magnetic field modulus with the pulsation frequency, with an amplitude of 21 +/- 5G. Based on observations collected at the European Southern Observatory, Paranal, Chile, as part of programme 067.D-0272. E-mail: gmathys@eso.org

Amerindian mitochondrial DNAs have rare Asian mutations at high frequencies, suggesting they derived from four primary maternal lineages.

PubMed Central

Schurr, T G; Ballinger, S W; Gan, Y Y; Hodge, J A; Merriwether, D A; Lawrence, D N; Knowler, W C; Weiss, K M; Wallace, D C

1990-01-01

The mitochondrial DNA (mtDNA) sequence variation of the South American Ticuna, the Central American Maya, and the North American Pima was analyzed by restriction-endonuclease digestion and oligonucleotide hybridization. The analysis revealed that Amerindian populations have high frequencies of mtDNAs containing the rare Asian RFLP HincII morph 6, a rare HaeIII site gain, and a unique AluI site gain. In addition, the Asian-specific deletion between the cytochrome c oxidase subunit II (COII) and tRNA(Lys) genes was also prevalent in both the Pima and the Maya. These data suggest that Amerindian mtDNAs derived from at least four primary maternal lineages, that new tribal-specific variants accumulated as these mtDNAs became distributed throughout the Americas, and that some genetic variation may have been lost when the progenitors of the Ticuna separated from the North and Central American populations. Images Figure 1 PMID:1968708

Creating Indices Representing the Atmospheric Conditions throughout Japan by Using Frontal Zone Data

NASA Astrophysics Data System (ADS)

Takahashi, N.

2015-12-01

The climate of Japan exhibits mid-latitude and east coast condition characteristics within the continent, which leads to the large meridional range of the frontal migration and the resultant large annual seasonal change. Therefore, describing the long-term behavior of frontal zones is important for understanding the seasonal, interannual, and long-term variations of the Japanese climate. The purpose of this work is to create indices representing the atmospheric conditions throughout Japan by using frontal zone data created by an objective method at pentad intervals for the period 1948-2013. The indexation was conducted by principal component analyses on the distribution maps of the frontal frequencies near frontal zones, which are defined as the latitude indicating the maximum of the frontal frequencies along each longitude in the climatological mean field. This work focuses on the first four factors, PC1-4, which indicate high contribution rates. The distribution maps of factor loadings were interpreted in the following manner as variations of the frontal zone: PC1, north-south variations in the locations of the frontal zone; PC2, frontal frequencies around the frontal zone; PC3, the running direction of the frontal zone, whether northwest-southeast or southwest-northeast; and PC4, west-east variations of the frontal frequencies. These factors could be regarded as the indices representing the atmospheric conditions throughout Japan. The result of correlation analysis among the indices in this work and those representing global climatic phenomena such as Niño3 sea surface temperature (SST), in addition to Pacific decadal and Arctic oscillations, indicated the comprehensive relationships revealed in previous research. Furthermore, several long-term trend characteristics were exhibited, such as the southward shift of frontal zones in mid- and late spring and the increase of frontal frequencies around frontal zones in mid- and late summer. Thus, the simple indices created in this work verify the effectiveness in the investigation of climate change with regard to the seasonal march.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Foxley, Sean, E-mail: sean.foxley@ndcn.ox.ac.uk; Karczmar, Gregory S.; Domowicz, Miriam

Purpose: Widely used MRI methods show brain morphology both in vivo and ex vivo at very high resolution. Many of these methods (e.g., T{sub 2}{sup *}-weighted imaging, phase-sensitive imaging, or susceptibility-weighted imaging) are sensitive to local magnetic susceptibility gradients produced by subtle variations in tissue composition. However, the spectral resolution of commonly used methods is limited to maintain reasonable run-time combined with very high spatial resolution. Here, the authors report on data acquisition at increased spectral resolution, with 3-dimensional high spectral and spatial resolution MRI, in order to analyze subtle variations in water proton resonance frequency and lineshape that reflectmore » local anatomy. The resulting information compliments previous studies based on T{sub 2}{sup *} and resonance frequency. Methods: The proton free induction decay was sampled at high resolution and Fourier transformed to produce a high-resolution water spectrum for each image voxel in a 3D volume. Data were acquired using a multigradient echo pulse sequence (i.e., echo-planar spectroscopic imaging) with a spatial resolution of 50 × 50 × 70 μm{sup 3} and spectral resolution of 3.5 Hz. Data were analyzed in the spectral domain, and images were produced from the various Fourier components of the water resonance. This allowed precise measurement of local variations in water resonance frequency and lineshape, at the expense of significantly increased run time (16–24 h). Results: High contrast T{sub 2}{sup *}-weighted images were produced from the peak of the water resonance (peak height image), revealing a high degree of anatomical detail, specifically in the hippocampus and cerebellum. In images produced from Fourier components of the water resonance at −7.0 Hz from the peak, the contrast between deep white matter tracts and the surrounding tissue is the reverse of the contrast in water peak height images. This indicates the presence of a shoulder in the water resonance that is not present at +7.0 Hz and may be specific to white matter anatomy. Moreover, a frequency shift of 6.76 ± 0.55 Hz was measured between the molecular and granular layers of the cerebellum. This shift is demonstrated in corresponding spectra; water peaks from voxels in the molecular and granular layers are consistently 2 bins apart (7.0 Hz, as dictated by the spectral resolution) from one another. Conclusions: High spectral and spatial resolution MR imaging has the potential to accurately measure the changes in the water resonance in small voxels. This information can guide optimization and interpretation of more commonly used, more rapid imaging methods that depend on image contrast produced by local susceptibility gradients. In addition, with improved sampling methods, high spectral and spatial resolution data could be acquired in reasonable run times, and used for in vivo scans to increase sensitivity to variations in local susceptibility.« less

Single molecule molecular inversion probes for targeted, high-accuracy detection of low-frequency variation.

PubMed

Hiatt, Joseph B; Pritchard, Colin C; Salipante, Stephen J; O'Roak, Brian J; Shendure, Jay

2013-05-01

The detection and quantification of genetic heterogeneity in populations of cells is fundamentally important to diverse fields, ranging from microbial evolution to human cancer genetics. However, despite the cost and throughput advances associated with massively parallel sequencing, it remains challenging to reliably detect mutations that are present at a low relative abundance in a given DNA sample. Here we describe smMIP, an assay that combines single molecule tagging with multiplex targeted capture to enable practical and highly sensitive detection of low-frequency or subclonal variation. To demonstrate the potential of the method, we simultaneously resequenced 33 clinically informative cancer genes in eight cell line and 45 clinical cancer samples. Single molecule tagging facilitated extremely accurate consensus calling, with an estimated per-base error rate of 8.4 × 10(-6) in cell lines and 2.6 × 10(-5) in clinical specimens. False-positive mutations in the single molecule consensus base-calls exhibited patterns predominantly consistent with DNA damage, including 8-oxo-guanine and spontaneous deamination of cytosine. Based on mixing experiments with cell line samples, sensitivity for mutations above 1% frequency was 83% with no false positives. At clinically informative sites, we identified seven low-frequency point mutations (0.2%-4.7%), including BRAF p.V600E (melanoma, 0.2% alternate allele frequency), KRAS p.G12V (lung, 0.6%), JAK2 p.V617F (melanoma, colon, two lung, 0.3%-1.4%), and NRAS p.Q61R (colon, 4.7%). We anticipate that smMIP will be broadly adoptable as a practical and effective method for accurately detecting low-frequency mutations in both research and clinical settings.

Single molecule molecular inversion probes for targeted, high-accuracy detection of low-frequency variation

PubMed Central

Hiatt, Joseph B.; Pritchard, Colin C.; Salipante, Stephen J.; O'Roak, Brian J.; Shendure, Jay

2013-01-01

The detection and quantification of genetic heterogeneity in populations of cells is fundamentally important to diverse fields, ranging from microbial evolution to human cancer genetics. However, despite the cost and throughput advances associated with massively parallel sequencing, it remains challenging to reliably detect mutations that are present at a low relative abundance in a given DNA sample. Here we describe smMIP, an assay that combines single molecule tagging with multiplex targeted capture to enable practical and highly sensitive detection of low-frequency or subclonal variation. To demonstrate the potential of the method, we simultaneously resequenced 33 clinically informative cancer genes in eight cell line and 45 clinical cancer samples. Single molecule tagging facilitated extremely accurate consensus calling, with an estimated per-base error rate of 8.4 × 10−6 in cell lines and 2.6 × 10−5 in clinical specimens. False-positive mutations in the single molecule consensus base-calls exhibited patterns predominantly consistent with DNA damage, including 8-oxo-guanine and spontaneous deamination of cytosine. Based on mixing experiments with cell line samples, sensitivity for mutations above 1% frequency was 83% with no false positives. At clinically informative sites, we identified seven low-frequency point mutations (0.2%–4.7%), including BRAF p.V600E (melanoma, 0.2% alternate allele frequency), KRAS p.G12V (lung, 0.6%), JAK2 p.V617F (melanoma, colon, two lung, 0.3%–1.4%), and NRAS p.Q61R (colon, 4.7%). We anticipate that smMIP will be broadly adoptable as a practical and effective method for accurately detecting low-frequency mutations in both research and clinical settings. PMID:23382536

Predictability and Prediction of Low-Frequency Rainfall Over the Lower Reaches of the Yangtze River Valley on the Time Scale of 20 to 30 days

NASA Astrophysics Data System (ADS)

Yang, Qiuming

2018-01-01

This paper presents a predictability study of the 20-30-day low-frequency rainfall over the lower reaches of the Yangtze River valley (LYRV). This study relies on an extended complex autoregressive (ECAR) model method, which is based on the principal components of the global 850 hPa low-frequency meridional wind. ECAR is a recently advanced climate forecast method, based on data-driven models. It not only reflects the lagged variations information between the leading low-frequency components of the global circulation and rainfall in a complex space, but also displays the ability to describe the synergy variations of low-frequency components of a climate system in a low dimensional space. A 6-year forecast experiment is conducted on the low-frequency rainfall over the LYRV for the extended-range daily forecasts during 2009-2014, based on the time-varying high-order ECAR. These experimental results demonstrate that the useful skills of the real-time forecasts are achieved for an extended lead-time up to 28 days with a fifth-order model, and are also shown to be 27-day lead for forecasts which are initiated from weak intraseasonal oscillation (ISO). This high-order ECAR displays the ability to significantly improve the predictions of the ISO. The analysis of the 20-30-day ISO predictability reveals a predictability limit of about 28-40 days. Therefore, the forecast framework used in this study is determined to have the potential to assist in improving the real-time forecasts for the 20-30-day oscillations related to the heavy rainfall over the LYRV in summer.

The Effect of Variation in Permittivity of Different Tissues on Induced Electric Field in the Brain during Transcranial Magnetic Stimulation

NASA Astrophysics Data System (ADS)

Hadimani, Ravi; Porzig, Konstantin; Crowther, Lawrence; Brauer, Hartmut; Toepfer, Hannes; Jiles, David; Department of Electrical and Computer Engineering, Iowa State University Team; Department of Advanced Electromagnetics, Ilmenau University of Technology Team

2013-03-01

Estimation of electric field in the brain during Transcranial Magnetic Stimulation (TMS) requires knowledge of the electric property of brain tissue. Grey and white matters have unusually high relative permittivities of ~ 106 at low frequencies. However, relative permittivity of cerebrospinal fluid is ~ 102. With such a variation it is necessary to consider the effect of boundaries. A model consisting of 2 hemispheres was used in the model with the properties of one hemisphere kept constant at σ1 = 0.1Sm-1 and ɛr 1 = 10 while the properties of the second hemisphere were changed kept at σ2 = 0.1Sm-1 to 2Sm-1 and ɛr 2 = 102 to 105. A 70 mm diameter double coil was used as the source of the magnetic field. The amplitude of the current in the coil was 5488 A at a frequency of 2.9 kHz. The results show that the electric field, E induced during magnetic stimulation is independent of the relative permittivity, ɛr and varies with the conductivity. Thus the variation in E, calculated with homogeneous and heterogeneous head models was due to variation in conductivity of the tissues and not due to variation in permittivities.

A novel hybrid model for air quality index forecasting based on two-phase decomposition technique and modified extreme learning machine.

PubMed

Wang, Deyun; Wei, Shuai; Luo, Hongyuan; Yue, Chenqiang; Grunder, Olivier

2017-02-15

The randomness, non-stationarity and irregularity of air quality index (AQI) series bring the difficulty of AQI forecasting. To enhance forecast accuracy, a novel hybrid forecasting model combining two-phase decomposition technique and extreme learning machine (ELM) optimized by differential evolution (DE) algorithm is developed for AQI forecasting in this paper. In phase I, the complementary ensemble empirical mode decomposition (CEEMD) is utilized to decompose the AQI series into a set of intrinsic mode functions (IMFs) with different frequencies; in phase II, in order to further handle the high frequency IMFs which will increase the forecast difficulty, variational mode decomposition (VMD) is employed to decompose the high frequency IMFs into a number of variational modes (VMs). Then, the ELM model optimized by DE algorithm is applied to forecast all the IMFs and VMs. Finally, the forecast value of each high frequency IMF is obtained through adding up the forecast results of all corresponding VMs, and the forecast series of AQI is obtained by aggregating the forecast results of all IMFs. To verify and validate the proposed model, two daily AQI series from July 1, 2014 to June 30, 2016 collected from Beijing and Shanghai located in China are taken as the test cases to conduct the empirical study. The experimental results show that the proposed hybrid model based on two-phase decomposition technique is remarkably superior to all other considered models for its higher forecast accuracy. Copyright © 2016 Elsevier B.V. All rights reserved.

Inherited and environmentally induced differences in mutation frequencies between wild strains of Sordaria fimicola from "Evolution Canyon".

PubMed

Lamb, B C; Saleem, M; Scott, W; Thapa, N; Nevo, E

1998-05-01

We have studied whether there is natural genetic variation for mutation frequencies, and whether any such variation is environment-related. Mutation frequencies differed significantly between wild strains of the fungus Sordaria fimicola isolated from a harsher or a milder microscale environment in "Evolution Canyon," Israel. Strains from the harsher, drier, south-facing slope had higher frequencies of new spontaneous mutations and of accumulated mutations than strains from the milder, lusher, north-facing slope. Collective total mutation frequencies over many loci for ascospore pigmentation were 2.3, 3.5 and 4.4% for three strains from the south-facing slope, and 0.9, 1.1, 1.2, 1.3 and 1.3% for five strains from the north-facing slope. Some of this between-slope difference was inherited through two generations of selfing, with average spontaneous mutation frequencies of 1.9% for south-facing slope strains and 0.8% for north-facing slope strains. The remainder was caused by different frequencies of mutations arising in the original environments. There was also significant heritable genetic variation in mutation frequencies within slopes. Similar between-slope differences were found for ascospore germination-resistance to acriflavine, with much higher frequencies in strains from the south-facing slope. Such inherited variation provides a basis for natural selection for optimum mutation rates in each environment.

Inherited and environmentally induced differences in mutation frequencies between wild strains of Sordaria fimicola from "Evolution Canyon".

PubMed Central

Lamb, B C; Saleem, M; Scott, W; Thapa, N; Nevo, E

1998-01-01

We have studied whether there is natural genetic variation for mutation frequencies, and whether any such variation is environment-related. Mutation frequencies differed significantly between wild strains of the fungus Sordaria fimicola isolated from a harsher or a milder microscale environment in "Evolution Canyon," Israel. Strains from the harsher, drier, south-facing slope had higher frequencies of new spontaneous mutations and of accumulated mutations than strains from the milder, lusher, north-facing slope. Collective total mutation frequencies over many loci for ascospore pigmentation were 2.3, 3.5 and 4.4% for three strains from the south-facing slope, and 0.9, 1.1, 1.2, 1.3 and 1.3% for five strains from the north-facing slope. Some of this between-slope difference was inherited through two generations of selfing, with average spontaneous mutation frequencies of 1.9% for south-facing slope strains and 0.8% for north-facing slope strains. The remainder was caused by different frequencies of mutations arising in the original environments. There was also significant heritable genetic variation in mutation frequencies within slopes. Similar between-slope differences were found for ascospore germination-resistance to acriflavine, with much higher frequencies in strains from the south-facing slope. Such inherited variation provides a basis for natural selection for optimum mutation rates in each environment. PMID:9584088

Reliability of EEG Measures of Interaction: A Paradigm Shift Is Needed to Fight the Reproducibility Crisis

PubMed Central

Höller, Yvonne; Uhl, Andreas; Bathke, Arne; Thomschewski, Aljoscha; Butz, Kevin; Nardone, Raffaele; Fell, Jürgen; Trinka, Eugen

2017-01-01

Measures of interaction (connectivity) of the EEG are at the forefront of current neuroscientific research. Unfortunately, test-retest reliability can be very low, depending on the measure and its estimation, the EEG-frequency of interest, the length of the signal, and the population under investigation. In addition, artifacts can hamper the continuity of the EEG signal, and in some clinical situations it is impractical to exclude artifacts. We aimed to examine factors that moderate test-retest reliability of measures of interaction. The study involved 40 patients with a range of neurological diseases and memory impairments (age median: 60; range 21–76; 40% female; 22 mild cognitive impairment, 5 subjective cognitive complaints, 13 temporal lobe epilepsy), and 20 healthy controls (age median: 61.5; range 23–74; 70% female). We calculated 14 measures of interaction based on the multivariate autoregressive model from two EEG-recordings separated by 2 weeks. We characterized test-retest reliability by correlating the measures between the two EEG-recordings for variations of data length, data discontinuity, artifact exclusion, model order, and frequency over all combinations of channels and all frequencies, individually for each subject, yielding a correlation coefficient for each participant. Excluding artifacts had strong effects on reliability of some measures, such as classical, real valued coherence (~0.1 before, ~0.9 after artifact exclusion). Full frequency directed transfer function was highly reliable and robust against artifacts. Variation of data length decreased reliability in relation to poor adjustment of model order and signal length. Variation of discontinuity had no effect, but reliabilities were different between model orders, frequency ranges, and patient groups depending on the measure. Pathology did not interact with variation of signal length or discontinuity. Our results emphasize the importance of documenting reliability, which may vary considerably between measures of interaction. We recommend careful selection of measures of interaction in accordance with the properties of the data. When only short data segments are available and when the signal length varies strongly across subjects after exclusion of artifacts, reliability becomes an issue. Finally, measures which show high reliability irrespective of the presence of artifacts could be extremely useful in clinical situations when exclusion of artifacts is impractical. PMID:28912704

Lamb dip CRDS of highly saturated transitions of water near 1.4 μm

NASA Astrophysics Data System (ADS)

Kassi, S.; Stoltmann, T.; Casado, M.; Daëron, M.; Campargue, A.

2018-02-01

Doppler-free saturated-absorption Lamb dips were measured at sub-Pa pressures on rovibrational lines of H216O near 7180 cm-1, using optical feedback frequency stabilized cavity ring-down spectroscopy. The saturation of the considered lines is so high that at the early stage of the ring down, the cavity loss rate remains unaffected by the absorption. By referencing the laser source to an optical frequency comb, transition frequencies are determined down to 100 Hz precision and kHz accuracy. The developed setup allows resolving highly K-type blended doublets separated by about 10 MHz (to be compared to a HWHM Doppler width on the order of 300 MHz). A comparison with the most recent spectroscopic databases is discussed. The determined K-type splittings are found to be very well predicted by the most recent variational calculations.

Real-time decision support systems: the famine early warning system network

USGS Publications Warehouse

Funk, Christopher C.; Verdin, James P.

2010-01-01

A multi-institutional partnership, the US Agency for International Development’s Famine Early Warning System Network (FEWS NET) provides routine monitoring of climatic, agricultural, market, and socioeconomic conditions in over 20 countries. FEWS NET supports and informs disaster relief decisions that impact millions of people and involve billions of dollars. In this chapter, we focus on some of FEWS NET’s hydrologic monitoring tools, with a specific emphasis on combining “low frequency” and “high frequency” assessment tools. Low frequency assessment tools, tied to water and food balance estimates, enable us to evaluate and map long-term tendencies in food security. High frequency assessments are supported by agrohydrologic models driven by satellite rainfall estimates, such as the Water Requirement Satisfaction Index (WRSI). Focusing on eastern Africa, we suggest that both these high and low frequency approaches are necessary to capture the interaction of slow variations in vulnerability and the relatively rapid onset of climatic shocks.

Response of a hydrothermal system to magmatic heat inferred from temporal variations in the complex frequencies of long-period events at Kusatsu-Shirane Volcano, Japan

USGS Publications Warehouse

Nakano, M.; Kumagai, H.

2005-01-01

We investigate temporal variations in the complex frequencies (frequency and quality factor Q) of long-period (LP) events that occurred at Kusatsu-Shirane Volcano, central Japan. We analyze LP waveforms observed at this volcano in the period between 1988 and 1995, which covers a seismically active period between 1989 and 1993. Systematic temporal variations in the complex frequencies are observed in October-November 1989, July-October 1991, and September 1992-January 1993. We use acoustic properties of a crack filled with hydrothermal fluids to interpret the observed temporal variations in the complex frequencies. The temporal variations in October-November 1989 can be divided into two periods, which are explained by a gradual decrease and increase of a gas-volume fraction in a water-steam mixture in a crack, respectively. The temporal variations in July-October 1991 can be also divided into two periods. These variations in the first and second periods are similar to those observed in November 1989 and in September-November 1992, respectively, and are interpreted as drying of a water-steam mixture and misty gas in a crack, respectively. The repeated nature of the temporal variations observed in similar seasons between July and November suggests the existence of seasonality in the occurrence of LP events. This may be caused by a seasonally variable meteoritic water supply to a hydrothermal system, which may have been heated by the flux of volcanic gases from magma beneath this volcano. ?? 2005 Elsevier B.V. All rights reserved.

Sequence data and association statistics from 12,940 type 2 diabetes cases and controls.

PubMed

Flannick, Jason; Fuchsberger, Christian; Mahajan, Anubha; Teslovich, Tanya M; Agarwala, Vineeta; Gaulton, Kyle J; Caulkins, Lizz; Koesterer, Ryan; Ma, Clement; Moutsianas, Loukas; McCarthy, Davis J; Rivas, Manuel A; Perry, John R B; Sim, Xueling; Blackwell, Thomas W; Robertson, Neil R; Rayner, N William; Cingolani, Pablo; Locke, Adam E; Tajes, Juan Fernandez; Highland, Heather M; Dupuis, Josee; Chines, Peter S; Lindgren, Cecilia M; Hartl, Christopher; Jackson, Anne U; Chen, Han; Huyghe, Jeroen R; van de Bunt, Martijn; Pearson, Richard D; Kumar, Ashish; Müller-Nurasyid, Martina; Grarup, Niels; Stringham, Heather M; Gamazon, Eric R; Lee, Jaehoon; Chen, Yuhui; Scott, Robert A; Below, Jennifer E; Chen, Peng; Huang, Jinyan; Go, Min Jin; Stitzel, Michael L; Pasko, Dorota; Parker, Stephen C J; Varga, Tibor V; Green, Todd; Beer, Nicola L; Day-Williams, Aaron G; Ferreira, Teresa; Fingerlin, Tasha; Horikoshi, Momoko; Hu, Cheng; Huh, Iksoo; Ikram, Mohammad Kamran; Kim, Bong-Jo; Kim, Yongkang; Kim, Young Jin; Kwon, Min-Seok; Lee, Juyoung; Lee, Selyeong; Lin, Keng-Han; Maxwell, Taylor J; Nagai, Yoshihiko; Wang, Xu; Welch, Ryan P; Yoon, Joon; Zhang, Weihua; Barzilai, Nir; Voight, Benjamin F; Han, Bok-Ghee; Jenkinson, Christopher P; Kuulasmaa, Teemu; Kuusisto, Johanna; Manning, Alisa; Ng, Maggie C Y; Palmer, Nicholette D; Balkau, Beverley; Stančáková, Alena; Abboud, Hanna E; Boeing, Heiner; Giedraitis, Vilmantas; Prabhakaran, Dorairaj; Gottesman, Omri; Scott, James; Carey, Jason; Kwan, Phoenix; Grant, George; Smith, Joshua D; Neale, Benjamin M; Purcell, Shaun; Butterworth, Adam S; Howson, Joanna M M; Lee, Heung Man; Lu, Yingchang; Kwak, Soo-Heon; Zhao, Wei; Danesh, John; Lam, Vincent K L; Park, Kyong Soo; Saleheen, Danish; So, Wing Yee; Tam, Claudia H T; Afzal, Uzma; Aguilar, David; Arya, Rector; Aung, Tin; Chan, Edmund; Navarro, Carmen; Cheng, Ching-Yu; Palli, Domenico; Correa, Adolfo; Curran, Joanne E; Rybin, Dennis; Farook, Vidya S; Fowler, Sharon P; Freedman, Barry I; Griswold, Michael; Hale, Daniel Esten; Hicks, Pamela J; Khor, Chiea-Chuen; Kumar, Satish; Lehne, Benjamin; Thuillier, Dorothée; Lim, Wei Yen; Liu, Jianjun; Loh, Marie; Musani, Solomon K; Puppala, Sobha; Scott, William R; Yengo, Loïc; Tan, Sian-Tsung; Taylor, Herman A; Thameem, Farook; Wilson, Gregory; Wong, Tien Yin; Njølstad, Pål Rasmus; Levy, Jonathan C; Mangino, Massimo; Bonnycastle, Lori L; Schwarzmayr, Thomas; Fadista, João; Surdulescu, Gabriela L; Herder, Christian; Groves, Christopher J; Wieland, Thomas; Bork-Jensen, Jette; Brandslund, Ivan; Christensen, Cramer; Koistinen, Heikki A; Doney, Alex S F; Kinnunen, Leena; Esko, Tõnu; Farmer, Andrew J; Hakaste, Liisa; Hodgkiss, Dylan; Kravic, Jasmina; Lyssenko, Valeri; Hollensted, Mette; Jørgensen, Marit E; Jørgensen, Torben; Ladenvall, Claes; Justesen, Johanne Marie; Käräjämäki, Annemari; Kriebel, Jennifer; Rathmann, Wolfgang; Lannfelt, Lars; Lauritzen, Torsten; Narisu, Narisu; Linneberg, Allan; Melander, Olle; Milani, Lili; Neville, Matt; Orho-Melander, Marju; Qi, Lu; Qi, Qibin; Roden, Michael; Rolandsson, Olov; Swift, Amy; Rosengren, Anders H; Stirrups, Kathleen; Wood, Andrew R; Mihailov, Evelin; Blancher, Christine; Carneiro, Mauricio O; Maguire, Jared; Poplin, Ryan; Shakir, Khalid; Fennell, Timothy; DePristo, Mark; de Angelis, Martin Hrabé; Deloukas, Panos; Gjesing, Anette P; Jun, Goo; Nilsson, Peter; Murphy, Jacquelyn; Onofrio, Robert; Thorand, Barbara; Hansen, Torben; Meisinger, Christa; Hu, Frank B; Isomaa, Bo; Karpe, Fredrik; Liang, Liming; Peters, Annette; Huth, Cornelia; O'Rahilly, Stephen P; Palmer, Colin N A; Pedersen, Oluf; Rauramaa, Rainer; Tuomilehto, Jaakko; Salomaa, Veikko; Watanabe, Richard M; Syvänen, Ann-Christine; Bergman, Richard N; Bharadwaj, Dwaipayan; Bottinger, Erwin P; Cho, Yoon Shin; Chandak, Giriraj R; Chan, Juliana Cn; Chia, Kee Seng; Daly, Mark J; Ebrahim, Shah B; Langenberg, Claudia; Elliott, Paul; Jablonski, Kathleen A; Lehman, Donna M; Jia, Weiping; Ma, Ronald C W; Pollin, Toni I; Sandhu, Manjinder; Tandon, Nikhil; Froguel, Philippe; Barroso, Inês; Teo, Yik Ying; Zeggini, Eleftheria; Loos, Ruth J F; Small, Kerrin S; Ried, Janina S; DeFronzo, Ralph A; Grallert, Harald; Glaser, Benjamin; Metspalu, Andres; Wareham, Nicholas J; Walker, Mark; Banks, Eric; Gieger, Christian; Ingelsson, Erik; Im, Hae Kyung; Illig, Thomas; Franks, Paul W; Buck, Gemma; Trakalo, Joseph; Buck, David; Prokopenko, Inga; Mägi, Reedik; Lind, Lars; Farjoun, Yossi; Owen, Katharine R; Gloyn, Anna L; Strauch, Konstantin; Tuomi, Tiinamaija; Kooner, Jaspal Singh; Lee, Jong-Young; Park, Taesung; Donnelly, Peter; Morris, Andrew D; Hattersley, Andrew T; Bowden, Donald W; Collins, Francis S; Atzmon, Gil; Chambers, John C; Spector, Timothy D; Laakso, Markku; Strom, Tim M; Bell, Graeme I; Blangero, John; Duggirala, Ravindranath; Tai, E Shyong; McVean, Gilean; Hanis, Craig L; Wilson, James G; Seielstad, Mark; Frayling, Timothy M; Meigs, James B; Cox, Nancy J; Sladek, Rob; Lander, Eric S; Gabriel, Stacey; Mohlke, Karen L; Meitinger, Thomas; Groop, Leif; Abecasis, Goncalo; Scott, Laura J; Morris, Andrew P; Kang, Hyun Min; Altshuler, David; Burtt, Noël P; Florez, Jose C; Boehnke, Michael; McCarthy, Mark I

2017-12-19

To investigate the genetic basis of type 2 diabetes (T2D) to high resolution, the GoT2D and T2D-GENES consortia catalogued variation from whole-genome sequencing of 2,657 European individuals and exome sequencing of 12,940 individuals of multiple ancestries. Over 27M SNPs, indels, and structural variants were identified, including 99% of low-frequency (minor allele frequency [MAF] 0.1-5%) non-coding variants in the whole-genome sequenced individuals and 99.7% of low-frequency coding variants in the whole-exome sequenced individuals. Each variant was tested for association with T2D in the sequenced individuals, and, to increase power, most were tested in larger numbers of individuals (>80% of low-frequency coding variants in ~82 K Europeans via the exome chip, and ~90% of low-frequency non-coding variants in ~44 K Europeans via genotype imputation). The variants, genotypes, and association statistics from these analyses provide the largest reference to date of human genetic information relevant to T2D, for use in activities such as T2D-focused genotype imputation, functional characterization of variants or genes, and other novel analyses to detect associations between sequence variation and T2D.

Differences of the Solar Magnetic Activity Signature in Velocity and Intensity Helioseismic Observations

NASA Astrophysics Data System (ADS)

Salabert, D.; García, R. A.; Jiménez, A.

2013-12-01

The high-quality, full-disk helioseismic observations continuously collected by the spectrophotometer GOLF and the three photometers VIRGO/SPMs onboard the SoHO spacecraft for 17 years now (since April 11, 1996, apart from the SoHO “vacations”) are absolutely unique for the study of the interior of the Sun and its variability with magnetic activity. Here, we look at the differences in the low-degree oscillation p-mode frequencies between radial velocity and intensity measurements taking into account all the known features of the p-mode profiles (e.g., the opposite peak asymmetry), and of the power spectrum (e.g., the presence of the higher degrees ℓ = 4 and 5 in the signal). We show that the intensity frequencies are higher than the velocity frequencies during the solar cycle with a clear temporal dependence. The response between the individual angular degrees is also different. Time delays are observed between the temporal variations in GOLF and VIRGO frequencies. Such analysis is important in order to put new constraints and to better understand the mechanisms responsible for the temporal variations of the oscillation frequencies with the solar magnetic activity as well as their height dependences in the solar atmosphere. It is also important for the study of the stellar magnetic activity using asteroseismic data.

Comparison of a new integrated current source with the modified Howland circuit for EIT applications.

PubMed

Hong, Hongwei; Rahal, Mohamad; Demosthenous, Andreas; Bayford, Richard H

2009-10-01

Multi-frequency electrical impedance tomography (MF-EIT) systems require current sources that are accurate over a wide frequency range (1 MHz) and with large load impedance variations. The most commonly employed current source design in EIT systems is the modified Howland circuit (MHC). The MHC requires tight matching of resistors to achieve high output impedance and may suffer from instability over a wide frequency range in an integrated solution. In this paper, we introduce a new integrated current source design in CMOS technology and compare its performance with the MHC. The new integrated design has advantages over the MHC in terms of power consumption and area. The output current and the output impedance of both circuits were determined through simulations and measurements over the frequency range of 10 kHz to 1 MHz. For frequencies up to 1 MHz, the measured maximum variation of the output current for the integrated current source is 0.8% whereas for the MHC the corresponding value is 1.5%. Although the integrated current source has an output impedance greater than 1 MOmega up to 1 MHz in simulations, in practice, the impedance is greater than 160 kOmega up to 1 MHz due to the presence of stray capacitance.

Sequence data and association statistics from 12,940 type 2 diabetes cases and controls

PubMed Central

Jason, Flannick; Fuchsberger, Christian; Mahajan, Anubha; Teslovich, Tanya M.; Agarwala, Vineeta; Gaulton, Kyle J.; Caulkins, Lizz; Koesterer, Ryan; Ma, Clement; Moutsianas, Loukas; McCarthy, Davis J.; Rivas, Manuel A.; Perry, John R. B.; Sim, Xueling; Blackwell, Thomas W.; Robertson, Neil R.; Rayner, N William; Cingolani, Pablo; Locke, Adam E.; Tajes, Juan Fernandez; Highland, Heather M.; Dupuis, Josee; Chines, Peter S.; Lindgren, Cecilia M.; Hartl, Christopher; Jackson, Anne U.; Chen, Han; Huyghe, Jeroen R.; van de Bunt, Martijn; Pearson, Richard D.; Kumar, Ashish; Müller-Nurasyid, Martina; Grarup, Niels; Stringham, Heather M.; Gamazon, Eric R.; Lee, Jaehoon; Chen, Yuhui; Scott, Robert A.; Below, Jennifer E.; Chen, Peng; Huang, Jinyan; Go, Min Jin; Stitzel, Michael L.; Pasko, Dorota; Parker, Stephen C. J.; Varga, Tibor V.; Green, Todd; Beer, Nicola L.; Day-Williams, Aaron G.; Ferreira, Teresa; Fingerlin, Tasha; Horikoshi, Momoko; Hu, Cheng; Huh, Iksoo; Ikram, Mohammad Kamran; Kim, Bong-Jo; Kim, Yongkang; Kim, Young Jin; Kwon, Min-Seok; Lee, Juyoung; Lee, Selyeong; Lin, Keng-Han; Maxwell, Taylor J.; Nagai, Yoshihiko; Wang, Xu; Welch, Ryan P.; Yoon, Joon; Zhang, Weihua; Barzilai, Nir; Voight, Benjamin F.; Han, Bok-Ghee; Jenkinson, Christopher P.; Kuulasmaa, Teemu; Kuusisto, Johanna; Manning, Alisa; Ng, Maggie C. Y.; Palmer, Nicholette D.; Balkau, Beverley; Stančáková, Alena; Abboud, Hanna E.; Boeing, Heiner; Giedraitis, Vilmantas; Prabhakaran, Dorairaj; Gottesman, Omri; Scott, James; Carey, Jason; Kwan, Phoenix; Grant, George; Smith, Joshua D.; Neale, Benjamin M.; Purcell, Shaun; Butterworth, Adam S.; Howson, Joanna M. M.; Lee, Heung Man; Lu, Yingchang; Kwak, Soo-Heon; Zhao, Wei; Danesh, John; Lam, Vincent K. L.; Park, Kyong Soo; Saleheen, Danish; So, Wing Yee; Tam, Claudia H. T.; Afzal, Uzma; Aguilar, David; Arya, Rector; Aung, Tin; Chan, Edmund; Navarro, Carmen; Cheng, Ching-Yu; Palli, Domenico; Correa, Adolfo; Curran, Joanne E.; Rybin, Dennis; Farook, Vidya S.; Fowler, Sharon P.; Freedman, Barry I.; Griswold, Michael; Hale, Daniel Esten; Hicks, Pamela J.; Khor, Chiea-Chuen; Kumar, Satish; Lehne, Benjamin; Thuillier, Dorothée; Lim, Wei Yen; Liu, Jianjun; Loh, Marie; Musani, Solomon K.; Puppala, Sobha; Scott, William R.; Yengo, Loïc; Tan, Sian-Tsung; Taylor, Herman A.; Thameem, Farook; Wilson, Gregory; Wong, Tien Yin; Njølstad, Pål Rasmus; Levy, Jonathan C.; Mangino, Massimo; Bonnycastle, Lori L.; Schwarzmayr, Thomas; Fadista, João; Surdulescu, Gabriela L.; Herder, Christian; Groves, Christopher J.; Wieland, Thomas; Bork-Jensen, Jette; Brandslund, Ivan; Christensen, Cramer; Koistinen, Heikki A.; Doney, Alex S. F.; Kinnunen, Leena; Esko, Tõnu; Farmer, Andrew J.; Hakaste, Liisa; Hodgkiss, Dylan; Kravic, Jasmina; Lyssenko, Valeri; Hollensted, Mette; Jørgensen, Marit E.; Jørgensen, Torben; Ladenvall, Claes; Justesen, Johanne Marie; Käräjämäki, Annemari; Kriebel, Jennifer; Rathmann, Wolfgang; Lannfelt, Lars; Lauritzen, Torsten; Narisu, Narisu; Linneberg, Allan; Melander, Olle; Milani, Lili; Neville, Matt; Orho-Melander, Marju; Qi, Lu; Qi, Qibin; Roden, Michael; Rolandsson, Olov; Swift, Amy; Rosengren, Anders H.; Stirrups, Kathleen; Wood, Andrew R.; Mihailov, Evelin; Blancher, Christine; Carneiro, Mauricio O.; Maguire, Jared; Poplin, Ryan; Shakir, Khalid; Fennell, Timothy; DePristo, Mark; de Angelis, Martin Hrabé; Deloukas, Panos; Gjesing, Anette P.; Jun, Goo; Nilsson, Peter; Murphy, Jacquelyn; Onofrio, Robert; Thorand, Barbara; Hansen, Torben; Meisinger, Christa; Hu, Frank B.; Isomaa, Bo; Karpe, Fredrik; Liang, Liming; Peters, Annette; Huth, Cornelia; O'Rahilly, Stephen P; Palmer, Colin N. A.; Pedersen, Oluf; Rauramaa, Rainer; Tuomilehto, Jaakko; Salomaa, Veikko; Watanabe, Richard M.; Syvänen, Ann-Christine; Bergman, Richard N.; Bharadwaj, Dwaipayan; Bottinger, Erwin P.; Cho, Yoon Shin; Chandak, Giriraj R.; Chan, Juliana CN; Chia, Kee Seng; Daly, Mark J.; Ebrahim, Shah B.; Langenberg, Claudia; Elliott, Paul; Jablonski, Kathleen A.; Lehman, Donna M.; Jia, Weiping; Ma, Ronald C. W.; Pollin, Toni I.; Sandhu, Manjinder; Tandon, Nikhil; Froguel, Philippe; Barroso, Inês; Teo, Yik Ying; Zeggini, Eleftheria; Loos, Ruth J. F.; Small, Kerrin S.; Ried, Janina S.; DeFronzo, Ralph A.; Grallert, Harald; Glaser, Benjamin; Metspalu, Andres; Wareham, Nicholas J.; Walker, Mark; Banks, Eric; Gieger, Christian; Ingelsson, Erik; Im, Hae Kyung; Illig, Thomas; Franks, Paul W.; Buck, Gemma; Trakalo, Joseph; Buck, David; Prokopenko, Inga; Mägi, Reedik; Lind, Lars; Farjoun, Yossi; Owen, Katharine R.; Gloyn, Anna L.; Strauch, Konstantin; Tuomi, Tiinamaija; Kooner, Jaspal Singh; Lee, Jong-Young; Park, Taesung; Donnelly, Peter; Morris, Andrew D.; Hattersley, Andrew T.; Bowden, Donald W.; Collins, Francis S.; Atzmon, Gil; Chambers, John C.; Spector, Timothy D.; Laakso, Markku; Strom, Tim M.; Bell, Graeme I.; Blangero, John; Duggirala, Ravindranath; Tai, E. Shyong; McVean, Gilean; Hanis, Craig L.; Wilson, James G.; Seielstad, Mark; Frayling, Timothy M.; Meigs, James B.; Cox, Nancy J.; Sladek, Rob; Lander, Eric S.; Gabriel, Stacey; Mohlke, Karen L.; Meitinger, Thomas; Groop, Leif; Abecasis, Goncalo; Scott, Laura J.; Morris, Andrew P.; Kang, Hyun Min; Altshuler, David; Burtt, Noël P.; Florez, Jose C.; Boehnke, Michael; McCarthy, Mark I.

2017-01-01

To investigate the genetic basis of type 2 diabetes (T2D) to high resolution, the GoT2D and T2D-GENES consortia catalogued variation from whole-genome sequencing of 2,657 European individuals and exome sequencing of 12,940 individuals of multiple ancestries. Over 27M SNPs, indels, and structural variants were identified, including 99% of low-frequency (minor allele frequency [MAF] 0.1–5%) non-coding variants in the whole-genome sequenced individuals and 99.7% of low-frequency coding variants in the whole-exome sequenced individuals. Each variant was tested for association with T2D in the sequenced individuals, and, to increase power, most were tested in larger numbers of individuals (>80% of low-frequency coding variants in ~82 K Europeans via the exome chip, and ~90% of low-frequency non-coding variants in ~44 K Europeans via genotype imputation). The variants, genotypes, and association statistics from these analyses provide the largest reference to date of human genetic information relevant to T2D, for use in activities such as T2D-focused genotype imputation, functional characterization of variants or genes, and other novel analyses to detect associations between sequence variation and T2D. PMID:29257133

Agonistic sounds in the skunk clownfish Amphiprion akallopisos: size-related variation in acoustic features.

PubMed

Colleye, O; Frederich, B; Vandewalle, P; Casadevall, M; Parmentier, E

2009-09-01

Fourteen individuals of the skunk clownfish Amphiprion akallopisos of different sizes and of different sexual status (non-breeder, male or female) were analysed for four acoustic features. Dominant frequency and pulse duration were highly correlated with standard length (r = 0.97), and were not related to sex. Both the dominant frequency and pulse duration were signals conveying information related to the size of the emitter, which implies that these sound characteristics could be useful in assessing size of conspecifics.

Storm-Time VLF Emissions Caused by The Solar Wind Disturbances: A Case Study on 8 December 2013

NASA Astrophysics Data System (ADS)

Manninen, J.; Kleimenova, N. G.; Turunen, T.; Gromova, L. I.

2017-08-01

This study is made of temporal variations of the daytime VLF emissions (1-6 kHz) occurred during the moderate magnetic storm (Kp = 6) on 8 December 2013. The storm was associated with the Coronal Mass Ejection (CME). VLF emissions were recorded in the frequency band of 0.2-39 kHz during the dark winter at Kannuslehto (KAN, L 5.5) in Northern Finland. The results were compared with simultaneous variations in the solar wind and Interplanetary Magnetic Field (IMF). It was found that intense VLF chorus started after the pressure jump in solar wind (from 7 to 12 nPa) under the positive IMF Bz. The VLF emissions occurred in two separate frequency bands. The lower frequency (below 2 kHz) band represents the intense long lasting hiss with right-hand polarization, and in the upper frequency band (above 2 kHz) the left-hand polarized hiss bursts occurred during about 1 hour. The plasmasphere was strongly compressed, and due to that KAN was mapped outside of the plasmapause. We suppose that VLF chorus exited in the magnetosphere by the cyclotron instability of the radiation belt electrons. The low frequency chorus was generated outside of the plasmapause and arrived to KAN along the direction of N-S meridian. The high-frequency band was generated inside of the plasmasphere arrived to KAN almost along the meridian.

Interactive rendering of acquired materials on dynamic geometry using frequency analysis.

PubMed

Bagher, Mahdi Mohammad; Soler, Cyril; Subr, Kartic; Belcour, Laurent; Holzschuch, Nicolas

2013-05-01

Shading acquired materials with high-frequency illumination is computationally expensive. Estimating the shading integral requires multiple samples of the incident illumination. The number of samples required may vary across the image, and the image itself may have high- and low-frequency variations, depending on a combination of several factors. Adaptively distributing computational budget across the pixels for shading is a challenging problem. In this paper, we depict complex materials such as acquired reflectances, interactively, without any precomputation based on geometry. In each frame, we first estimate the frequencies in the local light field arriving at each pixel, as well as the variance of the shading integrand. Our frequency analysis accounts for combinations of a variety of factors: the reflectance of the object projecting to the pixel, the nature of the illumination, the local geometry and the camera position relative to the geometry and lighting. We then exploit this frequency information (bandwidth and variance) to adaptively sample for reconstruction and integration. For example, fewer pixels per unit area are shaded for pixels projecting onto diffuse objects, and fewer samples are used for integrating illumination incident on specular objects.

The ac stark shift and space-borne rubidium atomic clocks

NASA Astrophysics Data System (ADS)

Formichella, V.; Camparo, J.; Sesia, I.; Signorile, G.; Galleani, L.; Huang, M.; Tavella, P.

2016-11-01

Due to its small size, low weight, and low power consumption, the Rb atomic frequency standard (RAFS) is routinely the first choice for atomic timekeeping in space. Consequently, though the device has very good frequency stability (rivaling passive hydrogen masers), there is interest in uncovering the fundamental processes limiting its long-term performance, with the goal of improving the device for future space systems and missions. The ac Stark shift (i.e., light shift) is one of the more likely processes limiting the RAFS' long-term timekeeping ability, yet its manifestation in the RAFS remains poorly understood. In part, this comes from the fact that light-shift induced frequency fluctuations must be quantified in terms of the RAFS' light-shift coefficient and the output variations in the RAFS' rf-discharge lamp, which is a nonlinear inductively-couple plasma (ICP). Here, we analyze the light-shift effect for a family of 10 on-orbit Block-IIR GPS RAFS, examining decade-long records of their on-orbit frequency and rf-discharge lamp fluctuations. We find that the ICP's light intensity variations can take several forms: deterministic aging, jumps, ramps, and non-stationary noise, each of which affects the RAFS' frequency via the light shift. Correlating these light intensity changes with RAFS frequency changes, we estimate the light-shift coefficient, κLS, for the family of RAFS: κLS = -(1.9 ± 0.3) × 10-12/%. The 16% family-wide variation in κLS indicates that while each RAFS may have its own individual κLS, the variance of κLS among similarly designed RAFS can be relatively small. Combining κLS with our estimate of the ICP light intensity's non-stationary noise, we find evidence that random-walk frequency noise in high-quality space-borne RAFS is strongly influenced by the RAFS' rf-discharge lamp via the light shift effect.

Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa.

PubMed

Alkan, Can; Kavak, Pinar; Somel, Mehmet; Gokcumen, Omer; Ugurlu, Serkan; Saygi, Ceren; Dal, Elif; Bugra, Kuyas; Güngör, Tunga; Sahinalp, S Cenk; Özören, Nesrin; Bekpen, Cemalettin

2014-11-07

Turkey is a crossroads of major population movements throughout history and has been a hotspot of cultural interactions. Several studies have investigated the complex population history of Turkey through a limited set of genetic markers. However, to date, there have been no studies to assess the genetic variation at the whole genome level using whole genome sequencing. Here, we present whole genome sequences of 16 Turkish individuals resequenced at high coverage (32×-48×). We show that the genetic variation of the contemporary Turkish population clusters with South European populations, as expected, but also shows signatures of relatively recent contribution from ancestral East Asian populations. In addition, we document a significant enrichment of non-synonymous private alleles, consistent with recent observations in European populations. A number of variants associated with skin color and total cholesterol levels show frequency differentiation between the Turkish populations and European populations. Furthermore, we have analyzed the 17q21.31 inversion polymorphism region (MAPT locus) and found increased allele frequency of 31.25% for H1/H2 inversion polymorphism when compared to European populations that show about 25% of allele frequency. This study provides the first map of common genetic variation from 16 western Asian individuals and thus helps fill an important geographical gap in analyzing natural human variation and human migration. Our data will help develop population-specific experimental designs for studies investigating disease associations and demographic history in Turkey.

Maintenance of genetic variation with a frequency-dependent selection model as compared to the overdominant model.

PubMed

Hedrick, P W

1972-12-01

A frequency-dependent selection model proposed by Huang, Singh and Kojima (1971) was found to be more effective at maintaining genetic variation in a finite population than the overdominant model. The fourth moment parameter of the distribution of unfixed states showed that there was a more platykurtic distribution for the frequency-dependent model. This agreed well with the expected gene frequency change found for an infinite population.

A field experiment demonstrating plant life-history evolution and its eco-evolutionary feedback to seed predator populations.

PubMed

Agrawal, Anurag A; Johnson, Marc T J; Hastings, Amy P; Maron, John L

2013-05-01

The extent to which evolutionary change occurs in a predictable manner under field conditions and how evolutionary changes feed back to influence ecological dynamics are fundamental, yet unresolved, questions. To address these issues, we established eight replicate populations of native common evening primrose (Oenothera biennis). Each population was planted with 18 genotypes in identical frequency. By tracking genotype frequencies with microsatellite DNA markers over the subsequent three years (up to three generations, ≈5,000 genotyped plants), we show rapid and consistent evolution of two heritable plant life-history traits (shorter life span and later flowering time). This rapid evolution was only partially the result of differential seed production; genotypic variation in seed germination also contributed to the observed evolutionary response. Since evening primrose genotypes exhibited heritable variation for resistance to insect herbivores, which was related to flowering time, we predicted that evolutionary changes in genotype frequencies would feed back to influence populations of a seed predator moth that specializes on O. biennis. By the conclusion of the experiment, variation in the genotypic composition among our eight replicate field populations was highly predictive of moth abundance. These results demonstrate how rapid evolution in field populations of a native plant can influence ecological interactions.

Latitudinal variation in the shape of the species body size distribution: an analysis using freshwater fishes.

PubMed

Knouft, Jason H

2004-05-01

Many taxonomic and ecological assemblages of species exhibit a right-skewed body size-frequency distribution when characterized at a regional scale. Although this distribution has been frequently described, factors influencing geographic variation in the distribution are not well understood, nor are mechanisms responsible for distribution shape. In this study, variation in the species body size-frequency distributions of 344 regional communities of North American freshwater fishes is examined in relation to latitude, species richness, and taxonomic composition. Although the distribution of all species of North American fishes is right-skewed, a negative correlation exists between latitude and regional community size distribution skewness, with size distributions becoming left-skewed at high latitudes. This relationship is not an artifact of the confounding relationship between latitude and species richness in North American fishes. The negative correlation between latitude and regional community size distribution skewness is partially due to the geographic distribution of families of fishes and apparently enhanced by a nonrandom geographic distribution of species within families. These results are discussed in the context of previous explanations of factors responsible for the generation of species size-frequency distributions related to the fractal nature of the environment, energetics, and evolutionary patterns of body size in North American fishes.

Polymorphic Variation in Double Strand Break Repair Gene in Indian Population: A Comparative Approach with Worldwide Ethnic Group Variations.

PubMed

Mandal, Raju Kumar; Mittal, Rama Devi

2018-04-01

DNA repair capacity is essential in maintaining cellular functions and homeostasis. Identification of genetic polymorphisms responsible for reduced DNA repair capacity may allow better cancer prevention. Double strand break repair pathway plays critical roles in maintaining genome stability. Present study was conducted to determine distribution of XRCC3 Exon 7 (C18067T, rs861539) and XRCC7 Intron 8 (G6721T, rs7003908) gene polymorphisms in North Indian population and compare with different populations globally. The genotype assays were performed in 224 normal healthy individuals of similar ethnicity using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). Allelic frequencies of wild type were 79% (C) in XRCC3 Exon 7 C > T and 57% (G) in XRCC7 Intron 8 (G > T) 57% (G) observed. On the other hand, the variant allele frequency were 21% (T) in XRCC3 Exon 7 C > T and 43% (T) in XRCC7 Intron 8 G > T respectively. Major differences from other ethnic populations were observed. Our results suggest that frequency in these DNA repair genes exhibit distinctive pattern in India that could be attributed to ethnicity variation. This could assist in high-risk screening of humans exposed to environmental carcinogens and cancer predisposition in different ethnic groups.

Leg kinematics and muscle activity during treadmill running in the cockroach, Blaberus discoidalis: I. Slow running.

PubMed

Watson, J T; Ritzmann, R E

1998-01-01

We have combined high-speed video motion analysis of leg movements with electromyogram (EMG) recordings from leg muscles in cockroaches running on a treadmill. The mesothoracic (T2) and metathoracic (T3) legs have different kinematics. While in each leg the coxa-femur (CF) joint moves in unison with the femurtibia (FT) joint, the relative joint excursions differ between T2 and T3 legs. In T3 legs, the two joints move through approximately the same excursion. In T2 legs, the FT joint moves through a narrower range of angles than the CF joint. In spite of these differences in motion, no differences between the T2 and T3 legs were seen in timing or qualitative patterns of depressor coxa and extensor tibia activity. The average firing frequencies of slow depressor coxa (Ds) and slow extensor tibia (SETi) motor neurons are directly proportional to the average angular velocity of their joints during stance. The average Ds and SETi firing frequency appears to be modulated on a cycle-by-cycle basis to control running speed and orientation. In contrast, while the frequency variations within Ds and SETi bursts were consistent across cycles, the variations within each burst did not parallel variations in the velocity of the relevant joints.

Radio-frequency Bloch-transistor electrometer.

PubMed

Zorin, A B

2001-04-09

A quantum electrometer is proposed which is based on charge modulation of the Josephson supercurrent in the Bloch transistor inserted in a superconducting ring. As this ring is inductively coupled to a high- Q resonance tank circuit, the variations of the charge on the transistor island are converted into variations of amplitude and phase of oscillations in the tank. These variations are amplified and then detected. At sufficiently low temperature of the tank the device sensitivity is determined by the energy resolution of the amplifier, that can be reduced down to the standard quantum limit of 1 / 2Planck's over 2pi. A "back-action-evading" scheme of subquantum limit measurements is proposed.

Periodic Variations in the O - C Diagrams of Five Pulsation Frequencies of the DB White Dwarf EC 20058-5234

NASA Astrophysics Data System (ADS)

Dalessio, J.; Sullivan, D. J.; Provencal, J. L.; Shipman, H. L.; Sullivan, T.; Kilkenny, D.; Fraga, L.; Sefako, R.

2013-03-01

Variations in the pulsation arrival time of five independent pulsation frequencies of the DB white dwarf EC 20058-5234 individually imitate the effects of reflex motion induced by a planet or companion but are inconsistent when considered in unison. The pulsation frequencies vary periodically in a 12.9 year cycle and undergo secular changes that are inconsistent with simple neutrino plus photon-cooling models. The magnitude of the periodic and secular variations increases with the period of the pulsations, possibly hinting that the corresponding physical mechanism is located near the surface of the star. The phase of the periodic variations appears coupled to the sign of the secular variations. The standards for pulsation-timing-based detection of planetary companions around pulsating white dwarfs, and possibly other variables such as subdwarf B stars, should be re-evaluated. The physical mechanism responsible for this surprising result may involve a redistribution of angular momentum or a magnetic cycle. Additionally, variations in a supposed combination frequency are shown to match the sum of the variations of the parent frequencies to remarkable precision, an expected but unprecedented confirmation of theoretical predictions. Based on observations obtained at the Southern Astrophysical Research (SOAR) telescope, which is a joint project of the Ministério da Ciência, Tecnologia, e Inovação (MCTI) da República Federativa do Brasil, the US National Optical Astronomy Observatory (NOAO), the University of North Carolina at Chapel Hill (UNC), and Michigan State University (MSU).

CNV amplitude as a neural correlate for stuttering frequency: A case report of acquired stuttering.

PubMed

Vanhoutte, Sarah; Van Borsel, John; Cosyns, Marjan; Batens, Katja; van Mierlo, Pieter; Hemelsoet, Dimitri; Van Roost, Dirk; Corthals, Paul; De Letter, Miet; Santens, Patrick

2014-11-01

A neural hallmark of developmental stuttering is abnormal articulatory programming. One of the neurophysiological substrates of articulatory preparation is the contingent negative variation (CNV). Unfortunately, CNV tasks are rarely performed in persons who stutter and mainly focus on the effect of task variation rather than on interindividual variation in stutter related variables. However, variations in motor programming seem to be related to variation in stuttering frequency. The current study presents a case report of acquired stuttering following stroke and stroke related surgery in the left superior temporal gyrus. A speech related CNV task was administered at four points in time with differences in stuttering severity and frequency. Unexpectedly, CNV amplitudes at electrode sites approximating bilateral motor and left inferior frontal gyrus appeared to be inversely proportional to stuttering frequency. The higher the stuttering frequency, the lower the activity for articulatory preparation. Thus, the amount of disturbance in motor programming seems to determine stuttering frequency. At right frontal electrodes, a relative increase in CNV amplitude was seen at the test session with most severe stuttering. Right frontal overactivation is cautiously suggested to be a compensation strategy. In conclusion, late CNV amplitude elicited by a relatively simple speech task seems to be able to provide an objective, neural correlate of stuttering frequency. The present case report supports the hypothesis that motor preparation has an important role in stuttering. Copyright © 2014 Elsevier Ltd. All rights reserved.

Vela X-1 pulse timing. II - Variations in pulse frequency

NASA Technical Reports Server (NTRS)

Deeter, J. E.; Boynton, P. E.; Lamb, F. K.; Zylstra, G.

1989-01-01

The pulsed X-ray emission of Vela X-1 during May 1978 and December-January 1978-1979 is investigated analytically on the basis of published satellite observations. The data are compiled in tables and graphs and discussed in detail, with reference to data for the entire 1975-1982 period. Variations in pulse frequency are identified on time scales from 2 to 2600 days; the lower nine octaves are characterized as white noise (or random walk in pulse frequency), while the longer-period variations are attributed to changes in neutron-star rotation rates.

Frequencies of Null Alleles at Enzyme Loci in Natural Populations of Ponderosa and Red Pine

PubMed Central

Allendorf, Fred W.; Knudsen, Kathy L.; Blake, George M.

1982-01-01

Pinus ponderosa and P. resinosa population samples have mean frequencies of enzymatically inactive alleles of 0.0031 and 0.0028 at 29 and 27 enzyme loci, respectively. Such alleles are rare and are apparently maintained by selection-mutation balance. Ponderosa pine have much higher amounts of allozymic and polygenic phenotypic variation than red pine, yet both species have similar frequencies of null alleles. Thus, null alleles apparently do not contribute to polygenic variation, as has been suggested. The concordance between allozymic and polygenic variation adds support to the view that allozyme studies may be valuable in predicting the relative amount of polygenic variation in populations. PMID:17246067

Relaxation phenomena in AOT-water-decane critical and dense microemulsions

NASA Astrophysics Data System (ADS)

Letamendia, L.; Pru-Lestret, E.; Panizza, P.; Rouch, J.; Sciortino, F.; Tartaglia, P.; Hashimoto, C.; Ushiki, H.; Risso, D.

2001-11-01

We report on extensive measurements of the low and high frequencies sound velocity and sound absorption in AOT-water-decane microemulsions deduced from ultrasonic and, for the first time as far as the absorption is concerned, from Brillouin scattering experiments. New experimental results on dielectric relaxation are also reported. Our results, which include data taken for critical as well as dense microemulsions, show new interesting relaxation phenomena. The relaxation frequencies deduced from very high frequency acoustical measurements are in good agreement with new high frequency dielectric relaxation measurements. We show that along the critical isochore, sound dispersion, relaxation frequency, and static dielectric permittivity can be accurately fitted to power laws. The absolute values of the new exponents we derived from experimental data are nearly equal, and they are very close to β=0.33 characterising the shape of the coexistence curve. The exponent characterising the infinite frequency permittivity is very close to 0.04 relevant to the diverging shear viscosity. For dense microemulsions, two well defined relaxation domains have been identified and the temperature variations of the sound absorption and the zero frequency dielectric permittivity bear striking similarities. We also show that the relaxation frequency of the slow relaxation process is almost independent of temperature and volume fraction and so cannot be attributed to percolation phenomena, whereas it can more likely be attributed to an intrinsic relaxation process probably connected to membrane fluctuations.

Prediction of high frequency combustion instability in liquid propellant rocket engines

NASA Technical Reports Server (NTRS)

Kim, Y. M.; Chen, C. P.; Ziebarth, J. P.; Chen, Y. S.

1992-01-01

The present use of a numerical model developed for the prediction of high-frequency combustion stabilities in liquid propellant rocket engines focuses on (1) the overall behavior of nonlinear combustion instabilities (2) the effects of acoustic oscillations on the fuel-droplet vaporization and combustion process in stable and unstable engine operating conditions, oscillating flowfields, and liquid-fuel trajectories during combustion instability, and (3) the effects of such design parameters as inlet boundary conditions, initial spray conditions, and baffle length. The numerical model has yielded predictions of the tangential-mode combustion instability; baffle length and droplet size variations are noted to have significant effects on engine stability.

High-temperature langatate elastic constants and experimental validation up to 900 degrees C.

PubMed

Davulis, Peter M; da Cunha, Mauricio Pereira

2010-01-01

This paper reports on a set of langatate (LGT) elastic constants extracted from room temperature to 1100 degrees C using resonant ultrasound spectroscopy techniques and an accompanying assessment of these constants at high temperature. The evaluation of the constants employed SAW device measurements from room temperature to 900 degrees C along 6 different LGT wafer orientations. Langatate parallelepipeds and wafers were aligned, cut, ground, and polished, and acoustic wave devices were fabricated at the University of Maine facilities along specific orientations for elastic constant extraction and validation. SAW delay lines were fabricated on LGT wafers prepared at the University of Maine using 100-nm platinumrhodium- zirconia electrodes capable of withstanding temperatures up to 1000 degrees C. The numerical predictions based on the resonant ultrasound spectroscopy high-temperature constants were compared with SAW phase velocity, fractional frequency variation, and temperature coefficients of delay extracted from SAW delay line frequency response measurements. In particular, the difference between measured and predicted fractional frequency variation is less than 2% over the 25 degrees C to 900 degrees C temperature range and within the calculated and measured discrepancies. Multiple temperature-compensated orientations at high temperature were predicted and verified in this paper: 4 of the measured orientations had turnover temperatures (temperature coefficient of delay = 0) between 200 and 420 degrees C, and 2 had turnover temperatures below 100 degrees C. In summary, this work reports on extracted high-temperature elastic constants for LGT up to 1100 degrees C, confirmed the validity of those constants by high-temperature SAW device measurements up to 900 degrees C, and predicted and identified temperature-compensated LGT orientations at high temperature.

Analysis of a novel non-contacting waveguide backshort

NASA Technical Reports Server (NTRS)

Weller, T. M.; Katehi, L. P. B.; Mcgrath, William R.

1992-01-01

A new non-contacting waveguide backshort has been developed for millimeter and submillimeter wave frequencies. The design consists of a metal bar with rectangular or circular holes cut into it, which is covered with a dielectric (mylar) layer to form a snug fit with the walls of a waveguide. Hole geometries are adjusted to obtain a periodic variation of the guide impedance on the correct length scale, in order to produce efficient reflection of RF power. It is a mechanically rugged design which can be easily fabricated for frequencies from 1 to 1000 GHz and is thus a sound alternative to the miniaturization of conventional non-contacting shorts. To aid in high-frequency design, a rigorous full-wave analysis has been completed, which will allow variations of the size, number and spacing of the holes to be easily analyzed. This paper will review the backshort design and the method developed for theoretical characterization, followed by a comparison of the experimental and numerical results. Low frequency models operating from 4-6 GHz are shown to demonstrate return loss of greater than -0.2 dB over a 33 percent bandwidth. The theory is in good agreement with measured data.

Measuring sperm movement within the female reproductive tract using Fourier analysis.

PubMed

Nicovich, Philip R; Macartney, Erin L; Whan, Renee M; Crean, Angela J

2015-02-01

The adaptive significance of variation in sperm phenotype is still largely unknown, in part due to the difficulties of observing and measuring sperm movement in its natural, selective environment (i.e., within the female reproductive tract). Computer-assisted sperm analysis systems allow objective and accurate measurement of sperm velocity, but rely on being able to track individual sperm, and are therefore unable to measure sperm movement in species where sperm move in trains or bundles. Here we describe a newly developed computational method for measuring sperm movement using Fourier analysis to estimate sperm tail beat frequency. High-speed time-lapse videos of sperm movement within the female tract of the neriid fly Telostylinus angusticollis were recorded, and a map of beat frequencies generated by converting the periodic signal of an intensity versus time trace at each pixel to the frequency domain using the Fourier transform. We were able to detect small decreases in sperm tail beat frequency over time, indicating the method is sensitive enough to identify consistent differences in sperm movement. Fourier analysis can be applied to a wide range of species and contexts, and should therefore facilitate novel exploration of the causes and consequences of variation in sperm movement.

Production frequency effects in perception of phonological variation

NASA Astrophysics Data System (ADS)

Connine, Cynthia M.; Ranbom, Larissa J.

2004-05-01

Two experiments were conducted that investigated the relationship between phonological variant occurrence frequency (based on a corpus analysis of conversational speech) and auditory word recognition. The variant investigated was an alternation between the presence of [nt] and a nasal flap (e.g., center, cen'er). The corpus analysis showed that 80% of productions are nasal flaps, with wide variability across words (from 0% for ``enter'' to 100% for ``twenty''). In a production goodness rating experiment, listeners rated [nt] productions as better than their nasal flap counterparts. For individual items, a strong positive correlation was found between nasal flap frequency and goodness ratings: words typically produced with nasal flaps were rated as better productions. A lexical decision experiment showed that nasal flap variants were recognized more slowly and less accurately than [nt] versions. The rated quality of the nasal-flapped production was strongly correlated with the results of the lexical decision task: nasal-flapped words considered highly acceptable were recognized more quickly and accurately than words rated as poor nasal flap productions. The results demonstrate a strong relationship between experienced variant frequency and auditory word recognition and suggest that phonological variation is explicitly represented in the mental lexicon.

Development of a Transient Thrust Stand with Sub-Millisecond Resolution

NASA Astrophysics Data System (ADS)

Spells, Corbin Fraser

The transient thrust stand has been developed to offer 0.1 ms time resolved thrust measurements for the characterization of mono-propellant thrusters for spacecraft applications. Results demonstrated that the system was capable of obtaining dynamic thrust profiles within 5 % and 0.1 ms. Measuring and improving the thrust performance of mono-propellant thrusters will require 1 ms time resolved forces to observe shot-to-shot variations, oscillations, and minimum impulse bits. To date, no thrust stand is capable of measuring up to 22 N forces with a time response of up to 10 kHz. Calibration forces up to 22 N with a frequency response greater than 0.1 ms were obtained using voice coil actuators. Steady state and low frequency measurements were obtained using displacement and velocity sensors and were combined with high frequency vibration modes measured using several accelerometers along the thrust stand arm. The system uses a predictor-based subspace algorithm to obtain a high order state space model of the thrust stand capable of defining the high frequency vibration modes. The high frequency vibration modes are necessary to provide the time response of 0.1 ms. Thruster forces are estimated using an augmented Kalman filter to combine sensor traces from four accelerometers, a velocity sensor, and displacement transducer. Combining low frequency displacement data with high frequency acceleration measurements provides accurate force data across a broad time domain. The transient thrust stand uses a torsional pendulum configuration to minimize influence from external vibration and achieve high force resolution independent of thruster weight.

Long-Term ENSO Variation Over the Last 20,000 Years From the Peru Continental Margin

NASA Astrophysics Data System (ADS)

Skilbeck, G.; Fink, D.; Gagan, M.; Rein, B.

2006-12-01

Three ODP Leg 201 cores from the Peru continental margin comprise highly laminated diatomaceous ooze spanning Last Glacial Maximum to present. Geochemical proxy data, layer counting and spectral analysis of red color variation suggest the layers represent interannual accumulation under the influence tropical ENSO conditions, with darker layers representing El Niño events. AMS 14-C dating (Skilbeck &Fink, 2006) of bulk sediment from Sites 201-1228 and -1229 (~11°S) and comparison with Rein et al. (2005) Core SO147-106KL (~12°S) show that where the shelf is narrow south of ~10.5°S, regionally consistent rates of sediment accumulation have occurred over the late Deglaciation and Holocene, with high rates characterising the late (0-2.0 kyrBP, ~100 cm/ka) and the early (8.5-10 kyrBP, ~80 cm/ka) Holocene. Over these intervals laminae are of interannual resolution. Further north where the shelf is broader, Holocene-Late Deglaciation sediments are thin or absent, but the Early Deglaciation is well represented. In a core from ODP Site 201-1227 (~9°S, 427m water depth), the period 15.5-17.5 kyrBP is characterised by sediment accumulation rates in excess of 300 cm/ka, and interannual laminations are again present. Spectral analysis of the instrumental record of ENSO, the SOI, shows a relative stable mode of variation with an average frequency of about 5.5 yr for the past 130 years. Analysis of our ODP cores shows that the ENSO mode appears to be relatively stable for periods of 300-500 years throughout the Holocene with frequencies varying mostly between 5 and 8 years and relatively sudden mode switches, suggesting inter alia that the instrumental record is not long enough to test predictive models of ENSO variation. Throughout the Holocene, this pattern of variation transcends the sedimentation-rate zones identified above, with the inference that changes in the rate of sedimentation have not influenced the temporal pattern. The later part of the deglaciation period (10-14 kyrBP) appears to be a relatively long period of stable ENSO with a repeat frequency between 5 and 6 years. Layer variation over the interval between 14 to 15.5 yrBP loses interannual variability and is characterised by a dominant frequency of ~11-12 yr, but this may simply reflect the low sedimentation rate during this interval. During Early Deglaciation interannual- to decadal-scale layer variability is present, with over 600 discernable laminae recognisable across the ~1600 year interval represented in Core 210-1227B. ENSO during this time has multiple interannual frequency modes ranging between 4 and 10 yr, particularly over the interval 17.2- 16.2 kyrBP, with mode switches slightly more frequent than during the Holocene at between 200 and 300 years. In addition to the interannual laminations and the centennial-scale pattern of frequency mode variation described above, there is a regular oscillatory pattern in the contrast between dark and light laminations which can be traced to parasequence-like packets of laminations on a centimetre scale, and representing variability in the decadal to centennial range. References Rein, B., A. Luckge, et al. (2005). Paleoceanography 20(PA4003): 17p. Skilbeck, C.G. &D. Fink (2005). ODP Scientific Results 201.

Oscillation spectrum of WASP-33 from the MOST photometry

NASA Astrophysics Data System (ADS)

Mkrtichian, David

2015-08-01

We present results of extended continuous time series photometry of the Delta Scuti type pulsating exoplanet host star WASP-33 obtained in two seasons (2011 and 2013) with the MOST space telescope. Our frequency analysis yealds rich, low-amplitude multi-frequency spectrum of oscillation modes. We discuss possible resonances between the orbiital period of the planet and frequencies of the oscillation modes. We present results of our measurements of planets orbital O-C variations and analyze possible existence of invisible planets in the system. We review recent results of the high-resolution spectroscopic campaign on WASP-33 and confirm the retrograde orbital motion of the planet WASP-33b.

Comparison of JPL-AIRSAR and DLR E-SAR images from the MAC Europe 1991 campaign over testsite Oberpfaffenhofen: Frequency and polarization dependent backscatter variations from agricultural fields

NASA Technical Reports Server (NTRS)

Schmullius, C.; Nithack, J.

1992-01-01

On July 12, the MAC Europe '91 (Multi-Sensor Airborne Campaign) took place over test site Oberpfaffenhofen. The DLR Institute of Radio-Frequency Technology participated with its C-VV, X-VV, and X-HH Experimental Synthetic Aperture Radar (E-SAR). The high resolution E-SAR images with a pixel size between 1 and 2 m and the polarimetric AIRSAR images were analyzed. Using both sensors in combination is a unique opportunity to evaluate SAR images in a frequency range from P- to X-band and to investigate polarimetric information.

Fully-resonant, tunable, monolithic frequency conversion as a coherent UVA source.

PubMed

Zielińska, Joanna A; Zukauskas, Andrius; Canalias, Carlota; Noyan, Mehmet A; Mitchell, Morgan W

2017-01-23

We demonstrate a monolithic frequency converter incorporating up to four tuning degrees of freedom, three temperature and one strain, allowing resonance of pump and generated wavelengths simultaneous with optimal phase-matching. With a Rb-doped periodically-poled potassium titanyl phosphate (KTP) implementation, we demonstrate efficient continuous-wave second harmonic generation from 795 to 397, with low-power efficiency of 72% and high-power slope efficiency of 4.5%. The measured performance shows good agreement with theoretical modeling of the device. We measure optical bistability effects, and show how they can be used to improve the stability of the output against pump frequency and amplitude variations.

Utterance rate and linguistic properties as determinants of lexical dysfluencies in children who stutter

PubMed Central

Howell, Peter; Au-Yeung, James; Pilgrim, Lesley

2007-01-01

Two important determinants of variation in stuttering frequency are utterance rate and the linguistic properties of the words being spoken. Little is known how these determinants interrelate. It is hypothesized that those linguistic factors that lead to change in word duration, alter utterance rate locally within an utterance that then gives rise to an increase in stuttering frequency. According to the hypothesis, utterance rate variation should occur locally within the linguistic segments in an utterance that is known to increase the likelihood of stuttering. The hypothesis is tested using length of tone unit as the linguistic factor. Three predictions are confirmed: Utterance rate varies locally within the tone units and this local variation affects stuttering frequency; stuttering frequency is positively related to the length of tone units; variations in utterance rate are correlated with tone unit length. Alternative theoretical formulations of these findings are considered. PMID:9921672

Deep whole-genome sequencing of 90 Han Chinese genomes.

PubMed

Lan, Tianming; Lin, Haoxiang; Zhu, Wenjuan; Laurent, Tellier Christian Asker Melchior; Yang, Mengcheng; Liu, Xin; Wang, Jun; Wang, Jian; Yang, Huanming; Xu, Xun; Guo, Xiaosen

2017-09-01

Next-generation sequencing provides a high-resolution insight into human genetic information. However, the focus of previous studies has primarily been on low-coverage data due to the high cost of sequencing. Although the 1000 Genomes Project and the Haplotype Reference Consortium have both provided powerful reference panels for imputation, low-frequency and novel variants remain difficult to discover and call with accuracy on the basis of low-coverage data. Deep sequencing provides an optimal solution for the problem of these low-frequency and novel variants. Although whole-exome sequencing is also a viable choice for exome regions, it cannot account for noncoding regions, sometimes resulting in the absence of important, causal variants. For Han Chinese populations, the majority of variants have been discovered based upon low-coverage data from the 1000 Genomes Project. However, high-coverage, whole-genome sequencing data are limited for any population, and a large amount of low-frequency, population-specific variants remain uncharacterized. We have performed whole-genome sequencing at a high depth (∼×80) of 90 unrelated individuals of Chinese ancestry, collected from the 1000 Genomes Project samples, including 45 Northern Han Chinese and 45 Southern Han Chinese samples. Eighty-three of these 90 have been sequenced by the 1000 Genomes Project. We have identified 12 568 804 single nucleotide polymorphisms, 2 074 210 short InDels, and 26 142 structural variations from these 90 samples. Compared to the Han Chinese data from the 1000 Genomes Project, we have found 7 000 629 novel variants with low frequency (defined as minor allele frequency < 5%), including 5 813 503 single nucleotide polymorphisms, 1 169 199 InDels, and 17 927 structural variants. Using deep sequencing data, we have built a greatly expanded spectrum of genetic variation for the Han Chinese genome. Compared to the 1000 Genomes Project, these Han Chinese deep sequencing data enhance the characterization of a large number of low-frequency, novel variants. This will be a valuable resource for promoting Chinese genetics research and medical development. Additionally, it will provide a valuable supplement to the 1000 Genomes Project, as well as to other human genome projects. © The Authors 2017. Published by Oxford University Press.

Reproducibility of Holocene atmospheric CO 2 records based on stomatal frequency

NASA Astrophysics Data System (ADS)

Wagner, Friederike; Kouwenberg, Lenny L. R.; van Hoof, Thomas B.; Visscher, Henk

2004-10-01

The majority of the stomatal frequency-based estimates of CO2 for the Holocene do not support the widely accepted concept of comparably stable CO2 concentrations throughout the past 11,500 years. To address the critique that these stomatal frequency variations result from local environmental change or methodological insufficiencies, multiple stomatal frequency records were compared for three climatic key periods during the Holocene, namely the Preboreal oscillation, the 8.2 kyr cooling event and the Little Ice Age. The highly comparable fluctuations in the palaeo-atmospheric CO2 records, which were obtained from different continents and plant species (deciduous angiosperms as well as conifers) using varying calibration approaches, provide strong evidence for the integrity of leaf-based CO2 quantification.

Natural frequencies of thin rectangular plates clamped on contour using the Finite Element Method

NASA Astrophysics Data System (ADS)

(Barboni Haţiegan, L.; Haţiegan, C.; Gillich, G. R.; Hamat, C. O.; Vasile, O.; Stroia, M. D.

2018-01-01

This paper presents the determining of natural frequencies of plates without and with damages using the finite element method of SolidWorks program. The first thirty natural frequencies obtained for thin rectangular rectangular plates clamped on contour without and with central damages a for different dimensions. The relative variation of natural frequency was determined and the obtained results by the finite element method (FEM) respectively relative variation of natural frequency, were graphically represented according to their vibration natural modes. Finally, the obtained results were compared.

TUMOR HAPLOTYPE ASSEMBLY ALGORITHMS FOR CANCER GENOMICS

PubMed Central

AGUIAR, DEREK; WONG, WENDY S.W.; ISTRAIL, SORIN

2014-01-01

The growing availability of inexpensive high-throughput sequence data is enabling researchers to sequence tumor populations within a single individual at high coverage. But, cancer genome sequence evolution and mutational phenomena like driver mutations and gene fusions are difficult to investigate without first reconstructing tumor haplotype sequences. Haplotype assembly of single individual tumor populations is an exceedingly difficult task complicated by tumor haplotype heterogeneity, tumor or normal cell sequence contamination, polyploidy, and complex patterns of variation. While computational and experimental haplotype phasing of diploid genomes has seen much progress in recent years, haplotype assembly in cancer genomes remains uncharted territory. In this work, we describe HapCompass-Tumor a computational modeling and algorithmic framework for haplotype assembly of copy number variable cancer genomes containing haplotypes at different frequencies and complex variation. We extend our polyploid haplotype assembly model and present novel algorithms for (1) complex variations, including copy number changes, as varying numbers of disjoint paths in an associated graph, (2) variable haplotype frequencies and contamination, and (3) computation of tumor haplotypes using simple cycles of the compass graph which constrain the space of haplotype assembly solutions. The model and algorithm are implemented in the software package HapCompass-Tumor which is available for download from http://www.brown.edu/Research/Istrail_Lab/. PMID:24297529

Maintenance of Genetic Variation with a Frequency-Dependent Selection Model as Compared to the Overdominant Model

PubMed Central

Hedrick, Philip W.

1972-01-01

A frequency-dependent selection model proposed by Huang, Singh and Kojima (1971) was found to be more effective at maintaining genetic variation in a finite population than the overdominant model. The fourth moment parameter of the distribution of unfixed states showed that there was a more platykurtic distribution for the frequency-dependent model. This agreed well with the expected gene frequency change found for an infinite population. PMID:4652882

Variational study on the vibrational level structure and vibrational level mixing of highly vibrationally excited S₀ D₂CO.

PubMed

Rashev, Svetoslav; Moule, David C; Rashev, Vladimir

2012-11-01

We perform converged high precision variational calculations to determine the frequencies of a large number of vibrational levels in S(0) D(2)CO, extending from low to very high excess vibrational energies. For the calculations we use our specific vibrational method (recently employed for studies on H(2)CO), consisting of a combination of a search/selection algorithm and a Lanczos iteration procedure. Using the same method we perform large scale converged calculations on the vibrational level spectral structure and fragmentation at selected highly excited overtone states, up to excess vibrational energies of ∼17,000 cm(-1), in order to study the characteristics of intramolecular vibrational redistribution (IVR), vibrational level density and mode selectivity. Copyright © 2012 Elsevier B.V. All rights reserved.

An integrated signal conditioner for high-frequency inductive position sensors

NASA Astrophysics Data System (ADS)

Rahal, Mohamad; Demosthenous, Andreas

2010-01-01

This paper describes the design, implementation and evaluation of a signal conditioner application-specific integrated circuit (ASIC) for high-frequency inductive non-contact position sensors. These sensors employ a radio frequency technology based on an antenna planar arrangement and a resonant target, have a high inherent resolution (0.1% of antenna length) and can measure target position over a wide distance range (<0.1 mm to >10 m). However, due to the relatively high-frequency excitation (1 MHz typically) and to the specific layouts of these sensors, there is unwanted capacitive coupling between the transmitter and receiver coils; this type of distortion reduces linearity and resolution. The ASIC, which is the first generation of its kind for this type of sensor, employs a differential mixer topology which suppresses the capacitive coupling offsets. The system architecture and circuit details are presented. The ASIC was fabricated in a 0.6 µm high-voltage CMOS technology occupying an area of 8 mm2. It dissipates about 30 mA from a 24 V power supply. The ASIC was tested with a high-frequency inductive position sensor (with an antenna length of 10.8 cm). The measured input-referred offset due to transmitter crosstalk is on average about 22 µV over a wide phase difference variation (-99° to +117°) between the transmitter and demodulating signals.

Investigation of conduction and relaxation phenomena in BaZrxTi1-xO3 (x=0.05) by impedance spectroscopy

NASA Astrophysics Data System (ADS)

Mahajan, Sandeep; Haridas, Divya; Ali, S. T.; Munirathnam, N. R.; Sreenivas, K.; Thakur, O. P.; Prakash, Chandra

2014-10-01

In present study we have prepared ferroelectric BaZrxTi1-xO3 (x=0.05) ceramic by conventional solid state reaction route and studied its electrical properties as a function of temperature and frequency. X-ray diffraction (XRD) analysis shows single-phase formation of the compound with orthorhombic crystal structure at room temperature. Impedance and electric modulus spectroscopy analysis in the frequency range of 40 Hz-1 MHz at high temperature (200-600 °C) suggests two relaxation processes with different time constant are involved which are attributed to bulk and grain boundary effects. Frequency dependent dielectric plot at different temperature shows normal variation with frequency while dielectric loss (tanδ) peak was found to obey an Arrhenius law with activation energy of 1.02 eV. The frequency-dependent AC conductivity data were also analyzed in a wide temperature range. In present work we have studied the role of grain and grain boundaries on the electrical behaviour of Zr-doped BaTiO3 and their dependence on temperature and frequency by complex impedance and modulus spectroscopy (CIS) technique in a wide frequency (40 Hz-1 MHz) and high temperature range.

The frequency of HLA-B(∗)57:01 and the risk of abacavir hypersensitivity reactions in the majority population of Costa Rica.

PubMed

Arrieta-Bolaños, Esteban; Madrigal, J Alejandro; Marsh, Steven G E; Shaw, Bronwen E; Salazar-Sánchez, Lizbeth

2014-11-01

HLA-B(∗)57:01 is a well-known and cost-effective pharmacogenetic marker for abacavir hypersensitivity. As with other HLA alleles, there is widespread variation in its frequency across populations. The Costa Rica Central Valley Population (CCVP) is the major population in this country. The frequency of HLA-B(∗)57:01 in this population has not been described yet. Thus, our aim was to determine the frequency of this allele in the CCVP. 200 unrelated healthy volunteer donors born in the CCVP were typed. HLA-B(∗)57-positive samples identified by HLA intermediate resolution typing methods were further typed by SBT to high resolution. An HLA-B(∗)57:01 carrier frequency of 5.00% was determined in this sample. This frequency is relatively high in comparison to reports from other populations in Latin America. These results suggest that there is a considerable frequency of HLA-B(∗)57:01 in the CCVP and that pharmacogenetic testing for HIV+ patients who are going to receive abacavir-based treatment should be considered in this country. Copyright © 2014 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.

Investigation of high sensitivity radio-frequency readout circuit based on AlGaN/GaN high electron mobility transistor

NASA Astrophysics Data System (ADS)

Zhang, Xiao-Yu; Tan, Ren-Bing; Sun, Jian-Dong; Li, Xin-Xing; Zhou, Yu; Lü, Li; Qin, Hua

2015-10-01

An AlGaN/GaN high electron mobility transistor (HEMT) device is prepared by using a semiconductor nanofabrication process. A reflective radio-frequency (RF) readout circuit is designed and the HEMT device is assembled in an RF circuit through a coplanar waveguide transmission line. A gate capacitor of the HEMT and a surface-mounted inductor on the transmission line are formed to generate LC resonance. By tuning the gate voltage Vg, the variations of gate capacitance and conductance of the HEMT are reflected sensitively from the resonance frequency and the magnitude of the RF reflection signal. The aim of the designed RF readout setup is to develop a highly sensitive HEMT-based detector. Project supported by the National Natural Science Foundation of China (Grant No. 61107093), the Suzhou Science and Technology Project, China (Grant No. ZXG2012024), and the Youth Innovation Promotion Association, Chinese Academy of Sciences (Grant No. 2012243).

Load variation effects on the pressure fluctuations exerted on a Kaplan turbine runner

NASA Astrophysics Data System (ADS)

Amiri, K.; Mulu, B.; Raisee, M.; Cervantes, M. J.

2014-03-01

Introduction of intermittent electricity production systems like wind power and solar systems to electricity market together with the consumption-based electricity production resulted in numerous start/stops, load variations and off-design operation of water turbines. The hydropower systems suffer from the varying loads exerted on the stationary and rotating parts of the turbines during load variations which they are not designed for. On the other hand, investigations on part load operation of single regulated turbines, i.e., Francis and propeller, proved the formation of rotating vortex rope (RVR) in the draft tube. The RVR induces oscillating flow both in plunging and rotating modes which results in oscillating force with two different frequencies on the runner blades, bearings and other rotating parts of the turbine. The purpose of this study is to investigate the effect of transient operations on the pressure fluctuations on the runner and mechanism of the RVR formation/mitigation. Draft tube and runner blades of the Porjus U9 model, a Kaplan turbine, were equipped with pressure sensors. The model was run in off-cam mode during different load variation conditions to check the runner performance under unsteady condition. The results showed that the transients between the best efficiency point and the high load happens in a smooth way while transitions to/from the part load, where rotating vortex rope (RVR) forms in the draft tube induces high level of fluctuations with two frequencies on the runner; plunging and rotating mode of the RVR.

Genetic diversity and structure of Lolium perenne ssp. multiflorum in California vineyards and orchards indicate potential for spread of herbicide resistance via gene flow.

PubMed

Karn, Elizabeth; Jasieniuk, Marie

2017-07-01

Management of agroecosystems with herbicides imposes strong selection pressures on weedy plants leading to the evolution of resistance against those herbicides. Resistance to glyphosate in populations of Lolium perenne L. ssp. multiflorum is increasingly common in California, USA, causing economic losses and the loss of effective management tools. To gain insights into the recent evolution of glyphosate resistance in L. perenne in perennial cropping systems of northwest California and to inform management, we investigated the frequency of glyphosate resistance and the genetic diversity and structure of 14 populations. The sampled populations contained frequencies of resistant plants ranging from 10% to 89%. Analyses of neutral genetic variation using microsatellite markers indicated very high genetic diversity within all populations regardless of resistance frequency. Genetic variation was distributed predominantly among individuals within populations rather than among populations or sampled counties, as would be expected for a wide-ranging outcrossing weed species. Bayesian clustering analysis provided evidence of population structuring with extensive admixture between two genetic clusters or gene pools. High genetic diversity and admixture, and low differentiation between populations, strongly suggest the potential for spread of resistance through gene flow and the need for management that limits seed and pollen dispersal in L. perenne .

Population structure of the giant garter snake, Thamnophis gigas

USGS Publications Warehouse

Paquin, M.M.; Wylie, G.D.; Routman, E.J.

2006-01-01

The giant garter snake, Thamnophis gigas, is a threatened species endemic to California's Central Valley. We tested the hypothesis that current watershed boundaries have caused genetic differentiation among populations of T. gigas. We sampled 14 populations throughout the current geographic range of T. gigas and amplified 859 bp from the mitochondrial gene ND4 and one nuclear microsatellite locus. DNA sequence variation from the mitochondrial gene indicates there is some genetic structuring of the populations, with high F ST values and unique haplotypes occurring at high frequency in several populations. We found that clustering populations by watershed boundary results in significant between-region genetic variance for mtDNA. However, analysis of allele frequencies at the microsatellite locus NSU3 reveals very low F ST values and little between-region variation in allele frequencies. The discordance found between mitochondrial and microsatellite data may be explained by aspects of molecular evolution and/or T. gigas life history characteristics. Differences in effective population size between mitochondrial and nuclear DNA, or male-biased gene flow, result in a lower migration rate of mitochondrial haplotypes relative to nuclear alleles. However, we cannot exclude homoplasy as one explanation for homogeneity found for the single microsatellite locus. The mitochondrial nucleotide sequence data supports conservation practices that identify separate management units for T. gigas. ?? Springer 2006.

Face Recognition Is Affected by Similarity in Spatial Frequency Range to a Greater Degree Than Within-Category Object Recognition

ERIC Educational Resources Information Center

Collin, Charles A.; Liu, Chang Hong; Troje, Nikolaus F.; McMullen, Patricia A.; Chaudhuri, Avi

2004-01-01

Previous studies have suggested that face identification is more sensitive to variations in spatial frequency content than object recognition, but none have compared how sensitive the 2 processes are to variations in spatial frequency overlap (SFO). The authors tested face and object matching accuracy under varying SFO conditions. Their results…

Time Periods of Unusual Density Behavior Observed by GRACE and CHAMP

NASA Astrophysics Data System (ADS)

McLaughlin, C. A.; Fattig, E.; Mysore Krishna, D.; Locke, T.; Mehta, P. M.

2011-12-01

Time periods of low cross correlation between precision orbit ephemeris (POE) derived density and accelerometer density for CHAMP and GRACE are examined. In particular, the cross correlation for GRACE dropped from typical values near 0.9 to much lower values and then returned to typical over the time period of late October to late December of 2005. This time period includes a maneuver where GRACE-A and GRACE-B swapped positions. However, the drop in cross correlation begins and reaches its low point before the maneuvers begin. In addition, the densities were found using GRACE-A, but GRACE-B did most of the maneuvering. The time period is characterized by high frequency variations in accelerometer density of the same magnitude as the daylight to eclipse variations over the course of an orbit. However, the daylight to eclipse variations are particularly small during this time period because the orbit plane is near the terminator. Additionally, the difference between the accelerometer and POE derived densities are not unusually large during this time period. This implies the variations are not unusual, just more significant when the orbit plane is near terminator. Cyclical variations in correlation of the POE derived densities with accelerometer derived densities are seen for both GRACE and CHAMP, but the magnitude of the variations are much larger for GRACE, possibly because of the higher altitude of GRACE. The cycles seem to be phased so that low correlations occur with low beta angle when the orbit plane is near the terminator. The low correlation is possibly caused by the lower amplitude of the daylight to eclipse signal making higher frequency variations relatively more important. However, another possible explanation is terminator waves in density that propagate to the thermosphere from lower in the atmosphere. These waves have been observed in CHAMP accelerometer data and global circulation model simulations. Further investigation is needed to see if the variations correspond to terminator waves or if they represent typical high frequency signal from another source that is more apparent when the orbit plane is near the terminator. 1. C. A. McLaughlin, E. Fattig, D. Mysore Krishna, and P. M. Mehta, "Time Periods of Anomalous Density for GRACE and CHAMP," AAS/AIAA Astrodynamics Specialists Conference, AAS 11-613, Girdwood, AK, August 2011. 2. C. A. McLaughlin, A. Hiatt, and T. Lechtenberg, "Calibrating Precision Orbit Derived Total Density," Journal of Spacecraft and Rockets, Vol. 48, No. 1, January-February 2011, pp. 166-174.

Distribution of rain height over subtropical region: Durban, South Africa for satellite communication systems

NASA Astrophysics Data System (ADS)

Olurotimi, E. O.; Sokoya, O.; Ojo, J. S.; Owolawi, P. A.

2018-03-01

Rain height is one of the significant parameters for prediction of rain attenuation for Earth-space telecommunication links, especially those operating at frequencies above 10 GHz. This study examines Three-parameter Dagum distribution of the rain height over Durban, South Africa. 5-year data were used to study the monthly, seasonal, and annual variations using the parameters estimated by the maximum likelihood of the distribution. The performance estimation of the distribution was determined using the statistical goodness of fit. Three-parameter Dagum distribution shows an appropriate distribution for the modeling of rain height over Durban with the Root Mean Square Error of 0.26. Also, the shape and scale parameters for the distribution show a wide variation. The probability exceedance of time for 0.01% indicates the high probability of rain attenuation at higher frequencies.

Migraine disability assessment (MIDAS) score: relation to headache frequency, pain intensity, and headache symptoms.

PubMed

Stewart, Walter F; Lipton, Richard B; Kolodner, Ken

2003-03-01

To determine the extent to which variation in the Migraine Disability Assessment (MIDAS) score is associated with headache frequency, pain intensity, headache symptoms, gender, and employment status. The MIDAS questionnaire is a 7-item questionnaire (with 5 scored items) designed to measure headache-related disability, to improve physician-patient communication, and to identify patients with high treatment needs. Data from 3 population-based studies (total sample, n = 397) conducted in the United States and the United Kingdom were used to evaluate the relationship between headache features (attack frequency, pain intensity, pain quality, and associated symptoms) and MIDAS score. Data on headache features were collected by telephone using a standardized interview. The MIDAS questionnaire was completed shortly after the telephone interview. General linear models were used to determine the extent to which population variation in the MIDAS score was explained by headache features. Using linear regression, variables for all headache features (ie, headache frequency, pain intensity, pain quality, and associated symptoms) and demographic characteristics explained only 22% of the variation in MIDAS scores. Almost all (19.9%) the explained variance was accounted for by average pain intensity (12.0%), number of headache days (6.1%), and exacerbation of pain with movement (1.8%). When pain intensity and headache frequency were included in the model, no statistically significant differences in MIDAS scores were observed by gender or employment status. Although explaining only 2.1% of the variance, age was significantly associated with MIDAS scores, with those under 25 years demonstrating higher MIDAS scores than other age groups. No other variables (ie, frequency of occurrence of associated symptoms and other measures of quality of pain) were associated with MIDAS scores. Challenges to the utility of the MIDAS as a measure include whether headache-related disability is largely a function of other routine headache features and whether MIDAS is inherently biased based on work status and gender. While the MIDAS score was associated with headache frequency and average pain score, these two headache features explain only a modest proportion of the variation in MIDAS scores. Additionally, gender and work status were not related to MIDAS scores. These findings suggest that the MIDAS score captures information about disability that is not inherent to other headache features and is independent of gender and work status.

Compact, Energy-Efficient High-Frequency Switched Capacitor Neural Stimulator With Active Charge Balancing.

PubMed

Hsu, Wen-Yang; Schmid, Alexandre

2017-08-01

Safety and energy efficiency are two major concerns for implantable neural stimulators. This paper presents a novel high-frequency, switched capacitor (HFSC) stimulation and active charge balancing scheme, which achieves high energy efficiency and well-controlled stimulation charge in the presence of large electrode impedance variations. Furthermore, the HFSC can be implemented in a compact size without any external component to simultaneously enable multichannel stimulation by deploying multiple stimulators. The theoretical analysis shows significant benefits over the constant-current and voltage-mode stimulation methods. The proposed solution was fabricated using a 0.18 μm high-voltage technology, and occupies only 0.035 mm 2 for a single stimulator. The measurement result shows 50% peak energy efficiency and confirms the effectiveness of active charge balancing to prevent the electrode dissolution.

Testing the Sensory Drive Hypothesis: Geographic variation in echolocation frequencies of Geoffroy's horseshoe bat (Rhinolophidae: Rhinolophus clivosus)

PubMed Central

Catto, Sarah; Mutumi, Gregory L.; Finger, Nikita; Webala, Paul W.

2017-01-01

Geographic variation in sensory traits is usually influenced by adaptive processes because these traits are involved in crucial life-history aspects including orientation, communication, lineage recognition and mate choice. Studying this variation can therefore provide insights into lineage diversification. According to the Sensory Drive Hypothesis, lineage diversification may be driven by adaptation of sensory systems to local environments. It predicts that acoustic signals vary in association with local climatic conditions so that atmospheric attenuation is minimized and transmission of the signals maximized. To test this prediction, we investigated the influence of climatic factors (specifically relative humidity and temperature) on geographic variation in the resting frequencies of the echolocation pulses of Geoffroy’s horseshoe bat, Rhinolophus clivosus. If the evolution of phenotypic variation in this lineage tracks climate variation, human induced climate change may lead to decreases in detection volumes and a reduction in foraging efficiency. A complex non-linear interaction between relative humidity and temperature affects atmospheric attenuation of sound and principal components composed of these correlated variables were, therefore, used in a linear mixed effects model to assess their contribution to observed variation in resting frequencies. A principal component composed predominantly of mean annual temperature (factor loading of -0.8455) significantly explained a proportion of the variation in resting frequency across sites (P < 0.05). Specifically, at higher relative humidity (around 60%) prevalent across the distribution of R. clivosus, increasing temperature had a strong negative effect on resting frequency. Climatic factors thus strongly influence acoustic signal divergence in this lineage, supporting the prediction of the Sensory Drive Hypothesis. The predicted future increase in temperature due to climate change is likely to decrease the detection volume in echolocating bats and adversely impact their foraging efficiency. PMID:29186147

Testing the Sensory Drive Hypothesis: Geographic variation in echolocation frequencies of Geoffroy's horseshoe bat (Rhinolophidae: Rhinolophus clivosus).

PubMed

Jacobs, David S; Catto, Sarah; Mutumi, Gregory L; Finger, Nikita; Webala, Paul W

2017-01-01

Geographic variation in sensory traits is usually influenced by adaptive processes because these traits are involved in crucial life-history aspects including orientation, communication, lineage recognition and mate choice. Studying this variation can therefore provide insights into lineage diversification. According to the Sensory Drive Hypothesis, lineage diversification may be driven by adaptation of sensory systems to local environments. It predicts that acoustic signals vary in association with local climatic conditions so that atmospheric attenuation is minimized and transmission of the signals maximized. To test this prediction, we investigated the influence of climatic factors (specifically relative humidity and temperature) on geographic variation in the resting frequencies of the echolocation pulses of Geoffroy's horseshoe bat, Rhinolophus clivosus. If the evolution of phenotypic variation in this lineage tracks climate variation, human induced climate change may lead to decreases in detection volumes and a reduction in foraging efficiency. A complex non-linear interaction between relative humidity and temperature affects atmospheric attenuation of sound and principal components composed of these correlated variables were, therefore, used in a linear mixed effects model to assess their contribution to observed variation in resting frequencies. A principal component composed predominantly of mean annual temperature (factor loading of -0.8455) significantly explained a proportion of the variation in resting frequency across sites (P < 0.05). Specifically, at higher relative humidity (around 60%) prevalent across the distribution of R. clivosus, increasing temperature had a strong negative effect on resting frequency. Climatic factors thus strongly influence acoustic signal divergence in this lineage, supporting the prediction of the Sensory Drive Hypothesis. The predicted future increase in temperature due to climate change is likely to decrease the detection volume in echolocating bats and adversely impact their foraging efficiency.

Decadal-scale variation in dune erosion and accretion rates: An investigation of the significance of changing storm tide frequency and magnitude on the Sefton coast, UK

NASA Astrophysics Data System (ADS)

Pye, K.; Blott, S. J.

2008-12-01

Monitoring of frontal dune erosion and accretion on the Sefton coast in northwest England over the past 50 years has revealed significant spatial and temporal variations. Previous work has shown that the spatial variations primarily reflect longshore differences in beach and nearshore morphology, energy regime and sediment budget, but the causes of temporal variations have not previously been studied in detail. This paper presents the results of work carried out to test the hypothesis that a major cause of temporal variation is changes in the frequency and magnitude of storms, surges and resulting high tides. Dune toe erosion/accretion records dating from 1958 have been compared with tide gauge records at Liverpool and Heysham. Relatively high dune erosion rates at Formby Point 1958-1968 were associated with a relatively large number of storm tides. Slower erosion at Formby, and relatively rapid accretion in areas to the north and south, occurred during the 1970's and 1980's when there were relatively few major storm tides. After 1990 rates of dune erosion at Formby increased again, and dunes to the north and south experienced slower accretion. During this period high storm tides have been more frequent, and the annual number of hours with water levels above the critical level for dune erosion has increased significantly. An increase in the rate of mean sea-level rise at both Liverpool and Heysham is evident since 1990, but we conclude that this factor is of less importance than the occurrence of extreme high tides and wave action associated with storms. The incidence of extreme high tides shows an identifiable relationship with the lunar nodal tidal cycle, but the evidence indicates that meteorological forcing has also had a significant effect. Storms and surges in the eastern Irish Sea are associated with Atlantic depressions whose direction and rate of movement have a strong influence on wind speeds, wave energy and the height of surge tides. However, preliminary analysis has indicated only a modest relationship between dune erosion/accretion rates and the North Atlantic Oscillation index.

Improved Filon-type asymptotic methods for highly oscillatory differential equations with multiple time scales

NASA Astrophysics Data System (ADS)

Wang, Bin; Wu, Xinyuan

2014-11-01

In this paper we consider multi-frequency highly oscillatory second-order differential equations x″ (t) + Mx (t) = f (t , x (t) ,x‧ (t)) where high-frequency oscillations are generated by the linear part Mx (t), and M is positive semi-definite (not necessarily nonsingular). It is known that Filon-type methods are effective approach to numerically solving highly oscillatory problems. Unfortunately, however, existing Filon-type asymptotic methods fail to apply to the highly oscillatory second-order differential equations when M is singular. We study and propose an efficient improvement on the existing Filon-type asymptotic methods, so that the improved Filon-type asymptotic methods can be able to numerically solving this class of multi-frequency highly oscillatory systems with a singular matrix M. The improved Filon-type asymptotic methods are designed by combining Filon-type methods with the asymptotic methods based on the variation-of-constants formula. We also present one efficient and practical improved Filon-type asymptotic method which can be performed at lower cost. Accompanying numerical results show the remarkable efficiency.

Evidence of Resonant Mode Coupling and the Relationship between Low and High Frequencies in a Rapidly Rotating a Star

NASA Astrophysics Data System (ADS)

Breger, M.; Montgomery, M. H.

2014-03-01

In the theory of resonant mode coupling, the parent and child modes are directly related in frequency and phase. The oscillations present in the fast rotating δ Sct star KIC 8054146 allow us to test the most general and generic aspects of such a theory. The only direct way to separate the parent and coupled (child) modes is to examine the correlations in amplitude variability between the different frequencies. For the dominant family of related frequencies, only a single mode and a triplet are the origins of nine dominant frequency peaks ranging from 2.93 to 66.30 cycles day-1 (as well as dozens of small-amplitude combination modes and a predicted and detected third high-frequency triplet). The mode-coupling model correctly predicts the large amplitude variations of the coupled modes as a product of the amplitudes of the parent modes, while the phase changes are also correctly modeled. This differs from the behavior of "normal" combination frequencies in that the amplitudes are three orders of magnitude larger and may exceed even the amplitudes of the parent modes. We show that two dominant low frequencies at 5.86 and 2.93 cycles day-1 in the gravity-mode region are not harmonics of each other, and their properties follow those of the almost equidistant high-frequency triplet. We note that the previously puzzling situation of finding two strong peaks in the low-frequency region related by nearly a factor of two in frequency has been seen in other δ Sct stars as well.

High-frequency guided ultrasonic waves for hidden defect detection in multi-layered aircraft structures.

PubMed

Masserey, Bernard; Raemy, Christian; Fromme, Paul

2014-09-01

Aerospace structures often contain multi-layered metallic components where hidden defects such as fatigue cracks and localized disbonds can develop, necessitating non-destructive testing. Employing standard wedge transducers, high frequency guided ultrasonic waves that penetrate through the complete thickness were generated in a model structure consisting of two adhesively bonded aluminium plates. Interference occurs between the wave modes during propagation along the structure, resulting in a frequency dependent variation of the energy through the thickness with distance. The wave propagation along the specimen was measured experimentally using a laser interferometer. Good agreement with theoretical predictions and two-dimensional finite element simulations was found. Significant propagation distance with a strong, non-dispersive main wave pulse was achieved. The interaction of the high frequency guided ultrasonic waves with small notches in the aluminium layer facing the sealant and on the bottom surface of the multilayer structure was investigated. Standard pulse-echo measurements were conducted to verify the detection sensitivity and the influence of the stand-off distance predicted from the finite element simulations. The results demonstrated the potential of high frequency guided waves for hidden defect detection at critical and difficult to access locations in aerospace structures from a stand-off distance. Copyright © 2014 The Authors. Published by Elsevier B.V. All rights reserved.

The dielectric properties of soil-water mixtures at microwave frequencies

NASA Technical Reports Server (NTRS)

Wang, J. R.

1979-01-01

Recent measurements on the dielectric constants of soil-water mixtures show the existence of two frequency regions in which the dielectric behavior of these mixtures was quite different. At the frequencies of 1.4 GHz to 5 GHz, there were strong evidences that the variations of the dielectric (epsilon) with water content (W) depended on soil type. While the real part of epsilon for sandy soils rose rapidly with the increase in W, epsilon for the high-clay content soils rose only slowly with W. As a consequence, epsilon was generally higher for the sandy soils than for the high-clay content soils at a given W. On the other hand, most of the measurements at frequencies 1 GHz indicated the increase of epsilon with W independent of soil types. At a given W, epsilon' (sandy soil) approximately equals epsilon (high-clay content soil) within the precision of the measurements. These observational features can be satisfactorily interpreted in terms of a simple dielectric relaxation model, with an appropriate choice of the mean relaxation frequency f(m) and the range of the activation energy (beta). It was found that smaller f(m) and larger beta were required for the high-clay content soils than the sandy soils in order to be consistent with the measured data.

Power system frequency estimation based on an orthogonal decomposition method

NASA Astrophysics Data System (ADS)

Lee, Chih-Hung; Tsai, Men-Shen

2018-06-01

In recent years, several frequency estimation techniques have been proposed by which to estimate the frequency variations in power systems. In order to properly identify power quality issues under asynchronously-sampled signals that are contaminated with noise, flicker, and harmonic and inter-harmonic components, a good frequency estimator that is able to estimate the frequency as well as the rate of frequency changes precisely is needed. However, accurately estimating the fundamental frequency becomes a very difficult task without a priori information about the sampling frequency. In this paper, a better frequency evaluation scheme for power systems is proposed. This method employs a reconstruction technique in combination with orthogonal filters, which may maintain the required frequency characteristics of the orthogonal filters and improve the overall efficiency of power system monitoring through two-stage sliding discrete Fourier transforms. The results showed that this method can accurately estimate the power system frequency under different conditions, including asynchronously sampled signals contaminated by noise, flicker, and harmonic and inter-harmonic components. The proposed approach also provides high computational efficiency.

SENSITIVITY OF CONDITIONAL-DISCRIMINATION PERFORMANCE TO WITHIN-SESSION VARIATION OF REINFORCER FREQUENCY

PubMed Central

Ward, Ryan D; Odum, Amy L

2008-01-01

The present experiment developed a methodology for assessing sensitivity of conditional-discrimination performance to within-session variation of reinforcer frequency. Four pigeons responded under a multiple schedule of matching-to-sample components in which the ratio of reinforcers for correct S1 and S2 responses was varied across components within session. Initially, five components, each arranging a different reinforcer-frequency ratio (from 1∶9 to 9∶1), were presented randomly within a session. Under this condition, sensitivity to reinforcer frequency was low. Sensitivity failed to improve after extended exposure to this condition, and under a condition in which only three reinforcer-frequency ratios were varied within session. In a later condition, three reinforcer-frequency ratios were varied within session, but the reinforcer-frequency ratio in effect was differentially signaled within each component. Under this condition, values of sensitivity were similar to those traditionally obtained when reinforcer-frequency ratios for correct responses are varied across conditions. The effects of signaled vs. unsignaled reinforcer-frequency ratios were replicated in two subsequent conditions. The present procedure could provide a practical alternative to parametric variation of reinforcer frequency across conditions and may be useful in characterizing the effects of a variety of manipulations on steady-state sensitivity to reinforcer frequency. PMID:19070338

Operation of the CAPRICE electron cyclotron resonance ion source applying frequency tuning and double frequency heating.

PubMed

Maimone, F; Tinschert, K; Celona, L; Lang, R; Mäder, J; Rossbach, J; Spädtke, P

2012-02-01

The properties of the electromagnetic waves heating the electrons of the ECR ion sources (ECRIS) plasma affect the features of the extracted ion beams such as the emittance, the shape, and the current, in particular for higher charge states. The electron heating methods such as the frequency tuning effect and the double frequency heating are widely used for enhancing the performances of ECRIS or even for the routine operation during the beam production. In order to better investigate these effects the CAPRICE ECRIS has been operated using these techniques. The ion beam properties for highly charged ions have been measured with beam diagnostic tools. The reason of the observed variations of this performance can be related to the different electromagnetic field patterns, which are changing inside the plasma chamber when the frequency is varying.

Hydroclimate variations in central and monsoonal Asia over the past 700 years.

PubMed

Fang, Keyan; Chen, Fahu; Sen, Asok K; Davi, Nicole; Huang, Wei; Li, Jinbao; Seppä, Heikki

2014-01-01

Hydroclimate variations since 1300 in central and monsoonal Asia and their interplay on interannual and interdecadal timescales are investigated using the tree-ring based Palmer Drought Severity Index (PDSI) reconstructions. Both the interannual and interdecadal variations in both regions are closely to the Pacific Decadal Oscillation (PDO). On interannual timescale, the most robust correlations are observed between PDO and hydroclimate in central Asia. Interannual hydroclimate variations in central Asia are more significant during the warm periods with high solar irradiance, which is likely due to the enhanced variability of the eastern tropical Pacific Ocean, the high-frequency component of PDO, during the warm periods. We observe that the periods with significant interdecadal hydroclimate changes in central Asia often correspond to periods without significant interdecadal variability in monsoonal Asia, particularly before the 19th century. The PDO-hydroclimate relationships appear to be bridged by the atmospheric circulation between central North Pacific Ocean and Tibetan Plateau, a key area of PDO. While, in some periods the atmospheric circulation between central North Pacific Ocean and monsoonal Asia may lead to significant interdecadal hydroclimate variations in monsoonal Asia.

Hydroclimate Variations in Central and Monsoonal Asia over the Past 700 Years

PubMed Central

Fang, Keyan; Chen, Fahu; Sen, Asok K.; Davi, Nicole; Huang, Wei; Li, Jinbao; Seppä, Heikki

2014-01-01

Hydroclimate variations since 1300 in central and monsoonal Asia and their interplay on interannual and interdecadal timescales are investigated using the tree-ring based Palmer Drought Severity Index (PDSI) reconstructions. Both the interannual and interdecadal variations in both regions are closely to the Pacific Decadal Oscillation (PDO). On interannual timescale, the most robust correlations are observed between PDO and hydroclimate in central Asia. Interannual hydroclimate variations in central Asia are more significant during the warm periods with high solar irradiance, which is likely due to the enhanced variability of the eastern tropical Pacific Ocean, the high-frequency component of PDO, during the warm periods. We observe that the periods with significant interdecadal hydroclimate changes in central Asia often correspond to periods without significant interdecadal variability in monsoonal Asia, particularly before the 19th century. The PDO-hydroclimate relationships appear to be bridged by the atmospheric circulation between central North Pacific Ocean and Tibetan Plateau, a key area of PDO. While, in some periods the atmospheric circulation between central North Pacific Ocean and monsoonal Asia may lead to significant interdecadal hydroclimate variations in monsoonal Asia. PMID:25119567

Impact of respiratory-correlated CT sorting algorithms on the choice of margin definition for free-breathing lung radiotherapy treatments.

PubMed

Thengumpallil, Sheeba; Germond, Jean-François; Bourhis, Jean; Bochud, François; Moeckli, Raphaël

2016-06-01

To investigate the impact of Toshiba phase- and amplitude-sorting algorithms on the margin strategies for free-breathing lung radiotherapy treatments in the presence of breathing variations. 4D CT of a sphere inside a dynamic thorax phantom was acquired. The 4D CT was reconstructed according to the phase- and amplitude-sorting algorithms. The phantom was moved by reproducing amplitude, frequency, and a mix of amplitude and frequency variations. Artefact analysis was performed for Mid-Ventilation and ITV-based strategies on the images reconstructed by phase- and amplitude-sorting algorithms. The target volume deviation was assessed by comparing the target volume acquired during irregular motion to the volume acquired during regular motion. The amplitude-sorting algorithm shows reduced artefacts for only amplitude variations while the phase-sorting algorithm for only frequency variations. For amplitude and frequency variations, both algorithms perform similarly. Most of the artefacts are blurring and incomplete structures. We found larger artefacts and volume differences for the Mid-Ventilation with respect to the ITV strategy, resulting in a higher relative difference of the surface distortion value which ranges between maximum 14.6% and minimum 4.1%. The amplitude- is superior to the phase-sorting algorithm in the reduction of motion artefacts for amplitude variations while phase-sorting for frequency variations. A proper choice of 4D CT sorting algorithm is important in order to reduce motion artefacts, especially if Mid-Ventilation strategy is used. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

On the density of the corona in regions of type 3 activity

NASA Technical Reports Server (NTRS)

Kuiper, T. B. H.

1973-01-01

The east-west positions of 190 type 3 bursts were measured between 30 and 65 MHz with the log-periodic array at Clark Lake. A method is described to find the intrinsic variation of position with frequency of type 3 bursts based on the comparison of the positions of the bursts measured at any two arbitrary frequencies. It is found that the variation of position frequency agrees with the behaviour expected from coronal density models. This suggests that the measured positions were not seriously affected by scattering in the corona. Knowing the functional form of the variation of position with frequency for type 3 bursts, it is shown that the observed burst positions can be corrected for the effects of ionospheric refraction.

Built-in self-test (BIST) techniques for millimeter wave CMOS transceivers

NASA Astrophysics Data System (ADS)

Mahzabeen, Tabassum

The seamless integration of complementary metal oxide semiconductor (CMOS) transceivers with a digital CMOS process enhances on-chip testability, thus reducing production and testing costs. Built in self testability also improves yield by offering on-chip compensation. This work focuses on built in self test techniques for CMOS based millimeter wave (mm-wave) transceivers. Built-in-self-test (BIST) using the loopback method is one cost-effective method for testing these transceivers. Since the loopback switch is always present during the normal operation of the transceiver, the requirement of the switch is different than for a conventional switch. The switch needs to have high isolation and high impedance during its OFF period. Two 80 GHz single pole single throw (SPST) switches have been designed, fabricated in standard CMOS process, and measured to connect the loopback path for BIST applications. The loopback switches in this work provide the required criteria for loopback BIST. A stand alone 80 GHz low noise amplifier (LNA) and the same LNA integrated with one of the loopback switches have been fabricated, and measured to observe the difference in performance when the loopback switch is present. Besides the loopback switch, substrate leakage also forms a path between the transmitter and receiver. Substrate leakage has been characterized as a function of distance between the transmitter and receiver for consideration in using the BIST method. A BIST algorithm has been developed to estimate the process variation in device sizes by probing a low frequency ring oscillator to estimate the device variation and map this variation to the 80 GHz LNA. Probing a low frequency circuit is cheaper compared to the probing of a millimeter wave circuit and reduces the testing costs. The performance of the LNA degrades due to variation in device size. Once the shift in the device size is being estimated (from the ring oscillator's shifted frequency), the LNA's performance can be recovered using several methods; for example, using tunable transmission line lengths in the amplifier or using a variable supply voltage. This concept of estimating process variation has been demonstrated in Agilent Design System (ADS).

Great Genotypic and Phenotypic Diversities Associated with Copy-Number Variations of Complement C4 and RP-C4-CYP21-TNX (RCCX) Modules: a Comparison of Asian Indian and European American Populations

PubMed Central

Saxena, Kapil; Kitzmiller, Kathryn J.; Wu, Yee Ling; Zhou, Bi; Esack, Nazreen; Hiremath, Leena; Chung, Erwin K.; Yang, Yan; Yu, C. Yung

2009-01-01

Inter-individual gene copy-number variations (CNVs) probably afford human populations the flexibility to respond to a variety of environmental challenges, but also lead to differential disease predispositions. We investigated gene CNVs for complement component C4 and steroid 21-hydroxylase from the RP-C4-CYP21-TNX (RCCX) modules located in the major histocompatibility complex among healthy Asian-Indian Americans (AIA) and compared them to European Americans. A combination of definitive techniques that yielded cross-confirmatory results was used. The medium gene copy-numbers for C4 and its isotypes, acidic C4A and basic C4B, were 4, 2 and 2, respectively, but their frequencies were only 53–56%. The distribution patterns for total C4 and C4A are skewed towards the high copy-number side. For example, the frequency of AIA-subjects with three copies of C4A (30.7%) was 3.92-fold of those with a single copy (7.83%). The monomodular-short haplotype with a single C4B gene and the absence of C4A, which is in linkage- disequilibrium with HLA DRB1*0301 in Europeans and a strong risk factor for autoimmune diseases, has a frequency of 0.012 in AIA but 0.106 among healthy European Americans (p=6.6×10−8). The copy-number and the size of C4 genes strongly determine the plasma C4 protein concentrations. Parallel variations in copy-numbers of CYP21A (CYP21A1P) and TNXA with total C4 were also observed. Notably, 13.1% of AIA-subjects had three copies of the functional CYP21B, which were likely generated by recombinations between monomodular and bimodular RCCX haplotypes. The high copy-numbers of C4 and the high frequency of RCCX recombinants offer important insights to the prevalence of autoimmune and genetic diseases. PMID:19135723

Source Parameters and High Frequency Characteristics of Local Events (0.5 ≤ M L ≤ 2.9) Around Bilaspur Region of the Himachal Himalaya

NASA Astrophysics Data System (ADS)

Vandana; Kumar, Ashwani; Gupta, S. C.; Mishra, O. P.; Kumar, Arjun; Sandeep

2017-04-01

Source parameters of 41 local events (0.5 ≤ M L ≤ 2.9) occurred around Bilaspur region of the Himachal Lesser Himalaya from May 2013 to March 2014 have been estimated adopting Brune model. The estimated source parameters include seismic moments ( M o), source radii ( r), and stress drops (Δ σ), and found to vary from 4.9 × 1019 to 7 × 1021 dyne-cm, about 187-518 m and less than 1 bar to 51 bars, respectively. The decay of high frequency acceleration spectra at frequencies above f max has been modelled using two functions: a high-cut filter and κ factor. Stress drops of 11 events, with M 0 between 1 × 1021 and 7 × 1021 dyne-cm, vary from 11 bars to 51 bars with an average of 22 bars. From the variation of the maximum stress drop with focal depth it appears that the strength of the upper crust decreases below 20 km. A scaling law M 0 = 2 × 1022 f c -3.03 between M 0, and corner frequency (f c), has been developed for the region. This law almost agrees with that for the Kameng region of the Arunachal Lesser Himalaya. f c is found to be source dependent whereas f max is source independent and seems to indicate that the size of the cohesive zone is not sensitive to the earthquake size. At four sites f max is found to vary from 14 to 23, 11 to 19, 9 to 23 and 4 to 11 Hz, respectively. The κ is found to vary from 0.01 to 0.035 s with an average of 0.02 s. This range of variation is a large compared to the κ variation between 0.023 and 0.07 s for the Garhwal and Kumaon Himalaya. For various regions of the world, the κ varies over a broad range from 0.003 to 0.08 s, and for the Bilaspur region the κ estimates are found to be consistent with other regions of the world.

Hyporheic Zone Residence Time Distributions in Regulated River Corridors

NASA Astrophysics Data System (ADS)

Song, X.; Chen, X.; Shuai, P.; Gomez-Velez, J. D.; Ren, H.; Hammond, G. E.

2017-12-01

Regulated rivers exhibit stage fluctuations at multiple frequencies due to both natural processes (e.g., seasonal cycle) and anthropogenic activities (e.g., dam operation). The interaction between the dynamic river flow conditions and the heterogeneous aquifer properties results in complex hydrologic exchange pathways that are ubiquitous in free-flowing and regulated river corridors. The dynamic nature of the exchange flow is reflected in the residence time distribution (RTD) of river water within the groundwater system, which is a key metric that links river corridor biogeochemical processes with the hydrologic exchange. Understanding the dynamics of RTDs is critical to gain the mechanistic understanding of hydrologic exchange fluxes and propose new parsimonious models for river corridors, yet it is understudied primarily due to the high computational demands. In this study, we developed parallel particle tracking algorithms to reveal how river flow variations affect the RTD of river water in the alluvial aquifer. Particle tracking was conducted using the velocity outputs generated by three-dimensional groundwater flow simulations of PFLOTRAN in a 1600 x 800 x 20m model domain within the DOE Hanford Site. Long-term monitoring data of inland well water levels and river stage were used for eight years of flow simulation. Nearly a half million particles were continually released along the river boundary to calculate the RTDs. Spectral analysis of the river stage data revealed high-frequency (sub-daily to weekly) river stage fluctuations caused by dam operations. The higher frequencies of stage variation were progressively filtered to generate multiple sets of flow boundary conditions. A series of flow simulations were performed by using the filtered flow boundary conditions and various degrees of subsurface heterogeneity to study the relative contribution of flow dynamics and physical heterogeneity on river water RTD. Our results revealed multimodal RTDs of river water as a result of the highly variable exchange pathways driven by interactions between dynamic flow and aquifer heterogeneity. A relationship between the RTD and frequency of flow variation was built for each heterogeneity structure, which can be used to assess the potential ecological consequences of dam operations in regulated rivers.

Time-Lapse Acoustic Impedance Inversion in CO2 Sequestration Study (Weyburn Field, Canada)

NASA Astrophysics Data System (ADS)

Wang, Y.; Morozov, I. B.

2016-12-01

Acoustic-impedance (AI) pseudo-logs are useful for characterising subtle variations of fluid content during seismic monitoring of reservoirs undergoing enhanced oil recovery and/or geologic CO2 sequestration. However, highly accurate AI images are required for time-lapse analysis, which may be difficult to achieve with conventional inversion approaches. In this study, two enhancements of time-lapse AI analysis are proposed. First, a well-known uncertainty of AI inversion is caused by the lack of low-frequency signal in reflection seismic data. To resolve this difficulty, we utilize an integrated AI inversion approach combining seismic data, acoustic well logs and seismic-processing velocities. The use of well logs helps stabilizing the recursive AI inverse, and seismic-processing velocities are used to complement the low-frequency information in seismic records. To derive the low-frequency AI from seismic-processing velocity data, an empirical relation is determined by using the available acoustic logs. This method is simple and does not require subjective choices of parameters and regularization schemes as in the more sophisticated joint inversion methods. The second improvement to accurate time-lapse AI imaging consists in time-variant calibration of reflectivity. Calibration corrections consist of time shifts, amplitude corrections, spectral shaping and phase rotations. Following the calibration, average and differential reflection amplitudes are calculated, from which the average and differential AI are obtained. The approaches are applied to a time-lapse 3-D 3-C dataset from Weyburn CO2 sequestration project in southern Saskatchewan, Canada. High quality time-lapse AI volumes are obtained. Comparisons with traditional recursive and colored AI inversions (obtained without using seismic-processing velocities) show that the new method gives a better representation of spatial AI variations. Although only early stages of monitoring seismic data are available, time-lapse AI variations mapped within and near the reservoir zone suggest correlations with CO2 injection. By extending this procedure to elastic impedances, additional constraints on the variations of physical properties within the reservoir can be obtained.

Thermally actuated resonant silicon crystal nanobalances

NASA Astrophysics Data System (ADS)

Hajjam, Arash

As the potential emerging technology for next generation integrated resonant sensors and frequency references as well as electronic filters, micro-electro-mechanical resonators have attracted a lot of attention over the past decade. As a result, a wide variety of high frequency micro/nanoscale electromechanical resonators have recently been presented. MEMS resonators, as low-cost highly integrated and ultra-sensitive mass sensors, can potentially provide new opportunities and unprecedented capabilities in the area of mass sensing. Such devices can provide orders of magnitude higher mass sensitivity and resolution compared to Film Bulk Acoustic resonators (FBAR) or the conventional quartz and Surface Acoustic Wave (SAW) resonators due to their much smaller sizes and can be batch-fabricated and utilized in highly integrated large arrays at a very low cost. In this research, comprehensive experimental studies on the performance and durability of thermally actuated micromechanical resonant sensors with frequencies up to tens of MHz have been performed. The suitability and robustness of the devices have been demonstrated for mass sensing applications related to air-borne particles and organic gases. In addition, due to the internal thermo-electro-mechanical interactions, the active resonators can turn some of the consumed electronic power back into the mechanical structure and compensate for the mechanical losses. Therefore, such resonators can provide self-sustained-oscillation without the need for any electronic circuitry. This unique property has been deployed to demonstrate a prototype self-sustained sensor for air-borne particle monitoring. I have managed to overcome one of the obstacles for MEMS resonators, which is their relatively poor temperature stability. This is a major drawback when compared with the conventional quartz crystals. A significant decrease of the large negative TCF for the resonators has been attained by doping the devices with a high concentration of phosphorous, resulting in even slightly positive TCF for some of the devices. This is also expected to improve the phase noise characteristics of oscillators implemented utilizing such frequency references by eliminating the sharp dependence to electronic noise in the resonator bias current. Finally it is well known that non-uniformities in fabrication of MEMS resonators lead to variations in their frequency. I have proposed both active (non-permanent) and permanent frequency modification to compensate for variations in frequency of the MEMS resonators.

Allele frequency distribution of 1691G >A F5 (which confers Factor V Leiden) across Europe, including Slavic populations.

PubMed

Clark, Jeremy S C; Adler, Grażyna; Salkic, Nermin N; Ciechanowicz, Andrzej

2013-11-01

The allele 1691A F5, conferring Factor V Leiden, is a common risk factor in venous thromboembolism. The frequency distribution for this allele in Western Europe has been well documented; but here data from Central, Eastern and South-Eastern Europe has been included. In order to assess the significance of the collated data, a chi-squared test was applied, and Tukey tests and z-tests with Bonferroni correction were compared. A distribution with a North-Southeast band of high frequency of the 1691A F5 allele was discovered with a pocket including some Southern Slavic populations with low frequency. European countries/regions can be arbitrarily delimited into low (group 1, <2.8 %, mean 1.9 % 1691A F5 allele) or high (group 2, ≥2.8 %, mean 4.0 %) frequency groups, with many significant differences between groups, but only one intra-group difference (the Tukey test is suggested to be superior to the z-tests). In Europe a North-Southeast band of 1691A F5 high frequency has been found, clarified by inclusion of data from Central, Eastern and South-Eastern Europe, which surrounds a pocket of low frequency in the Balkans which could possibly be explained by Slavic migration. There seem to be no indications of variation in environmental selection due to geographical location.

Iterative generalized time-frequency reassignment for planetary gearbox fault diagnosis under nonstationary conditions

NASA Astrophysics Data System (ADS)

Chen, Xiaowang; Feng, Zhipeng

2016-12-01

Planetary gearboxes are widely used in many sorts of machinery, for its large transmission ratio and high load bearing capacity in a compact structure. Their fault diagnosis relies on effective identification of fault characteristic frequencies. However, in addition to the vibration complexity caused by intricate mechanical kinematics, volatile external conditions result in time-varying running speed and/or load, and therefore nonstationary vibration signals. This usually leads to time-varying complex fault characteristics, and adds difficulty to planetary gearbox fault diagnosis. Time-frequency analysis is an effective approach to extracting the frequency components and their time variation of nonstationary signals. Nevertheless, the commonly used time-frequency analysis methods suffer from poor time-frequency resolution as well as outer and inner interferences, which hinder accurate identification of time-varying fault characteristic frequencies. Although time-frequency reassignment improves the time-frequency readability, it is essentially subject to the constraints of mono-component and symmetric time-frequency distribution about true instantaneous frequency. Hence, it is still susceptible to erroneous energy reallocation or even generates pseudo interferences, particularly for multi-component signals of highly nonlinear instantaneous frequency. In this paper, to overcome the limitations of time-frequency reassignment, we propose an improvement with fine time-frequency resolution and free from interferences for highly nonstationary multi-component signals, by exploiting the merits of iterative generalized demodulation. The signal is firstly decomposed into mono-components of constant frequency by iterative generalized demodulation. Time-frequency reassignment is then applied to each generalized demodulated mono-component, obtaining a fine time-frequency distribution. Finally, the time-frequency distribution of each signal component is restored and superposed to get the time-frequency distribution of original signal. The proposed method is validated using both numerical simulated and lab experimental planetary gearbox vibration signals. The time-varying gear fault symptoms are successfully extracted, showing effectiveness of the proposed iterative generalized time-frequency reassignment method in planetary gearbox fault diagnosis under nonstationary conditions.

Radio to gamma-ray variability study of blazar S5 0716+714

DOE PAGES

Rani, B.; Krichbaum, T. P.; Fuhrmann, L.; ...

2013-03-13

In this paper, we present the results of a series of radio, optical, X-ray, and γ-ray observations of the BL Lac object S50716+714 carried out between April 2007 and January 2011. The multifrequency observations were obtained using several ground- and space-based facilities. The intense optical monitoring of the source reveals faster repetitive variations superimposed on a long-term variability trend on a time scale of ~350 days. Episodes of fast variability recur on time scales of ~60-70 days. The intense and simultaneous activity at optical and γ-ray frequencies favors the synchrotron self-Compton mechanism for the production of the high-energy emission. Twomore » major low-peaking radio flares were observed during this high optical/γ-ray activity period. The radio flares are characterized by a rising and a decaying stage and agrees with the formation of a shock and its evolution. We found that the evolution of the radio flares requires a geometrical variation in addition to intrinsic variations of the source. Different estimates yield robust and self-consistent lower limits of δ ≥ 20 and equipartition magnetic field B eq ≥ 0.36 G. Causality arguments constrain the size of emission region θ ≤ 0.004 mas. We found a significant correlation between flux variations at radio frequencies with those at optical and γ-rays. Theoptical/GeV flux variations lead the radio variability by ~65 days. The longer time delays between low-peaking radio outbursts and optical flares imply that optical flares are the precursors of radio ones. An orphan X-ray flare challenges the simple, one-zone emission models, rendering them too simple. Finally, here we also describe the spectral energy distribution modeling of the source from simultaneous data taken through different activity periods.« less

Facilitation drives 65 years of vegetation change in the Sonoran Desert

USGS Publications Warehouse

Butterfield, Bradley J.; Betancourt, Julio L.; Turner, Raymond M.; Briggs, John M.

2010-01-01

Ecological processes of low-productivity ecosystems have long been considered to be driven by abiotic controls with biotic interactions playing an insignificant role. However, existing studies present conflicting evidence concerning the roles of these factors, in part due to the short temporal extent of most data sets and inability to test indirect effects of environmental variables modulated by biotic interactions. Using structural equation modeling to analyze 65 years of perennial vegetation change in the Sonoran Desert, we found that precipitation had a stronger positive effect on recruitment beneath existing canopies than in open microsites due to reduced evaporation rates. Variation in perennial canopy cover had additional facilitative effects on juvenile recruitment, which was indirectly driven by effects of density and precipitation on cover. Mortality was strongly influenced by competition as indicated by negative density-dependence, whereas precipitation had no effect. The combined direct, indirect, and interactive facilitative effects of precipitation and cover on recruitment were substantial, as was the effect of competition on mortality, providing strong evidence for dual control of community dynamics by climate and biotic interactions. Through an empirically derived simulation model, we also found that the positive feedback of density on cover produces unique temporal abundance patterns, buffering changes in abundance from high frequency variation in precipitation, amplifying effects of low frequency variation, and decoupling community abundance from precipitation patterns at high abundance. Such dynamics should be generally applicable to low-productivity systems in which facilitation is important and can only be understood within the context of long-term variation in climatic patterns. This predictive model can be applied to better manage low-productivity ecosystems, in which variation in biogeochemical processes and trophic dynamics may be driven by positive density-dependent feedbacks that influence temporal abundance and productivity patterns.

Association between physician supply, local practice norms, and outpatient visit rates

PubMed Central

Yasaitis, Laura C.; Bynum, Julie P.W.; Skinner, Jonathan S.

2013-01-01

Background There is considerable regional variation in Medicare outpatient visit rates; such variations may be the consequence of patient health, race/ethnicity differences, patient preferences, or physician supply and beliefs about the efficacy of frequently scheduled visits. Objective To test associations between varying regional Medicare outpatient visit rates and beneficiaries’ health, race/ethnicity, preferences, and physician practice norms and supply. Methods We used Medicare claims from 2006 and 2007, and data from national surveys of three different groups in 2005 – Medicare beneficiaries, cardiologists, and primary care physicians. Regression analysis tested explanations for outpatient visit rates: patient health (self-reported and hierarchical condition category (HCC) score), self-reported race/ethnicity, preferences for care, and local physician practice norms and supply in beneficiaries’ Hospital Referral Regions (HRRs) of residence. Results Beneficiaries in the highest quintile of HCC scores experienced 4.99 more visits than those in the lowest. Beneficiaries who were black experienced 2.14 fewer visits than others with similar health and preferences. Higher care-seeking preferences were marginally significantly associated with more visits, while education and poverty were insignificant. HRRs with high physician supply and high frequency practice norms were associated with 2.04 additional visits per year, while HRRs with high supply but low frequency norms were associated with 1.45 additional visits. Adjusting for all individual beneficiary covariates explained less than 20% of the original associations between visit rates and physician supply and practice norms. Conclusion Medicare beneficiaries’ health status, race, and preferences help explain individual office visit frequency; in particular, African-American patients appear to experience lower access to care. Yet, these factors explain a small fraction of the observed regional differences associated with physician supply and beliefs about the appropriate frequency of office visits. PMID:23666491

Seismic receiver function interpretation: Ps splitting or anisotropic underplating?

NASA Astrophysics Data System (ADS)

Liu, Z.; Park, J. J.

2016-12-01

Crustal anisotropy is crucial to understanding the evolutionary history of Earth's lithosphere. Shear-wave splitting of Moho P-to-s converted phases in receiver functions has often been used to infer crustal anisotropy. In addition to estimating birefringence directly, the harmonic variations of Moho Ps phases in delay times can be used to infer splitting parameters of averaged anisotropy in the crust. However, crustal anisotropy may localize at various levels within the crust due to complex deformational processes. Layered anisotropy requires careful investigation of the distribution of anisotropy before interpreting Moho Ps splitting. In this study, we show results from stations ARU in Russia, KIP in Hawaiian Islands and LSA in Tibetan Plateau, where layered anisotropy is well constrained by intra-crust Ps conversions at high frequencies using harmonic decomposition of multiple-taper correlation receiver functions. Anisotropic velocity models are inferred by forward-modeling decomposed RF waveforms. Our results of ARU and KIP show that the harmonic behavior of Moho Ps phases can be explained by a uniformly anisotropic crust model at lower cut-off frequencies, but higher-resolution RF-signals reveal a thin, highly anisotropic layer at the base of the crust. Station LSA tells a similar story with a twist: a modest Ps birefringence is revealed at high frequencies to stem from multiple thin (5-10-km) layers of localized anisotropy within the middle crust, but no strongly-sheared basal layer is inferred. We suggest that the harmonic variation of Moho Ps phases should always be investigated as a result of anisotropic layering using RFs with frequency content above 1Hz, rather than simply reporting averaged anisotropy of the whole crust.

Predicting Achievable Fundamental Frequency Ranges in Vocalization Across Species

PubMed Central

Titze, Ingo; Riede, Tobias; Mau, Ted

2016-01-01

Vocal folds are used as sound sources in various species, but it is unknown how vocal fold morphologies are optimized for different acoustic objectives. Here we identify two main variables affecting range of vocal fold vibration frequency, namely vocal fold elongation and tissue fiber stress. A simple vibrating string model is used to predict fundamental frequency ranges across species of different vocal fold sizes. While average fundamental frequency is predominantly determined by vocal fold length (larynx size), range of fundamental frequency is facilitated by (1) laryngeal muscles that control elongation and by (2) nonlinearity in tissue fiber tension. One adaptation that would increase fundamental frequency range is greater freedom in joint rotation or gliding of two cartilages (thyroid and cricoid), so that vocal fold length change is maximized. Alternatively, tissue layers can develop to bear a disproportionate fiber tension (i.e., a ligament with high density collagen fibers), increasing the fundamental frequency range and thereby vocal versatility. The range of fundamental frequency across species is thus not simply one-dimensional, but can be conceptualized as the dependent variable in a multi-dimensional morphospace. In humans, this could allow for variations that could be clinically important for voice therapy and vocal fold repair. Alternative solutions could also have importance in vocal training for singing and other highly-skilled vocalizations. PMID:27309543

Analysis of PVA/AA based photopolymers at the zero spatial frequency limit using interferometric methods.

PubMed

Gallego, Sergi; Márquez, Andrés; Méndez, David; Ortuño, Manuel; Neipp, Cristian; Fernández, Elena; Pascual, Inmaculada; Beléndez, Augusto

2008-05-10

One of the problems associated with photopolymers as optical recording media is the thickness variation during the recording process. Different values of shrinkages or swelling are reported in the literature for photopolymers. Furthermore, these variations depend on the spatial frequencies of the gratings stored in the materials. Thickness variations can be measured using different methods: studying the deviation from the Bragg's angle for nonslanted gratings, using MicroXAM S/N 8038 interferometer, or by the thermomechanical analysis experiments. In a previous paper, we began the characterization of the properties of a polyvinyl alcohol/acrylamide based photopolymer at the lowest end of recorded spatial frequencies. In this work, we continue analyzing the thickness variations of these materials using a reflection interferometer. With this technique we are able to obtain the variations of the layers refractive index and, therefore, a direct estimation of the polymer refractive index.

Assessment of the Effect of Intestinal Permeability Probes (Lactulose And Mannitol) and Other Liquids on Digesta Residence Times in Various Segments of the Gut Determined by Wireless Motility Capsule: A Randomised Controlled Trial.

PubMed

Sequeira, Ivana R; Lentle, Roger G; Kruger, Marlena C; Hurst, Roger D

2015-01-01

Whilst the use of the mannitol/lactulose test for intestinal permeability has been long established it is not known whether the doses of these sugars modify transit time Similarly it is not known whether substances such as aspirin that are known to increase intestinal permeability to lactulose and mannitol and those such as ascorbic acid which are stated to be beneficial to gastrointestinal health also influence intestinal transit time. Gastric and intestinal transit times were determined with a SmartPill following consumption of either a lactulose mannitol solution, a solution containing 600 mg aspirin, a solution containing 500 mg of ascorbic acid or an extract of blackcurrant, and compared by doubly repeated measures ANOVA with those following consumption of the same volume of a control in a cross-over study in six healthy female volunteers. The dominant frequencies of cyclic variations in gastric pressure recorded by the Smartpill were determined by fast Fourier transforms. The gastric transit times of lactulose mannitol solutions, of aspirin solutions and of blackcurrant juice did not differ from those of the control. The gastric transit times of the ascorbic acid solutions were significantly shorter than those of the other solutions. There were no significant differences between the various solutions either in the total small intestinal or colonic transit times. The intraluminal pHs during the initial quartiles of the small intestinal transit times were lower than those in the succeeding quartiles. This pattern did not vary with the solution that was consumed. The power of the frequencies of cyclic variation in intragastric pressure recorded by the Smartpill declined exponentially with increase in frequency and did not peak at the reported physiological frequencies of gastric contractile activity. Whilst the segmental residence times were broadly similar to those using other methods, the high degree of variation between subjects generally precluded the identification of all but gross variation between treatments. The lack of any differences between treatments in either total small or large intestinal transit times indicates that the solutions administered in the lactulose mannitol test of permeability had no consistent influence on the temporal pattern of absorption. The negatively exponential profile and lack of any peaks in the frequency spectra of cyclic variation in gastric intraluminal pressure that were consistent with reported physiological frequencies of contractile activity profile suggests that the principal source of this variation is stochastic likely resulting from the effects of external events occasioned by normal daily activities on intra-abdominal pressure. Australian New Zealand Clinical Trials Registry ACTRN12615000596505.

Integrating common and rare genetic variation in diverse human populations.

PubMed

Altshuler, David M; Gibbs, Richard A; Peltonen, Leena; Altshuler, David M; Gibbs, Richard A; Peltonen, Leena; Dermitzakis, Emmanouil; Schaffner, Stephen F; Yu, Fuli; Peltonen, Leena; Dermitzakis, Emmanouil; Bonnen, Penelope E; Altshuler, David M; Gibbs, Richard A; de Bakker, Paul I W; Deloukas, Panos; Gabriel, Stacey B; Gwilliam, Rhian; Hunt, Sarah; Inouye, Michael; Jia, Xiaoming; Palotie, Aarno; Parkin, Melissa; Whittaker, Pamela; Yu, Fuli; Chang, Kyle; Hawes, Alicia; Lewis, Lora R; Ren, Yanru; Wheeler, David; Gibbs, Richard A; Muzny, Donna Marie; Barnes, Chris; Darvishi, Katayoon; Hurles, Matthew; Korn, Joshua M; Kristiansson, Kati; Lee, Charles; McCarrol, Steven A; Nemesh, James; Dermitzakis, Emmanouil; Keinan, Alon; Montgomery, Stephen B; Pollack, Samuela; Price, Alkes L; Soranzo, Nicole; Bonnen, Penelope E; Gibbs, Richard A; Gonzaga-Jauregui, Claudia; Keinan, Alon; Price, Alkes L; Yu, Fuli; Anttila, Verneri; Brodeur, Wendy; Daly, Mark J; Leslie, Stephen; McVean, Gil; Moutsianas, Loukas; Nguyen, Huy; Schaffner, Stephen F; Zhang, Qingrun; Ghori, Mohammed J R; McGinnis, Ralph; McLaren, William; Pollack, Samuela; Price, Alkes L; Schaffner, Stephen F; Takeuchi, Fumihiko; Grossman, Sharon R; Shlyakhter, Ilya; Hostetter, Elizabeth B; Sabeti, Pardis C; Adebamowo, Clement A; Foster, Morris W; Gordon, Deborah R; Licinio, Julio; Manca, Maria Cristina; Marshall, Patricia A; Matsuda, Ichiro; Ngare, Duncan; Wang, Vivian Ota; Reddy, Deepa; Rotimi, Charles N; Royal, Charmaine D; Sharp, Richard R; Zeng, Changqing; Brooks, Lisa D; McEwen, Jean E

2010-09-02

Despite great progress in identifying genetic variants that influence human disease, most inherited risk remains unexplained. A more complete understanding requires genome-wide studies that fully examine less common alleles in populations with a wide range of ancestry. To inform the design and interpretation of such studies, we genotyped 1.6 million common single nucleotide polymorphisms (SNPs) in 1,184 reference individuals from 11 global populations, and sequenced ten 100-kilobase regions in 692 of these individuals. This integrated data set of common and rare alleles, called 'HapMap 3', includes both SNPs and copy number polymorphisms (CNPs). We characterized population-specific differences among low-frequency variants, measured the improvement in imputation accuracy afforded by the larger reference panel, especially in imputing SNPs with a minor allele frequency of

Carotenoid production and phenotypic variation in Azospirillum brasilense.

PubMed

Brenholtz, Gal Reem; Tamir-Ariel, Dafna; Okon, Yaacov; Burdman, Saul

2017-06-01

We assessed the occurrence of phenotypic variation in Azospirillum brasilense strains Sp7, Cd, Sp245, Az39 and phv2 during growth in rich media, screening for variants altered in colony pigmentation or extracellular polysaccharide (EPS) production. Previous studies showed that EPS-overproducing variants of Sp7 appear frequently following starvation or growth in minimal medium. In contrast, no such variants were detected during growth in rich media in the tested strains except for few variants of phv2. Regarding alteration in colony pigmentation (from pink to white in strain Cd and from white to pink in the others), strain Sp7 showed a relatively high frequency of variation (0.009-0.026%). Strain Cd showed a lower frequency of alteration in pigmentation (0-0.008%), and this type of variation was not detected in the other strains. In A. brasilense, carotenoid synthesis is controlled by two RpoE sigma factors and their cognate ChrR anti-sigma factors, the latter acting as negative regulators of carotenoid synthesis. Here, all tested (n = 28) pink variants of Sp7 carried mutations in one of the anti-sigma factor genes, chrR1. Our findings indicate that, in A. brasilense, phenotypic variation is strain- and environment-dependent and support the central role of ChrR1 in regulation of carotenoid production. Copyright © 2017 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Significant genetic and phenotypic changes arising from clonal growth of a single spore of an arbuscular mycorrhizal fungus over multiple generations.

PubMed

Ehinger, Martine O; Croll, Daniel; Koch, Alexander M; Sanders, Ian R

2012-11-01

Arbuscular mycorrhizal fungi (AMF) are highly successful plant symbionts. They reproduce clonally producing multinucleate spores. It has been suggested that some AMF harbor genetically different nuclei. However, recent advances in sequencing the Glomus irregulare genome have indicated very low within-fungus polymorphism. We tested the null hypothesis that, with no genetic differences among nuclei, no significant genetic or phenotypic variation would occur among clonal single spore lines generated from one initial AMF spore. Furthermore, no additional variation would be expected in the following generations of single spore lines. Genetic diversity contained in one initial spore repeatedly gave rise to genetically different variants of the fungus with novel phenotypes. The genetic changes represented quantitative changes in allele frequencies, most probably as a result of changes in the frequency of genetic variation partitioned on different nuclei. The genetic and phenotypic variation is remarkable, given that it arose repeatedly from one clonal individual. Our results highlight the dynamic nature of AMF genetics. Even though within-fungus genetic variation is low, some is probably partitioned among nuclei and potentially causes changes in the phenotype. Our results are important for understanding AMF genetics, as well as for researchers and biotechnologists hoping to use AMF genetic diversity for the improvement of AMF inoculum. © 2012 The Authors. New Phytologist © 2012 New Phytologist Trust.

Seasonal variations of reflexibility and transmissibility of ULF waves propagating through the ionosphere of geomagnetic mid-latitudes

NASA Astrophysics Data System (ADS)

Prikner, K.

Using reference models of the daytime and night ionosphere of geomagnetic mid-latitudes in a quiescent period in summer, autumn and winter, the seasonal variation of ULF frequency characteristics of amplitude and energy correction factors of the ionosphere - vertical reflexibility, transmissibility and absorption, are studied. The existence of two frequency bands within the ULF range with different properties of ionospheric wave filtration is pointed out: (a) continuous band f of less than 0.1 to 0.2 Hz with the mirror effect of the ionosphere with respect to the incident wave, but with small ionospheric absorption of wave energy; and (b) a Hz band of greater than 0.2 Hz with resonance frequency windows and wave emissions with a sharply defined frequency structure. The seasonal variation from summer to winter indicates a decrease in wave energy absorption in the ionosphere and a slight displacement of the resonances towards higher frequencies.

Seasonal variations of reflexibility and transmissibility of ULF waves propagating through the ionosphere of geomagnetic mid-latitudes

NASA Astrophysics Data System (ADS)

Prikner, K.

Using reference models of the daytime and night ionosphere of geomagnetic mid-latitudes in a quiescent period in summer, autumn and winter, the seasonal variation of ULF frequency characteristics of amplitude and energy correction factors of the ionosphere - vertical reflexibility, transmissibility, are studied. The existence of two frequency bands within the ULF range with different properties of ionospheric wave filtration is pointed out: (1) continuous band f 0.1-0.2 Hz with the mirror effect of the ionosphere with respect to the incident wave, but with small ionospheric absorption of wave energy; (2) the f 0.2 Hz band with resonance frequency windows and wave emissions with a sharply defined frequency structure. The seasonal variation from summer to winter indicates a decrease in wave energy absorption in the ionosphere and a slight displacement of the resonances towards higher frequencies.

Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples

PubMed Central

2012-01-01

Background The central role of the somatotrophic axis in animal post-natal growth, development and fertility is well established. Therefore, the identification of genetic variants affecting quantitative traits within this axis is an attractive goal. However, large sample numbers are a pre-requisite for the identification of genetic variants underlying complex traits and although technologies are improving rapidly, high-throughput sequencing of large numbers of complete individual genomes remains prohibitively expensive. Therefore using a pooled DNA approach coupled with target enrichment and high-throughput sequencing, the aim of this study was to identify polymorphisms and estimate allele frequency differences across 83 candidate genes of the somatotrophic axis, in 150 Holstein-Friesian dairy bulls divided into two groups divergent for genetic merit for fertility. Results In total, 4,135 SNPs and 893 indels were identified during the resequencing of the 83 candidate genes. Nineteen percent (n = 952) of variants were located within 5' and 3' UTRs. Seventy-two percent (n = 3,612) were intronic and 9% (n = 464) were exonic, including 65 indels and 236 SNPs resulting in non-synonymous substitutions (NSS). Significant (P < 0.01) mean allele frequency differentials between the low and high fertility groups were observed for 720 SNPs (58 NSS). Allele frequencies for 43 of the SNPs were also determined by genotyping the 150 individual animals (Sequenom® MassARRAY). No significant differences (P > 0.1) were observed between the two methods for any of the 43 SNPs across both pools (i.e., 86 tests in total). Conclusions The results of the current study support previous findings of the use of DNA sample pooling and high-throughput sequencing as a viable strategy for polymorphism discovery and allele frequency estimation. Using this approach we have characterised the genetic variation within genes of the somatotrophic axis and related pathways, central to mammalian post-natal growth and development and subsequent lactogenesis and fertility. We have identified a large number of variants segregating at significantly different frequencies between cattle groups divergent for calving interval plausibly harbouring causative variants contributing to heritable variation. To our knowledge, this is the first report describing sequencing of targeted genomic regions in any livestock species using groups with divergent phenotypes for an economically important trait. PMID:22235840

Whole exome sequencing to estimate alloreactivity potential between donors and recipients in stem cell transplantation

PubMed Central

Sampson, Juliana K.; Sheth, Nihar U.; Koparde, Vishal N.; Scalora, Allison F.; Serrano, Myrna G.; Lee, Vladimir; Roberts, Catherine H.; Jameson-Lee, Max; Ferreira-Gonzalez, Andrea; Manjili, Masoud H.; Buck, Gregory A.; Neale, Michael C.; Toor, Amir A.

2016-01-01

Summary Whole exome sequencing (WES) was performed on stem cell transplant donor-recipient (D-R) pairs to determine the extent of potential antigenic variation at a molecular level. In a small cohort of D-R pairs, a high frequency of sequence variation was observed between the donor and recipient exomes independent of human leucocyte antigen (HLA) matching. Nonsynonymous, nonconservative single nucleotide polymorphisms were approximately twice as frequent in HLA-matched unrelated, compared with related D-R pairs. When mapped to individual chromosomes, these polymorphic nucleotides were uniformly distributed across the entire exome. In conclusion, WES reveals extensive nucleotide sequence variation in the exomes of HLA-matched donors and recipients. PMID:24749631

Genetic variation in laboratory and field populations of the vector of bluetongue virus, Culicoides variipennis (Diptera: Ceratopogonidae).

PubMed

Tabachnick, W J

1990-01-01

Laboratory colonies and several natural populations of the biting midge Culicoides variipennis (Coquillett) were analyzed for genetic variation at 21 electrophoretic loci. The laboratory colonies maintained high levels of genetic variation measured by average expected heterozygosities (He = 0.142 +/- 0.008), although levels were lower than those observed in field collections (He = 0.198 +/- 0.009). A field population from Colorado, analyzed five times over a 1-yr period, showed a consistent trend in the change in gene frequencies at two loci. Genetic comparisons between natural populations were consistent with the existence of two subspecies. C. variipennis variipennis and C. variipennis sonorensis Wirth & Jones.

Guyana dolphins (Sotalia guianensis) from Costa Rica emit whistles that vary with surface behaviors.

PubMed

May-Collado, Laura J

2013-10-01

Guyana dolphins show remarkable intraspecific whistle variation. This variation has been largely explained in terms of distance among populations; however, other factors such as behavior may also be important. A broadband recording system recorded the whistles of Guyana dolphins under three behavioral states. A discriminant analysis found that during social and travel events, dolphins emit whistles with high delta and minimum frequency, respectively. Whistle duration was also important in discriminating behaviors. This study indicates that behavior is an important factor contributing to whistle variation of Guyana dolphins. Understanding how dolphin whistles vary with behavioral context will advance our understanding of dolphin communication and enable appropriate comparative studies.

Seasonal variation of the upper digestive tract yeast flora of feral pigeons

USGS Publications Warehouse

Kocan, R.M.; Hasenclever, H.F.

1974-01-01

Feral pigeons were sampled over a 16-month period to determine whether their normal yeast flora varied according to season. Candida albicans and Saccharomyces telluris occurred during the entire sampling period, with C. albicans reaching its highest levels between August and January and S. telluris peaking from March through May. Candida krusei was present for 10 months but exhibited no predictable variation in density. Candida tropicalis, C. guilliermondii and Geotrichum were isolated on several occasions while C. lusitaniae, C. pseudotropicalis and Torulopsis glabrata were each isolated once. The high levels of infection and frequency of occurrence of some yeast species make the feral pigeon highly suspect as a carrier and disseminator of potentially pathogenic yeast.

Planck intermediate results: XLV. Radio spectra of northern extragalactic radio sources

DOE PAGES

Ade, P. A. R.; Aghanim, N.; Aller, H. D.; ...

2016-12-12

Continuum spectra covering centimetre to submillimetre wavelengths are presented in this paper for a northern sample of 104 extragalactic radio sources, mainly active galactic nuclei, based on four-epoch Planck data. The nine Planck frequencies, from 30 to 857 GHz, are complemented by a set of simultaneous ground-based radio observations between 1.1 and 37 GHz. The single-survey Planck data confirm that the flattest high-frequency radio spectral indices are close to zero, indicating that the original accelerated electron energy spectrum is much harder than commonly thought, with power-law index around 1.5 instead of the canonical 2.5. The radio spectra peak at highmore » frequencies and exhibit a variety of shapes. For a small set of low-z sources, we find a spectral upturn at high frequencies, indicating the presence of intrinsic cold dust. Finally, variability can generally be approximated by achromatic variations, while sources with clear signatures of evolving shocks appear to be limited to the strongest outbursts.« less

Association of autonomic nervous system and EEG scalp potential during playing 2D Grand Turismo 5.

PubMed

Subhani, Ahmad Rauf; Likun, Xia; Saeed Malik, Aamir

2012-01-01

Cerebral activation and autonomic nervous system have importance in studies such as mental stress. The aim of this study is to analyze variations in EEG scalp potential which may influence autonomic activation of heart while playing video games. Ten healthy participants were recruited in this study. Electroencephalogram (EEG) and electrocardiogram (ECG) signals were measured simultaneously during playing video game and rest conditions. Sympathetic and parasympathetic innervations of heart were evaluated from heart rate variability (HRV), derived from the ECG. Scalp potential was measured by the EEG. The results showed a significant upsurge in the value theta Fz/alpha Pz (p<0.001) while playing game. The results also showed tachycardia while playing video game as compared to rest condition (p<0.005). Normalized low frequency power and ratio of low frequency/high frequency power were significantly increased while playing video game and normalized high frequency power sank during video games. Results showed synchronized activity of cerebellum and sympathetic and parasympathetic innervation of heart.

Planck intermediate results: XLV. Radio spectra of northern extragalactic radio sources

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ade, P. A. R.; Aghanim, N.; Aller, H. D.

Continuum spectra covering centimetre to submillimetre wavelengths are presented in this paper for a northern sample of 104 extragalactic radio sources, mainly active galactic nuclei, based on four-epoch Planck data. The nine Planck frequencies, from 30 to 857 GHz, are complemented by a set of simultaneous ground-based radio observations between 1.1 and 37 GHz. The single-survey Planck data confirm that the flattest high-frequency radio spectral indices are close to zero, indicating that the original accelerated electron energy spectrum is much harder than commonly thought, with power-law index around 1.5 instead of the canonical 2.5. The radio spectra peak at highmore » frequencies and exhibit a variety of shapes. For a small set of low-z sources, we find a spectral upturn at high frequencies, indicating the presence of intrinsic cold dust. Finally, variability can generally be approximated by achromatic variations, while sources with clear signatures of evolving shocks appear to be limited to the strongest outbursts.« less

Multi-frequency Electromagnetic Induction Survey for Archaeological Prospection: Approach and Results in Han Hangu Pass and Xishan Yang in China

NASA Astrophysics Data System (ADS)

Tang, Panpan; Chen, Fulong; Jiang, Aihui; Zhou, Wei; Wang, Hongchao; Leucci, Giovanni; de Giorgi, Lara; Sileo, Maria; Luo, Rupeng; Lasaponara, Rosa; Masini, Nicola

2018-04-01

This study presents the potential of multi-frequency electromagnetic induction (EMI) in archaeology. EMI is currently less employed for archaeological prospection with respect to other geophysical techniques. It is capable of identifying shallow subsurface relics by simultaneously measuring the apparent electrical conductivity (ECa) and apparent magnetic susceptibility (MSa). Moreover, frequency sounding is able to quantify the depths and vertical shapes of buried structures. In this study, EMI surveys with five frequencies were performed at two heritage sites with different geological conditions: Han Hangu Pass characterized by cinnamon soil and Xishan Yang by sandy loams. In the first site, high ECa values were observed with variations in depth correlated to archaeological remains. Moreover, electromagnetic anomalies related to an ancient road and five kiln caves were identified. In the second site, an ancient tomb, indicating extremely low ECa and high MSa, was discovered. Its electromagnetic properties are attributed to the cavity and ferroferric oxides.

Discrete tyre model application for evaluation of vehicle limit handling performance

NASA Astrophysics Data System (ADS)

Siramdasu, Y.; Taheri, S.

2016-11-01

The goal of this study is twofold, first, to understand the transient and nonlinear effects of anti-lock braking systems (ABS), road undulations and driving dynamics on lateral performance of tyre and second, to develop objective handling manoeuvres and respective metrics to characterise these effects on vehicle behaviour. For studying the transient and nonlinear handling performance of the vehicle, the variations of relaxation length of tyre and tyre inertial properties play significant roles [Pacejka HB. Tire and vehicle dynamics. 3rd ed. Butterworth-Heinemann; 2012]. To accurately simulate these nonlinear effects during high-frequency vehicle dynamic manoeuvres, requires a high-frequency dynamic tyre model (? Hz). A 6 DOF dynamic tyre model integrated with enveloping model is developed and validated using fixed axle high-speed oblique cleat experimental data. Commercially available vehicle dynamics software CarSim® is used for vehicle simulation. The vehicle model was validated by comparing simulation results with experimental sinusoidal steering tests. The validated tyre model is then integrated with vehicle model and a commercial grade rule-based ABS model to perform various objective simulations. Two test scenarios of ABS braking in turn on a smooth road and accelerating in a turn on uneven and smooth roads are considered. Both test cases reiterated that while the tyre is operating in the nonlinear region of slip or slip angle, any road disturbance or high-frequency brake torque input variations can excite the inertial belt vibrations of the tyre. It is shown that these inertial vibrations can directly affect the developed performance metrics and potentially degrade the handling performance of the vehicle.

Spectral variation of high power microwave pulse propagating in a self-generated plasma

NASA Technical Reports Server (NTRS)

Ren, A.; Kuo, S. P.; Kossey, Paul

1995-01-01

A systematic study to understand the spectral variation of a high power microwave pulse propagating in a self-generated plasma is carried out. It includes the theoretical formulation, experimental demonstration, and computer simulations and computer experiments. The experiment of pulse propagation is conducted in a vacuum chamber filled with dry air (approximately 0.2 torr); the chamber is made of a 2 ft. cube of Plexiglas. A rectangular microwave pulse (1 microsec pulse width and 3.27 GHz carrier frequency) is fed into the cube through an S band microwave horn placed at one side of the chamber. A second S-band horn placed at the opposite side of the chamber is used to receive the transmitted pulse. The spectra of the incident pulse and transmitted pulse are then compared. As the power of the incident pulse is only slightly (less than 15%) above the breakdown threshold power of the background air, the peak of the spectrum of the transmitted pulse is upshifted from the carrier frequency 3.27 GHz of the incident pulse. However, as the power of the incident pulse exceeds the breakdown threshold power of the background air by 30%, a different phenomenon appears. The spectrum of the transmitted pulse begins to have two peaks. One is upshifted and the other one downshifted from the single peak location of the incident pulse. The amount of frequency downshift is comparable to that of the upshifted frequency. A theoretical model describing the experiment of pulse propagation in a self-generated plasma is developed. There are excellent agreements between the experimental results and computer simulations based on this theoretical model, which is also used to further carry out computer experiments identifying the role of plasma introduced wave loss on the result of frequency downshift phenomenon.

Velocity measurement by vibro-acoustic Doppler.

PubMed

Nabavizadeh, Alireza; Urban, Matthew W; Kinnick, Randall R; Fatemi, Mostafa

2012-04-01

We describe the theoretical principles of a new Doppler method, which uses the acoustic response of a moving object to a highly localized dynamic radiation force of the ultrasound field to calculate the velocity of the moving object according to Doppler frequency shift. This method, named vibro-acoustic Doppler (VAD), employs two ultrasound beams separated by a slight frequency difference, Δf, transmitting in an X-focal configuration. Both ultrasound beams experience a frequency shift because of the moving objects and their interaction at the joint focal zone produces an acoustic frequency shift occurring around the low-frequency (Δf) acoustic emission signal. The acoustic emission field resulting from the vibration of the moving object is detected and used to calculate its velocity. We report the formula that describes the relation between Doppler frequency shift of the emitted acoustic field and the velocity of the moving object. To verify the theory, we used a string phantom. We also tested our method by measuring fluid velocity in a tube. The results show that the error calculated for both string and fluid velocities is less than 9.1%. Our theory shows that in the worst case, the error is 0.54% for a 25° angle variation for the VAD method compared with an error of -82.6% for a 25° angle variation for a conventional continuous wave Doppler method. An advantage of this method is that, unlike conventional Doppler, it is not sensitive to angles between the ultrasound beams and direction of motion.

Variation in the stress response between high- and low-neuroticism female undergraduates across the menstrual cycle.

PubMed

Liu, Qing; Zhou, Renlai; Oei, Tian P S; Wang, Qingguo; Zhao, Yan; Liu, Yanfeng

2013-09-01

This study was undertaken to elucidate possible relationships between menstrual cycle stage, neuroticism and behavioral and physiological responses to a cognitive challenge. The study investigated the differences between high neuroticism and low neuroticism groups across the menstrual cycle (luteal, menstrual and ovulatory stages). The Stroop color-naming task was used as a stressor. During the task, the galvanic skin response (GSR), heart rate (HR) and HR variability (HRV) were simultaneously recorded by a polygraph. The results showed a significant difference in reaction times (RT) on the Stroop task between the high- and low-neuroticism groups during menstruation. However, there were no significant RT differences between groups during the luteal or ovulatory cycle stages. The GSR of the high-neuroticism group during menstruation was significantly lower than it was in the luteal and ovulatory stages. Moreover, during menstruation, the cardiovascular responses (high-frequency HRV (HF) and low-frequency HRV (LF)) and accuracy on the Stroop task were positively correlated, while the correlations between HF, LF and the RT were negative. The results demonstrate that during menstruation, there were consistent variations in female behavior and physiology when facing a cognitive stressor. Specifically, the high-neuroticism group was more sensitive to the stressor than the low neuroticism group, with decreased reaction time on the Stroop task, and increased GSR and HRV.

Age-Related Decline in the Variation of Dynamic Functional Connectivity: A Resting State Analysis.

PubMed

Chen, Yuanyuan; Wang, Weiwei; Zhao, Xin; Sha, Miao; Liu, Ya'nan; Zhang, Xiong; Ma, Jianguo; Ni, Hongyan; Ming, Dong

2017-01-01

Normal aging is typically characterized by abnormal resting-state functional connectivity (FC), including decreasing connectivity within networks and increasing connectivity between networks, under the assumption that the FC over the scan time was stationary. In fact, the resting-state FC has been shown in recent years to vary over time even within minutes, thus showing the great potential of intrinsic interactions and organization of the brain. In this article, we assumed that the dynamic FC consisted of an intrinsic dynamic balance in the resting brain and was altered with increasing age. Two groups of individuals ( N = 36, ages 20-25 for the young group; N = 32, ages 60-85 for the senior group) were recruited from the public data of the Nathan Kline Institute. Phase randomization was first used to examine the reliability of the dynamic FC. Next, the variation in the dynamic FC and the energy ratio of the dynamic FC fluctuations within a higher frequency band were calculated and further checked for differences between groups by non-parametric permutation tests. The results robustly showed modularization of the dynamic FC variation, which declined with aging; moreover, the FC variation of the inter-network connections, which mainly consisted of the frontal-parietal network-associated and occipital-associated connections, decreased. In addition, a higher energy ratio in the higher FC fluctuation frequency band was observed in the senior group, which indicated the frequency interactions in the FC fluctuations. These results highly supported the basis of abnormality and compensation in the aging brain and might provide new insights into both aging and relevant compensatory mechanisms.

Detection of High-Frequency Oscillations and Damping from Multi-slit Spectroscopic Observations of the Corona

NASA Astrophysics Data System (ADS)

Samanta, T.; Singh, J.; Sindhuja, G.; Banerjee, D.

2016-01-01

During the total solar eclipse of 11 July 2010, multi-slit spectroscopic observations of the solar corona were performed from Easter Island, Chile. To search for high-frequency waves, observations were taken at a high cadence in the green line at 5303 Å that is due to [Fe xiv] and the red line at 6374 Å that is due to [Fe x]. The data were analyzed to study the periodic variations in intensity, Doppler velocity, and line width using wavelet analysis. The data with high spectral and temporal resolution enabled us to study the rapid dynamical changes within coronal structures. We find that at certain locations, each parameter shows significant oscillation with periods ranging from 6 - 25 s. For the first time, we were able to detect damping of high-frequency oscillations with periods of about 10 s. If the observed damped oscillations are due to magnetohydrodynamic waves, then they can contribute significantly to the heating of the corona. From a statistical study we try to characterize the nature of the observed oscillations while considering the distribution of power in different line parameters.

Single particle dynamics in a radio-frequency produced plasma sheath

NASA Astrophysics Data System (ADS)

Rubin-Zuzic, M.; Nosenko, V.; Zhdanov, S.; Ivlev, A.; Thomas, H.; Khrapak, S.; Couedel, L.

2018-01-01

Recently different research groups have investigated the motion of a single dust particle levitated in a rf plasma. Here we describe a highly resolved experiment where a single spherical melamine formaldehyde microparticle is suspended in the plasma sheath above the lower electrode of a capacitively coupled radio-frequency discharge at controlled pressure, power and neutral gas flow rate. The particle's horizontal oscillation is investigated, from which its neutral gas damping rate, kinetic temperature and eigenfrequency of the potential trap are measured. Compared to prior experiments we report about inhomogeneous and anisotropic velocity variations.

Electron Plasmas Cooled by Cyclotron-Cavity Resonance

DOE PAGES

Povilus, A. P.; DeTal, N. D.; Evans, L. T.; ...

2016-10-21

We observe that high-Q electromagnetic cavity resonances increase the cyclotron cooling rate of pure electron plasmas held in a Penning-Malmberg trap when the electron cyclotron frequency, controlled by tuning the magnetic field, matches the frequency of standing wave modes in the cavity. For certain modes and trapping configurations, this can increase the cooling rate by factors of 10 or more. In this paper, we investigate the variation of the cooling rate and equilibrium plasma temperatures over a wide range of parameters, including the plasma density, plasma position, electron number, and magnetic field.

Total variation regularization for seismic waveform inversion using an adaptive primal dual hybrid gradient method

NASA Astrophysics Data System (ADS)

Yong, Peng; Liao, Wenyuan; Huang, Jianping; Li, Zhenchuan

2018-04-01

Full waveform inversion is an effective tool for recovering the properties of the Earth from seismograms. However, it suffers from local minima caused mainly by the limited accuracy of the starting model and the lack of a low-frequency component in the seismic data. Because of the high velocity contrast between salt and sediment, the relation between the waveform and velocity perturbation is strongly nonlinear. Therefore, salt inversion can easily get trapped in the local minima. Since the velocity of salt is nearly constant, we can make the most of this characteristic with total variation regularization to mitigate the local minima. In this paper, we develop an adaptive primal dual hybrid gradient method to implement total variation regularization by projecting the solution onto a total variation norm constrained convex set, through which the total variation norm constraint is satisfied at every model iteration. The smooth background velocities are first inverted and the perturbations are gradually obtained by successively relaxing the total variation norm constraints. Numerical experiment of the projection of the BP model onto the intersection of the total variation norm and box constraints has demonstrated the accuracy and efficiency of our adaptive primal dual hybrid gradient method. A workflow is designed to recover complex salt structures in the BP 2004 model and the 2D SEG/EAGE salt model, starting from a linear gradient model without using low-frequency data below 3 Hz. The salt inversion processes demonstrate that wavefield reconstruction inversion with a total variation norm and box constraints is able to overcome local minima and inverts the complex salt velocity layer by layer.

Complexity and diversity.

PubMed

Doebeli, Michael; Ispolatov, Iaroslav

2010-04-23

The mechanisms for the origin and maintenance of biological diversity are not fully understood. It is known that frequency-dependent selection, generating advantages for rare types, can maintain genetic variation and lead to speciation, but in models with simple phenotypes (that is, low-dimensional phenotype spaces), frequency dependence needs to be strong to generate diversity. However, we show that if the ecological properties of an organism are determined by multiple traits with complex interactions, the conditions needed for frequency-dependent selection to generate diversity are relaxed to the point where they are easily satisfied in high-dimensional phenotype spaces. Mathematically, this phenomenon is reflected in properties of eigenvalues of quadratic forms. Because all living organisms have at least hundreds of phenotypes, this casts the potential importance of frequency dependence for the origin and maintenance of diversity in a new light.

Local oscillator induced degradation of medium-term stability in passive atomic frequency standards

NASA Technical Reports Server (NTRS)

Dick, G. John; Prestage, John D.; Greenhall, Charles A.; Maleki, Lute

1990-01-01

As the performance of passive atomic frequency standards improves, a new limitation is encountered due to frequency fluctuations in an ancillary local oscillator (L.O.). The effect is due to time variation in the gain of the feedback which compensates L.O. frequency fluctuations. The high performance promised by new microwave and optical trapped ion standards may be severely compromised by this effect. Researchers present an analysis of this performance limitation for the case of sequentially interrogated standards. The time dependence of the sensitivity of the interrogation process to L.O. frequency fluctuations is evaluated for single-pulse and double-pulse Ramsey RF interrogation and for amplitude modulated pulses. The effect of these various time dependencies on performance of the standard is calculated for an L.O. with frequency fluctuations showing a typical 1/f spectral density. A limiting 1/sq. root gamma dependent deviation of frequency fluctuations is calculated as a function of pulse lengths, dead time, and pulse overlap. Researchers also present conceptual and hardware-oriented solutions to this problem which achieve a much more nearly constant sensitivity to L.O. fluctuations. Solutions involve use of double-pulse interrogation; alternate interrogation of multiple traps so that the dead time of one trap can be covered by operation of the other; and the use of double-pulse interrogation for two traps, so that during the time of the RF pulses, the increasing sensitivity of one trap tends to compensate for the decreasing sensitivity of the other. A solution making use of amplified-modulated pulses is also presented which shows nominally zero time variation.

The high-frequency dispersion coefficient for the Rayleigh velocity in a vertically inhomogeneous anisotropic half-space.

PubMed

Shuvalov, A L

2008-05-01

For an arbitrary anisotropic half-space with continuous vertical variation of material properties, an explicit closed-form expression for the coefficient B of high-frequency dispersion of the Rayleigh velocity v(R)(omega) approximately v(R)(0)(1+B/omega) is derived. The result involves two matrices, one consisting of the surface-traction derivatives in velocity and the other of its Wentzel-Kramers-Brillouin coefficients, which are contracted with an amplitude vector of the Rayleigh wave in the reference homogeneous half-space. The "ingredients" are routinely defined through the fundamental elasticity matrix and its first derivative, both taken at v=v(R)(0) and referred to the surface.

Calibrating 15 years of GOLF data

NASA Astrophysics Data System (ADS)

Davies, G. R.; García, R. A.

2011-12-01

The GOLF resonant scattering spectrophotometer aboard SoHO has now provided 15 years of continuous high precision Sun-as-a-star radial-velocity measurements. This length of time series provides very high resolution in the frequency domain and is combined with very good long-term instrumental stability. These are the requirements for measuring the low-l low-frequency global oscillations of the Sun that will unlock the secrets of the solar core. However, before the scientifically interesting gravity and mixed modes of oscillation fully reveal themselves, a correction and calibration of the whole data set is required. Here we present work towards producing a 15 year GOLF data set corrected for instrumental ageing and thermal variation.

Parameter dependence of high-frequency nonlinear oscillations and intrinsic chaos in short GaAs/(Al, Ga)As superlattices

NASA Astrophysics Data System (ADS)

Essen, Jonathan; Ruiz-Garcia, Miguel; Jenkins, Ian; Carretero, Manuel; Bonilla, Luis L.; Birnir, Björn

2018-04-01

We explore the design parameter space of short (5-25 period), n-doped, Ga/(Al,Ga)As semiconductor superlattices (SSLs) in the sequential resonant tunneling regime. We consider SSLs at cool (77 K) and warm (295 K) temperatures, simulating the electronic response to variations in (a) the number of SSL periods, (b) the contact conductivity, and (c) the strength of disorder (aperiodicities). Our analysis shows that the chaotic dynamical phases exist on a number of sub-manifolds of codimension zero within the design parameter space. This result provides an encouraging guide towards the experimental observation of high-frequency intrinsic dynamical chaos in shorter SSLs.

High-resolution emission spectra of pulsed terahertz quantum-cascade lasers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ikonnikov, A. V., E-mail: antikon@ipm.sci-nnov.ru; Antonov, A. V.; Lastovkin, A. A.

The spectra of pulsed terahertz quantum-cascade lasers were measured with high spectral resolution. The characteristic line width at half maximum was 0.01 cm{sup -1}; it is controlled by laser temperature variations during the supply voltage pulse. It was shown that an increase in the laser temperature leads to a decrease in the emission frequency, which is caused by an increase in the effective refractive index of the active region. It was also found that a decrease in the supply voltage results in a decrease in the emission frequency, which is caused by a change in the energy of diagonal transitionsmore » between lasing levels.« less

Error Analysis of Wind Measurements for the University of Illinois Sodium Doppler Temperature System

NASA Technical Reports Server (NTRS)

Pfenninger, W. Matthew; Papen, George C.

1992-01-01

Four-frequency lidar measurements of temperature and wind velocity require accurate frequency tuning to an absolute reference and long term frequency stability. We quantify frequency tuning errors for the Illinois sodium system, to measure absolute frequencies and a reference interferometer to measure relative frequencies. To determine laser tuning errors, we monitor the vapor cell and interferometer during lidar data acquisition and analyze the two signals for variations as functions of time. Both sodium cell and interferometer are the same as those used to frequency tune the laser. By quantifying the frequency variations of the laser during data acquisition, an error analysis of temperature and wind measurements can be calculated. These error bounds determine the confidence in the calculated temperatures and wind velocities.

Towards a High Temporal Frequency Grass Canopy Thermal IR Model for Background Signatures

NASA Technical Reports Server (NTRS)

Ballard, Jerrell R., Jr.; Smith, James A.; Koenig, George G.

2004-01-01

In this paper, we present our first results towards understanding high temporal frequency thermal infrared response from a dense plant canopy and compare the application of our model, driven both by slowly varying, time-averaged meteorological conditions and by high frequency measurements of local and within canopy profiles of relative humidity and wind speed, to high frequency thermal infrared observations. Previously, we have employed three-dimensional ray tracing to compute the intercepted and scattered radiation fluxes and for final scene rendering. For the turbulent fluxes, we employed simple resistance models for latent and sensible heat with one-dimensional profiles of relative humidity and wind speed. Our modeling approach has proven successful in capturing the directional and diurnal variation in background thermal infrared signatures. We hypothesize that at these scales, where the model is typically driven by time-averaged, local meteorological conditions, the primary source of thermal variance arises from the spatial distribution of sunlit and shaded foliage elements within the canopy and the associated radiative interactions. In recent experiments, we have begun to focus on the high temporal frequency response of plant canopies in the thermal infrared at 1 second to 5 minute intervals. At these scales, we hypothesize turbulent mixing plays a more dominant role. Our results indicate that in the high frequency domain, the vertical profile of temperature change is tightly coupled to the within canopy wind speed In the results reported here, the canopy cools from the top down with increased wind velocities and heats from the bottom up at low wind velocities. .

Statistical analysis of 59 inspected SSME HPFTP turbine blades (uncracked and cracked)

NASA Technical Reports Server (NTRS)

Wheeler, John T.

1987-01-01

The numerical results of statistical analysis of the test data of Space Shuttle Main Engine high pressure fuel turbopump second-stage turbine blades, including some with cracks are presented. Several statistical methods use the test data to determine the application of differences in frequency variations between the uncracked and cracked blades.

Autonomic Regulation on the Stroop Predicts Reading Achievement in School Age Children

ERIC Educational Resources Information Center

Becker, Derek R.; Carrere, Sybil; Siler, Chelsea; Jones, Stephanie; Bowie, Bonnie; Cooke, Cheryl

2012-01-01

In this study we examined high frequency heart rate variability (HF-HRV, a parasympathetic index) both at rest and during challenge, to assess if variations in cardiovascular activity measured during a Stroop task could be used to predict reading achievement in typically developing children. Reading achievement was examined using the Peabody…

The functional spectrum of low-frequency coding variation.

PubMed

Marth, Gabor T; Yu, Fuli; Indap, Amit R; Garimella, Kiran; Gravel, Simon; Leong, Wen Fung; Tyler-Smith, Chris; Bainbridge, Matthew; Blackwell, Tom; Zheng-Bradley, Xiangqun; Chen, Yuan; Challis, Danny; Clarke, Laura; Ball, Edward V; Cibulskis, Kristian; Cooper, David N; Fulton, Bob; Hartl, Chris; Koboldt, Dan; Muzny, Donna; Smith, Richard; Sougnez, Carrie; Stewart, Chip; Ward, Alistair; Yu, Jin; Xue, Yali; Altshuler, David; Bustamante, Carlos D; Clark, Andrew G; Daly, Mark; DePristo, Mark; Flicek, Paul; Gabriel, Stacey; Mardis, Elaine; Palotie, Aarno; Gibbs, Richard

2011-09-14

Rare coding variants constitute an important class of human genetic variation, but are underrepresented in current databases that are based on small population samples. Recent studies show that variants altering amino acid sequence and protein function are enriched at low variant allele frequency, 2 to 5%, but because of insufficient sample size it is not clear if the same trend holds for rare variants below 1% allele frequency. The 1000 Genomes Exon Pilot Project has collected deep-coverage exon-capture data in roughly 1,000 human genes, for nearly 700 samples. Although medical whole-exome projects are currently afoot, this is still the deepest reported sampling of a large number of human genes with next-generation technologies. According to the goals of the 1000 Genomes Project, we created effective informatics pipelines to process and analyze the data, and discovered 12,758 exonic SNPs, 70% of them novel, and 74% below 1% allele frequency in the seven population samples we examined. Our analysis confirms that coding variants below 1% allele frequency show increased population-specificity and are enriched for functional variants. This study represents a large step toward detecting and interpreting low frequency coding variation, clearly lays out technical steps for effective analysis of DNA capture data, and articulates functional and population properties of this important class of genetic variation.

Variation of consumer contact with household products: a preliminary investigation.

PubMed

Weegels, M E; van Veen, M P

2001-06-01

Little information is available on product use by consumers, which severely hampers exposure estimation for consumer products. This article describes actual contact with several consumer products, specifically dishwashing detergents, cleaning products, and hair styling products. How and where products are handled, as well as the duration, frequency, and amount of use were studied by means of diaries, in-home observations, and measurements. This study addressed the question, "To what extent are frequency, duration, and amount of use associated?" Findings showed that there was a large intra- as well as interindividual variation in frequency, duration, and amount of use, with the interindividual variation being considerably larger. At the same time, results showed that, for a given activity, users tended to follow their own routine. Few relations were found among frequency, duration, and amount of use. It was concluded that among persons, frequency, duration, and amount of product act in practice as independent parameters. Diaries appear to be quite suitable for gaining insight into frequently used products. Observations of usage, recorded on video, were indispensable for obtaining particular information on product use. In addition, home visits enabled the collection of specific measurements. Although diaries and home visits are time-consuming, the combination provided insight into variation as well as relations among frequency, duration, and amount of use.

Variations in High-frequency Oscillations of Tropical Cyclones over the Western North Pacific

NASA Astrophysics Data System (ADS)

Chen, Shumin; Li, Weibiao; Wen, Zhiping; Zhou, Mingsen; Lu, Youyu; Qian, Yu-Kun; Liu, Haoya; Fang, Rong

2018-04-01

Variations in the high-frequency oscillations of tropical cyclones (TCs) over the western North Pacific (WNP) are studied in numerical model simulations. Power spectrum analysis of maximum wind speeds at 10 m (MWS10) from an ensemble of 15 simulated TCs shows that oscillations are significant for all TCs. The magnitudes of oscillations in MWS10 are similar in the WNP and South China Sea (SCS); however, the mean of the averaged significant periods in the SCS (1.93 h) is shorter than that in the open water of the WNP (2.83 h). The shorter period in the SCS is examined through an ensemble of simulations, and a case simulation as well as a sensitivity experiment in which the continent is replaced by ocean for Typhoon Hagupit (2008). The analysis of the convergence efficiency within the boundary layer suggests that the shorter periods in the SCS are possibly due to the stronger terrain effect, which intensifies convergence through greater friction. The enhanced convergence strengthens the disturbance of the gradient and thermal wind balances, and then contributes to the shorter oscillation periods in the SCS.

Phonon quarticity induced by changes in phonon-tracked hybridization during lattice expansion and its stabilization of rutile TiO 2

DOE PAGES

Lan, Tian; Li, Chen W.; Hellman, O.; ...

2015-08-11

Although the rutile structure of TiO 2 is stable at high temperatures, the conventional quasiharmonic approximation predicts that several acoustic phonons decrease anomalously to zero frequency with thermal expansion, incorrectly predicting a structural collapse at temperatures well below 1000 K. In this paper, inelastic neutron scattering was used to measure the temperature dependence of the phonon density of states (DOS) of rutile TiO 2 from 300 to 1373 K. Surprisingly, these anomalous acoustic phonons were found to increase in frequency with temperature. First-principles calculations showed that with lattice expansion, the potentials for the anomalous acoustic phonons transform from quadratic tomore » quartic, stabilizing the rutile phase at high temperatures. In these modes, the vibrational displacements of adjacent Ti and O atoms cause variations in hybridization of 3d electrons of Ti and 2p electrons of O atoms. Finally, with thermal expansion, the energy variation in this “phonon-tracked hybridization” flattens the bottom of the interatomic potential well between Ti and O atoms, and induces a quarticity in the phonon potential.« less

Quantification of peripheral and central blood pressure variability using a time-frequency method.

PubMed

Kouchaki, Z; Butlin, M; Qasem, A; Avolio, A P

2016-08-01

Systolic blood pressure variability (BPV) is associated with cardiovascular events. As the beat-to-beat variation of blood pressure is due to interaction of several cardiovascular control systems operating with different response times, assessment of BPV by spectral analysis using the continuous measurement of arterial pressure in the finger is used to differentiate the contribution of these systems in regulating blood pressure. However, as baroreceptors are centrally located, this study considered applying a continuous aortic pressure signal estimated noninvasively from finger pressure for assessment of systolic BPV by a time-frequency method using Short Time Fourier Transform (STFT). The average ratio of low frequency and high frequency power band (LF PB /HF PB ) was computed by time-frequency decomposition of peripheral systolic pressure (pSBP) and derived central aortic systolic blood pressure (cSBP) in 30 healthy subjects (25-62 years) as a marker of balance between cardiovascular control systems contributing in low and high frequency blood pressure variability. The results showed that the BPV assessed from finger pressure (pBPV) overestimated the BPV values compared to that assessed from central aortic pressure (cBPV) for identical cardiac cycles (P<;0.001), with the overestimation being greater at higher power.

Effects of the rate of formant-frequency variation on the grouping of formants in speech perception.

PubMed

Summers, Robert J; Bailey, Peter J; Roberts, Brian

2012-04-01

How speech is separated perceptually from other speech remains poorly understood. Recent research suggests that the ability of an extraneous formant to impair intelligibility depends on the modulation of its frequency, but not its amplitude, contour. This study further examined the effect of formant-frequency variation on intelligibility by manipulating the rate of formant-frequency change. Target sentences were synthetic three-formant (F1 + F2 + F3) analogues of natural utterances. Perceptual organization was probed by presenting stimuli dichotically (F1 + F2C + F3C; F2 + F3), where F2C + F3C constitute a competitor for F2 and F3 that listeners must reject to optimize recognition. Competitors were derived using formant-frequency contours extracted from extended passages spoken by the same talker and processed to alter the rate of formant-frequency variation, such that rate scale factors relative to the target sentences were 0, 0.25, 0.5, 1, 2, and 4 (0 = constant frequencies). Competitor amplitude contours were either constant, or time-reversed and rate-adjusted in parallel with the frequency contour. Adding a competitor typically reduced intelligibility; this reduction increased with competitor rate until the rate was at least twice that of the target sentences. Similarity in the results for the two amplitude conditions confirmed that formant amplitude contours do not influence across-formant grouping. The findings indicate that competitor efficacy is not tuned to the rate of the target sentences; most probably, it depends primarily on the overall rate of frequency variation in the competitor formants. This suggests that, when segregating the speech of concurrent talkers, differences in speech rate may not be a significant cue for across-frequency grouping of formants.

Testing the high turbulence level breakdown of low-frequency gyrokinetics against high-frequency cyclokinetic simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Zhao, E-mail: zhao.deng@foxmail.com; Waltz, R. E.

2015-05-15

This paper presents numerical simulations of the nonlinear cyclokinetic equations in the cyclotron harmonic representation [R. E. Waltz and Zhao Deng, Phys. Plasmas 20, 012507 (2013)]. Simulations are done with a local flux-tube geometry and with the parallel motion and variation suppressed using a newly developed rCYCLO code. Cyclokinetic simulations dynamically follow the high-frequency ion gyro-phase motion which is nonlinearly coupled into the low-frequency drift-waves possibly interrupting and suppressing gyro-averaging and increasing the transport over gyrokinetic levels. By comparing the more fundamental cyclokinetic simulations with the corresponding gyrokinetic simulations, the breakdown of gyrokinetics at high turbulence levels is quantitatively testedmore » over a range of relative ion cyclotron frequency 10 < Ω*{sup  }< 100 where Ω*{sup  }= 1/ρ*, and ρ* is the relative ion gyroradius. The gyrokinetic linear mode rates closely match the cyclokinetic low-frequency rates for Ω*{sup  }> 5. Gyrokinetic transport recovers cyclokinetic transport at high relative ion cyclotron frequency (Ω*{sup  }≥ 50) and low turbulence level as required. Cyclokinetic transport is found to be lower than gyrokinetic transport at high turbulence levels and low-Ω* values with stable ion cyclotron (IC) modes. The gyrokinetic approximation is found to break down when the density perturbations exceed 20%. For cyclokinetic simulations with sufficiently unstable IC modes and sufficiently low Ω*{sup  }∼ 10, the high-frequency component of cyclokinetic transport level can exceed the gyrokinetic transport level. However, the low-frequency component of the cyclokinetic transport and turbulence level does not exceed that of gyrokinetics. At higher and more physically relevant Ω*{sup  }≥ 50 values and physically realistic IC driving rates, the low-frequency component of the cyclokinetic transport and turbulence level is still smaller than that of gyrokinetics. Thus, the cyclokinetic simulations do not account for the so-called “L-mode near edge short fall” seen in some low-frequency gyrokinetic transport and turbulence simulations.« less

NYX mutations in four families with high myopia with or without CSNB1

PubMed Central

Zhou, Lin; Song, Xiusheng; Li, Yin; Li, Hongyan; Dan, Handong

2015-01-01

Purpose Mutations in the NYX gene are known to cause complete congenital stationary night blindness (CSNB1), which is always accompanied by high myopia. In this study, we aimed to investigate the association between NYX mutations and high myopia with or without CSNB1. Methods Four Chinese families having high myopia with or without CSNB1 and 96 normal controls were recruited. We searched for mutations in the NYX gene using Sanger sequencing. Further analyses of the detected variations in the available family members were performed, and the frequencies of the detected variations in 96 normal controls were determined to verify our deduction. The effect of each variation on the nyctalopin protein was predicted using online tools. Results Four potential pathogenic variations in the NYX gene were found in four families with high myopia with or without CSNB1. Three of the four variants were novel (c.626G>C; c.121delG; c.335T>C). The previously identified variant, c.529_530delGCinsAT, was found in an isolated highly myopic patient and an affected brother, but the other affected brother did not carry the same variation. Further linkage analyses of this family showed a coinheritance of markers at MYP1. These four mutations were not identified in the 96 normal controls. Conclusions Our study expands the mutation spectrum of NYX for cases of high myopia with CSNB1; however, more evidence is needed to elucidate the pathogenic effects of NYX on isolated high myopia. PMID:25802485

Spatial and temporal variations of thunderstorm activities over Sri Lanka

NASA Astrophysics Data System (ADS)

Sonnadara, Upul

2016-05-01

Spatial and temporal variation of frequencies of thunderstorms over Sri Lanka using thunder day data is presented. A thunder day is simply a calendar day in which thunder is heard at least once at a given location. Two sets of data were collected and analyzed: annual totals for 10 climatological stations for a period of 50 years and monthly totals for 20 climatological stations for a period of 20 years. The average annual thunder days over Sri Lanka was found to be 76. Among the climatological stations considered, a high number of annual thunder days was recorded in Ratnapura (150 days/year), followed by Colombo (108 days/year) and Bandarawela (106 days/year). It appears that there are no widespread long-term increasing or decreasing trends in thunderstorm frequencies. However, Colombo, the capital of Sri Lanka which has over two million people shows an increasing trend of 0.8 thunder days per year. Although there is a high variability between stations reporting the number of thunder days, the overall pattern within a year is clear. Thunderstorm frequencies are high during two periods: March-May and September-November, which coincide with the first inter-monsoon and second inter-monsoon periods. Compared to the dry zone, the wet zone, especially the southwestern region, has high thunderstorm activity. There is a clear spatial difference in thunderstorm activities during the southwest and northeast monsoon seasons. During both these seasons, enhanced thunderstorm activities are reported on the leeward side of the mountain range. A slight reduction in the thunderstorm activities was found in the high elevation areas of the hill country compared to the surrounding areas. A lightning ground flash density map derived using annual thunder days is also presented.

Calculation of gas turbine characteristic

NASA Astrophysics Data System (ADS)

Mamaev, B. I.; Murashko, V. L.

2016-04-01

The reasons and regularities of vapor flow and turbine parameter variation depending on the total pressure drop rate π* and rotor rotation frequency n are studied, as exemplified by a two-stage compressor turbine of a power-generating gas turbine installation. The turbine characteristic is calculated in a wide range of mode parameters using the method in which analytical dependences provide high accuracy for the calculated flow output angle and different types of gas dynamic losses are determined with account of the influence of blade row geometry, blade surface roughness, angles, compressibility, Reynolds number, and flow turbulence. The method provides satisfactory agreement of results of calculation and turbine testing. In the design mode, the operation conditions for the blade rows are favorable, the flow output velocities are close to the optimal ones, the angles of incidence are small, and the flow "choking" modes (with respect to consumption) in the rows are absent. High performance and a nearly axial flow behind the turbine are obtained. Reduction of the rotor rotation frequency and variation of the pressure drop change the flow parameters, the parameters of the stages and the turbine, as well as the form of the characteristic. In particular, for decreased n, nonmonotonic variation of the second stage reactivity with increasing π* is observed. It is demonstrated that the turbine characteristic is mainly determined by the influence of the angles of incidence and the velocity at the output of the rows on the losses and the flow output angle. The account of the growing flow output angle due to the positive angle of incidence for decreased rotation frequencies results in a considerable change of the characteristic: poorer performance, redistribution of the pressure drop at the stages, and change of reactivities, growth of the turbine capacity, and change of the angle and flow velocity behind the turbine.

Studying the Fine Structure and Temporal Variations of the Zodiacal Cloud and Asteroidal Dust Bands Using the 3-Year Near-IR COBE-DIRBE Data

NASA Technical Reports Server (NTRS)

Jayaraman, Sumita

1999-01-01

The report presents the results of the data analyses of the DIRBE-COBE data set to study the structure of the zodiacal cloud in the near-infrared wavebands at 1.2, 2.2, and 3.4 microns. The cloud has been divided into two components which have been analyzed and studied separately. The annual variation of the flux in the smooth or low frequency component has been measured in all three bands and the presence of any asymmetries due to the Earth's resonant ring have been studied. The high frequency component which primarily consisted of the asteroidal dust bands. Extensive and careful co-addition was done to extract the central bands in all three wavebands. The ten-degree bands are present in the 1.2 and 2.2 microns but not in the 3.4 micron waveband.

Grain size dependence of dielectric relaxation in cerium oxide as high-k layer

PubMed Central

2013-01-01

Cerium oxide (CeO2) thin films used liquid injection atomic layer deposition (ALD) for deposition and ALD procedures were run at substrate temperatures of 150°C, 200°C, 250°C, 300°C, and 350°C, respectively. CeO2 were grown on n-Si(100) wafers. Variations in the grain sizes of the samples are governed by the deposition temperature and have been estimated using Scherrer analysis of the X-ray diffraction patterns. The changing grain size correlates with the changes seen in the Raman spectrum. Strong frequency dispersion is found in the capacitance-voltage measurement. Normalized dielectric constant measurement is quantitatively utilized to characterize the dielectric constant variation. The relationship extracted between grain size and dielectric relaxation for CeO2 suggests that tuning properties for improved frequency dispersion can be achieved by controlling the grain size, hence the strain at the nanoscale dimensions. PMID:23587419

The effect of individual variation on the structure and function of interaction networks in harvester ants

PubMed Central

Pinter-Wollman, Noa; Wollman, Roy; Guetz, Adam; Holmes, Susan; Gordon, Deborah M.

2011-01-01

Social insects exhibit coordinated behaviour without central control. Local interactions among individuals determine their behaviour and regulate the activity of the colony. Harvester ants are recruited for outside work, using networks of brief antennal contacts, in the nest chamber closest to the nest exit: the entrance chamber. Here, we combine empirical observations, image analysis and computer simulations to investigate the structure and function of the interaction network in the entrance chamber. Ant interactions were distributed heterogeneously in the chamber, with an interaction hot-spot at the entrance leading further into the nest. The distribution of the total interactions per ant followed a right-skewed distribution, indicating the presence of highly connected individuals. Numbers of ant encounters observed positively correlated with the duration of observation. Individuals varied in interaction frequency, even after accounting for the duration of observation. An ant's interaction frequency was explained by its path shape and location within the entrance chamber. Computer simulations demonstrate that variation among individuals in connectivity accelerates information flow to an extent equivalent to an increase in the total number of interactions. Individual variation in connectivity, arising from variation among ants in location and spatial behaviour, creates interaction centres, which may expedite information flow. PMID:21490001

Length Variation, Heteroplasmy and Sequence Divergence in the Mitochondrial DNA of Four Species of Sturgeon (Acipenser)

PubMed Central

Brown, J. R.; Beckenbach, K.; Beckenbach, A. T.; Smith, M. J.

1996-01-01

The extent of mtDNA length variation and heteroplasmy as well as DNA sequences of the control region and two tRNA genes were determined for four North American sturgeon species: Acipenser transmontanus, A. medirostris, A. fulvescens and A. oxyrhnychus. Across the Continental Divide, a division in the occurrence of length variation and heteroplasmy was observed that was concordant with species biogeography as well as with phylogenies inferred from restriction fragment length polymorphisms (RFLP) of whole mtDNA and pairwise comparisons of unique sequences of the control region. In all species, mtDNA length variation was due to repeated arrays of 78-82-bp sequences each containing a D-loop strand synthesis termination associated sequence (TAS). Individual repeats showed greater sequence conservation within individuals and species rather than between species, which is suggestive of concerted evolution. Differences in the frequencies of multiple copy genomes and heteroplasmy among the four species may be ascribed to differences in the rates of recurrent mutation. A mechanism that may offset the high rate of mutation for increased copy number is suggested on the basis that an increase in the number of functional TAS motifs might reduce the frequency of successfully initiated H-strand replications. PMID:8852850

Optical pressure/density measuring means

DOEpatents

Veligdan, James T.

1995-05-09

An apparatus and method for rapidly and accurately determining the pressure of a fluid medium in either a static or dynamic state. The pressure is determined by making a measurement of the velocity of a light beam that is directed through the fluid medium along a pathway that enables an integrated pressure measurement to be made along the pathway, rather than making such a measurement only at a single point in the medium. A HeNe laser is configured to emit a beam of two frequencies separated by about 2 MHz. One of these beam frequencies is directed through the fluid medium and is reflected back through the medium to a non-linear diode detector. The other beam frequency is passed directly to a diode detector without traversing said medium. The diode detector is operated to determine the frequency shift or beat frequency between the two beam frequencies. Any variation in the frequency of said reflected beam that is caused by a change in its velocity as it is passed through the fluid medium causes a change in the beat frequency. This beat frequency change is then converted to an output signal value corresponding to the pressure of the medium. The measurement instrument apparatus is remotely positioned relative to the medium being measured, thus the apparatus is immune from electro-magnetic interference and can operate in conditions of high radiation, corrosion and extraordinarily high temperature.

Optical pressure/density measuring means

DOEpatents

Veligdan, J.T.

1995-05-09

An apparatus and method are disclosed for rapidly and accurately determining the pressure of a fluid medium in either a static or dynamic state. The pressure is determined by making a measurement of the velocity of a light beam that is directed through the fluid medium along a pathway that enables an integrated pressure measurement to be made along the pathway, rather than making such a measurement only at a single point in the medium. A HeNe laser is configured to emit a beam of two frequencies separated by about 2 MHz. One of these beam frequencies is directed through the fluid medium and is reflected back through the medium to a non-linear diode detector. The other beam frequency is passed directly to a diode detector without traversing said medium. The diode detector is operated to determine the frequency shift or beat frequency between the two beam frequencies. Any variation in the frequency of said reflected beam that is caused by a change in its velocity as it is passed through the fluid medium causes a change in the beat frequency. This beat frequency change is then converted to an output signal value corresponding to the pressure of the medium. The measurement instrument apparatus is remotely positioned relative to the medium being measured, thus the apparatus is immune from electro-magnetic interference and can operate in conditions of high radiation, corrosion and extraordinarily high temperature. 4 figs.

Insight into large-scale topography on analysis of high-frequency Rayleigh waves

NASA Astrophysics Data System (ADS)

Ping, Ping; Chu, Risheng; Chong, Jiajun; Ni, Sidao; Zhang, Yu

2018-03-01

The dispersion of surface waves could be biased in regions where topography is comparable to the wavelength. We investigate the effects on high-frequency Rayleigh waves propagating in a typical massif model through numerical simulations. High-frequency Rayleigh waves have relatively higher signal-to-noise ratios (SNR) using the Q component in the LQT coordinate system, perpendicular to the local free surface in these topographic models. When sources and stations are located at different sides of the massif, the conventional dispersion image overestimates phase velocities of Rayleigh waves, as much as 25% with topographic height/width ratio (H/r) > 0.5. The dispersion perturbation is more distinctive for fundamental modes. Using a two-layer model, the thickness deviation (ΔD/D) may be significant in surface-wave inversion due to the variation of H/r and the thickness of the first layer. These phenomena cannot be ignored in surface-wave interpretations, nevertheless they are trivial for the source and stations located at the same side of the massif.

Perceived Annoyance to Noise Produced by a Distributed Electric Propulsion High Lift System

NASA Technical Reports Server (NTRS)

Palumbo, Dan; Rathsam, Jonathan; Christian, Andrew; Rafaelof, Menachem

2016-01-01

Results of a psychoacoustic test performed to understand the relative annoyance to noise produced by several configurations of a distributed electric propulsion high lift system are given. It is found that the number of propellers in the system is a major factor in annoyance perception. This is an intuitive result as annoyance increases, in general, with frequency, and, the blade passage frequency of the propellers increases with the number of propellers. Additionally, the data indicate that having some variation in the blade passage frequency from propeller-to-propeller is beneficial as it reduces the high tonality generated when all the propellers are spinning in synchrony at the same speed. The propellers can be set to spin at different speeds, but it was found that allowing the motor controllers to drift within 1% of nominal settings produced the best results (lowest overall annoyance). The methodology employed has been demonstrated to be effective in providing timely feedback to designers in the early stages of design development.

Knowledge discovery from high-frequency stream nitrate concentrations: hydrology and biology contributions.

PubMed

Aubert, Alice H; Thrun, Michael C; Breuer, Lutz; Ultsch, Alfred

2016-08-30

High-frequency, in-situ monitoring provides large environmental datasets. These datasets will likely bring new insights in landscape functioning and process scale understanding. However, tailoring data analysis methods is necessary. Here, we detach our analysis from the usual temporal analysis performed in hydrology to determine if it is possible to infer general rules regarding hydrochemistry from available large datasets. We combined a 2-year in-stream nitrate concentration time series (time resolution of 15 min) with concurrent hydrological, meteorological and soil moisture data. We removed the low-frequency variations through low-pass filtering, which suppressed seasonality. We then analyzed the high-frequency variability component using Pareto Density Estimation, which to our knowledge has not been applied to hydrology. The resulting distribution of nitrate concentrations revealed three normally distributed modes: low, medium and high. Studying the environmental conditions for each mode revealed the main control of nitrate concentration: the saturation state of the riparian zone. We found low nitrate concentrations under conditions of hydrological connectivity and dominant denitrifying biological processes, and we found high nitrate concentrations under hydrological recession conditions and dominant nitrifying biological processes. These results generalize our understanding of hydro-biogeochemical nitrate flux controls and bring useful information to the development of nitrogen process-based models at the landscape scale.

Ranging Behaviour of Commercial Free-Range Broiler Chickens 2: Individual Variation

PubMed Central

Groves, Peter J.; Rault, Jean-Loup

2017-01-01

Simple Summary Although the consumption of free-range chicken meat has increased, little is known about the ranging behaviour of meat chickens on commercial farms. Studies suggest range use is low and not all chickens access the range when given the opportunity. Whether ranging behaviour differs between individuals within a flock remains largely unknown and may have consequences for animal welfare and management. We monitored individual chicken ranging behaviour from four mixed sex flocks on a commercial farm across two seasons. Not all chickens accessed the range. We identified groups of chickens that differed in ranging behaviour (classified by frequency of range visits): chickens that accessed the range only once, low frequency ranging chickens and high frequency ranging chickens, the latter accounting for one-third to one half of all range visits. Sex was not predictive of whether a chicken would access the range or the number of range visits, but males spent more time on the range in winter. We found evidence that free-range chicken ranging varies between individuals within the same flock on a commercial farm. Whether such variation in ranging behaviour relates to variation in chicken welfare remains to be investigated. Abstract Little is known about broiler chicken ranging behaviour. Previous studies have monitored ranging behaviour at flock level but whether individual ranging behaviour varies within a flock is unknown. Using Radio Frequency Identification technology, we tracked 1200 individual ROSS 308 broiler chickens across four mixed sex flocks in two seasons on one commercial farm. Ranging behaviour was tracked from first day of range access (21 days of age) until 35 days of age in winter flocks and 44 days of age in summer flocks. We identified groups of chickens that differed in frequency of range visits: chickens that never accessed the range (13 to 67% of tagged chickens), low ranging chickens (15 to 44% of tagged chickens) that accounted for <15% of all range visits and included chickens that used the range only once (6 to 12% of tagged chickens), and high ranging chickens (3 to 9% of tagged chickens) that accounted for 33 to 50% of all range visits. Males spent longer on the range than females in winter (p < 0.05). Identifying the causes of inter-individual variation in ranging behaviour may help optimise ranging opportunities in free-range systems and is important to elucidate the potential welfare implications of ranging. PMID:28726735

Developing a Tactical Environment Cyber Operations Training Program

DTIC Science & Technology

2015-01-31

coagulation, flocculation, sedimentation, filtration, and disinfection is used for treatment of the water. The treated water is pumped under pres- sure into...Radio Frequency 0 Simplex and duplex 0 Tum-on time 0 Frequencies 0 Path studies and seasonal variations 0 Solar variations 0 Reliability and

Comparison effects and dielectric properties of different dose methylene-blue-doped hydrogels.

PubMed

Yalçın, O; Coşkun, R; Okutan, M; Öztürk, M

2013-08-01

The dielectric properties of methylene blue (MB)-doped hydrogels were investigated by impedance spectroscopy. The real part (ε') and the imaginary part (ε") of the complex dielectric constant and the energy loss tangent/dissipation factor (tan δ) were measured in the frequency range of 10 Hz to 100 MHz at room temperature for pH 5.5 value. Frequency variations of the resistance, the reactance, and the impedance of the samples have also been investigated. The dielectric permittivity of the MB-doped hydrogels is sensitive to ionic conduction and electrode polarization in low frequency. Furthermore, the dielectric behavior in high-frequency parts was attributed to the Brownian motion of the hydrogen bonds. The ionic conduction for MB-doped samples was prevented for Cole-Cole plots, while the Cole-Cole plots for pure sample show equivalent electrical circuit. The alternative current (ac) conductivity increases with the increasing MB concentration and the frequency.

Variation of electroencephalographic activity during non-rapid eye movement and rapid eye movement sleep with phase of circadian melatonin rhythm in humans.

PubMed Central

Dijk, D J; Shanahan, T L; Duffy, J F; Ronda, J M; Czeisler, C A

1997-01-01

1. The circadian pacemaker regulates the timing, structure and consolidation of human sleep. The extent to which this pacemaker affects electroencephalographic (EEG) activity during sleep remains unclear. 2. To investigate this, a total of 1.22 million power spectra were computed from EEGs recorded in seven men (total, 146 sleep episodes; 9 h 20 min each) who participated in a one-month-long protocol in which the sleep-wake cycle was desynchronized from the rhythm of plasma melatonin, which is driven by the circadian pacemaker. 3. In rapid eye movement (REM) sleep a small circadian variation in EEG activity was observed. The nadir of the circadian rhythm of alpha activity (8.25-10.5 Hz) coincided with the end of the interval during which plasma melatonin values were high, i.e. close to the crest of the REM sleep rhythm. 4. In non-REM sleep, variation in EEG activity between 0.25 and 11.5 Hz was primarily dependent on prior sleep time and only slightly affected by circadian phase, such that the lowest values coincided with the phase of melatonin secretion. 5. In the frequency range of sleep spindles, high-amplitude circadian rhythms with opposite phase positions relative to the melatonin rhythm were observed. Low-frequency sleep spindle activity (12.25-13.0 Hz) reached its crest and high-frequency sleep spindle activity (14.25-15.5 Hz) reached its nadir when sleep coincided with the phase of melatonin secretion. 6. These data indicate that the circadian pacemaker induces changes in EEG activity during REM and non-REM sleep. The changes in non-REM sleep EEG spectra are dissimilar from the spectral changes induced by sleep deprivation and exhibit a close temporal association with the melatonin rhythm and the endogenous circadian phase of sleep consolidation. PMID:9457658

Evidence of resonant mode coupling and the relationship between low and high frequencies in a rapidly rotating a star

DOE Office of Scientific and Technical Information (OSTI.GOV)

Breger, M.; Montgomery, M. H.

In the theory of resonant mode coupling, the parent and child modes are directly related in frequency and phase. The oscillations present in the fast rotating δ Sct star KIC 8054146 allow us to test the most general and generic aspects of such a theory. The only direct way to separate the parent and coupled (child) modes is to examine the correlations in amplitude variability between the different frequencies. For the dominant family of related frequencies, only a single mode and a triplet are the origins of nine dominant frequency peaks ranging from 2.93 to 66.30 cycles day{sup –1} (asmore » well as dozens of small-amplitude combination modes and a predicted and detected third high-frequency triplet). The mode-coupling model correctly predicts the large amplitude variations of the coupled modes as a product of the amplitudes of the parent modes, while the phase changes are also correctly modeled. This differs from the behavior of 'normal' combination frequencies in that the amplitudes are three orders of magnitude larger and may exceed even the amplitudes of the parent modes. We show that two dominant low frequencies at 5.86 and 2.93 cycles day{sup –1} in the gravity-mode region are not harmonics of each other, and their properties follow those of the almost equidistant high-frequency triplet. We note that the previously puzzling situation of finding two strong peaks in the low-frequency region related by nearly a factor of two in frequency has been seen in other δ Sct stars as well.« less

Synthesis and Characterization of High-Dielectric-Constant Nanographite-Polyurethane Composite

NASA Astrophysics Data System (ADS)

Mishra, Praveen; Bhat, Badekai Ramachandra; Bhattacharya, B.; Mehra, R. M.

2018-05-01

In the face of ever-growing demand for capacitors and energy storage devices, development of high-dielectric-constant materials is of paramount importance. Among various dielectric materials available, polymer dielectrics are preferred for their good processability. We report herein synthesis and characterization of nanographite-polyurethane composite with high dielectric constant. Nanographite showed good dispersibility in the polyurethane matrix. The thermosetting nature of polyurethane gives the composite the ability to withstand higher temperature without melting. The resultant composite was studied for its dielectric constant (ɛ) as a function of frequency. The composite exhibited logarithmic variation of ɛ from 3000 at 100 Hz to 225 at 60 kHz. The material also exhibited stable dissipation factor (tan δ) across the applied frequencies, suggesting its ability to resist current leakage.

Improved frequency/voltage converters for fast quartz crystal microbalance applications.

PubMed

Torres, R; García, J V; Arnau, A; Perrot, H; Kim, L To Thi; Gabrielli, C

2008-04-01

The monitoring of frequency changes in fast quartz crystal microbalance (QCM) applications is a real challenge in today's instrumentation. In these applications, such as ac electrogravimetry, small frequency shifts, in the order of tens of hertz, around the resonance of the sensor can occur up to a frequency modulation of 1 kHz. These frequency changes have to be monitored very accurately both in magnitude and phase. Phase-locked loop techniques can be used for obtaining a high performance frequency/voltage converter which can provide reliable measurements. Sensitivity higher than 10 mVHz, for a frequency shift resolution of 0.1 Hz, with very low distortion in tracking both the magnitude and phase of the frequency variations around the resonance frequency of the sensor are required specifications. Moreover, the resonance frequency can vary in a broad frequency range from 5 to 10 MHz in typical QCM sensors, which introduces an additional difficulty. A new frequency-voltage conversion system based on a double tuning analog-digital phase-locked loop is proposed. The reported electronic characterization and experimental results obtained with conducting polymers prove its reliability for ac-electrogravimetry measurements and, in general, for fast QCM applications.

Improved frequency/voltage converters for fast quartz crystal microbalance applications

NASA Astrophysics Data System (ADS)

Torres, R.; García, J. V.; Arnau, A.; Perrot, H.; Kim, L. To Thi; Gabrielli, C.

2008-04-01

The monitoring of frequency changes in fast quartz crystal microbalance (QCM) applications is a real challenge in today's instrumentation. In these applications, such as ac electrogravimetry, small frequency shifts, in the order of tens of hertz, around the resonance of the sensor can occur up to a frequency modulation of 1kHz. These frequency changes have to be monitored very accurately both in magnitude and phase. Phase-locked loop techniques can be used for obtaining a high performance frequency/voltage converter which can provide reliable measurements. Sensitivity higher than 10mV/Hz, for a frequency shift resolution of 0.1Hz, with very low distortion in tracking both the magnitude and phase of the frequency variations around the resonance frequency of the sensor are required specifications. Moreover, the resonance frequency can vary in a broad frequency range from 5to10MHz in typical QCM sensors, which introduces an additional difficulty. A new frequency-voltage conversion system based on a double tuning analog-digital phase-locked loop is proposed. The reported electronic characterization and experimental results obtained with conducting polymers prove its reliability for ac-electrogravimetry measurements and, in general, for fast QCM applications.

Multidecadal changes in winter circulation-climate relationship in Europe: frequency variations, within-type modifications, and long-term trends

NASA Astrophysics Data System (ADS)

Küttel, Marcel; Luterbacher, Jürg; Wanner, Heinz

2011-03-01

Using pressure fields classified by the SANDRA algorithm, this study investigates the changes in the relationship between North Atlantic/European sea level pressure (SLP) and gridded European winter (DJF) temperature and precipitation back to 1750. Important changes in the frequency of the SLP clusters are found, though none of them indicating significant long-term trends. However, for the majority of the SLP clusters a tendency toward overall warmer and partly wetter winter conditions is found, most pronounced over the last decades. This suggests important within-type variations, i.e. the temperature and precipitation fields related to a particular SLP pattern change their characteristics over time. Using a decomposition scheme we find for temperature and precipitation that within-type-related variations dominate over those due to changed frequencies of the SLP clusters: Approximately 70% (60%) of European winter temperature (precipitation) variations can be explained by within-type changes, most strongly expressed over Eastern Europe and Scandinavia. This indicates that the current European winter warming cannot be explained by changed frequencies of the SLP patterns alone, but to a larger degree by changed characteristics of the patterns themselves. Potential sources of within-type variations are discussed.

The effect of climate on acoustic signals: does atmospheric sound absorption matter for bird song and bat echolocation?

PubMed

Snell-Rood, Emilie C

2012-02-01

The divergence of signals along ecological gradients may lead to speciation. The current research tests the hypothesis that variation in sound absorption selects for divergence in acoustic signals along climatic gradients, which has implications for understanding not only diversification, but also how organisms may respond to climate change. Because sound absorption varies with temperature, humidity, and the frequency of sound, individuals or species may vary signal structure with changes in climate over space or time. In particular, signals of lower frequency, narrower bandwidth, and longer duration should be more detectable in environments with high sound absorption. Using both North American wood warblers (Parulidae) and bats of the American Southwest, this work found evidence of associations between signal structure and sound absorption. Warbler species with higher mean absorption across their range were more likely to have narrow bandwidth songs. Bat species found in higher absorption habitats were more likely to have lower frequency echolocation calls. In addition, bat species changed echolocation call structure across seasons, using longer duration, lower frequency calls in the higher absorption rainy season. These results suggest that signals may diverge along climatic gradients due to variation in sound absorption, although the effects of absorption are modest. © 2012 Acoustical Society of America

[A 35-year report of the study of group on gastrointestinal cancer in Mexico City: variations in frequency of different digestive tract neoplasms among different socioeconomic statuses].

PubMed

Villalobos Pérez, José Jesús; Bourlon, María T; Loaeza Del Castillo, Aurora; Torres Villalobos, Gonzalo

2014-01-01

Since the middle of the last century, North America and occidental countries have reported variations in the frequency of gastrointestinal neoplasms. Several environmental factors, mainly nutritional and dietary exposure, as well as habits have contributed to these changes. We have documented these changes in Mexico during the last 35 years. To define the epidemiologic changes of gastrointestinal neoplasms during the last three decades in our population. We summarized the evidence of an observational study, registering the frequency of different gastrointestinal malignancies from four institutions of socioeconomically different populations in Mexico City during 35 years. The Mexican National Academy of Medicine supported this effort. During this period, two nutritional surveys took place, letting us define the relationship between dietary changes and cancer occurrence. Replacement of gastric cancer by colorectal cancer as the leading gastrointestinal malignancy. Relationship between cancer and diet changes. Increase of esophageal adenocarcinoma in relation to epidermoid carcinoma secondary to gastroesophageal reflux and Barrett's esophagus rising incidence. Gall bladder cancer had a high frequency in one institution, probably related to genetic and racial factors. This epidemiologic data should lead us to implement sanitary measures for the prevention, early diagnosis, and appropriate treatment of gastrointestinal neoplasms.

Electromechanical systems with transient high power response operating from a resonant ac link

NASA Technical Reports Server (NTRS)

Burrows, Linda M.; Hansen, Irving G.

1992-01-01

The combination of an inherently robust asynchronous (induction) electrical machine with the rapid control of energy provided by a high frequency resonant ac link enables the efficient management of higher power levels with greater versatility. This could have a variety of applications from launch vehicles to all-electric automobiles. These types of systems utilize a machine which is operated by independent control of both the voltage and frequency. This is made possible by using an indirect field-oriented control method which allows instantaneous torque control all four operating quadrants. Incorporating the ac link allows the converter in these systems to switch at the zero crossing of every half cycle of the ac waveform. This zero loss switching of the link allows rapid energy variations to be achieved without the usual frequency proportional switching loss. Several field-oriented control systems were developed under contract to NASA.

High-frequency and time resolution rocket observations of structured low- and medium-frequency whistler mode emissions in the auroral ionosphere

NASA Astrophysics Data System (ADS)

LaBelle, J.; McAdams, K. L.; Trimpi, M. L.

High bandwidth electric field waveform measurements on a recent auroral sounding rocket reveal structured whistler mode signals at 400-800 kHz. These are observed intermittently between 300 and 500 km with spectral densities 0-10 dB above the detection threshold of 1.5×10-11V2/m2Hz. The lack of correlation with local particle measurements suggests a remote source. The signals are composed of discrete structures, in one case having bandwidths of about 10 kHz and exhibiting rapid frequency variations of the order of 200 kHz per 100 ms. In one case, emissions near the harmonic of the whistler mode signals are detected simultaneously. Current theories of auroral zone whistler mode emissions have not been applied to explain quantitatively the fine structure of these signals, which resemble auroral kilometric radiation (AKR) rather than auroral hiss.

Next generation sequencing to dissect the genetic architecture of KNG1 and F11 loci using factor XI levels as an intermediate phenotype of thrombosis.

PubMed

Martin-Fernandez, Laura; Gavidia-Bovadilla, Giovana; Corrales, Irene; Brunel, Helena; Ramírez, Lorena; López, Sonia; Souto, Juan Carlos; Vidal, Francisco; Soria, José Manuel

2017-01-01

Venous thromboembolism is a complex disease with a high heritability. There are significant associations among Factor XI (FXI) levels and SNPs in the KNG1 and F11 loci. Our aim was to identify the genetic variation of KNG1 and F11 that might account for the variability of FXI levels. The KNG1 and F11 loci were sequenced completely in 110 unrelated individuals from the GAIT-2 (Genetic Analysis of Idiopathic Thrombophilia 2) Project using Next Generation Sequencing on an Illumina MiSeq. The GAIT-2 Project is a study of 935 individuals in 35 extended Spanish families selected through a proband with idiopathic thrombophilia. Among the 110 individuals, a subset of 40 individuals was chosen as a discovery sample for identifying variants. A total of 762 genetic variants were detected. Several significant associations were established among common variants and low-frequency variants sets in KNG1 and F11 with FXI levels using the PLINK and SKAT packages. Among these associations, those of rs710446 and five low-frequency variant sets in KNG1 with FXI level variation were significant after multiple testing correction and permutation. Also, two putative pathogenic mutations related to high and low FXI levels were identified by data filtering and in silico predictions. This study of KNG1 and F11 loci should help to understand the connection between genotypic variation and variation in FXI levels. The functional genetic variants should be useful as markers of thromboembolic risk.

The Cloud Top Distribution and Diurnal Variation of Clouds Over East Asia: Preliminary Results From Advanced Himawari Imager

NASA Astrophysics Data System (ADS)

Chen, Dandan; Guo, Jianping; Wang, Hongqing; Li, Jian; Min, Min; Zhao, Wenhui; Yao, Dan

2018-04-01

Clouds, as one of the most uncertain factors in climate system, have been intensively studied as satellites with advanced instruments emerged in recent years. However, few studies examine the vertical distributions of cloud top and their temporal variations over East Asia based on geostationary satellite data. In this study, the vertical structures of cloud top and its diurnal variations in summer of 2016 are analyzed using the Advanced Himawari Imager/Himawari-8 cloud products. Results show that clouds occur most frequently over the southern Tibetan Plateau and the Bay of Bengal. We find a steep gradient of cloud occurrence frequency extending from southwest to northeast China and low-value centers over the eastern Pacific and the Inner Mongolia Plateau. The vertical structures of cloud top are highly dependent on latitude, in addition to the nonnegligible roles of both terrain and land-sea thermal contrast. In terms of the diurnal cycle, clouds tend to occur more often in the afternoon, peaking around 1700 local time over land and ocean. The amplitude of cloud diurnal variation over ocean is much smaller than that over land, and complex terrain tends to be linked to larger amplitude. In vertical, the diurnal cycle of cloud frequency exhibits bimodal pattern over both land and ocean. The high-level peaks occur at almost the same altitude over land and ocean. In contrast, the low-level peaks over ocean mainly reside in the boundary layer, much lower than those over land, which could be indicative of the frequent occurrence of marine boundary layer clouds.

Short communication: milk protein genetic variation and casein haplotype structure in the Original Pinzgauer cattle.

PubMed

Caroli, A; Rizzi, R; Lühken, G; Erhardt, G

2010-03-01

Milk protein genetic polymorphisms are often used for characterizing domesticated mammalian species and breeds, and for studying associations with economic traits. The aim of this work was to analyze milk protein genetic variation in the Original Pinzgauer, a dual-purpose (dairy and beef) cattle breed of European origin that was influenced in the past by human movements from different regions as well as by crossbreeding with Red Holstein. A total of 485 milk samples from Original Pinzgauer from Austria (n=275) and Germany (n=210) were typed at milk proteins alpha(S1)-casein, beta-casein, kappa-casein, alpha-lactalbumin, and beta-lactoglobulin by isoelectrofocusing to analyze the genetic variation affecting the protein amino acid charge. The Original Pinzgauer breed is characterized by a rather high genetic variation affecting the amino acid charge of milk proteins, with a total of 15 alleles, 12 of which were found at a frequency >0.05. The most polymorphic protein was beta-casein with 4 alleles detected. The prevalent alleles were CSN1S1*B, CSN2*A(2), CSN1S2*A, CSN3*A, LGB*A, and LAA*B. A relatively high frequency of CSN1S2*B (0.202 in the whole data set) was found, mainly occurring within the C-A(2)-B-A haplotype (in the order CSN1S1-CSN2-CSN1S2-CSN3), which seems to be peculiar to the Original Pinzgauer, possibly because the survival of an ancestral haplotype or the introgression of Bos indicus.

A Small System—High-Resolution Study of Metabolic Adaptation in the Central Metabolic Pathway to Temperate Climates in Drosophila melanogaster

PubMed Central

Lavington, Erik; Cogni, Rodrigo; Kuczynski, Caitlin; Koury, Spencer; Behrman, Emily L.; O’Brien, Katherine R.; Schmidt, Paul S.; Eanes, Walter F.

2014-01-01

In this article, we couple the geographic variation in 127 single-nucleotide polymorphism (SNP) frequencies in genes of 46 enzymes of central metabolism with their associated cis-expression variation to predict latitudinal or climatic-driven gene expression changes in the metabolic architecture of Drosophila melanogaster. Forty-two percent of the SNPs in 65% of the genes show statistically significant clines in frequency with latitude across the 20 local population samples collected from southern Florida to Ontario. A number of SNPs in the screened genes are also associated with significant expression variation within the Raleigh population from North Carolina. A principal component analysis of the full variance–covariance matrix of latitudinal changes in SNP-associated standardized gene expression allows us to identify those major genes in the pathway and its associated branches that are likely targets of natural selection. When embedded in a central metabolic context, we show that these apparent targets are concentrated in the genes of the upper glycolytic pathway and pentose shunt, those controlling glycerol shuttle activity, and finally those enzymes associated with the utilization of glutamate and pyruvate. These metabolites possess high connectivity and thus may be the points where flux balance can be best shifted. We also propose that these points are conserved points associated with coupling energy homeostasis and energy sensing in mammals. We speculate that the modulation of gene expression at specific points in central metabolism that are associated with shifting flux balance or possibly energy-state sensing plays a role in adaptation to climatic variation. PMID:24770333

Pressure ulcer image segmentation technique through synthetic frequencies generation and contrast variation using toroidal geometry.

PubMed

David, Ortiz P; Sierra-Sosa, Daniel; Zapirain, Begoña García

2017-01-06

Pressure ulcers have become subject of study in recent years due to the treatment high costs and decreased life quality from patients. These chronic wounds are related to the global life expectancy increment, being the geriatric and physical disable patients the principal affected by this condition. Injuries diagnosis and treatment usually takes weeks or even months by medical personel. Using non-invasive techniques, such as image processing techniques, it is possible to conduct an analysis from ulcers and aid in its diagnosis. This paper proposes a novel technique for image segmentation based on contrast changes by using synthetic frequencies obtained from the grayscale value available in each pixel of the image. These synthetic frequencies are calculated using the model of energy density over an electric field to describe a relation between a constant density and the image amplitude in a pixel. A toroidal geometry is used to decompose the image into different contrast levels by variating the synthetic frequencies. Then, the decomposed image is binarized applying Otsu's threshold allowing for obtaining the contours that describe the contrast variations. Morphological operations are used to obtain the desired segment of the image. The proposed technique is evaluated by synthesizing a Data Base with 51 images of pressure ulcers, provided by the Centre IGURCO. With the segmentation of these pressure ulcer images it is possible to aid in its diagnosis and treatment. To provide evidences of technique performance, digital image correlation was used as a measure, where the segments obtained using the methodology are compared with the real segments. The proposed technique is compared with two benchmarked algorithms. The results over the technique present an average correlation of 0.89 with a variation of ±0.1 and a computational time of 9.04 seconds. The methodology presents better segmentation results than the benchmarked algorithms using less computational time and without the need of an initial condition.

Detection of Propagating Fast Sausage Waves through a Detailed Analysis of a Zebra Pattern Fine Structure in a Solar Radio Burst

NASA Astrophysics Data System (ADS)

Kaneda, K.; Misawa, H.; Iwai, K.; Masuda, S.; Tsuchiya, F.; Katoh, Y.; Obara, T.

2017-12-01

Recent observations have revealed that various modes of magnetohydrodynamic (MHD) waves are ubiquitous in the corona. In imaging observations in EUV, propagating fast magnetoacoustic waves are difficult to observe due to the lack of time resolution. Quasi-periodic modulation of radio fine structures is an important source of information on these MHD waves. Zebra patterns (ZPs) are one of such fine structures in type IV bursts, which consist of several parallel stripes superimposed on the background continuum. Although the generation mechanism of ZPs has been discussed still, the most favorable model of ZPs is so-called double plasma resonance (DPR) model. In the DPR model, the frequency separation between the adjacent stripes (Δf) is determined by the plasma density and magnetic field in their source. Hence, the variation of Δf in time and frequency represents the disturbance in their source region in the corona. We report the detection of propagating fast sausage waves through the analysis of a ZP event on 2011 June 21. The variation of Δf in time and frequency was obtained using highly resolved spectral data from the Assembly of Metric-band Aperture Telescope and Real-time Analysis System (AMATERAS). We found that Δf increases with the increase of emission frequency as a whole, which is consistent with the DPR model. Furthermore, we also found that irregularities in Δf are repetitively drifting from the high frequency side to the low frequency side. Their frequency drift rate was 3 - 8 MHz/s and the repetitive frequency was several seconds. Assuming the ZP generation by the DPR model, the drifting irregularities in Δf correspond to propagating disturbances in plasma density and magnetic field with speeds of 3000 - 8000 km/s. Taking account of these facts, the observed modulations in Δf can be explained by fast sausage waves propagating through the corona. We will also discuss the plasma conditions in the corona estimated from the observational results.

Variations of Scale Height at F-Region Peak Based on Ionosonde Measurements during Solar Maximum over the Crest of Equatorial Ionization Anomaly Region

PubMed Central

Chuo, Yu-Jung

2014-01-01

Scale height is an important parameter in characterizing the shape of the ionosphere and its physical processes. In this study, we attempt to examine and discuss the variation of scale height, H m, around the F-layer peak height during high solar activity at the northern crest of the equatorial ionization anomaly (EIA) region. H m exhibits day-to-day variation and seasonal variation, with a greater average daily variation during daytime in summer. Furthermore, the diurnal variation of H m exhibits an abnormal peak at presunrise during all the seasons, particularly in winter. This increase is also observed in the F2-layer peak height for the same duration with an upward movement associated with thermospheric wind toward the equator; this upward movement increases the N2/O ratio and H m, but it causes a decrease in the F2-layer maximum critical frequency during the presunrise period. PMID:25162048

Disentangling Immediate Adaptive Introgression from Selection on Standing Introgressed Variation in Humans

PubMed Central

Jagoda, Evelyn; Lawson, Daniel J; Wall, Jeffrey D; Lambert, David; Muller, Craig; Westaway, Michael; Leavesley, Matthew; Capellini, Terence D; Mirazón Lahr, Marta; Gerbault, Pascale; Thomas, Mark G; Migliano, Andrea Bamberg; Willerslev, Eske; Metspalu, Mait; Pagani, Luca

2018-01-01

Abstract Recent studies have reported evidence suggesting that portions of contemporary human genomes introgressed from archaic hominin populations went to high frequencies due to positive selection. However, no study to date has specifically addressed the postintrogression population dynamics of these putative cases of adaptive introgression. Here, for the first time, we specifically define cases of immediate adaptive introgression (iAI) in which archaic haplotypes rose to high frequencies in humans as a result of a selective sweep that occurred shortly after the introgression event. We define these cases as distinct from instances of selection on standing introgressed variation (SI), in which an introgressed haplotype initially segregated neutrally and subsequently underwent positive selection. Using a geographically diverse data set, we report novel cases of selection on introgressed variation in living humans and shortlist among these cases those whose selective sweeps are more consistent with having been the product of iAI rather than SI. Many of these novel inferred iAI haplotypes have potential biological relevance, including three that contain immune-related genes in West Siberians, South Asians, and West Eurasians. Overall, our results suggest that iAI may not represent the full picture of positive selection on archaically introgressed haplotypes in humans and that more work needs to be done to analyze the role of SI in the archaic introgression landscape of living humans. PMID:29220488

Fourier resolved spectroscopy of 4U 1543-47 during the 2002 outburst

NASA Technical Reports Server (NTRS)

Reig, P.; Papadakis, I. E.; Shrader, C. R.; Kazanas, D.

2006-01-01

We have obtained Fourier-resolved spectra of the black-hole binary 4U 1543-47 in the canonical states (high/soft, very high, intermediate and low/hard) observed in this source during the decay of an outburst that took place in 2002. Our objective is to investigate the variability of the spectral components generally used to describe the energy spectra of black-hole systems, namely a disk component, a power-law component attributed to Comptonization by a hot corona and the contribution of the iron line due to reprocessing of the high energy (E greater than or approx, equal to 7 keV) radiation. We find that i) the disk component is not variable on time scales shorter than approx. 100 seconds, ii) the reprocessing emission as manifest by the variability of the Fe K(alpha) line responds to the primary radiation variations down to time scales of approx. 70 ms in the high and very-high states, but longer than 2 s in the low state, iii) the low-frequency QPOs are associated with variations of the X-ray power law spectral component and not to the disk component and iv) the spectra corresponding to the highest Fourier frequency are the hardest (show the flatter spectra) at a given spectral state. These results questions the models that explain the observed power spectra as due to modulations of the accretion rate only.

The low-frequency radio eclipses of the black widow pulsar J1810+1744

NASA Astrophysics Data System (ADS)

Polzin, E. J.; Breton, R. P.; Clarke, A. O.; Kondratiev, V. I.; Stappers, B. W.; Hessels, J. W. T.; Bassa, C. G.; Broderick, J. W.; Grießmeier, J.-M.; Sobey, C.; ter Veen, S.; van Leeuwen, J.; Weltevrede, P.

2018-05-01

We have observed and analysed the eclipses of the black widow pulsar J1810+1744 at low radio frequencies. Using LOw-Frequency ARray (LOFAR) and Westerbork Synthesis Radio Telescope observations between 2011 and 2015, we have measured variations in flux density, dispersion measure, and scattering around eclipses. High-time resolution, simultaneous beamformed, and interferometric imaging LOFAR observations show concurrent disappearance of pulsations and total flux from the source during the eclipses, with a 3σ upper limit of 36 mJy ( < 10 per cent of the pulsar's averaged out-of-eclipse flux density). The dispersion measure variations are highly asymmetric, suggesting a tail of material swept back due to orbital motion. The egress deviations are variable on time-scales shorter than the 3.6 h orbital period and are indicative of a clumpy medium. Additional pulse broadening detected during egress is typically < 20 per cent of the pulsar's spin period, showing no evidence of scattering the pulses beyond detectability in the beamformed data. The eclipses, lasting ˜ 13 per cent of the orbit at 149 MHz, are shown to be frequency-dependent with total duration scaling as ∝ ν-0.41 ± 0.03. The results are discussed in the context of the physical parameters of the system, and an examination of eclipse mechanisms reveals cyclotron-synchrotron absorption as the most likely primary cause, although non-linear scattering mechanisms cannot be quantitatively ruled out. The inferred mass-loss rate is a similar order of magnitude to the mean rate required to fully evaporate the companion in a Hubble time.

Corrosion and erosion monitoring in plates and pipes using constant group velocity Lamb wave inspection.

PubMed

Nagy, Peter B; Simonetti, Francesco; Instanes, Geir

2014-09-01

Recent improvements in tomographic reconstruction techniques generated a renewed interest in short-range ultrasonic guided wave inspection for real-time monitoring of internal corrosion and erosion in pipes and other plate-like structures. Emerging evidence suggests that in most cases the fundamental asymmetric A0 mode holds a distinct advantage over the earlier market leader fundamental symmetric S0 mode. Most existing A0 mode inspections operate at relatively low inspection frequencies where the mode is highly dispersive therefore very sensitive to variations in wall thickness. This paper examines the potential advantages of increasing the inspection frequency to the so-called constant group velocity (CGV) point where the group velocity remains essentially constant over a wide range of wall thickness variation, but the phase velocity is still dispersive enough to allow accurate wall thickness assessment from phase angle measurements. This paper shows that in the CGV region the crucial issue of temperature correction becomes especially simple, which is particularly beneficial when higher-order helical modes are also exploited for tomography. One disadvantage of working at such relatively high inspection frequency is that, as the slower A0 mode becomes faster and less dispersive, the competing faster S0 mode becomes slower and more dispersive. At higher inspection frequencies these modes cannot be separated any longer based on their vibration polarization only, which is mostly tangential for the S0 mode while mostly normal for the A0 at low frequencies, as the two modes become more similar as the frequency increases. Therefore, we propose a novel method for suppressing the unwanted S0 mode based on the Poisson effect of the material by optimizing the angle of inclination of the equivalent transduction force of the Electromagnetic Acoustic Transducers (EMATs) used for generation and detection purposes. Copyright © 2014 Elsevier B.V. All rights reserved.

Characteristics of cloud occurrence using ceilometer measurements and its relationship to precipitation over Seoul

NASA Astrophysics Data System (ADS)

Lee, Sanghee; Hwang, Seung-On; Kim, Jhoon; Ahn, Myoung-Hwan

2018-03-01

Clouds are an important component of the atmosphere that affects both climate and weather, however, their contributions can be very difficult to determine. Ceilometer measurements can provide high resolution information on atmospheric conditions such as cloud base height (CBH) and vertical frequency of cloud occurrence (CVF). This study presents the first comprehensive analysis of CBH and CVF derived using Vaisala CL51 ceilometers at two urban stations in Seoul, Korea, during a three-year period from January 2014 to December 2016. The average frequency of cloud occurrence detected by the ceilometers is 54.3%. It is found that the CL51 is better able to capture CBH as compared to another ceilometer CL31 at a nearby meteorological station because it could detect high clouds more accurately. Frequency distributions for CBH up to 13,000 m providing detailed vertical features with 500-m interval show 55% of CBHs below 2 km for aggregated CBHs. A bimodal frequency distribution was observed for three-layers CBHs. A monthly variation of CVF reveals that frequency concentration of lower clouds is found in summer and winter, and higher clouds more often detected in spring and autumn. Monthly distribution features of cloud occurrence and precipitation are depending on seasons and it might be easy to define their relationship due to higher degree of variability of precipitation than cloud occurrence. However, a fluctuation of cloud occurrence frequency in summer is similar to precipitation in trend, whereas clouds in winter are relatively frequent but precipitation is not accompanied. In addition, recent decrease of summer precipitation could be mostly explained by a decrease of cloud occurrence. Anomalous precipitation recorded sometimes is considerably related to corresponding cloud occurrence. The diurnal and daily variations of CBH and CVF from ceilometer observations and the analysis of microwave radiometer measurements for two typical cloudiness cases are also reviewed in parallel. This analysis in finer temporal scale exhibits that utilization of ground-based observations together could help to analyze the cloud behaviors.

Intra-Seasonal Rainfall Variations and Linkage with Kharif Crop Production: An Attempt to Evaluate Predictability of Sub-Seasonal Rainfall Events

NASA Astrophysics Data System (ADS)

Singh, Ankita; Ghosh, Kripan; Mohanty, U. C.

2018-03-01

The sub-seasonal variation of Indian summer monsoon rainfall highly impacts Kharif crop production in comparison with seasonal total rainfall. The rainfall frequency and intensity corresponding to various rainfall events are found to be highly related to crop production and therefore, the predictability of such events are considered to be diagnosed. Daily rainfall predictions are made available by one of the coupled dynamical model National Centers for Environmental Prediction Climate Forecast System (NCEPCFS). A large error in the simulation of daily rainfall sequence influences to take up a bias correction and for that reason, two approaches are used. The bias-corrected GCM is able to capture the inter-annual variability in rainfall events. Maximum prediction skill of frequency of less rainfall (LR) event is observed during the month of September and a similar result is also noticed for moderate rainfall event with maximum skill over the central parts of the country. On the other hand, the impact of rainfall weekly rainfall intensity is evaluated against the Kharif rice production. It is found that weekly rainfall intensity during July is having a significant impact on Kharif rice production, but the corresponding skill was found very low in GCM. The GCM are able to simulate the less and moderate rainfall frequency with significant skill.

A global reference for human genetic variation

PubMed Central

2016-01-01

The 1000 Genomes Project set out to provide a comprehensive description of common human genetic variation by applying whole-genome sequencing to a diverse set of individuals from multiple populations. Here we report completion of the project, having reconstructed the genomes of 2,504 individuals from 26 populations using a combination of low-coverage whole-genome sequencing, deep exome sequencing, and dense microarray genotyping. We characterized a broad spectrum of genetic variation, in total over 88 million variants (84.7 million single nucleotide polymorphisms (SNPs), 3.6 million short insertions/deletions (indels), and 60,000 structural variants), all phased onto high-quality haplotypes. This resource includes >99% of SNP variants with a frequency of >1% for a variety of ancestries. We describe the distribution of genetic variation across the global sample, and discuss the implications for common disease studies. PMID:26432245

Frequency Dependence of Helioseismic Measurements of the Center-to-Limb Effect and Flow-induced Travel-time Shifts

NASA Astrophysics Data System (ADS)

Chen, Ruizhu; Zhao, Junwei

2018-02-01

Time–distance helioseismology measures acoustic travel times to infer the structure and flow field of the solar interior; however, both the mean travel times and the travel-time shifts suffer systematic center-to-limb variations, which complicate the interpretation and inversions of the time–distance measurements. In particular, the center-to-limb variation in travel-time shifts (CtoL effect) has a significant impact on the inference of the Sun’s meridional circulation, and needs to be removed from the helioseismic measurements, although the observational properties and the physical cause of the CtoL effect have yet to be investigated. In this study, we measure the CtoL effect in the frequency domain using Doppler-velocity data from the Solar Dynamics Observatory/Helioseismic and Magnetic Imager, and study its properties as a function of disk-centric distance, travel distance, and frequency of acoustic waves. It is found that the CtoL effect has a significant frequency dependence—it reverses sign at a frequency around 5.4 mHz and reaches maximum at around 4.0 mHz before the sign reversal. The tendency of frequency dependence varies with disk-centric distance in a way that both the sign-reversal frequency and the maximum-value frequency decrease closer to the limb. The variation tendency does not change with travel distance, but the variation magnitude is approximately proportional to travel distance. For comparison, the flow-induced travel-time shifts show little frequency dependence. These observational properties provide more clues on the nature of the CtoL effect, and also possibly lead to new ways of effect-removal for a more robust determination of the deep meridional flow.

Design and status of the RF-digitizer integrated circuit

NASA Technical Reports Server (NTRS)

Rayhrer, B.; Lam, B.; Young, L. E.; Srinivasan, J. M.; Thomas, J. B.

1991-01-01

An integrated circuit currently under development samples a bandpass-limited signal at a radio frequency in quadrature and then performs a simple sum-and-dump operation in order to filter and lower the rate of the samples. Downconversion to baseband is carried out by the sampling step itself through the aliasing effect of an appropriately selected subharmonic sampling frequency. Two complete RF digitizer circuits with these functions will be implemented with analog and digital elements on one GaAs substrate. An input signal, with a carrier frequency as high as 8 GHz, can be sampled at a rate as high as 600 Msamples/sec for each quadrature component. The initial version of the chip will sign-sample (1-bit) the input RF signal. The chip will contain a synthesizer to generate a sample frequency that is a selectable integer multiple of an input reference frequency. In addition to the usual advantages of compactness and reliability associated with integrated circuits, the single chip will replace several steps required by standard analog downconversion. Furthermore, when a very high initial sample rate is selected, the presampling analog filters can be given very large bandwidths, thereby greatly reducing phase and delay instabilities typically introduced by such filters, as well as phase and delay variation due to Doppler changes.

Absolute auditory thresholds in three Old World monkey species (Cercopithecus aethiops, C. neglectus, Macaca fuscata) and humans (Homo sapiens).

PubMed

Owren, M J; Hopp, S L; Sinnott, J M; Petersen, M R

1988-06-01

We investigated the absolute auditory sensitivities of three monkey species (Cercopithecus aethiops, C. neglectus, and Macaca fuscata) and humans (Homo sapiens). Results indicated that species-typical variation exists in these primates. Vervets, which have the smallest interaural distance of the species that we tested, exhibited the greatest high-frequency sensitivity. This result is consistent with Masterton, Heffner, and Ravizza's (1969) observations that head size and high-frequency acuity are inversely correlated in mammals. Vervets were also the most sensitive in the middle frequency range. Furthermore, we found that de Brazza's monkeys, though they produce a specialized, low-pitched boom call, did not show the enhanced low-frequency sensitivity that Brown and Waser (1984) showed for blue monkeys (C. mitis), a species with a similar sound. This discrepancy may be related to differences in the acoustics of the respective habitats of these animals or in the way their boom calls are used. The acuity of Japanese monkeys was found to closely resemble that of rhesus macaques (M. mulatta) that were tested in previous studies. Finally, humans tested in the same apparatus exhibited normative sensitivities. These subjects responded more readily to low frequencies than did the monkeys but rapidly became less sensitive in the high ranges.

A compact nanosecond pulse generator for DBD tube characterization.

PubMed

Rai, S K; Dhakar, A K; Pal, U N

2018-03-01

High voltage pulses of very short duration and fast rise time are required for generating uniform and diffuse plasma under various operating conditions. Dielectric Barrier Discharge (DBD) has been generated by high voltage pulses of short duration and fast rise time to produce diffuse plasma in the discharge gap. The high voltage pulse power generators have been chosen according to the requirement for the DBD applications. In this paper, a compact solid-state unipolar pulse generator has been constructed for characterization of DBD plasma. This pulsar is designed to provide repetitive pulses of 315 ns pulse width, pulse amplitude up to 5 kV, and frequency variation up to 10 kHz. The amplitude of the output pulse depends on the dc input voltage. The output frequency has been varied by changing the trigger pulse frequency. The pulsar is capable of generating pulses of positive or negative polarity by changing the polarity of pulse transformer's secondary. Uniform and stable homogeneous dielectric barrier discharge plasma has been produced successfully in a xenon DBD tube at 400-mbar pressure using the developed high voltage pulse generator.

A compact nanosecond pulse generator for DBD tube characterization

NASA Astrophysics Data System (ADS)

Rai, S. K.; Dhakar, A. K.; Pal, U. N.

2018-03-01

High voltage pulses of very short duration and fast rise time are required for generating uniform and diffuse plasma under various operating conditions. Dielectric Barrier Discharge (DBD) has been generated by high voltage pulses of short duration and fast rise time to produce diffuse plasma in the discharge gap. The high voltage pulse power generators have been chosen according to the requirement for the DBD applications. In this paper, a compact solid-state unipolar pulse generator has been constructed for characterization of DBD plasma. This pulsar is designed to provide repetitive pulses of 315 ns pulse width, pulse amplitude up to 5 kV, and frequency variation up to 10 kHz. The amplitude of the output pulse depends on the dc input voltage. The output frequency has been varied by changing the trigger pulse frequency. The pulsar is capable of generating pulses of positive or negative polarity by changing the polarity of pulse transformer's secondary. Uniform and stable homogeneous dielectric barrier discharge plasma has been produced successfully in a xenon DBD tube at 400-mbar pressure using the developed high voltage pulse generator.

Gravitational dynamos and the low-frequency geomagnetic secular variation.

PubMed

Olson, P

2007-12-18

Self-sustaining numerical dynamos are used to infer the sources of low-frequency secular variation of the geomagnetic field. Gravitational dynamo models powered by compositional convection in an electrically conducting, rotating fluid shell exhibit several regimes of magnetic field behavior with an increasing Rayleigh number of the convection, including nearly steady dipoles, chaotic nonreversing dipoles, and chaotic reversing dipoles. The time average dipole strength and dipolarity of the magnetic field decrease, whereas the dipole variability, average dipole tilt angle, and frequency of polarity reversals increase with Rayleigh number. Chaotic gravitational dynamos have large-amplitude dipole secular variation with maximum power at frequencies corresponding to a few cycles per million years on Earth. Their external magnetic field structure, dipole statistics, low-frequency power spectra, and polarity reversal frequency are comparable to the geomagnetic field. The magnetic variability is driven by the Lorentz force and is characterized by an inverse correlation between dynamo magnetic and kinetic energy fluctuations. A constant energy dissipation theory accounts for this inverse energy correlation, which is shown to produce conditions favorable for dipole drift, polarity reversals, and excursions.

Gravitational dynamos and the low-frequency geomagnetic secular variation

PubMed Central

Olson, P.

2007-01-01

Self-sustaining numerical dynamos are used to infer the sources of low-frequency secular variation of the geomagnetic field. Gravitational dynamo models powered by compositional convection in an electrically conducting, rotating fluid shell exhibit several regimes of magnetic field behavior with an increasing Rayleigh number of the convection, including nearly steady dipoles, chaotic nonreversing dipoles, and chaotic reversing dipoles. The time average dipole strength and dipolarity of the magnetic field decrease, whereas the dipole variability, average dipole tilt angle, and frequency of polarity reversals increase with Rayleigh number. Chaotic gravitational dynamos have large-amplitude dipole secular variation with maximum power at frequencies corresponding to a few cycles per million years on Earth. Their external magnetic field structure, dipole statistics, low-frequency power spectra, and polarity reversal frequency are comparable to the geomagnetic field. The magnetic variability is driven by the Lorentz force and is characterized by an inverse correlation between dynamo magnetic and kinetic energy fluctuations. A constant energy dissipation theory accounts for this inverse energy correlation, which is shown to produce conditions favorable for dipole drift, polarity reversals, and excursions. PMID:18048345

Limit on the temporal variation of the fine-structure constant using atomic dysprosium.

PubMed

Cingöz, A; Lapierre, A; Nguyen, A-T; Leefer, N; Budker, D; Lamoreaux, S K; Torgerson, J R

2007-01-26

Over 8 months, we monitored transition frequencies between nearly degenerate, opposite-parity levels in two isotopes of atomic dysprosium (Dy). These frequencies are sensitive to variation of the fine-structure constant (alpha) due to relativistic corrections of opposite sign for the opposite-parity levels. In this unique system, in contrast to atomic-clock comparisons, the difference of the electronic energies of the opposite-parity levels can be monitored directly utilizing a rf electric-dipole transition between them. Our measurements show that the frequency variation of the 3.1-MHz transition in (163)Dy and the 235-MHz transition in (162)Dy are 9.0+/-6.7 Hz/yr and -0.6+/-6.5 Hz/yr, respectively. These results provide a rate of fractional variation of alpha of (-2.7+/-2.6) x 10(-15) yr(-1) (1 sigma) without assumptions on constancy of other fundamental constants, indicating absence of significant variation at the present level of sensitivity.

The effects of high-frequency oscillations in hippocampal electrical activities on the classification of epileptiform events using artificial neural networks

NASA Astrophysics Data System (ADS)

Chiu, Alan W. L.; Jahromi, Shokrollah S.; Khosravani, Houman; Carlen, Peter L.; Bardakjian, Berj L.

2006-03-01

The existence of hippocampal high-frequency electrical activities (greater than 100 Hz) during the progression of seizure episodes in both human and animal experimental models of epilepsy has been well documented (Bragin A, Engel J, Wilson C L, Fried I and Buzsáki G 1999 Hippocampus 9 137-42 Khosravani H, Pinnegar C R, Mitchell J R, Bardakjian B L, Federico P and Carlen P L 2005 Epilepsia 46 1-10). However, this information has not been studied between successive seizure episodes or utilized in the application of seizure classification. In this study, we examine the dynamical changes of an in vitro low Mg2+ rat hippocampal slice model of epilepsy at different frequency bands using wavelet transforms and artificial neural networks. By dividing the time-frequency spectrum of each seizure-like event (SLE) into frequency bins, we can analyze their burst-to-burst variations within individual SLEs as well as between successive SLE episodes. Wavelet energy and wavelet entropy are estimated for intracellular and extracellular electrical recordings using sufficiently high sampling rates (10 kHz). We demonstrate that the activities of high-frequency oscillations in the 100-400 Hz range increase as the slice approaches SLE onsets and in later episodes of SLEs. Utilizing the time-dependent relationship between different frequency bands, we can achieve frequency-dependent state classification. We demonstrate that activities in the frequency range 100-400 Hz are critical for the accurate classification of the different states of electrographic seizure-like episodes (containing interictal, preictal and ictal states) in brain slices undergoing recurrent spontaneous SLEs. While preictal activities can be classified with an average accuracy of 77.4 ± 6.7% utilizing the frequency spectrum in the range 0-400 Hz, we can also achieve a similar level of accuracy by using a nonlinear relationship between 100-400 Hz and <4 Hz frequency bands only.

Whole exome sequencing to estimate alloreactivity potential between donors and recipients in stem cell transplantation.

PubMed

Sampson, Juliana K; Sheth, Nihar U; Koparde, Vishal N; Scalora, Allison F; Serrano, Myrna G; Lee, Vladimir; Roberts, Catherine H; Jameson-Lee, Max; Ferreira-Gonzalez, Andrea; Manjili, Masoud H; Buck, Gregory A; Neale, Michael C; Toor, Amir A

2014-08-01

Whole exome sequencing (WES) was performed on stem cell transplant donor-recipient (D-R) pairs to determine the extent of potential antigenic variation at a molecular level. In a small cohort of D-R pairs, a high frequency of sequence variation was observed between the donor and recipient exomes independent of human leucocyte antigen (HLA) matching. Nonsynonymous, nonconservative single nucleotide polymorphisms were approximately twice as frequent in HLA-matched unrelated, compared with related D-R pairs. When mapped to individual chromosomes, these polymorphic nucleotides were uniformly distributed across the entire exome. In conclusion, WES reveals extensive nucleotide sequence variation in the exomes of HLA-matched donors and recipients. © 2014 John Wiley & Sons Ltd.

Near-surface remote sensing of spatial and temporal variation in canopy phenology

Treesearch

Andrew D. Richardson; Bobby H. Braswell; David Y. Hollinger; Julian P. Jenkins; Scott V. Ollinger

2009-01-01

There is a need to document how plant phenology is responding to global change factors, particularly warming trends. "Near-surface" remote sensing, using radiometric instruments or imaging sensors, has great potential to improve phenological monitoring because automated observations can be made at high temporal frequency. Here we build on previous work and...

Exploring Empirical Rank-Frequency Distributions Longitudinally through a Simple Stochastic Process

PubMed Central

Finley, Benjamin J.; Kilkki, Kalevi

2014-01-01

The frequent appearance of empirical rank-frequency laws, such as Zipf’s law, in a wide range of domains reinforces the importance of understanding and modeling these laws and rank-frequency distributions in general. In this spirit, we utilize a simple stochastic cascade process to simulate several empirical rank-frequency distributions longitudinally. We focus especially on limiting the process’s complexity to increase accessibility for non-experts in mathematics. The process provides a good fit for many empirical distributions because the stochastic multiplicative nature of the process leads to an often observed concave rank-frequency distribution (on a log-log scale) and the finiteness of the cascade replicates real-world finite size effects. Furthermore, we show that repeated trials of the process can roughly simulate the longitudinal variation of empirical ranks. However, we find that the empirical variation is often less that the average simulated process variation, likely due to longitudinal dependencies in the empirical datasets. Finally, we discuss the process limitations and practical applications. PMID:24755621

Exploring empirical rank-frequency distributions longitudinally through a simple stochastic process.

PubMed

Finley, Benjamin J; Kilkki, Kalevi

2014-01-01

The frequent appearance of empirical rank-frequency laws, such as Zipf's law, in a wide range of domains reinforces the importance of understanding and modeling these laws and rank-frequency distributions in general. In this spirit, we utilize a simple stochastic cascade process to simulate several empirical rank-frequency distributions longitudinally. We focus especially on limiting the process's complexity to increase accessibility for non-experts in mathematics. The process provides a good fit for many empirical distributions because the stochastic multiplicative nature of the process leads to an often observed concave rank-frequency distribution (on a log-log scale) and the finiteness of the cascade replicates real-world finite size effects. Furthermore, we show that repeated trials of the process can roughly simulate the longitudinal variation of empirical ranks. However, we find that the empirical variation is often less that the average simulated process variation, likely due to longitudinal dependencies in the empirical datasets. Finally, we discuss the process limitations and practical applications.

Factors controlling high-frequency radiation from extended ruptures

NASA Astrophysics Data System (ADS)

Beresnev, Igor A.

2017-09-01

Small-scale slip heterogeneity or variations in rupture velocity on the fault plane are often invoked to explain the high-frequency radiation from earthquakes. This view has no theoretical basis, which follows, for example, from the representation integral of elasticity, an exact solution for the radiated wave field. The Fourier transform, applied to the integral, shows that the seismic spectrum is fully controlled by that of the source time function, while the distribution of final slip and rupture acceleration/deceleration only contribute to directivity. This inference is corroborated by the precise numerical computation of the full radiated field from the representation integral. We compare calculated radiation from four finite-fault models: (1) uniform slip function with low slip velocity, (2) slip function spatially modulated by a sinusoidal function, (3) slip function spatially modulated by a sinusoidal function with random roughness added, and (4) uniform slip function with high slip velocity. The addition of "asperities," both regular and irregular, does not cause any systematic increase in the spectral level of high-frequency radiation, except for the creation of maxima due to constructive interference. On the other hand, an increase in the maximum rate of slip on the fault leads to highly amplified high frequencies, in accordance with the prediction on the basis of a simple point-source treatment of the fault. Hence, computations show that the temporal rate of slip, not the spatial heterogeneity on faults, is the predominant factor forming the high-frequency radiation and thus controlling the velocity and acceleration of the resulting ground motions.

Testing relativity with orbiting clocks

NASA Astrophysics Data System (ADS)

Nissen, J. A.; Lipa, J. A.; Wang, S.; Avaloff, D.; Stricker, D. A.

2011-02-01

We describe the background and status of a superconducting microwave clock suitable for relativity experiments in earth orbit. The project has the capability of performing improved tests of Lorentz invariance via a Michelson-Morley type experiment, and setting new limits on nine parameters in the Standard Model Extension. If flown with a high stability atomic clock, a Kennedy-Thorndike experiment along with additional tests in general relativity could be performed.In orbit, unwanted cavity frequency variations are expected to be caused mainly by acceleration effects due to residual drag and vibration, temperature variations, and fluctuations in the energy stored in the cavity. A cavity support system has been designed to reduce acceleration effects and a high resolution thermometer has been implemented to improve temperature control.

Bar Frequency & Galaxy Host Properties using the Spitzer Survey of Stellar Structure in Galaxies (S4G)

NASA Astrophysics Data System (ADS)

Sheth, Kartik; Mizusawa, T.; Kim, T.; Munoz-Mateos, J.; Regan, M. W.; de Swardt, B.; Gadotti, D.; S4G Team

2011-01-01

Using the volume limited sample of 2,331 nearby galaxies from the Spitzer Survey of Stellar Structure in Galaxies (S4G), we have classified the frequency of barred spiral galaxies. The literature abounds with frequency ranges from as low as 20% to as high as 80% but these variations are driven by the quality of the data, the sample size and the methodology of the studies. Using the 3.6 and 4.5 micron IRAC images from S4G, we are able to make a definitive measurement of the local bar fraction as a function of the galaxy host and environment. We present the results from this survey and discuss how the current bar fraction compares to the declining frequency of bars from the present day to z 1.

System stability and calibrations for hand-held electromagnetic frequency domain instruments

NASA Astrophysics Data System (ADS)

Saksa, Pauli J.; Sorsa, Joona

2017-05-01

There are a few multiple-frequency domain electromagnetic induction (EMI) hand-held rigid boom systems available for shallow geophysical resistivity investigations. They basically measure secondary field real and imaginary components after the system calibrations. One multiple-frequency system, the EMP-400 Profiler from Geophysical Survey Systems Inc., was tested for system calibrations, stability and various effects present in normal measurements like height variation, tilting, signal stacking and time stability. Results indicated that in test conditions, repeatable high-accuracy imaginary component values can be recorded for near-surface frequency soundings. In test conditions, real components are also stable but vary strongly in normal surveying measurements. However, certain calibration issues related to the combination of user influence and measurement system height were recognised as an important factor in reducing for data errors and for further processing like static offset corrections.

A role for high frequency hydrochemical sampling in long term ecosystem studies

NASA Astrophysics Data System (ADS)

Sebestyen, S. D.; Shanley, J. B.; Boyer, E. W.; Kendall, C.

2007-12-01

Monitoring of surface waters for major chemical constituents is needed to assess long-term trends and responses to ecological disturbance. However, the typical fixed-interval (weekly, monthly, or quarterly) sampling schemes of most long-term ecosystem studies may not capture the full range of stream chemical variation and do not always provide enough information to discern the landscape processes that control surface water chemistry and solute loadings. To expand upon traditional hydrochemical monitoring, we collected high frequency event-based surface water samples at an upland, forested basin of the Sleepers River Research Watershed (Vermont, USA), one of five intensively studied sites in the Water, Energy, and Biogeochemical Budgets (WEBB) program of the US Geological Survey. We present several examples that highlight the importance of linking long-term weekly data with intensive, high frequency sampling. We used end-member mixing analysis and isotopic approaches to trace sources of stream nutrients (e.g. nitrate, dissolved organic carbon) and quantified how atmospheric pollutants (e.g. nitrogen, sulfate, and mercury) affect stream chemistry. High frequency sampling generates large numbers of samples and is both labor and resource intensive but yields insights into ecosystem functions that are not readily discerned from less-frequent sampling. As the ecological community contemplates the scope and foci of environmental observatories as benchmarks for deciphering the effects of natural and anthropogenic change, incorporating high frequency hydrochemical sampling will further our understanding of ecosystem functions across a range of ecosystem types and disturbance effects.

High-frequency waves following PKP-CDIFF at distances greater than 155°

NASA Astrophysics Data System (ADS)

Nakanishi, Ichiro

1990-04-01

Using a seismic network in Hokkaido-Tohoku region, Japan we observe PKP waves in the distance range 152 to 157°from a deep earthquake in Argentina. The seismic network consists of 26 stations and provides us with a data set of dense distance sampling. The examination of amplitude variation of PKP-BC and PKP-Cdiff with distance locates the C-cusp at about 155.5° for a surface source for the path from Argentina to Japan. This C-cusp position suggests a P velocity of 10.27 km/s at the bottom of the outer core. The bandpass filtering of the data shows that high-frequency waves are observed following PKP-Cdiff at distances beyond the C-cusp. The waves are characterized by a dominant frequency of about 2 to 3 Hz, a long duration of oscillation until the arrival of PKP-AB, and an apparent onset slowness of about 4 s/deg, which is approximately equal to that of PKP-AB in the distance range. The onset time of the high-frequency waves seems to be consistent with the least time of the scattering of PKP-BC on the receiver side near the bottom of the upper mantle.

Complexity of genetic mechanisms conferring nonuniformity of recombination in maize.

PubMed

Pan, Qingchun; Deng, Min; Yan, Jianbing; Li, Lin

2017-04-26

Recombinations occur nonuniformly across the maize genome. To dissect the genetic mechanisms underlying the nonuniformity of recombination, we performed quantitative trait locus (QTL) mapping using recombinant inbred line populations. Genome-wide QTL scan identified hundreds of QTLs with both cis-prone and trans- effects for recombination number variation. To provide detailed insights into cis- factors associated with recombination variation, we examined the genomic features around recombination hot regions, including density of genes, DNA transposons, retrotransposons, and some specific motifs. Compared to recombination variation in whole genome, more QTLs were mapped for variations in recombination hot regions. The majority QTLs for recombination hot regions are trans-QTLs and co-localized with genes from the recombination pathway. We also found that recombination variation was positively associated with the presence of genes and DNA transposons, but negatively related to the presence of long terminal repeat retrotransposons. Additionally, 41 recombination hot regions were fine-mapped. The high-resolution genotyping of five randomly selected regions in two F 2 populations verified that they indeed have ultra-high recombination frequency, which is even higher than that of the well-known recombination hot regions sh1-bz and a1-sh2. Taken together, our results further our understanding of recombination variation in plants.

Characterization and comprehension of corona partial discharge in air under power frequency to very low frequency voltage

NASA Astrophysics Data System (ADS)

Yuanxiang, ZHOU; Zhongliu, ZHOU; Ling, ZHANG; Yunxiao, ZHANG; Yajun, MO; Jiantao, SUN

2018-05-01

For the partial discharge test of electrical equipment with large capacitance, the use of low-frequency voltage instead of power frequency voltage can effectively reduce the capacity requirements of test power supply. However, the validity of PD test under low frequency voltage needs to be evaluated. In order to investigate the influence of voltage frequency on corona discharge in the air, the discharge test of the tip-plate electrode under the frequency from 50 to 0.1 Hz is carried out based on the impulse current method. The results show that some of the main features of corona under low frequency do not change. The magnitude of discharge in a positive half cycle is obviously larger than that in a negative cycle. The magnitude of discharge and interval in positive cycle are random, while that in negative cycle are regular. With the decrease of frequency, the inception voltage increases. The variation trend of maximum and average magnitude and repetition rate of the discharge in positive and negative half cycle with the variation of voltage frequency and magnitude is demonstrated, with discussion and interpretation from the aspects of space charge transportation, effective discharge time and transition of discharge modes. There is an obvious difference in the phase resolved pattern of partial discharge and characteristic parameters of discharge patterns between power and low frequency. The experimental results can be the reference for mode identification of partial discharge under low frequency tests. The trend of the measured parameters with the variation of frequency provides more information about the insulation defect than traditional measurements under a single frequency (usually 50 Hz). Also it helps to understand the mechanism of corona discharge with an explanation of the characteristics under different frequencies.

Spatial variation of insecticide resistance in the dengue vector Aedes aegypti presents unique vector control challenges.

PubMed

Deming, Regan; Manrique-Saide, Pablo; Medina Barreiro, Anuar; Cardeña, Edgar Ulises Koyoc; Che-Mendoza, Azael; Jones, Bryant; Liebman, Kelly; Vizcaino, Lucrecia; Vazquez-Prokopec, Gonzalo; Lenhart, Audrey

2016-02-04

Dengue is a major public health problem in Mexico, where the use of chemical insecticides to control the principal dengue vector, Aedes aegypti, is widespread. Resistance to insecticides has been reported in multiple sites, and the frequency of kdr mutations associated with pyrethroid resistance has increased rapidly in recent years. In the present study, we characterized patterns of insecticide resistance in Ae. aegypti populations in five small towns surrounding the city of Merida, Mexico. A cross-sectional, entomological survey was performed between June and August 2013 in 250 houses in each of the five towns. Indoor resting adult mosquitoes were collected in all houses and four ovitraps were placed in each study block. CDC bottle bioassays were conducted using F0-F2 individuals reared from the ovitraps and kdr allele (Ile1016 and Cys1534) frequencies were determined. High, but varying, levels of resistance to chorpyrifos-ethyl was detected in all study towns, complete susceptibility to bendiocarb in all except one town, and variations in resistance to deltamethrin between towns, ranging from 63-88% mortality. Significant associations were detected between deltamethrin resistance and the presence of both kdr alleles. Phenotypic resistance was highly predictive of the presence of both alleles, however, not all mosquitoes containing a mutant allele were phenotypically resistant. An analysis of genotypic differentiation (exact G test) between the five towns based on the adult female Ae. aegypti collected from inside houses showed highly significant differences (p < 0.0001) between genotypes for both loci. When this was further analyzed to look for fine scale differences at the block level within towns, genotypic differentiation was significant for both loci in San Lorenzo (Ile1016, p = 0.018 and Cys1534, p = 0.007) and for Ile1016 in Acanceh (p = 0.013) and Conkal (p = 0.031). The results from this study suggest that 3 years after switching chemical groups, deltamethrin resistance and a high frequency of kdr alleles persisted in Ae. aegypti populations. The spatial variation that was detected in both resistance phenotypes and genotypes has practical implications, both for vector control operations as well as insecticide resistance management strategies.

Ground-based ELF/VLF chorus observations at subauroral latitudes—VLF-CHAIN Campaign

NASA Astrophysics Data System (ADS)

Shiokawa, Kazuo; Yokoyama, Yu; Ieda, Akimasa; Miyoshi, Yoshizumi; Nomura, Reiko; Lee, Sungeun; Sunagawa, Naoki; Miyashita, Yukinaga; Ozaki, Mitsunori; Ishizaka, Kazumasa; Yagitani, Satoshi; Kataoka, Ryuho; Tsuchiya, Fuminori; Schofield, Ian; Connors, Martin

2014-09-01

We report observations of very low frequency (VLF) and extremely low frequency (ELF) chorus waves taken during the ELF/VLF Campaign observation with High-resolution Aurora Imaging Network (VLF-CHAIN) of 17-25 February 2012 at subauroral latitudes at Athabasca (L=4.3), Canada. ELF/VLF waves were measured continuously with a sampling rate of 100 kHz to monitor daily variations in ELF/VLF emissions and derive their detailed structures. We found quasiperiodic (QP) emissions whose repetition period changes rapidly within a period of 1 h without corresponding magnetic pulsations. QP emissions showed positive correlation between amplitude and frequency sweep rate, similarly to rising-tone elements. We found an event of nearly simultaneous enhancements of QP emissions and Pc1/electromagnetic ion cyclotron wave intensities, suggesting that the temperature anisotropy of electrons and ions developed simultaneously at the equatorial plane of the magnetosphere. We also found QP emissions whose intensity suddenly increased in association with storm sudden commencement without changing their frequency. Falling-tone ELF/VLF emissions were observed with their rate of frequency change varying from 0.7 to 0.05 kHz/s over 10 min. Bursty-patch emissions in the lower and upper frequency bands are often observed during magnetically disturbed periods. Clear systematic correlation between these various ELF/VLF emissions and cosmic noise absorption was not obtained throughout the campaign period. These observations indicate several previously unknown features of ELF/VLF emissions in subauroral latitudes and demonstrate the importance of continuous measurements for monitoring temporal variations in these emissions.

F0 Characteristics of Newsreaders on Varied Emotional Texts in Tamil Language.

PubMed

Gunasekaran, Nishanthi; Boominathan, Prakash; Seethapathy, Jayashree

2017-12-26

The objective of this study was to profile speaking F 0 and its variations in newsreaders on varied emotional texts. This study has a prospective, case-control study design. Fifteen professional newsreaders and 15 non-newsreaders were the participants. The participants read the news bulletin that conveyed different emotions (shock, neutral, happy, and sad) in a habitual and "newsreading" voice. Speaking fundamental frequency (SFF) and F 0 variations were extracted from 1620 tokens using Praat software (version 5.2.32) on the opening lines, headlines, news stories, and closing lines of each news item. Paired t test, independent t test, and Friedman test were used for statistical analysis. Both male and female newsreaders had significantly (P ≤ 0.05) higher SFFs and standard deviations (SDs) of SFF in newsreading voice than speaking voice. Female non-newsreaders demonstrated significantly higher SFF and SD of SFF in newsreading voice, whereas no significant differences were noticed in the frequency parameters for male non-newsreaders. No significant difference was noted in the frequency parameters of speaking and newsreading voice between male newsreaders and male non-newsreaders. A significant difference in the SD of SFF was noticed between female newsreaders and female non-newsreaders in newsreading voice. Female newsreaders had a higher frequency range in both speaking voice and newsreading voice when compared with non-newsreaders. F 0 characteristics and frequency range determine the amount of frequency changes exercised by newsreaders while reading bulletins. This information is highly pedagogic for training voices in this profession. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

Age-Related Decline in the Variation of Dynamic Functional Connectivity: A Resting State Analysis

PubMed Central

Chen, Yuanyuan; Wang, Weiwei; Zhao, Xin; Sha, Miao; Liu, Ya’nan; Zhang, Xiong; Ma, Jianguo; Ni, Hongyan; Ming, Dong

2017-01-01

Normal aging is typically characterized by abnormal resting-state functional connectivity (FC), including decreasing connectivity within networks and increasing connectivity between networks, under the assumption that the FC over the scan time was stationary. In fact, the resting-state FC has been shown in recent years to vary over time even within minutes, thus showing the great potential of intrinsic interactions and organization of the brain. In this article, we assumed that the dynamic FC consisted of an intrinsic dynamic balance in the resting brain and was altered with increasing age. Two groups of individuals (N = 36, ages 20–25 for the young group; N = 32, ages 60–85 for the senior group) were recruited from the public data of the Nathan Kline Institute. Phase randomization was first used to examine the reliability of the dynamic FC. Next, the variation in the dynamic FC and the energy ratio of the dynamic FC fluctuations within a higher frequency band were calculated and further checked for differences between groups by non-parametric permutation tests. The results robustly showed modularization of the dynamic FC variation, which declined with aging; moreover, the FC variation of the inter-network connections, which mainly consisted of the frontal-parietal network-associated and occipital-associated connections, decreased. In addition, a higher energy ratio in the higher FC fluctuation frequency band was observed in the senior group, which indicated the frequency interactions in the FC fluctuations. These results highly supported the basis of abnormality and compensation in the aging brain and might provide new insights into both aging and relevant compensatory mechanisms. PMID:28713261

Anticounterfeiting features of artistic screening

NASA Astrophysics Data System (ADS)

Ostromoukhov, Victor; Rudaz, Nicolas; Amidror, Isaac; Emmel, Patrick; Hersch, Roger D.

1996-12-01

In a recent publication (Ostromoukhov95), a new image reproduction technique, artistic screening, was presented. It incorporates freely created artistic screen elements for generating halftones. Fixed predefined dot contours associated with given intensity levels determine the screen dot shape's growing behavior. Screen dot contours associated with each intensity level are obtained by interpolation between the fixed predefined dot contours. A user-defined mapping transforms screen elements from screen element definition space to screen element rendition space. This mapping can be tuned to produce various effects such as dilatations, contractions and non-linear deformations of the screen element grid. Although artistic screening has been designed mainly for performing the creation of graphic designs of high artistic quality, it also incorporates several important anti-counterfeiting features. For example, bank notes or other valuable printed matters produced with artistic screening may incorporate both full size and microscopic letters of varying shape into the image halftoning process. Furthermore, artistic screening can be used for generating screen dots at varying frequencies and orientations, which are well known for inducing strong moire effects when scanned by a digital color copier or a desktop scanner. However, it is less known that frequency-modulated screen dots have at each screen element size a different reproduction behavior (dot gain). When trying to reproduce an original by analog means, such as a photocopier, the variations in dot gain induce strong intensity variations at the same original intensity levels. In this paper, we present a method for compensating such variations for the target printer, on which the original security document is to be printed. Potential counterfeiters who would like to reproduce the original with a photocopying device may only be able to adjust the dot gain for the whole image and will therefore be unable to eliminate the undesired intensity variations produced by variable frequency screen elements.

A pilot investigation of the effect of extremely low frequency pulsed electromagnetic fields on humans' heart rate variability.

PubMed

Baldi, Emilio; Baldi, Claudio; Lithgow, Brian J

2007-01-01

The question whether pulsed electromagnetic field (PEMF) can affect the heart rhythm is still controversial. This study investigates the effects on the cardiocirculatory system of ELF-PEMFs. It is a follow-up to an investigation made of the possible therapeutic effect ELF-PEMFs, using a commercially available magneto therapeutic unit, had on soft tissue injury repair in humans. Modulation of heart rate (HR) or heart rate variability (HRV) can be detected from changes in periodicity of the R-R interval and/or from changes in the numbers of heart-beat/min (bpm), however, R-R interval analysis gives only a quantitative insight into HRV. A qualitative understanding of HRV can be obtained considering the power spectral density (PSD) of the R-R intervals Fourier transform. In this study PSD is the investigative tool used, more specifically the low frequency (LF) PSD and high frequency (HF) PSD ratio (LF/HF) which is an indicator of sympatho-vagal balance. To obtain the PSD value, variations of the R-R time intervals were evaluated from a continuously recorded ECG. The results show a HR variation in all the subjects when they are exposed to the same ELF-PEMF. This variation can be detected by observing the change in the sympatho-vagal equilibrium, which is an indicator of modulation of heart activity. Variation of the LF/HF PSD ratio mainly occurs at transition times from exposure to nonexposure, or vice versa. Also of interest are the results obtained during the exposure of one subject to a range of different ELF-PEMFs. This pilot study suggests that a full investigation into the effect of ELF-PEMFs on the cardiovascular system is justified.

Error correction and statistical analyses for intra-host comparisons of feline immunodeficiency virus diversity from high-throughput sequencing data.

PubMed

Liu, Yang; Chiaromonte, Francesca; Ross, Howard; Malhotra, Raunaq; Elleder, Daniel; Poss, Mary

2015-06-30

Infection with feline immunodeficiency virus (FIV) causes an immunosuppressive disease whose consequences are less severe if cats are co-infected with an attenuated FIV strain (PLV). We use virus diversity measurements, which reflect replication ability and the virus response to various conditions, to test whether diversity of virulent FIV in lymphoid tissues is altered in the presence of PLV. Our data consisted of the 3' half of the FIV genome from three tissues of animals infected with FIV alone, or with FIV and PLV, sequenced by 454 technology. Since rare variants dominate virus populations, we had to carefully distinguish sequence variation from errors due to experimental protocols and sequencing. We considered an exponential-normal convolution model used for background correction of microarray data, and modified it to formulate an error correction approach for minor allele frequencies derived from high-throughput sequencing. Similar to accounting for over-dispersion in counts, this accounts for error-inflated variability in frequencies - and quite effectively reproduces empirically observed distributions. After obtaining error-corrected minor allele frequencies, we applied ANalysis Of VAriance (ANOVA) based on a linear mixed model and found that conserved sites and transition frequencies in FIV genes differ among tissues of dual and single infected cats. Furthermore, analysis of minor allele frequencies at individual FIV genome sites revealed 242 sites significantly affected by infection status (dual vs. single) or infection status by tissue interaction. All together, our results demonstrated a decrease in FIV diversity in bone marrow in the presence of PLV. Importantly, these effects were weakened or undetectable when error correction was performed with other approaches (thresholding of minor allele frequencies; probabilistic clustering of reads). We also queried the data for cytidine deaminase activity on the viral genome, which causes an asymmetric increase in G to A substitutions, but found no evidence for this host defense strategy. Our error correction approach for minor allele frequencies (more sensitive and computationally efficient than other algorithms) and our statistical treatment of variation (ANOVA) were critical for effective use of high-throughput sequencing data in understanding viral diversity. We found that co-infection with PLV shifts FIV diversity from bone marrow to lymph node and spleen.

Transverse ion energization and low-frequency plasma waves in the mid-altitude auroral zone - A case study

NASA Technical Reports Server (NTRS)

Peterson, W. K.; Shelley, E. G.; Boardsen, S. A.; Gurnett, D. A.; Ledley, B. G.; Sugiura, M.; Moore, T. E.

1988-01-01

Evidence of transverse ion energization at altitudes of several earth radii in the auroral zone was reexamined using several hundred hours of high-sensitivity and high-resolution plasma data obtained by the Dynamics Explorer 1 satellite. The data on particle environment encountered at midaltitudes in the auroral zone disclosed rapid variations in the values of total density, thermal structure, and composition of the plasma in the interval measured; the modes of low-frequency plasma waves also varied rapidly. It was not possible to unambiguously identify in these data particle and wave signature of local transverse ion energization; however, many intervals were found where local transverse ion heating was consistent with the observations.

Dielectric Sensors Based on Electromagnetic Energy Tunneling

PubMed Central

Siddiqui, Omar; Kashanianfard, Mani; Ramahi, Omar

2015-01-01

We show that metallic wires embedded in narrow waveguide bends and channels demonstrate resonance behavior at specific frequencies. The electromagnetic energy at these resonances tunnels through the narrow waveguide channels with almost no propagation losses. Under the tunneling behavior, high-intensity electromagnetic fields are produced in the vicinity of the metallic wires. These intense field resonances can be exploited to build highly sensitive dielectric sensors. The sensor operation is explained with the help of full-wave simulations. A practical setup consisting of a 3D waveguide bend is presented to experimentally observe the tunneling phenomenon. The tunneling frequency is predicted by determining the input impedance minima through a variational formula based on the Green function of a probe-excited parallel plate waveguide. PMID:25835188

A regional peculiarity of the low-latitude lower ionosphere

NASA Astrophysics Data System (ADS)

Givishvili, G. V.; Afinogenov, Iu. A.

1985-02-01

Experiments performed with the Al method at frequencies of 2.0 and 2.8 MHz on the ship Akademik Kurchatov during March-June 1976 in the Indian Ocean (28 deg N to 18 deg S, 40-79 deg E) revealed an area (Persian Gulf, 28-24 deg N) with a highly unusual diurnal variation of the ionospheric absorption of radio waves. This peculiarity consisted in extremely small prenoon values of absorption; the difference between the prenoon values and the higher postnoon absorption values at the two frequencies used was considerably higher than the measurement error (+ or - 3 dB). It is suggested that this peculiarity was connected with anomalously high rates of recombination processes in the morning hours in the lower ionosphere in this region.

Seasonal Variations of the James Webb Space Telescope Orbital Dynamics

NASA Technical Reports Server (NTRS)

Brown, Jonathan; Peterson, Jeremy; Villac, Benjamin; Yu, Wayne

2015-01-01

LV separation state is fixed ECEF, so inertial states vary with hourly, daily, monthly, and yearly frequencies The net effect of all frequencies leads to significant variations in orbit geometry Injection states can be matched with invariant manifolds of periodic orbits in the CR3BP to explain observed final orbit.

Novel missense mutations in MYO7A underlying postlingual high- or low-frequency non-syndromic hearing impairment in two large families from China.

PubMed

Sun, Yi; Chen, Jing; Sun, Hanjun; Cheng, Jing; Li, Jianzhong; Lu, Yu; Lu, Yanping; Jin, Zhanguo; Zhu, Yuhua; Ouyang, Xiaomei; Yan, Denise; Dai, Pu; Han, Dongyi; Yang, Weiyan; Wang, Rongguang; Liu, Xuezhong; Yuan, Huijun

2011-01-01

The myosin VIIA (MYO7A) gene encodes a protein classified as an unconventional myosin. Mutations within MYO7A can lead to both syndromic and non-syndromic hearing impairment in humans. Among different mutations reported in MYO7A, only five led to non-syndromic sensorineural deafness autosomal dominant type 11 (DFNA11). Here, we present the clinical, genetic and molecular characteristics of two large Chinese DFNA11 families with either high- or low-frequency hearing loss. Affected individuals of family DX-J033 have a sloping audiogram at young ages with high frequency are most affected. With increasing age, all test frequencies are affected. Affected members of family HB-S037 present with an ascending audiogram affecting low frequencies at young ages, and then all frequencies are involved with increasing age. Genome-wide linkage analysis mapped the disease loci within the DFNA11 interval in both families. DNA sequencing of MYO7A revealed two novel nucleotide variations, c.652G > A (p.D218N) and c.2011G > A (p.G671S), in the two families. It is for the first time that the mutations identified in MYO7A in the present study are being implicated in DFNA11 in a Chinese population. For the first time, we tested electrocochleography (ECochG) in a DFNA11 family with low-frequency hearing loss. We speculate that the low-frequency sensorineural hearing loss in this DFNA11 family was not associated with endolymphatic hydrops.

Precision atomic spectroscopy for improved limits on variation of the fine structure constant and local position invariance.

PubMed

Fortier, T M; Ashby, N; Bergquist, J C; Delaney, M J; Diddams, S A; Heavner, T P; Hollberg, L; Itano, W M; Jefferts, S R; Kim, K; Levi, F; Lorini, L; Oskay, W H; Parker, T E; Shirley, J; Stalnaker, J E

2007-02-16

We report tests of local position invariance and the variation of fundamental constants from measurements of the frequency ratio of the 282-nm 199Hg+ optical clock transition to the ground state hyperfine splitting in 133Cs. Analysis of the frequency ratio of the two clocks, extending over 6 yr at NIST, is used to place a limit on its fractional variation of <5.8x10(-6) per change in normalized solar gravitational potential. The same frequency ratio is also used to obtain 20-fold improvement over previous limits on the fractional variation of the fine structure constant of |alpha/alpha|<1.3x10(-16) yr-1, assuming invariance of other fundamental constants. Comparisons of our results with those previously reported for the absolute optical frequency measurements in H and 171Yb+ vs other 133Cs standards yield a coupled constraint of -1.5x10(-15)

A preliminary investigation of finite-element modeling for composite rotor blades

NASA Technical Reports Server (NTRS)

Lake, Renee C.; Nixon, Mark W.

1988-01-01

The results from an initial phase of an in-house study aimed at improving the dynamic and aerodynamic characteristics of composite rotor blades through the use of elastic couplings are presented. Large degree of freedom shell finite element models of an extension twist coupled composite tube were developed and analyzed using MSC/NASTRAN. An analysis employing a simplified beam finite element representation of the specimen with the equivalent engineering stiffness was additionally performed. Results from the shell finite element normal modes and frequency analysis were compared to those obtained experimentally, showing an agreement within 13 percent. There was appreciable degradation in the frequency prediction for the torsional mode, which is elastically coupled. This was due to the absence of off-diagonal coupling terms in the formulation of the equivalent engineering stiffness. Parametric studies of frequency variation due to small changes in ply orientation angle and ply thickness were also performed. Results showed linear frequency variations less than 2 percent per 1 degree variation in the ply orientation angle, and 1 percent per 0.0001 inch variation in the ply thickness.

Estimation and Partitioning of Heritability in Human Populations using Whole Genome Analysis Methods

PubMed Central

Vinkhuyzen, Anna AE; Wray, Naomi R; Yang, Jian; Goddard, Michael E; Visscher, Peter M

2014-01-01

Understanding genetic variation of complex traits in human populations has moved from the quantification of the resemblance between close relatives to the dissection of genetic variation into the contributions of individual genomic loci. But major questions remain unanswered: how much phenotypic variation is genetic, how much of the genetic variation is additive and what is the joint distribution of effect size and allele frequency at causal variants? We review and compare three whole-genome analysis methods that use mixed linear models (MLM) to estimate genetic variation, using the relationship between close or distant relatives based on pedigree or SNPs. We discuss theory, estimation procedures, bias and precision of each method and review recent advances in the dissection of additive genetic variation of complex traits in human populations that are based upon the application of MLM. Using genome wide data, SNPs account for far more of the genetic variation than the highly significant SNPs associated with a trait, but they do not account for all of the genetic variance estimated by pedigree based methods. We explain possible reasons for this ‘missing’ heritability. PMID:23988118

Variability of tropical cyclone in high frequent occurrence regions over the western North Pacific

NASA Astrophysics Data System (ADS)

Yang, Yuxing; Huang, Fei; Wang, Faming

2014-06-01

In this study, three high frequent occurrence regions of tropical cyclones (TCs), i.e., the northern South China Sea (the region S), the south Philippine Sea (the region P) and the region east of Taiwan Island (the region E), are defined with frequency of TC's occurrence at each grid for a 45-year period (1965-2009), where the frequency of occurrence (FO) of TCs is triple the mean value of the whole western North Pacific. Over the region S, there are decreasing trends in the FO of TCs, the number of TCs' tracks going though this region and the number of TCs' genesis in this region. Over the region P, the FO and tracks demonstrate decadal variation with periods of 10-12 year, while over the region E, a significant 4-5 years' oscillation appears in both FO and tracks. It is demonstrated that the differences of TCs' variation in these three different regions are mainly caused by the variation of the Western Pacific Subtropical High (WPSH) at different time scales. The westward shift of WPSH is responsible for the northwesterly anomaly over the region S which inhibits westward TC movement into the region S. On the decadal timescale, the WPSH stretches northwestward because of the anomalous anticyclone over the northwestern part of the region P, and steers more TCs reaching the region P in the greater FO years of the region P. The retreating of the WPSH on the interannual time scale is the main reason for the FO's oscillation over the region E.

Anharmonic Damping of Terahertz Acoustic Waves in a Network Glass and Its Effect on the Density of Vibrational States

NASA Astrophysics Data System (ADS)

Baldi, G.; Giordano, V. M.; Ruta, B.; Dal Maschio, R.; Fontana, A.; Monaco, G.

2014-03-01

We report the observation, by means of high-resolution inelastic x-ray scattering, of an unusually large temperature dependence of the sound attenuation of a network glass at terahertz frequency, an unprecedentedly observed phenomenon. The anharmonicity can be ascribed to the interaction between the propagating acoustic wave and the bath of thermal vibrations. At low temperatures the sound attenuation follows a Rayleigh-Gans scattering law. As the temperature is increased the anharmonic process sets in, resulting in an almost quadratic frequency dependence of the damping in the entire frequency range. We show that the temperature variation of the sound damping accounts quantitatively for the temperature dependence of the density of vibrational states.

Variability and Dynamics of the Yucatan Upwelling: High-Resolution Simulations

NASA Astrophysics Data System (ADS)

Jouanno, J.; Pallàs-Sanz, E.; Sheinbaum, J.

2018-02-01

The Yucatan shelf in the southern Gulf of Mexico is under the influence of an upwelling that uplifts cool and nutrient rich waters over the continental shelf. The analysis of a set of high-resolution (Δx = Δy ≈ 2.8 km) simulations of the Gulf of Mexico shows two dominant modes of variability of the Yucatan upwelling system: (1) a low-frequency mode related to variations in position and intensity of the Loop Current along the shelf, with upwelling intensified when the Loop Current is strong and approaches to the Yucatan shelf break and (2) a high-frequency mode with peak frequency in the 6-10 days band related to wind-forced coastal waves that force vertical velocities along the eastern Yucatan shelf break. To first order, the strength and position of the Loop Current are found to control the intensity of the upwelling, but we show that high-frequency winds also contribute (˜17%) to a net input of cool waters (<22.5°C) on the Yucatan shelf. Finally, although more observational studies are needed to corroborate the topographic character of the Yucatan upwelling system, this study reveals the key role played by a notch along the Yucatan shelf break: a sensitivity simulation without the notch shows a 55% reduction of the upwelling.

Rapid spectral and flux time variations in a solar burst observed at various dm-mm wavelengths and at hard X-rays

NASA Technical Reports Server (NTRS)

Zodivaz, A. M.; Kaufmann, P.; Correia, E.; Costa, J. E. R.; Takakura, T.; Cliver, E. W.; Tapping, K. F.

1986-01-01

A solar burst was observed with high sensitivity and time resolution at cm-mm wavelengths by two different radio observatories (Itapetinga and Algonquin), with high spectral time resolution at dm-mm wavelengths by patrol instruments (Sagamore Hill), and at hard X-rays (HXM Hinotori). At the onset of the major burst time structure there was a rapid rise in the spectral turnover frequency (from 5 to 15 GHz), in about 10s, coincident to a reduction of the spectral index in the optically thin part of the spectrum. The burst maxima were not time coincident at the optically thin radio frequencies and at the different hard X-ray energy ranges. The profiles at higher radio frequencies exhibited better time coincidence to the high energy X-rays. The hardest X-ray spectrum (-3) coincided with peak radio emission at the higher frequency (44 GHz). The event appeared to be built up by a first major injection of softer particles followed by other injections of harder particles. Ultrafast time structures were identified as superimposed on the burst emission at the cm-mm high sensitivity data at X-rays, with predominant repetition rates ranging from 2.0 to 3.5 Hz.

Patterns of diel variation in nitrate concentrations in the Potomac River

USGS Publications Warehouse

Burns, Douglas A.; Miller, Matthew P.; Pellerin, Brian; Capel, Paul D.

2016-01-01

The Potomac River is a large source of N to Chesapeake Bay, where reducing nutrient loads is a focus of efforts to improve trophic status. Better understanding of NO3– loss, reflected in part by diel variation in NO3– concentrations, may refine model predictions of N loads to the Bay. We analyzed 2 y of high-frequency NO3– sensor data in the Potomac to quantify seasonal variation in the magnitude and timing of diel NO3– loss. Diel patterns were evident, especially during low flow, despite broad seasonal and flow-driven variation in NO3– concentrations. Diel variation was ~0.01 mg N/L in winter and 0.02 to 0.03 mg N/L in summer with intermediate values in spring and autumn, equivalent to <1% of the daily mean NO3– concentration in winter and ~2 to 4% in summer. Maximum diel NO3– values generally occurred in mid- to late morning, with more repeatable patterns in summer and wider variation in autumn and winter. Diel NO3– loss reduced loads by 0.7% in winter and 3% in summer. These losses were less than estimates of total in-stream NO3– load loss across the basin that averaged 33% of the annual groundwater contribution to the river. Water temperature and discharge had stronger relationships to the daily magnitude of diel NO3– variation than did photosynthetically active radiation. Estimated diel areal NO3– loss rates were generally >1000 mg N m–2 d–1, greater than most published values because measurements in this large river integrate over a greater depth/unit stream bottom area than do those from smaller rivers. These diel NO3– patterns are consistent with the influence of photoautotrophic uptake and related denitrification, but we cannot attribute these patterns to assimilation alone because the magnitude and timing of diel dynamics were affected to an unknown extent by processes, such as evapotranspiration, transient storage, and hydrodynamic dispersion. Improvements to diel loss estimates will require additional high-frequency measures, such as dissolved O2, dissolved organic N, and NH4+, and deployment of 2 measurement stations.

On the maintenance of genetic variation and adaptation to environmental change: considerations from population genomics in fishes.

PubMed

Bernatchez, L

2016-12-01

The first goal of this paper was to overview modern approaches to local adaptation, with a focus on the use of population genomics data to detect signals of natural selection in fishes. Several mechanisms are discussed that may enhance the maintenance of genetic variation and evolutionary potential, which have been overlooked and should be considered in future theoretical development and predictive models: the prevalence of soft sweeps, polygenic basis of adaptation, balancing selection and transient polymorphisms, parallel evolution, as well as epigenetic variation. Research on fish population genomics has provided ample evidence for local adaptation at the genome level. Pervasive adaptive evolution, however, seems to almost never involve the fixation of beneficial alleles. Instead, adaptation apparently proceeds most commonly by soft sweeps entailing shifts in frequencies of alleles being shared between differentially adapted populations. One obvious factor contributing to the maintenance of standing genetic variation in the face of selective pressures is that adaptive phenotypic traits are most often highly polygenic, and consequently the response to selection should derive mostly from allelic co-variances among causative loci rather than pronounced allele frequency changes. Balancing selection in its various forms may also play an important role in maintaining adaptive genetic variation and the evolutionary potential of species to cope with environmental change. A large body of literature on fishes also shows that repeated evolution of adaptive phenotypes is a ubiquitous evolutionary phenomenon that seems to occur most often via different genetic solutions, further adding to the potential options of species to cope with a changing environment. Moreover, a paradox is emerging from recent fish studies whereby populations of highly reduced effective population sizes and impoverished genetic diversity can apparently retain their adaptive potential in some circumstances. Although more empirical support is needed, several recent studies suggest that epigenetic variation could account for this apparent paradox. Therefore, epigenetic variation should be fully integrated with considerations pertaining to role of soft sweeps, polygenic and balancing selection, as well as repeated adaptation involving different genetic basis towards improving models predicting the evolutionary potential of species to cope with a changing world. © 2016 The Fisheries Society of the British Isles.

Measuring parameters of large-aperture crystals used for generating optical harmonics

DOE Office of Scientific and Technical Information (OSTI.GOV)

English, R. E.; Hibbard, R. L.; Michie, R. B.

1999-02-23

The purpose of this project was to develop tools for understanding the influence of crystal quality and crystal mounting on harmonic-generation efficiency at high irradiance. Measuring the homogeneity of crystals interferometrically, making detailed physics calculations of conversion efficiency, performing finite- element modeling of mounted crystals, and designing a new optical metrology tool were key elements in obtaining that understanding. For this work, we used the following frequency-tripling scheme: type I second- harmonic generation followed by type II sum-frequency mixing of the residual fundamental and the second harmonic light. The doubler was potassium dihydrogen phosphate (KDP), and the tripler was deuteratedmore » KDP (KD*P). With this scheme, near-infrared light (1053 nm) can be frequency tripled (to 351 nm) at high efficiency (theoretically >90%) for high irradiance (>3 GW/cm²). Spatial variations in the birefringence of the large crystals studied here (37 to 41 cm square by about 1 cm thick) imply that the ideal phase-matching orientation of the crystal with respect to the incident laser beam varies across the crystal. We have shown that phase-measuring interferometry can be used to measure these spatial variations. We observed transmitted wavefront differences between orthogonally polarized interferograms of {lambda}/50 to {lambda}/100, which correspond to index variations of order 10 -6. On some plates that we measured, the standard deviation of angular errors is 22-23 µrad; this corresponds to a 1% reduction in efficiency. Because these conversion crystals are relatively thin, their surfaces are not flat (deviate by k2.5 urn from flat). A crystal is mounted against a precision-machined surface that supports the crystal on four edges. This mounting surface is not flat either (deviates by +2.5 µm from flat). A retaining flange presses a compliant element against the crystal. The load thus applied near the edges of the crystal surface holds it in place. We performed detailed finite-element modeling to predict the resulting shape of the mounted crystal. The prediction agreed with measurements of mounted crystals. We computed the physics of the frequency-conversion process to better quantify the effects on efficiency of variation in the crystal' s axis, changes in the shape of the crystal, and mounting-induced stress. We were able to accurately predict the frequency-conversion performance of 37-cm square crystals on Beamlet, a one-beam scientific prototype of the NIF laser architecture, using interferometric measurements of the mounted crystals and the model. In a 2{omega} measurement campaign, the model predicted 64.9% conversion efficiency; 64.1% was observed. When detuned by 640 µrad, the model and measurement agreement is even better (both were 10.4%). Finally, we completed the design and initial testing of a new optical metrology tool to measure the spatial variation of frequency conversion. This system employs a high-power subaperture beam from a commercial laser oscillator and rod amplifier. The beam interrogates the crystal' s aperture by moving the crystal horizontally on a translation stage and translating the laser beam vertically on an optical periscope. Precision alignment is maintained by means of a full-aperture reference mirror, a precision-machined surface on the crystal mount, and autocollimators (the goal for angular errors is 10 µrad). The autocollimators track the mounting angle of the crystal and the direction of the laser beam with respect to the reference mirror. The conversion efficiency can be directly measured by recording l{omega}, 2{omega}, 3{omega} energy levels during the scan and by rocking (i.e., tilting) the crystal mount over an angular range.« less

Intrinsic fundamental frequency of vowels is moderated by regional dialect

PubMed Central

Jacewicz, Ewa; Fox, Robert Allen

2015-01-01

There has been a long-standing debate whether the intrinsic fundamental frequency (IF0) of vowels is an automatic consequence of articulation or whether it is independently controlled by speakers to perceptually enhance vowel contrasts along the height dimension. This paper provides evidence from regional variation in American English that IF0 difference between high and low vowels is, in part, controlled and varies across dialects. The sources of this F0 control are socio-cultural and cannot be attributed to differences in the vowel inventory size. The socially motivated enhancement was found only in prosodically prominent contexts. PMID:26520352

High-precision R-branch transition frequencies in the ν2 fundamental band of H 3+ %A Perry, Adam J.; Hodges, James N.; Markus, Charles R.; Kocheril, G. Stephen; McCall, Benjamin J.

NASA Astrophysics Data System (ADS)

Perry, Adam J.; Hodges, James N.; Markus, Charles R.; Kocheril, G. Stephen; McCall, Benjamin J.

2015-11-01

The H3+ molecular ion has served as a long-standing benchmark for state-of-the-art ab initio calculations of molecular potentials and variational calculations of rovibrational energy levels. However, the accuracy of such calculations would not have been confirmed if not for the wealth of spectroscopic data that has been made available for this molecule. Recently, a new high-precision ion spectroscopy technique was demonstrated by Hodges et al., which led to the first highly accurate and precise (∼MHz) H3+ transition frequencies. As an extension of this work, we present ten additional R-branch transitions measured to similar precision as a next step toward the ultimate goal of producing a comprehensive high-precision survey of this molecule, from which rovibrational energy levels can be calculated.

Rapid intensity and velocity variations in solar transition region lines

NASA Astrophysics Data System (ADS)

Hansteen, V. H.; Betta, R.; Carlsson, M.

2000-08-01

We have obtained short exposure (3 s) time series of strong upper chromospheric and transition region emission lines from the quiet Sun with the SUMER instrument onboard SOHO during two 1 hour periods in 1996. With a Nyqvist frequency of 167 mHz and relatively high count rates the dataset is uniquely suited for searching for high frequency variations in intensity and Doppler velocity. From Monte-Carlo experiments taking into account the photon-counting statistics we estimate our detection limit to correspond to a wave-packet of four periods coherent over 3'' with a Doppler-shift amplitude of 2.5km s-1 in the darkest internetwork areas observed in C III. In the network the detection limit is estimated to be 1.5km s-1. Above 50 mHz we detect wave-packet amplitudes above 3km s-1 less than 0.5% of the time. Between 20 and 50 mHz we detect some wave-packets with a typical duration of four periods and amplitudes up to 8km s-1. At any given internetwork location these wave-packets are present 1% of the time. In the 10-20 mHz range we see amplitudes above 3km s-1 12% of the time. At lower frequencies our dataset is consistent with other SUMER datasets reported in the literature. The chromospheric 3-7 mHz signal is discernible in the line emission. In the internetwork this is the dominant oscillation frequency but higher frequencies (7-10 mHz) are often present and appear coherent in Doppler velocity over large spatial regions (≍ 40"). Wavelet analysis implies that these oscillations have typical durations of 1000s. The network emission also shows a 5 mHz signal but is dominated by low frequency variations (of < 4 mHz) in both intensity and velocity. The oscillations show less power in intensity than in velocity. We find that while both red and blue shifted emission is observed, the transition region lines are on average red shifted between 5-10km s-1 in the network. A net red shift is also found in the internetwork emission but it is smaller (< 4km s-1). The line widths do not differ much between the internetwork and network, the non-thermal line widths increase with increasing temperature of line formation from 30km s-1 for the C II 1334 Å line to 45km s-1 for the O VI 1032 Å line. By constructing scatterplots of velocity versus intensity we find that in the network a mean redshift is correlated with a high mean intensity. In the internetwork regions we do not find any correlation between the intensity and the Doppler velocity.

Synthesis of a fiber-optic magnetostrictive sensor (FOMS) pixel for RF magnetic field imaging

NASA Astrophysics Data System (ADS)

Rengarajan, Suraj

The principal objective of this dissertation was to synthesize a sensor element with properties specifically optimized for integration into arrays capable of imaging RF magnetic fields. The dissertation problem was motivated by applications in nondestructive eddy current testing, smart skins, etc., requiring sensor elements that non-invasively detect millimeter-scale variations over several square meters, in low level magnetic fields varying at frequencies in the 100 kHz-1 GHz range. The poor spatial and temporal resolution of FOMS elements available prior to this dissertation research, precluded their use in non-invasive large area mapping applications. Prior research had been focused on large, discrete devices for detecting extremely low level magnetic fields varying at a few kHz. These devices are incompatible with array integration and imaging applications. The dissertation research sought to overcome the limitations of current technology by utilizing three new approaches; synthesizing magnetostrictive thin films and optimizing their properties for sensor applications, integrating small sensor elements into an array compatible fiber optic interferometer, and devising a RF mixing approach to measure high frequency magnetic fields using the integrated sensor element. Multilayer thin films were used to optimize the magnetic properties of the magnetostrictive elements. Alternating soft (Nisb{80}Fesb{20}) and hard (Cosb{50}Fesb{50}) magnetic alloy layers were selected for the multilayer and the layer thicknesses were varied to obtain films with a combination of large magnetization, high frequency permeability and large magnetostrictivity. X-Ray data and measurement of the variations in the magnetization, resistivity and magnetostriction with layer thicknesses, indicated that an interfacial layer was responsible for enhancing the sensing performance of the multilayers. A FOMS pixel was patterned directly onto the sensing arm of a fiber-optic interferometer, by sputtering a multilayer film with favorable sensor properties. After calibrating the interferometer response with a piezo, the mechanical and magnetic responses of the FOMS element were evaluated for various test fields. High frequency magnetic fields were detected using a local oscillator field to downconvert the RF signal fields to the lower mechanical resonant frequency of the element. A field sensitivity of 0.3 Oe/cm sensor element length was demonstrated at 1 MHz. A coherent magnetization rotation model was developed to predict the magnetostrictive response of the element, and identify approaches for optimizing its performance. This model predicts that an optimized element could resolve ˜1 mm variations in fields varying at frequencies >10 MHz with a sensitivity of ˜10sp{-3} Oe/mm. The results demonstrate the potential utility of integrating this device as a FOMS pixel in RF magnetic field imaging arrays.

Passage of Campylobacter jejuni through the chicken reservoir or mice promotes phase variation in contingency genes Cj0045 and Cj0170 that strongly associates with colonization and disease in a mouse model

PubMed Central

Kim, Joo-Sung; Artymovich, Katherine A.; Hall, David F.; Smith, Eric J.; Fulton, Richard; Bell, Julia; Dybas, Leslie; Mansfield, Linda S.; Tempelman, Robert; Wilson, David L.

2012-01-01

Human illness due to Camplyobacter jejuni infection is closely associated with consumption of poultry products. We previously demonstrated a 50 % shift in allele frequency (phase variation) in contingency gene Cj1139 (wlaN) during passage of C. jejuni NCTC11168 populations through Ross 308 broiler chickens. We hypothesized that phase variation in contingency genes during chicken passage could promote subsequent colonization and disease in humans. To test this hypothesis, we passaged C. jejuni strains NCTC11168, 33292, 81-176, KanR4 and CamR2 through broiler chickens and analysed the ability of passaged and non-passaged populations to colonize C57BL6 IL-10-deficient mice, our model for human colonization and disease. We utilized fragment analysis and nucleotide sequence analysis to measure phase variation in contingency genes. Passage through the chicken reservoir promoted phase variation in five specific contingency genes, and these ‘successful’ populations colonized mice. When phase variation did not occur in these same five contingency genes during chicken passage, these ‘unsuccessful’ populations failed to colonize mice. Phase variation during chicken passage generated small insertions or deletions (indels) in the homopolymeric tract (HT) in contingency genes. Single-colony isolates of C. jejuni strain KanR4 carrying an allele of contingency gene Cj0170 with a10G HT colonized mice at high frequency and caused disease symptoms, whereas single-colony isolates carrying the 9G allele failed to colonize mice. Supporting results were observed for the successful 9G allele of Cj0045 in strain 33292. These data suggest that phase variation in Cj0170 and Cj0045 is strongly associated with mouse colonization and disease, and that the chicken reservoir can play an active role in natural selection, phase variation and disease. PMID:22343355

Passage of Campylobacter jejuni through the chicken reservoir or mice promotes phase variation in contingency genes Cj0045 and Cj0170 that strongly associates with colonization and disease in a mouse model.

PubMed

Kim, Joo-Sung; Artymovich, Katherine A; Hall, David F; Smith, Eric J; Fulton, Richard; Bell, Julia; Dybas, Leslie; Mansfield, Linda S; Tempelman, Robert; Wilson, David L; Linz, John E

2012-05-01

Human illness due to Camplyobacter jejuni infection is closely associated with consumption of poultry products. We previously demonstrated a 50 % shift in allele frequency (phase variation) in contingency gene Cj1139 (wlaN) during passage of C. jejuni NCTC11168 populations through Ross 308 broiler chickens. We hypothesized that phase variation in contingency genes during chicken passage could promote subsequent colonization and disease in humans. To test this hypothesis, we passaged C. jejuni strains NCTC11168, 33292, 81-176, KanR4 and CamR2 through broiler chickens and analysed the ability of passaged and non-passaged populations to colonize C57BL6 IL-10-deficient mice, our model for human colonization and disease. We utilized fragment analysis and nucleotide sequence analysis to measure phase variation in contingency genes. Passage through the chicken reservoir promoted phase variation in five specific contingency genes, and these 'successful' populations colonized mice. When phase variation did not occur in these same five contingency genes during chicken passage, these 'unsuccessful' populations failed to colonize mice. Phase variation during chicken passage generated small insertions or deletions (indels) in the homopolymeric tract (HT) in contingency genes. Single-colony isolates of C. jejuni strain KanR4 carrying an allele of contingency gene Cj0170 with a10G HT colonized mice at high frequency and caused disease symptoms, whereas single-colony isolates carrying the 9G allele failed to colonize mice. Supporting results were observed for the successful 9G allele of Cj0045 in strain 33292. These data suggest that phase variation in Cj0170 and Cj0045 is strongly associated with mouse colonization and disease, and that the chicken reservoir can play an active role in natural selection, phase variation and disease.

Particle simulations of mode conversion between slow mode and fast mode in lower hybrid range of frequencies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jia, Guozhang; Xiang, Nong; Huang, Yueheng

2016-01-15

The propagation and mode conversion of lower hybrid waves in an inhomogeneous plasma are investigated by using the nonlinear δf algorithm in a two-dimensional particle-in-cell simulation code based on the gyrokinetic electron and fully kinetic ion (GeFi) scheme [Lin et al., Plasma Phys. Controlled Fusion 47, 657 (2005)]. The characteristics of the simulated waves, such as wavelength, frequency, phase, and group velocities, agree well with the linear theoretical analysis. It is shown that a significant reflection component emerges in the conversion process between the slow mode and the fast mode when the scale length of the density variation is comparablemore » to the local wavelength. The dependences of the reflection coefficient on the scale length of the density variation are compared with the results based on the linear full wave model for cold plasmas. It is indicated that the mode conversion for the waves with a frequency of 2.45 GHz (ω ∼ 3ω{sub LH}, where ω{sub LH} represents the lower hybrid resonance) and within Tokamak relevant amplitudes can be well described in the linear scheme. As the frequency decreases, the modification due to the nonlinear term becomes important. For the low-frequency waves (ω ∼ 1.3ω{sub LH}), the generations of the high harmonic modes and sidebands through nonlinear mode-mode coupling provide new power channels and thus could reduce the reflection significantly.« less

The Genetic Architecture of Adaptations to High Altitude in Ethiopia

PubMed Central

Alkorta-Aranburu, Gorka; Beall, Cynthia M.; Witonsky, David B.; Gebremedhin, Amha; Pritchard, Jonathan K.; Di Rienzo, Anna

2012-01-01

Although hypoxia is a major stress on physiological processes, several human populations have survived for millennia at high altitudes, suggesting that they have adapted to hypoxic conditions. This hypothesis was recently corroborated by studies of Tibetan highlanders, which showed that polymorphisms in candidate genes show signatures of natural selection as well as well-replicated association signals for variation in hemoglobin levels. We extended genomic analysis to two Ethiopian ethnic groups: Amhara and Oromo. For each ethnic group, we sampled low and high altitude residents, thus allowing genetic and phenotypic comparisons across altitudes and across ethnic groups. Genome-wide SNP genotype data were collected in these samples by using Illumina arrays. We find that variants associated with hemoglobin variation among Tibetans or other variants at the same loci do not influence the trait in Ethiopians. However, in the Amhara, SNP rs10803083 is associated with hemoglobin levels at genome-wide levels of significance. No significant genotype association was observed for oxygen saturation levels in either ethnic group. Approaches based on allele frequency divergence did not detect outliers in candidate hypoxia genes, but the most differentiated variants between high- and lowlanders have a clear role in pathogen defense. Interestingly, a significant excess of allele frequency divergence was consistently detected for genes involved in cell cycle control and DNA damage and repair, thus pointing to new pathways for high altitude adaptations. Finally, a comparison of CpG methylation levels between high- and lowlanders found several significant signals at individual genes in the Oromo. PMID:23236293

TEC variations over Mediteranean before and during the strong earthquake (M=6.2) of 12th October 2013 in Crete, Greece

NASA Astrophysics Data System (ADS)

Contadakis, Michael; Arabelos, Dimitrios; Vergos, Georgios; Spatalas, Spyridon

2014-05-01

In this paper the Total Electron Content (TEC) data of 9 Global Positioning System (GPS) stations of the EUREF network, which are being provided by IONOLAB (Turkey), were analysed using Discrete Fourier Analysis in order to investigate the TEC variations over Mediteranean before and during the strong earthquake of 12th of October 2013, Which occur in western of Crete, Greece. In accordance to the results of similar analysis on the occasion of earthquakes in the area (Contadakis et al 2008, 2012a,2012b) the main conclusions of this analysis are the following. (a) TEC oscillations in a broad range of frequencies occur randomly over a broad area of several hundred km from the earthquake and (b) high frequency oscillations (f ≥ 0.0003Hz, periods T ≤ 60m) seems to point to the location of the earthquake with a questionable accuracy but the fractal characteristics of the frequencies distribution, points to the locus of the earthquake with a rather higher accuracy. We conclude that the LAIC mechanism through acoustic or gravity wave could explain this phenomenology. Key words: GPS network, ionospheric total electron content, wavelet analysis References Contadakis, M.E., Arabelos, D.N. G. Asteriadis, S.D. Spatalas and Ch. Pikridas, 2008. TEC variations over the Mediterranean during the seismic activity period of the last quarter of 2005 in the area of Greece, Nat. Hazards Earth Syst. Sci., 8, 1267-1276 M.E. Contadakis, D.N. Arabelos, Ch. Pikridas and S.D. Spatalas, 2012a,TEC variations over Southern Europe before and during the M6.3 Abruzzo earthquake of 6th April 2009, Annals of Geophysics, Vol.55,1, p.83-93 M.E.Contadakis, D.N.Arabelos, and G.Vergos, 2012b, TEC variations over North-western Balkan peninsula before and during the seismic activity of 24th May 2009, EGU GA, Geoph. Res. Abs., Vol. 14, EGU2012-2319-2

Density variation effect on multi-ions with kinetic Alfven wave around cusp region—a kinetic approach

NASA Astrophysics Data System (ADS)

Tamrakar, Radha; Varma, P.; Tiwari, M. S.

2018-01-01

The kinetic Alfven waves in the presence of homogeneous magnetic field plasma with multi-ions effect are investigated. The dispersion relation and normalised damping rate are derived for low-β plasma using kinetic theory. The effect of density variation of H+, He+ and O+ ions is observed on frequency and damping rate of the wave. The variation of frequency (ω) and normalised damping rate (γ / Ω_{H^{ +}} ) of the wave are studied with respect to k_{ \\bot} ρj, where k_{ \\bot} is the perpendicular wave number, ρj is the ion gyroradius and j denotes H+, He+ and O+ ions. The variation with k_{ \\bot} ρj is considered over wide range. The parameters appropriate to cusp region are used for the explanation of results. It is found that with hydrogen and helium ions gyration, the frequency of wave is influenced by the density variation of H+ and He+ ions but remains insensitive to the change in density of O+ ions. For oxygen ion gyration, the frequency of wave varies over a short range only for O+ ion density variation. The wave shows damping at lower altitude due to variation in density of lighter H+ and He+ ions whereas at higher altitude only heavy O+ ions contribute in wave damping. The damping of wave may be due to landau damping or energy transfer from wave to particles. The present study signifies that the both lighter and heavier ions dominate differently to change the characteristics of kinetic Alfven wave and density variation is also an important parameter to understand wave phenomena in cusp region.

Ecological strategies in california chaparral: Interacting effects of soils, climate, and fire on specific leaf area

USGS Publications Warehouse

Anacker, Brian; Rajakaruna, Nishanta; Ackerly, David; Harrison, Susan; Keeley, Jon E.; Vasey, Michael

2011-01-01

Background: High values of specific leaf area (SLA) are generally associated with high maximal growth rates in resource-rich conditions, such as mesic climates and fertile soils. However, fire may complicate this relationship since its frequency varies with both climate and soil fertility, and fire frequency selects for regeneration strategies (resprouting versus seeding) that are not independent of resource-acquisition strategies. Shared ancestry is also expected to affect the distribution of resource-use and regeneration traits.Aims: We examined climate, soil, and fire as drivers of community-level variation in a key functional trait, SLA, in chaparral in California.Methods: We quantified the phylogenetic, functional, and environmental non-independence of key traits for 87 species in 115 plots.Results: Among species, SLA was higher in resprouters than seeders, although not after phylogeny correction. Among communities, mean SLA was lower in harsh interior climates, but in these climates it was higher on more fertile soils and on more recently burned sites; in mesic coastal climates, mean SLA was uniformly high despite variation in soil fertility and fire history.Conclusions: We conclude that because important correlations exist among both species traits and environmental filters, interpreting the functional and phylogenetic structure of communities may require an understanding of complex interactive effects.

Low-frequency pulse profile variation in PSR B2217+47: evidence for echoes from the interstellar medium

NASA Astrophysics Data System (ADS)

Michilli, D.; Hessels, J. W. T.; Donner, J. Y.; Grießmeier, J.-M.; Serylak, M.; Shaw, B.; Stappers, B. W.; Verbiest, J. P. W.; Deller, A. T.; Driessen, L. N.; Stinebring, D. R.; Bondonneau, L.; Geyer, M.; Hoeft, M.; Karastergiou, A.; Kramer, M.; Osłowski, S.; Pilia, M.; Sanidas, S.; Weltevrede, P.

2018-05-01

We have observed a complex and continuous change in the integrated pulse profile of PSR B2217+47, manifested as additional components trailing the main peak. These transient components are detected over 6 yr at 150 MHz using the LOw Frequency ARray (LOFAR), but they are not seen in contemporaneous Lovell observations at 1.5 GHz. We argue that propagation effects in the ionized interstellar medium (IISM) are the most likely cause. The putative structures in the IISM causing the profile variation are roughly half-way between the pulsar and the Earth and have transverse radii R ˜ 30 au. We consider different models for the structures. Under the assumption of spherical symmetry, their implied average electron density is \\overline{n}_e ˜ 100 cm-3. Since PSR B2217+47 is more than an order of magnitude brighter than the average pulsar population visible to LOFAR, similar profile variations would not have been identified in most pulsars, suggesting that subtle profile variations in low-frequency profiles might be more common than we have observed to date. Systematic studies of these variations at low frequencies can provide a new tool to investigate the proprieties of the IISM and the limits to the precision of pulsar timing.

Intra-pulse modulation recognition using short-time ramanujan Fourier transform spectrogram

NASA Astrophysics Data System (ADS)

Ma, Xiurong; Liu, Dan; Shan, Yunlong

2017-12-01

Intra-pulse modulation recognition under negative signal-to-noise ratio (SNR) environment is a research challenge. This article presents a robust algorithm for the recognition of 5 types of radar signals with large variation range in the signal parameters in low SNR using the combination of the Short-time Ramanujan Fourier transform (ST-RFT) and pseudo-Zernike moments invariant features. The ST-RFT provides the time-frequency distribution features for 5 modulations. The pseudo-Zernike moments provide invariance properties that are able to recognize different modulation schemes on different parameter variation conditions from the ST-RFT spectrograms. Simulation results demonstrate that the proposed algorithm achieves the probability of successful recognition (PSR) of over 90% when SNR is above -5 dB with large variation range in the signal parameters: carrier frequency (CF) for all considered signals, hop size (HS) for frequency shift keying (FSK) signals, and the time-bandwidth product for Linear Frequency Modulation (LFM) signals.

Resonant behavior of MHD waves on magnetic flux tubes. IV - Total resonant absorption and MHD radiating eigenmodes

NASA Technical Reports Server (NTRS)

Goossens, Marcel; Hollweg, Joseph V.

1993-01-01

Resonant absorption of MHD waves on a nonuniform flux tube is investigated as a driven problem for a 1D cylindrical equilibrium. The variation of the fractional absorption is studied as a function of the frequency and its relation to the eigenvalue problem of the MHD radiating eigenmodes of the nonuniform flux tube is established. The optimal frequencies producing maximal fractional absorption are determined and the condition for total absorption is obtained. This condition defines an impedance matching and is fulfilled for an equilibrium that is fine tuned with respect to the incoming wave. The variation of the spatial wave solutions with respect to the frequency is explained as due to the variation of the real and imaginary parts of the dispersion relation of the MHD radiating eigenmodes with respect to the real driving frequency.

Homeotic transformations and number changes in the vertebral column of Triturus newts

PubMed Central

Slijepčević, Maja; Galis, Frietson; Arntzen, Jan W.

2015-01-01

We explored intraspecific variation in vertebral formulae, more specifically the variation in the number of thoracic vertebrae and frequencies of transitional sacral vertebrae in Triturus newts (Caudata: Salamandridae). Within salamandrid salamanders this monophyletic group shows the highest disparity in the number of thoracic vertebrae and considerable intraspecific variation in the number of thoracic vertebrae. Triturus species also differ in their ecological preferences, from predominantly terrestrial to largely aquatic. Following Geoffroy St. Hilaire’s and Darwin’s rule which states that structures with a large number of serially homologous repetitive elements are more variable than structures with smaller numbers, we hypothesized that the variation in vertebral formulae increases in more elongated species with a larger number of thoracic vertebrae. We furthermore hypothesized that the frequency of transitional vertebrae will be correlated with the variation in the number of thoracic vertebrae within the species. We also investigated potential effects of species hybridization on the vertebral formula. The proportion of individuals with a number of thoracic vertebrae different from the modal number and the range of variation in number of vertebrae significantly increased in species with a larger number of thoracic vertebrae. Contrary to our expectation, the frequencies of transitional vertebrae were not correlated with frequencies of change in the complete vertebrae number. The frequency of transitional sacral vertebra in hybrids did not significantly differ from that of the parental species. Such a pattern could be a result of selection pressure against transitional vertebrae and/or a bias towards the development of full vertebrae numbers. Although our data indicate relaxed selection for vertebral count changes in more elongated, aquatic species, more data on different selective pressures in species with different numbers of vertebrae in the two contrasting, terrestrial and aquatic environments are needed to test for causality. PMID:26587355

Homeotic transformations and number changes in the vertebral column of Triturus newts.

PubMed

Slijepčević, Maja; Galis, Frietson; Arntzen, Jan W; Ivanović, Ana

2015-01-01

We explored intraspecific variation in vertebral formulae, more specifically the variation in the number of thoracic vertebrae and frequencies of transitional sacral vertebrae in Triturus newts (Caudata: Salamandridae). Within salamandrid salamanders this monophyletic group shows the highest disparity in the number of thoracic vertebrae and considerable intraspecific variation in the number of thoracic vertebrae. Triturus species also differ in their ecological preferences, from predominantly terrestrial to largely aquatic. Following Geoffroy St. Hilaire's and Darwin's rule which states that structures with a large number of serially homologous repetitive elements are more variable than structures with smaller numbers, we hypothesized that the variation in vertebral formulae increases in more elongated species with a larger number of thoracic vertebrae. We furthermore hypothesized that the frequency of transitional vertebrae will be correlated with the variation in the number of thoracic vertebrae within the species. We also investigated potential effects of species hybridization on the vertebral formula. The proportion of individuals with a number of thoracic vertebrae different from the modal number and the range of variation in number of vertebrae significantly increased in species with a larger number of thoracic vertebrae. Contrary to our expectation, the frequencies of transitional vertebrae were not correlated with frequencies of change in the complete vertebrae number. The frequency of transitional sacral vertebra in hybrids did not significantly differ from that of the parental species. Such a pattern could be a result of selection pressure against transitional vertebrae and/or a bias towards the development of full vertebrae numbers. Although our data indicate relaxed selection for vertebral count changes in more elongated, aquatic species, more data on different selective pressures in species with different numbers of vertebrae in the two contrasting, terrestrial and aquatic environments are needed to test for causality.

Properties of seismic absorption induced reflections

NASA Astrophysics Data System (ADS)

Zhao, Haixia; Gao, Jinghuai; Peng, Jigen

2018-05-01

Seismic reflections at an interface are often regarded as the variation of the acoustic impedance (product of seismic velocity and density) in a medium. In fact, they can also be generated due to the difference in absorption of the seismic energy. In this paper, we investigate the properties of such reflections. Based on the diffusive-viscous wave equation and elastic diffusive-viscous wave equation, we investigate the dependency of the reflection coefficients on frequency, and their variations with incident angles. Numerical results at a boundary due to absorption contrasts are compared with those resulted from acoustic impedance variation. It is found that, the reflection coefficients resulted from absorption depend significantly on the frequency especially at lower frequencies, but vary very slowly at small incident angles. At the higher frequencies, the reflection coefficients of diffusive-viscous wave and elastic diffusive-viscous wave are close to those of acoustic and elastic cases, respectively. On the other hand, the reflections caused by acoustic impedance variation are independent of frequency but vary distinctly with incident angles before the critical angle. We also investigate the difference between the seismograms generated in the two different media. The numerical results show that the amplitudes of these reflected waves are attenuated and their phases are shifted. However, the reflections obtained by acoustic impedance contrast, show no significant amplitude attenuation and phase shift.

Is Solar Variability Reflected in the Nile River?

NASA Technical Reports Server (NTRS)

Ruzmaikin, Alexander; Feynman, Joan; Yung, Yuk L.

2006-01-01

We investigate the possibility that solar variability influences North African climate by using annual records of the water level of the Nile collected in 622-1470 A.D. The time series of these records are nonstationary, in that the amplitudes and frequencies of the quasi-periodic variations are time-dependent. We apply the Empirical Mode Decomposition technique especially designed to deal with such time series. We identify two characteristic timescales in the records that may be linked to solar variability: a period of about 88 years and one exceeding 200 years. We show that these timescales are present in the number of auroras reported per decade in the Northern Hemisphere at the same time. The 11-year cycle is seen in the Nile's high-water level variations, but it is damped in the low-water anomalies. We suggest a possible physical link between solar variability and the low-frequency variations of the Nile water level. This link involves the influence of solar variability on the atmospheric Northern Annual Mode and on its North Atlantic Ocean and Indian Ocean patterns that affect the rainfall over the sources of the Nile in eastern equatorial Africa.

Extracting Temporal and Spatial Distributions Information about Algal Glooms Based on Multitemporal Modis

NASA Astrophysics Data System (ADS)

Chunguang, L.; Qingjiu, T.

2012-07-01

Based on MODIS remote sensing data, method and technology to extraction the time and space distribution information of algae bloom is studied and established. The dynamic feature of time and space in Taihu Lake from 2009 to 2011 can be obtained by extracted method. Variation of cyanobacterial bloom in the Taihu Lake is analyzed and discussed. The algae bloom frequency index (AFI) and algae bloom sustainability index (ASI) is important criterion which can show the interannual and inter-monthly variation in the whole area or the subregion of Taihu Lake. Utilizing the AFI and ASI from 2009 to 2011, it found some phenomena that: the booming frequency decreased from the north and west to the East and South of Taihu Lake. The annual month algae bloom variation of AFI reflect the booming existing twin peaks in the high shock level and lag trend in general. In the subregion statistics, the IBD and ASI in 2011 show the abnormal condition in the border between the Gongshan Bay and Central Lake. The date is obvious earlier than that on the same subregion in previous years and that on others subregion in the same year.

Oscillation Mode Variability in Evolved Compact Pulsators from Kepler Photometry. I. The Hot B Subdwarf Star KIC 3527751

NASA Astrophysics Data System (ADS)

Zong, Weikai; Charpinet, Stéphane; Fu, Jian-Ning; Vauclair, Gérard; Niu, Jia-Shu; Su, Jie

2018-02-01

We present the first results of an ensemble and systematic survey of oscillation mode variability in pulsating hot B subdwarf (sdB) and white dwarf stars observed with the original Kepler mission. The satellite provides uninterrupted high-quality photometric data with a time baseline that can reach up to 4 yr collected on pulsating stars. This is a unique opportunity to characterize long-term behaviors of oscillation modes. A mode modulation in amplitude and frequency can be independently inferred by its fine structure in the Fourier spectrum, from the sLSP, or with prewhitening methods applied to various parts of the light curve. We apply all these techniques to the sdB star KIC 3527751, a long-period-dominated hybrid pulsator. We find that all the detected modes with sufficiently large amplitudes to be thoroughly studied show amplitude and/or frequency variations. Components of three identified quintuplets around 92, 114, and 253 μHz show signatures that can be linked to nonlinear interactions according to the resonant mode coupling theory. This interpretation is further supported by the fact that many oscillation modes are found to have amplitudes and frequencies showing correlated or anticorrelated variations, a behavior that can be linked to the amplitude equation formalism, where nonlinear frequency corrections are determined by their amplitude variations. Our results suggest that oscillation modes varying with diverse patterns are a very common phenomenon in pulsating sdB stars. Close structures around main frequencies therefore need to be carefully interpreted in light of this finding to secure a robust identification of real eigenfrequencies, which is crucial for seismic modeling. The various modulation patterns uncovered should encourage further developments in the field of nonlinear stellar oscillation theory. It also raises a warning to any long-term project aiming at measuring the rate of period change of pulsations caused by stellar evolution, or at discovering stellar (planetary) companions around pulsating stars using timing methods, as both require very stable pulsation modes.

Dynamic blocked transfer stiffness method of characterizing the magnetic field and frequency dependent dynamic viscoelastic properties of MRE

NASA Astrophysics Data System (ADS)

Poojary, Umanath R.; Hegde, Sriharsha; Gangadharan, K. V.

2016-11-01

Magneto rheological elastomer (MRE) is a potential resilient element for the semi active vibration isolator. MRE based isolators adapt to different frequency of vibrations arising from the source to isolate the structure over wider frequency range. The performance of MRE isolator depends on the magnetic field and frequency dependent characteristics of MRE. Present study is focused on experimentally evaluating the dynamic stiffness and loss factor of MRE through dynamic blocked transfer stiffness method. The dynamic stiffness variations of MRE exhibit strong magnetic field and mild frequency dependency. Enhancements in dynamic stiffness saturate with the increase in magnetic field and the frequency. The inconsistent variations of loss factor with the magnetic field substantiate the inability of MRE to have independent control over its damping characteristics.

Low-frequency variations of unknown origin in the Kepler δ Scuti star KIC 5988140 = HD 188774

NASA Astrophysics Data System (ADS)

Lampens, P.; Tkachenko, A.; Lehmann, H.; Debosscher, J.; Aerts, C.; Beck, P. G.; Bloemen, S.; Kochiashvili, N.; Derekas, A.; Smith, J. C.; Tenenbaum, P.; Twicken, J. D.

2013-01-01

Context. The NASA exoplanet search mission Kepler is currently providing a wealth of light curves of ultra-high quality from space. Aims: We used high-quality Kepler photometry and spectroscopic data to investigate the Kepler target and binary candidate KIC 5988140. We aim to interpret the observed variations of KIC 5988140 considering three possible scenarios: binarity, co-existence of δ Sct- and γ Dor-type oscillations, and rotational modulation caused by an asymmetric surface intensity distribution. Methods: We used the spectrum synthesis method to derive the fundamental parameters Teff, log g, [M/H], and v sin i from the newly obtained high-resolution, high S/N spectra. Frequency analyses of both the photometric and the spectroscopic data were performed. Results: The star has a spectral type of A7.5 IV-III and a metallicity slightly lower than that of the Sun. Both Fourier analyses reveal the same two dominant frequencies F1 = 2F2 = 0.688 and F2 = 0.344 d-1. We also detected in the photometry the signal of nine more, significant frequencies located in the typical range of δ Sct pulsation. The light and radial velocity curves follow a similar, stable double-wave pattern which are not exactly in anti-phase but show a relative phase shift of about 0.1 period between the moment of minimum velocity and that of maximum light. Conclusions: Such findings are incompatible with the star being a binary system. We next show that, for all possible (limit) configurations of a spotted surface, the predicted light-to-velocity amplitude ratio is almost two orders larger than the observed value, which pleads against rotational modulation. The same argument also invalidates the explanation in terms of pulsations of type γ Dor (i.e. hybrid pulsations). We confirm the occurrence of various independent δ Sct-type pressure modes in the Kepler light curve. With respect to the low-frequency content, however, we argue that the physical cause of the remaining light and radial velocity variations of this late A-type star remains unexplained by any of the presently considered scenarios. Based on data gathered with NASA's Discovery mission Kepler and with the Hermes spectrograph, installed at the Mercator Telescope, operated on the island of La Palma by the Flemish Community, at the Spanish Observatorio del Roque de los Muchachos of the Instituto de Astrofísica de Canarias, and with the 2-m Alfred-Jensch telescope of the Thüringer Landessternwarte Tautenburg.Reduced spectra are only available at the CDS via anonymous ftp to cdsarc.u-strasbg.fr (130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/549/A104

KIC 9533489: a genuine γ Doradus - δ Scuti Kepler hybrid pulsator with transit events

NASA Astrophysics Data System (ADS)

Bognár, Zs.; Lampens, P.; Frémat, Y.; Southworth, J.; Sódor, Á.; De Cat, P.; Isaacson, H. T.; Marcy, G. W.; Ciardi, D. R.; Gilliland, R. L.; Martín-Fernández, P.

2015-09-01

Context. Several hundred candidate hybrid pulsators of type A-F have been identified from space-based observations. Their large number allows both statistical analyses and detailed investigations of individual stars. This offers the opportunity to study the full interior of the genuine hybrids, in which both low radial order p- and high-order g-modes are self-excited at the same time. However, a few other physical processes can also be responsible for the observed hybrid nature, related to binarity or to surface inhomogeneities. The finding that most δ Scuti stars also show long-period light variations represents a real challenge for theory. Aims: We aim at determining the pulsation frequencies of KIC 9533489, to search for regular patterns and spacings among them, and to investigate the stability of the frequencies and the amplitudes. An additional goal is to study the serendipitously detected transit events: is KIC 9533489 the host star? What are the limitations on the physical parameters of the involved bodies? Methods: We performed a Fourier analysis of all the available Kepler light curves. We investigated the frequency and period spacings and determined the stellar physical parameters from spectroscopic observations. We also modelled the transit events. Results: The Fourier analysis of the Kepler light curves revealed 55 significant frequencies clustered into two groups, which are separated by a gap between 15 and 27 d-1. The light variations are dominated by the beating of two dominant frequencies located at around 4 d-1. The amplitudes of these two frequencies show a monotonic long-term trend. The frequency spacing analysis revealed two possibilities: the pulsator is either a highly inclined moderate rotator (v ≈ 70 km s-1, i> 70°) or a fast rotator (v ≈ 200 km s-1) with i ≈ 20°. The transit analysis disclosed that the transit events that occur with a ≈197 d period may be caused by a 1.6 RJup body orbiting a fainter star, which would be spatially coincident with KIC 9533489.

Final Scientific/Technical Report for Subseasonal to Seasonal Prediction of Extratropical Storm Track Activity over the U.S. using NMME data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chang, Edmund Kar-Man

The goals of the project are: 1) To develop and assess subseasonal to seasonal prediction products for storm track activity derived from NMME data; 2) Assess how much of the predictable signal can be associated with ENSO and other modes of large scale low frequency atmosphere-ocean variability; and 3) Further explore the link between storm track variations and extreme weather statistics. Significant findings of this project include the followings: 1) Our assessment of NMME reforecasts of storm track variability has demonstrated that NMME models have substantial skill in predicting storm track activity in the vicinity of North America - Subseasonalmore » skill is high only for leads of less than 1 month. However, seasonal (winter) prediction skill near North America is high even out to 4 to 5 months lead - Much of the skill for leads of 1 month or longer is related to the influence of ENSO - Nevertheless, lead 0 NMME predictions are significantly more skillful than those based on ENSO influence 2) Our results have demonstrated that storm track variations highly modulate the frequency of occurrence of weather extremes - Extreme cold, high wind, and extreme precipitation events in winter - Extreme heat events in summer - These results suggest that NMME storm track predictions can be developed to serve as a useful guidance to assist the formulation of monthly/seasonal outlooks« less

Interspecific variation of warning calls in piranhas: a comparative analysis.

PubMed

Mélotte, Geoffrey; Vigouroux, Régis; Michel, Christian; Parmentier, Eric

2016-10-26

Fish sounds are known to be species-specific, possessing unique temporal and spectral features. We have recorded and compared sounds in eight piranha species to evaluate the potential role of acoustic communication as a driving force in clade diversification. All piranha species showed the same kind of sound-producing mechanism: sonic muscles originate on vertebrae and attach to a tendon surrounding the bladder ventrally. Contractions of the sound-producing muscles force swimbladder vibration and dictate the fundamental frequency. It results the calling features of the eight piranha species logically share many common characteristics. In all the species, the calls are harmonic sounds composed of multiple continuous cycles. However, the sounds of Serrasalmus elongatus (higher number of cycles and high fundamental frequency) and S. manueli (long cycle periods and low fundamental frequency) are clearly distinguishable from the other species. The sonic mechanism being largely conserved throughout piranha evolution, acoustic communication can hardly be considered as the main driving force in the diversification process. However, sounds of some species are clearly distinguishable despite the short space for variations supporting the need for specific communication. Behavioural studies are needed to clearly understand the eventual role of the calls during spawning events.

Terahertz wave techniques using a metal mesh for evaluating the components of the stratum corneum.

PubMed

Mizukoshi, Koji; Yonekura, Kazuki; Ogura, Hidehiro; Guan, Yu; Kawase, Kodo

2013-02-01

Terahertz waves are located in the region of the spectrum between milliwaves and infrared. We analyzed the feasibility of terahertz spectroscopy to inspect the compositional variations of the stratum corneum (SC). We used a terahertz time-domain spectroscopy system with the metal mesh technique. To investigate whether terahertz can inspect compositional variation of SC, we measured the terahertz frequency spectra of the SC sheet that was treated with chloroform-methanol, lipid mixture, a denaturation agent, and heating with hot air. The chloroform-methanol treatment of the SC shifted the dip position, which represents a convex downward shape of the spectra, to a higher frequency. This dip shift was reversed to an untreated position by the dose-dependent application of a lipid mixture. The heating treatment of the SC shifted the dip position to a higher frequency. The same dip shift was also induced by the application of a denaturation agent to the SC. The technique using terahertz waves with a metal mesh is effective because of its simplicity and its high degree of accuracy in detecting the amount of lipid and the protein conformation state. © 2012 John Wiley & Sons A/S.

Diurnal Variation of Tropical Ice Cloud Microphysics: Evidence from Global Precipitation Measurement Microwave Imager Polarimetric Measurements

NASA Astrophysics Data System (ADS)

Gong, Jie; Zeng, Xiping; Wu, Dong L.; Li, Xiaowen

2018-01-01

The diurnal variation of tropical ice clouds has been well observed and examined in terms of the occurring frequency and total mass but rarely from the viewpoint of ice microphysical parameters. It accounts for a large portion of uncertainties in evaluating ice clouds' role on global radiation and hydrological budgets. Owing to the advantage of precession orbit design and paired polarized observations at a high-frequency microwave band that is particularly sensitive to ice particle microphysical properties, 3 years of polarimetric difference (PD) measurements using the 166 GHz channel of Global Precipitation Measurement Microwave Imager (GPM-GMI) are compiled to reveal a strong diurnal cycle over tropical land (30°S-30°N) with peak amplitude varying up to 38%. Since the PD signal is dominantly determined by ice crystal size, shape, and orientation, the diurnal cycle observed by GMI can be used to infer changes in ice crystal properties. Moreover, PD change is found to lead the diurnal changes of ice cloud occurring frequency and total ice mass by about 2 h, which strongly implies that understanding ice microphysics is critical to predict, infer, and model ice cloud evolution and precipitation processes.

Interspecific variation of warning calls in piranhas: a comparative analysis

PubMed Central

Mélotte, Geoffrey; Vigouroux, Régis; Michel, Christian; Parmentier, Eric

2016-01-01

Fish sounds are known to be species-specific, possessing unique temporal and spectral features. We have recorded and compared sounds in eight piranha species to evaluate the potential role of acoustic communication as a driving force in clade diversification. All piranha species showed the same kind of sound-producing mechanism: sonic muscles originate on vertebrae and attach to a tendon surrounding the bladder ventrally. Contractions of the sound-producing muscles force swimbladder vibration and dictate the fundamental frequency. It results the calling features of the eight piranha species logically share many common characteristics. In all the species, the calls are harmonic sounds composed of multiple continuous cycles. However, the sounds of Serrasalmus elongatus (higher number of cycles and high fundamental frequency) and S. manueli (long cycle periods and low fundamental frequency) are clearly distinguishable from the other species. The sonic mechanism being largely conserved throughout piranha evolution, acoustic communication can hardly be considered as the main driving force in the diversification process. However, sounds of some species are clearly distinguishable despite the short space for variations supporting the need for specific communication. Behavioural studies are needed to clearly understand the eventual role of the calls during spawning events. PMID:27782184

Multiferroic properties of microwave sintered PbFe12-xO19-δ

NASA Astrophysics Data System (ADS)

Prathap, S.; Madhuri, W.

2017-05-01

The effect of iron deficiency on the structural, electrical, ferroelectric and magnetic properties of nano PbFe12-xO19-δ (where x=0.0, 0.25, 0.50, 0.75, 1.0) hexaferrites prepared by sol-gel auto combustion and processed by microwaves are investigated. X-ray analysis confirms single phase magneto-plumbite phase formation. The surface morphology is studied from Field Emission Scanning Electron Microscope. Further, optical properties are investigated using Fourier Transform Infrared spectra and UV-visible spectra. AC electrical conductivity is estimated as a function of temperature and frequency in the range of room temperature (RT) to 500 °C and 100 Hz to 5MHz. AC electrical conduction analysis shows that conduction is mainly due to small polaron hopping mechanism. The variation of polarization with applied electric field exhibits hysteresis loop confirming the ferroelectric nature. The initial permeability studies with varying temperature reveals that the Curie transition temperature for the present series is around 400 °C. Variation of initial permeability with frequency ranging from 100 to 5 MHz shows a constant value (except for x=0.0) opening avenues for high frequency applications.

Modeling of power control schemes in induction cooking devices

NASA Astrophysics Data System (ADS)

Beato, Alessio; Conti, Massimo; Turchetti, Claudio; Orcioni, Simone

2005-06-01

In recent years, with remarkable advancements of power semiconductor devices and electronic control systems, it becomes possible to apply the induction heating technique for domestic use. In order to achieve the supply power required by these devices, high-frequency resonant inverters are used: the force commutated, half-bridge series resonant converter is well suited for induction cooking since it offers an appropriate balance between complexity and performances. Power control is a key issue to attain efficient and reliable products. This paper describes and compares four power control schemes applied to the half-bridge series resonant inverter. The pulse frequency modulation is the most common control scheme: according to this strategy, the output power is regulated by varying the switching frequency of the inverter circuit. Other considered methods, originally developed for induction heating industrial applications, are: pulse amplitude modulation, asymmetrical duty cycle and pulse density modulation which are respectively based on variation of the amplitude of the input supply voltage, on variation of the duty cycle of the switching signals and on variation of the number of switching pulses. Each description is provided with a detailed mathematical analysis; an analytical model, built to simulate the circuit topology, is implemented in the Matlab environment in order to obtain the steady-state values and waveforms of currents and voltages. For purposes of this study, switches and all reactive components are modelled as ideal and the "heating-coil/pan" system is represented by an equivalent circuit made up of a series connected resistance and inductance.

Temporal and spatial variations in sand and dust storm events in East Asia from 2007 to 2016: Relationships with surface conditions and climate change.

PubMed

An, Linchang; Che, Huizheng; Xue, Min; Zhang, Tianhang; Wang, Hong; Wang, Yaqiang; Zhou, Chunhong; Zhao, Hujia; Gui, Ke; Zheng, Yu; Sun, Tianze; Liang, Yuanxin; Sun, Enwei; Zhang, Hengde; Zhang, Xiaoye

2018-08-15

We analyzed the frequency and intensity of sand and dust storms (SDSs) in East Asia from 2007 to 2016 using observational data from ground stations, numerical modeling, and vegetation indices obtained from both satellite and reanalysis data. The relationships of SDSs with surface conditions and the synoptic circulation pattern were also analyzed. The statistical analyses demonstrated that the number and intensity of SDS events recorded in spring during 2007 to 2016 showed a decreasing trend. The total number of spring SDSs decreased from at least ten events per year before 2011 to less than ten events per year after 2011. The overall average annual variation of the surface dust concentration in the main dust source regions decreased 33.24μg/m 3 (-1.75%) annually. The variation in the temperatures near and below the ground surface and the amount of precipitation and soil moisture all favored an improvement in vegetation coverage, which reduced the intensity and frequency of SDSs. The strong winds accompanying the influx of cold air from high latitudes showed a decreasing trend, leading to a decrease in the number of SDSs and playing a key role in the decadal decrease of SDSs. The decrease in the intensity of the polar vortex during study period was closely related to the decrease in the intensity and frequency of SDSs. Copyright © 2018 Elsevier B.V. All rights reserved.

The network construction of CSELF for earthquake monitoring and its preliminary observation

NASA Astrophysics Data System (ADS)

Tang, J.; Zhao, G.; Chen, X.; Bing, H.; Wang, L.; Zhan, Y.; Xiao, Q.; Dong, Z.

2017-12-01

The Electromagnetic (EM) anomaly in short-term earthquake precursory is most sensitive physical phenomena. Scientists believe that EM monitoring for earthquake is one of the most promising means of forecasting. However, existing ground-base EM observation confronted with increasing impact cultural noises, and the lack of a frequency range of higher than 1Hz observations. Control source of extremely low frequency (CSELF) EM is a kind of good prospective new approach. It not only has many advantages with high S/N ratio, large coverage area, probing depth ect., thereby facilitating the identification and capture anomaly signal, and it also can be used to study the electromagnetic field variation and to study the crustal medium changes of the electric structure.The first CSELF EM network for earthquake precursory monitoring with 30 observatories in China has been constructed. The observatories distribute in Beijing surrounding area and in the southern part of North-South Seismic Zone. GMS-07 system made by Metronix is equipped at each station. The observation mixed CSELF and nature source, that is, if during the control source is off transmitted, the nature source EM signal will be recorded. In genernal, there are 3 5 frequencies signals in the 0.1-300Hz frequency band will be transmit in every morning and evening in a fixed time (length 2 hours). Besides time, natural field to extend the frequency band (0.001 1000 Hz) will be observed by using 3 sample frequencies, 4096Hz sampling rate for HF, 256Hz for MF and 16Hz for LF. The low frequency band records continuously all-day and the high and medium frequency band use a slices record, the data records by cycling acquisition in every 10 minutes with length of about 4 to 8 seconds and 64 to 128 seconds , respectively. All the data is automatically processed by server installed in the observatory. The EDI file including EM field spectrums and MT responses and time series files will be sent the data center by internet. There shows observation data since the network set up. We get some EM field spectrum variations and the apparent resistivity changes of different frequencies with time on observatories. They show some regular and irregular changes. This study is supported by The ELF Engineering Project of China (15212Z0000001), National Natural Science Foundation of China (41674081) etc.

Suppressing beam-centroid motion in a long-pulse linear induction accelerator

NASA Astrophysics Data System (ADS)

Ekdahl, Carl; Abeyta, E. O.; Archuleta, R.; Bender, H.; Broste, W.; Carlson, C.; Cook, G.; Frayer, D.; Harrison, J.; Hughes, T.; Johnson, J.; Jacquez, E.; McCuistian, B. Trent; Montoya, N.; Nath, S.; Nielsen, K.; Rose, C.; Schulze, M.; Smith, H. V.; Thoma, C.; Tom, C. Y.

2011-12-01

The second axis of the dual-axis radiography of hydrodynamic testing (DARHT) facility produces up to four radiographs within an interval of 1.6μs. It does this by slicing four micropulses out of a 2-μs long electron beam pulse and focusing them onto a bremsstrahlung converter target. The 1.8-kA beam pulse is created by a dispenser cathode diode and accelerated to more than 16 MeV by the unique DARHT Axis-II linear induction accelerator (LIA). Beam motion in the accelerator would be a problem for multipulse flash radiography. High-frequency motion, such as from beam-breakup (BBU) instability, would blur the individual spots. Low-frequency motion, such as produced by pulsed-power variation, would produce spot-to-spot differences. In this article, we describe these sources of beam motion, and the measures we have taken to minimize it. Using the methods discussed, we have reduced beam motion at the accelerator exit to less than 2% of the beam envelope radius for the high-frequency BBU, and less than 1/3 of the envelope radius for the low-frequency sweep.

Anechoic Chamber test of the Electromagnetic Measurement System ground test unit

NASA Astrophysics Data System (ADS)

Stevenson, L. E.; Scott, L. D.; Oakes, E. T.

1987-04-01

The Electromagnetic Measurement System (EMMS) will acquire data on electromagnetic (EM) environments at key weapon locations on various aircraft certified for nuclear weapons. The high-frequency ground unit of the EMMS consists of an instrumented B61 bomb case that will measure (with current probes) the localized current density resulting from an applied EM field. For this portion of the EMMS, the first system test was performed in the Anechoic Chamber Facility at Sandia National Laboratories, Albuquerque, New Mexico. The EMMS pod was subjected to EM radiation at microwave frequencies of 1, 3, and 10 GHz. At each frequency, the EMMS pod was rotated at many positions relative to the microwave source so that the individual current probes were exposed to a direct line-of-sight illumination. The variations between the measured and calculated electric fields for the current probes with direct illumination by the EM source are within a few db. The results obtained from the anechoic test were better than expected and verify that the high frequency ground portion of the EMMS will accurately measure the EM environments for which it was designed.

Sequence, distribution and chromosomal context of class I and class II pilin genes of Neisseria meningitidis identified in whole genome sequences

PubMed Central

2014-01-01

Background Neisseria meningitidis expresses type four pili (Tfp) which are important for colonisation and virulence. Tfp have been considered as one of the most variable structures on the bacterial surface due to high frequency gene conversion, resulting in amino acid sequence variation of the major pilin subunit (PilE). Meningococci express either a class I or a class II pilE gene and recent work has indicated that class II pilins do not undergo antigenic variation, as class II pilE genes encode conserved pilin subunits. The purpose of this work was to use whole genome sequences to further investigate the frequency and variability of the class II pilE genes in meningococcal isolate collections. Results We analysed over 600 publically available whole genome sequences of N. meningitidis isolates to determine the sequence and genomic organization of pilE. We confirmed that meningococcal strains belonging to a limited number of clonal complexes (ccs, namely cc1, cc5, cc8, cc11 and cc174) harbour a class II pilE gene which is conserved in terms of sequence and chromosomal context. We also identified pilS cassettes in all isolates with class II pilE, however, our analysis indicates that these do not serve as donor sequences for pilE/pilS recombination. Furthermore, our work reveals that the class II pilE locus lacks the DNA sequence motifs that enable (G4) or enhance (Sma/Cla repeat) pilin antigenic variation. Finally, through analysis of pilin genes in commensal Neisseria species we found that meningococcal class II pilE genes are closely related to pilE from Neisseria lactamica and Neisseria polysaccharea, suggesting horizontal transfer among these species. Conclusions Class II pilins can be defined by their amino acid sequence and genomic context and are present in meningococcal isolates which have persisted and spread globally. The absence of G4 and Sma/Cla sequences adjacent to the class II pilE genes is consistent with the lack of pilin subunit variation in these isolates, although horizontal transfer may generate class II pilin diversity. This study supports the suggestion that high frequency antigenic variation of pilin is not universal in pathogenic Neisseria. PMID:24690385

Confirmation of an anatomic variation of the recurrent laryngeal nerve at site of entry into the larynx in Chinese population.

PubMed

Shao, Tanglei; Qiu, Weihua; Yang, Weiping

2016-01-01

This study was aimed at analyzing the frequency of the newly reported variation and the frequency of postoperative palsy associated with three different kinds of known variations. We conducted a retrospective study on the data of 2068 consecutive Chinese patients who underwent thyroidectomy. The study included 1362 left and 1507 right (2869 in total) RLNs. Among all the RLNs, 548 were found to have variations at the laryngeal entry of the RLN. The most frequent variation was extralaryngeal branching (n=322), followed by the fan-shaped branching (n=201). Our newly identified variation was also noted in 25 of our patients. In these cases, the RLN entered the larynx from sites that were distant from the posterior cricothyroid joint. The distance from the entry of the RLN to the back of cricothyroid joints was over 5mm. Compared to the rates reported from other countries, the rate of the first type of variation is lower, while that of the second type is higher. The frequency of the new variation has not been reported in other populations, but it is consistent with our previous finding. The incidence of postoperative palsy was greater for RLNs with the first and third types of variations than in the normal RLNs. We confirmed that the incidence of patients with the new type of variation of the RLN at the entry of the larynx was about 1% in Chinese. Awareness among surgeons regarding this variation is important to avoid postoperative palsy. Copyright © 2016 Elsevier Inc. All rights reserved.

Deformation of giant vesicles in AC electric fields —Dependence of the prolate-to-oblate transition frequency on vesicle radius

NASA Astrophysics Data System (ADS)

Antonova, K.; Vitkova, V.; Mitov, M. D.

2010-02-01

The electrodeformation of giant vesicles is studied as a function of their radii and the frequency of the applied AC field. At low frequency the shape is prolate, at sufficiently high frequency it is oblate and at some frequency, fc, the shape changes from prolate to oblate. A linear dependence of the prolate-to-oblate transition inverse frequency, 1/fc, on the vesicle radius is found. The nature of this phenomenon does not change with the variation of both the solution conductivity, σ, and the type of the fluid enclosed by the lipid membrane (water, sucrose or glucose aqueous solution). When σ increases, the value of fc increases while the slope of the line 1/fc(r) decreases. For vesicles in symmetrical conditions (the same conductivity of the inner and the outer solution) a linear dependence between σ and the critical frequency, fc, is obtained for conductivities up to σ=114 μS/cm. For vesicles with sizes below a certain minimum radius, depending on the solution conductivity, no shape transition could be observed.

A spectral power analysis of driving behavior changes during the transition from nondistraction to distraction.

PubMed

Wang, Yuan; Bao, Shan; Du, Wenjun; Ye, Zhirui; Sayer, James R

2017-11-17

This article investigated and compared frequency domain and time domain characteristics of drivers' behaviors before and after the start of distracted driving. Data from an existing naturalistic driving study were used. Fast Fourier transform (FFT) was applied for the frequency domain analysis to explore drivers' behavior pattern changes between nondistracted (prestarting of visual-manual task) and distracted (poststarting of visual-manual task) driving periods. Average relative spectral power in a low frequency range (0-0.5 Hz) and the standard deviation in a 10-s time window of vehicle control variables (i.e., lane offset, yaw rate, and acceleration) were calculated and further compared. Sensitivity analyses were also applied to examine the reliability of the time and frequency domain analyses. Results of the mixed model analyses from the time and frequency domain analyses all showed significant degradation in lateral control performance after engaging in visual-manual tasks while driving. Results of the sensitivity analyses suggested that the frequency domain analysis was less sensitive to the frequency bandwidth, whereas the time domain analysis was more sensitive to the time intervals selected for variation calculations. Different time interval selections can result in significantly different standard deviation values, whereas average spectral power analysis on yaw rate in both low and high frequency bandwidths showed consistent results, that higher variation values were observed during distracted driving when compared to nondistracted driving. This study suggests that driver state detection needs to consider the behavior changes during the prestarting periods, instead of only focusing on periods with physical presence of distraction, such as cell phone use. Lateral control measures can be a better indicator of distraction detection than longitudinal controls. In addition, frequency domain analyses proved to be a more robust and consistent method in assessing driving performance compared to time domain analyses.

Removal of ring artifacts in microtomography by characterization of scintillator variations.

PubMed

Vågberg, William; Larsson, Jakob C; Hertz, Hans M

2017-09-18

Ring artifacts reduce image quality in tomography, and arise from faulty detector calibration. In microtomography, we have identified that ring artifacts can arise due to high-spatial frequency variations in the scintillator thickness. Such variations are normally removed by a flat-field correction. However, as the spectrum changes, e.g. due to beam hardening, the detector response varies non-uniformly introducing ring artifacts that persist after flat-field correction. In this paper, we present a method to correct for ring artifacts from variations in scintillator thickness by using a simple method to characterize the local scintillator response. The method addresses the actual physical cause of the ring artifacts, in contrary to many other ring artifact removal methods which rely only on image post-processing. By applying the technique to an experimental phantom tomography, we show that ring artifacts are strongly reduced compared to only making a flat-field correction.