Exploring New Challenges of High-Resolution SWOT Satellite Altimetry with a Regional Model of the Solomon Sea

NASA Astrophysics Data System (ADS)

Brasseur, P.; Verron, J. A.; Djath, B.; Duran, M.; Gaultier, L.; Gourdeau, L.; Melet, A.; Molines, J. M.; Ubelmann, C.

2014-12-01

The upcoming high-resolution SWOT altimetry satellite will provide an unprecedented description of the ocean dynamic topography for studying sub- and meso-scale processes in the ocean. But there is still much uncertainty on the signal that will be observed. There are many scientific questions that are unresolved about the observability of altimetry at vhigh resolution and on the dynamical role of the ocean meso- and submesoscales. In addition, SWOT data will raise specific problems due to the size of the data flows. These issues will probably impact the data assimilation approaches for future scientific or operational oceanography applications. In this work, we propose to use a high-resolution numerical model of the Western Pacific Solomon Sea as a regional laboratory to explore such observability and dynamical issues, as well as new data assimilation challenges raised by SWOT. The Solomon Sea connects subtropical water masses to the equatorial ones through the low latitude western boundary currents and could potentially modulate the tropical Pacific climate. In the South Western Pacific, the Solomon Sea exhibits very intense eddy kinetic energy levels, while relatively little is known about the mesoscale and submesoscale activities in this region. The complex bathymetry of the region, complicated by the presence of narrow straits and numerous islands, raises specific challenges. So far, a Solomon sea model configuration has been set up at 1/36° resolution. Numerical simulations have been performed to explore the meso- and submesoscales dynamics. The numerical solutions which have been validated against available in situ data, show the development of small scale features, eddies, fronts and filaments. Spectral analysis reveals a behavior that is consistent with the SQG theory. There is a clear evidence of energy cascade from the small scales including the submesoscales, although those submesoscales are only partially resolved by the model. In parallel, investigations have been conducted using image assimilation approaches in order to explore the richness of high-resolution altimetry missions. These investigations illustrate the potential benefit of combining tracer fields (SST, SSS and spiciness) with high-resolution SWOT data to estimate the fine-scale circulation.

SIL-STED microscopy technique enhancing super-resolution of fluorescence microscopy

NASA Astrophysics Data System (ADS)

Park, No-Cheol; Lim, Geon; Lee, Won-sup; Moon, Hyungbae; Choi, Guk-Jong; Park, Young-Pil

2017-08-01

We have characterized a new type STED microscope which combines a high numerical aperture (NA) optical head with a solid immersion lens (SIL), and we call it as SIL-STED microscope. The advantage of a SIL-STED microscope is that its high NA of the SIL makes it superior to a general STED microscope in lateral resolution, thus overcoming the optical diffraction limit at the macromolecular level and enabling advanced super-resolution imaging of cell surface or cell membrane structure and function Do. This study presents the first implementation of higher NA illumination in a STED microscope limiting the fluorescence lateral resolution to about 40 nm. The refractive index of the SIL which is made of material KTaO3 is about 2.23 and 2.20 at a wavelength of 633 nm and 780 nm which are used for excitation and depletion in STED imaging, respectively. Based on the vector diffraction theory, the electric field focused by the SILSTED microscope is numerically calculated so that the numerical results of the point dispersion function of the microscope and the expected resolution could be analyzed. For further investigation, fluorescence imaging of nano size fluorescent beads is fulfilled to show improved performance of the technique.

Assessment of a high-resolution central scheme for the solution of the relativistic hydrodynamics equations

NASA Astrophysics Data System (ADS)

Lucas-Serrano, A.; Font, J. A.; Ibáñez, J. M.; Martí, J. M.

2004-12-01

We assess the suitability of a recent high-resolution central scheme developed by \\cite{kurganov} for the solution of the relativistic hydrodynamic equations. The novelty of this approach relies on the absence of Riemann solvers in the solution procedure. The computations we present are performed in one and two spatial dimensions in Minkowski spacetime. Standard numerical experiments such as shock tubes and the relativistic flat-faced step test are performed. As an astrophysical application the article includes two-dimensional simulations of the propagation of relativistic jets using both Cartesian and cylindrical coordinates. The simulations reported clearly show the capabilities of the numerical scheme of yielding satisfactory results, with an accuracy comparable to that obtained by the so-called high-resolution shock-capturing schemes based upon Riemann solvers (Godunov-type schemes), even well inside the ultrarelativistic regime. Such a central scheme can be straightforwardly applied to hyperbolic systems of conservation laws for which the characteristic structure is not explicitly known, or in cases where a numerical computation of the exact solution of the Riemann problem is prohibitively expensive. Finally, we present comparisons with results obtained using various Godunov-type schemes as well as with those obtained using other high-resolution central schemes which have recently been reported in the literature.

Multi-slice ptychography with large numerical aperture multilayer Laue lenses

DOE PAGES

Ozturk, Hande; Yan, Hanfei; He, Yan; ...

2018-05-09

Here, the highly convergent x-ray beam focused by multilayer Laue lenses with large numerical apertures is used as a three-dimensional (3D) probe to image layered structures with an axial separation larger than the depth of focus. Instead of collecting weakly scattered high-spatial-frequency signals, the depth-resolving power is provided purely by the intense central cone diverged from the focused beam. Using the multi-slice ptychography method combined with the on-the-fly scan scheme, two layers of nanoparticles separated by 10 μm are successfully reconstructed with 8.1 nm lateral resolution and with a dwell time as low as 0.05 s per scan point. Thismore » approach obtains high-resolution images with extended depth of field, which paves the way for multi-slice ptychography as a high throughput technique for high-resolution 3D imaging of thick samples.« less

Multi-slice ptychography with large numerical aperture multilayer Laue lenses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ozturk, Hande; Yan, Hanfei; He, Yan

Here, the highly convergent x-ray beam focused by multilayer Laue lenses with large numerical apertures is used as a three-dimensional (3D) probe to image layered structures with an axial separation larger than the depth of focus. Instead of collecting weakly scattered high-spatial-frequency signals, the depth-resolving power is provided purely by the intense central cone diverged from the focused beam. Using the multi-slice ptychography method combined with the on-the-fly scan scheme, two layers of nanoparticles separated by 10 μm are successfully reconstructed with 8.1 nm lateral resolution and with a dwell time as low as 0.05 s per scan point. Thismore » approach obtains high-resolution images with extended depth of field, which paves the way for multi-slice ptychography as a high throughput technique for high-resolution 3D imaging of thick samples.« less

Dual-axis confocal microscope for high-resolution in vivo imaging

PubMed Central

Wang, Thomas D.; Mandella, Michael J.; Contag, Christopher H.; Kino, Gordon S.

2007-01-01

We describe a novel confocal microscope that uses separate low-numerical-aperture objectives with the illumination and collection axes crossed at angle θ from the midline. This architecture collects images in scattering media with high transverse and axial resolution, long working distance, large field of view, and reduced noise from scattered light. We measured transverse and axial (FWHM) resolution of 1.3 and 2.1 μm, respectively, in free space, and confirm subcellular resolution in excised esophageal mucosa. The optics may be scaled to millimeter dimensions and fiber coupled for collection of high-resolution images in vivo. PMID:12659264

Efficient Low Dissipative High Order Schemes for Multiscale MHD Flows

NASA Technical Reports Server (NTRS)

Sjoegreen, Bjoern; Yee, Helen C.; Mansour, Nagi (Technical Monitor)

2002-01-01

Accurate numerical simulations of complex multiscale compressible viscous flows, especially high speed turbulence combustion and acoustics, demand high order schemes with adaptive numerical dissipation controls. Standard high resolution shock-capturing methods are too dissipative to capture the small scales and/or long-time wave propagations without extreme grid refinements and small time steps. An integrated approach for the control of numerical dissipation in high order schemes for the compressible Euler and Navier-Stokes equations has been developed and verified by the authors and collaborators. These schemes are suitable for the problems in question. Basically, the scheme consists of sixth-order or higher non-dissipative spatial difference operators as the base scheme. To control the amount of numerical dissipation, multiresolution wavelets are used as sensors to adaptively limit the amount and to aid the selection and/or blending of the appropriate types of numerical dissipation to be used. Magnetohydrodynamics (MHD) waves play a key role in drag reduction in highly maneuverable high speed combat aircraft, in space weather forecasting, and in the understanding of the dynamics of the evolution of our solar system and the main sequence stars. Although there exist a few well-studied second and third-order high-resolution shock-capturing schemes for the MHD in the literature, these schemes are too diffusive and not practical for turbulence/combustion MHD flows. On the other hand, extension of higher than third-order high-resolution schemes to the MHD system of equations is not straightforward. Unlike the hydrodynamic equations, the inviscid MHD system is non-strictly hyperbolic with non-convex fluxes. The wave structures and shock types are different from their hydrodynamic counterparts. Many of the non-traditional hydrodynamic shocks are not fully understood. Consequently, reliable and highly accurate numerical schemes for multiscale MHD equations pose a great challenge to algorithm development. In addition, controlling the numerical error of the divergence free condition of the magnetic fields for high order methods has been a stumbling block. Lower order methods are not practical for the astrophysical problems in question. We propose to extend our hydrodynamics schemes to the MHD equations with several desired properties over commonly used MHD schemes.

Thermodynamical effects and high resolution methods for compressible fluid flows

NASA Astrophysics Data System (ADS)

Li, Jiequan; Wang, Yue

2017-08-01

One of the fundamental differences of compressible fluid flows from incompressible fluid flows is the involvement of thermodynamics. This difference should be manifested in the design of numerical schemes. Unfortunately, the role of entropy, expressing irreversibility, is often neglected even though the entropy inequality, as a conceptual derivative, is verified for some first order schemes. In this paper, we refine the GRP solver to illustrate how the thermodynamical variation is integrated into the design of high resolution methods for compressible fluid flows and demonstrate numerically the importance of thermodynamic effects in the resolution of strong waves. As a by-product, we show that the GRP solver works for generic equations of state, and is independent of technical arguments.

Optical coherence microscope for invariant high resolution in vivo skin imaging

NASA Astrophysics Data System (ADS)

Murali, S.; Lee, K. S.; Meemon, P.; Rolland, J. P.

2008-02-01

A non-invasive, reliable and affordable imaging system with the capability of detecting skin pathologies such as skin cancer would be a valuable tool to use for pre-screening and diagnostic applications. Optical Coherence Microscopy (OCM) is emerging as a building block for in vivo optical diagnosis, where high numerical aperture optics is introduced in the sample arm to achieve high lateral resolution. While high numerical aperture optics enables realizing high lateral resolution at the focus point, dynamic focusing is required to maintain the target lateral resolution throughout the depth of the sample being imaged. In this paper, we demonstrate the ability to dynamically focus in real-time with no moving parts to a depth of up to 2mm in skin-equivalent tissue in order to achieve 3.5μm lateral resolution throughout an 8 cubic millimeter sample. The built-in dynamic focusing ability is provided by an addressable liquid lens embedded in custom-designed optics which was designed for a broadband laser source of 120 nm bandwidth centered at around 800nm. The imaging probe was designed to be low-cost and portable. Design evaluation and tolerance analysis results show that the probe is robust to manufacturing errors and produces consistent high performance throughout the imaging volume.

Spatial Modeling of Geometallurgical Properties: Techniques and a Case Study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deutsch, Jared L., E-mail: jdeutsch@ualberta.ca; Palmer, Kevin; Deutsch, Clayton V.

High-resolution spatial numerical models of metallurgical properties constrained by geological controls and more extensively by measured grade and geomechanical properties constitute an important part of geometallurgy. Geostatistical and other numerical techniques are adapted and developed to construct these high-resolution models accounting for all available data. Important issues that must be addressed include unequal sampling of the metallurgical properties versus grade assays, measurements at different scale, and complex nonlinear averaging of many metallurgical parameters. This paper establishes techniques to address each of these issues with the required implementation details and also demonstrates geometallurgical mineral deposit characterization for a copper–molybdenum deposit inmore » South America. High-resolution models of grades and comminution indices are constructed, checked, and are rigorously validated. The workflow demonstrated in this case study is applicable to many other deposit types.« less

High-magnification super-resolution FINCH microscopy using birefringent crystal lens interferometers

NASA Astrophysics Data System (ADS)

Siegel, Nisan; Lupashin, Vladimir; Storrie, Brian; Brooker, Gary

2016-12-01

Fresnel incoherent correlation holography (FINCH) microscopy is a promising approach for high-resolution biological imaging but has so far been limited to use with low-magnification, low-numerical-aperture configurations. We report the use of in-line incoherent interferometers made from uniaxial birefringent α-barium borate (α-BBO) or calcite crystals that overcome the aberrations and distortions present with previous implementations that employed spatial light modulators or gradient refractive index lenses. FINCH microscopy incorporating these birefringent elements and high-numerical-aperture oil immersion objectives could outperform standard wide-field fluorescence microscopy, with, for example, a 149 nm lateral point spread function at a wavelength of 590 nm. Enhanced resolution was confirmed with sub-resolution fluorescent beads. Taking the Golgi apparatus as a biological example, three different proteins labelled with GFP and two other fluorescent dyes in HeLa cells were resolved with an image quality that is comparable to similar samples captured by structured illumination microscopy.

Massive black hole and gas dynamics in galaxy nuclei mergers - I. Numerical implementation

NASA Astrophysics Data System (ADS)

Lupi, Alessandro; Haardt, Francesco; Dotti, Massimo

2015-01-01

Numerical effects are known to plague adaptive mesh refinement (AMR) codes when treating massive particles, e.g. representing massive black holes (MBHs). In an evolving background, they can experience strong, spurious perturbations and then follow unphysical orbits. We study by means of numerical simulations the dynamical evolution of a pair MBHs in the rapidly and violently evolving gaseous and stellar background that follows a galaxy major merger. We confirm that spurious numerical effects alter the MBH orbits in AMR simulations, and show that numerical issues are ultimately due to a drop in the spatial resolution during the simulation, drastically reducing the accuracy in the gravitational force computation. We therefore propose a new refinement criterion suited for massive particles, able to solve in a fast and precise way for their orbits in highly dynamical backgrounds. The new refinement criterion we designed enforces the region around each massive particle to remain at the maximum resolution allowed, independently upon the local gas density. Such maximally resolved regions then follow the MBHs along their orbits, and effectively avoids all spurious effects caused by resolution changes. Our suite of high-resolution, AMR hydrodynamic simulations, including different prescriptions for the sub-grid gas physics, shows that the new refinement implementation has the advantage of not altering the physical evolution of the MBHs, accounting for all the non-trivial physical processes taking place in violent dynamical scenarios, such as the final stages of a galaxy major merger.

A numerical study of the axisymmetric Couette-Taylor problem using a fast high-resolution second-order central scheme

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kupferman, R.

The author presents a numerical study of the axisymmetric Couette-Taylor problem using a finite difference scheme. The scheme is based on a staggered version of a second-order central-differencing method combined with a discrete Hodge projection. The use of central-differencing operators obviates the need to trace the characteristic flow associated with the hyperbolic terms. The result is a simple and efficient scheme which is readily adaptable to other geometries and to more complicated flows. The scheme exhibits competitive performance in terms of accuracy, resolution, and robustness. The numerical results agree accurately with linear stability theory and with previous numerical studies.

ON THE IMPACT OF SUPER RESOLUTION WSR-88D DOPPLER RADAR DATA ASSIMILATION ON HIGH RESOLUTION NUMERICAL MODEL FORECASTS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chiswell, S

2009-01-11

Assimilation of radar velocity and precipitation fields into high-resolution model simulations can improve precipitation forecasts with decreased 'spin-up' time and improve short-term simulation of boundary layer winds (Benjamin, 2004 & 2007; Xiao, 2008) which is critical to improving plume transport forecasts. Accurate description of wind and turbulence fields is essential to useful atmospheric transport and dispersion results, and any improvement in the accuracy of these fields will make consequence assessment more valuable during both routine operation as well as potential emergency situations. During 2008, the United States National Weather Service (NWS) radars implemented a significant upgrade which increased the real-timemore » level II data resolution to 8 times their previous 'legacy' resolution, from 1 km range gate and 1.0 degree azimuthal resolution to 'super resolution' 250 m range gate and 0.5 degree azimuthal resolution (Fig 1). These radar observations provide reflectivity, velocity and returned power spectra measurements at a range of up to 300 km (460 km for reflectivity) at a frequency of 4-5 minutes and yield up to 13.5 million point observations per level in super-resolution mode. The migration of National Weather Service (NWS) WSR-88D radars to super resolution is expected to improve warning lead times by detecting small scale features sooner with increased reliability; however, current operational mesoscale model domains utilize grid spacing several times larger than the legacy data resolution, and therefore the added resolution of radar data is not fully exploited. The assimilation of super resolution reflectivity and velocity data into high resolution numerical weather model forecasts where grid spacing is comparable to the radar data resolution is investigated here to determine the impact of the improved data resolution on model predictions.« less

High Order Finite Difference Methods with Subcell Resolution for 2D Detonation Waves

NASA Technical Reports Server (NTRS)

Wang, W.; Shu, C. W.; Yee, H. C.; Sjogreen, B.

2012-01-01

In simulating hyperbolic conservation laws in conjunction with an inhomogeneous stiff source term, if the solution is discontinuous, spurious numerical results may be produced due to different time scales of the transport part and the source term. This numerical issue often arises in combustion and high speed chemical reacting flows.

Solid immersion lenses for enhancing the optical resolution of thermal and electroluminescence mapping of GaN-on-SiC transistors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pomeroy, J. W., E-mail: James.Pomeroy@Bristol.ac.uk; Kuball, M.

2015-10-14

Solid immersion lenses (SILs) are shown to greatly enhance optical spatial resolution when measuring AlGaN/GaN High Electron Mobility Transistors (HEMTs), taking advantage of the high refractive index of the SiC substrates commonly used for these devices. Solid immersion lenses can be applied to techniques such as electroluminescence emission microscopy and Raman thermography, aiding the development device physics models. Focused ion beam milling is used to fabricate solid immersion lenses in SiC substrates with a numerical aperture of 1.3. A lateral spatial resolution of 300 nm is demonstrated at an emission wavelength of 700 nm, and an axial spatial resolution of 1.7 ± 0.3 μm atmore » a laser wavelength of 532 nm is demonstrated; this is an improvement of 2.5× and 5×, respectively, when compared with a conventional 0.5 numerical aperture objective lens without a SIL. These results highlight the benefit of applying the solid immersion lenses technique to the optical characterization of GaN HEMTs. Further improvements may be gained through aberration compensation and increasing the SIL numerical aperture.« less

High-resolution numerical models for smoke transport in plumes from wildland fires

Treesearch

Philip Cunningham; Scott Goodrick

2013-01-01

A high-resolution large-eddy simulation (LES) model is employed to examine the fundamental structure and dynamics of buoyant plumes arising from heat sources representative of wildland fires. Herein we describe several aspects of the mean properties of the simulated plumes. Mean plume trajectories are apparently well described by the traditional two-thirds law for...

A High-Resolution Capability for Large-Eddy Simulation of Jet Flows

NASA Technical Reports Server (NTRS)

DeBonis, James R.

2011-01-01

A large-eddy simulation (LES) code that utilizes high-resolution numerical schemes is described and applied to a compressible jet flow. The code is written in a general manner such that the accuracy/resolution of the simulation can be selected by the user. Time discretization is performed using a family of low-dispersion Runge-Kutta schemes, selectable from first- to fourth-order. Spatial discretization is performed using central differencing schemes. Both standard schemes, second- to twelfth-order (3 to 13 point stencils) and Dispersion Relation Preserving schemes from 7 to 13 point stencils are available. The code is written in Fortran 90 and uses hybrid MPI/OpenMP parallelization. The code is applied to the simulation of a Mach 0.9 jet flow. Four-stage third-order Runge-Kutta time stepping and the 13 point DRP spatial discretization scheme of Bogey and Bailly are used. The high resolution numerics used allows for the use of relatively sparse grids. Three levels of grid resolution are examined, 3.5, 6.5, and 9.2 million points. Mean flow, first-order turbulent statistics and turbulent spectra are reported. Good agreement with experimental data for mean flow and first-order turbulent statistics is shown.

VizieR Online Data Catalog: Abundances in the local region. II. F, G, and K dwarfs (Luck+, 2017)

NASA Astrophysics Data System (ADS)

Luck, R. E.

2017-06-01

The McDonald Observatory 2.1m Telescope and Sandiford Cassegrain Echelle Spectrograph provided much of the observational data for this study. High-resolution spectra were obtained during numerous observing runs, from 1996 to 2010. The spectra cover a continuous wavelength range from about 484 to 700nm, with a resolving power of about 60000. The wavelength range used demands two separate observations--one centered at about 520nm, and the other at about 630nm. Typical S/N values per pixel for the spectra are more than 150. Spectra of 57 dwarfs were obtained using the Hobby-Eberly telescope and High-Resolution Spectrograph. The spectra have a resolution of 30000, spanning the wavelength range of 400 to 785nm. They also have very high signal-to-noise ratios, >300 per resolution element in numerous cases. The last set of spectra were obtained from the ELODIE Archive (Moultaka et al. 2004PASP..116..693M). These spectra are fully processed, including order co-addition, and have a continuous wavelength span of 400 to 680nm and a resolution of 42000. The ELODIE spectra utilized here all have S/N>75 per pixel. (6 data files).

Improving Numerical Weather Predictions of Summertime Precipitation Over the Southeastern U.S. Through a High-Resolution Initialization of the Surface State

NASA Technical Reports Server (NTRS)

Case, Jonathan L.; Kumar, Sujay V.; Krikishen, Jayanthi; Jedlovec, Gary J.

2011-01-01

It is hypothesized that high-resolution, accurate representations of surface properties such as soil moisture and sea surface temperature are necessary to improve simulations of summertime pulse-type convective precipitation in high resolution models. This paper presents model verification results of a case study period from June-August 2008 over the Southeastern U.S. using the Weather Research and Forecasting numerical weather prediction model. Experimental simulations initialized with high-resolution land surface fields from the NASA Land Information System (LIS) and sea surface temperature (SST) derived from the Moderate Resolution Imaging Spectroradiometer (MODIS) are compared to a set of control simulations initialized with interpolated fields from the National Centers for Environmental Prediction 12-km North American Mesoscale model. The LIS land surface and MODIS SSTs provide a more detailed surface initialization at a resolution comparable to the 4-km model grid spacing. Soil moisture from the LIS spin-up run is shown to respond better to the extreme rainfall of Tropical Storm Fay in August 2008 over the Florida peninsula. The LIS has slightly lower errors and higher anomaly correlations in the top soil layer, but exhibits a stronger dry bias in the root zone. The model sensitivity to the alternative surface initial conditions is examined for a sample case, showing that the LIS/MODIS data substantially impact surface and boundary layer properties.

On the use of GPS tomography to investigate water vapor variability during a Mistral/sea breeze event in southeastern France

NASA Astrophysics Data System (ADS)

Bastin, Sophie; Champollion, Cédric; Bock, Olivier; Drobinski, Philippe; Masson, Frédéric

2005-03-01

Global Positioning System (GPS) tomography analyses of water vapor, complemented by high-resolution numerical simulations are used to investigate a Mistral/sea breeze event in the region of Marseille, France, during the ESCOMPTE experiment. This is the first time GPS tomography has been used to validate the three-dimensional water vapor concentration from numerical simulation, and to analyze a small-scale meteorological event. The high spatial and temporal resolution of GPS analyses provides a unique insight into the evolution of the vertical and horizontal distribution of water vapor during the Mistral/sea-breeze transition.

[Study on the effect of solar spectra on the retrieval of atmospheric CO2 concentration using high resolution absorption spectra].

PubMed

Hu, Zhen-Hua; Huang, Teng; Wang, Ying-Ping; Ding, Lei; Zheng, Hai-Yang; Fang, Li

2011-06-01

Taking solar source as radiation in the near-infrared high-resolution absorption spectrum is widely used in remote sensing of atmospheric parameters. The present paper will take retrieval of the concentration of CO2 for example, and study the effect of solar spectra resolution. Retrieving concentrations of CO2 by using high resolution absorption spectra, a method which uses the program provided by AER to calculate the solar spectra at the top of atmosphere as radiation and combine with the HRATS (high resolution atmospheric transmission simulation) to simulate retrieving concentration of CO2. Numerical simulation shows that the accuracy of solar spectrum is important to retrieval, especially in the hyper-resolution spectral retrieavl, and the error of retrieval concentration has poor linear relation with the resolution of observation, but there is a tendency that the decrease in the resolution requires low resolution of solar spectrum. In order to retrieve the concentration of CO2 of atmosphere, the authors' should take full advantage of high-resolution solar spectrum at the top of atmosphere.

Large-scale computations in fluid mechanics; Proceedings of the Fifteenth Summer Seminar on Applied Mathematics, University of California, La Jolla, CA, June 27-July 8, 1983. Parts 1 & 2

NASA Technical Reports Server (NTRS)

Engquist, B. E. (Editor); Osher, S. (Editor); Somerville, R. C. J. (Editor)

1985-01-01

Papers are presented on such topics as the use of semi-Lagrangian advective schemes in meteorological modeling; computation with high-resolution upwind schemes for hyperbolic equations; dynamics of flame propagation in a turbulent field; a modified finite element method for solving the incompressible Navier-Stokes equations; computational fusion magnetohydrodynamics; and a nonoscillatory shock capturing scheme using flux-limited dissipation. Consideration is also given to the use of spectral techniques in numerical weather prediction; numerical methods for the incorporation of mountains in atmospheric models; techniques for the numerical simulation of large-scale eddies in geophysical fluid dynamics; high-resolution TVD schemes using flux limiters; upwind-difference methods for aerodynamic problems governed by the Euler equations; and an MHD model of the earth's magnetosphere.

Improving PET spatial resolution and detectability for prostate cancer imaging

NASA Astrophysics Data System (ADS)

Bal, H.; Guerin, L.; Casey, M. E.; Conti, M.; Eriksson, L.; Michel, C.; Fanti, S.; Pettinato, C.; Adler, S.; Choyke, P.

2014-08-01

Prostate cancer, one of the most common forms of cancer among men, can benefit from recent improvements in positron emission tomography (PET) technology. In particular, better spatial resolution, lower noise and higher detectability of small lesions could be greatly beneficial for early diagnosis and could provide a strong support for guiding biopsy and surgery. In this article, the impact of improved PET instrumentation with superior spatial resolution and high sensitivity are discussed, together with the latest development in PET technology: resolution recovery and time-of-flight reconstruction. Using simulated cancer lesions, inserted in clinical PET images obtained with conventional protocols, we show that visual identification of the lesions and detectability via numerical observers can already be improved using state of the art PET reconstruction methods. This was achieved using both resolution recovery and time-of-flight reconstruction, and a high resolution image with 2 mm pixel size. Channelized Hotelling numerical observers showed an increase in the area under the LROC curve from 0.52 to 0.58. In addition, a relationship between the simulated input activity and the area under the LROC curve showed that the minimum detectable activity was reduced by more than 23%.

Resolving the fine-scale structure in turbulent Rayleigh-Benard convection

NASA Astrophysics Data System (ADS)

Scheel, Janet; Emran, Mohammad; Schumacher, Joerg

2013-11-01

Results from high-resolution direct numerical simulations of turbulent Rayleigh-Benard convection in a cylindrical cell with an aspect ratio of one will be presented. We focus on the finest scales of convective turbulence, in particular the statistics of the kinetic energy and thermal dissipation rates in the bulk and the whole cell. These dissipation rates as well as the local dissipation scales are compared for different Rayleigh and Prandtl numbers. We also have investigated the convergence properties of our spectral element method and have found that both dissipation fields are very sensitive to insufficient resolution. We also demonstrate that global transport properties, such as the Nusselt number and the energy balances, are partly insensitive to insufficient resolution and yield consistent results even when the dissipation fields are under-resolved. Our present numerical framework is also compared with high-resolution simulations which use a finite difference method. For most of the compared quantities the agreement is found to be satisfactory.

Earthquake Rupture Dynamics using Adaptive Mesh Refinement and High-Order Accurate Numerical Methods

NASA Astrophysics Data System (ADS)

Kozdon, J. E.; Wilcox, L.

2013-12-01

Our goal is to develop scalable and adaptive (spatial and temporal) numerical methods for coupled, multiphysics problems using high-order accurate numerical methods. To do so, we are developing an opensource, parallel library known as bfam (available at http://bfam.in). The first application to be developed on top of bfam is an earthquake rupture dynamics solver using high-order discontinuous Galerkin methods and summation-by-parts finite difference methods. In earthquake rupture dynamics, wave propagation in the Earth's crust is coupled to frictional sliding on fault interfaces. This coupling is two-way, required the simultaneous simulation of both processes. The use of laboratory-measured friction parameters requires near-fault resolution that is 4-5 orders of magnitude higher than that needed to resolve the frequencies of interest in the volume. This, along with earlier simulations using a low-order, finite volume based adaptive mesh refinement framework, suggest that adaptive mesh refinement is ideally suited for this problem. The use of high-order methods is motivated by the high level of resolution required off the fault in earlier the low-order finite volume simulations; we believe this need for resolution is a result of the excessive numerical dissipation of low-order methods. In bfam spatial adaptivity is handled using the p4est library and temporal adaptivity will be accomplished through local time stepping. In this presentation we will present the guiding principles behind the library as well as verification of code against the Southern California Earthquake Center dynamic rupture code validation test problems.

Research highlights: June 1990 - May 1991

NASA Technical Reports Server (NTRS)

1991-01-01

Linear instability calculations at MSFC have suggested that the Geophysical Fluid Flow Cell (GFFC) should exhibit classic baroclinic instability at accessible parameter settings. Interest was in the mechanisms of transition to temporal chaos and the evolution of spatio-temporal chaos. In order to understand more about such transitions, high resolution numerical experiments for the physically simplest model of two layer baroclinic instability were conducted. This model has the advantage that the numerical code is exponentially convergent and can be efficiently run for very long times, enabling the study of chaotic attractors without the often devastating effects of low-order trunction found in many previous studies. Numerical algorithms for implementing an empirical orthogonal function (EOF) analysis of the high resolution numerical results were completed. Under conditions of rapid rotation and relatively low differential heating, convection in a spherical shell takes place as columnar banana cells wrapped around the annular gap, but with axes oriented along the axis of rotation; these were clearly evident in the GFFC experiments. The results of recent numerical simulations of columnar convection and future research plans are presented.

Advances in stereomicroscopy

NASA Astrophysics Data System (ADS)

Schnitzler, H.; Zimmer, Klaus-Peter

2008-09-01

Similar to human's binocular vision, stereomicroscopes are comprised of two optical paths under a convergence angle providing a full perspective insight into the world's microstructure. The numerical aperture of stereomicroscopes has continuously increased over the years, reaching the point where the lenses of left and right perspective paths touched each other. This constraint appeared as an upper limit for the resolution of stereomicroscopes, as the resolution of a stereomicroscope was deduced from the numerical apertures of the two equally sized perspective channels. We present the optical design and advances in resolution of the world's first asymmetrical stereomicroscope, which is a technological breakthrough in many aspects of stereomicroscopes. This unique approach uses a large numerical aperture and thus an, so far, unachievable high lateral resolution in the one path, and a small aperture in the other path, which provides a high depth of field ("Fusion Optics"). This new concept is a technical challenge for the optical design of the zoom system as well as for the common main objectives. Furthermore, the new concept makes use of the particular way in which perspective information by binocular vision is formed in the human's brain. In conjunction with a research project at the University of Zurich, Leica Microsystems consolidated the functionality of this concept in to a new generation of stereomicroscopes.

A divergence-cleaning scheme for cosmological SPMHD simulations

NASA Astrophysics Data System (ADS)

Stasyszyn, F. A.; Dolag, K.; Beck, A. M.

2013-01-01

In magnetohydrodynamics (MHD), the magnetic field is evolved by the induction equation and coupled to the gas dynamics by the Lorentz force. We perform numerical smoothed particle magnetohydrodynamics (SPMHD) simulations and study the influence of a numerical magnetic divergence. For instabilities arising from {nabla }\\cdot {boldsymbol B} related errors, we find the hyperbolic/parabolic cleaning scheme suggested by Dedner et al. to give good results and prevent numerical artefacts from growing. Additionally, we demonstrate that certain current SPMHD implementations of magnetic field regularizations give rise to unphysical instabilities in long-time simulations. We also find this effect when employing Euler potentials (divergenceless by definition), which are not able to follow the winding-up process of magnetic field lines properly. Furthermore, we present cosmological simulations of galaxy cluster formation at extremely high resolution including the evolution of magnetic fields. We show synthetic Faraday rotation maps and derive structure functions to compare them with observations. Comparing all the simulations with and without divergence cleaning, we are able to confirm the results of previous simulations performed with the standard implementation of MHD in SPMHD at normal resolution. However, at extremely high resolution, a cleaning scheme is needed to prevent the growth of numerical {nabla }\\cdot {boldsymbol B} errors at small scales.

Differential absorption lidars for remote sensing of atmospheric pressure and temperature profiles

NASA Technical Reports Server (NTRS)

Korb, C. Laurence; Schwemmer, Geary K.; Famiglietti, Joseph; Walden, Harvey; Prasad, Coorg

1995-01-01

A near infrared differential absorption lidar technique is developed using atmospheric oxygen as a tracer for high resolution vertical profiles of pressure and temperature with high accuracy. Solid-state tunable lasers and high-resolution spectrum analyzers are developed to carry out ground-based and airborne measurement demonstrations and results of the measurements presented. Numerical error analysis of high-altitude airborne and spaceborne experiments is carried out, and system concepts developed for their implementation.

Turbulence sources, character, and effects in the stable boundary layer: Insights from multi-scale direct numerical simulations and new, high-resolution measurements

NASA Astrophysics Data System (ADS)

Fritts, Dave; Wang, Ling; Balsley, Ben; Lawrence, Dale

2013-04-01

A number of sources contribute to intermittent small-scale turbulence in the stable boundary layer (SBL). These include Kelvin-Helmholtz instability (KHI), gravity wave (GW) breaking, and fluid intrusions, among others. Indeed, such sources arise naturally in response to even very simple "multi-scale" superpositions of larger-scale GWs and smaller-scale GWs, mean flows, or fine structure (FS) throughout the atmosphere and the oceans. We describe here results of two direct numerical simulations (DNS) of these GW-FS interactions performed at high resolution and high Reynolds number that allow exploration of these turbulence sources and the character and effects of the turbulence that arises in these flows. Results include episodic turbulence generation, a broad range of turbulence scales and intensities, PDFs of dissipation fields exhibiting quasi-log-normal and more complex behavior, local turbulent mixing, and "sheet and layer" structures in potential temperature that closely resemble high-resolution measurements. Importantly, such multi-scale dynamics differ from their larger-scale, quasi-monochromatic gravity wave or quasi-horizontally homogeneous shear flow instabilities in significant ways. The ability to quantify such multi-scale dynamics with new, very high-resolution measurements is also advancing rapidly. New in-situ sensors on small, unmanned aerial vehicles (UAVs), balloons, or tethered systems are enabling definition of SBL (and deeper) environments and turbulence structure and dissipation fields with high spatial and temporal resolution and precision. These new measurement and modeling capabilities promise significant advances in understanding small-scale instability and turbulence dynamics, in quantifying their roles in mixing, transport, and evolution of the SBL environment, and in contributing to improved parameterizations of these dynamics in mesoscale, numerical weather prediction, climate, and general circulation models. We expect such measurement and modeling capabilities to also aid in the design of new and more comprehensive future SBL measurement programs.

Numerical simulation of immiscible viscous fingering using adaptive unstructured meshes

NASA Astrophysics Data System (ADS)

Adam, A.; Salinas, P.; Percival, J. R.; Pavlidis, D.; Pain, C.; Muggeridge, A. H.; Jackson, M.

2015-12-01

Displacement of one fluid by another in porous media occurs in various settings including hydrocarbon recovery, CO2 storage and water purification. When the invading fluid is of lower viscosity than the resident fluid, the displacement front is subject to a Saffman-Taylor instability and is unstable to transverse perturbations. These instabilities can grow, leading to fingering of the invading fluid. Numerical simulation of viscous fingering is challenging. The physics is controlled by a complex interplay of viscous and diffusive forces and it is necessary to ensure physical diffusion dominates numerical diffusion to obtain converged solutions. This typically requires the use of high mesh resolution and high order numerical methods. This is computationally expensive. We demonstrate here the use of a novel control volume - finite element (CVFE) method along with dynamic unstructured mesh adaptivity to simulate viscous fingering with higher accuracy and lower computational cost than conventional methods. Our CVFE method employs a discontinuous representation for both pressure and velocity, allowing the use of smaller control volumes (CVs). This yields higher resolution of the saturation field which is represented CV-wise. Moreover, dynamic mesh adaptivity allows high mesh resolution to be employed where it is required to resolve the fingers and lower resolution elsewhere. We use our results to re-examine the existing criteria that have been proposed to govern the onset of instability.Mesh adaptivity requires the mapping of data from one mesh to another. Conventional methods such as consistent interpolation do not readily generalise to discontinuous fields and are non-conservative. We further contribute a general framework for interpolation of CV fields by Galerkin projection. The method is conservative, higher order and yields improved results, particularly with higher order or discontinuous elements where existing approaches are often excessively diffusive.

High refractive index immersion liquid for superresolution 3D imaging using sapphire-based aplanatic numerical aperture increasing lens optics.

PubMed

Laskar, Junaid M; Shravan Kumar, P; Herminghaus, Stephan; Daniels, Karen E; Schröter, Matthias

2016-04-20

Optically transparent immersion liquids with refractive index (n∼1.77) to match the sapphire-based aplanatic numerical aperture increasing lens (aNAIL) are necessary for achieving deep 3D imaging with high spatial resolution. We report that antimony tribromide (SbBr₃) salt dissolved in liquid diiodomethane (CH₂I₂) provides a new high refractive index immersion liquid for optics applications. The refractive index is tunable from n=1.74 (pure) to n=1.873 (saturated), by adjusting either salt concentration or temperature; this allows it to match (or even exceed) the refractive index of sapphire. Importantly, the solution gives excellent light transmittance in the ultraviolet to near-infrared range, an improvement over commercially available immersion liquids. This refractive-index-matched immersion liquid formulation has enabled us to develop a sapphire-based aNAIL objective that has both high numerical aperture (NA=1.17) and long working distance (WD=12  mm). This opens up new possibilities for deep 3D imaging with high spatial resolution.

High resolution surface plasmon microscopy for cell imaging

NASA Astrophysics Data System (ADS)

Argoul, F.; Monier, K.; Roland, T.; Elezgaray, J.; Berguiga, L.

2010-04-01

We introduce a new non-labeling high resolution microscopy method for cellular imaging. This method called SSPM (Scanning Surface Plasmon Microscopy) pushes down the resolution limit of surface plasmon resonance imaging (SPRi) to sub-micronic scales. High resolution SPRi is obtained by the surface plasmon lauching with a high numerical aperture objective lens. The advantages of SPPM compared to other high resolution SPRi's rely on three aspects; (i) the interferometric detection of the back reflected light after plasmon excitation, (ii) the twodimensional scanning of the sample for image reconstruction, (iii) the radial polarization of light, enhancing both resolution and sensitivity. This microscope can afford a lateral resolution of - 150 nm in liquid environment and - 200 nm in air. We present in this paper images of IMR90 fibroblasts obtained with SSPM in dried environment. Internal compartments such as nucleus, nucleolus, mitochondria, cellular and nuclear membrane can be recognized without labelling. We propose an interpretation of the ability of SSPM to reveal high index contrast zones by a local decomposition of the V (Z) function describing the response of the SSPM.

Magnetoacoustic tomography with magnetic induction for high-resolution bioimepedance imaging through vector source reconstruction under the static field of MRI magnet.

PubMed

Mariappan, Leo; Hu, Gang; He, Bin

2014-02-01

Magnetoacoustic tomography with magnetic induction (MAT-MI) is an imaging modality to reconstruct the electrical conductivity of biological tissue based on the acoustic measurements of Lorentz force induced tissue vibration. This study presents the feasibility of the authors' new MAT-MI system and vector source imaging algorithm to perform a complete reconstruction of the conductivity distribution of real biological tissues with ultrasound spatial resolution. In the present study, using ultrasound beamformation, imaging point spread functions are designed to reconstruct the induced vector source in the object which is used to estimate the object conductivity distribution. Both numerical studies and phantom experiments are performed to demonstrate the merits of the proposed method. Also, through the numerical simulations, the full width half maximum of the imaging point spread function is calculated to estimate of the spatial resolution. The tissue phantom experiments are performed with a MAT-MI imaging system in the static field of a 9.4 T magnetic resonance imaging magnet. The image reconstruction through vector beamformation in the numerical and experimental studies gives a reliable estimate of the conductivity distribution in the object with a ∼ 1.5 mm spatial resolution corresponding to the imaging system frequency of 500 kHz ultrasound. In addition, the experiment results suggest that MAT-MI under high static magnetic field environment is able to reconstruct images of tissue-mimicking gel phantoms and real tissue samples with reliable conductivity contrast. The results demonstrate that MAT-MI is able to image the electrical conductivity properties of biological tissues with better than 2 mm spatial resolution at 500 kHz, and the imaging with MAT-MI under a high static magnetic field environment is able to provide improved imaging contrast for biological tissue conductivity reconstruction.

A Class of High-Resolution Explicit and Implicit Shock-Capturing Methods

NASA Technical Reports Server (NTRS)

Yee, H. C.

1994-01-01

The development of shock-capturing finite difference methods for hyperbolic conservation laws has been a rapidly growing area for the last decade. Many of the fundamental concepts, state-of-the-art developments and applications to fluid dynamics problems can only be found in meeting proceedings, scientific journals and internal reports. This paper attempts to give a unified and generalized formulation of a class of high-resolution, explicit and implicit shock capturing methods, and to illustrate their versatility in various steady and unsteady complex shock waves, perfect gases, equilibrium real gases and nonequilibrium flow computations. These numerical methods are formulated for the purpose of ease and efficient implementation into a practical computer code. The various constructions of high-resolution shock-capturing methods fall nicely into the present framework and a computer code can be implemented with the various methods as separate modules. Included is a systematic overview of the basic design principle of the various related numerical methods. Special emphasis will be on the construction of the basic nonlinear, spatially second and third-order schemes for nonlinear scalar hyperbolic conservation laws and the methods of extending these nonlinear scalar schemes to nonlinear systems via the approximate Riemann solvers and flux-vector splitting approaches. Generalization of these methods to efficiently include real gases and large systems of nonequilibrium flows will be discussed. Some perbolic conservation laws to problems containing stiff source terms and terms and shock waves are also included. The performance of some of these schemes is illustrated by numerical examples for one-, two- and three-dimensional gas-dynamics problems. The use of the Lax-Friedrichs numerical flux to obtain high-resolution shock-capturing schemes is generalized. This method can be extended to nonlinear systems of equations without the use of Riemann solvers or flux-vector splitting approaches and thus provides a large savings for multidimensional, equilibrium real gases and nonequilibrium flow computations.

Calibrating a numerical model's morphology using high-resolution spatial and temporal datasets from multithread channel flume experiments.

NASA Astrophysics Data System (ADS)

Javernick, L.; Bertoldi, W.; Redolfi, M.

2017-12-01

Accessing or acquiring high quality, low-cost topographic data has never been easier due to recent developments of the photogrammetric techniques of Structure-from-Motion (SfM). Researchers can acquire the necessary SfM imagery with various platforms, with the ability to capture millimetre resolution and accuracy, or large-scale areas with the help of unmanned platforms. Such datasets in combination with numerical modelling have opened up new opportunities to study river environments physical and ecological relationships. While numerical models overall predictive accuracy is most influenced by topography, proper model calibration requires hydraulic data and morphological data; however, rich hydraulic and morphological datasets remain scarce. This lack in field and laboratory data has limited model advancement through the inability to properly calibrate, assess sensitivity, and validate the models performance. However, new time-lapse imagery techniques have shown success in identifying instantaneous sediment transport in flume experiments and their ability to improve hydraulic model calibration. With new capabilities to capture high resolution spatial and temporal datasets of flume experiments, there is a need to further assess model performance. To address this demand, this research used braided river flume experiments and captured time-lapse observed sediment transport and repeat SfM elevation surveys to provide unprecedented spatial and temporal datasets. Through newly created metrics that quantified observed and modeled activation, deactivation, and bank erosion rates, the numerical model Delft3d was calibrated. This increased temporal data of both high-resolution time series and long-term temporal coverage provided significantly improved calibration routines that refined calibration parameterization. Model results show that there is a trade-off between achieving quantitative statistical and qualitative morphological representations. Specifically, statistical agreement simulations suffered to represent braiding planforms (evolving toward meandering), and parameterization that ensured braided produced exaggerated activation and bank erosion rates. Marie Sklodowska-Curie Individual Fellowship: River-HMV, 656917

A Theoretical Study and Numerical Simulation of a Quasi-Distributed Sensor Based on the Low-Finesse Fabry-Perot Interferometer: Frequency-Division Multiplexing

PubMed Central

Guillen Bonilla, José Trinidad; Guillen Bonilla, Alex; Rodríguez Betancourtt, Verónica M.; Guillen Bonilla, Héctor; Casillas Zamora, Antonio

2017-01-01

The application of the sensor optical fibers in the areas of scientific instrumentation and industrial instrumentation is very attractive due to its numerous advantages. In the industry of civil engineering for example, quasi-distributed sensors made with optical fiber are used for reliable strain and temperature measurements. Here, a quasi-distributed sensor in the frequency domain is discussed. The sensor consists of a series of low-finesse Fabry-Perot interferometers where each Fabry-Perot interferometer acts as a local sensor. Fabry-Perot interferometers are formed by pairs of identical low reflective Bragg gratings imprinted in a single mode fiber. All interferometer sensors have different cavity length, provoking frequency-domain multiplexing. The optical signal represents the superposition of all interference patterns which can be decomposed using the Fourier transform. The frequency spectrum was analyzed and sensor’s properties were defined. Following that, a quasi-distributed sensor was numerically simulated. Our sensor simulation considers sensor properties, signal processing, noise system, and instrumentation. The numerical results show the behavior of resolution vs. signal-to-noise ratio. From our results, the Fabry-Perot sensor has high resolution and low resolution. Both resolutions are conceivable because the Fourier Domain Phase Analysis (FDPA) algorithm elaborates two evaluations of Bragg wavelength shift. PMID:28420083

A Theoretical Study and Numerical Simulation of a Quasi-Distributed Sensor Based on the Low-Finesse Fabry-Perot Interferometer: Frequency-Division Multiplexing.

PubMed

Guillen Bonilla, José Trinidad; Guillen Bonilla, Alex; Rodríguez Betancourtt, Verónica M; Guillen Bonilla, Héctor; Casillas Zamora, Antonio

2017-04-14

The application of the sensor optical fibers in the areas of scientific instrumentation and industrial instrumentation is very attractive due to its numerous advantages. In the industry of civil engineering for example, quasi-distributed sensors made with optical fiber are used for reliable strain and temperature measurements. Here, a quasi-distributed sensor in the frequency domain is discussed. The sensor consists of a series of low-finesse Fabry-Perot interferometers where each Fabry-Perot interferometer acts as a local sensor. Fabry-Perot interferometers are formed by pairs of identical low reflective Bragg gratings imprinted in a single mode fiber. All interferometer sensors have different cavity length, provoking frequency-domain multiplexing. The optical signal represents the superposition of all interference patterns which can be decomposed using the Fourier transform. The frequency spectrum was analyzed and sensor's properties were defined. Following that, a quasi-distributed sensor was numerically simulated. Our sensor simulation considers sensor properties, signal processing, noise system, and instrumentation. The numerical results show the behavior of resolution vs. signal-to-noise ratio. From our results, the Fabry-Perot sensor has high resolution and low resolution. Both resolutions are conceivable because the Fourier Domain Phase Analysis (FDPA) algorithm elaborates two evaluations of Bragg wavelength shift.

A high resolution cavity BPM for the CLIC Test Facility

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chritin, N.; Schmickler, H.; Soby, L.

2010-08-01

In frame of the development of a high resolution BPM system for the CLIC Main Linac we present the design of a cavity BPM prototype. It consists of a waveguide loaded dipole mode resonator and a monopole mode reference cavity, both operating at 15 GHz, to be compatible with the bunch frequencies at the CLIC Test Facility. Requirements, design concept, numerical analysis, and practical considerations are discussed.

High spatial resolution passive microwave sounding systems

NASA Technical Reports Server (NTRS)

Staelin, D. H.; Rosenkranz, P. W.; Bonanni, P. G.; Gasiewski, A. W.

1986-01-01

Two extensive series of flights aboard the ER-2 aircraft were conducted with the MIT 118 GHz imaging spectrometer together with a 53.6 GHz nadir channel and a TV camera record of the mission. Other microwave sensors, including a 183 GHz imaging spectrometer were flown simultaneously by other research groups. Work also continued on evaluating the impact of high-resolution passive microwave soundings upon numerical weather prediction models.

Resolving the fine-scale structure in turbulent Rayleigh-Bénard convection

NASA Astrophysics Data System (ADS)

Scheel, Janet D.; Emran, Mohammad S.; Schumacher, Jörg

2013-11-01

We present high-resolution direct numerical simulation studies of turbulent Rayleigh-Bénard convection in a closed cylindrical cell with an aspect ratio of one. The focus of our analysis is on the finest scales of convective turbulence, in particular the statistics of the kinetic energy and thermal dissipation rates in the bulk and the whole cell. The fluctuations of the energy dissipation field can directly be translated into a fluctuating local dissipation scale which is found to develop ever finer fluctuations with increasing Rayleigh number. The range of these scales as well as the probability of high-amplitude dissipation events decreases with increasing Prandtl number. In addition, we examine the joint statistics of the two dissipation fields and the consequences of high-amplitude events. We have also investigated the convergence properties of our spectral element method and have found that both dissipation fields are very sensitive to insufficient resolution. We demonstrate that global transport properties, such as the Nusselt number, and the energy balances are partly insensitive to insufficient resolution and yield correct results even when the dissipation fields are under-resolved. Our present numerical framework is also compared with high-resolution simulations which use a finite difference method. For most of the compared quantities the agreement is found to be satisfactory.

Numerical dispersion compensation for Partial Coherence Interferometry and Optical Coherence Tomography.

PubMed

Fercher, A; Hitzenberger, C; Sticker, M; Zawadzki, R; Karamata, B; Lasser, T

2001-12-03

Dispersive samples introduce a wavelength dependent phase distortion to the probe beam. This leads to a noticeable loss of depth resolution in high resolution OCT using broadband light sources. The standard technique to avoid this consequence is to balance the dispersion of the sample byarrangingadispersive materialinthereference arm. However, the impact of dispersion is depth dependent. A corresponding depth dependent dispersion balancing technique is diffcult to implement. Here we present a numerical dispersion compensation technique for Partial Coherence Interferometry (PCI) and Optical Coherence Tomography (OCT) based on numerical correlation of the depth scan signal with a depth variant kernel. It can be used a posteriori and provides depth dependent dispersion compensation. Examples of dispersion compensated depth scan signals obtained from microscope cover glasses are presented.

NUMERICAL SIMULATIONS OF CORONAL HEATING THROUGH FOOTPOINT BRAIDING

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hansteen, V.; Pontieu, B. De; Carlsson, M.

2015-10-01

Advanced three-dimensional (3D) radiative MHD simulations now reproduce many properties of the outer solar atmosphere. When including a domain from the convection zone into the corona, a hot chromosphere and corona are self-consistently maintained. Here we study two realistic models, with different simulated areas, magnetic field strength and topology, and numerical resolution. These are compared in order to characterize the heating in the 3D-MHD simulations which self-consistently maintains the structure of the atmosphere. We analyze the heating at both large and small scales and find that heating is episodic and highly structured in space, but occurs along loop-shaped structures, andmore » moves along with the magnetic field. On large scales we find that the heating per particle is maximal near the transition region and that widely distributed opposite-polarity field in the photosphere leads to a greater heating scale height in the corona. On smaller scales, heating is concentrated in current sheets, the thicknesses of which are set by the numerical resolution. Some current sheets fragment in time, this process occurring more readily in the higher-resolution model leading to spatially highly intermittent heating. The large-scale heating structures are found to fade in less than about five minutes, while the smaller, local, heating shows timescales of the order of two minutes in one model and one minutes in the other, higher-resolution, model.« less

Numerical Hydrodynamics in Special Relativity.

PubMed

Martí, J M; Müller, E

1999-01-01

This review is concerned with a discussion of numerical methods for the solution of the equations of special relativistic hydrodynamics (SRHD). Particular emphasis is put on a comprehensive review of the application of high-resolution shock-capturing methods in SRHD. Results obtained with different numerical SRHD methods are compared, and two astrophysical applications of SRHD flows are discussed. An evaluation of the various numerical methods is given and future developments are analyzed. Supplementary material is available for this article at 10.12942/lrr-1999-3.

Benchmarking urban flood models of varying complexity and scale using high resolution terrestrial LiDAR data

NASA Astrophysics Data System (ADS)

Fewtrell, Timothy J.; Duncan, Alastair; Sampson, Christopher C.; Neal, Jeffrey C.; Bates, Paul D.

2011-01-01

This paper describes benchmark testing of a diffusive and an inertial formulation of the de St. Venant equations implemented within the LISFLOOD-FP hydraulic model using high resolution terrestrial LiDAR data. The models are applied to a hypothetical flooding scenario in a section of Alcester, UK which experienced significant surface water flooding in the June and July floods of 2007 in the UK. The sensitivity of water elevation and velocity simulations to model formulation and grid resolution are analyzed. The differences in depth and velocity estimates between the diffusive and inertial approximations are within 10% of the simulated value but inertial effects persist at the wetting front in steep catchments. Both models portray a similar scale dependency between 50 cm and 5 m resolution which reiterates previous findings that errors in coarse scale topographic data sets are significantly larger than differences between numerical approximations. In particular, these results confirm the need to distinctly represent the camber and curbs of roads in the numerical grid when simulating surface water flooding events. Furthermore, although water depth estimates at grid scales coarser than 1 m appear robust, velocity estimates at these scales seem to be inconsistent compared to the 50 cm benchmark. The inertial formulation is shown to reduce computational cost by up to three orders of magnitude at high resolutions thus making simulations at this scale viable in practice compared to diffusive models. For the first time, this paper highlights the utility of high resolution terrestrial LiDAR data to inform small-scale flood risk management studies.

Identification of overlapping communities and their hierarchy by locally calculating community-changing resolution levels

NASA Astrophysics Data System (ADS)

Havemann, Frank; Heinz, Michael; Struck, Alexander; Gläser, Jochen

2011-01-01

We propose a new local, deterministic and parameter-free algorithm that detects fuzzy and crisp overlapping communities in a weighted network and simultaneously reveals their hierarchy. Using a local fitness function, the algorithm greedily expands natural communities of seeds until the whole graph is covered. The hierarchy of communities is obtained analytically by calculating resolution levels at which communities grow rather than numerically by testing different resolution levels. This analytic procedure is not only more exact than its numerical alternatives such as LFM and GCE but also much faster. Critical resolution levels can be identified by searching for intervals in which large changes of the resolution do not lead to growth of communities. We tested our algorithm on benchmark graphs and on a network of 492 papers in information science. Combined with a specific post-processing, the algorithm gives much more precise results on LFR benchmarks with high overlap compared to other algorithms and performs very similarly to GCE.

Relationship between perception of image resolution and peripheral visual field in stereoscopic images

NASA Astrophysics Data System (ADS)

Ogawa, Masahiko; Shidoji, Kazunori

2011-03-01

High-resolution stereoscopic images are effective for use in virtual reality and teleoperation systems. However, the higher the image resolution, the higher is the cost of computer processing and communication. To reduce this cost, numerous earlier studies have suggested the use of multi-resolution images, which have high resolution in region of interests and low resolution in other areas. However, observers can perceive unpleasant sensations and incorrect depth because they can see low-resolution areas in their field of vision. In this study, we conducted an experiment to research the relationship between the viewing field and the perception of image resolution, and determined respective thresholds of image-resolution perception for various positions of the viewing field. The results showed that participants could not distinguish between the high-resolution stimulus and the decreased stimulus, 63 ppi, at positions more than 8 deg outside the gaze point. Moreover, with positions shifted a further 11 and 13 deg from the gaze point, participants could not distinguish between the high-resolution stimulus and the decreased stimuli whose resolution densities were 42 and 25 ppi. Hence, we will propose the composition of multi-resolution images in which observers do not perceive unpleasant sensations and incorrect depth with data reduction (compression).

Optical path difference microscopy with a Shack-Hartmann wavefront sensor.

PubMed

Gong, Hai; Agbana, Temitope E; Pozzi, Paolo; Soloviev, Oleg; Verhaegen, Michel; Vdovin, Gleb

2017-06-01

In this Letter, we show that a Shack-Hartmann wavefront sensor can be used for the quantitative measurement of the specimen optical path difference (OPD) in an ordinary incoherent optical microscope, if the spatial coherence of the illumination light in the plane of the specimen is larger than the microscope resolution. To satisfy this condition, the illumination numerical aperture should be smaller than the numerical aperture of the imaging lens. This principle has been successfully applied to build a high-resolution reference-free instrument for the characterization of the OPD of micro-optical components and microscopic biological samples.

Convergence and divergence in spherical harmonic series of the gravitational field generated by high-resolution planetary topography—A case study for the Moon

NASA Astrophysics Data System (ADS)

Hirt, Christian; Kuhn, Michael

2017-08-01

Theoretically, spherical harmonic (SH) series expansions of the external gravitational potential are guaranteed to converge outside the Brillouin sphere enclosing all field-generating masses. Inside that sphere, the series may be convergent or may be divergent. The series convergence behavior is a highly unstable quantity that is little studied for high-resolution mass distributions. Here we shed light on the behavior of SH series expansions of the gravitational potential of the Moon. We present a set of systematic numerical experiments where the gravity field generated by the topographic masses is forward-modeled in spherical harmonics and with numerical integration techniques at various heights and different levels of resolution, increasing from harmonic degree 90 to 2160 ( 61 to 2.5 km scales). The numerical integration is free from any divergence issues and therefore suitable to reliably assess convergence versus divergence of the SH series. Our experiments provide unprecedented detailed insights into the divergence issue. We show that the SH gravity field of degree-180 topography is convergent anywhere in free space. When the resolution of the topographic mass model is increased to degree 360, divergence starts to affect very high degree gravity signals over regions deep inside the Brillouin sphere. For degree 2160 topography/gravity models, severe divergence (with several 1000 mGal amplitudes) prohibits accurate gravity modeling over most of the topography. As a key result, we formulate a new hypothesis to predict divergence: if the potential degree variances show a minimum, then the SH series expansions diverge somewhere inside the Brillouin sphere and modeling of the internal potential becomes relevant.

Computer programs to assist in high resolution thermal denaturation and circular dichroism studies on nucleic acids

PubMed Central

Goodman, Thomas C.; Hardies, Stephen C.; Cortez, Carlos; Hillen, Wolfgang

1981-01-01

Computer programs are described that direct the collection, processing, and graphical display of numerical data obtained from high resolution thermal denaturation (1-3) and circular dichroism (4) studies. Besides these specific applications, the programs may also be useful, either directly or as programming models, in other types of spectrophotometric studies employing computers, programming languages, or instruments similar to those described here (see Materials and Methods). PMID:7335498

A time-accurate high-resolution TVD scheme for solving the Navier-Stokes equations

NASA Technical Reports Server (NTRS)

Kim, Hyun Dae; Liu, Nan-Suey

1992-01-01

A total variation diminishing (TVD) scheme has been developed and incorporated into an existing time-accurate high-resolution Navier-Stokes code. The accuracy and the robustness of the resulting solution procedure have been assessed by performing many calculations in four different areas: shock tube flows, regular shock reflection, supersonic boundary layer, and shock boundary layer interactions. These numerical results compare well with corresponding exact solutions or experimental data.

The AGORA High-resolution Galaxy Simulations Comparison Project II: Isolated disk test

DOE PAGES

Kim, Ji-hoon; Agertz, Oscar; Teyssier, Romain; ...

2016-12-20

Using an isolated Milky Way-mass galaxy simulation, we compare results from 9 state-of-the-art gravito-hydrodynamics codes widely used in the numerical community. We utilize the infrastructure we have built for the AGORA High-resolution Galaxy Simulations Comparison Project. This includes the common disk initial conditions, common physics models (e.g., radiative cooling and UV background by the standardized package Grackle) and common analysis toolkit yt, all of which are publicly available. Subgrid physics models such as Jeans pressure floor, star formation, supernova feedback energy, and metal production are carefully constrained across code platforms. With numerical accuracy that resolves the disk scale height, wemore » find that the codes overall agree well with one another in many dimensions including: gas and stellar surface densities, rotation curves, velocity dispersions, density and temperature distribution functions, disk vertical heights, stellar clumps, star formation rates, and Kennicutt-Schmidt relations. Quantities such as velocity dispersions are very robust (agreement within a few tens of percent at all radii) while measures like newly-formed stellar clump mass functions show more significant variation (difference by up to a factor of ~3). Systematic differences exist, for example, between mesh-based and particle-based codes in the low density region, and between more diffusive and less diffusive schemes in the high density tail of the density distribution. Yet intrinsic code differences are generally small compared to the variations in numerical implementations of the common subgrid physics such as supernova feedback. Lastly, our experiment reassures that, if adequately designed in accordance with our proposed common parameters, results of a modern high-resolution galaxy formation simulation are more sensitive to input physics than to intrinsic differences in numerical schemes.« less

The AGORA High-resolution Galaxy Simulations Comparison Project II: Isolated disk test

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Ji-hoon; Agertz, Oscar; Teyssier, Romain

Using an isolated Milky Way-mass galaxy simulation, we compare results from 9 state-of-the-art gravito-hydrodynamics codes widely used in the numerical community. We utilize the infrastructure we have built for the AGORA High-resolution Galaxy Simulations Comparison Project. This includes the common disk initial conditions, common physics models (e.g., radiative cooling and UV background by the standardized package Grackle) and common analysis toolkit yt, all of which are publicly available. Subgrid physics models such as Jeans pressure floor, star formation, supernova feedback energy, and metal production are carefully constrained across code platforms. With numerical accuracy that resolves the disk scale height, wemore » find that the codes overall agree well with one another in many dimensions including: gas and stellar surface densities, rotation curves, velocity dispersions, density and temperature distribution functions, disk vertical heights, stellar clumps, star formation rates, and Kennicutt-Schmidt relations. Quantities such as velocity dispersions are very robust (agreement within a few tens of percent at all radii) while measures like newly-formed stellar clump mass functions show more significant variation (difference by up to a factor of ~3). Systematic differences exist, for example, between mesh-based and particle-based codes in the low density region, and between more diffusive and less diffusive schemes in the high density tail of the density distribution. Yet intrinsic code differences are generally small compared to the variations in numerical implementations of the common subgrid physics such as supernova feedback. Lastly, our experiment reassures that, if adequately designed in accordance with our proposed common parameters, results of a modern high-resolution galaxy formation simulation are more sensitive to input physics than to intrinsic differences in numerical schemes.« less

THE AGORA HIGH-RESOLUTION GALAXY SIMULATIONS COMPARISON PROJECT. II. ISOLATED DISK TEST

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Ji-hoon; Agertz, Oscar; Teyssier, Romain

Using an isolated Milky Way-mass galaxy simulation, we compare results from nine state-of-the-art gravito-hydrodynamics codes widely used in the numerical community. We utilize the infrastructure we have built for the AGORA High-resolution Galaxy Simulations Comparison Project. This includes the common disk initial conditions, common physics models (e.g., radiative cooling and UV background by the standardized package Grackle) and common analysis toolkit yt, all of which are publicly available. Subgrid physics models such as Jeans pressure floor, star formation, supernova feedback energy, and metal production are carefully constrained across code platforms. With numerical accuracy that resolves the disk scale height, wemore » find that the codes overall agree well with one another in many dimensions including: gas and stellar surface densities, rotation curves, velocity dispersions, density and temperature distribution functions, disk vertical heights, stellar clumps, star formation rates, and Kennicutt–Schmidt relations. Quantities such as velocity dispersions are very robust (agreement within a few tens of percent at all radii) while measures like newly formed stellar clump mass functions show more significant variation (difference by up to a factor of ∼3). Systematic differences exist, for example, between mesh-based and particle-based codes in the low-density region, and between more diffusive and less diffusive schemes in the high-density tail of the density distribution. Yet intrinsic code differences are generally small compared to the variations in numerical implementations of the common subgrid physics such as supernova feedback. Our experiment reassures that, if adequately designed in accordance with our proposed common parameters, results of a modern high-resolution galaxy formation simulation are more sensitive to input physics than to intrinsic differences in numerical schemes.« less

A study on the behaviour of high-order flux reconstruction method with different low-dissipation numerical fluxes for large eddy simulation

NASA Astrophysics Data System (ADS)

Boxi, Lin; Chao, Yan; Shusheng, Chen

2017-10-01

This work focuses on the numerical dissipation features of high-order flux reconstruction (FR) method combined with different numerical fluxes in turbulence flows. The famous Roe and AUSM+ numerical fluxes together with their corresponding low-dissipation enhanced versions (LMRoe, SLAU2) and higher resolution variants (HR-LMRoe, HR-SLAU2) are incorporated into FR framework, and the dissipation interplay of these combinations is investigated in implicit large eddy simulation. The numerical dissipation stemming from these convective numerical fluxes is quantified by simulating the inviscid Gresho vortex, the transitional Taylor-Green vortex and the homogenous decaying isotropic turbulence. The results suggest that low-dissipation enhanced versions are preferential both in high-order and low-order cases to their original forms, while the use of HR-SLAU2 has marginal improvements and the HR-LMRoe leads to degenerated solution with high-order. In high-order the effects of numerical fluxes are reduced, and their viscosity may not be dissipative enough to provide physically consistent turbulence when under-resolved.

Ultra high energy resolution focusing monochromator for inelastic X-ray scattering spectrometer

DOE PAGES

Suvorov, Alexey; Cunsolo, Alessandro; Chubar, Oleg; ...

2015-11-25

Further development of a focusing monochromator concept for X-ray energy resolution of 0.1 meV and below is presented. Theoretical analysis of several optical layouts based on this concept was supported by numerical simulations performed in the “Synchrotron Radiation Workshop” software package using the physical-optics approach and careful modeling of partially-coherent synchrotron (undulator) radiation. Along with the energy resolution, the spectral shape of the energy resolution function was investigated. We show that under certain conditions the decay of the resolution function tails can be faster than that of the Gaussian function.

Model validation and error estimation of tsunami runup using high resolution data in Sadeng Port, Gunungkidul, Yogyakarta

NASA Astrophysics Data System (ADS)

Basith, Abdul; Prakoso, Yudhono; Kongko, Widjo

2017-07-01

A tsunami model using high resolution geometric data is indispensable in efforts to tsunami mitigation, especially in tsunami prone areas. It is one of the factors that affect the accuracy results of numerical modeling of tsunami. Sadeng Port is a new infrastructure in the Southern Coast of Java which could potentially hit by massive tsunami from seismic gap. This paper discusses validation and error estimation of tsunami model created using high resolution geometric data in Sadeng Port. Tsunami model validation uses the height wave of Tsunami Pangandaran 2006 recorded by Tide Gauge of Sadeng. Tsunami model will be used to accommodate the tsunami numerical modeling involves the parameters of earthquake-tsunami which is derived from the seismic gap. The validation results using t-test (student) shows that the height of the tsunami modeling results and observation in Tide Gauge of Sadeng are considered statistically equal at 95% confidence level and the value of the RMSE and NRMSE are 0.428 m and 22.12%, while the differences of tsunami wave travel time is 12 minutes.

Wavelet-based Adaptive Mesh Refinement Method for Global Atmospheric Chemical Transport Modeling

NASA Astrophysics Data System (ADS)

Rastigejev, Y.

2011-12-01

Numerical modeling of global atmospheric chemical transport presents enormous computational difficulties, associated with simulating a wide range of time and spatial scales. The described difficulties are exacerbated by the fact that hundreds of chemical species and thousands of chemical reactions typically are used for chemical kinetic mechanism description. These computational requirements very often forces researches to use relatively crude quasi-uniform numerical grids with inadequate spatial resolution that introduces significant numerical diffusion into the system. It was shown that this spurious diffusion significantly distorts the pollutant mixing and transport dynamics for typically used grid resolution. The described numerical difficulties have to be systematically addressed considering that the demand for fast, high-resolution chemical transport models will be exacerbated over the next decade by the need to interpret satellite observations of tropospheric ozone and related species. In this study we offer dynamically adaptive multilevel Wavelet-based Adaptive Mesh Refinement (WAMR) method for numerical modeling of atmospheric chemical evolution equations. The adaptive mesh refinement is performed by adding and removing finer levels of resolution in the locations of fine scale development and in the locations of smooth solution behavior accordingly. The algorithm is based on the mathematically well established wavelet theory. This allows us to provide error estimates of the solution that are used in conjunction with an appropriate threshold criteria to adapt the non-uniform grid. Other essential features of the numerical algorithm include: an efficient wavelet spatial discretization that allows to minimize the number of degrees of freedom for a prescribed accuracy, a fast algorithm for computing wavelet amplitudes, and efficient and accurate derivative approximations on an irregular grid. The method has been tested for a variety of benchmark problems including numerical simulation of transpacific traveling pollution plumes. The generated pollution plumes are diluted due to turbulent mixing as they are advected downwind. Despite this dilution, it was recently discovered that pollution plumes in the remote troposphere can preserve their identity as well-defined structures for two weeks or more as they circle the globe. Present Global Chemical Transport Models (CTMs) implemented for quasi-uniform grids are completely incapable of reproducing these layered structures due to high numerical plume dilution caused by numerical diffusion combined with non-uniformity of atmospheric flow. It is shown that WAMR algorithm solutions of comparable accuracy as conventional numerical techniques are obtained with more than an order of magnitude reduction in number of grid points, therefore the adaptive algorithm is capable to produce accurate results at a relatively low computational cost. The numerical simulations demonstrate that WAMR algorithm applied the traveling plume problem accurately reproduces the plume dynamics unlike conventional numerical methods that utilizes quasi-uniform numerical grids.

Mesosacle eddies in a high resolution OGCM and coupled ocean-atmosphere GCM

NASA Astrophysics Data System (ADS)

Yu, Y.; Liu, H.; Lin, P.

2017-12-01

The present study described high-resolution climate modeling efforts including oceanic, atmospheric and coupled general circulation model (GCM) at the state key laboratory of numerical modeling for atmospheric sciences and geophysical fluid dynamics (LASG), Institute of Atmospheric Physics (IAP). The high-resolution OGCM is established based on the latest version of the LASG/IAP Climate system Ocean Model (LICOM2.1), but its horizontal resolution and vertical resolution are increased to 1/10° and 55 layers, respectively. Forced by the surface fluxes from the reanalysis and observed data, the model has been integrated for approximately more than 80 model years. Compared with the simulation of the coarse-resolution OGCM, the eddy-resolving OGCM not only better simulates the spatial-temporal features of mesoscale eddies and the paths and positions of western boundary currents but also reproduces the large meander of the Kuroshio Current and its interannual variability. Another aspect, namely, the complex structures of equatorial Pacific currents and currents in the coastal ocean of China, are better captured due to the increased horizontal and vertical resolution. Then we coupled the high resolution OGCM to NCAR CAM4 with 25km resolution, in which the mesoscale air-sea interaction processes are better captured.

Micro-computed tomography pore-scale study of flow in porous media: Effect of voxel resolution

NASA Astrophysics Data System (ADS)

Shah, S. M.; Gray, F.; Crawshaw, J. P.; Boek, E. S.

2016-09-01

A fundamental understanding of flow in porous media at the pore-scale is necessary to be able to upscale average displacement processes from core to reservoir scale. The study of fluid flow in porous media at the pore-scale consists of two key procedures: Imaging - reconstruction of three-dimensional (3D) pore space images; and modelling such as with single and two-phase flow simulations with Lattice-Boltzmann (LB) or Pore-Network (PN) Modelling. Here we analyse pore-scale results to predict petrophysical properties such as porosity, single-phase permeability and multi-phase properties at different length scales. The fundamental issue is to understand the image resolution dependency of transport properties, in order to up-scale the flow physics from pore to core scale. In this work, we use a high resolution micro-computed tomography (micro-CT) scanner to image and reconstruct three dimensional pore-scale images of five sandstones (Bentheimer, Berea, Clashach, Doddington and Stainton) and five complex carbonates (Ketton, Estaillades, Middle Eastern sample 3, Middle Eastern sample 5 and Indiana Limestone 1) at four different voxel resolutions (4.4 μm, 6.2 μm, 8.3 μm and 10.2 μm), scanning the same physical field of view. Implementing three phase segmentation (macro-pore phase, intermediate phase and grain phase) on pore-scale images helps to understand the importance of connected macro-porosity in the fluid flow for the samples studied. We then compute the petrophysical properties for all the samples using PN and LB simulations in order to study the influence of voxel resolution on petrophysical properties. We then introduce a numerical coarsening scheme which is used to coarsen a high voxel resolution image (4.4 μm) to lower resolutions (6.2 μm, 8.3 μm and 10.2 μm) and study the impact of coarsening data on macroscopic and multi-phase properties. Numerical coarsening of high resolution data is found to be superior to using a lower resolution scan because it avoids the problem of partial volume effects and reduces the scaling effect by preserving the pore-space properties influencing the transport properties. This is evidently compared in this study by predicting several pore network properties such as number of pores and throats, average pore and throat radius and coordination number for both scan based analysis and numerical coarsened data.

LITE microscopy: Tilted light-sheet excitation of model organisms offers high resolution and low photobleaching

PubMed Central

Gerbich, Therese M.; Rana, Kishan; Suzuki, Aussie; Schaefer, Kristina N.; Heppert, Jennifer K.; Boothby, Thomas C.; Allbritton, Nancy L.; Gladfelter, Amy S.; Maddox, Amy S.

2018-01-01

Fluorescence microscopy is a powerful approach for studying subcellular dynamics at high spatiotemporal resolution; however, conventional fluorescence microscopy techniques are light-intensive and introduce unnecessary photodamage. Light-sheet fluorescence microscopy (LSFM) mitigates these problems by selectively illuminating the focal plane of the detection objective by using orthogonal excitation. Orthogonal excitation requires geometries that physically limit the detection objective numerical aperture (NA), thereby limiting both light-gathering efficiency (brightness) and native spatial resolution. We present a novel live-cell LSFM method, lateral interference tilted excitation (LITE), in which a tilted light sheet illuminates the detection objective focal plane without a sterically limiting illumination scheme. LITE is thus compatible with any detection objective, including oil immersion, without an upper NA limit. LITE combines the low photodamage of LSFM with high resolution, high brightness, and coverslip-based objectives. We demonstrate the utility of LITE for imaging animal, fungal, and plant model organisms over many hours at high spatiotemporal resolution. PMID:29490939

Towards a microchannel-based X-ray detector with two-dimensional spatial and time resolution and high dynamic range

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adams, Bernhard W.; Mane, Anil U.; Elam, Jeffrey W.

X-ray detectors that combine two-dimensional spatial resolution with a high time resolution are needed in numerous applications of synchrotron radiation. Most detectors with this combination of capabilities are based on semiconductor technology and are therefore limited in size. Furthermore, the time resolution is often realised through rapid time-gating of the acquisition, followed by a slower readout. Here, a detector technology is realised based on relatively inexpensive microchannel plates that uses GHz waveform sampling for a millimeter-scale spatial resolution and better than 100 ps time resolution. The technology is capable of continuous streaming of time- and location-tagged events at rates greatermore » than 10 7events per cm 2. Time-gating can be used for improved dynamic range.« less

Three-Dimensional Imaging and Numerical Reconstruction of Graphite/Epoxy Composite Microstructure Based on Ultra-High Resolution X-Ray Computed Tomography

NASA Technical Reports Server (NTRS)

Czabaj, M. W.; Riccio, M. L.; Whitacre, W. W.

2014-01-01

A combined experimental and computational study aimed at high-resolution 3D imaging, visualization, and numerical reconstruction of fiber-reinforced polymer microstructures at the fiber length scale is presented. To this end, a sample of graphite/epoxy composite was imaged at sub-micron resolution using a 3D X-ray computed tomography microscope. Next, a novel segmentation algorithm was developed, based on concepts adopted from computer vision and multi-target tracking, to detect and estimate, with high accuracy, the position of individual fibers in a volume of the imaged composite. In the current implementation, the segmentation algorithm was based on Global Nearest Neighbor data-association architecture, a Kalman filter estimator, and several novel algorithms for virtualfiber stitching, smoothing, and overlap removal. The segmentation algorithm was used on a sub-volume of the imaged composite, detecting 508 individual fibers. The segmentation data were qualitatively compared to the tomographic data, demonstrating high accuracy of the numerical reconstruction. Moreover, the data were used to quantify a) the relative distribution of individual-fiber cross sections within the imaged sub-volume, and b) the local fiber misorientation relative to the global fiber axis. Finally, the segmentation data were converted using commercially available finite element (FE) software to generate a detailed FE mesh of the composite volume. The methodology described herein demonstrates the feasibility of realizing an FE-based, virtual-testing framework for graphite/fiber composites at the constituent level.

Super-resolution differential interference contrast microscopy by structured illumination.

PubMed

Chen, Jianling; Xu, Yan; Lv, Xiaohua; Lai, Xiaomin; Zeng, Shaoqun

2013-01-14

We propose a structured illumination differential interference contrast (SI-DIC) microscopy, breaking the diffraction resolution limit of differential interference contrast (DIC) microscopy. SI-DIC extends the bandwidth of coherent transfer function of the DIC imaging system, thus the resolution is improved. With 0.8 numerical aperture condenser and objective, the reconstructed SI-DIC image of 53 nm polystyrene beads reveals lateral resolution of approximately 190 nm, doubling that of the conventional DIC image. We also demonstrate biological observations of label-free cells with improved spatial resolution. The SI-DIC microscopy can provide sub-diffraction resolution and high contrast images with marker-free specimens, and has the potential for achieving sub-diffraction resolution quantitative phase imaging.

Focusing and imaging with increased numerical apertures through multimode fibers with micro-fabricated optics.

PubMed

Bianchi, S; Rajamanickam, V P; Ferrara, L; Di Fabrizio, E; Liberale, C; Di Leonardo, R

2013-12-01

The use of individual multimode optical fibers in endoscopy applications has the potential to provide highly miniaturized and noninvasive probes for microscopy and optical micromanipulation. A few different strategies have been proposed recently, but they all suffer from intrinsically low resolution related to the low numerical aperture of multimode fibers. Here, we show that two-photon polymerization allows for direct fabrication of micro-optics components on the fiber end, resulting in an increase of the numerical aperture to a value that is close to 1. Coupling light into the fiber through a spatial light modulator, we were able to optically scan a submicrometer spot (300 nm FWHM) over an extended region, facing the opposite fiber end. Fluorescence imaging with improved resolution is also demonstrated.

Numerical Simulations of Multidimensional Flows in Presence of either Strong Shocks or Strong Gravitational Fields

NASA Astrophysics Data System (ADS)

Font, J. A.; Ibanez, J. M.; Marti, J. M.

1993-04-01

Some numerical solutions via local characteristic approach have been obtained describing multidimensional flows. These solutions have been used as tests of a two- dimensional code which extends some high-resolution shock-captunng methods, designed recently to solve nonlinear hyperbolic systems of conservation laws. K words: HYDRODYNAMICS - BLACK HOLE - RELATIVITY - SHOCK WAVES

Tropical cyclones over the North Indian Ocean: experiments with the high-resolution global icosahedral grid point model GME

NASA Astrophysics Data System (ADS)

Kumkar, Yogesh V.; Sen, P. N.; Chaudhari, Hemankumar S.; Oh, Jai-Ho

2018-02-01

In this paper, an attempt has been made to conduct a numerical experiment with the high-resolution global model GME to predict the tropical storms in the North Indian Ocean during the year 2007. Numerical integrations using the icosahedral hexagonal grid point global model GME were performed to study the evolution of tropical cyclones, viz., Akash, Gonu, Yemyin and Sidr over North Indian Ocean during 2007. It has been seen that the GME model forecast underestimates cyclone's intensity, but the model can capture the evolution of cyclone's intensity especially its weakening during landfall, which is primarily due to the cutoff of the water vapor supply in the boundary layer as cyclones approach the coastal region. A series of numerical simulation of tropical cyclones have been performed with GME to examine model capability in prediction of intensity and track of the cyclones. The model performance is evaluated by calculating the root mean square errors as cyclone track errors.

Validating high-resolution California coastal flood modeling with Uninhabited Aerial Vehicle Synthetic Aperture Radar (UAVSAR)

NASA Astrophysics Data System (ADS)

O'Neill, A.

2015-12-01

The Coastal Storm Modeling System (CoSMoS) is a numerical modeling scheme used to predict coastal flooding due to sea level rise and storms influenced by climate change, currently in use in central California and in development for Southern California (Pt. Conception to the Mexican border). Using a framework of circulation, wave, analytical, and Bayesian models at different geographic scales, high-resolution results are translated as relevant hazards projections at the local scale that include flooding, wave heights, coastal erosion, shoreline change, and cliff failures. Ready access to accurate, high-resolution coastal flooding data is critical for further validation and refinement of CoSMoS and improved coastal hazard projections. High-resolution Uninhabited Aerial Vehicle Synthetic Aperture Radar (UAVSAR) provides an exceptional data source as appropriately-timed flights during extreme tides or storms provide a geographically-extensive method for determining areas of inundation and flooding extent along expanses of complex and varying coastline. Landward flood extents are numerically identified via edge-detection in imagery from single flights, and can also be ascertained via change detection using additional flights and imagery collected during average wave/tide conditions. The extracted flooding positions are compared against CoSMoS results for similar tide, water level, and storm-intensity conditions, allowing for robust testing and validation of CoSMoS and providing essential feedback for supporting regional and local model improvement.

Non-oscillatory central differencing for hyperbolic conservation laws

NASA Technical Reports Server (NTRS)

Nessyahu, Haim; Tadmor, Eitan

1988-01-01

Many of the recently developed high resolution schemes for hyperbolic conservation laws are based on upwind differencing. The building block for these schemes is the averaging of an appropriate Godunov solver; its time consuming part involves the field-by-field decomposition which is required in order to identify the direction of the wind. Instead, the use of the more robust Lax-Friedrichs (LxF) solver is proposed. The main advantage is simplicity: no Riemann problems are solved and hence field-by-field decompositions are avoided. The main disadvantage is the excessive numerical viscosity typical to the LxF solver. This is compensated for by using high-resolution MUSCL-type interpolants. Numerical experiments show that the quality of results obtained by such convenient central differencing is comparable with those of the upwind schemes.

Transitional hemodynamics in intracranial aneurysms - Comparative velocity investigations with high resolution lattice Boltzmann simulations, normal resolution ANSYS simulations, and MR imaging.

PubMed

Jain, Kartik; Jiang, Jingfeng; Strother, Charles; Mardal, Kent-André

2016-11-01

Blood flow in intracranial aneurysms has, until recently, been considered to be disturbed but still laminar. Recent high resolution computational studies have demonstrated, in some situations, however, that the flow may exhibit high frequency fluctuations that resemble weakly turbulent or transitional flow. Due to numerous assumptions required for simplification in computational fluid dynamics (CFD) studies, the occurrence of these events, in vivo, remains unsettled. The detection of these fluctuations in aneurysmal blood flow, i.e., hemodynamics by CFD, poses additional challenges as such phenomena cannot be captured in clinical data acquisition with magnetic resonance (MR) due to inadequate temporal and spatial resolutions. The authors' purpose was to address this issue by comparing results from highly resolved simulations, conventional resolution laminar simulations, and MR measurements, identify the differences, and identify their causes. Two aneurysms in the basilar artery, one with disturbed yet laminar flow and the other with transitional flow, were chosen. One set of highly resolved direct numerical simulations using the lattice Boltzmann method (LBM) and another with adequate resolutions under laminar flow assumption were conducted using a commercially available ANSYS Fluent solver. The velocity fields obtained from simulation results were qualitatively and statistically compared against each other and with MR acquisition. Results from LBM, ANSYS Fluent, and MR agree well qualitatively and quantitatively for one of the aneurysms with laminar flow in which fluctuations were <80 Hz. The comparisons for the second aneurysm with high fluctuations of > ∼ 600 Hz showed vivid differences between LBM, ANSYS Fluent, and magnetic resonance imaging. After ensemble averaging and down-sampling to coarser space and time scales, these differences became minimal. A combination of MR derived data and CFD can be helpful in estimating the hemodynamic environment of intracranial aneurysms. Adequately resolved CFD would suffice gross assessment of hemodynamics, potentially in a clinical setting, and highly resolved CFD could be helpful in a detailed and retrospective understanding of the physiological mechanisms.

Resolution requirements for numerical simulations of transition

NASA Technical Reports Server (NTRS)

Zang, Thomas A.; Krist, Steven E.; Hussaini, M. Yousuff

1989-01-01

The resolution requirements for direct numerical simulations of transition to turbulence are investigated. A reliable resolution criterion is determined from the results of several detailed simulations of channel and boundary-layer transition.

Recent advances in flexible low power cholesteric LCDs

NASA Astrophysics Data System (ADS)

Khan, Asad; Shiyanovskaya, Irina; Montbach, Erica; Schneider, Tod; Nicholson, Forrest; Miller, Nick; Marhefka, Duane; Ernst, Todd; Doane, J. W.

2006-05-01

Bistable reflective cholesteric displays are a liquid crystal display technology developed to fill a market need for very low power displays. Their unique look, high reflectivity, bistability, and simple structure make them an ideal flat panel display choice for handheld or other portable devices where small lightweight batteries with long lifetimes are important. Applications ranging from low resolution large signs to ultra high resolution electronic books can utilize cholesteric displays to not only benefit from the numerous features, but also create enabling features that other flat panel display technologies cannot. Flexible displays are the focus of attention of numerous research groups and corporations worldwide. Cholesteric displays have been demonstrated to be highly amenable to flexible substrates. This paper will review recent advances in flexible cholesteric displays including both phase separation and emulsification approaches to encapsulation. Both approaches provide unique benefits to various aspects of manufacturability, processes, flexibility, and conformability.

A high-resolution Godunov method for compressible multi-material flow on overlapping grids

NASA Astrophysics Data System (ADS)

Banks, J. W.; Schwendeman, D. W.; Kapila, A. K.; Henshaw, W. D.

2007-04-01

A numerical method is described for inviscid, compressible, multi-material flow in two space dimensions. The flow is governed by the multi-material Euler equations with a general mixture equation of state. Composite overlapping grids are used to handle complex flow geometry and block-structured adaptive mesh refinement (AMR) is used to locally increase grid resolution near shocks and material interfaces. The discretization of the governing equations is based on a high-resolution Godunov method, but includes an energy correction designed to suppress numerical errors that develop near a material interface for standard, conservative shock-capturing schemes. The energy correction is constructed based on a uniform-pressure-velocity flow and is significant only near the captured interface. A variety of two-material flows are presented to verify the accuracy of the numerical approach and to illustrate its use. These flows assume an equation of state for the mixture based on the Jones-Wilkins-Lee (JWL) forms for the components. This equation of state includes a mixture of ideal gases as a special case. Flow problems considered include unsteady one-dimensional shock-interface collision, steady interaction of a planar interface and an oblique shock, planar shock interaction with a collection of gas-filled cylindrical inhomogeneities, and the impulsive motion of the two-component mixture in a rigid cylindrical vessel.

Wide-aperture aspherical lens for high-resolution terahertz imaging

NASA Astrophysics Data System (ADS)

Chernomyrdin, Nikita V.; Frolov, Maxim E.; Lebedev, Sergey P.; Reshetov, Igor V.; Spektor, Igor E.; Tolstoguzov, Viktor L.; Karasik, Valeriy E.; Khorokhorov, Alexei M.; Koshelev, Kirill I.; Schadko, Aleksander O.; Yurchenko, Stanislav O.; Zaytsev, Kirill I.

2017-01-01

In this paper, we introduce wide-aperture aspherical lens for high-resolution terahertz (THz) imaging. The lens has been designed and analyzed by numerical methods of geometrical optics and electrodynamics. It has been made of high-density polyethylene by shaping at computer-controlled lathe and characterized using a continuous-wave THz imaging setup based on a backward-wave oscillator and Golay detector. The concept of image contrast has been implemented to estimate image quality. According to the experimental data, the lens allows resolving two points spaced at 0.95λ distance with a contrast of 15%. To highlight high resolution in the THz images, the wide-aperture lens has been employed for studying printed electronic circuit board containing sub-wavelength-scale elements. The observed results justify the high efficiency of the proposed lens design.

High-resolution seismic reflection profiling for mapping shallow aquifers in Lee County, Florida

USGS Publications Warehouse

Missimer, T.M.; Gardner, Richard Alfred

1976-01-01

High-resolution continuous seismic reflection profiling equipment was utilized to define the configuration of sedimentary layers underlying part of Lee County, Florida. About 45 miles (72 kilometers) of profile were made on the Caloosahatchee River Estuary and San Carlos Bay. Two different acoustic energy sources, a high resolution boomer and a 45-electrode high resolution sparker, both having a power input of 300 joules, were used to obtain both adequate penetration and good resolution. The seismic profiles show that much of the strata of middle Miocene to Holocene age apparently are extensively folded but not faulted. Initial interpretations indicate that: (1) the top of the Hawthorn Formation (which contains the upper Hawthorn aquifer) has much relief due chiefly to apparent folding; (2) the limestone, sandstone, and unconsolidated sand and phosphorite, which together compose the sandstone aquifer, appear to be discontinuous; (3) the green clay unit of the Tamiami Formation contains large scale angular beds dipping eastward; and (4) numerous deeply cut alluvium-filled paleochannels underlie the Caloosahatchee River. (Woodard-USGS)

Numerical simulation of "An American Haboob"

NASA Astrophysics Data System (ADS)

Vukovic, A.; Vujadinovic, M.; Pejanovic, G.; Andric, J.; Kumjian, M. R.; Djurdjevic, V.; Dacic, M.; Prasad, A. K.; El-Askary, H. M.; Paris, B. C.; Petkovic, S.; Nickovic, S.; Sprigg, W. A.

2013-10-01

A dust storm of fearful proportions hit Phoenix in the early evening hours of 5 July 2011. This storm, an American haboob, was predicted hours in advance because numerical, land-atmosphere modeling, computing power and remote sensing of dust events have improved greatly over the past decade. High resolution numerical models are required for accurate simulation of the small-scales of the haboob process, with high velocity surface winds produced by strong convection and severe downbursts. Dust productive areas in this region consist mainly of agricultural fields, with soil surfaces disturbed by plowing and tracks of land in the high Sonoran desert laid barren by ongoing draught. Model simulation of the 5 July 2011 dust storm uses the coupled atmospheric-dust model NMME-DREAM with 3.5 km horizontal resolution. A mask of the potentially dust productive regions is obtained from the land cover and the Normalized Difference Vegetation Index (NDVI) data from the Moderate Resolution Imaging Spectroradiometer (MODIS). Model results are compared with radar and other satellite-based images and surface meteorological and PM10 observations. The atmospheric model successfully hindcasted the position of the front in space and time, with about 1 h late arrival in Phoenix. The dust model predicted the rapid uptake of dust and high values of dust concentration in the ensuing storm. South of Phoenix, over the closest source regions (~ 25 km), the model PM10 surface dust concentration reached ~ 2500 μg m-3, but underestimated the values measured by the PM10stations within the city. Model results are also validated by the MODIS aerosol optical depth (AOD), employing deep blue (DB) algorithms for aerosol loadings. Model validation included Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO), equipped with the lidar instrument, to disclose the vertical structure of dust aerosols as well as aerosol subtypes. Promising results encourage further research and application of high-resolution modeling and satellite-based remote sensing to warn of approaching severe dust events and reduce risks for safety and health.

Hyperlens-array-implemented optical microscopy

NASA Astrophysics Data System (ADS)

Iwanaga, Masanobu

2014-08-01

Limit of resolution of conventional optical microscopes has never reached below 100 nm under visible light illumination. We show that numerically designed high-transmittance hyperlens array (HLA) is implemented in an optical microscope and works in practice for achieving one-shot-recording optical images of in-situ placed objects with sub 50 nm resolution in lateral direction. Direct resolution test employing well-defined nanopatterns proves that the HLA-implemented imaging is super-resolution optical microscopy, which works even under nW/mm2 visible illumination for objects. The HLA implementation makes the resolution of conventional microscopes one-scale higher, leading to the 1/10 illumination wavelength range, that is, mesoscopic range.

High resolution micro-CT of low attenuating organic materials using large area photon-counting detector

NASA Astrophysics Data System (ADS)

Kumpová, I.; Vavřík, D.; Fíla, T.; Koudelka, P.; Jandejsek, I.; Jakůbek, J.; Kytýř, D.; Zlámal, P.; Vopálenský, M.; Gantar, A.

2016-02-01

To overcome certain limitations of contemporary materials used for bone tissue engineering, such as inflammatory response after implantation, a whole new class of materials based on polysaccharide compounds is being developed. Here, nanoparticulate bioactive glass reinforced gelan-gum (GG-BAG) has recently been proposed for the production of bone scaffolds. This material offers promising biocompatibility properties, including bioactivity and biodegradability, with the possibility of producing scaffolds with directly controlled microgeometry. However, to utilize such a scaffold with application-optimized properties, large sets of complex numerical simulations using the real microgeometry of the material have to be carried out during the development process. Because the GG-BAG is a material with intrinsically very low attenuation to X-rays, its radiographical imaging, including tomographical scanning and reconstructions, with resolution required by numerical simulations might be a very challenging task. In this paper, we present a study on X-ray imaging of GG-BAG samples. High-resolution volumetric images of investigated specimens were generated on the basis of micro-CT measurements using a large area flat-panel detector and a large area photon-counting detector. The photon-counting detector was composed of a 010× 1 matrix of Timepix edgeless silicon pixelated detectors with tiling based on overlaying rows (i.e. assembled so that no gap is present between individual rows of detectors). We compare the results from both detectors with the scanning electron microscopy on selected slices in transversal plane. It has been shown that the photon counting detector can provide approx. 3× better resolution of the details in low-attenuating materials than the integrating flat panel detectors. We demonstrate that employment of a large area photon counting detector is a good choice for imaging of low attenuating materials with the resolution sufficient for numerical simulations.

High-order ENO schemes applied to two- and three-dimensional compressible flow

NASA Technical Reports Server (NTRS)

Shu, Chi-Wang; Erlebacher, Gordon; Zang, Thomas A.; Whitaker, David; Osher, Stanley

1991-01-01

High order essentially non-oscillatory (ENO) finite difference schemes are applied to the 2-D and 3-D compressible Euler and Navier-Stokes equations. Practical issues, such as vectorization, efficiency of coding, cost comparison with other numerical methods, and accuracy degeneracy effects, are discussed. Numerical examples are provided which are representative of computational problems of current interest in transition and turbulence physics. These require both nonoscillatory shock capturing and high resolution for detailed structures in the smooth regions and demonstrate the advantage of ENO schemes.

Spatial variability of the Black Sea surface temperature from high resolution modeling and satellite measurements

NASA Astrophysics Data System (ADS)

Mizyuk, Artem; Senderov, Maxim; Korotaev, Gennady

2016-04-01

Large number of numerical ocean models were implemented for the Black Sea basin during last two decades. They reproduce rather similar structure of synoptical variability of the circulation. Since 00-s numerical studies of the mesoscale structure are carried out using high performance computing (HPC). With the growing capacity of computing resources it is now possible to reconstruct the Black Sea currents with spatial resolution of several hundreds meters. However, how realistic these results can be? In the proposed study an attempt is made to understand which spatial scales are reproduced by ocean model in the Black Sea. Simulations are made using parallel version of NEMO (Nucleus for European Modelling of the Ocean). A two regional configurations with spatial resolutions 5 km and 2.5 km are described. Comparison of the SST from simulations with two spatial resolutions shows rather qualitative difference of the spatial structures. Results of high resolution simulation are compared also with satellite observations and observation-based products from Copernicus using spatial correlation and spectral analysis. Spatial scales of correlations functions for simulated and observed SST are rather close and differs much from satellite SST reanalysis. Evolution of spectral density for modelled SST and reanalysis showed agreed time periods of small scales intensification. Using of the spectral analysis for satellite measurements is complicated due to gaps. The research leading to this results has received funding from Russian Science Foundation (project № 15-17-20020)

Atmospheric Test Models and Numerical Experiments for the Simulation of the Global Distributions of Weather Data Transponders III. Horizontal Distributions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Molenkamp, C.R.; Grossman, A.

1999-12-20

A network of small balloon-borne transponders which gather very high resolution wind and temperature data for use by modern numerical weather predication models has been proposed to improve the reliability of long-range weather forecasts. The global distribution of an array of such transponders is simulated using LLNL's atmospheric parcel transport model (GRANTOUR) with winds supplied by two different general circulation models. An initial study used winds from CCM3 with a horizontal resolution of about 3 degrees in latitude and longitude, and a second study used winds from NOGAPS with a 0.75 degree horizontal resolution. Results from both simulations show thatmore » reasonable global coverage can be attained by releasing balloons from an appropriate set of launch sites.« less

High spectral resolution lidar at the university of wisconsin-madison

NASA Astrophysics Data System (ADS)

Razenkov, Ilya I.; Eloranta, Edwin W.

2018-04-01

This paper describes the modifications done on the University of Wisconsin-Madison High Spectral Resolution Lidar (HSRL) that improved the instrument's performance. The University of Wisconsin HSRL lidars designed by our group at the Space Science and Engineering Center were deployed in numerous field campaigns in various locations around the world. Over the years the instruments have undergone multiple modifications that improved the performance and added new measurement capabilities such as atmospheric temperature profile and extinction cross-section measurements.

High-order centered difference methods with sharp shock resolution

NASA Technical Reports Server (NTRS)

Gustafsson, Bertil; Olsson, Pelle

1994-01-01

In this paper we consider high-order centered finite difference approximations of hyperbolic conservation laws. We propose different ways of adding artificial viscosity to obtain sharp shock resolution. For the Riemann problem we give simple explicit formulas for obtaining stationary one and two-point shocks. This can be done for any order of accuracy. It is shown that the addition of artificial viscosity is equivalent to ensuring the Lax k-shock condition. We also show numerical experiments that verify the theoretical results.

STS-65 Earth observation of Hurricane Emilia in Eastern Pacific Ocean

NASA Image and Video Library

1994-07-18

STS-65 Earth observation taken aboard Columbia, Orbiter Vehicle (OV) 102, shows Hurricane Emilia in the Eastern Pacific Ocean. Hurricane Emilia's wind speeds exceeded 150 knots. This high oblique view of the storm shows numerous spiral bands of thunderstorms, overshooting thunderstorm tops at the tropopause, and a well developed eye at the center of the picture. Shuttle photography provides high resolution details of these powerful and destructive systems that are not fully possible from lower-resolution, unmanned satellites.

Numerical simulations of significant orographic precipitation in Madeira island

NASA Astrophysics Data System (ADS)

Couto, Flavio Tiago; Ducrocq, Véronique; Salgado, Rui; Costa, Maria João

2016-03-01

High-resolution simulations of high precipitation events with the MESO-NH model are presented, and also used to verify that increasing horizontal resolution in zones of complex orography, such as in Madeira island, improve the simulation of the spatial distribution and total precipitation. The simulations succeeded in reproducing the general structure of the cloudy systems over the ocean in the four periods considered of significant accumulated precipitation. The accumulated precipitation over the Madeira was better represented with the 0.5 km horizontal resolution and occurred under four distinct synoptic situations. Different spatial patterns of the rainfall distribution over the Madeira have been identified.

Magnetoacoustic tomography with magnetic induction for high-resolution bioimepedance imaging through vector source reconstruction under the static field of MRI magnet

PubMed Central

Mariappan, Leo; Hu, Gang; He, Bin

2014-01-01

Purpose: Magnetoacoustic tomography with magnetic induction (MAT-MI) is an imaging modality to reconstruct the electrical conductivity of biological tissue based on the acoustic measurements of Lorentz force induced tissue vibration. This study presents the feasibility of the authors' new MAT-MI system and vector source imaging algorithm to perform a complete reconstruction of the conductivity distribution of real biological tissues with ultrasound spatial resolution. Methods: In the present study, using ultrasound beamformation, imaging point spread functions are designed to reconstruct the induced vector source in the object which is used to estimate the object conductivity distribution. Both numerical studies and phantom experiments are performed to demonstrate the merits of the proposed method. Also, through the numerical simulations, the full width half maximum of the imaging point spread function is calculated to estimate of the spatial resolution. The tissue phantom experiments are performed with a MAT-MI imaging system in the static field of a 9.4 T magnetic resonance imaging magnet. Results: The image reconstruction through vector beamformation in the numerical and experimental studies gives a reliable estimate of the conductivity distribution in the object with a ∼1.5 mm spatial resolution corresponding to the imaging system frequency of 500 kHz ultrasound. In addition, the experiment results suggest that MAT-MI under high static magnetic field environment is able to reconstruct images of tissue-mimicking gel phantoms and real tissue samples with reliable conductivity contrast. Conclusions: The results demonstrate that MAT-MI is able to image the electrical conductivity properties of biological tissues with better than 2 mm spatial resolution at 500 kHz, and the imaging with MAT-MI under a high static magnetic field environment is able to provide improved imaging contrast for biological tissue conductivity reconstruction. PMID:24506649

Assessment of the Suitability of High Resolution Numerical Weather Model Outputs for Hydrological Modelling in Mountainous Cold Regions

NASA Astrophysics Data System (ADS)

Rasouli, K.; Pomeroy, J. W.; Hayashi, M.; Fang, X.; Gutmann, E. D.; Li, Y.

2017-12-01

The hydrology of mountainous cold regions has a large spatial variability that is driven both by climate variability and near-surface process variability associated with complex terrain and patterns of vegetation, soils, and hydrogeology. There is a need to downscale large-scale atmospheric circulations towards the fine scales that cold regions hydrological processes operate at to assess their spatial variability in complex terrain and quantify uncertainties by comparison to field observations. In this research, three high resolution numerical weather prediction models, namely, the Intermediate Complexity Atmosphere Research (ICAR), Weather Research and Forecasting (WRF), and Global Environmental Multiscale (GEM) models are used to represent spatial and temporal patterns of atmospheric conditions appropriate for hydrological modelling. An area covering high mountains and foothills of the Canadian Rockies was selected to assess and compare high resolution ICAR (1 km × 1 km), WRF (4 km × 4 km), and GEM (2.5 km × 2.5 km) model outputs with station-based meteorological measurements. ICAR with very low computational cost was run with different initial and boundary conditions and with finer spatial resolution, which allowed an assessment of modelling uncertainty and scaling that was difficult with WRF. Results show that ICAR, when compared with WRF and GEM, performs very well in precipitation and air temperature modelling in the Canadian Rockies, while all three models show a fair performance in simulating wind and humidity fields. Representation of local-scale atmospheric dynamics leading to realistic fields of temperature and precipitation by ICAR, WRF, and GEM makes these models suitable for high resolution cold regions hydrological predictions in complex terrain, which is a key factor in estimating water security in western Canada.

Pluto in Hi-Def

NASA Image and Video Library

2008-01-24

This image demonstrates the first detection of Pluto using the high-resolution mode on the NASA New Horizons Long-Range Reconnaissance Imager. The mode provides a clear separation between Pluto and numerous nearby background stars.

High-resolution digital holography with the aid of coherent diffraction imaging.

PubMed

Jiang, Zhilong; Veetil, Suhas P; Cheng, Jun; Liu, Cheng; Wang, Ling; Zhu, Jianqiang

2015-08-10

The image reconstructed in ordinary digital holography was unable to bring out desired resolution in comparison to photographic materials; thus making it less preferable for many interesting applications. A method is proposed to enhance the resolution of digital holography in all directions by placing a random phase plate between the specimen and the electronic camera and then using an iterative approach to do the reconstruction. With this method, the resolution is improved remarkably in comparison to ordinary digital holography. Theoretical analysis is supported by numerical simulation. The feasibility of the method is also studied experimentally.

Physical mechanisms of longitudinal vortexes formation, appearance of zones with high heat fluxes and early transition in hypersonic flow over delta wing with blunted leading edges

NASA Astrophysics Data System (ADS)

Alexandrov, S. V.; Vaganov, A. V.; Shalaev, V. I.

2016-10-01

Processes of vortex structures formation and they interactions with the boundary layer in the hypersonic flow over delta wing with blunted leading edges are analyzed on the base of experimental investigations and numerical solutions of Navier-Stokes equations. Physical mechanisms of longitudinal vortexes formation, appearance of abnormal zones with high heat fluxes and early laminar turbulent transition are studied. These phenomena were observed in many high-speed wind tunnel experiments; however they were understood only using the detailed analysis of numerical modeling results with the high resolution. Presented results allowed explaining experimental phenomena. ANSYS CFX code (the DAFE MIPT license) on the grid with 50 million nodes was used for the numerical modeling. The numerical method was verified by comparison calculated heat flux distributions on the wing surface with experimental data.

National Centers for Environmental Prediction

Science.gov Websites

Contacts Change Log Events Calendar Numerical Forecast Systems Link to NOAA/ESRL Rapid Refresh page [< ;--click here] Link to NOAA/ESRL High-Resolution Rapid Refresh page [<--click here] NOAA / National

Evolution of a double-front Rayleigh-Taylor system using a graphics-processing-unit-based high-resolution thermal lattice-Boltzmann model.

PubMed

Ripesi, P; Biferale, L; Schifano, S F; Tripiccione, R

2014-04-01

We study the turbulent evolution originated from a system subjected to a Rayleigh-Taylor instability with a double density at high resolution in a two-dimensional geometry using a highly optimized thermal lattice-Boltzmann code for GPUs. Our investigation's initial condition, given by the superposition of three layers with three different densities, leads to the development of two Rayleigh-Taylor fronts that expand upward and downward and collide in the middle of the cell. By using high-resolution numerical data we highlight the effects induced by the collision of the two turbulent fronts in the long-time asymptotic regime. We also provide details on the optimized lattice-Boltzmann code that we have run on a cluster of GPUs.

VizieR Online Data Catalog: Spectroscopic analysis of 348 red giants (Zielinski+, 2012)

NASA Astrophysics Data System (ADS)

Zielinski, P.; Niedzielski, A.; Wolszczan, A.; Adamow, M.; Nowak, G.

2012-10-01

The atmospheric parameters were derived using a strictly spectroscopic method based on the LTE analysis of equivalent widths of FeI and FeII lines. With existing photometric data and the Hipparcos parallaxes, we estimated stellar masses and ages via evolutionary tracks fitting. The stellar radii were calculated from either estimated masses and the spectroscopic logg or from the spectroscopic Teff and estimated luminosities. The absolute radial velocities were obtained by cross-correlating spectra with a numerical template. Our high-quality, high-resolution optical spectra have been collected since 2004 with the Hobby-Eberly Telescope (HET), located in the McDonald Observatory. The telescope was equipped with the High Resolution Spectrograph (HRS; R~60000 resolution). (2 data files).

A free energy satisfying discontinuous Galerkin method for one-dimensional Poisson-Nernst-Planck systems

NASA Astrophysics Data System (ADS)

Liu, Hailiang; Wang, Zhongming

2017-01-01

We design an arbitrary-order free energy satisfying discontinuous Galerkin (DG) method for solving time-dependent Poisson-Nernst-Planck systems. Both the semi-discrete and fully discrete DG methods are shown to satisfy the corresponding discrete free energy dissipation law for positive numerical solutions. Positivity of numerical solutions is enforced by an accuracy-preserving limiter in reference to positive cell averages. Numerical examples are presented to demonstrate the high resolution of the numerical algorithm and to illustrate the proven properties of mass conservation, free energy dissipation, as well as the preservation of steady states.

Ultra-sensitive magnetic microscopy with an optically pumped magnetometer

DOE PAGES

Kim, Young Jin; Savukov, Igor Mykhaylovich

2016-04-22

Optically pumped magnetometers (OPMs) based on lasers and alkali-metal vapor cells are currently the most sensitive non-cryogenic magnetic field sensors. Many applications in neuroscience and other fields require high-resolution, high-sensitivity magnetic microscopic measurements. In order to meet this demand we combined a cm-size spin-exchange relaxation-free (SERF) OPM and flux guides (FGs) to realize an ultra-sensitive FG-OPM magnetic microscope. The FGs serve to transmit the target magnetic flux to the OPM thus improving both the resolution and sensitivity to small magnetic objects. We investigated the performance of the FG-OPM device using experimental and numerical methods, and demonstrated that an optimized devicemore » can achieve a unique combination of high resolution (80 μm) and high sensitivity (8.1 pT/). Additionally, we also performed numerical calculations of the magnetic field distribution in the FGs to estimate the magnetic noise originating from the domain fluctuations in the material of the FGs. We anticipate many applications of the FG-OPM device such as the detection of micro-biological magnetic fields; the detection of magnetic nano-particles; and non-destructive testing. From our theoretical estimate, an FG-OPM could detect the magnetic field of a single neuron, which would be an important milestone in neuroscience.« less

Ultra-sensitive Magnetic Microscopy with an Optically Pumped Magnetometer

NASA Astrophysics Data System (ADS)

Kim, Young Jin; Savukov, Igor

2016-04-01

Optically pumped magnetometers (OPMs) based on lasers and alkali-metal vapor cells are currently the most sensitive non-cryogenic magnetic field sensors. Many applications in neuroscience and other fields require high-resolution, high-sensitivity magnetic microscopic measurements. In order to meet this demand we combined a cm-size spin-exchange relaxation-free (SERF) OPM and flux guides (FGs) to realize an ultra-sensitive FG-OPM magnetic microscope. The FGs serve to transmit the target magnetic flux to the OPM thus improving both the resolution and sensitivity to small magnetic objects. We investigated the performance of the FG-OPM device using experimental and numerical methods, and demonstrated that an optimized device can achieve a unique combination of high resolution (80 μm) and high sensitivity (8.1 pT/). In addition, we also performed numerical calculations of the magnetic field distribution in the FGs to estimate the magnetic noise originating from the domain fluctuations in the material of the FGs. We anticipate many applications of the FG-OPM device such as the detection of micro-biological magnetic fields; the detection of magnetic nano-particles; and non-destructive testing. From our theoretical estimate, an FG-OPM could detect the magnetic field of a single neuron, which would be an important milestone in neuroscience.

Ultra-sensitive magnetic microscopy with an optically pumped magnetometer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Young Jin; Savukov, Igor Mykhaylovich

Optically pumped magnetometers (OPMs) based on lasers and alkali-metal vapor cells are currently the most sensitive non-cryogenic magnetic field sensors. Many applications in neuroscience and other fields require high-resolution, high-sensitivity magnetic microscopic measurements. In order to meet this demand we combined a cm-size spin-exchange relaxation-free (SERF) OPM and flux guides (FGs) to realize an ultra-sensitive FG-OPM magnetic microscope. The FGs serve to transmit the target magnetic flux to the OPM thus improving both the resolution and sensitivity to small magnetic objects. We investigated the performance of the FG-OPM device using experimental and numerical methods, and demonstrated that an optimized devicemore » can achieve a unique combination of high resolution (80 μm) and high sensitivity (8.1 pT/). Additionally, we also performed numerical calculations of the magnetic field distribution in the FGs to estimate the magnetic noise originating from the domain fluctuations in the material of the FGs. We anticipate many applications of the FG-OPM device such as the detection of micro-biological magnetic fields; the detection of magnetic nano-particles; and non-destructive testing. From our theoretical estimate, an FG-OPM could detect the magnetic field of a single neuron, which would be an important milestone in neuroscience.« less

Stochastic porous media modeling and high-resolution schemes for numerical simulation of subsurface immiscible fluid flow transport

NASA Astrophysics Data System (ADS)

Brantson, Eric Thompson; Ju, Binshan; Wu, Dan; Gyan, Patricia Semwaah

2018-04-01

This paper proposes stochastic petroleum porous media modeling for immiscible fluid flow simulation using Dykstra-Parson coefficient (V DP) and autocorrelation lengths to generate 2D stochastic permeability values which were also used to generate porosity fields through a linear interpolation technique based on Carman-Kozeny equation. The proposed method of permeability field generation in this study was compared to turning bands method (TBM) and uniform sampling randomization method (USRM). On the other hand, many studies have also reported that, upstream mobility weighting schemes, commonly used in conventional numerical reservoir simulators do not accurately capture immiscible displacement shocks and discontinuities through stochastically generated porous media. This can be attributed to high level of numerical smearing in first-order schemes, oftentimes misinterpreted as subsurface geological features. Therefore, this work employs high-resolution schemes of SUPERBEE flux limiter, weighted essentially non-oscillatory scheme (WENO), and monotone upstream-centered schemes for conservation laws (MUSCL) to accurately capture immiscible fluid flow transport in stochastic porous media. The high-order schemes results match well with Buckley Leverett (BL) analytical solution without any non-oscillatory solutions. The governing fluid flow equations were solved numerically using simultaneous solution (SS) technique, sequential solution (SEQ) technique and iterative implicit pressure and explicit saturation (IMPES) technique which produce acceptable numerical stability and convergence rate. A comparative and numerical examples study of flow transport through the proposed method, TBM and USRM permeability fields revealed detailed subsurface instabilities with their corresponding ultimate recovery factors. Also, the impact of autocorrelation lengths on immiscible fluid flow transport were analyzed and quantified. A finite number of lines used in the TBM resulted into visual artifact banding phenomenon unlike the proposed method and USRM. In all, the proposed permeability and porosity fields generation coupled with the numerical simulator developed will aid in developing efficient mobility control schemes to improve on poor volumetric sweep efficiency in porous media.

Low-resolution simulations of vesicle suspensions in 2D

NASA Astrophysics Data System (ADS)

Kabacaoğlu, Gökberk; Quaife, Bryan; Biros, George

2018-03-01

Vesicle suspensions appear in many biological and industrial applications. These suspensions are characterized by rich and complex dynamics of vesicles due to their interaction with the bulk fluid, and their large deformations and nonlinear elastic properties. Many existing state-of-the-art numerical schemes can resolve such complex vesicle flows. However, even when using provably optimal algorithms, these simulations can be computationally expensive, especially for suspensions with a large number of vesicles. These high computational costs can limit the use of simulations for parameter exploration, optimization, or uncertainty quantification. One way to reduce the cost is to use low-resolution discretizations in space and time. However, it is well-known that simply reducing the resolution results in vesicle collisions, numerical instabilities, and often in erroneous results. In this paper, we investigate the effect of a number of algorithmic empirical fixes (which are commonly used by many groups) in an attempt to make low-resolution simulations more stable and more predictive. Based on our empirical studies for a number of flow configurations, we propose a scheme that attempts to integrate these fixes in a systematic way. This low-resolution scheme is an extension of our previous work [51,53]. Our low-resolution correction algorithms (LRCA) include anti-aliasing and membrane reparametrization for avoiding spurious oscillations in vesicles' membranes, adaptive time stepping and a repulsion force for handling vesicle collisions and, correction of vesicles' area and arc-length for maintaining physical vesicle shapes. We perform a systematic error analysis by comparing the low-resolution simulations of dilute and dense suspensions with their high-fidelity, fully resolved, counterparts. We observe that the LRCA enables both efficient and statistically accurate low-resolution simulations of vesicle suspensions, while it can be 10× to 100× faster.

Influence of Gridded Standoff Measurement Resolution on Numerical Bathymetric Inversion

NASA Astrophysics Data System (ADS)

Hesser, T.; Farthing, M. W.; Brodie, K.

2016-02-01

The bathymetry from the surfzone to the shoreline incurs frequent, active movement due to wave energy interacting with the seafloor. Methodologies to measure bathymetry range from point-source in-situ instruments, vessel-mounted single-beam or multi-beam sonar surveys, airborne bathymetric lidar, as well as inversion techniques from standoff measurements of wave processes from video or radar imagery. Each type of measurement has unique sources of error and spatial and temporal resolution and availability. Numerical bathymetry estimation frameworks can use these disparate data types in combination with model-based inversion techniques to produce a "best-estimate of bathymetry" at a given time. Understanding how the sources of error and varying spatial or temporal resolution of each data type affect the end result is critical for determining best practices and in turn increase the accuracy of bathymetry estimation techniques. In this work, we consider an initial step in the development of a complete framework for estimating bathymetry in the nearshore by focusing on gridded standoff measurements and in-situ point observations in model-based inversion at the U.S. Army Corps of Engineers Field Research Facility in Duck, NC. The standoff measurement methods return wave parameters computed using linear wave theory from the direct measurements. These gridded datasets can range in temporal and spatial resolution that do not match the desired model parameters and therefore could lead to a reduction in the accuracy of these methods. Specifically, we investigate the affect of numerical resolution on the accuracy of an Ensemble Kalman Filter bathymetric inversion technique in relation to the spatial and temporal resolution of the gridded standoff measurements. The accuracies of the bathymetric estimates are compared with both high-resolution Real Time Kinematic (RTK) single-beam surveys as well as alternative direct in-situ measurements using sonic altimeters.

Urban pluvial flood prediction: a case study evaluating radar rainfall nowcasts and numerical weather prediction models as model inputs.

PubMed

Thorndahl, Søren; Nielsen, Jesper Ellerbæk; Jensen, David Getreuer

2016-12-01

Flooding produced by high-intensive local rainfall and drainage system capacity exceedance can have severe impacts in cities. In order to prepare cities for these types of flood events - especially in the future climate - it is valuable to be able to simulate these events numerically, both historically and in real-time. There is a rather untested potential in real-time prediction of urban floods. In this paper, radar data observations with different spatial and temporal resolution, radar nowcasts of 0-2 h leadtime, and numerical weather models with leadtimes up to 24 h are used as inputs to an integrated flood and drainage systems model in order to investigate the relative difference between different inputs in predicting future floods. The system is tested on the small town of Lystrup in Denmark, which was flooded in 2012 and 2014. Results show it is possible to generate detailed flood maps in real-time with high resolution radar rainfall data, but rather limited forecast performance in predicting floods with leadtimes more than half an hour.

Cutting-edge Kinetic Physics with Parker Solar Probe and Solar Orbiter: The Arbitrary Linear Plasma Solver (ALPS)

NASA Astrophysics Data System (ADS)

Verscharen, D.; Klein, K. G.; Chandran, B. D. G.; Stevens, M. L.; Salem, C. S.; Bale, S. D.

2017-12-01

The Arbitrary Linear Plasma Solver (ALPS) is a parallelized numerical code that solves the dispersion relation in a hot (even relativistic) magnetized plasma with an arbitrary number of particle species with arbitrary gyrotropic equilibrium distribution functions for any direction of wave propagation with respect to the background field. In this way, ALPS retains generality and overcomes the shortcomings of previous (bi-)Maxwellian solvers for the plasma dispersion relations. The unprecedented high-resolution particle and field data products from Parker Solar Probe (PSP) and Solar Orbiter (SO) will require novel theoretical tools. ALPS is one such tool, and its use will make possible new investigations into the role of non-Maxwellian distributions in the near-Sun solar wind. It can be applied to numerous high-velocity-resolution systems, ranging from current space missions to numerical simulations. We will briefly discuss the ALPS algorithm and demonstrate its functionality based on previous solar-wind measurements. We will then highlight our plans for future applications of ALPS to PSP and SO observations.

Particle Number Dependence of the N-body Simulations of Moon Formation

NASA Astrophysics Data System (ADS)

Sasaki, Takanori; Hosono, Natsuki

2018-04-01

The formation of the Moon from the circumterrestrial disk has been investigated by using N-body simulations with the number N of particles limited from 104 to 105. We develop an N-body simulation code on multiple Pezy-SC processors and deploy Framework for Developing Particle Simulators to deal with large number of particles. We execute several high- and extra-high-resolution N-body simulations of lunar accretion from a circumterrestrial disk of debris generated by a giant impact on Earth. The number of particles is up to 107, in which 1 particle corresponds to a 10 km sized satellitesimal. We find that the spiral structures inside the Roche limit radius differ between low-resolution simulations (N ≤ 105) and high-resolution simulations (N ≥ 106). According to this difference, angular momentum fluxes, which determine the accretion timescale of the Moon also depend on the numerical resolution.

Ultra-sensitive magnetic microscopy with an atomic magnetometer and flux guides

NASA Astrophysics Data System (ADS)

Kim, Young Jin; Savukov, Igor

Many applications in neuroscience, biomedical research, and material science require high-sensitivity, high-resolution magnetometry. In order to meet this need we recently combined a cm-size spin-exchange relaxation-free Atomic Magnetometer (AM) with a flux guide (FG) to produce ultra-sensitive FG-AM magnetic microscopy. The FG serves to transmit the target magnetic flux to the AM thus enhancing both the sensitivity and resolution to tiny magnetic objects. In this talk, we will describe existing and next generation FG-AM devices and present experimental and numerical tests of its sensitivity and resolution. We demonstrate that an optimized FG-AM has sufficient resolution and sensitivity for the detection of a small number of neurons, which would be an important milestone in neuroscience. In addition, as a demonstration of one possible application of the FG-AM device, we conducted high-resolution magnetic imaging of micron-size magnetic particles. We will show that the device can produce clear microscopic magnetic image of 10 μm-size magnetic particles.

Analytical description of high-aperture STED resolution with 0–2π vortex phase modulation

PubMed Central

Xie, Hao; Liu, Yujia; Jin, Dayong; Santangelo, Philip J.; Xi, Peng

2014-01-01

Stimulated emission depletion (STED) can achieve optical superresolution, with the optical diffraction limit broken by the suppression on the periphery of the fluorescent focal spot. Previously, it is generally experimentally accepted that there exists an inverse square root relationship with the STED power and the resolution, but with arbitrary coefficients in expression. In this paper, we have removed the arbitrary coefficients by exploring the relationship between the STED power and the achievable resolution from vector optical theory for the widely used 0–2π vortex phase modulation. Electromagnetic fields of the focal region of a high numerical aperture objective are calculated and approximated into polynomials of radius in the focal plane, and analytical expression of resolution as a function of the STED intensity has been derived. As a result, the resolution can be estimated directly from the measurement of the saturation power of the dye and the STED power applied in the region of high STED power. PMID:24323224

Three-axis digital holographic microscopy for high speed volumetric imaging.

PubMed

Saglimbeni, F; Bianchi, S; Lepore, A; Di Leonardo, R

2014-06-02

Digital Holographic Microscopy allows to numerically retrieve three dimensional information encoded in a single 2D snapshot of the coherent superposition of a reference and a scattered beam. Since no mechanical scans are involved, holographic techniques have a superior performance in terms of achievable frame rates. Unfortunately, numerical reconstructions of scattered field by back-propagation leads to a poor axial resolution. Here we show that overlapping the three numerical reconstructions obtained by tilted red, green and blue beams results in a great improvement over the axial resolution and sectioning capabilities of holographic microscopy. A strong reduction in the coherent background noise is also observed when combining the volumetric reconstructions of the light fields at the three different wavelengths. We discuss the performance of our technique with two test objects: an array of four glass beads that are stacked along the optical axis and a freely diffusing rod shaped E.coli bacterium.

The coupling of high-speed high resolution experimental data and LES through data assimilation techniques

NASA Astrophysics Data System (ADS)

Harris, S.; Labahn, J. W.; Frank, J. H.; Ihme, M.

2017-11-01

Data assimilation techniques can be integrated with time-resolved numerical simulations to improve predictions of transient phenomena. In this study, optimal interpolation and nudging are employed for assimilating high-speed high-resolution measurements obtained for an inert jet into high-fidelity large-eddy simulations. This experimental data set was chosen as it provides both high spacial and temporal resolution for the three-component velocity field in the shear layer of the jet. Our first objective is to investigate the impact that data assimilation has on the resulting flow field for this inert jet. This is accomplished by determining the region influenced by the data assimilation and corresponding effect on the instantaneous flow structures. The second objective is to determine optimal weightings for two data assimilation techniques. The third objective is to investigate how the frequency at which the data is assimilated affects the overall predictions. Graduate Research Assistant, Department of Mechanical Engineering.

High-resolution modeling of a marine ecosystem using the FRESCO hydroecological model

NASA Astrophysics Data System (ADS)

Zalesny, V. B.; Tamsalu, R.

2009-02-01

The FRESCO (Finnish Russian Estonian Cooperation) mathematical model describing a marine hydroecosystem is presented. The methodology of the numerical solution is based on the method of multicomponent splitting into physical and biological processes, spatial coordinates, etc. The model is used for the reproduction of physical and biological processes proceeding in the Baltic Sea. Numerical experiments are performed with different spatial resolutions for four marine basins that are enclosed into one another: the Baltic Sea, the Gulf of Finland, the Tallinn-Helsinki water area, and Tallinn Bay. Physical processes are described by the equations of nonhydrostatic dynamics, including the k-ω parametrization of turbulence. Biological processes are described by the three-dimensional equations of an aquatic ecosystem with the use of a size-dependent parametrization of biochemical reactions. The main goal of this study is to illustrate the efficiency of the developed numerical technique and to demonstrate the importance of a high spatial resolution for water basins that have complex bottom topography, such as the Baltic Sea. Detailed information about the atmospheric forcing, bottom topography, and coastline is very important for the description of coastal dynamics and specific features of a marine ecosystem. Experiments show that the spatial inhomogeneity of hydroecosystem fields is caused by the combined effect of upwelling, turbulent mixing, surface-wave breaking, and temperature variations, which affect biochemical reactions.

A High-Resolution Godunov Method for Compressible Multi-Material Flow on Overlapping Grids

DOE Office of Scientific and Technical Information (OSTI.GOV)

Banks, J W; Schwendeman, D W; Kapila, A K

2006-02-13

A numerical method is described for inviscid, compressible, multi-material flow in two space dimensions. The flow is governed by the multi-material Euler equations with a general mixture equation of state. Composite overlapping grids are used to handle complex flow geometry and block-structured adaptive mesh refinement (AMR) is used to locally increase grid resolution near shocks and material interfaces. The discretization of the governing equations is based on a high-resolution Godunov method, but includes an energy correction designed to suppress numerical errors that develop near a material interface for standard, conservative shock-capturing schemes. The energy correction is constructed based on amore » uniform pressure-velocity flow and is significant only near the captured interface. A variety of two-material flows are presented to verify the accuracy of the numerical approach and to illustrate its use. These flows assume an equation of state for the mixture based on Jones-Wilkins-Lee (JWL) forms for the components. This equation of state includes a mixture of ideal gases as a special case. Flow problems considered include unsteady one-dimensional shock-interface collision, steady interaction of an planar interface and an oblique shock, planar shock interaction with a collection of gas-filled cylindrical inhomogeneities, and the impulsive motion of the two-component mixture in a rigid cylindrical vessel.« less

Atomic force microscopy of lead iodide crystal surfaces

NASA Astrophysics Data System (ADS)

George, M. A.; Azoulay, M.; Jayatirtha, H. N.; Biao, Y.; Burger, A.; Collins, W. E.; Silberman, E.

1994-03-01

Atomic force microscopy (AFM) was used to characterize the surface of lead iodide crystals. The high vapor pressure of lead iodide prohibits the use of traditional high resolution surface study techniques that require high vacuum conditions. AFM was used to image numerous insulating surface in various ambients, with very little sample preparation techniques needed. Freshly cleaved and modified surfaces, including, chemical and vacuum etched, and air aged surfaces, were examined. Both intrinsic and induced defects were imaged with high resolution. The results were compared to a similar AFM study of mercuric iodide surfaces and it was found that, at ambient conditions, lead iodide is significantly more stable than mercuric iodide.

Outcomes and challenges of global high-resolution non-hydrostatic atmospheric simulations using the K computer

NASA Astrophysics Data System (ADS)

Satoh, Masaki; Tomita, Hirofumi; Yashiro, Hisashi; Kajikawa, Yoshiyuki; Miyamoto, Yoshiaki; Yamaura, Tsuyoshi; Miyakawa, Tomoki; Nakano, Masuo; Kodama, Chihiro; Noda, Akira T.; Nasuno, Tomoe; Yamada, Yohei; Fukutomi, Yoshiki

2017-12-01

This article reviews the major outcomes of a 5-year (2011-2016) project using the K computer to perform global numerical atmospheric simulations based on the non-hydrostatic icosahedral atmospheric model (NICAM). The K computer was made available to the public in September 2012 and was used as a primary resource for Japan's Strategic Programs for Innovative Research (SPIRE), an initiative to investigate five strategic research areas; the NICAM project fell under the research area of climate and weather simulation sciences. Combining NICAM with high-performance computing has created new opportunities in three areas of research: (1) higher resolution global simulations that produce more realistic representations of convective systems, (2) multi-member ensemble simulations that are able to perform extended-range forecasts 10-30 days in advance, and (3) multi-decadal simulations for climatology and variability. Before the K computer era, NICAM was used to demonstrate realistic simulations of intra-seasonal oscillations including the Madden-Julian oscillation (MJO), merely as a case study approach. Thanks to the big leap in computational performance of the K computer, we could greatly increase the number of cases of MJO events for numerical simulations, in addition to integrating time and horizontal resolution. We conclude that the high-resolution global non-hydrostatic model, as used in this five-year project, improves the ability to forecast intra-seasonal oscillations and associated tropical cyclogenesis compared with that of the relatively coarser operational models currently in use. The impacts of the sub-kilometer resolution simulation and the multi-decadal simulations using NICAM are also reviewed.

A developed nearly analytic discrete method for forward modeling in the frequency domain

NASA Astrophysics Data System (ADS)

Liu, Shaolin; Lang, Chao; Yang, Hui; Wang, Wenshuai

2018-02-01

High-efficiency forward modeling methods play a fundamental role in full waveform inversion (FWI). In this paper, the developed nearly analytic discrete (DNAD) method is proposed to accelerate frequency-domain forward modeling processes. We first derive the discretization of frequency-domain wave equations via numerical schemes based on the nearly analytic discrete (NAD) method to obtain a linear system. The coefficients of numerical stencils are optimized to make the linear system easier to solve and to minimize computing time. Wavefield simulation and numerical dispersion analysis are performed to compare the numerical behavior of DNAD method with that of the conventional NAD method. The results demonstrate the superiority of our proposed method. Finally, the DNAD method is implemented in frequency-domain FWI, and high-resolution inverse results are obtained.

Application of up-sampling and resolution scaling to Fresnel reconstruction of digital holograms.

PubMed

Williams, Logan A; Nehmetallah, Georges; Aylo, Rola; Banerjee, Partha P

2015-02-20

Fresnel transform implementation methods using numerical preprocessing techniques are investigated in this paper. First, it is shown that up-sampling dramatically reduces the minimum reconstruction distance requirements and allows maximal signal recovery by eliminating aliasing artifacts which typically occur at distances much less than the Rayleigh range of the object. Second, zero-padding is employed to arbitrarily scale numerical resolution for the purpose of resolution matching multiple holograms, where each hologram is recorded using dissimilar geometric or illumination parameters. Such preprocessing yields numerical resolution scaling at any distance. Both techniques are extensively illustrated using experimental results.

Imaging whole mouse brains with a dual resolution serial swept-source optical coherence tomography scanner

NASA Astrophysics Data System (ADS)

Lefebvre, Joël.; Castonguay, Alexandre; Lesage, Frédéric

2018-02-01

High resolution imaging of whole rodent brains using serial OCT scanners is a promising method to investigate microstructural changes in tissue related to the evolution of neuropathologies. Although micron to sub-micron sampling resolution can be obtained by using high numerical aperture objectives and dynamic focusing, such an imaging system is not adapted to whole brain imaging. This is due to the large amount of data it generates and the significant computational resources required for reconstructing such volumes. To address this limitation, a dual resolution serial OCT scanner was developed. The optical setup consists in a swept-source OCT made of two sample and reference arms, each arm being coupled with different microscope objectives (3X / 40X). Motorized flip mirrors were used to switch between each OCT arm, thus allowing low and high resolution acquisitions within the same sample. The low resolution OCT volumes acquired with the 3X arm were stitched together, providing a 3D map of the whole mouse brain. This brain can be registered to an OCT brain template to enable neurological structures localization. The high resolution volumes acquired with the 40X arm were also stitched together to create local high resolution 3D maps of the tissue microstructure. The 40X data can be acquired at any arbitrary location in the sample, thus limiting storage-heavy high resolution data to application restricted to specific regions of interest. By providing dual-resolution OCT data, this setup can be used to validate diffusion MRI with tissue microstructure derived metrics measured at any location in ex vivo brains.

Numerical computation of linear instability of detonations

NASA Astrophysics Data System (ADS)

Kabanov, Dmitry; Kasimov, Aslan

2017-11-01

We propose a method to study linear stability of detonations by direct numerical computation. The linearized governing equations together with the shock-evolution equation are solved in the shock-attached frame using a high-resolution numerical algorithm. The computed results are processed by the Dynamic Mode Decomposition technique to generate dispersion relations. The method is applied to the reactive Euler equations with simple-depletion chemistry as well as more complex multistep chemistry. The results are compared with those known from normal-mode analysis. We acknowledge financial support from King Abdullah University of Science and Technology.

CHARRON: Code for High Angular Resolution of Rotating Objects in Nature

NASA Astrophysics Data System (ADS)

Domiciano de Souza, A.; Zorec, J.; Vakili, F.

2012-12-01

Rotation is one of the fundamental physical parameters governing stellar physics and evolution. At the same time, spectrally resolved optical/IR long-baseline interferometry has proven to be an important observing tool to measure many physical effects linked to rotation, in particular, stellar flattening, gravity darkening, differential rotation. In order to interpret the high angular resolution observations from modern spectro-interferometers, such as VLTI/AMBER and VEGA/CHARA, we have developed an interferometry-oriented numerical model: CHARRON (Code for High Angular Resolution of Rotating Objects in Nature). We present here the characteristics of CHARRON, which is faster (≃q10-30 s per model) and thus more adapted to model-fitting than the first version of the code presented by Domiciano de Souza et al. (2002).

Correction of eddy current distortions in high angular resolution diffusion imaging.

PubMed

Zhuang, Jiancheng; Lu, Zhong-Lin; Vidal, Christine Bouteiller; Damasio, Hanna

2013-06-01

To correct distortions caused by eddy currents induced by large diffusion gradients during high angular resolution diffusion imaging without any auxiliary reference scans. Image distortion parameters were obtained by image coregistration, performed only between diffusion-weighted images with close diffusion gradient orientations. A linear model that describes distortion parameters (translation, scale, and shear) as a function of diffusion gradient directions was numerically computed to allow individualized distortion correction for every diffusion-weighted image. The assumptions of the algorithm were successfully verified in a series of experiments on phantom and human scans. Application of the proposed algorithm in high angular resolution diffusion images markedly reduced eddy current distortions when compared to results obtained with previously published methods. The method can correct eddy current artifacts in the high angular resolution diffusion images, and it avoids the problematic procedure of cross-correlating images with significantly different contrasts resulting from very different gradient orientations or strengths. Copyright © 2012 Wiley Periodicals, Inc.

Low sidelobe level and high time resolution for metallic ultrasonic testing with linear-chirp-Golay coded excitation

NASA Astrophysics Data System (ADS)

Zhang, Jiaying; Gang, Tie; Ye, Chaofeng; Cong, Sen

2018-04-01

Linear-chirp-Golay (LCG)-coded excitation combined with pulse compression is proposed in this paper to improve the time resolution and suppress sidelobe in ultrasonic testing. The LCG-coded excitation is binary complementary pair Golay signal with linear-chirp signal applied on every sub pulse. Compared with conventional excitation which is a common ultrasonic testing method using a brief narrow pulse as exciting signal, the performances of LCG-coded excitation, in terms of time resolution improvement and sidelobe suppression, are studied via numerical and experimental investigations. The numerical simulations are implemented using Matlab K-wave toolbox. It is seen from the simulation results that time resolution of LCG excitation is 35.5% higher and peak sidelobe level (PSL) is 57.6 dB lower than linear-chirp excitation with 2.4 MHz chirp bandwidth and 3 μs time duration. In the B-scan experiment, time resolution of LCG excitation is higher and PSL is lower than conventional brief pulse excitation and chirp excitation. In terms of time resolution, LCG-coded signal has better performance than chirp signal. Moreover, the impact of chirp bandwidth on LCG-coded signal is less than that on chirp signal. In addition, the sidelobe of LCG-coded signal is lower than that of chirp signal with pulse compression.

Statistical Analyses of High-Resolution Aircraft and Satellite Observations of Sea Ice: Applications for Improving Model Simulations

NASA Astrophysics Data System (ADS)

Farrell, S. L.; Kurtz, N. T.; Richter-Menge, J.; Harbeck, J. P.; Onana, V.

2012-12-01

Satellite-derived estimates of ice thickness and observations of ice extent over the last decade point to a downward trend in the basin-scale ice volume of the Arctic Ocean. This loss has broad-ranging impacts on the regional climate and ecosystems, as well as implications for regional infrastructure, marine navigation, national security, and resource exploration. New observational datasets at small spatial and temporal scales are now required to improve our understanding of physical processes occurring within the ice pack and advance parameterizations in the next generation of numerical sea-ice models. High-resolution airborne and satellite observations of the sea ice are now available at meter-scale resolution or better that provide new details on the properties and morphology of the ice pack across basin scales. For example the NASA IceBridge airborne campaign routinely surveys the sea ice of the Arctic and Southern Oceans with an advanced sensor suite including laser and radar altimeters and digital cameras that together provide high-resolution measurements of sea ice freeboard, thickness, snow depth and lead distribution. Here we present statistical analyses of the ice pack primarily derived from the following IceBridge instruments: the Digital Mapping System (DMS), a nadir-looking, high-resolution digital camera; the Airborne Topographic Mapper, a scanning lidar; and the University of Kansas snow radar, a novel instrument designed to estimate snow depth on sea ice. Together these instruments provide data from which a wide range of sea ice properties may be derived. We provide statistics on lead distribution and spacing, lead width and area, floe size and distance between floes, as well as ridge height, frequency and distribution. The goals of this study are to (i) identify unique statistics that can be used to describe the characteristics of specific ice regions, for example first-year/multi-year ice, diffuse ice edge/consolidated ice pack, and convergent/divergent ice zones, (ii) provide datasets that support enhanced parameterizations in numerical models as well as model initialization and validation, (iii) parameters of interest to Arctic stakeholders for marine navigation and ice engineering studies, and (iv) statistics that support algorithm development for the next-generation of airborne and satellite altimeters, including NASA's ICESat-2 mission. We describe the potential contribution our results can make towards the improvement of coupled ice-ocean numerical models, and discuss how data synthesis and integration with high-resolution models may improve our understanding of sea ice variability and our capabilities in predicting the future state of the ice pack.

Proposed Use of the NASA Ames Nebula Cloud Computing Platform for Numerical Weather Prediction and the Distribution of High Resolution Satellite Imagery

NASA Technical Reports Server (NTRS)

Limaye, Ashutosh S.; Molthan, Andrew L.; Srikishen, Jayanthi

2010-01-01

The development of the Nebula Cloud Computing Platform at NASA Ames Research Center provides an open-source solution for the deployment of scalable computing and storage capabilities relevant to the execution of real-time weather forecasts and the distribution of high resolution satellite data to the operational weather community. Two projects at Marshall Space Flight Center may benefit from use of the Nebula system. The NASA Short-term Prediction Research and Transition (SPoRT) Center facilitates the use of unique NASA satellite data and research capabilities in the operational weather community by providing datasets relevant to numerical weather prediction, and satellite data sets useful in weather analysis. SERVIR provides satellite data products for decision support, emphasizing environmental threats such as wildfires, floods, landslides, and other hazards, with interests in numerical weather prediction in support of disaster response. The Weather Research and Forecast (WRF) model Environmental Modeling System (WRF-EMS) has been configured for Nebula cloud computing use via the creation of a disk image and deployment of repeated instances. Given the available infrastructure within Nebula and the "infrastructure as a service" concept, the system appears well-suited for the rapid deployment of additional forecast models over different domains, in response to real-time research applications or disaster response. Future investigations into Nebula capabilities will focus on the development of a web mapping server and load balancing configuration to support the distribution of high resolution satellite data sets to users within the National Weather Service and international partners of SERVIR.

Coincidental match of numerical simulation and physics

NASA Astrophysics Data System (ADS)

Pierre, B.; Gudmundsson, J. S.

2010-08-01

Consequences of rapid pressure transients in pipelines range from increased fatigue to leakages and to complete ruptures of pipeline. Therefore, accurate predictions of rapid pressure transients in pipelines using numerical simulations are critical. State of the art modelling of pressure transient in general, and water hammer in particular include unsteady friction in addition to the steady frictional pressure drop, and numerical simulations rely on the method of characteristics. Comparison of rapid pressure transient calculations by the method of characteristics and a selected high resolution finite volume method highlights issues related to modelling of pressure waves and illustrates that matches between numerical simulations and physics are purely coincidental.

Algorithmic trends in computational fluid dynamics; The Institute for Computer Applications in Science and Engineering (ICASE)/LaRC Workshop, NASA Langley Research Center, Hampton, VA, US, Sep. 15-17, 1991

NASA Technical Reports Server (NTRS)

Hussaini, M. Y. (Editor); Kumar, A. (Editor); Salas, M. D. (Editor)

1993-01-01

The purpose here is to assess the state of the art in the areas of numerical analysis that are particularly relevant to computational fluid dynamics (CFD), to identify promising new developments in various areas of numerical analysis that will impact CFD, and to establish a long-term perspective focusing on opportunities and needs. Overviews are given of discretization schemes, computational fluid dynamics, algorithmic trends in CFD for aerospace flow field calculations, simulation of compressible viscous flow, and massively parallel computation. Also discussed are accerelation methods, spectral and high-order methods, multi-resolution and subcell resolution schemes, and inherently multidimensional schemes.

Adaptive Numerical Dissipative Control in High Order Schemes for Multi-D Non-Ideal MHD

NASA Technical Reports Server (NTRS)

Yee, H. C.; Sjoegreen, B.

2004-01-01

The goal is to extend our adaptive numerical dissipation control in high order filter schemes and our new divergence-free methods for ideal MHD to non-ideal MHD that include viscosity and resistivity. The key idea consists of automatic detection of different flow features as distinct sensors to signal the appropriate type and amount of numerical dissipation/filter where needed and leave the rest of the region free of numerical dissipation contamination. These scheme-independent detectors are capable of distinguishing shocks/shears, flame sheets, turbulent fluctuations and spurious high-frequency oscillations. The detection algorithm is based on an artificial compression method (ACM) (for shocks/shears), and redundant multi-resolution wavelets (WAV) (for the above types of flow feature). These filter approaches also provide a natural and efficient way for the minimization of Div(B) numerical error. The filter scheme consists of spatially sixth order or higher non-dissipative spatial difference operators as the base scheme for the inviscid flux derivatives. If necessary, a small amount of high order linear dissipation is used to remove spurious high frequency oscillations. For example, an eighth-order centered linear dissipation (AD8) might be included in conjunction with a spatially sixth-order base scheme. The inviscid difference operator is applied twice for the viscous flux derivatives. After the completion of a full time step of the base scheme step, the solution is adaptively filtered by the product of a 'flow detector' and the 'nonlinear dissipative portion' of a high-resolution shock-capturing scheme. In addition, the scheme independent wavelet flow detector can be used in conjunction with spatially compact, spectral or spectral element type of base schemes. The ACM and wavelet filter schemes using the dissipative portion of a second-order shock-capturing scheme with sixth-order spatial central base scheme for both the inviscid and viscous MHD flux derivatives and a fourth-order Runge-Kutta method are denoted.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bose, Sownak; Li, Baojiu; He, Jian-hua

We describe and demonstrate the potential of a new and very efficient method for simulating certain classes of modified gravity theories, such as the widely studied f ( R ) gravity models. High resolution simulations for such models are currently very slow due to the highly nonlinear partial differential equation that needs to be solved exactly to predict the modified gravitational force. This nonlinearity is partly inherent, but is also exacerbated by the specific numerical algorithm used, which employs a variable redefinition to prevent numerical instabilities. The standard Newton-Gauss-Seidel iterative method used to tackle this problem has a poor convergencemore » rate. Our new method not only avoids this, but also allows the discretised equation to be written in a form that is analytically solvable. We show that this new method greatly improves the performance and efficiency of f ( R ) simulations. For example, a test simulation with 512{sup 3} particles in a box of size 512 Mpc/ h is now 5 times faster than before, while a Millennium-resolution simulation for f ( R ) gravity is estimated to be more than 20 times faster than with the old method. Our new implementation will be particularly useful for running very high resolution, large-sized simulations which, to date, are only possible for the standard model, and also makes it feasible to run large numbers of lower resolution simulations for covariance analyses. We hope that the method will bring us to a new era for precision cosmological tests of gravity.« less

Speeding up N-body simulations of modified gravity: chameleon screening models

NASA Astrophysics Data System (ADS)

Bose, Sownak; Li, Baojiu; Barreira, Alexandre; He, Jian-hua; Hellwing, Wojciech A.; Koyama, Kazuya; Llinares, Claudio; Zhao, Gong-Bo

2017-02-01

We describe and demonstrate the potential of a new and very efficient method for simulating certain classes of modified gravity theories, such as the widely studied f(R) gravity models. High resolution simulations for such models are currently very slow due to the highly nonlinear partial differential equation that needs to be solved exactly to predict the modified gravitational force. This nonlinearity is partly inherent, but is also exacerbated by the specific numerical algorithm used, which employs a variable redefinition to prevent numerical instabilities. The standard Newton-Gauss-Seidel iterative method used to tackle this problem has a poor convergence rate. Our new method not only avoids this, but also allows the discretised equation to be written in a form that is analytically solvable. We show that this new method greatly improves the performance and efficiency of f(R) simulations. For example, a test simulation with 5123 particles in a box of size 512 Mpc/h is now 5 times faster than before, while a Millennium-resolution simulation for f(R) gravity is estimated to be more than 20 times faster than with the old method. Our new implementation will be particularly useful for running very high resolution, large-sized simulations which, to date, are only possible for the standard model, and also makes it feasible to run large numbers of lower resolution simulations for covariance analyses. We hope that the method will bring us to a new era for precision cosmological tests of gravity.

Joint denoising, demosaicing, and chromatic aberration correction for UHD video

NASA Astrophysics Data System (ADS)

Jovanov, Ljubomir; Philips, Wilfried; Damstra, Klaas Jan; Ellenbroek, Frank

2017-09-01

High-resolution video capture is crucial for numerous applications such as surveillance, security, industrial inspection, medical imaging and digital entertainment. In the last two decades, we are witnessing a dramatic increase of the spatial resolution and the maximal frame rate of video capturing devices. In order to achieve further resolution increase, numerous challenges will be facing us. Due to the reduced size of the pixel, the amount of light also reduces, leading to the increased noise level. Moreover, the reduced pixel size makes the lens imprecisions more pronounced, which especially applies to chromatic aberrations. Even in the case when high quality lenses are used some chromatic aberration artefacts will remain. Next, noise level additionally increases due to the higher frame rates. To reduce the complexity and the price of the camera, one sensor captures all three colors, by relying on Color Filter Arrays. In order to obtain full resolution color image, missing color components have to be interpolated, i.e. demosaicked, which is more challenging than in the case of lower resolution, due to the increased noise and aberrations. In this paper, we propose a new method, which jointly performs chromatic aberration correction, denoising and demosaicking. By jointly performing the reduction of all artefacts, we are reducing the overall complexity of the system and the introduction of new artefacts. In order to reduce possible flicker we also perform temporal video enhancement. We evaluate the proposed method on a number of publicly available UHD sequences and on sequences recorded in our studio.

Massive star clusters in a z=1 star-forming galaxy seen at a 100 pc scale thanks to strong gravitational lensing

NASA Astrophysics Data System (ADS)

Dessauges-Zavadsky, Miroslava; Cava, Antonio; Richard, Johan; Schaerer, Daniel; Egami, Eiichi

2015-08-01

Deep and high-resolution imaging has revealed clumpy, rest-frame UV morphologies among z=1-3 galaxies. The majority of these galaxies has been shown to be dominated by ordered disk rotation, which led to the conclusion that the observed giant clumps, resolved on kpc-scales, are generated from disk fragmentation due to gravitational instability. State-of-the-art numerical simulations show that they may occupy a relevant role in galaxy evolution, contributing to the galactic bulge formation. Despite the high resolution attained by the most advanced ground- and space-based facilities, as well as in numerical simulations, the intrinsic typical masses and scale sizes of these star-forming clumps remain unconstrained, since they are barely resolved at z=1-3.Thanks to the amplification and stretching power provided by strong gravitational lensing, we are likely to reach the spatial resolving power for unveiling the physics of these star-forming regions. We report on the study of clumpy star formation observed in the Cosmic Snake, a strongly lensed galaxy at z=1, representative of the typical star-forming population close to the peak of Universe activity. About 20 clumps are identified in the HST images. Benefiting from extreme amplification factors up to 100, they are resolved down to an intrinsic scale of 100 pc, never reached before at z=1.The HST multi-wavelength analysis of these individual star clusters allows us to determine their intrinsic physical properties, showing stellar masses (Ms) from 106 to 108.3 Msun, sizes from 100 to 400 pc, and ages from 106 to 108.5 yr. The masses we find are in line with the new, very high resolution numerical simulations, which also suggest that the massive giant clumps previously observed at high redshift with Ms as high as 109-10 Msun may suffer from low resolution effects, being unresolved conglomerates of less massive star clusters. We also compare our results with those of massive young clusters in nearby galaxies. Our approved ALMA observations will reach the same 100 pc scale, which is essential for the study of associated giant molecular clouds in this galaxy.

Singular boundary method for global gravity field modelling

NASA Astrophysics Data System (ADS)

Cunderlik, Robert

2014-05-01

The singular boundary method (SBM) and method of fundamental solutions (MFS) are meshless boundary collocation techniques that use the fundamental solution of a governing partial differential equation (e.g. the Laplace equation) as their basis functions. They have been developed to avoid singular numerical integration as well as mesh generation in the traditional boundary element method (BEM). SBM have been proposed to overcome a main drawback of MFS - its controversial fictitious boundary outside the domain. The key idea of SBM is to introduce a concept of the origin intensity factors that isolate singularities of the fundamental solution and its derivatives using some appropriate regularization techniques. Consequently, the source points can be placed directly on the real boundary and coincide with the collocation nodes. In this study we deal with SBM applied for high-resolution global gravity field modelling. The first numerical experiment presents a numerical solution to the fixed gravimetric boundary value problem. The achieved results are compared with the numerical solutions obtained by MFS or the direct BEM indicating efficiency of all methods. In the second numerical experiments, SBM is used to derive the geopotential and its first derivatives from the Tzz components of the gravity disturbing tensor observed by the GOCE satellite mission. A determination of the origin intensity factors allows to evaluate the disturbing potential and gravity disturbances directly on the Earth's surface where the source points are located. To achieve high-resolution numerical solutions, the large-scale parallel computations are performed on the cluster with 1TB of the distributed memory and an iterative elimination of far zones' contributions is applied.

Numerical Simulation of The Mediterranean Sea Using Diecast: Interaction Between Basin, Sub-basin and Local Scale Features and Natural Variability.

NASA Astrophysics Data System (ADS)

Fernández, V.; Dietrich, D. E.; Haney, R. L.; Tintoré, J.

In situ and satellite data obtained during the last ten years have shown that the circula- tion in the Mediterranean Sea is extremely complex in space, with significant features ranging from mesoscale to sub-basin and basin scale, and highly variable in time, with mesoscale to seasonal and interannual signals. Also, the steep bottom topography and the variable atmospheric conditions from one sub-basin to another, make the circula- tion to be composed of numerous energetic and narrow coastal currents, density fronts and mesoscale structures that interact at sub-basin scale with the large scale circula- tion. To simulate numerically and better understand these features, besides high grid resolution, a low numerical dispersion and low physical dissipation ocean model is required. We present the results from a 1/8z horizontal resolution numerical simula- tion of the Mediterranean Sea using DieCAST ocean model, which meets the above requirements since it is stable with low general dissipation and uses accurate fourth- order-accurate approximations with low numerical dispersion. The simulations are carried out with climatological surface forcing using monthly mean winds and relax- ation towards climatological values of temperature and salinity. The model reproduces the main features of the large basin scale circulation, as well as the seasonal variabil- ity of sub-basin scale currents that are well documented by observations in straits and channels. In addition, DieCAST brings out natural fronts and eddies that usually do not appear in numerical simulations of the Mediterranean and that lead to a natural interannual variability. The role of this intrinsic variability in the general circulation will be discussed.

Sea breeze: Induced mesoscale systems and severe weather

NASA Technical Reports Server (NTRS)

Nicholls, M. E.; Pielke, R. A.; Cotton, W. R.

1990-01-01

Sea-breeze-deep convective interactions over the Florida peninsula were investigated using a cloud/mesoscale numerical model. The objective was to gain a better understanding of sea-breeze and deep convective interactions over the Florida peninsula using a high resolution convectively explicit model and to use these results to evaluate convective parameterization schemes. A 3-D numerical investigation of Florida convection was completed. The Kuo and Fritsch-Chappell parameterization schemes are summarized and evaluated.

Obtaining high-resolution velocity spectra using weighted semblance

NASA Astrophysics Data System (ADS)

Ebrahimi, Saleh; Kahoo, Amin Roshandel; Porsani, Milton J.; Kalateh, Ali Nejati

2017-02-01

Velocity analysis employs coherency measurement along a hyperbolic or non-hyperbolic trajectory time window to build velocity spectra. Accuracy and resolution are strictly related to the method of coherency measurements. Semblance, the most common coherence measure, has poor resolution velocity which affects one's ability to distinguish and pick distinct peaks. Increase the resolution of the semblance velocity spectra causes the accuracy of estimated velocity for normal moveout correction and stacking is improved. The low resolution of semblance spectra depends on its low sensitivity to velocity changes. In this paper, we present a new weighted semblance method that ensures high-resolution velocity spectra. To increase the resolution of semblance spectra, we introduce two weighting functions based on the first to second singular values ratio of the time window and the position of the seismic wavelet in the time window to the semblance equation. We test the method on both synthetic and real field data to compare the resolution of weighted and conventional semblance methods. Numerical examples with synthetic and real seismic data indicate that the new proposed weighted semblance method provides higher resolution than conventional semblance and can separate the reflectors which are mixed in the semblance spectrum.

Numerical simulation of the observed near-surface East India Coastal Current on the continental slope

NASA Astrophysics Data System (ADS)

Mukherjee, A.; Shankar, D.; Chatterjee, Abhisek; Vinayachandran, P. N.

2018-06-01

We simulate the East India Coastal Current (EICC) using two numerical models (resolution 0.1° × 0.1°), an oceanic general circulation model (OGCM) called Modular Ocean Model and a simpler, linear, continuously stratified (LCS) model, and compare the simulated current with observations from moorings equipped with acoustic Doppler current profilers deployed on the continental slope in the western Bay of Bengal (BoB). We also carry out numerical experiments to analyse the processes. Both models simulate well the annual cycle of the EICC, but the performance degrades for the intra-annual and intraseasonal components. In a model-resolution experiment, both models (run at a coarser resolution of 0.25° × 0.25°) simulate well the currents in the equatorial Indian Ocean (EIO), but the performance of the high-resolution LCS model as well as the coarse-resolution OGCM, which is good in the EICC regime, degrades in the eastern and northern BoB. An experiment on forcing mechanisms shows that the annual EICC is largely forced by the local alongshore winds in the western BoB and remote forcing due to Ekman pumping over the BoB, but forcing from the EIO has a strong impact on the intra-annual EICC. At intraseasonal periods, local (equatorial) forcing dominates in the south (north) because the Kelvin wave propagates equatorward in the western BoB. A stratification experiment with the LCS model shows that changing the background stratification from EIO to BoB leads to a stronger surface EICC owing to strong coupling of higher order vertical modes with wind forcing for the BoB profiles. These high-order modes, which lead to energy propagating down into the ocean in the form of beams, are important only for the current and do not contribute significantly to the sea level.

P-CSI v1.0, an accelerated barotropic solver for the high-resolution ocean model component in the Community Earth System Model v2.0

NASA Astrophysics Data System (ADS)

Huang, Xiaomeng; Tang, Qiang; Tseng, Yuheng; Hu, Yong; Baker, Allison H.; Bryan, Frank O.; Dennis, John; Fu, Haohuan; Yang, Guangwen

2016-11-01

In the Community Earth System Model (CESM), the ocean model is computationally expensive for high-resolution grids and is often the least scalable component for high-resolution production experiments. The major bottleneck is that the barotropic solver scales poorly at high core counts. We design a new barotropic solver to accelerate the high-resolution ocean simulation. The novel solver adopts a Chebyshev-type iterative method to reduce the global communication cost in conjunction with an effective block preconditioner to further reduce the iterations. The algorithm and its computational complexity are theoretically analyzed and compared with other existing methods. We confirm the significant reduction of the global communication time with a competitive convergence rate using a series of idealized tests. Numerical experiments using the CESM 0.1° global ocean model show that the proposed approach results in a factor of 1.7 speed-up over the original method with no loss of accuracy, achieving 10.5 simulated years per wall-clock day on 16 875 cores.

A NON-OSCILLATORY SCHEME FOR OPEN CHANNEL FLOWS. (R825200)

EPA Science Inventory

In modeling shocks in open channel flows, the traditional finite difference schemes become inefficient and warrant special numerical treatment for smooth computations. This paper provides a general introduction to the non-oscillatory high-resolution methodology, coupled with the ...

A general-purpose computer program for studying ultrasonic beam patterns generated with acoustic lenses

NASA Technical Reports Server (NTRS)

Roberti, Dino; Ludwig, Reinhold; Looft, Fred J.

1988-01-01

A 3-D computer model of a piston radiator with lenses for focusing and defocusing is presented. To achieve high-resolution imaging, the frequency of the transmitted and received ultrasound must be as high as 10 MHz. Current ultrasonic transducers produce an extremely narrow beam at these high frequencies and thus are not appropriate for imaging schemes such as synthetic-aperture focus techniques (SAFT). Consequently, a numerical analysis program has been developed to determine field intensity patterns that are radiated from ultrasonic transducers with lenses. Lens shapes are described and the field intensities are numerically predicted and compared with experimental results.

Explicit and implicit compact high-resolution shock-capturing methods for multidimensional Euler equations 1: Formulation

NASA Technical Reports Server (NTRS)

Yee, H. C.

1995-01-01

Two classes of explicit compact high-resolution shock-capturing methods for the multidimensional compressible Euler equations for fluid dynamics are constructed. Some of these schemes can be fourth-order accurate away from discontinuities. For the semi-discrete case their shock-capturing properties are of the total variation diminishing (TVD), total variation bounded (TVB), total variation diminishing in the mean (TVDM), essentially nonoscillatory (ENO), or positive type of scheme for 1-D scalar hyperbolic conservation laws and are positive schemes in more than one dimension. These fourth-order schemes require the same grid stencil as their second-order non-compact cousins. One class does not require the standard matrix inversion or a special numerical boundary condition treatment associated with typical compact schemes. Due to the construction, these schemes can be viewed as approximations to genuinely multidimensional schemes in the sense that they might produce less distortion in spherical type shocks and are more accurate in vortex type flows than schemes based purely on one-dimensional extensions. However, one class has a more desirable high-resolution shock-capturing property and a smaller operation count in 3-D than the other class. The extension of these schemes to coupled nonlinear systems can be accomplished using the Roe approximate Riemann solver, the generalized Steger and Warming flux-vector splitting or the van Leer type flux-vector splitting. Modification to existing high-resolution second- or third-order non-compact shock-capturing computer codes is minimal. High-resolution shock-capturing properties can also be achieved via a variant of the second-order Lax-Friedrichs numerical flux without the use of Riemann solvers for coupled nonlinear systems with comparable operations count to their classical shock-capturing counterparts. The simplest extension to viscous flows can be achieved by using the standard fourth-order compact or non-compact formula for the viscous terms.

A Study of the Unstable Modes in High Mach Number Gaseous Jets and Shear Layers

NASA Astrophysics Data System (ADS)

Bassett, Gene Marcel

1993-01-01

Instabilities affecting the propagation of supersonic gaseous jets have been studied using high resolution computer simulations with the Piecewise-Parabolic-Method (PPM). These results are discussed in relation to jets from galactic nuclei. These studies involve a detailed treatment of a single section of a very long jet, approximating the dynamics by using periodic boundary conditions. Shear layer simulations have explored the effects of shear layers on the growth of nonlinear instabilities. Convergence of the numerical approximations has been tested by comparing jet simulations with different grid resolutions. The effects of initial conditions and geometry on the dominant disruptive instabilities have also been explored. Simulations of shear layers with a variety of thicknesses, Mach numbers and densities perturbed by incident sound waves imply that the time for the excited kink modes to grow large in amplitude and disrupt the shear layer is taug = (546 +/- 24) (M/4)^{1.7 } (Apert/0.02) ^{-0.4} delta/c, where M is the jet Mach number, delta is the half-width of the shear layer, and A_ {pert} is the perturbation amplitude. For simulations of periodic jets, the initial velocity perturbations set up zig-zag shock patterns inside the jet. In each case a single zig-zag shock pattern (an odd mode) or a double zig-zag shock pattern (an even mode) grows to dominate the flow. The dominant kink instability responsible for these shock patterns moves approximately at the linear resonance velocity, nu_ {mode} = cextnu_ {relative}/(cjet + c_ {ext}). For high resolution simulations (those with 150 or more computational zones across the jet width), the even mode dominates if the even penetration is higher in amplitude initially than the odd perturbation. For low resolution simulations, the odd mode dominates even for a stronger even mode perturbation. In high resolution simulations the jet boundary rolls up and large amounts of external gas are entrained into the jet. In low resolution simulations this entrainment process is impeded by numerical viscosity. The three-dimensional jet simulations behave similarly to two-dimensional jet runs with the same grid resolutions.

The numerical modeling the sensitivity of coastal wind and ozone concentration to different SST forcing

NASA Astrophysics Data System (ADS)

Choi, Hyun-Jung; Lee, Hwa Woon; Jeon, Won-Bae; Lee, Soon-Hwan

2012-01-01

This study evaluated an atmospheric and air quality model of the spatial variability in low-level coastal winds and ozone concentration, which are affected by sea surface temperature (SST) forcing with different thermal gradients. Several numerical experiments examined the effect of sea surface SST forcing on the coastal atmosphere and air quality. In this study, the RAMS-CAMx model was used to estimate the sensitivity to two different resolutions of SST forcing during the episode day as well as to simulate the low-level coastal winds and ozone concentration over a complex coastal area. The regional model reproduced the qualitative effect of SST forcing and thermal gradients on the coastal flow. The high-resolution SST derived from NGSST-O (New Generation Sea Surface Temperature Open Ocean) forcing to resolve the warm SST appeared to enhance the mean response of low-level winds to coastal regions. These wind variations have important implications for coastal air quality. A higher ozone concentration was forecasted when SST data with a high resolution was used with the appropriate limitation of temperature, regional wind circulation, vertical mixing height and nocturnal boundary layer (NBL) near coastal areas.

Three-dimensional representation of the human cochlea using micro-computed tomography data: presenting an anatomical model for further numerical calculations.

PubMed

Braun, Katharina; Böhnke, Frank; Stark, Thomas

2012-06-01

We present a complete geometric model of the human cochlea, including the segmentation and reconstruction of the fluid-filled chambers scala tympani and scala vestibuli, the lamina spiralis ossea and the vibrating structure (cochlear partition). Future fluid-structure coupled simulations require a reliable geometric model of the cochlea. The aim of this study was to present an anatomical model of the human cochlea, which can be used for further numerical calculations. Using high resolution micro-computed tomography (µCT), we obtained images of a cut human temporal bone with a spatial resolution of 5.9 µm. Images were manually segmented to obtain the three-dimensional reconstruction of the cochlea. Due to the high resolution of the µCT data, a detailed examination of the geometry of the twisted cochlear partition near the oval and the round window as well as the precise illustration of the helicotrema was possible. After reconstruction of the lamina spiralis ossea, the cochlear partition and the curved geometry of the scala vestibuli and the scala tympani were presented. The obtained data sets were exported as standard lithography (stl) files. These files represented a complete framework for future numerical simulations of mechanical (acoustic) wave propagation on the cochlear partition in the form of mathematical mechanical cochlea models. Additional quantitative information concerning heights, lengths and volumes of the scalae was found and compared with previous results.

The sensitivity of precipitation simulations to the soot aerosol presence

NASA Astrophysics Data System (ADS)

Palamarchuk, Iuliia; Ivanov, Sergiy; Mahura, Alexander; Ruban, Igor

2016-04-01

The role of aerosols in nonlinear feedbacks on atmospheric processes is in a focus of many researches. Particularly, the importance of black carbon particles for evolution of physical weather including precipitation formation and release is investigated by numerical modelling as well as observation networks. However, certain discrepancies between results obtained by different methods are remained. The increasing of complexity in numerical weather modelling systems leads to enlarging a volume of output data and promises to reveal new aspects in complexity of interactions and feedbacks. The Harmonie-38h1.2 model with the AROME physical package is used to study changes in precipitation life-cycle under black carbon polluted conditions. A model configuration includes a radar data assimilation procedure on a high resolution domain covering the Scandinavia region. Model results show that precipitation rate and distribution as well as other variables of atmospheric dynamics and physics over the domain are sensitive to aerosol concentrations. The attention should also be paid to numerical aspects, such as a list of observation types involved in assimilation. The use of high resolution radar information allows to include mesoscale features in initial conditions and to decrease the growth rate of a model error with the lead time.

Changing the scale of hydrogeophysical aquifer heterogeneity characterization

NASA Astrophysics Data System (ADS)

Paradis, Daniel; Tremblay, Laurie; Ruggeri, Paolo; Brunet, Patrick; Fabien-Ouellet, Gabriel; Gloaguen, Erwan; Holliger, Klaus; Irving, James; Molson, John; Lefebvre, Rene

2015-04-01

Contaminant remediation and management require the quantitative predictive capabilities of groundwater flow and mass transport numerical models. Such models have to encompass source zones and receptors, and thus typically cover several square kilometers. To predict the path and fate of contaminant plumes, these models have to represent the heterogeneous distribution of hydraulic conductivity (K). However, hydrogeophysics has generally been used to image relatively restricted areas of the subsurface (small fractions of km2), so there is a need for approaches defining heterogeneity at larger scales and providing data to constrain conceptual and numerical models of aquifer systems. This communication describes a workflow defining aquifer heterogeneity that was applied over a 12 km2 sub-watershed surrounding a decommissioned landfill emitting landfill leachate. The aquifer is a shallow, 10 to 20 m thick, highly heterogeneous and anisotropic assemblage of littoral sand and silt. Field work involved the acquisition of a broad range of data: geological, hydraulic, geophysical, and geochemical. The emphasis was put on high resolution and continuous hydrogeophysical data, the use of direct-push fully-screened wells and the acquisition of targeted high-resolution hydraulic data covering the range of observed aquifer materials. The main methods were: 1) surface geophysics (ground-penetrating radar and electrical resistivity); 2) direct-push operations with a geotechnical drilling rig (cone penetration tests with soil moisture resistivity CPT/SMR; full-screen well installation); and 3) borehole operations, including high-resolution hydraulic tests and geochemical sampling. New methods were developed to acquire high vertical resolution hydraulic data in direct-push wells, including both vertical and horizontal K (Kv and Kh). Various data integration approaches were used to represent aquifer properties in 1D, 2D and 3D. Using relevant vector machines (RVM), the mechanical and geophysical CPT/SMR measurements were used to recognize hydrofacies (HF) and obtain high-resolution 1D vertical profiles of hydraulic properties. Bayesian sequential simulation of the low-resolution surface-based geoelectrical measurements as well as high-resolution direct-push measurements of the electrical and hydraulic conductivities provided realistic estimates of the spatial distribution of K on a 250-m-long 2D survey line. Following a similar approach, all 1D vertical profiles of K derived from CPT/SMR soundings were integrated with available 2D geoelectrical profiles to obtain the 3D distribution of K over the study area. Numerical models were developed to understand flow and mass transport and assess how indicators could constrain model results and their K distributions. A 2D vertical section model was first developed based on a conceptual representation of heterogeneity which showed a significant effect of layering on flow and transport. The model demonstrated that solute and age tracers provide key model constraints. Additional 2D vertical section models with synthetic representations of low and high K hydrofacies were also developed on the basis of CPT/SMR soundings. These models showed that high-resolution profiles of hydraulic head could help constrain the spatial distribution and continuity of hydrofacies. History matching approaches are still required to simulate geostatistical models of K using hydrogeophysical data, while considering their impact on flow and transport with constraints provided by tracers of solutes and groundwater age.

Dual-TRACER: High resolution fMRI with constrained evolution reconstruction.

PubMed

Li, Xuesong; Ma, Xiaodong; Li, Lyu; Zhang, Zhe; Zhang, Xue; Tong, Yan; Wang, Lihong; Sen Song; Guo, Hua

2018-01-01

fMRI with high spatial resolution is beneficial for studies in psychology and neuroscience, but is limited by various factors such as prolonged imaging time, low signal to noise ratio and scarcity of advanced facilities. Compressed Sensing (CS) based methods for accelerating fMRI data acquisition are promising. Other advanced algorithms like k-t FOCUSS or PICCS have been developed to improve performance. This study aims to investigate a new method, Dual-TRACER, based on Temporal Resolution Acceleration with Constrained Evolution Reconstruction (TRACER), for accelerating fMRI acquisitions using golden angle variable density spiral. Both numerical simulations and in vivo experiments at 3T were conducted to evaluate and characterize this method. Results show that Dual-TRACER can provide functional images with a high spatial resolution (1×1mm 2 ) under an acceleration factor of 20 while maintaining hemodynamic signals well. Compared with other investigated methods, dual-TRACER provides a better signal recovery, higher fMRI sensitivity and more reliable activation detection. Copyright © 2017 Elsevier Inc. All rights reserved.

High-resolution numerical approximation of traffic flow problems with variable lanes and free-flow velocities.

PubMed

Zhang, Peng; Liu, Ru-Xun; Wong, S C

2005-05-01

This paper develops macroscopic traffic flow models for a highway section with variable lanes and free-flow velocities, that involve spatially varying flux functions. To address this complex physical property, we develop a Riemann solver that derives the exact flux values at the interface of the Riemann problem. Based on this solver, we formulate Godunov-type numerical schemes to solve the traffic flow models. Numerical examples that simulate the traffic flow around a bottleneck that arises from a drop in traffic capacity on the highway section are given to illustrate the efficiency of these schemes.

Improving lateral resolution and image quality of optical coherence tomography by the multi-frame superresolution technique for 3D tissue imaging.

PubMed

Shen, Kai; Lu, Hui; Baig, Sarfaraz; Wang, Michael R

2017-11-01

The multi-frame superresolution technique is introduced to significantly improve the lateral resolution and image quality of spectral domain optical coherence tomography (SD-OCT). Using several sets of low resolution C-scan 3D images with lateral sub-spot-spacing shifts on different sets, the multi-frame superresolution processing of these sets at each depth layer reconstructs a higher resolution and quality lateral image. Layer by layer processing yields an overall high lateral resolution and quality 3D image. In theory, the superresolution processing including deconvolution can solve the diffraction limit, lateral scan density and background noise problems together. In experiment, the improved lateral resolution by ~3 times reaching 7.81 µm and 2.19 µm using sample arm optics of 0.015 and 0.05 numerical aperture respectively as well as doubling the image quality has been confirmed by imaging a known resolution test target. Improved lateral resolution on in vitro skin C-scan images has been demonstrated. For in vivo 3D SD-OCT imaging of human skin, fingerprint and retina layer, we used the multi-modal volume registration method to effectively estimate the lateral image shifts among different C-scans due to random minor unintended live body motion. Further processing of these images generated high lateral resolution 3D images as well as high quality B-scan images of these in vivo tissues.

Direct Numerical Simulation of Cell Printing

NASA Astrophysics Data System (ADS)

Qiao, Rui; He, Ping

2010-11-01

Structural cell printing, i.e., printing three dimensional (3D) structures of cells held in a tissue matrix, is gaining significant attention in the biomedical community. The key idea is to use desktop printer or similar devices to print cells into 3D patterns with a resolution comparable to the size of mammalian cells, similar to that in living organs. Achieving such a resolution in vitro can lead to breakthroughs in areas such as organ transplantation and understanding of cell-cell interactions in truly 3D spaces. Although the feasibility of cell printing has been demonstrated in the recent years, the printing resolution and cell viability remain to be improved. In this work, we investigate one of the unit operations in cell printing, namely, the impact of a cell-laden droplet into a pool of highly viscous liquids using direct numerical simulations. The dynamics of droplet impact (e.g., crater formation and droplet spreading and penetration) and the evolution of cell shape and internal stress are quantified in details.

The MM5 Numerical Model to Correct PSInSAR Atmospheric Phase Screen

NASA Astrophysics Data System (ADS)

Perissin, D.; Pichelli, E.; Ferretti, R.; Rocca, F.; Pierdicca, N.

2010-03-01

In this work we make an experimental analysis to research the capability of Numerical Weather Prediction (NWP) models as MM5 to produce high resolution (1km-500m) maps of Integrated Water Vapour (IWV) in the atmosphere to mitigate the well-known disturbances that affect the radar signal while travelling from the sensor to the ground and back. Experiments have been conducted over the area surrounding Rome using ERS data acquired during the three days phase in '94 and using Envisat data acquired in recent years. By means of the PS technique SAR data have been processed and the Atmospheric Phase Screen (APS) of Slave images with respect to a reference Master have been extracted. MM5 IWV maps have a much lower resolution than PSInSAR APS's: the turbulent term of the atmospheric vapour field cannot be well resolved by MM5, at least with the low resolution ECMWF inputs. However, the vapour distribution term that depends on the local topography has been found quite in accordance.

Advanced Secure Optical Image Processing for Communications

NASA Astrophysics Data System (ADS)

Al Falou, Ayman

2018-04-01

New image processing tools and data-processing network systems have considerably increased the volume of transmitted information such as 2D and 3D images with high resolution. Thus, more complex networks and long processing times become necessary, and high image quality and transmission speeds are requested for an increasing number of applications. To satisfy these two requests, several either numerical or optical solutions were offered separately. This book explores both alternatives and describes research works that are converging towards optical/numerical hybrid solutions for high volume signal and image processing and transmission. Without being limited to hybrid approaches, the latter are particularly investigated in this book in the purpose of combining the advantages of both techniques. Additionally, pure numerical or optical solutions are also considered since they emphasize the advantages of one of the two approaches separately.

Comparing Magnetic Resonance Imaging and High-Resolution Dynamic Ultrasonography for Diagnosis of Plantar Plate Pathology: A Case Series.

PubMed

Donegan, Ryan J; Stauffer, Anthony; Heaslet, Michael; Poliskie, Michael

Plantar plate pathology has gained noticeable attention in recent years as an etiology of lesser metatarsophalangeal joint pain. The heightened clinical awareness has led to the need for more effective diagnostic imaging accuracy. Numerous reports have established the accuracy of both magnetic resonance imaging and ultrasonography for the diagnosis of plantar plate pathology. However, no conclusions have been made regarding which is the superior imaging modality. The present study reports a case series directly comparing high-resolution dynamic ultrasonography and magnetic resonance imaging. A multicenter retrospective comparison of magnetic resonance imaging versus high-resolution dynamic ultrasonography to evaluate plantar plate pathology with surgical confirmation was conducted. The sensitivity, specificity, and positive and negative predictive values for magnetic resonance imaging were 60%, 100%, 100%, and 33%, respectively. The overall diagnostic accuracy compared with the intraoperative findings was 66%. The sensitivity, specificity, and positive and negative predictive values for high-resolution dynamic ultrasound imaging were 100%, 100%, 100%, and 100%, respectively. The overall diagnostic accuracy compared with the intraoperative findings was 100%. The p value using Fisher's exact test for magnetic resonance imaging and high-resolution dynamic ultrasonography was p = .45, a difference that was not statistically significant. High-resolution dynamic ultrasonography had greater accuracy than magnetic resonance imaging in diagnosing lesser metatarsophalangeal joint plantar plate pathology, although the difference was not statistically significant. The present case series suggests that high-resolution dynamic ultrasonography can be considered an equally accurate imaging modality for plantar plate pathology at a potential cost savings compared with magnetic resonance imaging. Therefore, high-resolution dynamic ultrasonography warrants further investigation in a prospective study. Copyright © 2016 American College of Foot and Ankle Surgeons. Published by Elsevier Inc. All rights reserved.

The Space-Time Conservation Element and Solution Element Method: A New High-Resolution and Genuinely Multidimensional Paradigm for Solving Conservation Laws. 1; The Two Dimensional Time Marching Schemes

NASA Technical Reports Server (NTRS)

Chang, Sin-Chung; Wang, Xiao-Yen; Chow, Chuen-Yen

1998-01-01

A new high resolution and genuinely multidimensional numerical method for solving conservation laws is being, developed. It was designed to avoid the limitations of the traditional methods. and was built from round zero with extensive physics considerations. Nevertheless, its foundation is mathmatically simple enough that one can build from it a coherent, robust. efficient and accurate numerical framework. Two basic beliefs that set the new method apart from the established methods are at the core of its development. The first belief is that, in order to capture physics more efficiently and realistically, the modeling, focus should be placed on the original integral form of the physical conservation laws, rather than the differential form. The latter form follows from the integral form under the additional assumption that the physical solution is smooth, an assumption that is difficult to realize numerically in a region of rapid chance. such as a boundary layer or a shock. The second belief is that, with proper modeling of the integral and differential forms themselves, the resulting, numerical solution should automatically be consistent with the properties derived front the integral and differential forms, e.g., the jump conditions across a shock and the properties of characteristics. Therefore a much simpler and more robust method can be developed by not using the above derived properties explicitly.

The precipitation forecast sensitivity to data assimilation on a very high resolution domain

NASA Astrophysics Data System (ADS)

Palamarchuk, Iuliia; Ivanov, Sergiy; Ruban, Igor

2016-04-01

Last developments in computing technologies allow the implementation of a very high resolution in numerical weather prediction models. Due to that fact, simulation and quantitative analysis of mesoscale processes with a horizontal scale of few kilometers become available. This is crucially important in studies of precipitation including their life-cycle. However, new opportunities generate prerequisites to revising existing knowledge, both in meteorology and numerics. The latter associates, in particular, with formulation of the initial conditions involving the data assimilation. Depending on applied techniques, observational data types and spatial resolution the precipitation prediction appears quite sensitive. The impact of the data assimilation on resulting fields is presented using the Harmonie-38h1.2 model with the AROME physical package. The numerical experiments were performed for the Finland domain with the horizontal grid of 2.5 km and 65 vertical levels for the August 2010 period covering the BaltRad experiment. The initial conditions formulation included downscaling from the MARS archive and involving observations through 3DVAR data assimilation. The treatment of both conventional and radar observations in numerical experiments was used. The earlier included the SYNOP, SHIP, PILOT, TEMP, AIREP and DRIBU types. The background error covariances required for the variational assimilation have already been computed from the ensemble perturbed analysis with the purely statistical balance by the HIRLAM community. Deviations among the model runs started from the MARS, conventional and radar data assimilation were complex. In the focus therefore is to know how the model system reacts on involvement of observations. The contribution from observed variables included in the control vector, such as humidity and temperature, was expected to be largest. Nevertheless, revealing of such impact is not so straightforward task. Major changes occur within the lower 3-km layer of the atmosphere for all predicted variables. However, those changes were not directly associated with observation locations, as it often shows single observation experiments. Moreover, the model response to observations with lead time produces weak mesoscale spots of opposite signs. Special attention is paid to precipitation, cloud and rain water, vertical velocity fields. A complex chain of interactions among radiation, temperature, humidity, stratification and other atmospheric characteristics results in changes of local updraft and downdraft flows and following cloud formation processes and precipitation release. One can assume that those features would arise due to both, atmospheric physics and numeric effects. The latter becomes more evident in simulations on very high resolution domains.

Spectral characteristics of background error covariance and multiscale data assimilation

DOE PAGES

Li, Zhijin; Cheng, Xiaoping; Gustafson, Jr., William I.; ...

2016-05-17

The steady increase of the spatial resolutions of numerical atmospheric and oceanic circulation models has occurred over the past decades. Horizontal grid spacing down to the order of 1 km is now often used to resolve cloud systems in the atmosphere and sub-mesoscale circulation systems in the ocean. These fine resolution models encompass a wide range of temporal and spatial scales, across which dynamical and statistical properties vary. In particular, dynamic flow systems at small scales can be spatially localized and temporarily intermittent. Difficulties of current data assimilation algorithms for such fine resolution models are numerically and theoretically examined. Ourmore » analysis shows that the background error correlation length scale is larger than 75 km for streamfunctions and is larger than 25 km for water vapor mixing ratios, even for a 2-km resolution model. A theoretical analysis suggests that such correlation length scales prevent the currently used data assimilation schemes from constraining spatial scales smaller than 150 km for streamfunctions and 50 km for water vapor mixing ratios. Moreover, our results highlight the need to fundamentally modify currently used data assimilation algorithms for assimilating high-resolution observations into the aforementioned fine resolution models. Lastly, within the framework of four-dimensional variational data assimilation, a multiscale methodology based on scale decomposition is suggested and challenges are discussed.« less

Progress and Challenges in SPH Simulations of Disk Galaxy Formation: The Combined Role of Resolution and the Star Formation Density Threshold

NASA Astrophysics Data System (ADS)

Mayer, L.

2012-07-01

We review progress in cosmological SPH simulations of disk galaxy formation. We discuss the role of numerical resolution and sub-grid recipes of star formation and feedback from supernovae, higlighting the important role of a high star formation density threshold comparable to that of star forming molecular gas phase. Two recent succesfull examples, in simulations of the formation of gas-rich bulgeless dwarf galaxies and in simulations of late-type spirals (the ERIS simulations), are presented and discussed. In the ERIS simulations, already in the progenitors at z = 3 the resolution is above the threshold indicated by previous idealized numerical experiments as necessary to minimize numerical angular momentum loss (Kaufmann et al. 2007). A high star formation density threshold maintains an inhomogeneous interstellar medium, where star formation is clustered, and thus the local effect of supernovae feedback is enhanced. As a result, outflows are naturally generated removing 2/3 of the baryons in galaxies with Vvir˜50 km/s and ˜ 30% of the baryons in galaxies with (Vvir ˜ 150 km/s). Low angular momentum baryons are preferentially removed since the strongest bursts of star formation occur predominantly near the center, especially after a merger event. This produces pure exponential disks or small bulges depending on galaxy mass, and, correspondingly, slowly rising or nearly flat rotation curves that match those of observed disk galaxies. In dwarfs the rapid mass removal by outflows generates a core-like distribution in the dark matter. Furthermore, contrary to the common picture, in the ERIS spiral galaxies a bar/pseudobulge forms rapidly, and not secularly, as a result of mergers and interactions at high-z.

Cavitation erosion prediction based on analysis of flow dynamics and impact load spectra

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mihatsch, Michael S., E-mail: michael.mihatsch@aer.mw.tum.de; Schmidt, Steffen J.; Adams, Nikolaus A.

2015-10-15

Cavitation erosion is the consequence of repeated collapse-induced high pressure-loads on a material surface. The present paper assesses the prediction of impact load spectra of cavitating flows, i.e., the rate and intensity distribution of collapse events based on a detailed analysis of flow dynamics. Data are obtained from a numerical simulation which employs a density-based finite volume method, taking into account the compressibility of both phases, and resolves collapse-induced pressure waves. To determine the spectrum of collapse events in the fluid domain, we detect and quantify the collapse of isolated vapor structures. As reference configuration we consider the expansion ofmore » a liquid into a radially divergent gap which exhibits unsteady sheet and cloud cavitation. Analysis of simulation data shows that global cavitation dynamics and dominant flow events are well resolved, even though the spatial resolution is too coarse to resolve individual vapor bubbles. The inviscid flow model recovers increasingly fine-scale vapor structures and collapses with increasing resolution. We demonstrate that frequency and intensity of these collapse events scale with grid resolution. Scaling laws based on two reference lengths are introduced for this purpose. We show that upon applying these laws impact load spectra recorded on experimental and numerical pressure sensors agree with each other. Furthermore, correlation between experimental pitting rates and collapse-event rates is found. Locations of high maximum wall pressures and high densities of collapse events near walls obtained numerically agree well with areas of erosion damage in the experiment. The investigation shows that impact load spectra of cavitating flows can be inferred from flow data that captures the main vapor structures and wave dynamics without the need for resolving all flow scales.« less

Wavelength scanning achieves pixel super-resolution in holographic on-chip microscopy

NASA Astrophysics Data System (ADS)

Luo, Wei; Göröcs, Zoltan; Zhang, Yibo; Feizi, Alborz; Greenbaum, Alon; Ozcan, Aydogan

2016-03-01

Lensfree holographic on-chip imaging is a potent solution for high-resolution and field-portable bright-field imaging over a wide field-of-view. Previous lensfree imaging approaches utilize a pixel super-resolution technique, which relies on sub-pixel lateral displacements between the lensfree diffraction patterns and the image sensor's pixel-array, to achieve sub-micron resolution under unit magnification using state-of-the-art CMOS imager chips, commonly used in e.g., mobile-phones. Here we report, for the first time, a wavelength scanning based pixel super-resolution technique in lensfree holographic imaging. We developed an iterative super-resolution algorithm, which generates high-resolution reconstructions of the specimen from low-resolution (i.e., under-sampled) diffraction patterns recorded at multiple wavelengths within a narrow spectral range (e.g., 10-30 nm). Compared with lateral shift-based pixel super-resolution, this wavelength scanning approach does not require any physical shifts in the imaging setup, and the resolution improvement is uniform in all directions across the sensor-array. Our wavelength scanning super-resolution approach can also be integrated with multi-height and/or multi-angle on-chip imaging techniques to obtain even higher resolution reconstructions. For example, using wavelength scanning together with multi-angle illumination, we achieved a halfpitch resolution of 250 nm, corresponding to a numerical aperture of 1. In addition to pixel super-resolution, the small scanning steps in wavelength also enable us to robustly unwrap phase, revealing the specimen's optical path length in our reconstructed images. We believe that this new wavelength scanning based pixel super-resolution approach can provide competitive microscopy solutions for high-resolution and field-portable imaging needs, potentially impacting tele-pathology applications in resource-limited-settings.

First results of high-resolution modeling of Cenozoic subduction orogeny in Andes

NASA Astrophysics Data System (ADS)

Liu, S.; Sobolev, S. V.; Babeyko, A. Y.; Krueger, F.; Quinteros, J.; Popov, A.

2016-12-01

The Andean Orogeny is the result of the upper-plate crustal shortening during the Cenozoic Nazca plate subduction beneath South America plate. With up to 300 km shortening, the Earth's second highest Altiplano-Puna Plateau was formed with a pronounced N-S oriented deformation diversity. Furthermore, the tectonic shortening in the Southern Andes was much less intensive and started much later. The mechanism of the shortening and the nature of N-S variation of its magnitude remain controversial. The previous studies of the Central Andes suggested that they might be related to the N-S variation in the strength of the lithosphere, friction coupling at slab interface, and are probably influenced by the interaction of the climate and tectonic systems. However, the exact nature of the strength variation was not explored due to the lack of high numerical resolution and 3D numerical models at that time. Here we will employ large-scale subduction models with a high resolution to reveal and quantify the factors controlling the strength of lithospheric structures and their effect on the magnitude of tectonic shortening in the South America plate between 18°-35°S. These high-resolution models are performed by using the highly scalable parallel 3D code LaMEM (Lithosphere and Mantle Evolution Model). This code is based on finite difference staggered grid approach and employs massive linear and non-linear solvers within the PETSc library to complete high-performance MPI-based parallelization in geodynamic modeling. Currently, in addition to benchmark-models we are developing high-resolution (< 1km) 2D subduction models with application to Nazca-South America convergence. In particular, we will present the models focusing on the effect of friction reduction in the Paleozoic-Cenozoic sediments above the uppermost crust in the Subandean Ranges. Future work will be focused on the origin of different styles of deformation and topography evolution in Altiplano-Puna Plateau and Central-Southern Andes through 3D modeling of large-scale interaction of subducting and overriding plates.

Atomic magnetometer-based ultra-sensitive magnetic microscopy

NASA Astrophysics Data System (ADS)

Kim, Young Jin; Savukov, Igor

2016-03-01

An atomic magnetometer (AM) based on lasers and alkali-metal vapor cells is currently the most sensitive non-cryogenic magnetic-field sensor. Many applications in neuroscience and other fields require high resolution, high sensitivity magnetic microscopic measurements. In order to meet this need we combined a cm-size spin-exchange relaxation-free AM with a flux guide (FG) to produce an ultra-sensitive FG-AM magnetic microscope. The FG serves to transmit the target magnetic flux to the AM thus enhancing both the sensitivity and resolution for tiny magnetic objects. In this talk, we will describe a prototype FG-AM device and present experimental and numerical tests of its sensitivity and resolution. We also demonstrate that an optimized FG-AM achieves high resolution and high sensitivity sufficient to detect a magnetic field of a single neuron in a few seconds, which would be an important milestone in neuroscience. We anticipate that this unique device can be applied to the detection of a single neuron, the detection of magnetic nano-particles, which in turn are very important for detection of target molecules in national security and medical diagnostics, and non-destructive testing.

Evaluation of coarse scale land surface remote sensing albedo product over rugged terrain

NASA Astrophysics Data System (ADS)

Wen, J.; Xinwen, L.; You, D.; Dou, B.

2017-12-01

Satellite derived Land surface albedo is an essential climate variable which controls the earth energy budget and it can be used in applications such as climate change, hydrology, and numerical weather prediction. The accuracy and uncertainty of surface albedo products should be evaluated with a reliable reference truth data prior to applications. And more literatures investigated the validation methods about the albedo validation in a flat or homogenous surface. However, the albedo performance over rugged terrain is still unknow due to the validation method limited. A multi-validation strategy is implemented to give a comprehensive albedo validation, which will involve the high resolution albedo processing, high resolution albedo validation based on in situ albedo, and the method to upscale the high resolution albedo to a coarse scale albedo. Among them, the high resolution albedo generation and the upscale method is the core step for the coarse scale albedo validation. In this paper, the high resolution albedo is generated by Angular Bin algorithm. And a albedo upscale method over rugged terrain is developed to obtain the coarse scale albedo truth. The in situ albedo located 40 sites in mountain area are selected globally to validate the high resolution albedo, and then upscaled to the coarse scale albedo by the upscale method. This paper takes MODIS and GLASS albedo product as a example, and the prelimarily results show the RMSE of MODIS and GLASS albedo product over rugged terrain are 0.047 and 0.057, respectively under the RMSE with 0.036 of high resolution albedo.

High-Resolution Simulations of Gas-Solids Jet Penetration Into a High Density Riser Flow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Tingwen

2011-05-01

High-resolution simulations of a gas-solids jet in a 0.3 m diameter and 15.9 m tall circulating fluidized bed (CFB) riser were conducted with the open source software-MFIX. In the numerical simulations, both gas and solids injected through a 1.6 cm diameter radial-directed tube 4.3 m above the bottom distributor were tracked as tracers, which enable the analysis of the characteristics of a two-phase jet. Two jetting gas velocities of 16.6 and 37.2 m/s were studied with the other operating conditions fixed. Reasonable flow hydrodynamics with respect to overall pressure drop, voidage, and solids velocity distributions were predicted. Due to themore » different dynamic responses of gas and particles to the crossflow, a significant separation of gas and solids within the jet region was predicted for both cases. In addition, the jet characteristics based on tracer concentration and tracer mass fraction profiles at different downstream levels are discussed. Overall, the numerical predictions compare favorably to the experimental measurements made at NETL.« less

Controlling Reflections from Mesh Refinement Interfaces in Numerical Relativity

NASA Technical Reports Server (NTRS)

Baker, John G.; Van Meter, James R.

2005-01-01

A leading approach to improving the accuracy on numerical relativity simulations of black hole systems is through fixed or adaptive mesh refinement techniques. We describe a generic numerical error which manifests as slowly converging, artificial reflections from refinement boundaries in a broad class of mesh-refinement implementations, potentially limiting the effectiveness of mesh- refinement techniques for some numerical relativity applications. We elucidate this numerical effect by presenting a model problem which exhibits the phenomenon, but which is simple enough that its numerical error can be understood analytically. Our analysis shows that the effect is caused by variations in finite differencing error generated across low and high resolution regions, and that its slow convergence is caused by the presence of dramatic speed differences among propagation modes typical of 3+1 relativity. Lastly, we resolve the problem, presenting a class of finite-differencing stencil modifications which eliminate this pathology in both our model problem and in numerical relativity examples.

Cubic spline anchored grid pattern algorithm for high-resolution detection of subsurface cavities by the IR-CAT method

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kassab, A.J.; Pollard, J.E.

An algorithm is presented for the high-resolution detection of irregular-shaped subsurface cavities within irregular-shaped bodies by the IR-CAT method. The theoretical basis of the algorithm is rooted in the solution of an inverse geometric steady-state heat conduction problem. A Cauchy boundary condition is prescribed at the exposed surface, and the inverse geometric heat conduction problem is formulated by specifying the thermal condition at the inner cavities walls, whose unknown geometries are to be detected. The location of the inner cavities is initially estimated, and the domain boundaries are discretized. Linear boundary elements are used in conjunction with cubic splines formore » high resolution of the cavity walls. An anchored grid pattern (AGP) is established to constrain the cubic spline knots that control the inner cavity geometry to evolve along the AGP at each iterative step. A residual is defined measuring the difference between imposed and computed boundary conditions. A Newton-Raphson method with a Broyden update is used to automate the detection of inner cavity walls. During the iterative procedure, the movement of the inner cavity walls is restricted to physically realistic intermediate solutions. Numerical simulation demonstrates the superior resolution of the cubic spline AGP algorithm over the linear spline-based AGP in the detection of an irregular-shaped cavity. Numerical simulation is also used to test the sensitivity of the linear and cubic spline AGP algorithms by simulating bias and random error in measured surface temperature. The proposed AGP algorithm is shown to satisfactorily detect cavities with these simulated data.« less

Inference of physical/biological dynamics from synthetic ocean colour images

NASA Technical Reports Server (NTRS)

Eert, J.; Holloway, G.; Gower, J. F. R.; Denman, K.; Abbott, M.

1987-01-01

High resolution numerical experiments with well resolved eddies are performed including advection of a biologically active plankton field. Shelf wave propagation and bottom topographic features are included. The resulting synthetic ocean color fields are examined for sensitivity to the (known) underlying physical dynamics.

Numerical solution of the exterior oblique derivative BVP using the direct BEM formulation

NASA Astrophysics Data System (ADS)

Čunderlík, Róbert; Špir, Róbert; Mikula, Karol

2016-04-01

The fixed gravimetric boundary value problem (FGBVP) represents an exterior oblique derivative problem for the Laplace equation. A direct formulation of the boundary element method (BEM) for the Laplace equation leads to a boundary integral equation (BIE) where a harmonic function is represented as a superposition of the single-layer and double-layer potential. Such a potential representation is applied to obtain a numerical solution of FGBVP. The oblique derivative problem is treated by a decomposition of the gradient of the unknown disturbing potential into its normal and tangential components. Our numerical scheme uses the collocation with linear basis functions. It involves a triangulated discretization of the Earth's surface as our computational domain considering its complicated topography. To achieve high-resolution numerical solutions, parallel implementations using the MPI subroutines as well as an iterative elimination of far zones' contributions are performed. Numerical experiments present a reconstruction of a harmonic function above the Earth's topography given by the spherical harmonic approach, namely by the EGM2008 geopotential model up to degree 2160. The SRTM30 global topography model is used to approximate the Earth's surface by the triangulated discretization. The obtained BEM solution with the resolution 0.05 deg (12,960,002 nodes) is compared with EGM2008. The standard deviation of residuals 5.6 cm indicates a good agreement. The largest residuals are obviously in high mountainous regions. They are negative reaching up to -0.7 m in Himalayas and about -0.3 m in Andes and Rocky Mountains. A local refinement in the area of Slovakia confirms an improvement of the numerical solution in this mountainous region despite of the fact that the Earth's topography is here considered in more details.

Fully inkjet-printed microfluidics: a solution to low-cost rapid three-dimensional microfluidics fabrication with numerous electrical and sensing applications

PubMed Central

Su, Wenjing; Cook, Benjamin S.; Fang, Yunnan; Tentzeris, Manos M.

2016-01-01

As the needs for low-cost rapidly-produced microfluidics are growing with the trend of Lab-on-a-Chip and distributed healthcare, the fully inkjet-printing of microfluidics can be a solution to it with numerous potential electrical and sensing applications. Inkjet-printing is an additive manufacturing technique featuring no material waste and a low equipment cost. Moreover, similar to other additive manufacturing techniques, inkjet-printing is easy to learn and has a high fabrication speed, while it offers generally a great planar resolution down to below 20 µm and enables flexible designs due to its inherent thin film deposition capabilities. Due to the thin film feature, the printed objects also usually obtain a high vertical resolution (such as 4.6 µm). This paper introduces a low-cost rapid three-dimensional fabrication process of microfluidics, that relies entirely on an inkjet-printer based single platform and can be implemented directly on top of virtually any substrates. PMID:27713545

Numerical Simulation of Regional Circulation in the Monterey Bay Region

NASA Technical Reports Server (NTRS)

Tseng, Y. H.; Dietrich, D. E.; Ferziger, J. H.

2003-01-01

The objective of this study is to produce a high-resolution numerical model of Mon- terey Bay area in which the dynamics are determined by the complex geometry of the coastline, steep bathymetry, and the in uence of the water masses that constitute the CCS. Our goal is to simulate the regional-scale ocean response with realistic dynamics (annual cycle), forcing, and domain. In particular, we focus on non-hydrostatic e ects (by comparing the results of hydrostatic and non-hydrostatic models) and the role of complex geometry, i.e. the bay and submarine canyon, on the nearshore circulation. To the best of our knowledge, the current study is the rst to simulate the regional circulation in the vicinity of Monterey Bay using a non-hydrostatic model. Section 2 introduces the high resolution Monterey Bay area regional model (MBARM). Section 3 provides the results and veri cation with mooring and satellite data. Section 4 compares the results of hydrostatic and non-hydrostatic models.

Fully inkjet-printed microfluidics: a solution to low-cost rapid three-dimensional microfluidics fabrication with numerous electrical and sensing applications

NASA Astrophysics Data System (ADS)

Su, Wenjing; Cook, Benjamin S.; Fang, Yunnan; Tentzeris, Manos M.

2016-10-01

As the needs for low-cost rapidly-produced microfluidics are growing with the trend of Lab-on-a-Chip and distributed healthcare, the fully inkjet-printing of microfluidics can be a solution to it with numerous potential electrical and sensing applications. Inkjet-printing is an additive manufacturing technique featuring no material waste and a low equipment cost. Moreover, similar to other additive manufacturing techniques, inkjet-printing is easy to learn and has a high fabrication speed, while it offers generally a great planar resolution down to below 20 µm and enables flexible designs due to its inherent thin film deposition capabilities. Due to the thin film feature, the printed objects also usually obtain a high vertical resolution (such as 4.6 µm). This paper introduces a low-cost rapid three-dimensional fabrication process of microfluidics, that relies entirely on an inkjet-printer based single platform and can be implemented directly on top of virtually any substrates.

High-numerical-aperture cryogenic light microscopy for increased precision of superresolution reconstructions

PubMed Central

Nahmani, Marc; Lanahan, Conor; DeRosier, David; Turrigiano, Gina G.

2017-01-01

Superresolution microscopy has fundamentally altered our ability to resolve subcellular proteins, but improving on these techniques to study dense structures composed of single-molecule-sized elements has been a challenge. One possible approach to enhance superresolution precision is to use cryogenic fluorescent imaging, reported to reduce fluorescent protein bleaching rates, thereby increasing the precision of superresolution imaging. Here, we describe an approach to cryogenic photoactivated localization microscopy (cPALM) that permits the use of a room-temperature high-numerical-aperture objective lens to image frozen samples in their native state. We find that cPALM increases photon yields and show that this approach can be used to enhance the effective resolution of two photoactivatable/switchable fluorophore-labeled structures in the same frozen sample. This higher resolution, two-color extension of the cPALM technique will expand the accessibility of this approach to a range of laboratories interested in more precise reconstructions of complex subcellular targets. PMID:28348224

A single-phase elastic hyperbolic metamaterial with anisotropic mass density.

PubMed

Zhu, R; Chen, Y Y; Wang, Y S; Hu, G K; Huang, G L

2016-06-01

Wave propagation can be manipulated at a deep subwavelength scale through the locally resonant metamaterial that possesses unusual effective material properties. Hyperlens due to metamaterial's anomalous anisotropy can lead to superior-resolution imaging. In this paper, a single-phase elastic metamaterial with strongly anisotropic effective mass density has been designed. The proposed metamaterial utilizes the independently adjustable locally resonant motions of the subwavelength-scale microstructures along the two principal directions. High anisotropy in the effective mass densities obtained by the numerical-based effective medium theory can be found and even have opposite signs. For practical applications, shunted piezoelectric elements are introduced into the microstructure to tailor the effective mass density in a broad frequency range. Finally, to validate the design, an elastic hyperlens made of the single-phase hyperbolic metamaterial is proposed with subwavelength longitudinal wave imaging illustrated numerically. The proposed single-phase hyperbolic metamaterial has many promising applications for high resolution damage imaging in nondestructive evaluation and structural health monitoring.

Design of a handheld optical coherence microscopy endoscope

NASA Astrophysics Data System (ADS)

Korde, Vrushali R.; Liebmann, Erica; Barton, Jennifer K.

2011-06-01

Optical coherence microscopy (OCM) combines coherence gating, high numerical aperture optics, and a fiber-core pinhole to provide high axial and lateral resolution with relatively large depth of imaging. We present a handheld rigid OCM endoscope designed for small animal surgical imaging, with a 6-mm diam tip, 1-mm scan width, and 1-mm imaging depth. X-Y scanning is performed distally with mirrors mounted to micro galvonometer scanners incorporated into the endoscope handle. The endoscope optical design consists of scanning doublets, an afocal Hopkins relay lens system, a 0.4 numerical aperture water immersion objective, and a cover glass. This endoscope can resolve laterally a 1.4-μm line pair feature and has an axial resolution (full width half maximum) of 5.4 μm. Images taken with this endoscope of fresh ex-vivo mouse ovaries show structural features, such as corpus luteum, primary follicles, growing follicles, and fallopian tubes. This rigid handheld OCM endoscope can be useful for a variety of minimally invasive and surgical imaging applications.

A class of high resolution explicit and implicit shock-capturing methods

NASA Technical Reports Server (NTRS)

Yee, H. C.

1989-01-01

An attempt is made to give a unified and generalized formulation of a class of high resolution, explicit and implicit shock capturing methods, and to illustrate their versatility in various steady and unsteady complex shock wave computations. Included is a systematic review of the basic design principle of the various related numerical methods. Special emphasis is on the construction of the basis nonlinear, spatially second and third order schemes for nonlinear scalar hyperbolic conservation laws and the methods of extending these nonlinear scalar schemes to nonlinear systems via the approximate Riemann solvers and the flux vector splitting approaches. Generalization of these methods to efficiently include equilibrium real gases and large systems of nonequilibrium flows are discussed. Some issues concerning the applicability of these methods that were designed for homogeneous hyperbolic conservation laws to problems containing stiff source terms and shock waves are also included. The performance of some of these schemes is illustrated by numerical examples for 1-, 2- and 3-dimensional gas dynamics problems.

Macro-actor execution on multilevel data-driven architectures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gaudiot, J.L.; Najjar, W.

1988-12-31

The data-flow model of computation brings to multiprocessors high programmability at the expense of increased overhead. Applying the model at a higher level leads to better performance but also introduces loss of parallelism. We demonstrate here syntax directed program decomposition methods for the creation of large macro-actors in numerical algorithms. In order to alleviate some of the problems introduced by the lower resolution interpretation, we describe a multi-level of resolution and analyze the requirements for its actual hardware and software integration.

Developing Local Scale, High Resolution, Data to Interface with Numerical Storm Models

NASA Astrophysics Data System (ADS)

Witkop, R.; Becker, A.; Stempel, P.

2017-12-01

High resolution, physical storm models that can rapidly predict storm surge, inundation, rainfall, wind velocity and wave height at the intra-facility scale for any storm affecting Rhode Island have been developed by Researchers at the University of Rhode Island's (URI's) Graduate School of Oceanography (GSO) (Ginis et al., 2017). At the same time, URI's Marine Affairs Department has developed methods that inhere individual geographic points into GSO's models and enable the models to accurately incorporate local scale, high resolution data (Stempel et al., 2017). This combination allows URI's storm models to predict any storm's impacts on individual Rhode Island facilities in near real time. The research presented here determines how a coastal Rhode Island town's critical facility managers (FMs) perceive their assets as being vulnerable to quantifiable hurricane-related forces at the individual facility scale and explores methods to elicit this information from FMs in a format usable for incorporation into URI's storm models.

High-speed X-ray microscopy by use of high-resolution zone plates and synchrotron radiation.

PubMed

Hou, Qiyue; Wang, Zhili; Gao, Kun; Pan, Zhiyun; Wang, Dajiang; Ge, Xin; Zhang, Kai; Hong, Youli; Zhu, Peiping; Wu, Ziyu

2012-09-01

X-ray microscopy based on synchrotron radiation has become a fundamental tool in biology and life sciences to visualize the morphology of a specimen. These studies have particular requirements in terms of radiation damage and the image exposure time, which directly determines the total acquisition speed. To monitor and improve these key parameters, we present a novel X-ray microscopy method using a high-resolution zone plate as the objective and the matching condenser. Numerical simulations based on the scalar wave field theory validate the feasibility of the method and also indicate the performance of X-ray microscopy is optimized most with sub-10-nm-resolution zone plates. The proposed method is compatible with conventional X-ray microscopy techniques, such as computed tomography, and will find wide applications in time-resolved and/or dose-sensitive studies such as living cell imaging.

Development of high resolution simulations of the atmospheric environment using the MASS model

NASA Technical Reports Server (NTRS)

Kaplan, Michael L.; Zack, John W.; Karyampudi, V. Mohan

1989-01-01

Numerical simulations were performed with a very high resolution (7.25 km) version of the MASS model (Version 4.0) in an effort to diagnose the vertical wind shear and static stability structure during the Shuttle Challenger disaster which occurred on 28 January 1986. These meso-beta scale simulations reveal that the strongest vertical wind shears were concentrated in the 200 to 150 mb layer at 1630 GMT, i.e., at about the time of the disaster. These simulated vertical shears were the result of two primary dynamical processes. The juxtaposition of both of these processes produced a shallow (30 mb deep) region of strong vertical wind shear, and hence, low Richardson number values during the launch time period. Comparisons with the Cape Canaveral (XMR) rawinsonde indicates that the high resolution MASS 4.0 simulation more closely emulated nature than did previous simulations of the same event with the GMASS model.

Investigating the influence of chromatic aberration and optical illumination bandwidth on fundus imaging in rats

NASA Astrophysics Data System (ADS)

Li, Hao; Liu, Wenzhong; Zhang, Hao F.

2015-10-01

Rodent models are indispensable in studying various retinal diseases. Noninvasive, high-resolution retinal imaging of rodent models is highly desired for longitudinally investigating the pathogenesis and therapeutic strategies. However, due to severe aberrations, the retinal image quality in rodents can be much worse than that in humans. We numerically and experimentally investigated the influence of chromatic aberration and optical illumination bandwidth on retinal imaging. We confirmed that the rat retinal image quality decreased with increasing illumination bandwidth. We achieved the retinal image resolution of 10 μm using a 19 nm illumination bandwidth centered at 580 nm in a home-built fundus camera. Furthermore, we observed higher chromatic aberration in albino rat eyes than in pigmented rat eyes. This study provides a design guide for high-resolution fundus camera for rodents. Our method is also beneficial to dispersion compensation in multiwavelength retinal imaging applications.

Toroidal sensor arrays for real-time photoacoustic imaging

NASA Astrophysics Data System (ADS)

Bychkov, Anton S.; Cherepetskaya, Elena B.; Karabutov, Alexander A.; Makarov, Vladimir A.

2017-07-01

This article addresses theoretical and numerical investigation of image formation in photoacoustic (PA) imaging with complex-shaped concave sensor arrays. The spatial resolution and the size of sensitivity region of PA and laser ultrasonic (LU) imaging systems are assessed using sensitivity maps and spatial resolution maps in the image plane. This paper also discusses the relationship between the size of high-sensitivity regions and the spatial resolution of real-time imaging systems utilizing toroidal arrays. It is shown that the use of arrays with toroidal geometry significantly improves the diagnostic capabilities of PA and LU imaging to investigate biological objects, rocks, and composite materials.

A CFD study of gas-solid jet in a CFB riser flow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Tingwen; Guenther, Chris

2012-03-01

Three-dimensional high-resolution numerical simulations of a gas–solid jet in a high-density riser flow were conducted. The impact of gas–solid injection on the riser flow hydrodynamics was investigated with respect to voidage, tracer mass fractions, and solids velocity distribution. The behaviors of a gas–solid jet in the riser crossflow were studied through the unsteady numerical simulations. Substantial separation of the jetting gas and solids in the riser crossflow was observed. Mixing of the injected gas and solids with the riser flow was investigated and backmixing of gas and solids was evaluated. In the current numerical study, both the overall hydrodynamics ofmore » riser flow and the characteristics of gas–solid jet were reasonably predicted compared with the experimental measurements made at NETL.« less

A characteristics-based method for solving the transport equation and its application to the process of mantle differentiation and continental root growth

NASA Astrophysics Data System (ADS)

de Smet, Jeroen H.; van den Berg, Arie P.; Vlaar, Nico J.; Yuen, David A.

2000-03-01

Purely advective transport of composition is of major importance in the Geosciences, and efficient and accurate solution methods are needed. A characteristics-based method is used to solve the transport equation. We employ a new hybrid interpolation scheme, which allows for the tuning of stability and accuracy through a threshold parameter ɛth. Stability is established by bilinear interpolations, and bicubic splines are used to maintain accuracy. With this scheme, numerical instabilities can be suppressed by allowing numerical diffusion to work in time and locally in space. The scheme can be applied efficiently for preliminary modelling purposes. This can be followed by detailed high-resolution experiments. First, the principal effects of this hybrid interpolation method are illustrated and some tests are presented for numerical solutions of the transport equation. Second, we illustrate that this approach works successfully for a previously developed continental evolution model for the convecting upper mantle. In this model the transport equation contains a source term, which describes the melt production in pressure-released partial melting. In this model, a characteristic phenomenon of small-scale melting diapirs is observed (De Smet et al.1998; De Smet et al. 1999). High-resolution experiments with grid cells down to 700m horizontally and 515m vertically result in highly detailed observations of the diapiric melting phenomenon.

Wavelet data compression for archiving high-resolution icosahedral model data

NASA Astrophysics Data System (ADS)

Wang, N.; Bao, J.; Lee, J.

2011-12-01

With the increase of the resolution of global circulation models, it becomes ever more important to develop highly effective solutions to archive the huge datasets produced by those models. While lossless data compression guarantees the accuracy of the restored data, it can only achieve limited reduction of data size. Wavelet transform based data compression offers significant potentials in data size reduction, and it has been shown very effective in transmitting data for remote visualizations. However, for data archive purposes, a detailed study has to be conducted to evaluate its impact to the datasets that will be used in further numerical computations. In this study, we carried out two sets of experiments for both summer and winter seasons. An icosahedral grid weather model and a highly efficient wavelet data compression software were used for this study. Initial conditions were compressed and input to the model to run to 10 days. The forecast results were then compared to those forecast results from the model run with the original uncompressed initial conditions. Several visual comparisons, as well as the statistics of numerical comparisons are presented. These results indicate that with specified minimum accuracy losses, wavelet data compression achieves significant data size reduction, and at the same time, it maintains minimum numerical impacts to the datasets. In addition, some issues are discussed to increase the archive efficiency while retaining a complete set of meta data for each archived file.

Modeling Stokes flow in real pore geometries derived by high resolution micro CT imaging

NASA Astrophysics Data System (ADS)

Halisch, M.; Müller, C.

2012-04-01

Meanwhile, numerical modeling of rock properties forms an important part of modern petrophysics. Substantially, equivalent rock models are used to describe and assess specific properties and phenomena, like fluid transport or complex electrical properties. In recent years, non-destructive computed X-ray tomography got more and more important - not only to take a quick and three dimensional look into rock samples but also to get access to in-situ sample information for highly accurate modeling purposes. Due to - by now - very high resolution of the 3D CT data sets (micron- to submicron range) also very small structures and sample features - e.g. micro porosity - can be visualized and used for numerical models of very high accuracy. Special demands even arise before numerical modeling can take place. Inappropriate filter applications (e.g. improper type of filter, wrong kernel, etc.) may lead to a significant corruption of spatial sample structure and / or even sample or void space volume. Because of these difficulties, especially small scale mineral- and pore space textures are very often lost and valuable in-situ information is erased. Segmentation of important sample features - porosity as well as rock matrix - based upon grayscale values strongly depends upon the scan quality and upon the experience of the application engineer, respectively. If the threshold for matrix-porosity separation is set too low, porosity can be quickly (and even more, due to restrictions of scanning resolution) underestimated. Contrary to this, a too high threshold over-determines porosity and small void space features as well as interfaces are changed and falsified. Image based phase separation in close combination with "conventional" analytics, as scanning electron microscopy or thin sectioning, greatly increase the reliability of this preliminary work. For segmentation and quantification purposes, a special CT imaging and processing software (Avizo Fire) has been used. By using this tool, 3D rock data can be assessed and interpreted by petrophysical means. Furthermore, pore structures can be directly segmented and hence could be used for so called image based modeling approach. The special XLabHydro module grants a finite volume solver for the direct assessment of Stokes flow (incompressible fluid, constant dynamic viscosity, stationary conditions and laminar flow) in real pore geometries. Nevertheless, also pore network extraction and numerical modeling with standard FE or lattice Boltzmann solvers is possible. By using the achieved voxel resolution as smallest node distance, fluid flow properties can be analyzed even in very small sample structures and hence with very high accuracy, especially with interaction to bigger parts of the pore network. The so derived results in combination with a direct 3D visualization within the structures offer great new insights and understanding in range of meso- and microscopic pore space phenomena.

Optimization of an on-board imaging system for extremely rapid radiation therapy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cherry Kemmerling, Erica M.; Wu, Meng, E-mail: mengwu@stanford.edu; Yang, He

2015-11-15

Purpose: Next-generation extremely rapid radiation therapy systems could mitigate the need for motion management, improve patient comfort during the treatment, and increase patient throughput for cost effectiveness. Such systems require an on-board imaging system that is competitively priced, fast, and of sufficiently high quality to allow good registration between the image taken on the day of treatment and the image taken the day of treatment planning. In this study, three different detectors for a custom on-board CT system were investigated to select the best design for integration with an extremely rapid radiation therapy system. Methods: Three different CT detectors aremore » proposed: low-resolution (all 4 × 4 mm pixels), medium-resolution (a combination of 4 × 4 mm pixels and 2 × 2 mm pixels), and high-resolution (all 1 × 1 mm pixels). An in-house program was used to generate projection images of a numerical anthropomorphic phantom and to reconstruct the projections into CT datasets, henceforth called “realistic” images. Scatter was calculated using a separate Monte Carlo simulation, and the model included an antiscatter grid and bowtie filter. Diagnostic-quality images of the phantom were generated to represent the patient scan at the time of treatment planning. Commercial deformable registration software was used to register the diagnostic-quality scan to images produced by the various on-board detector configurations. The deformation fields were compared against a “gold standard” deformation field generated by registering initial and deformed images of the numerical phantoms that were used to make the diagnostic and treatment-day images. Registrations of on-board imaging system data were judged by the amount their deformation fields differed from the corresponding gold standard deformation fields—the smaller the difference, the better the system. To evaluate the registrations, the pointwise distance between gold standard and realistic registration deformation fields was computed. Results: By most global metrics (e.g., mean, median, and maximum pointwise distance), the high-resolution detector had the best performance but the medium-resolution detector was comparable. For all medium- and high-resolution detector registrations, mean error between the realistic and gold standard deformation fields was less than 4 mm. By pointwise metrics (e.g., tracking a small lesion), the high- and medium-resolution detectors performed similarly. For these detectors, the smallest error between the realistic and gold standard registrations was 0.6 mm and the largest error was 3.6 mm. Conclusions: The medium-resolution CT detector was selected as the best for an extremely rapid radiation therapy system. In essentially all test cases, data from this detector produced a significantly better registration than data from the low-resolution detector and a comparable registration to data from the high-resolution detector. The medium-resolution detector provides an appropriate compromise between registration accuracy and system cost.« less

Application of CHESS single-bounce capillaries at synchrotron beamlines

NASA Astrophysics Data System (ADS)

Huang, R.; Szebenyi, T.; Pfeifer, M.; Woll, A.; Smilgies, D.-M.; Finkelstein, K.; Dale, D.; Wang, Y.; Vila-Comamala, J.; Gillilan, R.; Cook, M.; Bilderback, D. H.

2014-03-01

Single-bounce capillaries are achromatic X-ray focusing optics that can provide efficient and high demagnification focusing with large numerical apertures. Capillary fabrication at CHESS can be customized according to specific application requirements. Exemplary applications are reviewed in this paper, as well as recent progress on condensers for high-resolution transmission X-ray microscopy and small focal size capillaries.

Study of compressible turbulent flows in supersonic environment by large-eddy simulation

NASA Astrophysics Data System (ADS)

Genin, Franklin

The numerical resolution of turbulent flows in high-speed environment is of fundamental importance but remains a very challenging problem. First, the capture of strong discontinuities, typical of high-speed flows, requires the use of shock-capturing schemes, which are not adapted to the resolution of turbulent structures due to their intrinsic dissipation. On the other hand, low-dissipation schemes are unable to resolve shock fronts and other sharp gradients without creating high amplitude numerical oscillations. Second, the nature of turbulence in high-speed flows differs from its incompressible behavior, and, in the context of Large-Eddy Simulation, the subgrid closure must be adapted to the modeling of compressibility effects and shock waves on turbulent flows. The developments described in this thesis are two-fold. First, a state of the art closure approach for LES is extended to model subgrid turbulence in compressible flows. The energy transfers due to compressible turbulence and the diffusion of turbulent kinetic energy by pressure fluctuations are assessed and integrated in the Localized Dynamic ksgs model. Second, a hybrid numerical scheme is developed for the resolution of the LES equations and of the model transport equation, which combines a central scheme for turbulent resolutions to a shock-capturing method. A smoothness parameter is defined and used to switch from the base smooth solver to the upwind scheme in regions of discontinuities. It is shown that the developed hybrid methodology permits a capture of shock/turbulence interactions in direct simulations that agrees well with other reference simulations, and that the LES methodology effectively reproduces the turbulence evolution and physical phenomena involved in the interaction. This numerical approach is then employed to study a problem of practical importance in high-speed mixing. The interaction of two shock waves with a high-speed turbulent shear layer as a mixing augmentation technique is considered. It is shown that the levels of turbulence are increased through the interaction, and that the mixing is significantly improved in this flow configuration. However, the region of increased mixing is found to be localized to a region close to the impact of the shocks, and that the statistical levels of turbulence relax to their undisturbed levels some short distance downstream of the interaction. The present developments are finally applied to a practical configuration relevant to scramjet injection. The normal injection of a sonic jet into a supersonic crossflow is considered numerically, and compared to the results of an experimental study. A fair agreement in the statistics of mean and fluctuating velocity fields is obtained. Furthermore, some of the instantaneous flow structures observed in experimental visualizations are identified in the present simulation. The dynamics of the interaction for the reference case, based on the experimental study, as well as for a case of higher freestream Mach number and a case of higher momentum ratio, are examined. The classical instantaneous vortical structures are identified, and their generation mechanisms, specific to supersonic flow, are highlighted. Furthermore, two vortical structures, recently revealed in low-speed jets in crossflow but never documented for high-speed flows, are identified during the flow evolution.

Bathymetry in the Classroom

ERIC Educational Resources Information Center

Michael, Kurt Y.

2013-01-01

The "Titanic" caught the attention and imagination of the public when, in 1985, the sunken ship was discovered 370 miles off the coast of Newfoundland (PBS, 2012). Since that time, scientists have conducted numerous expeditions using high-resolution SONAR working in tandem with remote-operated vehicles (ROV) to collect information used…

Bridging the scales in atmospheric composition simulations using a nudging technique

NASA Astrophysics Data System (ADS)

D'Isidoro, Massimo; Maurizi, Alberto; Russo, Felicita; Tampieri, Francesco

2010-05-01

Studying the interaction between climate and anthropogenic activities, specifically those concentrated in megacities/hot spots, requires the description of processes in a very wide range of scales from local, where anthropogenic emissions are concentrated to global where we are interested to study the impact of these sources. The description of all the processes at all scales within the same numerical implementation is not feasible because of limited computer resources. Therefore, different phenomena are studied by means of different numerical models that can cover different range of scales. The exchange of information from small to large scale is highly non-trivial though of high interest. In fact uncertainties in large scale simulations are expected to receive large contribution from the most polluted areas where the highly inhomogeneous distribution of sources connected to the intrinsic non-linearity of the processes involved can generate non negligible departures between coarse and fine scale simulations. In this work a new method is proposed and investigated in a case study (August 2009) using the BOLCHEM model. Monthly simulations at coarse (0.5° European domain, run A) and fine (0.1° Central Mediterranean domain, run B) horizontal resolution are performed using the coarse resolution as boundary condition for the fine one. Then another coarse resolution run (run C) is performed, in which the high resolution fields remapped on to the coarse grid are used to nudge the concentrations on the Po Valley area. The nudging is applied to all gas and aerosol species of BOLCHEM. Averaged concentrations and variances over Po Valley and other selected areas for O3 and PM are computed. It is observed that although the variance of run B is markedly larger than that of run A, the variance of run C is smaller because the remapping procedure removes large portion of variance from run B fields. Mean concentrations show some differences depending on species: in general mean values of run C lie between run A and run B. A propagation of the signal outside the nudging region is observed, and is evaluated in terms of differences between coarse resolution (with and without nudging) and fine resolution simulations.

Vibrationally resonant sum-frequency generation microscopy with a solid immersion lens

PubMed Central

Lee, Eun Seong; Lee, Sang-Won; Hsu, Julie; Potma, Eric O.

2014-01-01

We use a hemispheric sapphire lens in combination with an off-axis parabolic mirror to demonstrate high-resolution vibrationally resonant sum-frequency generation (VR-SFG) microscopy in the mid-infrared range. With the sapphire lens as an immersed solid medium, the numerical aperture (NA) of the parabolic mirror objective is enhanced by a factor of 1.72, from 0.42 to 0.72, close to the theoretical value of 1.76 ( = nsapphire). The measured lateral resolution is as high as 0.64 μm. We show the practical utility of the sapphire immersion lens by imaging collagen-rich tissues with and without the solid immersion lens. PMID:25071953

Massive stars in the Sagittarius Dwarf Irregular Galaxy

NASA Astrophysics Data System (ADS)

Garcia, Miriam

2018-02-01

Low metallicity massive stars hold the key to interpret numerous processes in the past Universe including re-ionization, starburst galaxies, high-redshift supernovae, and γ-ray bursts. The Sagittarius Dwarf Irregular Galaxy [SagDIG, 12+log(O/H) = 7.37] represents an important landmark in the quest for analogues accessible with 10-m class telescopes. This Letter presents low-resolution spectroscopy executed with the Gran Telescopio Canarias that confirms that SagDIG hosts massive stars. The observations unveiled three OBA-type stars and one red supergiant candidate. Pending confirmation from high-resolution follow-up studies, these could be the most metal-poor massive stars of the Local Group.

Testing high resolution numerical models for analysis of contaminant storage and release from low permeability zones

NASA Astrophysics Data System (ADS)

Chapman, Steven W.; Parker, Beth L.; Sale, Tom C.; Doner, Lee Ann

2012-08-01

It is now widely recognized that contaminant release from low permeability zones can sustain plumes long after primary sources are depleted, particularly for chlorinated solvents where regulatory limits are orders of magnitude below source concentrations. This has led to efforts to appropriately characterize sites and apply models for prediction incorporating these effects. A primary challenge is that diffusion processes are controlled by small-scale concentration gradients and capturing mass distribution in low permeability zones requires much higher resolution than commonly practiced. This paper explores validity of using numerical models (HydroGeoSphere, FEFLOW, MODFLOW/MT3DMS) in high resolution mode to simulate scenarios involving diffusion into and out of low permeability zones: 1) a laboratory tank study involving a continuous sand body with suspended clay layers which was 'loaded' with bromide and fluorescein (for visualization) tracers followed by clean water flushing, and 2) the two-layer analytical solution of Sale et al. (2008) involving a relatively simple scenario with an aquifer and underlying low permeability layer. All three models are shown to provide close agreement when adequate spatial and temporal discretization are applied to represent problem geometry, resolve flow fields and capture advective transport in the sands and diffusive transfer with low permeability layers and minimize numerical dispersion. The challenge for application at field sites then becomes appropriate site characterization to inform the models, capturing the style of the low permeability zone geometry and incorporating reasonable hydrogeologic parameters and estimates of source history, for scenario testing and more accurate prediction of plume response, leading to better site decision making.

Adaptive optics with pupil tracking for high resolution retinal imaging

PubMed Central

Sahin, Betul; Lamory, Barbara; Levecq, Xavier; Harms, Fabrice; Dainty, Chris

2012-01-01

Adaptive optics, when integrated into retinal imaging systems, compensates for rapidly changing ocular aberrations in real time and results in improved high resolution images that reveal the photoreceptor mosaic. Imaging the retina at high resolution has numerous potential medical applications, and yet for the development of commercial products that can be used in the clinic, the complexity and high cost of the present research systems have to be addressed. We present a new method to control the deformable mirror in real time based on pupil tracking measurements which uses the default camera for the alignment of the eye in the retinal imaging system and requires no extra cost or hardware. We also present the first experiments done with a compact adaptive optics flood illumination fundus camera where it was possible to compensate for the higher order aberrations of a moving model eye and in vivo in real time based on pupil tracking measurements, without the real time contribution of a wavefront sensor. As an outcome of this research, we showed that pupil tracking can be effectively used as a low cost and practical adaptive optics tool for high resolution retinal imaging because eye movements constitute an important part of the ocular wavefront dynamics. PMID:22312577

Adaptive optics with pupil tracking for high resolution retinal imaging.

PubMed

Sahin, Betul; Lamory, Barbara; Levecq, Xavier; Harms, Fabrice; Dainty, Chris

2012-02-01

Adaptive optics, when integrated into retinal imaging systems, compensates for rapidly changing ocular aberrations in real time and results in improved high resolution images that reveal the photoreceptor mosaic. Imaging the retina at high resolution has numerous potential medical applications, and yet for the development of commercial products that can be used in the clinic, the complexity and high cost of the present research systems have to be addressed. We present a new method to control the deformable mirror in real time based on pupil tracking measurements which uses the default camera for the alignment of the eye in the retinal imaging system and requires no extra cost or hardware. We also present the first experiments done with a compact adaptive optics flood illumination fundus camera where it was possible to compensate for the higher order aberrations of a moving model eye and in vivo in real time based on pupil tracking measurements, without the real time contribution of a wavefront sensor. As an outcome of this research, we showed that pupil tracking can be effectively used as a low cost and practical adaptive optics tool for high resolution retinal imaging because eye movements constitute an important part of the ocular wavefront dynamics.

Improving lateral resolution and image quality of optical coherence tomography by the multi-frame superresolution technique for 3D tissue imaging

PubMed Central

Shen, Kai; Lu, Hui; Baig, Sarfaraz; Wang, Michael R.

2017-01-01

The multi-frame superresolution technique is introduced to significantly improve the lateral resolution and image quality of spectral domain optical coherence tomography (SD-OCT). Using several sets of low resolution C-scan 3D images with lateral sub-spot-spacing shifts on different sets, the multi-frame superresolution processing of these sets at each depth layer reconstructs a higher resolution and quality lateral image. Layer by layer processing yields an overall high lateral resolution and quality 3D image. In theory, the superresolution processing including deconvolution can solve the diffraction limit, lateral scan density and background noise problems together. In experiment, the improved lateral resolution by ~3 times reaching 7.81 µm and 2.19 µm using sample arm optics of 0.015 and 0.05 numerical aperture respectively as well as doubling the image quality has been confirmed by imaging a known resolution test target. Improved lateral resolution on in vitro skin C-scan images has been demonstrated. For in vivo 3D SD-OCT imaging of human skin, fingerprint and retina layer, we used the multi-modal volume registration method to effectively estimate the lateral image shifts among different C-scans due to random minor unintended live body motion. Further processing of these images generated high lateral resolution 3D images as well as high quality B-scan images of these in vivo tissues. PMID:29188089

Comment on high resolution simulations of cosmic strings. 1: Network evoloution

NASA Technical Reports Server (NTRS)

Turok, Neil; Albrecht, Andreas

1990-01-01

Comments are made on recent claims (Albrecht and Turok, 1989) regarding simulations of cosmic string evolution. Specially, it was claimed that results were dominated by a numerical artifact which rounds out kinks on a scale of the order of the correlation length on the network. This claim was based on an approximate analysis of an interpolation equation which is solved herein. The typical rounding scale is actually less than one fifth of the correlation length, and comparable with other numerical cutoffs. Results confirm previous estimates of numerical uncertainties, and show that the approximations poorly represent the real solutions to the interpolation equation.

The Spatial Resolution in the Computer Modelling of Atmospheric Flow over a Double-Hill Forested Region

NASA Astrophysics Data System (ADS)

Palma, J. L.; Rodrigues, C. V.; Lopes, A. S.; Carneiro, A. M. C.; Coelho, R. P. C.; Gomes, V. C.

2017-12-01

With the ever increasing accuracy required from numerical weather forecasts, there is pressure to increase the resolution and fidelity employed in computational micro-scale flow models. However, numerical studies of complex terrain flows are fundamentally bound by the digital representation of the terrain and land cover. This work assess the impact of the surface description on micro-scale simulation results at a highly complex site in Perdigão, Portugal, characterized by a twin parallel ridge topography, densely forested areas and an operating wind turbine. Although Coriolis and stratification effects cannot be ignored, the study is done under neutrally stratified atmosphere and static inflow conditions. The understanding gained here will later carry over to WRF-coupled simulations, where those conditions do not apply and the flow physics is more accurately modelled. With access to very fine digital mappings (<1m horizontal resolution) of both topography and land cover (roughness and canopy cover, both obtained through aerial LIDAR scanning of the surface) the impact of each element of the surface description on simulation results can be individualized, in order to estimate the resolution required to satisfactorily resolve them. Starting from the bare topographic description, in its coursest form, these include: a) the surface roughness mapping, b) the operating wind turbine, c) the canopy cover, as either body forces or added surface roughness (akin to meso-scale modelling), d) high resolution topography and surface cover mapping. Each of these individually will have an impact near the surface, including the rotor swept area of modern wind turbines. Combined they will considerably change flow up to boundary layer heights. Sensitivity to these elements cannot be generalized and should be assessed case-by-case. This type of in-depth study, unfeasible using WRF-coupled simulations, should provide considerable insight when spatially allocating mesh resolution for accurate resolution of complex flows.

Compartmentalized Low-Rank Recovery for High-Resolution Lipid Unsuppressed MRSI

PubMed Central

Bhattacharya, Ipshita; Jacob, Mathews

2017-01-01

Purpose To introduce a novel algorithm for the recovery of high-resolution magnetic resonance spectroscopic imaging (MRSI) data with minimal lipid leakage artifacts, from dual-density spiral acquisition. Methods The reconstruction of MRSI data from dual-density spiral data is formulated as a compartmental low-rank recovery problem. The MRSI dataset is modeled as the sum of metabolite and lipid signals, each of which is support limited to the brain and extracranial regions, respectively, in addition to being orthogonal to each other. The reconstruction problem is formulated as an optimization problem, which is solved using iterative reweighted nuclear norm minimization. Results The comparisons of the scheme against dual-resolution reconstruction algorithm on numerical phantom and in vivo datasets demonstrate the ability of the scheme to provide higher spatial resolution and lower lipid leakage artifacts. The experiments demonstrate the ability of the scheme to recover the metabolite maps, from lipid unsuppressed datasets with echo time (TE)=55 ms. Conclusion The proposed reconstruction method and data acquisition strategy provide an efficient way to achieve high-resolution metabolite maps without lipid suppression. This algorithm would be beneficial for fast metabolic mapping and extension to multislice acquisitions. PMID:27851875

Visualizing the root-PDL-bone interface using high-resolution microtomography

NASA Astrophysics Data System (ADS)

Dalstra, Michel; Cattaneo, Paolo M.; Herzen, Julia; Beckmann, Felix

2008-08-01

The root/periodontal ligament/bone (RPB) interface is important for a correct understanding of the load transfer mechanism of masticatory forces and orthodontic loads. It is the aim of this study to assess the three-dimensional structure of the RPB interface using high-resolution microtomography. A human posterior jaw segment, obtained at autopsy from a 22-year old male donor was first scanned using a tomograph at the HASYLAB/DESY synchrotron facility (Hamburg, Germany) at 31μm resolution. Afterwards the first molar and its surrounding bone were removed with a 10mm hollow core drill. From this cylindrical sample smaller samples were drilled out in the buccolingual direction with a 1.5mm hollow core drill. These samples were scanned at 4μm resolution. The scans of the entire segment showed alveolar bone with a thin lamina dura, supported by an intricate trabecular network. Although featuring numerous openings between the PDL and the bone marrow on the other side to allow blood vessels to transverse, the lamina dura seems smooth at this resolution. First at high resolution, however, it becomes evident that it is irregular with bony spiculae and pitted surfaces. Therefore the stresses in the bone during physiological or orthodontic loading are much higher than expected from a smooth continuous alveolus.

Waterspout Forecasting Method Over the Eastern Adriatic Using a High-Resolution Numerical Weather Model

NASA Astrophysics Data System (ADS)

Renko, Tanja; Ivušić, Sarah; Telišman Prtenjak, Maja; Šoljan, Vinko; Horvat, Igor

2018-03-01

In this study, a synoptic and mesoscale analysis was performed and Szilagyi's waterspout forecasting method was tested on ten waterspout events in the period of 2013-2016. Data regarding waterspout occurrences were collected from weather stations, an online survey at the official website of the National Meteorological and Hydrological Service of Croatia and eyewitness reports from newspapers and the internet. Synoptic weather conditions were analyzed using surface pressure fields, 500 hPa level synoptic charts, SYNOP reports and atmospheric soundings. For all observed waterspout events, a synoptic type was determined using the 500 hPa geopotential height chart. The occurrence of lightning activity was determined from the LINET lightning database, and waterspouts were divided into thunderstorm-related and "fair weather" ones. Mesoscale characteristics (with a focus on thermodynamic instability indices) were determined using the high-resolution (500 m grid length) mesoscale numerical weather model and model results were compared with the available observations. Because thermodynamic instability indices are usually insufficient for forecasting waterspout activity, the performance of the Szilagyi Waterspout Index (SWI) was tested using vertical atmospheric profiles provided by the mesoscale numerical model. The SWI successfully forecasted all waterspout events, even the winter events. This indicates that the Szilagyi's waterspout prognostic method could be used as a valid prognostic tool for the eastern Adriatic.

A numerical model for the whole Wadden Sea: results on the hydrodynamics

NASA Astrophysics Data System (ADS)

Gräwe, Ulf; Duran-Matute, Matias; Gerkema, Theo; Flöser, Götz; Burchard, Hans

2015-04-01

A high-resolution baroclinic three-dimensional numerical model for the entire Wadden Sea of the German Bight in the southern North Sea is first validated against field data for surface elevation, current velocity, temperature and salinity at selected stations and then used to calculate fluxes of volume, heat and salt inside the Wadden Sea and the exchange between the Wadden Sea and the adjacent North Sea through the major tidal inlets. The General Estuarine Transport Model (GETM) is simulating the reference years 2009-2011. The numerical grid has a resolution of 200x200m and 30 adaptive vertical layers. It is the final stage of a multi-nested setup, starting from the North Atlantic. The atmospheric forcing is taken from the operational forecast of the German Weather Service. Additionally, the freshwater discharge of 23 local rivers and creeks are included. For validation, we use observations from a ship of opportunity measuring sea surface properties, tidal gauge stations, high frequency of salinity and volume transport estimates for the Mardiep and Spiekeroog inlet. Finally, the estuarine overturning circulation in three tidal gulleys is quantified. Regional differences between the gullies are assessed and drivers of the estuarine circulation are identified. Moreover, we will give a consistent estimate of the tidal prisms for all tidal inlets in the entire Wadden Sea.

Modeling the periodic stratification and gravitational circulation in San Francisco Bay, California

USGS Publications Warehouse

Cheng, Ralph T.; Casulli, Vincenzo

1996-01-01

A high resolution, three-dimensional (3-D) hydrodynamic numerical model is applied to San Francisco Bay, California to simulate the periodic tidal stratification caused by tidal straining and stirring and their long-term effects on gravitational circulation. The numerical model is formulated using fixed levels in the vertical and uniform computational mesh on horizontal planes. The governing conservation equations, the 3-D shallow water equations, are solved by a semi-implicit finite-difference scheme. Numerical simulations for estuarine flows in San Francisco Bay have been performed to reproduce the hydrodynamic properties of tides, tidal and residual currents, and salt transport. All simulations were carried out to cover at least 30 days, so that the spring-neap variance in the model results could be analyzed. High grid resolution used in the model permits the use of a simple turbulence closure scheme which has been shown to be sufficient to reproduce the tidal cyclic stratification and well-mixed conditions in the water column. Low-pass filtered 3-D time-series reveals the classic estuarine gravitational circulation with a surface layer flowing down-estuary and an up-estuary flow near the bottom. The intensity of the gravitational circulation depends upon the amount of freshwater inflow, the degree of stratification, and spring-neap tidal variations.

Improving Barotropic Tides by Two-way Nesting High and Low Resolution Domains

NASA Astrophysics Data System (ADS)

Jeon, C. H.; Buijsman, M. C.; Wallcraft, A. J.; Shriver, J. F.; Hogan, P. J.; Arbic, B. K.; Richman, J. G.

2017-12-01

In a realistically forced global ocean model, relatively large sea-surface-height root-mean-square (RMS) errors are observed in the North Atlantic near the Hudson Strait. These may be associated with large tidal resonances interacting with coastal bathymetry that are not correctly represented with a low resolution grid. This issue can be overcome by using high resolution grids, but at a high computational cost. In this paper we apply two-way nesting as an alternative solution. This approach applies high resolution to the area with large RMS errors and a lower resolution to the rest. It is expected to improve the tidal solution as well as reduce the computational cost. To minimize modification of the original source codes of the ocean circulation model (HYCOM), we apply the coupler OASIS3-MCT. This coupler is used to exchange barotropic pressures and velocity fields through its APIs (Application Programming Interface) between the parent and the child components. The developed two-way nesting framework has been validated with an idealized test case where the parent and the child domains have identical grid resolutions. The result of the idealized case shows very small RMS errors between the child and parent solutions. We plan to show results for a case with realistic tidal forcing in which the resolution of the child grid is three times that of the parent grid. The numerical results of this realistic case are compared to TPXO data.

Improvement of High-Resolution Tropical Cyclone Structure and Intensity Forecasts using COAMPS-TC

DTIC Science & Technology

2013-09-30

scientific community including the recent T- PARC /TCS08, ITOP, and HS3 field campaigns to build upon the existing modeling capabilities. We will...heating and cooling rates in developing and non-developing tropical disturbances during tcs-08: radar -equivalent retrievals from mesoscale numerical

Parallel Computation and Visualization of Three-dimensional, Time-dependent, Thermal Convective Flows

NASA Technical Reports Server (NTRS)

Wang, P.; Li, P.

1998-01-01

A high-resolution numerical study on parallel systems is reported on three-dimensional, time-dependent, thermal convective flows. A parallel implentation on the finite volume method with a multigrid scheme is discussed, and a parallel visualization systemm is developed on distributed systems for visualizing the flow.

Fibonacci Grids

NASA Technical Reports Server (NTRS)

Swinbank, Richard; Purser, James

2006-01-01

Recent years have seen a resurgence of interest in a variety of non-standard computational grids for global numerical prediction. The motivation has been to reduce problems associated with the converging meridians and the polar singularities of conventional regular latitude-longitude grids. A further impetus has come from the adoption of massively parallel computers, for which it is necessary to distribute work equitably across the processors; this is more practicable for some non-standard grids. Desirable attributes of a grid for high-order spatial finite differencing are: (i) geometrical regularity; (ii) a homogeneous and approximately isotropic spatial resolution; (iii) a low proportion of the grid points where the numerical procedures require special customization (such as near coordinate singularities or grid edges). One family of grid arrangements which, to our knowledge, has never before been applied to numerical weather prediction, but which appears to offer several technical advantages, are what we shall refer to as "Fibonacci grids". They can be thought of as mathematically ideal generalizations of the patterns occurring naturally in the spiral arrangements of seeds and fruit found in sunflower heads and pineapples (to give two of the many botanical examples). These grids possess virtually uniform and highly isotropic resolution, with an equal area for each grid point. There are only two compact singular regions on a sphere that require customized numerics. We demonstrate the practicality of these grids in shallow water simulations, and discuss the prospects for efficiently using these frameworks in three-dimensional semi-implicit and semi-Lagrangian weather prediction or climate models.

Computer synthesis of high resolution electron micrographs

NASA Technical Reports Server (NTRS)

Nathan, R.

1976-01-01

Specimen damage, spherical aberration, low contrast and noisy sensors combine to prevent direct atomic viewing in a conventional electron microscope. The paper describes two methods for obtaining ultra-high resolution in biological specimens under the electron microscope. The first method assumes the physical limits of the electron objective lens and uses a series of dark field images of biological crystals to obtain direct information on the phases of the Fourier diffraction maxima; this information is used in an appropriate computer to synthesize a large aperture lens for a 1-A resolution. The second method assumes there is sufficient amplitude scatter from images recorded in focus which can be utilized with a sensitive densitometer and computer contrast stretching to yield fine structure image details. Cancer virus characterization is discussed as an illustrative example. Numerous photographs supplement the text.

Doppler lidar for measurement of atmospheric wind fields

NASA Technical Reports Server (NTRS)

Menzies, Robert T.

1991-01-01

Measurements of wind fields in the earth's troposphere with daily global coverage is widely considered as a significant advance for forecasting and transport studies. For optimal use by NWP (Numerical Weather Prediction) models the horizontal and vertical resolutions should be approximately 100 km and 1 km, respectively. For boundary layer studies vertical resolution of a few hundred meters seems essential. Earth-orbiting Doppler lidar has a unique capability to measure global winds in the troposphere with the high vertical resolution required. The lidar approach depends on transmission of pulses with high spectral purity and backscattering from the atmospheric aerosol particles or layered clouds to provide a return signal. Recent field measurement campaigns using NASA research aircraft have resulted in collection of aerosol and cloud data which can be used to optimize the Doppler lidar instrument design and measurement strategy.

A High Resolution Spectroscopic Observation of CAL 83 with XMM-Newton/RGS

NASA Technical Reports Server (NTRS)

Paerels, Frits; Rasmussen, Andrew P.; Hartmann, H. W.; Heise, J.; Brinkman, A. C.; deVries, C. P.; denHerder, J.-W.

2000-01-01

We present the first high resolution photospheric X-ray spectrum of a Supersoft X-ray Source, the famous CAL 83 in the Large Magellanic Cloud. The spectrum was obtained with the Reflection Grating Spectrometer on XMM-Newton during the Calibration/Performance Verification phase of the observatory. The spectrum covers the range 20-40 A at an approximately constant resolution of 0.05 A, and shows very significant, intricate detail, that is very sensitive to the physical properties of the object. We present the results of an initial investigation of the spectrum, from which we draw the conclusion that the spectral structure is probably dominated by numerous absorption features due to transitions in the Gshells of the mid-2 elements and the M-shell of Fe, in addition to a few strong K-shell features due to CNO.

The Application of High Energy Resolution Green's Functions to Threat Scenario Simulation

NASA Astrophysics Data System (ADS)

Thoreson, Gregory G.; Schneider, Erich A.

2012-04-01

Radiation detectors installed at key interdiction points provide defense against nuclear smuggling attempts by scanning vehicles and traffic for illicit nuclear material. These hypothetical threat scenarios may be modeled using radiation transport simulations. However, high-fidelity models are computationally intensive. Furthermore, the range of smuggler attributes and detector technologies create a large problem space not easily overcome by brute-force methods. Previous research has demonstrated that decomposing the scenario into independently simulated components using Green's functions can simulate photon detector signals with coarse energy resolution. This paper extends this methodology by presenting physics enhancements and numerical treatments which allow for an arbitrary level of energy resolution for photon transport. As a result, spectroscopic detector signals produced from full forward transport simulations can be replicated while requiring multiple orders of magnitude less computation time.

Single objective light-sheet microscopy for high-speed whole-cell 3D super-resolution

PubMed Central

Meddens, Marjolein B. M.; Liu, Sheng; Finnegan, Patrick S.; Edwards, Thayne L.; James, Conrad D.; Lidke, Keith A.

2016-01-01

We have developed a method for performing light-sheet microscopy with a single high numerical aperture lens by integrating reflective side walls into a microfluidic chip. These 45° side walls generate light-sheet illumination by reflecting a vertical light-sheet into the focal plane of the objective. Light-sheet illumination of cells loaded in the channels increases image quality in diffraction limited imaging via reduction of out-of-focus background light. Single molecule super-resolution is also improved by the decreased background resulting in better localization precision and decreased photo-bleaching, leading to more accepted localizations overall and higher quality images. Moreover, 2D and 3D single molecule super-resolution data can be acquired faster by taking advantage of the increased illumination intensities as compared to wide field, in the focused light-sheet. PMID:27375939

Achieving superresolution with illumination-enhanced sparsity.

PubMed

Yu, Jiun-Yann; Becker, Stephen R; Folberth, James; Wallin, Bruce F; Chen, Simeng; Cogswell, Carol J

2018-04-16

Recent advances in superresolution fluorescence microscopy have been limited by a belief that surpassing two-fold resolution enhancement of the Rayleigh resolution limit requires stimulated emission or the fluorophore to undergo state transitions. Here we demonstrate a new superresolution method that requires only image acquisitions with a focused illumination spot and computational post-processing. The proposed method utilizes the focused illumination spot to effectively reduce the object size and enhance the object sparsity and consequently increases the resolution and accuracy through nonlinear image post-processing. This method clearly resolves 70nm resolution test objects emitting ~530nm light with a 1.4 numerical aperture (NA) objective, and, when imaging through a 0.5NA objective, exhibits high spatial frequencies comparable to a 1.4NA widefield image, both demonstrating a resolution enhancement above two-fold of the Rayleigh resolution limit. More importantly, we examine how the resolution increases with photon numbers, and show that the more-than-two-fold enhancement is achievable with realistic photon budgets.

Multiplicity of High-z Submillimeter Galaxies from Cosmological Simulations

NASA Astrophysics Data System (ADS)

Ball, David; Narayanan, Desika; Hopkins, Philip F.; Turk, Matthew

2015-01-01

Sub-millimeter galaxies (or SMG's) are some of the most luminous galaxies in the universe, yet are nearly invisible in the optical. Theorists have long struggled to simulate SMG's and accurately match their spectral properties and abundance to observations. Recent high-resolution observations, however, suggest that what were previously thought to be single sub-millimeter sources on the sky, may break up into multiple components when viewed with sufficient resolving power. Here, we present a combination of high-resolution cosmological hydrodynamic zoom simulations of massive galaxies in formation with a new dust radiative transfer package in order to understand this multiplicity in simulated SMGs. We find that multiplicity is a natural element of SMG formation as numerous subhalos bombard the central during its peak growth phase

Large scale superres 3D imaging: light-sheet single-molecule localization microscopy (Conference Presentation)

NASA Astrophysics Data System (ADS)

Lu, Chieh Han; Chen, Peilin; Chen, Bi-Chang

2017-02-01

Optical imaging techniques provide much important information in understanding life science especially cellular structure and morphology because "seeing is believing". However, the resolution of optical imaging is limited by the diffraction limit, which is discovered by Ernst Abbe, i.e. λ/2(NA) (NA is the numerical aperture of the objective lens). Fluorescence super-resolution microscopic techniques such as Stimulated emission depletion microscopy (STED), Photoactivated localization microscopy (PALM), and Stochastic optical reconstruction microscopy (STORM) are invented to have the capability of seeing biological entities down to molecular level that are smaller than the diffraction limit (around 200-nm in lateral resolution). These techniques do not physically violate the Abbe limit of resolution but exploit the photoluminescence properties and labelling specificity of fluorescence molecules to achieve super-resolution imaging. However, these super-resolution techniques limit most of their applications to the 2D imaging of fixed or dead samples due to the high laser power needed or slow speed for the localization process. Extended from 2D imaging, light sheet microscopy has been proven to have a lot of applications on 3D imaging at much better spatiotemporal resolutions due to its intrinsic optical sectioning and high imaging speed. Herein, we combine the advantage of localization microscopy and light-sheet microscopy to have super-resolved cellular imaging in 3D across large field of view. With high-density labeled spontaneous blinking fluorophore and wide-field detection of light-sheet microscopy, these allow us to construct 3D super-resolution multi-cellular imaging at high speed ( minutes) by light-sheet single-molecule localization microscopy.

Gridless, pattern-driven point cloud completion and extension

NASA Astrophysics Data System (ADS)

Gravey, Mathieu; Mariethoz, Gregoire

2016-04-01

While satellites offer Earth observation with a wide coverage, other remote sensing techniques such as terrestrial LiDAR can acquire very high-resolution data on an area that is limited in extension and often discontinuous due to shadow effects. Here we propose a numerical approach to merge these two types of information, thereby reconstructing high-resolution data on a continuous large area. It is based on a pattern matching process that completes the areas where only low-resolution data is available, using bootstrapped high-resolution patterns. Currently, the most common approach to pattern matching is to interpolate the point data on a grid. While this approach is computationally efficient, it presents major drawbacks for point clouds processing because a significant part of the information is lost in the point-to-grid resampling, and that a prohibitive amount of memory is needed to store large grids. To address these issues, we propose a gridless method that compares point clouds subsets without the need to use a grid. On-the-fly interpolation involves a heavy computational load, which is met by using a GPU high-optimized implementation and a hierarchical pattern searching strategy. The method is illustrated using data from the Val d'Arolla, Swiss Alps, where high-resolution terrestrial LiDAR data are fused with lower-resolution Landsat and WorldView-3 acquisitions, such that the density of points is homogeneized (data completion) and that it is extend to a larger area (data extension).

Evaluation of registration accuracy between Sentinel-2 and Landsat 8

NASA Astrophysics Data System (ADS)

Barazzetti, Luigi; Cuca, Branka; Previtali, Mattia

2016-08-01

Starting from June 2015, Sentinel-2A is delivering high resolution optical images (ground resolution up to 10 meters) to provide a global coverage of the Earth's land surface every 10 days. The planned launch of Sentinel-2B along with the integration of Landsat images will provide time series with an unprecedented revisit time indispensable for numerous monitoring applications, in which high resolution multi-temporal information is required. They include agriculture, water bodies, natural hazards to name a few. However, the combined use of multi-temporal images requires an accurate geometric registration, i.e. pixel-to-pixel correspondence for terrain-corrected products. This paper presents an analysis of spatial co-registration accuracy for several datasets of Sentinel-2 and Landsat 8 images distributed all around the world. Images were compared with digital correlation techniques for image matching, obtaining an evaluation of registration accuracy with an affine transformation as geometrical model. Results demonstrate that sub-pixel accuracy was achieved between 10 m resolution Sentinel-2 bands (band 3) and 15 m resolution panchromatic Landsat images (band 8).

Analysis of the impact of spatial resolution on land/water classifications using high-resolution aerial imagery

USGS Publications Warehouse

Enwright, Nicholas M.; Jones, William R.; Garber, Adrienne L.; Keller, Matthew J.

2014-01-01

Long-term monitoring efforts often use remote sensing to track trends in habitat or landscape conditions over time. To most appropriately compare observations over time, long-term monitoring efforts strive for consistency in methods. Thus, advances and changes in technology over time can present a challenge. For instance, modern camera technology has led to an increasing availability of very high-resolution imagery (i.e. submetre and metre) and a shift from analogue to digital photography. While numerous studies have shown that image resolution can impact the accuracy of classifications, most of these studies have focused on the impacts of comparing spatial resolution changes greater than 2 m. Thus, a knowledge gap exists on the impacts of minor changes in spatial resolution (i.e. submetre to about 1.5 m) in very high-resolution aerial imagery (i.e. 2 m resolution or less). This study compared the impact of spatial resolution on land/water classifications of an area dominated by coastal marsh vegetation in Louisiana, USA, using 1:12,000 scale colour-infrared analogue aerial photography (AAP) scanned at four different dot-per-inch resolutions simulating ground sample distances (GSDs) of 0.33, 0.54, 1, and 2 m. Analysis of the impact of spatial resolution on land/water classifications was conducted by exploring various spatial aspects of the classifications including density of waterbodies and frequency distributions in waterbody sizes. This study found that a small-magnitude change (1–1.5 m) in spatial resolution had little to no impact on the amount of water classified (i.e. percentage mapped was less than 1.5%), but had a significant impact on the mapping of very small waterbodies (i.e. waterbodies ≤ 250 m2). These findings should interest those using temporal image classifications derived from very high-resolution aerial photography as a component of long-term monitoring programs.

Impact of tropical cyclones on modeled extreme wind-wave climate

DOE PAGES

Timmermans, Ben; Stone, Daithi; Wehner, Michael; ...

2017-02-16

Here, the effect of forcing wind resolution on the extremes of global wind-wave climate are investigated in numerical simulations. Forcing winds from the Community Atmosphere Model at horizontal resolutions of ~1.0° and ~0.25° are used to drive Wavewatch III. Differences in extreme wave height are found to manifest most strongly in tropical cyclone (TC) regions, emphasizing the need for high-resolution forcing in those areas. Comparison with observations typically show improvement in performance with increased forcing resolution, with a strong influence in the tail of the distribution, although simulated extremes can exceed observations. A simulation for the end of the 21stmore » century under a RCP 8.5 type emission scenario suggests further increases in extreme wave height in TC regions.« less

Impact of tropical cyclones on modeled extreme wind-wave climate

NASA Astrophysics Data System (ADS)

Timmermans, Ben; Stone, Dáithí; Wehner, Michael; Krishnan, Harinarayan

2017-02-01

The effect of forcing wind resolution on the extremes of global wind-wave climate are investigated in numerical simulations. Forcing winds from the Community Atmosphere Model at horizontal resolutions of ˜1.0° and ˜0.25° are used to drive Wavewatch III. Differences in extreme wave height are found to manifest most strongly in tropical cyclone (TC) regions, emphasizing the need for high-resolution forcing in those areas. Comparison with observations typically show improvement in performance with increased forcing resolution, with a strong influence in the tail of the distribution, although simulated extremes can exceed observations. A simulation for the end of the 21st century under a RCP 8.5 type emission scenario suggests further increases in extreme wave height in TC regions.

Zonal wavefront sensing with enhanced spatial resolution.

PubMed

Pathak, Biswajit; Boruah, Bosanta R

2016-12-01

In this Letter, we introduce a scheme to enhance the spatial resolution of a zonal wavefront sensor. The zonal wavefront sensor comprises an array of binary gratings implemented by a ferroelectric spatial light modulator (FLCSLM) followed by a lens, in lieu of the array of lenses in the Shack-Hartmann wavefront sensor. We show that the fast response of the FLCSLM device facilitates quick display of several laterally shifted binary grating patterns, and the programmability of the device enables simultaneous capturing of each focal spot array. This eventually leads to a wavefront estimation with an enhanced spatial resolution without much sacrifice on the sensor frame rate, thus making the scheme suitable for high spatial resolution measurement of transient wavefronts. We present experimental and numerical simulation results to demonstrate the importance of the proposed wavefront sensing scheme.

Numerical Simulation and Scaling Analysis of Cell Printing

NASA Astrophysics Data System (ADS)

Qiao, Rui; He, Ping

2011-11-01

Cell printing, i.e., printing three dimensional (3D) structures of cells held in a tissue matrix, is gaining significant attention in the biomedical community. The key idea is to use inkjet printer or similar devices to print cells into 3D patterns with a resolution comparable to the size of mammalian cells. Achieving such a resolution in vitro can lead to breakthroughs in areas such as organ transplantation. Although the feasibility of cell printing has been demonstrated recently, the printing resolution and cell viability remain to be improved. Here we investigate a unit operation in cell printing, namely, the impact of a cell-laden droplet into a pool of highly viscous liquids. The droplet and cell dynamics are quantified using both direct numerical simulation and scaling analysis. These studies indicate that although cell experienced significant stress during droplet impact, the duration of such stress is very short, which helps explain why many cells can survive the cell printing process. These studies also revealed that cell membrane can be temporarily ruptured during cell printing, which is supported by indirect experimental evidence.

Novel Fourier-domain constraint for fast phase retrieval in coherent diffraction imaging.

PubMed

Latychevskaia, Tatiana; Longchamp, Jean-Nicolas; Fink, Hans-Werner

2011-09-26

Coherent diffraction imaging (CDI) for visualizing objects at atomic resolution has been realized as a promising tool for imaging single molecules. Drawbacks of CDI are associated with the difficulty of the numerical phase retrieval from experimental diffraction patterns; a fact which stimulated search for better numerical methods and alternative experimental techniques. Common phase retrieval methods are based on iterative procedures which propagate the complex-valued wave between object and detector plane. Constraints in both, the object and the detector plane are applied. While the constraint in the detector plane employed in most phase retrieval methods requires the amplitude of the complex wave to be equal to the squared root of the measured intensity, we propose a novel Fourier-domain constraint, based on an analogy to holography. Our method allows achieving a low-resolution reconstruction already in the first step followed by a high-resolution reconstruction after further steps. In comparison to conventional schemes this Fourier-domain constraint results in a fast and reliable convergence of the iterative reconstruction process. © 2011 Optical Society of America

Ultra high resolution imaging of the human head at 8 tesla: 2K x 2K for Y2K.

PubMed

Robitaille, P M; Abduljalil, A M; Kangarlu, A

2000-01-01

To acquire ultra high resolution MRI images of the human brain at 8 Tesla within a clinically acceptable time frame. Gradient echo images were acquired from the human head of normal subjects using a transverse electromagnetic resonator operating in quadrature and tuned to 340 MHz. In each study, a group of six images was obtained containing a total of 208 MB of unprocessed information. Typical acquisition parameters were as follows: matrix = 2,000 x 2,000, field of view = 20 cm, slice thickness = 2 mm, number of excitations (NEX) = 1, flip angle = 45 degrees, TR = 750 ms, TE = 17 ms, receiver bandwidth = 69.4 kHz. This resulted in a total scan time of 23 minutes, an in-plane resolution of 100 microm, and a pixel volume of 0.02 mm3. The ultra high resolution images acquired in this study represent more than a 50-fold increase in in-plane resolution relative to conventional 256 x 256 images obtained with a 20 cm field of view and a 5 mm slice thickness. Nonetheless, the ultra high resolution images could be acquired both with adequate image quality and signal to noise. They revealed numerous small venous structures throughout the image plane and provided reasonable delineation between gray and white matter. The elevated signal-to-noise ratio observed in ultra high field magnetic resonance imaging can be utilized to acquire images with a level of resolution approaching the histological level under in vivo conditions. However, brain motion is likely to degrade the useful resolution. This situation may be remedied in part with cardiac gating. Nonetheless, these images represent a significant advance in our ability to examine small anatomical features with noninvasive imaging methods.

A stochastic ensemble-based model to predict crop water requirements from numerical weather forecasts and VIS-NIR high resolution satellite images in Southern Italy

NASA Astrophysics Data System (ADS)

Pelosi, Anna; Falanga Bolognesi, Salvatore; De Michele, Carlo; Medina Gonzalez, Hanoi; Villani, Paolo; D'Urso, Guido; Battista Chirico, Giovanni

2015-04-01

Irrigation agriculture is one the biggest consumer of water in Europe, especially in southern regions, where it accounts for up to 70% of the total water consumption. The EU Common Agricultural Policy, combined with the Water Framework Directive, imposes to farmers and irrigation managers a substantial increase of the efficiency in the use of water in agriculture for the next decade. Ensemble numerical weather predictions can be valuable data for developing operational advisory irrigation services. We propose a stochastic ensemble-based model providing spatial and temporal estimates of crop water requirements, implemented within an advisory service offering detailed maps of irrigation water requirements and crop water consumption estimates, to be used by water irrigation managers and farmers. The stochastic model combines estimates of crop potential evapotranspiration retrieved from ensemble numerical weather forecasts (COSMO-LEPS, 16 members, 7 km resolution) and canopy parameters (LAI, albedo, fractional vegetation cover) derived from high resolution satellite images in the visible and near infrared wavelengths. The service provides users with daily estimates of crop water requirements for lead times up to five days. The temporal evolution of the crop potential evapotranspiration is simulated with autoregressive models. An ensemble Kalman filter is employed for updating model states by assimilating both ground based meteorological variables (where available) and numerical weather forecasts. The model has been applied in Campania region (Southern Italy), where a satellite assisted irrigation advisory service has been operating since 2006. This work presents the results of the system performance for one year of experimental service. The results suggest that the proposed model can be an effective support for a sustainable use and management of irrigation water, under conditions of water scarcity and drought. Since the evapotranspiration term represents a staple component in the water balance of a catchment, as outstanding future development, the model could also offer an advanced support for water resources management decisions at catchment scale.

Theoretical simulation of solar spectra in the middle ultraviolet and visible for atmospheric trace constituent measurements

NASA Technical Reports Server (NTRS)

Goldman, A.

1978-01-01

Two balloon flights reaching float altitudes of approximately 30 and 40 km respectively, were used to obtain scans of the ultraviolet and visible solar spectra. Both flights covered the UV (2800-3500A) at approximately 0.3A resolution and the visible at approximately 0.6A. Numerous scans were obtained during ascent and from float for both flights. All spectral scans obtained at float, from high sun to low sun, were calibrated in wavelength by using several standard solar spectra for line position references. Comparisons of low sun scans and high sun scans show significant atmospheric continuum extinction and have the potential of being used to identify atmospheric lines superimposed on the attenuated solar spectrum. The resolution was mathematically degraded to approximately 5A to better see the broad band atmospheric extinction. This low resolution is also appropriate for the available low resolution absorption coefficients of NO2 and O3, allowing the identification of NO2 and O3 features on the sunset spectra.

A Coastal Bay Summer Breeze Study, Part 2: High-resolution Numerical Simulation of Sea-breeze Local Influences

NASA Astrophysics Data System (ADS)

Calmet, Isabelle; Mestayer, Patrice G.; van Eijk, Alexander M. J.; Herlédant, Olivier

2018-04-01

We complete the analysis of the data obtained during the experimental campaign around the semi circular bay of Quiberon, France, during two weeks in June 2006 (see Part 1). A reanalysis of numerical simulations performed with the Advanced Regional Prediction System model is presented. Three nested computational domains with increasing horizontal resolution down to 100 m, and a vertical resolution of 10 m at the lowest level, are used to reproduce the local-scale variations of the breeze close to the water surface of the bay. The Weather Research and Forecasting mesoscale model is used to assimilate the meteorological data. Comparisons of the simulations with the experimental data obtained at three sites reveal a good agreement of the flow over the bay and around the Quiberon peninsula during the daytime periods of sea-breeze development and weakening. In conditions of offshore synoptic flow, the simulations demonstrate that the semi-circular shape of the bay induces a corresponding circular shape in the offshore zones of stagnant flow preceding the sea-breeze onset, which move further offshore thereafter. The higher-resolution simulations are successful in reproducing the small-scale impacts of the peninsula and local coasts (breeze deviations, wakes, flow divergences), and in demonstrating the complexity of the breeze fields close to the surface over the bay. Our reanalysis also provides guidance for numerical simulation strategies for analyzing the structure and evolution of the near-surface breeze over a semi-circular bay, and for forecasting important flow details for use in upcoming sailing competitions.

Data Analysis and Non-local Parametrization Strategies for Organized Atmospheric Convection

NASA Astrophysics Data System (ADS)

Brenowitz, Noah D.

The intrinsically multiscale nature of moist convective processes in the atmosphere complicates scientific understanding, and, as a result, current coarse-resolution climate models poorly represent convective variability in the tropics. This dissertation addresses this problem by 1) studying new cumulus convective closures in a pair of idealized models for tropical moist convection, and 2) developing innovative strategies for analyzing high-resolution numerical simulations of organized convection. The first two chapters of this dissertation revisit a historical controversy about the use of convective closures based on the large-scale wind field or moisture convergence. In the first chapter, a simple coarse resolution stochastic model for convective inhibition is designed which includes the non-local effects of wind-convergence on convective activity. This model is designed to replicate the convective dynamics of a typical coarse-resolution climate prediction model. The non-local convergence coupling is motivated by the phenomena of gregarious convection, whereby mesoscale convective systems emit gravity waves which can promote convection at a distant locations. Linearized analysis and nonlinear simulations show that this convergence coupling allows for increased interaction between cumulus convection and the large-scale circulation, but does not suffer from the deleterious behavior of traditional moisture-convergence closures. In the second chapter, the non-local convergence coupling idea is extended to an idealized stochastic multicloud model. This model allows for stochastic transitions between three distinct cloud types, and non-local convergence coupling is most beneficial when applied to the transition from shallow to deep convection. This is consistent with recent observational and numerical modeling evidence, and there is a growing body of work highlighting the importance of this transition in tropical meteorology. In a series of idealized Walker cell simulations, convergence coupling enhances the persistence of Kelvin wave analogs in dry regions of the domain while leaving the dynamics in moist regions largely unaltered. The final chapter of this dissertation presents a technique for analyzing the variability of a direct numerical simulation of Rayleigh-Benard convection at large aspect ratio, which is a basic prototype of convective organization. High resolution numerical models are an invaluable tool for studying atmospheric dynamics, but modern data analysis techniques struggle with the extreme size of the model outputs and the trivial symmetries of the underlying dynamical systems (e.g. shift-invariance). A new data analysis approach which is invariant to spatial symmetries is derived by combining a quasi-Lagrangian description of the data, time-lagged embedding, and manifold learning techniques. The quasi-Lagrangian description is obtained by a straightforward isothermal binning procedure, which compresses the data in a dynamically-aware fashion. A small number of orthogonal modes returned by this algorithm are able to explain the highly intermittent dynamics of the bulk heat transfer, as quantified by the Nusselt Number.

What is the diffraction limit? From Airy to Abbe using direct numerical integration

NASA Astrophysics Data System (ADS)

Calm, Y. M.; Merlo, J. M.; Burns, M. J.; Kempa, K.; Naughton, M. J.

The resolution of a conventional optical microscope is sometimes taken from Airy's point spread function (PSF), 0 . 61 λ / NA , and sometimes from Abbe, λ / 2 NA , where NA is the numerical aperture, however modern fluorescence and near-field optical microscopies achieve spatial resolution far better than either of these limits. There is a new category of 2D metamaterials called planar optical elements (POEs), which have a microscopic thickness (< λ), macroscopic transverse dimensions (> 100 λ), and are composed of an array of nanostructured light scatterers. POEs are found in a range of micro- and nano-photonic technologies, and will influence the future optical nanoscopy. With this pretext, we shed some light on the 'diffraction limit' by numerically evaluating Kirchhoff's scalar formulae (in their exact form) and identifying the features of highly non-paraxial, 3D PSFs. We show that the Airy and Abbe criteria are connected, and we comment on the design rules for a particular type of POE: the flat lens. This work is supported by the W. M. Keck Foundation.

High-NA EUV lithography enabling Moore's law in the next decade

NASA Astrophysics Data System (ADS)

van Schoot, Jan; Troost, Kars; Bornebroek, Frank; van Ballegoij, Rob; Lok, Sjoerd; Krabbendam, Peter; Stoeldraijer, Judon; Loopstra, Erik; Benschop, Jos P.; Finders, Jo; Meiling, Hans; van Setten, Eelco; Kneer, Bernhard; Kuerz, Peter; Kaiser, Winfried; Heil, Tilmann; Migura, Sascha; Neumann, Jens Timo

2017-10-01

While EUV systems equipped with a 0.33 Numerical Aperture lenses are readying to start volume manufacturing, ASML and Zeiss are ramping up their activities on a EUV exposure tool with Numerical Aperture of 0.55. The purpose of this scanner, targeting an ultimate resolution of 8nm, is to extend Moore's law throughout the next decade. A novel, anamorphic lens design, capable of providing the required Numerical Aperture has been investigated; This lens will be paired with new, faster stages and more accurate sensors enabling Moore's law economical requirements, as well as the tight focus and overlay control needed for future process nodes. The tighter focus and overlay control budgets, as well as the anamorphic optics, will drive innovations in the imaging and OPC modelling. Furthermore, advances in resist and mask technology will be required to image lithography features with less than 10nm resolution. This paper presents an overview of the target specifications, key technology innovations and imaging simulations demonstrating the advantages as compared to 0.33NA and showing the capabilities of the next generation EUV systems.

Hurricane Forecasting with the High-resolution NASA Finite-volume General Circulation Model

NASA Technical Reports Server (NTRS)

Atlas, R.; Reale, O.; Shen, B.-W.; Lin, S.-J.; Chern, J.-D.; Putman, W.; Lee, T.; Yeh, K.-S.; Bosilovich, M.; Radakovich, J.

2004-01-01

A high-resolution finite-volume General Circulation Model (fvGCM), resulting from a development effort of more than ten years, is now being run operationally at the NASA Goddard Space Flight Center and Ames Research Center. The model is based on a finite-volume dynamical core with terrain-following Lagrangian control-volume discretization and performs efficiently on massive parallel architectures. The computational efficiency allows simulations at a resolution of a quarter of a degree, which is double the resolution currently adopted by most global models in operational weather centers. Such fine global resolution brings us closer to overcoming a fundamental barrier in global atmospheric modeling for both weather and climate, because tropical cyclones and even tropical convective clusters can be more realistically represented. In this work, preliminary results of the fvGCM are shown. Fifteen simulations of four Atlantic tropical cyclones in 2002 and 2004 are chosen because of strong and varied difficulties presented to numerical weather forecasting. It is shown that the fvGCM, run at the resolution of a quarter of a degree, can produce very good forecasts of these tropical systems, adequately resolving problems like erratic track, abrupt recurvature, intense extratropical transition, multiple landfall and reintensification, and interaction among vortices.

Image acquisition with immersion objective lenses using electrons emitted with several tenths of an electron volt energies: towards high spatial resolution ESCA analysis.

PubMed

Bernheim, M

2006-03-01

This study aims to evaluate the spatial resolution achievable with photoelectrons in order to perform localised UPS or XPS analyses on various heterogeneous samples. This investigation is intentionally restricted to direct image acquisition by immersion objective lenses, involving electrons ejected with initial energies of several tenths of an electron-volt. In order to characterise the contribution of all optical elements, analytical investigations were associated to numerical simulations based on SIMION 7 software. The acquisition of high-quality images implies a simultaneous reduction in spherical and chromatic aberrations by a narrow aperture stop placed at the output pupil of the objective. With such limitations in useful emission angles, it is shown that monochromatic electron beams build images with a resolution of about 1 nm, especially for the acceleration bias mode where the focussing electrode is biased at a positive high voltage. Even energy dispersed electron beams, limited by a 4 eV band pass spectrometer, can produce images convenient for highly localised ESCA analyses (resolution 3 nm), where the objective lens is associated with an aperture stop of 30 microm in diameter without using acceleration voltages above 5000 V.

Dictionary-based image reconstruction for superresolution in integrated circuit imaging.

PubMed

Cilingiroglu, T Berkin; Uyar, Aydan; Tuysuzoglu, Ahmet; Karl, W Clem; Konrad, Janusz; Goldberg, Bennett B; Ünlü, M Selim

2015-06-01

Resolution improvement through signal processing techniques for integrated circuit imaging is becoming more crucial as the rapid decrease in integrated circuit dimensions continues. Although there is a significant effort to push the limits of optical resolution for backside fault analysis through the use of solid immersion lenses, higher order laser beams, and beam apodization, signal processing techniques are required for additional improvement. In this work, we propose a sparse image reconstruction framework which couples overcomplete dictionary-based representation with a physics-based forward model to improve resolution and localization accuracy in high numerical aperture confocal microscopy systems for backside optical integrated circuit analysis. The effectiveness of the framework is demonstrated on experimental data.

Unraveling the martian water cycle with high-resolution global climate simulations

NASA Astrophysics Data System (ADS)

Pottier, Alizée; Forget, François; Montmessin, Franck; Navarro, Thomas; Spiga, Aymeric; Millour, Ehouarn; Szantai, André; Madeleine, Jean-Baptiste

2017-07-01

Global climate modeling of the Mars water cycle is usually performed at relatively coarse resolution (200 - 300km), which may not be sufficient to properly represent the impact of waves, fronts, topography effects on the detailed structure of clouds and surface ice deposits. Here, we present new numerical simulations of the annual water cycle performed at a resolution of 1° × 1° (∼ 60 km in latitude). The model includes the radiative effects of clouds, whose influence on the thermal structure and atmospheric dynamics is significant, thus we also examine simulations with inactive clouds to distinguish the direct impact of resolution on circulation and winds from the indirect impact of resolution via water ice clouds. To first order, we find that the high resolution does not dramatically change the behavior of the system, and that simulations performed at ∼ 200 km resolution capture well the behavior of the simulated water cycle and Mars climate. Nevertheless, a detailed comparison between high and low resolution simulations, with reference to observations, reveal several significant changes that impact our understanding of the water cycle active today on Mars. The key northern cap edge dynamics are affected by an increase in baroclinic wave strength, with a complication of northern summer dynamics. South polar frost deposition is modified, with a westward longitudinal shift, since southern dynamics are also influenced. Baroclinic wave mode transitions are observed. New transient phenomena appear, like spiral and streak clouds, already documented in the observations. Atmospheric circulation cells in the polar region exhibit a large variability and are fine structured, with slope winds. Most modeled phenomena affected by high resolution give a picture of a more turbulent planet, inducing further variability. This is challenging for long-period climate studies.

Spread spectrum phase modulation for coherent X-ray diffraction imaging.

PubMed

Zhang, Xuesong; Jiang, Jing; Xiangli, Bin; Arce, Gonzalo R

2015-09-21

High dynamic range, phase ambiguity and radiation limited resolution are three challenging issues in coherent X-ray diffraction imaging (CXDI), which limit the achievable imaging resolution. This paper proposes a spread spectrum phase modulation (SSPM) method to address the aforementioned problems in a single strobe. The requirements on phase modulator parameters are presented, and a practical implementation of SSPM is discussed via ray optics analysis. Numerical experiments demonstrate the performance of SSPM under the constraint of available X-ray optics fabrication accuracy, showing its potential to real CXDI applications.

Numerical predictions of shock propagation through unreactive and reactive liquids with experimental validation

NASA Astrophysics Data System (ADS)

Stekovic, Svjetlana; Nissen, Erin; Bhowmick, Mithun; Stewart, Donald S.; Dlott, Dana D.

2017-06-01

The objective of this work is to numerically analyze shock behavior as it propagates through compressed, unreactive and reactive liquid, such as liquid water and liquid nitromethane. Parameters, such as pressure and density, are analyzed using the Mie-Gruneisen EOS and each multi-material system is modeled using the ALE3D software. The motivation for this study is based on provided high-resolution, optical interferometer (PDV) and optical pyrometer measurements. In the experimental set-up, a liquid is placed between an Al 1100 plate and Pyrex BK-7 glass. A laser-driven Al 1100 flyer impacts the plate, causing the liquid to be highly compressed. The numerical model investigates the influence of the high pressure, shock-compressed behavior in each liquid, the energy transfer, and the wave impedance at the interface of each material in contact. The numerical results using ALE3D will be validated by experimental data. This work aims to provide further understanding of shock-compressed behavior and how the shock influences phase transition in each liquid.

Multi-shot PROPELLER for high-field preclinical MRI

PubMed Central

Pandit, Prachi; Qi, Yi; Story, Jennifer; King, Kevin F.; Johnson, G. Allan

2012-01-01

With the development of numerous mouse models of cancer, there is a tremendous need for an appropriate imaging technique to study the disease evolution. High-field T2-weighted imaging using PROPELLER MRI meets this need. The 2-shot PROPELLER technique presented here, provides (a) high spatial resolution, (b) high contrast resolution, and (c) rapid and non-invasive imaging, which enables high-throughput, longitudinal studies in free-breathing mice. Unique data collection and reconstruction makes this method robust against motion artifacts. The 2-shot modification introduced here, retains more high-frequency information and provides higher SNR than conventional single-shot PROPELLER, making this sequence feasible at high-fields, where signal loss is rapid. Results are shown in a liver metastases model to demonstrate the utility of this technique in one of the more challenging regions of the mouse, which is the abdomen. PMID:20572138

Multishot PROPELLER for high-field preclinical MRI.

PubMed

Pandit, Prachi; Qi, Yi; Story, Jennifer; King, Kevin F; Johnson, G Allan

2010-07-01

With the development of numerous mouse models of cancer, there is a tremendous need for an appropriate imaging technique to study the disease evolution. High-field T(2)-weighted imaging using PROPELLER (Periodically Rotated Overlapping ParallEL Lines with Enhanced Reconstruction) MRI meets this need. The two-shot PROPELLER technique presented here provides (a) high spatial resolution, (b) high contrast resolution, and (c) rapid and noninvasive imaging, which enables high-throughput, longitudinal studies in free-breathing mice. Unique data collection and reconstruction makes this method robust against motion artifacts. The two-shot modification introduced here retains more high-frequency information and provides higher signal-to-noise ratio than conventional single-shot PROPELLER, making this sequence feasible at high fields, where signal loss is rapid. Results are shown in a liver metastases model to demonstrate the utility of this technique in one of the more challenging regions of the mouse, which is the abdomen. (c) 2010 Wiley-Liss, Inc.

Resolution dependence of precipitation statistical fidelity in hindcast simulations

DOE PAGES

O'Brien, Travis A.; Collins, William D.; Kashinath, Karthik; ...

2016-06-19

This article is a U.S. Government work and is in the public domain in the USA. Numerous studies have shown that atmospheric models with high horizontal resolution better represent the physics and statistics of precipitation in climate models. While it is abundantly clear from these studies that high-resolution increases the rate of extreme precipitation, it is not clear whether these added extreme events are “realistic”; whether they occur in simulations in response to the same forcings that drive similar events in reality. In order to understand whether increasing horizontal resolution results in improved model fidelity, a hindcast-based, multiresolution experimental designmore » has been conceived and implemented: the InitiaLIzed-ensemble, Analyze, and Develop (ILIAD) framework. The ILIAD framework allows direct comparison between observed and simulated weather events across multiple resolutions and assessment of the degree to which increased resolution improves the fidelity of extremes. Analysis of 5 years of daily 5 day hindcasts with the Community Earth System Model at horizontal resolutions of 220, 110, and 28 km shows that: (1) these hindcasts reproduce the resolution-dependent increase of extreme precipitation that has been identified in longer-duration simulations, (2) the correspondence between simulated and observed extreme precipitation improves as resolution increases; and (3) this increase in extremes and precipitation fidelity comes entirely from resolved-scale precipitation. Evidence is presented that this resolution-dependent increase in precipitation intensity can be explained by the theory of Rauscher et al. (), which states that precipitation intensifies at high resolution due to an interaction between the emergent scaling (spectral) properties of the wind field and the constraint of fluid continuity.« less

Resolution dependence of precipitation statistical fidelity in hindcast simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

O'Brien, Travis A.; Collins, William D.; Kashinath, Karthik

This article is a U.S. Government work and is in the public domain in the USA. Numerous studies have shown that atmospheric models with high horizontal resolution better represent the physics and statistics of precipitation in climate models. While it is abundantly clear from these studies that high-resolution increases the rate of extreme precipitation, it is not clear whether these added extreme events are “realistic”; whether they occur in simulations in response to the same forcings that drive similar events in reality. In order to understand whether increasing horizontal resolution results in improved model fidelity, a hindcast-based, multiresolution experimental designmore » has been conceived and implemented: the InitiaLIzed-ensemble, Analyze, and Develop (ILIAD) framework. The ILIAD framework allows direct comparison between observed and simulated weather events across multiple resolutions and assessment of the degree to which increased resolution improves the fidelity of extremes. Analysis of 5 years of daily 5 day hindcasts with the Community Earth System Model at horizontal resolutions of 220, 110, and 28 km shows that: (1) these hindcasts reproduce the resolution-dependent increase of extreme precipitation that has been identified in longer-duration simulations, (2) the correspondence between simulated and observed extreme precipitation improves as resolution increases; and (3) this increase in extremes and precipitation fidelity comes entirely from resolved-scale precipitation. Evidence is presented that this resolution-dependent increase in precipitation intensity can be explained by the theory of Rauscher et al. (), which states that precipitation intensifies at high resolution due to an interaction between the emergent scaling (spectral) properties of the wind field and the constraint of fluid continuity.« less

High resolution microscopy of the lipid layer of the tear film.

PubMed

King-Smith, P Ewen; Nichols, Jason J; Braun, Richard J; Nichols, Kelly K

2011-10-01

Tear film evaporation is controlled by the lipid layer and is an important factor in dry eye conditions. Because the barrier to evaporation depends on the structure of the lipid layer, a high resolution microscope has been constructed to study the lipid layer in dry and in normal eyes. The microscope incorporates the following features. First, a long working distance microscope objective is used with a high numerical aperture and resolution. Second, because such a high resolution objective has limited depth of focus, 2000 images are recorded with a video camera over a 20-sec period, with the expectation that some images will be in focus. Third, illumination is from a stroboscopic light source having a brief flash duration, to avoid blurring from movement of the lipid layer. Fourth, the image is in focus when the edge of the image is sharp - this feature is used to select images in good focus. Fifth, an aid is included to help align the cornea at normal incidence to the axis of the objective so that the whole lipid image can be in focus. High resolution microscopy has the potential to elucidate several characteristics of the normal and abnormal lipid layer, including different objects and backgrounds, changes in the blink cycle, stability and fluidity, dewetting, gel-like properties and possible relation to lipid domains. It is expected that high resolution microscopy of the lipid layer will provide information about the mechanisms of dry eye disorders. Illustrative results are presented, derived from over 10,000 images from 375 subjects.

High-resolution two-dimensional and three-dimensional modeling of wire grid polarizers and micropolarizer arrays

NASA Astrophysics Data System (ADS)

Vorobiev, Dmitry; Ninkov, Zoran

2017-11-01

Recent advances in photolithography allowed the fabrication of high-quality wire grid polarizers for the visible and near-infrared regimes. In turn, micropolarizer arrays (MPAs) based on wire grid polarizers have been developed and used to construct compact, versatile imaging polarimeters. However, the contrast and throughput of these polarimeters are significantly worse than one might expect based on the performance of large area wire grid polarizers or MPAs, alone. We investigate the parameters that affect the performance of wire grid polarizers and MPAs, using high-resolution two-dimensional and three-dimensional (3-D) finite-difference time-domain simulations. We pay special attention to numerical errors and other challenges that arise in models of these and other subwavelength optical devices. Our tests show that simulations of these structures in the visible and near-IR begin to converge numerically when the mesh size is smaller than ˜4 nm. The performance of wire grid polarizers is very sensitive to the shape, spacing, and conductivity of the metal wires. Using 3-D simulations of micropolarizer "superpixels," we directly study the cross talk due to diffraction at the edges of each micropolarizer, which decreases the contrast of MPAs to ˜200∶1.

Online Wavelet Complementary velocity Estimator.

PubMed

Righettini, Paolo; Strada, Roberto; KhademOlama, Ehsan; Valilou, Shirin

2018-02-01

In this paper, we have proposed a new online Wavelet Complementary velocity Estimator (WCE) over position and acceleration data gathered from an electro hydraulic servo shaking table. This is a batch estimator type that is based on the wavelet filter banks which extract the high and low resolution of data. The proposed complementary estimator combines these two resolutions of velocities which acquired from numerical differentiation and integration of the position and acceleration sensors by considering a fixed moving horizon window as input to wavelet filter. Because of using wavelet filters, it can be implemented in a parallel procedure. By this method the numerical velocity is estimated without having high noise of differentiators, integration drifting bias and with less delay which is suitable for active vibration control in high precision Mechatronics systems by Direct Velocity Feedback (DVF) methods. This method allows us to make velocity sensors with less mechanically moving parts which makes it suitable for fast miniature structures. We have compared this method with Kalman and Butterworth filters over stability, delay and benchmarked them by their long time velocity integration for getting back the initial position data. Copyright © 2017 ISA. Published by Elsevier Ltd. All rights reserved.

The atmospheric boundary layer — advances in knowledge and application

NASA Astrophysics Data System (ADS)

Garratt, J. R.; Hess, G. D.; Physick, W. L.; Bougeault, P.

1996-02-01

We summarise major activities and advances in boundary-layer knowledge in the 25 years since 1970, with emphasis on the application of this knowledge to surface and boundary-layer parametrisation schemes in numerical models of the atmosphere. Progress in three areas is discussed: (i) the mesoscale modelling of selected phenomena; (ii) numerical weather prediction; and (iii) climate simulations. Future trends are identified, including the incorporation into models of advanced cloud schemes and interactive canopy schemes, and the nesting of high resolution boundary-layer schemes in global climate models.

High-resolution DEM Effects on Geophysical Flow Models

NASA Astrophysics Data System (ADS)

Williams, M. R.; Bursik, M. I.; Stefanescu, R. E. R.; Patra, A. K.

2014-12-01

Geophysical mass flow models are numerical models that approximate pyroclastic flow events and can be used to assess the volcanic hazards certain areas may face. One such model, TITAN2D, approximates granular-flow physics based on a depth-averaged analytical model using inputs of basal and internal friction, material volume at a coordinate point, and a GIS in the form of a digital elevation model (DEM). The volume of modeled material propagates over the DEM in a way that is governed by the slope and curvature of the DEM surface and the basal and internal friction angles. Results from TITAN2D are highly dependent upon the inputs to the model. Here we focus on a single input: the DEM, which can vary in resolution. High resolution DEMs are advantageous in that they contain more surface details than lower-resolution models, presumably allowing modeled flows to propagate in a way more true to the real surface. However, very high resolution DEMs can create undesirable artifacts in the slope and curvature that corrupt flow calculations. With high-resolution DEMs becoming more widely available and preferable for use, determining the point at which high resolution data is less advantageous compared to lower resolution data becomes important. We find that in cases of high resolution, integer-valued DEMs, very high-resolution is detrimental to good model outputs when moderate-to-low (<10-15°) slope angles are involved. At these slope angles, multiple adjacent DEM cell elevation values are equal due to the need for the DEM to approximate the low slope with a limited set of integer values for elevation. The first derivative of the elevation surface thus becomes zero. In these cases, flow propagation is inhibited by these spurious zero-slope conditions. Here we present evidence for this "terracing effect" from 1) a mathematically defined simulated elevation model, to demonstrate the terracing effects of integer valued data, and 2) a real-world DEM where terracing must be addressed. We discuss the effect on the flow model output and present possible solutions for rectification of the problem.

The generation and use of numerical shape models for irregular Solar System objects

NASA Technical Reports Server (NTRS)

Simonelli, Damon P.; Thomas, Peter C.; Carcich, Brian T.; Veverka, Joseph

1993-01-01

We describe a procedure that allows the efficient generation of numerical shape models for irregular Solar System objects, where a numerical model is simply a table of evenly spaced body-centered latitudes and longitudes and their associated radii. This modeling technique uses a combination of data from limbs, terminators, and control points, and produces shape models that have some important advantages over analytical shape models. Accurate numerical shape models make it feasible to study irregular objects with a wide range of standard scientific analysis techniques. These applications include the determination of moments of inertia and surface gravity, the mapping of surface locations and structural orientations, photometric measurement and analysis, the reprojection and mosaicking of digital images, and the generation of albedo maps. The capabilities of our modeling procedure are illustrated through the development of an accurate numerical shape model for Phobos and the production of a global, high-resolution, high-pass-filtered digital image mosaic of this Martian moon. Other irregular objects that have been modeled, or are being modeled, include the asteroid Gaspra and the satellites Deimos, Amalthea, Epimetheus, Janus, Hyperion, and Proteus.

Insights into the evolution of the Yenkahe resurgent dome (Siwi caldera, Tanna Island, Vanuatu) inferred from aerial high-resolution photogrammetry

NASA Astrophysics Data System (ADS)

Brothelande, E.; Lénat, J.-F.; Normier, A.; Bacri, C.; Peltier, A.; Paris, R.; Kelfoun, K.; Merle, O.; Finizola, A.; Garaebiti, E.

2016-08-01

The Yenkahe dome (Tanna Island, Vanuatu) is one of the most spectacular examples of presently active post-caldera resurgence, exhibiting a very high uplift rate over the past 1000 years (156 mm/year on average). Although numerous inhabited areas are scattered around the dome, the dynamics of this structure and associated hazards remain poorly studied because of its remote location and dense vegetation cover. A high-resolution photogrammetric campaign was carried out in November 2011 over the dome. Georeferenced photographs were treated by "Structure from Motion" and "Multiple-view Stereophotogrammetry" methods to produce a 3D-digital surface model (DSM) of the area and its associated orthophotograph. This DSM is much more accurate than previously available SRTM and Aster digital elevation models (DEMs), particularly at minimal (coastline) and maximal altitudes (Yasur culmination point, 390 m). While previous mapping relied mostly on low resolution DEMs and satellite images, the high precision of the DSM allows for a detailed structural analysis of the Yenkahe dome, notably based on the quantification of fault displacements. The new structural map, inferred from the 3D reconstruction and morphological analysis of the dome, reveals a complex pattern of faults and destabilization scars reflecting a succession of constructive and destructive events. Numerous landslide scars directed toward the sea highlight the probable occurrence of a tsunami event affecting the south-eastern coast of Tanna. Simulations of landslide-triggered tsunamis show the short time propagation of such a wave (1-2 min), which could affect coastal localities even following relatively small destabilized volumes (a few million cubic meters).

High Resolution Image From Viking Lander 1

NASA Image and Video Library

1996-12-12

NASA's Viking 1 took this high-resolution picture today, its third day on Mars. Distance from the camera to the nearfield (bottom) is about 4 meters (13 feet); to the horizon, about 3 kilometers (1.8 miles). The photo shows numerous angular blocks ranging in size from a few centimeters to several meters. The surface between the blocks is composed of fine-grained material. Accumulation of some fine-grained material behind blocks indicates wind deposition of dust and sand downwind of obstacles. The large block on the horizon is about 4 meters (13 feet) wide. Distance across the horizon is about 34 meters (110 feet). http://photojournal.jpl.nasa.gov/catalog/PIA00385

DOE Office of Scientific and Technical Information (OSTI.GOV)

Suvorov, Alexey; Cai, Yong Q.

A concept of an inelastic x-ray scattering (IXS) spectrograph with an imaging analyzer was proposed recently and discussed in a number of publications (see e.g. Ref.1). The imaging analyzer as proposed combines x-ray lenses with highly dispersive crystal optics. It allows conversion of the x-ray energy spectrum into a spatial image with very high energy resolution. However, the presented theoretical analysis of the spectrograph did not take into account details of the scattered radiation source, i.e. sample, and its impact on the spectrograph performance. Using numerical simulations we investigated the influence of the finite sample thickness, the scattering angle andmore » the incident energy detuning on the analyzer image and the ultimate resolution.« less

Micromachined array tip for multifocus fiber-based optical coherence tomography.

PubMed

Yang, Victor X D; Munce, Nigel; Pekar, Julius; Gordon, Maggie L; Lo, Stewart; Marcon, Norman E; Wilson, Brian C; Vitkin, I Alex

2004-08-01

High-resolution optical coherence tomography demands a large detector bandwidth and a high numerical aperture for real-time imaging, which is difficult to achieve over a large imaging depth. To resolve these conflicting requirements we propose a novel multifocus fiber-based optical coherence tomography system with a micromachined array tip. We demonstrate the fabrication of a prototype four-channel tip that maintains a 9-14-microm spot diameter with more than 500 microm of imaging depth. Images of a resolution target and a human tooth were obtained with this tip by use of a four-channel cascaded Michelson fiber-optic interferometer, scanned simultaneously at 8 kHz with geometric power distribution across the four channels.

Is it really naked? On cosmic censorship in string theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Frolov, Andrei V.

We investigate the possibility of cosmic censorship violation in string theory using a characteristic double-null code, which penetrates horizons and is capable of resolving the spacetime all the way to the singularity. We perform high-resolution numerical simulations of the evolution of negative mass initial scalar field profiles, which were argued to provide a counterexample to cosmic censorship conjecture for AdS-asymptotic spacetimes in five-dimensional supergravity. In no instances formation of naked singularity is seen. Instead, numerical evidence indicates that black holes form in the collapse. Our results are consistent with earlier numerical studies, and explicitly show where the 'no black hole'more » argument breaks.« less

Mesoscale spiral vortex embedded within a Lake Michigan snow squall band - High resolution satellite observations and numerical model simulations

NASA Technical Reports Server (NTRS)

Lyons, Walter A.; Keen, Cecil S.; Hjelmfelt, Mark; Pease, Steven R.

1988-01-01

It is known that Great Lakes snow squall convection occurs in a variety of different modes depending on various factors such as air-water temperature contrast, boundary-layer wind shear, and geostrophic wind direction. An exceptional and often neglected source of data for mesoscale cloud studies is the ultrahigh resolution multispectral data produced by Landsat satellites. On October 19, 1972, a clearly defined spiral vortex was noted in a Landsat-1 image near the southern end of Lake Michigan during an exceptionally early cold air outbreak over a still very warm lake. In a numerical simulation using a three-dimensional Eulerian hydrostatic primitive equation mesoscale model with an initially uniform wind field, a definite analog to the observed vortex was generated. This suggests that intense surface heating can be a principal cause in the development of a low-level mesoscale vortex.

ULTRA-SHARP nonoscillatory convection schemes for high-speed steady multidimensional flow

NASA Technical Reports Server (NTRS)

Leonard, B. P.; Mokhtari, Simin

1990-01-01

For convection-dominated flows, classical second-order methods are notoriously oscillatory and often unstable. For this reason, many computational fluid dynamicists have adopted various forms of (inherently stable) first-order upwinding over the past few decades. Although it is now well known that first-order convection schemes suffer from serious inaccuracies attributable to artificial viscosity or numerical diffusion under high convection conditions, these methods continue to enjoy widespread popularity for numerical heat transfer calculations, apparently due to a perceived lack of viable high accuracy alternatives. But alternatives are available. For example, nonoscillatory methods used in gasdynamics, including currently popular TVD schemes, can be easily adapted to multidimensional incompressible flow and convective transport. This, in itself, would be a major advance for numerical convective heat transfer, for example. But, as is shown, second-order TVD schemes form only a small, overly restrictive, subclass of a much more universal, and extremely simple, nonoscillatory flux-limiting strategy which can be applied to convection schemes of arbitrarily high order accuracy, while requiring only a simple tridiagonal ADI line-solver, as used in the majority of general purpose iterative codes for incompressible flow and numerical heat transfer. The new universal limiter and associated solution procedures form the so-called ULTRA-SHARP alternative for high resolution nonoscillatory multidimensional steady state high speed convective modelling.

New, Improved Bulk-microphysical Schemes for Studying Precipitation Processes in WRF. Part 1; Comparisons with Other Schemes

NASA Technical Reports Server (NTRS)

Tao, W.-K.; Shi, J.; Chen, S. S> ; Lang, S.; Hong, S.-Y.; Thompson, G.; Peters-Lidard, C.; Hou, A.; Braun, S.;

Testing high resolution numerical models for analysis of contaminant storage and release from low permeability zones.

PubMed

Chapman, Steven W; Parker, Beth L; Sale, Tom C; Doner, Lee Ann

2012-08-01

It is now widely recognized that contaminant release from low permeability zones can sustain plumes long after primary sources are depleted, particularly for chlorinated solvents where regulatory limits are orders of magnitude below source concentrations. This has led to efforts to appropriately characterize sites and apply models for prediction incorporating these effects. A primary challenge is that diffusion processes are controlled by small-scale concentration gradients and capturing mass distribution in low permeability zones requires much higher resolution than commonly practiced. This paper explores validity of using numerical models (HydroGeoSphere, FEFLOW, MODFLOW/MT3DMS) in high resolution mode to simulate scenarios involving diffusion into and out of low permeability zones: 1) a laboratory tank study involving a continuous sand body with suspended clay layers which was 'loaded' with bromide and fluorescein (for visualization) tracers followed by clean water flushing, and 2) the two-layer analytical solution of Sale et al. (2008) involving a relatively simple scenario with an aquifer and underlying low permeability layer. All three models are shown to provide close agreement when adequate spatial and temporal discretization are applied to represent problem geometry, resolve flow fields and capture advective transport in the sands and diffusive transfer with low permeability layers and minimize numerical dispersion. The challenge for application at field sites then becomes appropriate site characterization to inform the models, capturing the style of the low permeability zone geometry and incorporating reasonable hydrogeologic parameters and estimates of source history, for scenario testing and more accurate prediction of plume response, leading to better site decision making. Copyright © 2012 Elsevier B.V. All rights reserved.

Protoplanetary Disks and Planet Formation a Computational Perspective

NASA Astrophysics Data System (ADS)

Backus, Isaac

In this thesis I present my research on the early stages of planet formation. Using advanced computational modeling techniques, I study global gas and gravitational dynamics in proto- planetary disks (PPDs) on length scales from the radius of Jupiter to the size of the solar system. In that environment, I investigate the formation of gas giants and the migration, enhancement, and distribution of small solids--the precursors to planetesimals and gas giant cores. I examine numerical techniques used in planet formation and PPD modeling, especially methods for generating initial conditions (ICs) in these unstable, chaotic systems. Disk simulation outcomes may depend strongly on ICs, which may explain results in the literature. I present the largest suite of high resolution PPD simulations to-date and argue that direct fragmentations of PPDs around M-Dwarfs is a plausible path to rapidly forming gas giants. I implement dust physics to track the migration of centimeter and smaller dust grains in very high resolution PPD simulations. While current dust methods are slow, with strict resolution and/or time-stepping requirements, and have some serious numerical issues, we can still demonstrate that dust does not concentrate at the pressure maxima of spiral arms, an indication that spiral features observed in the dust component are at least as well resolved in the gas. Additionally, coherent spiral arms do not limit dust settling. We suggest a novel mechanism for disk fragmentation at large radii driven by dust accretion from the surrounding nebula. We also investigate self induced dust traps, a mechanism which may help explain the growth of solids beyond meter sizes. We argue that current apparent demonstrations of this mechanism may be due to numerical artifacts and require further investigation.

Cover estimations using object-based image analysis rule sets developed across multiple scales in pinyon-juniper woodlands

USDA-ARS?s Scientific Manuscript database

Numerous studies have been conducted that evaluate the utility of remote sensing for monitoring and assessing vegetation and ground cover to support land management decisions and complement ground-measurements. However, few land cover comparisons have been made using high-resolution imagery and obj...

An intercomparison study of TSM, SEBS, and SEBAL using high-resolution imagery and lysimetric data

USDA-ARS?s Scientific Manuscript database

Over the past three decades, numerous remote sensing based ET mapping algorithms were developed. These algorithms provided a robust, economical, and efficient tool for ET estimations at field and regional scales. The Two Source Model (TSM), Surface Energy Balance System (SEBS), and Surface Energy Ba...

Investigations of possible contributions NDVI's have to misclassification in AVHRR data analysis

Treesearch

David L. Evans; Raymond L. Czaplewski

1996-01-01

Numerous subcontinental-scale projects have placed significant emphasis on the use of Normalized Difference Vegetation Indices (NDVI's) derived from Advanced Very High Resolution Radiometer (AVHRR) satellite data for vegetation type recognition. In multi-season AVHRR data, overlap of NDVI ranges for vegetation classes may degrade overall classification performance...

Statistical Properties of Differences between Low and High Resolution CMAQ Runs with Matched Initial and Boundary Conditions

EPA Science Inventory

The difficulty in assessing errors in numerical models of air quality is a major obstacle to improving their ability to predict and retrospectively map air quality. In this paper, using simulation outputs from the Community Multi-scale Air Quality Model (CMAQ), the statistic...

Use of artificial landscapes to isolate controls on burn probability

Treesearch

Marc-Andre Parisien; Carol Miller; Alan A. Ager; Mark A. Finney

2010-01-01

Techniques for modeling burn probability (BP) combine the stochastic components of fire regimes (ignitions and weather) with sophisticated fire growth algorithms to produce high-resolution spatial estimates of the relative likelihood of burning. Despite the numerous investigations of fire patterns from either observed or simulated sources, the specific influence of...

Monitoring the expanding distribution of non-indigenous dwarf eelgrass Zostera japonica in a Pacific Northwest USA estuary using high-resolution digital aerialphotomaps

EPA Science Inventory

The proliferation of non-indigenous species is a world-wide issue. Environmental managers need improved methods of detecting and monitoring the distribution of such invaders over large areas. In recent decades, numerous estuaries of the Pacific Northwest USA have experienced th...

Towards Forming a Primordial Protostar in a Cosmological AMR Simulation

NASA Astrophysics Data System (ADS)

Turk, Matthew J.; Abel, Tom; O'Shea, Brian W.

2008-03-01

Modeling the formation of the first stars in the universe is a well-posed problem and ideally suited for computational investigation.We have conducted high-resolution numerical studies of the formation of primordial stars. Beginning with primordial initial conditions appropriate for a ΛCDM model, we used the Eulerian adaptive mesh refinement code (Enzo) to achieve unprecedented numerical resolution, resolving cosmological scales as well as sub-stellar scales simultaneously. Building on the work of Abel, Bryan and Norman (2002), we followed the evolution of the first collapsing cloud until molecular hydrogen is optically thick to cooling radiation. In addition, the calculations account for the process of collision-induced emission (CIE) and add approximations to the optical depth in both molecular hydrogen roto-vibrational cooling and CIE. Also considered are the effects of chemical heating/cooling from the formation/destruction of molecular hydrogen. We present the results of these simulations, showing the formation of a 10 Jupiter-mass protostellar core bounded by a strongly aspherical accretion shock. Accretion rates are found to be as high as one solar mass per year.

The Sea Breeze in South-Iceland: Observations with an unmanned aircraft and numerical simulations

NASA Astrophysics Data System (ADS)

Opsanger Jonassen, Marius; Ólafsson, Haraldur; Rasol, Dubravka; Reuder, Joachim

2010-05-01

Sea breeze events, 19-20 July 2009, observed during the international field campaign MOSO, at the southcoast of Iceland, have been investigated using high resolution numerical simulations. Thanks to the use of a small unmanned aircraft system (UAS), SUMO, the wind and temperature aloft could be observed at a high resolution in both space and time. Simultaneously with the UAS operations, conventional platforms were used to obtain surface measurements. The observations show a distinct sea breeze circulation with an onset at around noon and a final decay around 19:00 UTC. At the maximum, the sea breeze layer reached a height of appr. 400 m, marked by a capping wind minimum. When compared to the flow aloft, the sea breeze layer was found to exhibit relatively low temperatures and an expected turn from an off-shore to an on-shore flow. Overall, the agreement between the observations and simulations are relatively good. The simulations suggest a horizontal extent of the circulation some 20-30 km off-shore, but only around 5 km on-shore.

Characterization of the geometry and topology of DNA pictured as a discrete collection of atoms

PubMed Central

Olson, Wilma K.

2014-01-01

The structural and physical properties of DNA are closely related to its geometry and topology. The classical mathematical treatment of DNA geometry and topology in terms of ideal smooth space curves was not designed to characterize the spatial arrangements of atoms found in high-resolution and simulated double-helical structures. We present here new and rigorous numerical methods for the rapid and accurate assessment of the geometry and topology of double-helical DNA structures in terms of the constituent atoms. These methods are well designed for large DNA datasets obtained in detailed numerical simulations or determined experimentally at high-resolution. We illustrate the usefulness of our methodology by applying it to the analysis of three canonical double-helical DNA chains, a 65-bp minicircle obtained in recent molecular dynamics simulations, and a crystallographic array of protein-bound DNA duplexes. Although we focus on fully base-paired DNA structures, our methods can be extended to treat the geometry and topology of melted DNA structures as well as to characterize the folding of arbitrary molecules such as RNA and cyclic peptides. PMID:24791158

Measurement and modeling of CO2 mass transfer in brine at reservoir conditions

NASA Astrophysics Data System (ADS)

Shi, Z.; Wen, B.; Hesse, M. A.; Tsotsis, T. T.; Jessen, K.

2018-03-01

In this work, we combine measurements and modeling to investigate the application of pressure-decay experiments towards delineation and interpretation of CO2 solubility, uptake and mass transfer in water/brine systems at elevated pressures of relevance to CO2 storage operations in saline aquifers. Accurate measurements and modeling of mass transfer in this context are crucial to an improved understanding of the longer-term fate of CO2 that is injected into the subsurface for storage purposes. Pressure-decay experiments are presented for CO2/water and CO2/brine systems with and without the presence of unconsolidated porous media. We demonstrate, via high-resolution numerical calculations in 2-D, that natural convection will complicate the interpretation of the experimental observations if the particle size is not sufficiently small. In such settings, we demonstrate that simple 1-D interpretations can result in an overestimation of the uptake (diffusivity) by two orders of magnitude. Furthermore, we demonstrate that high-resolution numerical calculations agree well with the experimental observations for settings where natural convection contributes substantially to the overall mass transfer process.

Numerical solution of special ultra-relativistic Euler equations using central upwind scheme

NASA Astrophysics Data System (ADS)

Ghaffar, Tayabia; Yousaf, Muhammad; Qamar, Shamsul

2018-06-01

This article is concerned with the numerical approximation of one and two-dimensional special ultra-relativistic Euler equations. The governing equations are coupled first-order nonlinear hyperbolic partial differential equations. These equations describe perfect fluid flow in terms of the particle density, the four-velocity and the pressure. A high-resolution shock-capturing central upwind scheme is employed to solve the model equations. To avoid excessive numerical diffusion, the considered scheme avails the specific information of local propagation speeds. By using Runge-Kutta time stepping method and MUSCL-type initial reconstruction, we have obtained 2nd order accuracy of the proposed scheme. After discussing the model equations and the numerical technique, several 1D and 2D test problems are investigated. For all the numerical test cases, our proposed scheme demonstrates very good agreement with the results obtained by well-established algorithms, even in the case of highly relativistic 2D test problems. For validation and comparison, the staggered central scheme and the kinetic flux-vector splitting (KFVS) method are also implemented to the same model. The robustness and efficiency of central upwind scheme is demonstrated by the numerical results.

High numerical aperture projection system for extreme ultraviolet projection lithography

DOEpatents

Hudyma, Russell M.

2000-01-01

An optical system is described that is compatible with extreme ultraviolet radiation and comprises five reflective elements for projecting a mask image onto a substrate. The five optical elements are characterized in order from object to image as concave, convex, concave, convex, and concave mirrors. The optical system is particularly suited for ring field, step and scan lithography methods. The invention uses aspheric mirrors to minimize static distortion and balance the static distortion across the ring field width which effectively minimizes dynamic distortion. The present invention allows for higher device density because the optical system has improved resolution that results from the high numerical aperture, which is at least 0.14.

Using kites for 3-D mapping of gullies at decimetre-resolution over several square kilometres: a case study on the Kamech catchment, Tunisia

NASA Astrophysics Data System (ADS)

Feurer, Denis; Planchon, Olivier; Amine El Maaoui, Mohamed; Ben Slimane, Abir; Rached Boussema, Mohamed; Pierrot-Deseilligny, Marc; Raclot, Damien

2018-06-01

Monitoring agricultural areas threatened by soil erosion often requires decimetre topographic information over areas of several square kilometres. Airborne lidar and remotely piloted aircraft system (RPAS) imagery have the ability to provide repeated decimetre-resolution and -accuracy digital elevation models (DEMs) covering these extents, which is unrealistic with ground surveys. However, various factors hamper the dissemination of these technologies in a wide range of situations, including local regulations for RPAS and the cost for airborne laser systems and medium-format RPAS imagery. The goal of this study is to investigate the ability of low-tech kite aerial photography to obtain DEMs with decimetre resolution and accuracy that permit 3-D descriptions of active gullying in cultivated areas of several square kilometres. To this end, we developed and assessed a two-step workflow. First, we used both heuristic experimental approaches in field and numerical simulations to determine the conditions that make a photogrammetric flight possible and effective over several square kilometres with a kite and a consumer-grade camera. Second, we mapped and characterised the entire gully system of a test catchment in 3-D. We showed numerically and experimentally that using a thin and light line for the kite is key for a complete 3-D coverage over several square kilometres. We thus obtained a decimetre-resolution DEM covering 3.18 km2 with a mean error and standard deviation of the error of +7 and 22 cm respectively, hence achieving decimetre accuracy. With this data set, we showed that high-resolution topographic data permit both the detection and characterisation of an entire gully system with a high level of detail and an overall accuracy of 74 % compared to an independent field survey. Kite aerial photography with simple but appropriate equipment is hence an alternative tool that has been proven to be valuable for surveying gullies with sub-metric details in a square-kilometre-scale catchment. This case study suggests that access to high-resolution topographic data on these scales can be given to the community, which may help facilitate a better understanding of gullying processes within a broader spectrum of conditions.

A multi-purpose readout electronics for CdTe and CZT detectors for x-ray imaging applications

NASA Astrophysics Data System (ADS)

Yue, X. B.; Deng, Z.; Xing, Y. X.; Liu, Y. N.

2017-09-01

A multi-purpose readout electronics based on the DPLMS digital filter has been developed for CdTe and CZT detectors for X-ray imaging applications. Different filter coefficients can be synthesized optimized either for high energy resolution at relatively low counting rate or for high rate photon-counting with reduced energy resolution. The effects of signal width constraints, sampling rate and length were numerical studied by Mento Carlo simulation with simple CRRC shaper input signals. The signal width constraint had minor effect and the ENC was only increased by 6.5% when the signal width was shortened down to 2 τc. The sampling rate and length depended on the characteristic time constants of both input and output signals. For simple CR-RC input signals, the minimum number of the filter coefficients was 12 with 10% increase in ENC when the output time constant was close to the input shaping time. A prototype readout electronics was developed for demonstration, using a previously designed analog front ASIC and a commercial ADC card. Two different DPLMS filters were successfully synthesized and applied for high resolution and high counting rate applications respectively. The readout electronics was also tested with a linear array CdTe detector. The energy resolutions of Am-241 59.5 keV peak were measured to be 6.41% in FWHM for the high resolution filter and to be 13.58% in FWHM for the high counting rate filter with 160 ns signal width constraint.

High resolution microphotonic needle for endoscopic imaging (Conference Presentation)

NASA Astrophysics Data System (ADS)

Tadayon, Mohammad Amin; Mohanty, Aseema; Roberts, Samantha P.; Barbosa, Felippe; Lipson, Michal

2017-02-01

GRIN (Graded index) lens have revolutionized micro endoscopy enabling deep tissue imaging with high resolution. The challenges of traditional GRIN lenses are their large size (when compared with the field of view) and their limited resolution. This is because of the relatively weak NA in standard graded index lenses. Here we introduce a novel micro-needle platform for endoscopy with much higher resolution than traditional GRIN lenses and a FOV that corresponds to the whole cross section of the needle. The platform is based on polymeric (SU-8) waveguide integrated with a microlens micro fabricated on a silicon substrate using a unique molding process. Due to the high index of refraction of the material the NA of the needle is much higher than traditional GRIN lenses. We tested the probe in a fluorescent dye solution (19.6 µM Alexa Flour 647 solution) and measured a numerical aperture of 0.25, focal length of about 175 µm and minimal spot size of about 1.6 µm. We show that the platform can image a sample with the field of view corresponding to the cross sectional area of the waveguide (80x100 µm2). The waveguide size can in principle be modified to vary size of the imaging field of view. This demonstration, combined with our previous work demonstrating our ability to implant the high NA needle in a live animal, shows that the proposed system can be used for deep tissue imaging with very high resolution and high field of view.

Trajectory Segmentation Map-Matching Approach for Large-Scale, High-Resolution GPS Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhu, Lei; Holden, Jacob R.; Gonder, Jeffrey D.

With the development of smartphones and portable GPS devices, large-scale, high-resolution GPS data can be collected. Map matching is a critical step in studying vehicle driving activity and recognizing network traffic conditions from the data. A new trajectory segmentation map-matching algorithm is proposed to deal accurately and efficiently with large-scale, high-resolution GPS trajectory data. The new algorithm separated the GPS trajectory into segments. It found the shortest path for each segment in a scientific manner and ultimately generated a best-matched path for the entire trajectory. The similarity of a trajectory segment and its matched path is described by a similaritymore » score system based on the longest common subsequence. The numerical experiment indicated that the proposed map-matching algorithm was very promising in relation to accuracy and computational efficiency. Large-scale data set applications verified that the proposed method is robust and capable of dealing with real-world, large-scale GPS data in a computationally efficient and accurate manner.« less

A cost-effective strategy for nonoscillatory convection without clipping

NASA Technical Reports Server (NTRS)

Leonard, B. P.; Niknafs, H. S.

1990-01-01

Clipping of narrow extrema and distortion of smooth profiles is a well known problem associated with so-called high resolution nonoscillatory convection schemes. A strategy is presented for accurately simulating highly convective flows containing discontinuities such as density fronts or shock waves, without distorting smooth profiles or clipping narrow local extrema. The convection algorithm is based on non-artificially diffusive third-order upwinding in smooth regions, with automatic adaptive stencil expansion to (in principle, arbitrarily) higher order upwinding locally, in regions of rapidly changing gradients. This is highly cost effective because the wider stencil is used only where needed-in isolated narrow regions. A recently developed universal limiter assures sharp monotonic resolution of discontinuities without introducing artificial diffusion or numerical compression. An adaptive discriminator is constructed to distinguish between spurious overshoots and physical peaks; this automatically relaxes the limiter near local turning points, thereby avoiding loss of resolution in narrow extrema. Examples are given for one-dimensional pure convection of scalar profiles at constant velocity.

Trajectory Segmentation Map-Matching Approach for Large-Scale, High-Resolution GPS Data

DOE PAGES

Zhu, Lei; Holden, Jacob R.; Gonder, Jeffrey D.

2017-01-01

With the development of smartphones and portable GPS devices, large-scale, high-resolution GPS data can be collected. Map matching is a critical step in studying vehicle driving activity and recognizing network traffic conditions from the data. A new trajectory segmentation map-matching algorithm is proposed to deal accurately and efficiently with large-scale, high-resolution GPS trajectory data. The new algorithm separated the GPS trajectory into segments. It found the shortest path for each segment in a scientific manner and ultimately generated a best-matched path for the entire trajectory. The similarity of a trajectory segment and its matched path is described by a similaritymore » score system based on the longest common subsequence. The numerical experiment indicated that the proposed map-matching algorithm was very promising in relation to accuracy and computational efficiency. Large-scale data set applications verified that the proposed method is robust and capable of dealing with real-world, large-scale GPS data in a computationally efficient and accurate manner.« less

High-resolution quantization based on soliton self-frequency shift and spectral compression in a bi-directional comb-fiber architecture

NASA Astrophysics Data System (ADS)

Zhang, Xuyan; Zhang, Zhiyao; Wang, Shubing; Liang, Dong; Li, Heping; Liu, Yong

2018-03-01

We propose and demonstrate an approach that can achieve high-resolution quantization by employing soliton self-frequency shift and spectral compression. Our approach is based on a bi-directional comb-fiber architecture which is composed of a Sagnac-loop-based mirror and a comb-like combination of N sections of interleaved single-mode fibers and high nonlinear fibers. The Sagnac-loop-based mirror placed at the terminal of a bus line reflects the optical pulses back to the bus line to achieve additional N-stage spectral compression, thus single-stage soliton self-frequency shift (SSFS) and (2 N - 1)-stage spectral compression are realized in the bi-directional scheme. The fiber length in the architecture is numerically optimized, and the proposed quantization scheme is evaluated by both simulation and experiment in the case of N = 2. In the experiment, a quantization resolution of 6.2 bits is obtained, which is 1.2-bit higher than that of its uni-directional counterpart.

High resolution regional climate simulation of the Hawaiian Islands - Validation of the historical run from 2003 to 2012

NASA Astrophysics Data System (ADS)

Xue, L.; Newman, A. J.; Ikeda, K.; Rasmussen, R.; Clark, M. P.; Monaghan, A. J.

2016-12-01

A high-resolution (a 1.5 km grid spacing domain nested within a 4.5 km grid spacing domain) 10-year regional climate simulation over the entire Hawaiian archipelago is being conducted at the National Center for Atmospheric Research (NCAR) using the Weather Research and Forecasting (WRF) model version 3.7.1. Numerical sensitivity simulations of the Hawaiian Rainband Project (HaRP, a filed experiment from July to August in 1990) showed that the simulated precipitation properties are sensitive to initial and lateral boundary conditions, sea surface temperature (SST), land surface models, vertical resolution and cloud droplet concentration. The validations of model simulated statistics of the trade wind inversion, temperature, wind field, cloud cover, and precipitation over the islands against various observations from soundings, satellites, weather stations and rain gauges during the period from 2003 to 2012 will be presented at the meeting.

Precise and fast spatial-frequency analysis using the iterative local Fourier transform.

PubMed

Lee, Sukmock; Choi, Heejoo; Kim, Dae Wook

2016-09-19

The use of the discrete Fourier transform has decreased since the introduction of the fast Fourier transform (fFT), which is a numerically efficient computing process. This paper presents the iterative local Fourier transform (ilFT), a set of new processing algorithms that iteratively apply the discrete Fourier transform within a local and optimal frequency domain. The new technique achieves 2¹⁰ times higher frequency resolution than the fFT within a comparable computation time. The method's superb computing efficiency, high resolution, spectrum zoom-in capability, and overall performance are evaluated and compared to other advanced high-resolution Fourier transform techniques, such as the fFT combined with several fitting methods. The effectiveness of the ilFT is demonstrated through the data analysis of a set of Talbot self-images (1280 × 1024 pixels) obtained with an experimental setup using grating in a diverging beam produced by a coherent point source.

Single objective light-sheet microscopy for high-speed whole-cell 3D super-resolution

DOE PAGES

Meddens, Marjolein B. M.; Liu, Sheng; Finnegan, Patrick S.; ...

2016-01-01

Here, we have developed a method for performing light-sheet microscopy with a single high numerical aperture lens by integrating reflective side walls into a microfluidic chip. These 45° side walls generate light-sheet illumination by reflecting a vertical light-sheet into the focal plane of the objective. Light-sheet illumination of cells loaded in the channels increases image quality in diffraction limited imaging via reduction of out-of-focus background light. Single molecule super-resolution is also improved by the decreased background resulting in better localization precision and decreased photo-bleaching, leading to more accepted localizations overall and higher quality images. Moreover, 2D and 3D single moleculemore » super-resolution data can be acquired faster by taking advantage of the increased illumination intensities as compared to wide field, in the focused light-sheet.« less

Remote sensing of atmospheric water vapor from synthetic aperture radar interferometry: case studies in Shanghai, China

NASA Astrophysics Data System (ADS)

Chang, Liang; Liu, Min; Guo, Lixin; He, Xiufeng; Gao, Guoping

2016-10-01

The estimation of atmospheric water vapor with high resolution is important for operational weather forecasting, climate monitoring, atmospheric research, and numerous other applications. The 40 m×40 m and 30 m×30 m differential precipitable water vapor (ΔPWV) maps are generated with C- and L-band synthetic aperture radar interferometry (InSAR) images over Shanghai, China, respectively. The ΔPWV maps are accessed via comparisons with the spatiotemporally synchronized PWV measurements from the European Centre for Medium-Range Weather Forecasts Interim reanalysis at the finest resolution and global positioning system observations, respectively. Results reveal that the ΔPWV maps can be estimated from both C- and L-band InSAR images with an accuracy of better than 2.0 mm, which, therefore, demonstrates the ability of InSAR observations at both C- and L-band to detect the water vapor distribution with high spatial resolution.

Direct Numerical Simulations of Small-Scale Gravity Wave Instability Dynamics in Variable Stratification and Shear

NASA Astrophysics Data System (ADS)

Mixa, T.; Fritts, D. C.; Laughman, B.; Wang, L.; Kantha, L. H.

2015-12-01

Multiple observations provide compelling evidence that gravity wave dissipation events often occur in multi-scale environments having highly-structured wind and stability profiles extending from the stable boundary layer into the mesosphere and lower thermosphere. Such events tend to be highly localized and thus yield local energy and momentum deposition and efficient secondary gravity wave generation expected to have strong influences at higher altitudes [e.g., Fritts et al., 2013; Baumgarten and Fritts, 2014]. Lidars, radars, and airglow imagers typically cannot achieve the spatial resolution needed to fully quantify these small-scale instability dynamics. Hence, we employ high-resolution modeling to explore these dynamics in representative environments. Specifically, we describe numerical studies of gravity wave packets impinging on a sheet of high stratification and shear and the resulting instabilities and impacts on the gravity wave amplitude and momentum flux for various flow and gravity wave parameters. References: Baumgarten, Gerd, and David C. Fritts (2014). Quantifying Kelvin-Helmholtz instability dynamics observed in noctilucent clouds: 1. Methods and observations. Journal of Geophysical Research: Atmospheres, 119.15, 9324-9337. Fritts, D. C., Wang, L., & Werne, J. A. (2013). Gravity wave-fine structure interactions. Part I: Influences of fine structure form and orientation on flow evolution and instability. Journal of the Atmospheric Sciences, 70(12), 3710-3734.

On the role of Sea Surface Temperature forcing in the numerical simulation of a Tropical-Like Cyclone event in the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Ricchi, Antonio; Marcello Miglietta, Mario; Barbariol, Francesco; Benetazzo, Alvise; Bonaldo, Davide; Falcieri, Francesco M.; Russo, Aniello; Sclavo, Mauro; Carniel, Sandro

2017-04-01

Between 19-22 January 2014 a baroclinic wave from the Atlantic region goes in cutoff over the Strait of Gibraltar. The resulting depression remains active for approximately 80 hours, passing off shore of the north African coast, crossing the Tyrrhenian Sea and the Adriatic Sea, before turning south. During the first phase (close to the Balearic islands) and when passing over the Adriatic, the depression assumes the characteristics of a TLC (Tropical Like Cyclones). Sea Surface Temperature (SST) is a very important factor for a proper numerical simulation of these events hence we chose to model this TLC event using the COAWST suite (Coupled Ocean Atmosphere Wave Sediment Transport Modelling System). In the first phase of our work we identified the best model configuration to reproduce the phenomenon, extensively testing different microphysics and PBL (Planetary Boundary Layer) schemes available in the numerical model WRF (Weather Research for Forecasting). In the second phase, in order to evaluate the impact of SST, we used the best physical set-up that reproduces the phenomenon in terms of intensity, trajectory and timing, using four different methods of implementation of the SST in the model: i)from a spectrum-radiometer at 8.3 km resolution and updated every six hours; ii) from a dataset provided by "MyOcean" at 1 km resolution and updated every 6 hours; iii) from COAWST suite run in coupled atmosphere-ocean configuration; iv) from COAWST suite in fully coupled atmosphere-ocean- wave configuration). Results show the importance of the selected microphysics scheme in order to correctly reproduce the TLC trajectory, and of the use of high-resolution and high-frequency SST fields, updated every hour in order to reproduce the diurnal cycles. Coupled numerical runs produce less intense heat fluxes which on turn result in better TLC trajectories, more realistic timing and intensity when compared with standalone simulations, even if the latter use a high resolution SST. Last, a temporary increase of the mixed layer depth along the trajectory of the TLC was exhibited by the fully coupled run during the two phases of maximum intensity of the phenomenon, when the wave field is more developed and acts more intensely on the vertical mixing. We will discuss how these results can be improved or further validated in proximity of land by using satellite information that will be available within the framework of H2020 CEASELESS project.

MUSE, the Multi-Slit Solar Explorer

NASA Astrophysics Data System (ADS)

Lemen, J. R.; Tarbell, T. D.; De Pontieu, B.; Wuelser, J. P.

2017-12-01

The Multi-Slit Solar Explorer (MUSE) has been selected for a Phase A study for the NASA Heliophysics Small Explorer program. The science objective of MUSE is to make high spatial and temporal resolution imaging and spectral observations of the solar corona and transition region in order to probe the mechanisms responsible for energy release in the corona and understand the dynamics of the solar atmosphere. The physical processes are responsible for heating the corona, accelerating the solar wind, and the rapid release of energy in CMEs and flares. The observations will be tightly coupled to state-of-the-art numerical modeling to provide significantly improved estimates for understanding and anticipating space weather. MUSE contains two instruments: an EUV spectrograph and an EUV context imager. Both have similar spatial resolutions and leverage extensive heritage from previous high-resolution instruments such as IRIS and the HiC rocket payload. The MUSE spectrograph employs a novel multi-slit design that enables a 100x improvement in spectral scanning rates, which will reveal crucial information about the dynamics (e.g., temperature, velocities) of the physical processes that are not observable with current instruments. The MUSE investigation builds on the success of IRIS by combining numerical modeling with a uniquely capable observatory: MUSE will obtain EUV spectra and images with the highest resolution in space (1/3 arcsec) and time (1-4 s) ever achieved for the transition region and corona, along 35 slits and a large context FOV simultaneously. The MUSE consortium includes LMSAL, SAO, Stanford, ARC, HAO, GSFC, MSFC, MSU, and ITA Oslo.

Design and analysis of a fast, two-mirror soft-x-ray microscope

NASA Technical Reports Server (NTRS)

Shealy, D. L.; Wang, C.; Jiang, W.; Jin, L.; Hoover, R. B.

1992-01-01

During the past several years, a number of investigators have addressed the design, analysis, fabrication, and testing of spherical Schwarzschild microscopes for soft-x-ray applications using multilayer coatings. Some of these systems have demonstrated diffraction limited resolution for small numerical apertures. Rigorously aplanatic, two-aspherical mirror Head microscopes can provide near diffraction limited resolution for very large numerical apertures. The relationships between the numerical aperture, mirror radii and diameters, magnifications, and total system length for Schwarzschild microscope configurations are summarized. Also, an analysis of the characteristics of the Head-Schwarzschild surfaces will be reported. The numerical surface data predicted by the Head equations were fit by a variety of functions and analyzed by conventional optical design codes. Efforts have been made to determine whether current optical substrate and multilayer coating technologies will permit construction of a very fast Head microscope which can provide resolution approaching that of the wavelength of the incident radiation.

The robustness of T2 value as a trabecular structural index at multiple spatial resolutions of 7 Tesla MRI.

PubMed

Lee, D K; Song, Y K; Park, B W; Cho, H P; Yeom, J S; Cho, G; Cho, H

2018-04-15

To evaluate the robustness of MR transverse relaxation times of trabecular bone from spin-echo and gradient-echo acquisitions at multiple spatial resolutions of 7 T. The effects of MRI resolutions to T 2 and T2* of trabecular bone were numerically evaluated by Monte Carlo simulations. T 2 , T2*, and trabecular structural indices from multislice multi-echo and UTE acquisitions were measured in defatted human distal femoral condyles on a 7 T scanner. Reference structural indices were extracted from high-resolution microcomputed tomography images. For bovine knee trabecular samples with intact bone marrow, T 2 and T2* were measured by degrading spatial resolutions on a 7 T system. In the defatted trabecular experiment, both T 2 and T2* values showed strong ( |r| > 0.80) correlations with trabecular spacing and number, at a high spatial resolution of 125 µm 3 . The correlations for MR image-segmentation-derived structural indices were significantly degraded ( |r| < 0.50) at spatial resolutions of 250 and 500 µm 3 . The correlations for T2* rapidly dropped ( |r| < 0.50) at a spatial resolution of 500 µm 3 , whereas those for T 2 remained consistently high ( |r| > 0.85). In the bovine trabecular experiments with intact marrow, low-resolution (approximately 1 mm 3 , 2 minutes) T 2 values did not shorten ( |r| > 0.95 with respect to approximately 0.4 mm 3 , 11 minutes) and maintained consistent correlations ( |r| > 0.70) with respect to trabecular spacing (turbo spin echo, 22.5 minutes). T 2 measurements of trabeculae at 7 T are robust with degrading spatial resolution and may be preferable in assessing trabecular spacing index with reduced scan time, when high-resolution 3D micro-MRI is difficult to obtain. © 2018 International Society for Magnetic Resonance in Medicine.

Quantifying Dynamic Changes on Surface of Comet 67P/Churyumov-Gerasimenko Using High-Resolution Photoclinometry DTMs

NASA Astrophysics Data System (ADS)

Tang, Y.; Birch, S.; Hayes, A.; Kirk, R. L.; Kutsop, N. W. S.; Squyres, S. W.

2017-12-01

Observations from ESA's Rosetta spacecraft of comet 67P/Churyumov-Gerasimenko (67P) have provided insights into the geological processes that act to modify the surface of a small, primitive body. The landscapes of 67P are shaped by both large scale violent changes, such as cliff collapses and jet events, as well as smaller and more subtle changes such as the formation of pits and ripples within the larger-scale granular deposits. Explosive jets are located through triangulating the same jet in multiple images. They appear to originate from locations close to numerous newly formed, small-scale pits, which were only observed after known jet events (for example, the jet observed on March 11th, 2015, in image N20150311T053737597ID30F22). This implies a possible link between these two dynamical processes. We generated high-resolution photoclinometric digital terrain models (DTM) of the surface of 67P (at 1.5m/pixel) in locations where recent jet events were observed and over surfaces where newly formed pits are observed. A comparison of DTMs generated of the surface both before and after the appearance of the pits provides insight to the magnitude of dynamical changes, including the volume of the ejected material. By tracking the change in the surface topography at such high resolution, we constrain both the volume of materials that are ejected from the surface during the jet event, and of materials that are retained in nearby deposits. By studying these events and their aftermath, it will be possible to formulate numerical models as to the formation of the jets and explain why and how they occur. We will use this information in conjunction with numerical modeling of the large-scale global transport of sedimentary materials on 67P, to facilitate a better understanding of cometary landscape evolution.

A numerical resolution study of high order essentially non-oscillatory schemes applied to incompressible flow

NASA Technical Reports Server (NTRS)

Weinan, E.; Shu, Chi-Wang

1994-01-01

High order essentially non-oscillatory (ENO) schemes, originally designed for compressible flow and in general for hyperbolic conservation laws, are applied to incompressible Euler and Navier-Stokes equations with periodic boundary conditions. The projection to divergence-free velocity fields is achieved by fourth-order central differences through fast Fourier transforms (FFT) and a mild high-order filtering. The objective of this work is to assess the resolution of ENO schemes for large scale features of the flow when a coarse grid is used and small scale features of the flow, such as shears and roll-ups, are not fully resolved. It is found that high-order ENO schemes remain stable under such situations and quantities related to large scale features, such as the total circulation around the roll-up region, are adequately resolved.

A numerical resolution study of high order essentially non-oscillatory schemes applied to incompressible flow

NASA Technical Reports Server (NTRS)

Weinan, E.; Shu, Chi-Wang

1992-01-01

High order essentially non-oscillatory (ENO) schemes, originally designed for compressible flow and in general for hyperbolic conservation laws, are applied to incompressible Euler and Navier-Stokes equations with periodic boundary conditions. The projection to divergence-free velocity fields is achieved by fourth order central differences through Fast Fourier Transforms (FFT) and a mild high-order filtering. The objective of this work is to assess the resolution of ENO schemes for large scale features of the flow when a coarse grid is used and small scale features of the flow, such as shears and roll-ups, are not fully resolved. It is found that high-order ENO schemes remain stable under such situations and quantities related to large-scale features, such as the total circulation around the roll-up region, are adequately resolved.

Comparison of High-Order and Low-Order Methods for Large-Eddy Simulation of a Compressible Shear Layer

NASA Technical Reports Server (NTRS)

Mankbadi, M. R.; Georgiadis, N. J.; DeBonis, J. R.

2015-01-01

The objective of this work is to compare a high-order solver with a low-order solver for performing large-eddy simulations (LES) of a compressible mixing layer. The high-order method is the Wave-Resolving LES (WRLES) solver employing a Dispersion Relation Preserving (DRP) scheme. The low-order solver is the Wind-US code, which employs the second-order Roe Physical scheme. Both solvers are used to perform LES of the turbulent mixing between two supersonic streams at a convective Mach number of 0.46. The high-order and low-order methods are evaluated at two different levels of grid resolution. For a fine grid resolution, the low-order method produces a very similar solution to the high-order method. At this fine resolution the effects of numerical scheme, subgrid scale modeling, and filtering were found to be negligible. Both methods predict turbulent stresses that are in reasonable agreement with experimental data. However, when the grid resolution is coarsened, the difference between the two solvers becomes apparent. The low-order method deviates from experimental results when the resolution is no longer adequate. The high-order DRP solution shows minimal grid dependence. The effects of subgrid scale modeling and spatial filtering were found to be negligible at both resolutions. For the high-order solver on the fine mesh, a parametric study of the spanwise width was conducted to determine its effect on solution accuracy. An insufficient spanwise width was found to impose an artificial spanwise mode and limit the resolved spanwise modes. We estimate that the spanwise depth needs to be 2.5 times larger than the largest coherent structures to capture the largest spanwise mode and accurately predict turbulent mixing.

Optical frequency comb Fourier transform spectroscopy with sub-nominal resolution and precision beyond the Voigt profile

NASA Astrophysics Data System (ADS)

Rutkowski, Lucile; Masłowski, Piotr; Johansson, Alexandra C.; Khodabakhsh, Amir; Foltynowicz, Aleksandra

2018-01-01

Broadband precision spectroscopy is indispensable for providing high fidelity molecular parameters for spectroscopic databases. We have recently shown that mechanical Fourier transform spectrometers based on optical frequency combs can measure broadband high-resolution molecular spectra undistorted by the instrumental line shape (ILS) and with a highly precise frequency scale provided by the comb. The accurate measurement of the power of the comb modes interacting with the molecular sample was achieved by acquiring single-burst interferograms with nominal resolution matched to the comb mode spacing. Here we describe in detail the experimental and numerical steps needed to achieve sub-nominal resolution and retrieve ILS-free molecular spectra, i.e. with ILS-induced distortion below the noise level. We investigate the accuracy of the transition line centers retrieved by fitting to the absorption lines measured using this method. We verify the performance by measuring an ILS-free cavity-enhanced low-pressure spectrum of the 3ν1 + ν3 band of CO2 around 1575 nm with line widths narrower than the nominal resolution. We observe and quantify collisional narrowing of absorption line shape, for the first time with a comb-based spectroscopic technique. Thus retrieval of line shape parameters with accuracy not limited by the Voigt profile is now possible for entire absorption bands acquired simultaneously.

Resolution and contrast in Kelvin probe force microscopy

NASA Astrophysics Data System (ADS)

Jacobs, H. O.; Leuchtmann, P.; Homan, O. J.; Stemmer, A.

1998-08-01

The combination of atomic force microscopy and Kelvin probe technology is a powerful tool to obtain high-resolution maps of the surface potential distribution on conducting and nonconducting samples. However, resolution and contrast transfer of this method have not been fully understood, so far. To obtain a better quantitative understanding, we introduce a model which correlates the measured potential with the actual surface potential distribution, and we compare numerical simulations of the three-dimensional tip-specimen model with experimental data from test structures. The observed potential is a locally weighted average over all potentials present on the sample surface. The model allows us to calculate these weighting factors and, furthermore, leads to the conclusion that good resolution in potential maps is obtained by long and slender but slightly blunt tips on cantilevers of minimal width and surface area.

UN resolution on the prevention and control of non-communicable diseases: an opportunity for global action.

PubMed

Mamudu, Hadii M; Yang, Joshua S; Novotny, Thomas E

2011-01-01

In May 2010, the United Nations (UN) General Assembly unanimously adopted a resolution on non-communicable diseases (NCDs) that called for high-level meetings to address the global burden of NCDs. This paper highlights the growing global burden of NCDs (cardiovascular diseases, cancer, chronic obstructive pulmonary diseases and diabetes), provides a brief historical background on the adoption of the UN NCDs resolution and argues that the resolution provides a remarkable new opportunity for improved international collaboration to address NCDs. Additionally, the paper argues that while the existing World Health Organisation programme on NCDs be continued and expanded, the UN can provide the expanded political leadership that is necessary for multi-sectoral collaboration and can serve as a respected forum for dealing with the issue across numerous key UN agencies.

A ``Cyber Wind Facility'' for HPC Wind Turbine Field Experiments

NASA Astrophysics Data System (ADS)

Brasseur, James; Paterson, Eric; Schmitz, Sven; Campbell, Robert; Vijayakumar, Ganesh; Lavely, Adam; Jayaraman, Balaji; Nandi, Tarak; Jha, Pankaj; Dunbar, Alex; Motta-Mena, Javier; Craven, Brent; Haupt, Sue

2013-03-01

The Penn State ``Cyber Wind Facility'' (CWF) is a high-fidelity multi-scale high performance computing (HPC) environment in which ``cyber field experiments'' are designed and ``cyber data'' collected from wind turbines operating within the atmospheric boundary layer (ABL) environment. Conceptually the ``facility'' is akin to a high-tech wind tunnel with controlled physical environment, but unlike a wind tunnel it replicates commercial-scale wind turbines operating in the field and forced by true atmospheric turbulence with controlled stability state. The CWF is created from state-of-the-art high-accuracy technology geometry and grid design and numerical methods, and with high-resolution simulation strategies that blend unsteady RANS near the surface with high fidelity large-eddy simulation (LES) in separated boundary layer, blade and rotor wake regions, embedded within high-resolution LES of the ABL. CWF experiments complement physical field facility experiments that can capture wider ranges of meteorological events, but with minimal control over the environment and with very small numbers of sensors at low spatial resolution. I shall report on the first CWF experiments aimed at dynamical interactions between ABL turbulence and space-time wind turbine loadings. Supported by DOE and NSF.

A high-resolution synthetic bed elevation grid of the Antarctic continent

NASA Astrophysics Data System (ADS)

Graham, Felicity S.; Roberts, Jason L.; Galton-Fenzi, Ben K.; Young, Duncan; Blankenship, Donald; Siegert, Martin J.

2017-05-01

Digital elevation models of Antarctic bed topography are smoothed and interpolated onto low-resolution ( > 1 km) grids as current observed topography data are generally sparsely and unevenly sampled. This issue has potential implications for numerical simulations of ice-sheet dynamics, especially in regions prone to instability where detailed knowledge of the topography, including fine-scale roughness, is required. Here, we present a high-resolution (100 m) synthetic bed elevation terrain for Antarctica, encompassing the continent, continental shelf, and seas south of 60° S. Although not identically matching observations, the synthetic bed surface - denoted as HRES - preserves topographic roughness characteristics of airborne and ground-based ice-penetrating radar data measured by the ICECAP (Investigating the Cryospheric Evolution of the Central Antarctic Plate) consortium or used to create the Bedmap1 compilation. Broad-scale ( > 5 km resolution) features of the Antarctic landscape are incorporated using a low-pass filter of the Bedmap2 bed elevation data. HRES has applicability in high-resolution ice-sheet modelling studies, including investigations of the interaction between topography, ice-sheet dynamics, and hydrology, where processes are highly sensitive to bed elevations and fine-scale roughness. The data are available for download from the Australian Antarctic Data Centre (doi:10.4225/15/57464ADE22F50).

Common-path digital holographic microscopy based on a beam displacer unit

NASA Astrophysics Data System (ADS)

Di, Jianglei; Zhang, Jiwei; Song, Yu; Wang, Kaiqiang; Wei, Kun; Zhao, Jianlin

2018-02-01

Digital holographic microscopy (DHM) has become a novel tool with advantages of full field, non-destructive, high-resolution and 3D imaging, which captures the quantitative amplitude and phase information of microscopic specimens. It's a well-established method for digital recording and numerical reconstructing the full complex field of wavefront of the samples with a diffraction-limited lateral resolution down to 0.3 μm depending on the numerical aperture of microscope objective. Meanwhile, its axial resolution through axial direction is less than 10 nm due to the interferometric nature in phase imaging. Compared with the typical optical configurations such as Mach-Zehnder interferometer and Michelson interferometer, the common-path DHM has the advantages of simple and compact configuration, high stability, and so on. Here, a simple, compact, and low-cost common-path DHM based on a beam displacer unit is proposed for quantitative phase imaging of biological cells. The beam displacer unit is completely compatible with commercial microscope and can be easily set up in the output port of the microscope as a compact independent device. This technique can be used to achieve the quantitative phase measurement of biological cells with an excellent temporal stability of 0.51 nm, which makes it having a good prospect in the fields of biological and medical science. Living mouse osteoblastic cells are quantitatively measured with the system to demonstrate its capability and applicability.

Hydrostatic Pressure Sensing with High Birefringence Photonic Crystal Fibers

PubMed Central

Fávero, Fernando C.; Quintero, Sully M. M.; Martelli, Cicero; Braga, Arthur M.B.; Silva, Vinícius V.; Carvalho, Isabel C. S.; Llerena, Roberth W. A.; Valente, Luiz C. G.

2010-01-01

The effect of hydrostatic pressure on the waveguiding properties of high birefringence photonic crystal fibers (HiBi PCF) is evaluated both numerically and experimentally. A fiber design presenting form birefringence induced by two enlarged holes in the innermost ring defining the fiber core is investigated. Numerical results show that modal sensitivity to the applied pressure depends on the diameters of the holes, and can be tailored by independently varying the sizes of the large or small holes. Numerical and experimental results are compared showing excellent agreement. A hydrostatic pressure sensor is proposed and demonstrated using an in-fiber modal interferometer where the two orthogonally polarized modes of a HiBi PCF generate fringes over the optical spectrum of a broad band source. From the analysis of experimental results, it is concluded that, in principle, an operating limit of 92 MPa in pressure could be achieved with 0.0003% of full scale resolution. PMID:22163435

Debris flow initiation by runoff in a recently burned basin: Is grain-by-grain sediment bulking or en masse failure to blame?

NASA Astrophysics Data System (ADS)

McGuire, Luke A.; Rengers, Francis K.; Kean, Jason W.; Staley, Dennis M.

2017-07-01

Postwildfire debris flows are frequently triggered by runoff following high-intensity rainfall, but the physical mechanisms by which water-dominated flows transition to debris flows are poorly understood relative to debris flow initiation from shallow landslides. In this study, we combined a numerical model with high-resolution hydrologic and geomorphic data sets to test two different hypotheses for debris flow initiation during a rainfall event that produced numerous debris flows within a recently burned drainage basin. Based on simulations, large volumes of sediment eroded from the hillslopes were redeposited within the channel network throughout the storm, leading to the initiation of numerous debris flows as a result of the mass failure of sediment dams that built up within the channel. More generally, results provide a quantitative framework for assessing the potential of runoff-generated debris flows based on sediment supply and hydrologic conditions.

Debris flow initiation by runoff in a recently burned basin: Is grain-by-grain sediment bulking or en masse failure to blame?

USGS Publications Warehouse

McGuire, Luke; Rengers, Francis K.; Kean, Jason W.; Staley, Dennis M.

2017-01-01

Postwildfire debris flows are frequently triggered by runoff following high-intensity rainfall, but the physical mechanisms by which water-dominated flows transition to debris flows are poorly understood relative to debris flow initiation from shallow landslides. In this study, we combined a numerical model with high-resolution hydrologic and geomorphic data sets to test two different hypotheses for debris flow initiation during a rainfall event that produced numerous debris flows within a recently burned drainage basin. Based on simulations, large volumes of sediment eroded from the hillslopes were redeposited within the channel network throughout the storm, leading to the initiation of numerous debris flows as a result of the mass failure of sediment dams that built up within the channel. More generally, results provide a quantitative framework for assessing the potential of runoff-generated debris flows based on sediment supply and hydrologic conditions.

Three-dimensional holographic optical manipulation through a high-numerical-aperture soft-glass multimode fibre

NASA Astrophysics Data System (ADS)

Leite, Ivo T.; Turtaev, Sergey; Jiang, Xin; Šiler, Martin; Cuschieri, Alfred; Russell, Philip St. J.; Čižmár, Tomáš

2018-01-01

Holographic optical tweezers (HOT) hold great promise for many applications in biophotonics, allowing the creation and measurement of minuscule forces on biomolecules, molecular motors and cells. Geometries used in HOT currently rely on bulk optics, and their exploitation in vivo is compromised by the optically turbid nature of tissues. We present an alternative HOT approach in which multiple three-dimensional (3D) traps are introduced through a high-numerical-aperture multimode optical fibre, thus enabling an equally versatile means of manipulation through channels having cross-section comparable to the size of a single cell. Our work demonstrates real-time manipulation of 3D arrangements of micro-objects, as well as manipulation inside otherwise inaccessible cavities. We show that the traps can be formed over fibre lengths exceeding 100 mm and positioned with nanometric resolution. The results provide the basis for holographic manipulation and other high-numerical-aperture techniques, including advanced microscopy, through single-core-fibre endoscopes deep inside living tissues and other complex environments.

Toward self-consistent tectono-magmatic numerical model of rift-to-ridge transition

NASA Astrophysics Data System (ADS)

Gerya, Taras; Bercovici, David; Liao, Jie

2017-04-01

Natural data from modern and ancient lithospheric extension systems suggest three-dimensional (3D) character of deformation and complex relationship between magmatism and tectonics during the entire rift-to-ridge transition. Therefore, self-consistent high-resolution 3D magmatic-thermomechanical numerical approaches stand as a minimum complexity requirement for modeling and understanding of this transition. Here we present results from our new high-resolution 3D finite-difference marker-in-cell rift-to-ridge models, which account for magmatic accretion of the crust and use non-linear strain-weakened visco-plastic rheology of rocks that couples brittle/plastic failure and ductile damage caused by grain size reduction. Numerical experiments suggest that nucleation of rifting and ridge-transform patterns are decoupled in both space and time. At intermediate stages, two patterns can coexist and interact, which triggers development of detachment faults, failed rift arms, hyper-extended margins and oblique proto-transforms. En echelon rift patterns typically develop in the brittle upper-middle crust whereas proto-ridge and proto-transform structures nucleate in the lithospheric mantle. These deep proto-structures propagate upward, inter-connect and rotate toward a mature orthogonal ridge-transform patterns on the timescale of millions years during incipient thermal-magmatic accretion of the new oceanic-like lithosphere. Ductile damage of the extending lithospheric mantle caused by grain size reduction assisted by Zenner pinning plays critical role in rift-to-ridge transition by stabilizing detachment faults and transform structures. Numerical results compare well with observations from incipient spreading regions and passive continental margins.

An investigation of the convective region of numerically simulated squall lines

NASA Astrophysics Data System (ADS)

Bryan, George Howard

High resolution numerical simulations are utilized to investigate the thermodynamic and kinematic structure of the convective region of squall lines. A new numerical modeling system was developed for this purpose. The model incorporates several new and/or recent advances in numerical modeling, including: a mass- and energy-conserving equation set, based on the compressible system of equations; third-order Runge-Kutta time integration, with high (third to sixth) order spatial discretization; and a new method for conserved-variable mixing in saturated environments, utilizing an exact definition for ice-liquid water potential temperature. A benchmark simulation for moist environments was designed to evaluate the new model. It was found that the mass- and energy-conserving equation set was necessary to produce acceptable results, and that traditional equation sets have a cool bias that leads to systematic underprediction of vertical velocity. The model was developed to run on massively-parallel distributed memory computing systems. This allows for simulations with very high resolution. In this study, squall lines were simulated with grid spacing of 125 m over a 300 km x 60 km x 18 km domain. Results show that the 125 m simulations contain sub-cloud-scale turbulent eddies that stretch and distort plumes of high equivalent potential temperature (thetae) that rise from the pre-squall-line boundary layer. In contrast, with 1 km grid spacing the high thetae plumes rise in a laminar manner, and require parameterized subgrid terms to diffuse the high theta e air. The high resolution output is used to refine the conceptual model of the structure and lifecycle of moist absolutely unstable layers (MAULs). Moist absolute instability forms in the inflow region of the squall line and is subsequently removed by turbulent processes of varying scales. Three general MAUL regimes (MRs) are identified: a laminar MR, characterized by deep (˜2 km) MAULs that extend continuously in both the cross-line and along-line directions; a convective MR, containing deep (˜10 km) cellular pulses and plumes; and a turbulent MR, characterized by numerous moist turbulent eddies that are a few km (or smaller) in scale. The character of the laminar MR is of particular interest. Parcels in this region experience moist absolute instability for 11--17 minutes before beginning to overturn. Conventional theory suggests that overturning would ensue immediately in these conditions. Two explanations are offered to elucidate why this layer persists without overturning. First, it is found that buoyancy forcing (defined as the sum of buoyancy and the vertical pressure gradient due to the buoyancy field) is reduced in the laminar MR as compared to that of an isolated parcel. The geometry of the laminar MR is directly responsible for this reduction in buoyancy forcing; specifically, the MAUL extends continuously in the along-line direction and for 10 km in the cross-line direction, which inhibits the development of vertical motions due to mass continuity considerations. (Abstract shortened by UMI.)

Integration of Local Observations into the One Dimensional Fog Model PAFOG

NASA Astrophysics Data System (ADS)

Thoma, Christina; Schneider, Werner; Masbou, Matthieu; Bott, Andreas

2012-05-01

The numerical prediction of fog requires a very high vertical resolution of the atmosphere. Owing to a prohibitive computational effort of high resolution three dimensional models, operational fog forecast is usually done by means of one dimensional fog models. An important condition for a successful fog forecast with one dimensional models consists of the proper integration of observational data into the numerical simulations. The goal of the present study is to introduce new methods for the consideration of these data in the one dimensional radiation fog model PAFOG. First, it will be shown how PAFOG may be initialized with observed visibilities. Second, a nudging scheme will be presented for the inclusion of measured temperature and humidity profiles in the PAFOG simulations. The new features of PAFOG have been tested by comparing the model results with observations of the German Meteorological Service. A case study will be presented that reveals the importance of including local observations in the model calculations. Numerical results obtained with the modified PAFOG model show a distinct improvement of fog forecasts regarding the times of fog formation, dissipation as well as the vertical extent of the investigated fog events. However, model results also reveal that a further improvement of PAFOG might be possible if several empirical model parameters are optimized. This tuning can only be realized by comprehensive comparisons of model simulations with corresponding fog observations.

Weighted Non-linear Compact Schemes for the Direct Numerical Simulation of Compressible, Turbulent Flows

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ghosh, Debojyoti; Baeder, James D.

2014-01-21

A new class of compact-reconstruction weighted essentially non-oscillatory (CRWENO) schemes were introduced (Ghosh and Baeder in SIAM J Sci Comput 34(3): A1678–A1706, 2012) with high spectral resolution and essentially non-oscillatory behavior across discontinuities. The CRWENO schemes use solution-dependent weights to combine lower-order compact interpolation schemes and yield a high-order compact scheme for smooth solutions and a non-oscillatory compact scheme near discontinuities. The new schemes result in lower absolute errors, and improved resolution of discontinuities and smaller length scales, compared to the weighted essentially non-oscillatory (WENO) scheme of the same order of convergence. Several improvements to the smoothness-dependent weights, proposed inmore » the literature in the context of the WENO schemes, address the drawbacks of the original formulation. This paper explores these improvements in the context of the CRWENO schemes and compares the different formulations of the non-linear weights for flow problems with small length scales as well as discontinuities. Simplified one- and two-dimensional inviscid flow problems are solved to demonstrate the numerical properties of the CRWENO schemes and its different formulations. Canonical turbulent flow problems—the decay of isotropic turbulence and the shock-turbulence interaction—are solved to assess the performance of the schemes for the direct numerical simulation of compressible, turbulent flows« less

Spatial coherence effect on layer thickness determination in narrowband full-field optical coherence tomography.

PubMed

Safrani, Avner; Abdulhalim, Ibrahim

2011-06-20

Longitudinal spatial coherence (LSC) is determined by the spatial frequency content of an optical beam. The use of lenses with a high numerical aperture (NA) in full-field optical coherence tomography and a narrowband light source makes the LSC length much shorter than the temporal coherence length, hence suggesting that high-resolution 3D images of biological and multilayered samples can be obtained based on the low LSC. A simplified model is derived, supported by experimental results, which describes the expected interference output signal of multilayered samples when high-NA lenses are used together with a narrowband light source. An expression for the correction factor for the layer thickness determination is found valid for high-NA objectives. Additionally, the method was applied to a strongly scattering layer, demonstrating the potential of this method for high-resolution imaging of scattering media.

Evaluation of Tsunami Run-Up on Coastal Areas at Regional Scale

NASA Astrophysics Data System (ADS)

González, M.; Aniel-Quiroga, Í.; Gutiérrez, O.

2017-12-01

Tsunami hazard assessment is tackled by means of numerical simulations, giving as a result, the areas flooded by tsunami wave inland. To get this, some input data is required, i.e., the high resolution topobathymetry of the study area, the earthquake focal mechanism parameters, etc. The computational cost of these kinds of simulations are still excessive. An important restriction for the elaboration of large scale maps at National or regional scale is the reconstruction of high resolution topobathymetry on the coastal zone. An alternative and traditional method consists of the application of empirical-analytical formulations to calculate run-up at several coastal profiles (i.e. Synolakis, 1987), combined with numerical simulations offshore without including coastal inundation. In this case, the numerical simulations are faster but some limitations are added as the coastal bathymetric profiles are very simply idealized. In this work, we present a complementary methodology based on a hybrid numerical model, formed by 2 models that were coupled ad hoc for this work: a non-linear shallow water equations model (NLSWE) for the offshore part of the propagation and a Volume of Fluid model (VOF) for the areas near the coast and inland, applying each numerical scheme where they better reproduce the tsunami wave. The run-up of a tsunami scenario is obtained by applying the coupled model to an ad-hoc numerical flume. To design this methodology, hundreds of worldwide topobathymetric profiles have been parameterized, using 5 parameters (2 depths and 3 slopes). In addition, tsunami waves have been also parameterized by their height and period. As an application of the numerical flume methodology, the coastal parameterized profiles and tsunami waves have been combined to build a populated database of run-up calculations. The combination was tackled by means of numerical simulations in the numerical flume The result is a tsunami run-up database that considers real profiles shape, realistic tsunami waves, and optimized numerical simulations. This database allows the calculation of the run-up of any new tsunami wave by interpolation on the database, in a short period of time, based on the tsunami wave characteristics provided as an output of the NLSWE model along the coast at a large scale domain (regional or National scale).

Examining the Impacts of High-Resolution Land Surface Initialization on Model Predictions of Convection in the Southeastern U.S.

NASA Technical Reports Server (NTRS)

Case, Jonathan L.; Kumar, Sujay V.; Santos, Pablo; Medlin, Jeffrey M.; Jedlovec, Gary J.

2009-01-01

One of the most challenging weather forecast problems in the southeastern U.S. is daily summertime pulse convection. During the summer, atmospheric flow and forcing are generally weak in this region; thus, convection typically initiates in response to local forcing along sea/lake breezes, and other discontinuities often related to horizontal gradients in surface heating rates. Numerical simulations of pulse convection usually have low skill, even in local predictions at high resolution, due to the inherent chaotic nature of these precipitation systems. Forecast errors can arise from assumptions within physics parameterizations, model resolution limitations, as well as uncertainties in both the initial state of the atmosphere and land surface variables such as soil moisture and temperature. For this study, it is hypothesized that high-resolution, consistent representations of surface properties such as soil moisture and temperature, ground fluxes, and vegetation are necessary to better simulate the interactions between the land surface and atmosphere, and ultimately improve predictions of local circulations and summertime pulse convection. The NASA Short-term Prediction Research and Transition (SPORT) Center has been conducting studies to examine the impacts of high-resolution land surface initialization data generated by offline simulations of the NASA Land Informatiot System (LIS) on subsequent numerical forecasts using the Weather Research and Forecasting (WRF) model (Case et al. 2008, to appear in the Journal of Hydrometeorology). Case et al. presents improvements to simulated sea breezes and surface verification statistics over Florida by initializing WRF with land surface variables from an offline LIS spin-up run, conducted on the exact WRF domain and resolution. The current project extends the previous work over Florida, focusing on selected case studies of typical pulse convection over the southeastern U.S., with an emphasis on improving local short-term WRF simulations over the Mobile, AL and Miami, FL NWS county warning areas. Future efforts may involve examining the impacts of assimilating remotely-sensed soil moisture data, and/or introducing weekly greenness vegetation fraction composites (as opposed to monthly climatologies) into ol'fline NASA LIS runs. Based on positive impacts, the offline LIS runs could be transitioned into an operational mode, providing land surface initialization data to NWS forecast offices in real time.

Digital micromirror device-based laser-illumination Fourier ptychographic microscopy

PubMed Central

Kuang, Cuifang; Ma, Ye; Zhou, Renjie; Lee, Justin; Barbastathis, George; Dasari, Ramachandra R.; Yaqoob, Zahid; So, Peter T. C.

2015-01-01

We report a novel approach to Fourier ptychographic microscopy (FPM) by using a digital micromirror device (DMD) and a coherent laser source (532 nm) for generating spatially modulated sample illumination. Previously demonstrated FPM systems are all based on partially-coherent illumination, which offers limited throughput due to insufficient brightness. Our FPM employs a high power coherent laser source to enable shot-noise limited high-speed imaging. For the first time, a digital micromirror device (DMD), imaged onto the back focal plane of the illumination objective, is used to generate spatially modulated sample illumination field for ptychography. By coding the on/off states of the micromirrors, the illumination plane wave angle can be varied at speeds more than 4 kHz. A set of intensity images, resulting from different oblique illuminations, are used to numerically reconstruct one high-resolution image without obvious laser speckle. Experiments were conducted using a USAF resolution target and a fiber sample, demonstrating high-resolution imaging capability of our system. We envision that our approach, if combined with a coded-aperture compressive-sensing algorithm, will further improve the imaging speed in DMD-based FPM systems. PMID:26480361

Digital micromirror device-based laser-illumination Fourier ptychographic microscopy.

PubMed

Kuang, Cuifang; Ma, Ye; Zhou, Renjie; Lee, Justin; Barbastathis, George; Dasari, Ramachandra R; Yaqoob, Zahid; So, Peter T C

2015-10-19

We report a novel approach to Fourier ptychographic microscopy (FPM) by using a digital micromirror device (DMD) and a coherent laser source (532 nm) for generating spatially modulated sample illumination. Previously demonstrated FPM systems are all based on partially-coherent illumination, which offers limited throughput due to insufficient brightness. Our FPM employs a high power coherent laser source to enable shot-noise limited high-speed imaging. For the first time, a digital micromirror device (DMD), imaged onto the back focal plane of the illumination objective, is used to generate spatially modulated sample illumination field for ptychography. By coding the on/off states of the micromirrors, the illumination plane wave angle can be varied at speeds more than 4 kHz. A set of intensity images, resulting from different oblique illuminations, are used to numerically reconstruct one high-resolution image without obvious laser speckle. Experiments were conducted using a USAF resolution target and a fiber sample, demonstrating high-resolution imaging capability of our system. We envision that our approach, if combined with a coded-aperture compressive-sensing algorithm, will further improve the imaging speed in DMD-based FPM systems.

Additive manufacturing of microfluidic glass chips

NASA Astrophysics Data System (ADS)

Kotz, F.; Helmer, D.; Rapp, B. E.

2018-02-01

Additive manufacturing has gained great interest in the microfluidic community due to the numerous channel designs which can be tested in the early phases of a lab-on-a-chip device development. High resolution additive manufacturing like microstereolithography is largely associated with polymers. Polymers are at a disadvantage compared to other materials due to their softness and low chemical resistance. Whenever high chemical and thermal resistance combined with high optical transparency is needed, glasses become the material of choice. However, glasses are difficult to structure at the microscale requiring hazardous chemicals for etching processes. In this work we present additive manufacturing and high resolution patterning of microfluidic chips in transparent fused silica glass using stereolithography and microlithography. We print an amorphous silica nanocomposite at room temperature using benchtop stereolithography printers and a custom built microlithography system based on a digital mirror device. Using microlithography we printed structures with tens of micron resolution. The printed part is then converted to a transparent fused silica glass using thermal debinding and sintering. Printing of a microfluidic chip can be done within 30 minutes. The heat treatment can be done within two days.

Color image guided depth image super resolution using fusion filter

NASA Astrophysics Data System (ADS)

He, Jin; Liang, Bin; He, Ying; Yang, Jun

2018-04-01

Depth cameras are currently playing an important role in many areas. However, most of them can only obtain lowresolution (LR) depth images. Color cameras can easily provide high-resolution (HR) color images. Using color image as a guide image is an efficient way to get a HR depth image. In this paper, we propose a depth image super resolution (SR) algorithm, which uses a HR color image as a guide image and a LR depth image as input. We use the fusion filter of guided filter and edge based joint bilateral filter to get HR depth image. Our experimental results on Middlebury 2005 datasets show that our method can provide better quality in HR depth images both numerically and visually.

The sensitivity of biological finite element models to the resolution of surface geometry: a case study of crocodilian crania

PubMed Central

Evans, Alistair R.; McHenry, Colin R.

2015-01-01

The reliability of finite element analysis (FEA) in biomechanical investigations depends upon understanding the influence of model assumptions. In producing finite element models, surface mesh resolution is influenced by the resolution of input geometry, and influences the resolution of the ensuing solid mesh used for numerical analysis. Despite a large number of studies incorporating sensitivity studies of the effects of solid mesh resolution there has not yet been any investigation into the effect of surface mesh resolution upon results in a comparative context. Here we use a dataset of crocodile crania to examine the effects of surface resolution on FEA results in a comparative context. Seven high-resolution surface meshes were each down-sampled to varying degrees while keeping the resulting number of solid elements constant. These models were then subjected to bite and shake load cases using finite element analysis. The results show that incremental decreases in surface resolution can result in fluctuations in strain magnitudes, but that it is possible to obtain stable results using lower resolution surface in a comparative FEA study. As surface mesh resolution links input geometry with the resulting solid mesh, the implication of these results is that low resolution input geometry and solid meshes may provide valid results in a comparative context. PMID:26056620

Exploring the impacts of physics and resolution on aqua-planet simulations from a nonhydrostatic global variable-resolution modeling framework: IMPACTS OF PHYSICS AND RESOLUTION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhao, Chun; Leung, L. Ruby; Park, Sang-Hun

Advances in computing resources are gradually moving regional and global numerical forecasting simulations towards sub-10 km resolution, but global high resolution climate simulations remain a challenge. The non-hydrostatic Model for Prediction Across Scales (MPAS) provides a global framework to achieve very high resolution using regional mesh refinement. Previous studies using the hydrostatic version of MPAS (H-MPAS) with the physics parameterizations of Community Atmosphere Model version 4 (CAM4) found notable resolution dependent behaviors. This study revisits the resolution sensitivity using the non-hydrostatic version of MPAS (NH-MPAS) with both CAM4 and CAM5 physics. A series of aqua-planet simulations at global quasi-uniform resolutionsmore » ranging from 240 km to 30 km and global variable resolution simulations with a regional mesh refinement of 30 km resolution over the tropics are analyzed, with a primary focus on the distinct characteristics of NH-MPAS in simulating precipitation, clouds, and large-scale circulation features compared to H-MPAS-CAM4. The resolution sensitivity of total precipitation and column integrated moisture in NH-MPAS is smaller than that in H-MPAS-CAM4. This contributes importantly to the reduced resolution sensitivity of large-scale circulation features such as the inter-tropical convergence zone and Hadley circulation in NH-MPAS compared to H-MPAS. In addition, NH-MPAS shows almost no resolution sensitivity in the simulated westerly jet, in contrast to the obvious poleward shift in H-MPAS with increasing resolution, which is partly explained by differences in the hyperdiffusion coefficients used in the two models that influence wave activity. With the reduced resolution sensitivity, simulations in the refined region of the NH-MPAS global variable resolution configuration exhibit zonally symmetric features that are more comparable to the quasi-uniform high-resolution simulations than those from H-MPAS that displays zonal asymmetry in simulations inside the refined region. Overall, NH-MPAS with CAM5 physics shows less resolution sensitivity compared to CAM4. These results provide a reference for future studies to further explore the use of NH-MPAS for high-resolution climate simulations in idealized and realistic configurations.« less

Shift-connected SIMD array architectures for digital optical computing systems, with algorithms for numerical transforms and partial differential equations

NASA Astrophysics Data System (ADS)

Drabik, Timothy J.; Lee, Sing H.

1986-11-01

The intrinsic parallelism characteristics of easily realizable optical SIMD arrays prompt their present consideration in the implementation of highly structured algorithms for the numerical solution of multidimensional partial differential equations and the computation of fast numerical transforms. Attention is given to a system, comprising several spatial light modulators (SLMs), an optical read/write memory, and a functional block, which performs simple, space-invariant shifts on images with sufficient flexibility to implement the fastest known methods for partial differential equations as well as a wide variety of numerical transforms in two or more dimensions. Either fixed or floating-point arithmetic may be used. A performance projection of more than 1 billion floating point operations/sec using SLMs with 1000 x 1000-resolution and operating at 1-MHz frame rates is made.

Numerical simulation of "an American haboob"

NASA Astrophysics Data System (ADS)

Vukovic, A.; Vujadinovic, M.; Pejanovic, G.; Andric, J.; Kumjian, M. R.; Djurdjevic, V.; Dacic, M.; Prasad, A. K.; El-Askary, H. M.; Paris, B. C.; Petkovic, S.; Nickovic, S.; Sprigg, W. A.

2014-04-01

A dust storm of fearful proportions hit Phoenix in the early evening hours of 5 July 2011. This storm, an American haboob, was predicted hours in advance because numerical, land-atmosphere modeling, computing power and remote sensing of dust events have improved greatly over the past decade. High-resolution numerical models are required for accurate simulation of the small scales of the haboob process, with high velocity surface winds produced by strong convection and severe downbursts. Dust productive areas in this region consist mainly of agricultural fields, with soil surfaces disturbed by plowing and tracks of land in the high Sonoran Desert laid barren by ongoing draught. Model simulation of the 5 July 2011 dust storm uses the coupled atmospheric-dust model NMME-DREAM (Non-hydrostatic Mesoscale Model on E grid, Janjic et al., 2001; Dust REgional Atmospheric Model, Nickovic et al., 2001; Pérez et al., 2006) with 4 km horizontal resolution. A mask of the potentially dust productive regions is obtained from the land cover and the normalized difference vegetation index (NDVI) data from the Moderate Resolution Imaging Spectroradiometer (MODIS). The scope of this paper is validation of the dust model performance, and not use of the model as a tool to investigate mechanisms related to the storm. Results demonstrate the potential technical capacity and availability of the relevant data to build an operational system for dust storm forecasting as a part of a warning system. Model results are compared with radar and other satellite-based images and surface meteorological and PM10 observations. The atmospheric model successfully hindcasted the position of the front in space and time, with about 1 h late arrival in Phoenix. The dust model predicted the rapid uptake of dust and high values of dust concentration in the ensuing storm. South of Phoenix, over the closest source regions (~25 km), the model PM10 surface dust concentration reached ~2500 μg m-3, but underestimated the values measured by the PM10 stations within the city. Model results are also validated by the MODIS aerosol optical depth (AOD), employing deep blue (DB) algorithms for aerosol loadings. Model validation included Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO), equipped with the lidar instrument, to disclose the vertical structure of dust aerosols as well as aerosol subtypes. Promising results encourage further research and application of high-resolution modeling and satellite-based remote sensing to warn of approaching severe dust events and reduce risks for safety and health.

High resolution modelling of extreme precipitation events in urban areas

NASA Astrophysics Data System (ADS)

Siemerink, Martijn; Volp, Nicolette; Schuurmans, Wytze; Deckers, Dave

2015-04-01

The present day society needs to adjust to the effects of climate change. More extreme weather conditions are expected, which can lead to longer periods of drought, but also to more extreme precipitation events. Urban water systems are not designed for such extreme events. Most sewer systems are not able to drain the excessive storm water, causing urban flooding. This leads to high economic damage. In order to take appropriate measures against extreme urban storms, detailed knowledge about the behaviour of the urban water system above and below the streets is required. To investigate the behaviour of urban water systems during extreme precipitation events new assessment tools are necessary. These tools should provide a detailed and integral description of the flow in the full domain of overland runoff, sewer flow, surface water flow and groundwater flow. We developed a new assessment tool, called 3Di, which provides detailed insight in the urban water system. This tool is based on a new numerical methodology that can accurately deal with the interaction between overland runoff, sewer flow and surface water flow. A one-dimensional model for the sewer system and open channel flow is fully coupled to a two-dimensional depth-averaged model that simulates the overland flow. The tool uses a subgrid-based approach in order to take high resolution information of the sewer system and of the terrain into account [1, 2]. The combination of using the high resolution information and the subgrid based approach results in an accurate and efficient modelling tool. It is now possible to simulate entire urban water systems using extreme high resolution (0.5m x 0.5m) terrain data in combination with a detailed sewer and surface water network representation. The new tool has been tested in several Dutch cities, such as Rotterdam, Amsterdam and The Hague. We will present the results of an extreme precipitation event in the city of Schiedam (The Netherlands). This city deals with significant soil consolidation and the low-lying areas are prone to urban flooding. The simulation results are compared with measurements in the sewer network. References [1] Guus S. Stelling G.S., 2012. Quadtree flood simulations with subgrid digital elevation models. Water Management 165 (WM1):1329-1354. [2] Vincenzo Cassuli and Guus S. Stelling, 2013. A semi-implicit numerical model for urban drainage systems. International Journal for Numerical Methods in Fluids. Vol. 73:600-614. DOI: 10.1002/fld.3817

Real-time and sub-wavelength ultrafast coherent diffraction imaging in the extreme ultraviolet.

PubMed

Zürch, M; Rothhardt, J; Hädrich, S; Demmler, S; Krebs, M; Limpert, J; Tünnermann, A; Guggenmos, A; Kleineberg, U; Spielmann, C

2014-12-08

Coherent Diffraction Imaging is a technique to study matter with nanometer-scale spatial resolution based on coherent illumination of the sample with hard X-ray, soft X-ray or extreme ultraviolet light delivered from synchrotrons or more recently X-ray Free-Electron Lasers. This robust technique simultaneously allows quantitative amplitude and phase contrast imaging. Laser-driven high harmonic generation XUV-sources allow table-top realizations. However, the low conversion efficiency of lab-based sources imposes either a large scale laser system or long exposure times, preventing many applications. Here we present a lensless imaging experiment combining a high numerical aperture (NA = 0.8) setup with a high average power fibre laser driven high harmonic source. The high flux and narrow-band harmonic line at 33.2 nm enables either sub-wavelength spatial resolution close to the Abbe limit (Δr = 0.8λ) for long exposure time, or sub-70 nm imaging in less than one second. The unprecedented high spatial resolution, compactness of the setup together with the real-time capability paves the way for a plethora of applications in fundamental and life sciences.

Aplanatic Three-Mirror Objective for High-Magnification Soft X-Ray Microscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Toyoda, M.; Jinno, T.; Yanagihara, M.

2011-09-09

An innovative solution for high-magnification microscopy, based on attaching afocal optics for focal length reduction, is proposed. The solution, consisting of three spherical mirrors, allows one to enhance a magnification of a laboratory based soft x-ray microscope over 1000x, where movies with diffraction-limited resolution can be observed with an x-ray CCD. The design example, having a numerical aperture of 0.25, was successfully demonstrated both a high magnification and a large field of view.

Comparison of High-Order and Low-Order Methods for Large-Eddy Simulation of a Compressible Shear Layer

NASA Technical Reports Server (NTRS)

Mankbadi, Mina R.; Georgiadis, Nicholas J.; DeBonis, James R.

2015-01-01

The objective of this work is to compare a high-order solver with a low-order solver for performing Large-Eddy Simulations (LES) of a compressible mixing layer. The high-order method is the Wave-Resolving LES (WRLES) solver employing a Dispersion Relation Preserving (DRP) scheme. The low-order solver is the Wind-US code, which employs the second-order Roe Physical scheme. Both solvers are used to perform LES of the turbulent mixing between two supersonic streams at a convective Mach number of 0.46. The high-order and low-order methods are evaluated at two different levels of grid resolution. For a fine grid resolution, the low-order method produces a very similar solution to the highorder method. At this fine resolution the effects of numerical scheme, subgrid scale modeling, and filtering were found to be negligible. Both methods predict turbulent stresses that are in reasonable agreement with experimental data. However, when the grid resolution is coarsened, the difference between the two solvers becomes apparent. The low-order method deviates from experimental results when the resolution is no longer adequate. The high-order DRP solution shows minimal grid dependence. The effects of subgrid scale modeling and spatial filtering were found to be negligible at both resolutions. For the high-order solver on the fine mesh, a parametric study of the spanwise width was conducted to determine its effect on solution accuracy. An insufficient spanwise width was found to impose an artificial spanwise mode and limit the resolved spanwise modes. We estimate that the spanwise depth needs to be 2.5 times larger than the largest coherent structures to capture the largest spanwise mode and accurately predict turbulent mixing.

Resolution requirements for aero-optical simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mani, Ali; Wang Meng; Moin, Parviz

2008-11-10

Analytical criteria are developed to estimate the error of aero-optical computations due to inadequate spatial resolution of refractive index fields in high Reynolds number flow simulations. The unresolved turbulence structures are assumed to be locally isotropic and at low turbulent Mach number. Based on the Kolmogorov spectrum for the unresolved structures, the computational error of the optical path length is estimated and linked to the resulting error in the computed far-field optical irradiance. It is shown that in the high Reynolds number limit, for a given geometry and Mach number, the spatial resolution required to capture aero-optics within a pre-specifiedmore » error margin does not scale with Reynolds number. In typical aero-optical applications this resolution requirement is much lower than the resolution required for direct numerical simulation, and therefore, a typical large-eddy simulation can capture the aero-optical effects. The analysis is extended to complex turbulent flow simulations in which non-uniform grid spacings are used to better resolve the local turbulence structures. As a demonstration, the analysis is used to estimate the error of aero-optical computation for an optical beam passing through turbulent wake of flow over a cylinder.« less

A Wind-Forced Modeling Study of the Canary Current System from 30 Degrees N to 42.5 Degrees N

DTIC Science & Technology

1998-06-01

and Haynes and Barton (1990), using high resolution infra-red images from NOAA7 and NOAA9 and numerous in- situ measurements, reveal the existence of...dinamica das Aguas costeiras de Portugal. Dissertacao apresentada a Universidade de Lisboa para obtencao do grau de Doutor em Fisica, especializacao

Effects of immersion depth on super-resolution properties of index-different microsphere-assisted nanoimaging

NASA Astrophysics Data System (ADS)

Zhou, Yi; Tang, Yan; He, Yu; Liu, Xi; Hu, Song

2018-03-01

In related applications of microsphere-assisted super-resolution imaging in biomedical visualization and microfluidic detection, liquids are widely used as background media. For the first time, we quantitatively demonstrate that the maximum irradiances, focal lengths, and waists of photonic nanojets (PNJs) will logically vary with different immersion depths (IMDs). The experimental observations also numerically illustrate the trends of the lateral magnification and field of view (FOV) with the gradual evaporation of ethyl alcohol. This work can provide exact quantitative information for the proper selection of microspheres and IMD for the high-quality discernment of nanostructures.

ARC-1986-A86-7027

NASA Image and Video Library

1986-01-26

P-29511 BW Range: 130,000 kilometers (80,000 miles) This clear-filter, narrow-angle picture is part of the high-resolution Voyager 2 imaging sequence of Ariel, a moon of Uranus about 1,300 kilometers (800 miles) in diameter. The complexity of Ariels' surface indicates that a variety of geologic processes have occured. The numerous craters, for example, are indications of an old surface bombarded by meteroids over a long periond. Also conspicuous at this resolution, about 2.4 km (1.5 mi), are linear grooves (evidence of tectonic activity that has broken up the surface) and smooth patches (indicative of deposition of material).

The spectral element method (SEM) on variable-resolution grids: evaluating grid sensitivity and resolution-aware numerical viscosity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guba, O.; Taylor, M. A.; Ullrich, P. A.

2014-11-27

We evaluate the performance of the Community Atmosphere Model's (CAM) spectral element method on variable-resolution grids using the shallow-water equations in spherical geometry. We configure the method as it is used in CAM, with dissipation of grid scale variance, implemented using hyperviscosity. Hyperviscosity is highly scale selective and grid independent, but does require a resolution-dependent coefficient. For the spectral element method with variable-resolution grids and highly distorted elements, we obtain the best results if we introduce a tensor-based hyperviscosity with tensor coefficients tied to the eigenvalues of the local element metric tensor. The tensor hyperviscosity is constructed so that, formore » regions of uniform resolution, it matches the traditional constant-coefficient hyperviscosity. With the tensor hyperviscosity, the large-scale solution is almost completely unaffected by the presence of grid refinement. This later point is important for climate applications in which long term climatological averages can be imprinted by stationary inhomogeneities in the truncation error. We also evaluate the robustness of the approach with respect to grid quality by considering unstructured conforming quadrilateral grids generated with a well-known grid-generating toolkit and grids generated by SQuadGen, a new open source alternative which produces lower valence nodes.« less

The spectral element method on variable resolution grids: evaluating grid sensitivity and resolution-aware numerical viscosity

DOE PAGES

Guba, O.; Taylor, M. A.; Ullrich, P. A.; ...

2014-06-25

We evaluate the performance of the Community Atmosphere Model's (CAM) spectral element method on variable resolution grids using the shallow water equations in spherical geometry. We configure the method as it is used in CAM, with dissipation of grid scale variance implemented using hyperviscosity. Hyperviscosity is highly scale selective and grid independent, but does require a resolution dependent coefficient. For the spectral element method with variable resolution grids and highly distorted elements, we obtain the best results if we introduce a tensor-based hyperviscosity with tensor coefficients tied to the eigenvalues of the local element metric tensor. The tensor hyperviscosity ismore » constructed so that for regions of uniform resolution it matches the traditional constant coefficient hyperviscsosity. With the tensor hyperviscosity the large scale solution is almost completely unaffected by the presence of grid refinement. This later point is important for climate applications where long term climatological averages can be imprinted by stationary inhomogeneities in the truncation error. We also evaluate the robustness of the approach with respect to grid quality by considering unstructured conforming quadrilateral grids generated with a well-known grid-generating toolkit and grids generated by SQuadGen, a new open source alternative which produces lower valence nodes.« less

Advanced radiometric and interferometric milimeter-wave scene simulations

NASA Technical Reports Server (NTRS)

Hauss, B. I.; Moffa, P. J.; Steele, W. G.; Agravante, H.; Davidheiser, R.; Samec, T.; Young, S. K.

1993-01-01

Smart munitions and weapons utilize various imaging sensors (including passive IR, active and passive millimeter-wave, and visible wavebands) to detect/identify targets at short standoff ranges and in varied terrain backgrounds. In order to design and evaluate these sensors under a variety of conditions, a high-fidelity scene simulation capability is necessary. Such a capability for passive millimeter-wave scene simulation exists at TRW. TRW's Advanced Radiometric Millimeter-Wave Scene Simulation (ARMSS) code is a rigorous, benchmarked, end-to-end passive millimeter-wave scene simulation code for interpreting millimeter-wave data, establishing scene signatures and evaluating sensor performance. In passive millimeter-wave imaging, resolution is limited due to wavelength and aperture size. Where high resolution is required, the utility of passive millimeter-wave imaging is confined to short ranges. Recent developments in interferometry have made possible high resolution applications on military platforms. Interferometry or synthetic aperture radiometry allows the creation of a high resolution image with a sparsely filled aperture. Borrowing from research work in radio astronomy, we have developed and tested at TRW scene reconstruction algorithms that allow the recovery of the scene from a relatively small number of spatial frequency components. In this paper, the TRW modeling capability is described and numerical results are presented.

Geochemistry of Dissolved Organic Matter in a Spatially Highly Resolved Groundwater Petroleum Hydrocarbon Plume Cross-Section.

PubMed

Dvorski, Sabine E-M; Gonsior, Michael; Hertkorn, Norbert; Uhl, Jenny; Müller, Hubert; Griebler, Christian; Schmitt-Kopplin, Philippe

2016-06-07

At numerous groundwater sites worldwide, natural dissolved organic matter (DOM) is quantitatively complemented with petroleum hydrocarbons. To date, research has been focused almost exclusively on the contaminants, but detailed insights of the interaction of contaminant biodegradation, dominant redox processes, and interactions with natural DOM are missing. This study linked on-site high resolution spatial sampling of groundwater with high resolution molecular characterization of DOM and its relation to groundwater geochemistry across a petroleum hydrocarbon plume cross-section. Electrospray- and atmospheric pressure photoionization (ESI, APPI) ultrahigh resolution mass spectrometry (FT-ICR-MS) revealed a strong interaction between DOM and reactive sulfur species linked to microbial sulfate reduction, i.e., the key redox process involved in contaminant biodegradation. Excitation emission matrix (EEM) fluorescence spectroscopy in combination with Parallel Factor Analysis (PARAFAC) modeling attributed DOM samples to specific contamination traits. Nuclear magnetic resonance (NMR) spectroscopy evaluated the aromatic compounds and their degradation products in samples influenced by the petroleum contamination and its biodegradation. Our orthogonal high resolution analytical approach enabled a comprehensive molecular level understanding of the DOM with respect to in situ petroleum hydrocarbon biodegradation and microbial sulfate reduction. The role of natural DOM as potential cosubstrate and detoxification reactant may improve future bioremediation strategies.

FPscope: a field-portable high-resolution microscope using a cellphone lens.

PubMed

Dong, Siyuan; Guo, Kaikai; Nanda, Pariksheet; Shiradkar, Radhika; Zheng, Guoan

2014-10-01

The large consumer market has made cellphone lens modules available at low-cost and in high-quality. In a conventional cellphone camera, the lens module is used to demagnify the scene onto the image plane of the camera, where image sensor is located. In this work, we report a 3D-printed high-resolution Fourier ptychographic microscope, termed FPscope, which uses a cellphone lens in a reverse manner. In our platform, we replace the image sensor with sample specimens, and use the cellphone lens to project the magnified image to the detector. To supersede the diffraction limit of the lens module, we use an LED array to illuminate the sample from different incident angles and synthesize the acquired images using the Fourier ptychographic algorithm. As a demonstration, we use the reported platform to acquire high-resolution images of resolution target and biological specimens, with a maximum synthetic numerical aperture (NA) of 0.5. We also show that, the depth-of-focus of the reported platform is about 0.1 mm, orders of magnitude longer than that of a conventional microscope objective with a similar NA. The reported platform may enable healthcare accesses in low-resource settings. It can also be used to demonstrate the concept of computational optics for educational purposes.

Relaxation approximations to second-order traffic flow models by high-resolution schemes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nikolos, I.K.; Delis, A.I.; Papageorgiou, M.

2015-03-10

A relaxation-type approximation of second-order non-equilibrium traffic models, written in conservation or balance law form, is considered. Using the relaxation approximation, the nonlinear equations are transformed to a semi-linear diagonilizable problem with linear characteristic variables and stiff source terms with the attractive feature that neither Riemann solvers nor characteristic decompositions are in need. In particular, it is only necessary to provide the flux and source term functions and an estimate of the characteristic speeds. To discretize the resulting relaxation system, high-resolution reconstructions in space are considered. Emphasis is given on a fifth-order WENO scheme and its performance. The computations reportedmore » demonstrate the simplicity and versatility of relaxation schemes as numerical solvers.« less

Microfabricated ommatidia using a laser induced self-writing process for high resolution artificial compound eye optical systems.

PubMed

Jung, Hyukjin; Jeong, Ki-Hun

2009-08-17

A microfabricated compound eye, comparable to a natural compound eye shows a spherical arrangement of integrated optical units called artificial ommatidia. Each consists of a self-aligned microlens and waveguide. The increase of waveguide length is imperative to obtain high resolution images through an artificial compound eye for wide field-of - view imaging as well as fast motion detection. This work presents an effective method for increasing the waveguide length of artificial ommatidium using a laser induced self-writing process in a photosensitive polymer resin. The numerical and experimental results show the uniform formation of waveguides and the increment of waveguide length over 850 microm. (c) 2009 Optical Society of America

A simple, robust and efficient high-order accurate shock-capturing scheme for compressible flows: Towards minimalism

NASA Astrophysics Data System (ADS)

Ohwada, Taku; Shibata, Yuki; Kato, Takuma; Nakamura, Taichi

2018-06-01

Developed is a high-order accurate shock-capturing scheme for the compressible Euler/Navier-Stokes equations; the formal accuracy is 5th order in space and 4th order in time. The performance and efficiency of the scheme are validated in various numerical tests. The main ingredients of the scheme are nothing special; they are variants of the standard numerical flux, MUSCL, the usual Lagrange's polynomial and the conventional Runge-Kutta method. The scheme can compute a boundary layer accurately with a rational resolution and capture a stationary contact discontinuity sharply without inner points. And yet it is endowed with high resistance against shock anomalies (carbuncle phenomenon, post-shock oscillations, etc.). A good balance between high robustness and low dissipation is achieved by blending three types of numerical fluxes according to physical situation in an intuitively easy-to-understand way. The performance of the scheme is largely comparable to that of WENO5-Rusanov, while its computational cost is 30-40% less than of that of the advanced scheme.

Assessment of tsunami resilience of Haydarpaşa Port in the Sea of Marmara by high-resolution numerical modeling

NASA Astrophysics Data System (ADS)

Aytore, Betul; Yalciner, Ahmet Cevdet; Zaytsev, Andrey; Cankaya, Zeynep Ceren; Suzen, Mehmet Lütfi

2016-08-01

Turkey is highly prone to earthquakes because of active fault zones in the region. The Marmara region located at the western extension of the North Anatolian Fault Zone (NAFZ) is one of the most tectonically active zones in Turkey. Numerous catastrophic events such as earthquakes or earthquake/landslide-induced tsunamis have occurred in the Marmara Sea basin. According to studies on the past tsunami records, the Marmara coasts have been hit by 35 different tsunami events in the last 2000 years. The recent occurrences of catastrophic tsunamis in the world's oceans have also raised awareness about tsunamis that might take place around the Marmara coasts. Similarly, comprehensive studies on tsunamis, such as preparation of tsunami databases, tsunami hazard analysis and assessments, risk evaluations for the potential tsunami-prone regions, and establishing warning systems have accelerated. However, a complete tsunami inundation analysis in high resolution will provide a better understanding of the effects of tsunamis on a specific critical structure located in the Marmara Sea. Ports are one of those critical structures that are susceptible to marine disasters. Resilience of ports and harbors against tsunamis are essential for proper, efficient, and successful rescue operations to reduce loss of life and property. Considering this, high-resolution simulations have been carried out in the Marmara Sea by focusing on Haydarpaşa Port of the megacity Istanbul. In the first stage of simulations, the most critical tsunami sources possibly effective for Haydarpaşa Port were inputted, and the computed tsunami parameters at the port were compared to determine the most critical tsunami scenario. In the second stage of simulations, the nested domains from 90 m gird size to 10 m grid size (in the port region) were used, and the most critical tsunami scenario was modeled. In the third stage of simulations, the topography of the port and its regions were used in the two nested domains in 3-m and 1-m resolutions and the water elevations computed from the previous simulations were inputted from the border of the large domain. A tsunami numerical code, NAMI DANCE, was used in the simulations. The tsunami parameters in the highest resolution were computed in and around the port. The effect of the data resolution on the computed results has been presented. The performance of the port structures and possible effects of tsunami on port operations have been discussed. Since the harbor protection structures have not been designed to withstand tsunamis, the breakwaters' stability becomes one of the major concerns for less agitation and inundation under tsunami in Haydarpaşa Port for resilience. The flow depth, momentum fluxes, and current pattern are the other concerns that cause unexpected circulations and uncontrolled movements of objects on land and vessels in the sea.

Modeling the depth-sectioning effect in reflection-mode dynamic speckle-field interferometric microscopy

PubMed Central

Zhou, Renjie; Jin, Di; Hosseini, Poorya; Singh, Vijay Raj; Kim, Yang-hyo; Kuang, Cuifang; Dasari, Ramachandra R.; Yaqoob, Zahid; So, Peter T. C.

2017-01-01

Unlike most optical coherence microscopy (OCM) systems, dynamic speckle-field interferometric microscopy (DSIM) achieves depth sectioning through the spatial-coherence gating effect. Under high numerical aperture (NA) speckle-field illumination, our previous experiments have demonstrated less than 1 μm depth resolution in reflection-mode DSIM, while doubling the diffraction limited resolution as under structured illumination. However, there has not been a physical model to rigorously describe the speckle imaging process, in particular explaining the sectioning effect under high illumination and imaging NA settings in DSIM. In this paper, we develop such a model based on the diffraction tomography theory and the speckle statistics. Using this model, we calculate the system response function, which is used to further obtain the depth resolution limit in reflection-mode DSIM. Theoretically calculated depth resolution limit is in an excellent agreement with experiment results. We envision that our physical model will not only help in understanding the imaging process in DSIM, but also enable better designing such systems for depth-resolved measurements in biological cells and tissues. PMID:28085800

High-resolution modelling of waves, currents and sediment transport in the Catalan Sea.

NASA Astrophysics Data System (ADS)

Sánchez-Arcilla, Agustín; Grifoll, Manel; Pallares, Elena; Espino, Manuel

2013-04-01

In order to investigate coastal shelf dynamics, a sequence of high resolution multi-scale models have been implemented for the Catalan shelf (North-western Mediterranean Sea). The suite consists of a set of increasing-resolution nested models, based on the circulation model ROMS (Regional Ocean Modelling System), the wave model SWAN (Simulation Waves Nearshore) and the sediment transport model CSTM (Community Sediment Transport Model), covering different ranges of spatial (from ~1 km at shelf-slope regions to ~40 m around river mouth or local beaches) and temporal scales (from storms events to seasonal variability). Contributions in the understanding of local processes such as along-shelf dynamics in the inner-shelf, sediment dispersal from the river discharge or bi-directional wave-current interactions under different synoptic conditions and resolution have been obtained using the Catalan Coast as a pilot site. Numerical results have been compared with "ad-hoc" intensive field campaigns, data from observational models and remote sensing products. The results exhibit acceptable agreement with observations and the investigation has allowed developing generic knowledge and more efficient (process-based) strategies for the coastal and shelf management.

Triangulation-based 3D surveying borescope

NASA Astrophysics Data System (ADS)

Pulwer, S.; Steglich, P.; Villringer, C.; Bauer, J.; Burger, M.; Franz, M.; Grieshober, K.; Wirth, F.; Blondeau, J.; Rautenberg, J.; Mouti, S.; Schrader, S.

2016-04-01

In this work, a measurement concept based on triangulation was developed for borescopic 3D-surveying of surface defects. The integration of such measurement system into a borescope environment requires excellent space utilization. The triangulation angle, the projected pattern, the numerical apertures of the optical system, and the viewing angle were calculated using partial coherence imaging and geometric optical raytracing methods. Additionally, optical aberrations and defocus were considered by the integration of Zernike polynomial coefficients. The measurement system is able to measure objects with a size of 50 μm in all dimensions with an accuracy of +/- 5 μm. To manage the issue of a low depth of field while using an optical high resolution system, a wavelength dependent aperture was integrated. Thereby, we are able to control depth of field and resolution of the optical system and can use the borescope in measurement mode with high resolution and low depth of field or in inspection mode with low resolution and higher depth of field. First measurements of a demonstrator system are in good agreement with our simulations.

Modeling the spatio-temporal variability in subsurface thermal regimes across a low-relief polygonal tundra landscape: Modeling Archive

DOE Data Explorer

Kumar, Jitendra; Collier, Nathan; Bisht, Gautam; Mills, Richard T.; Thornton, Peter E.; Iversen, Colleen M.; Romanovsky, Vladimir

2016-01-27

This Modeling Archive is in support of an NGEE Arctic discussion paper under review and available at http://www.the-cryosphere-discuss.net/tc-2016-29/. Vast carbon stocks stored in permafrost soils of Arctic tundra are under risk of release to atmosphere under warming climate. Ice--wedge polygons in the low-gradient polygonal tundra create a complex mosaic of microtopographic features. The microtopography plays a critical role in regulating the fine scale variability in thermal and hydrological regimes in the polygonal tundra landscape underlain by continuous permafrost. Modeling of thermal regimes of this sensitive ecosystem is essential for understanding the landscape behaviour under current as well as changing climate. We present here an end-to-end effort for high resolution numerical modeling of thermal hydrology at real-world field sites, utilizing the best available data to characterize and parameterize the models. We develop approaches to model the thermal hydrology of polygonal tundra and apply them at four study sites at Barrow, Alaska spanning across low to transitional to high-centered polygon and representative of broad polygonal tundra landscape. A multi--phase subsurface thermal hydrology model (PFLOTRAN) was developed and applied to study the thermal regimes at four sites. Using high resolution LiDAR DEM, microtopographic features of the landscape were characterized and represented in the high resolution model mesh. Best available soil data from field observations and literature was utilized to represent the complex hetogeneous subsurface in the numerical model. This data collection provides the complete set of input files, forcing data sets and computational meshes for simulations using PFLOTRAN for four sites at Barrow Environmental Observatory. It also document the complete computational workflow for this modeling study to allow verification, reproducibility and follow up studies.

Mesoscale Circulation Variability from Five years of Quasi-continuous Glider Observations and Numerical Simulation at a Key Sub-basin 'Choke' Point.

NASA Astrophysics Data System (ADS)

Heslop, E. E.; Mourre, B.; Juza, M.; Troupin, C.; Escudier, R.; Torner, M.; Tintore, J.

2016-02-01

Quasi-continuous glider observations over 5 years have uniquely characterised a high frequency variability in the circulation through the Ibiza Channel, an important `choke' point in the Western Mediterranean Sea. This `choke' point governs the basin/sub-basin scale circulation and the north/south exchanges of different water masses. The resulting multi-scale variability impacts the regional shelf and open ocean ecosystems, including the spawning grounds of Atlantic bluefin tuna. Through the unique glider record we show the relevance of the weekly/mesoscale variability, which is of same order as the previously established seasonal and inter-annual variability. To understand the drivers of this variability we combine the glider data with numerical simulations (WMOP) and altimetry. Two key drivers are identified; extreme winter events, which cause the formation of a cold winter mode water (Winter Intermediate Water) in the shelf areas to the north of the Ibiza Channel, and mesoscale activity, which to the north produce channel `blocking' eddies and to the south intermittent and vigorous flows of fresher `Atlantic' waters through the Ibiza Channel. Results from the 2 km resolution WMOP are compared with the high-resolution (2 - 3 km.) glider data, giving insight into model validation across different scales, for both circulation and water masses. There is an emerging consensus that gliders can uniquely access critical time and length scales and in this study gliders complement existing satellite measurements and models, while opening up new capabilities for multidisciplinary, autonomous and high-resolution ocean observation.

Numerical simulation of incidence and sweep effects on delta wing vortex breakdown

NASA Technical Reports Server (NTRS)

Ekaterinaris, J. A.; Schiff, Lewis B.

1994-01-01

The structure of the vortical flowfield over delta wings at high angles of attack was investigated. Three-dimensional Navier-Stokes numerical simulations were carried out to predict the complex leeward-side flowfield characteristics, including leading-edge separation, secondary separation, and vortex breakdown. Flows over a 75- and a 63-deg sweep delta wing with sharp leading edges were investigated and compared with available experimental data. The effect of variation of circumferential grid resolution grid resolution in the vicinity of the wing leading edge on the accuracy of the solutions was addressed. Furthermore, the effect of turbulence modeling on the solutions was investigated. The effects of variation of angle of attack on the computed vortical flow structure for the 75-deg sweep delta wing were examined. At moderate angles of attack no vortex breakdown was observed. When a critical angle of attack was reached, bubble-type vortex breakdown was found. With further increase in angle of attack, a change from bubble-type breakdown to spiral-type vortex breakdown was predicted by the numerical solution. The effects of variation of sweep angle and freestream Mach number were addressed with the solutions on a 63-deg sweep delta wing.

Multi-scale properties of large eddy simulations: correlations between resolved-scale velocity-field increments and subgrid-scale quantities

NASA Astrophysics Data System (ADS)

Linkmann, Moritz; Buzzicotti, Michele; Biferale, Luca

2018-06-01

We provide analytical and numerical results concerning multi-scale correlations between the resolved velocity field and the subgrid-scale (SGS) stress-tensor in large eddy simulations (LES). Following previous studies for Navier-Stokes equations, we derive the exact hierarchy of LES equations governing the spatio-temporal evolution of velocity structure functions of any order. The aim is to assess the influence of the subgrid model on the inertial range intermittency. We provide a series of predictions, within the multifractal theory, for the scaling of correlation involving the SGS stress and we compare them against numerical results from high-resolution Smagorinsky LES and from a-priori filtered data generated from direct numerical simulations (DNS). We find that LES data generally agree very well with filtered DNS results and with the multifractal prediction for all leading terms in the balance equations. Discrepancies are measured for some of the sub-leading terms involving cross-correlation between resolved velocity increments and the SGS tensor or the SGS energy transfer, suggesting that there must be room to improve the SGS modelisation to further extend the inertial range properties for any fixed LES resolution.

Numerical Investigation of Laser Propulsion for Transport in Water Environment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Han Bing; Li Beibei; Zhang Hongchao

Problems that cumber the development of the laser propulsion in atmosphere and vacuum are discussed. Based on the theory of interaction between high-intensity laser and materials, as air and water, it is proved that transport in water environment can be impulsed by laser. The process of laser propulsion in water is investigated theoretically and numerically. It shows that not only the laser induced plasma shock wave, but also the laser induced bubble oscillation shock waves and the pressure induced by the collapsing bubble can be used. Many experimental results show that the theory and the numerical results are valid. Themore » numerical result of the contribution of every propulsion source is given in percentage. And the maximum momentum coupling coefficient Cm is given. Laser propulsion in water environment can be applied in many fields. For example, it can provide highly controllable forces of the order of micro-Newton ({mu}N) in microsystems, such as the MEMS (Micro-electromechanical Systems). It can be used as minimally invasive surgery tools of high temporal and spatial resolution. It can be used as the propulsion source in marine survey and exploitation.« less

Automated aberration correction of arbitrary laser modes in high numerical aperture systems.

PubMed

Hering, Julian; Waller, Erik H; Von Freymann, Georg

2016-12-12

Controlling the point-spread-function in three-dimensional laser lithography is crucial for fabricating structures with highest definition and resolution. In contrast to microscopy, aberrations have to be physically corrected prior to writing, to create well defined doughnut modes, bottlebeams or multi foci modes. We report on a modified Gerchberg-Saxton algorithm for spatial-light-modulator based automated aberration compensation to optimize arbitrary laser-modes in a high numerical aperture system. Using circularly polarized light for the measurement and first-guess initial conditions for amplitude and phase of the pupil function our scalar approach outperforms recent algorithms with vectorial corrections. Besides laser lithography also applications like optical tweezers and microscopy might benefit from the method presented.

Grid-converged solution and analysis of the unsteady viscous flow in a two-dimensional shock tube

NASA Astrophysics Data System (ADS)

Zhou, Guangzhao; Xu, Kun; Liu, Feng

2018-01-01

The flow in a shock tube is extremely complex with dynamic multi-scale structures of sharp fronts, flow separation, and vortices due to the interaction of the shock wave, the contact surface, and the boundary layer over the side wall of the tube. Prediction and understanding of the complex fluid dynamics are of theoretical and practical importance. It is also an extremely challenging problem for numerical simulation, especially at relatively high Reynolds numbers. Daru and Tenaud ["Evaluation of TVD high resolution schemes for unsteady viscous shocked flows," Comput. Fluids 30, 89-113 (2001)] proposed a two-dimensional model problem as a numerical test case for high-resolution schemes to simulate the flow field in a square closed shock tube. Though many researchers attempted this problem using a variety of computational methods, there is not yet an agreed-upon grid-converged solution of the problem at the Reynolds number of 1000. This paper presents a rigorous grid-convergence study and the resulting grid-converged solutions for this problem by using a newly developed, efficient, and high-order gas-kinetic scheme. Critical data extracted from the converged solutions are documented as benchmark data. The complex fluid dynamics of the flow at Re = 1000 are discussed and analyzed in detail. Major phenomena revealed by the numerical computations include the downward concentration of the fluid through the curved shock, the formation of the vortices, the mechanism of the shock wave bifurcation, the structure of the jet along the bottom wall, and the Kelvin-Helmholtz instability near the contact surface. Presentation and analysis of those flow processes provide important physical insight into the complex flow physics occurring in a shock tube.

A direct method for unfolding the resolution function from measurements of neutron induced reactions

NASA Astrophysics Data System (ADS)

Žugec, P.; Colonna, N.; Sabate-Gilarte, M.; Vlachoudis, V.; Massimi, C.; Lerendegui-Marco, J.; Stamatopoulos, A.; Bacak, M.; Warren, S. G.; n TOF Collaboration

2017-12-01

The paper explores the numerical stability and the computational efficiency of a direct method for unfolding the resolution function from the measurements of the neutron induced reactions. A detailed resolution function formalism is laid out, followed by an overview of challenges present in a practical implementation of the method. A special matrix storage scheme is developed in order to facilitate both the memory management of the resolution function matrix, and to increase the computational efficiency of the matrix multiplication and decomposition procedures. Due to its admirable computational properties, a Cholesky decomposition is at the heart of the unfolding procedure. With the smallest but necessary modification of the matrix to be decomposed, the method is successfully applied to system of 105 × 105. However, the amplification of the uncertainties during the direct inversion procedures limits the applicability of the method to high-precision measurements of neutron induced reactions.

Filter and Grid Resolution in DG-LES

NASA Astrophysics Data System (ADS)

Miao, Ling; Sammak, Shervin; Madnia, Cyrus K.; Givi, Peyman

2017-11-01

The discontinuous Galerkin (DG) methodology has proven very effective for large eddy simulation (LES) of turbulent flows. Two important parameters in DG-LES are the grid resolution (h) and the filter size (Δ). In most previous work, the filter size is usually set to be proportional to the grid spacing. In this work, the DG method is combined with a subgrid scale (SGS) closure which is equivalent to that of the filtered density function (FDF). The resulting hybrid scheme is particularly attractive because a larger portion of the resolved energy is captured as the order of spectral approximation increases. Different cases for LES of a three-dimensional temporally developing mixing layer are appraised and a systematic parametric study is conducted to investigate the effects of grid resolution, the filter width size, and the order of spectral discretization. Comparative assessments are also made via the use of high resolution direct numerical simulation (DNS) data.

Evolution of Orbitrap Mass Spectrometry Instrumentation

NASA Astrophysics Data System (ADS)

Eliuk, Shannon; Makarov, Alexander

2015-07-01

We discuss the evolution of OrbitrapTM mass spectrometry (MS) from its birth in the late 1990s to its current role as one of the most prominent techniques for MS. The Orbitrap mass analyzer is the first high-performance mass analyzer that employs trapping of ions in electrostatic fields. Tight integration with the ion injection process enables the high-resolution, mass accuracy, and sensitivity that have become essential for addressing analytical needs in numerous areas of research, as well as in routine analysis. We examine three major families of instruments (related to the LTQ Orbitrap, Q Exactive, and Orbitrap Fusion mass spectrometers) in the context of their historical development over the past ten eventful years. We discuss as well future trends and perspectives of Orbitrap MS. We illustrate the compelling potential of Orbitrap-based mass spectrometers as (ultra) high-resolution platforms, not only for high-end proteomic applications, but also for routine targeted analysis.

Diamond x-ray optics: Transparent, resilient, high-resolution, and wavefront preserving

DOE PAGES

Shvyd’ko, Yuri; Blank, Vladimir; Terentyev, Sergey

2017-06-09

Diamond features a unique combination of outstanding physical properties perfect for numerous x-ray optics applications, where traditional materials such as silicon fail to perform. In the last two decades, impressive progress has been achieved in synthesizing diamond with high crystalline perfection, in manufacturing efficient, resilient, high-resolution, wavefront-preserving diamond optical components, and in implementing them in cutting-edge x-ray instruments. Diamond optics are essential for tailoring x-rays to the most challenging needs of x-ray research. Furthermore, they are becoming vital for the generation of fully coherent hard x-rays by seeded x-ray free-electron lasers. In this article, we review progress in manufacturing flawlessmore » diamond crystal components and their applications in diverse x-ray optical devices, such as x-ray monochromators, beam splitters, high-reflectance backscattering mirrors, lenses, phase plates, diffraction gratings, bent-crystal spectrographs, and windows.« less

Numerical Boundary Conditions for Computational Aeroacoustics Benchmark Problems

NASA Technical Reports Server (NTRS)

Tam, Chritsopher K. W.; Kurbatskii, Konstantin A.; Fang, Jun

1997-01-01

Category 1, Problems 1 and 2, Category 2, Problem 2, and Category 3, Problem 2 are solved computationally using the Dispersion-Relation-Preserving (DRP) scheme. All these problems are governed by the linearized Euler equations. The resolution requirements of the DRP scheme for maintaining low numerical dispersion and dissipation as well as accurate wave speeds in solving the linearized Euler equations are now well understood. As long as 8 or more mesh points per wavelength is employed in the numerical computation, high quality results are assured. For the first three categories of benchmark problems, therefore, the real challenge is to develop high quality numerical boundary conditions. For Category 1, Problems 1 and 2, it is the curved wall boundary conditions. For Category 2, Problem 2, it is the internal radiation boundary conditions inside the duct. For Category 3, Problem 2, they are the inflow and outflow boundary conditions upstream and downstream of the blade row. These are the foci of the present investigation. Special nonhomogeneous radiation boundary conditions that generate the incoming disturbances and at the same time allow the outgoing reflected or scattered acoustic disturbances to leave the computation domain without significant reflection are developed. Numerical results based on these boundary conditions are provided.

3D radar wavefield tomography of comet interiors

NASA Astrophysics Data System (ADS)

Sava, Paul; Asphaug, Erik

2018-04-01

Answering fundamental questions about the origin and evolution of small planetary bodies hinges on our ability to image their surface and interior structure in detail and at high resolution. The interior structure is not easily accessible without systematic imaging using, e.g., radar transmission and reflection data from multiple viewpoints, as in medical tomography. Radar tomography can be performed using methodology adapted from terrestrial exploration seismology. Our feasibility study primarily focuses on full wavefield methods that facilitate high quality imaging of small body interiors. We consider the case of a monostatic system (co-located transmitters and receivers) operated in various frequency bands between 5 and 15 MHz, from a spacecraft in slow polar orbit around a spinning comet nucleus. Using realistic numerical experiments, we demonstrate that wavefield techniques can generate high resolution tomograms of comets nuclei with arbitrary shape and complex interior properties.

Interference Confocal Microscope Integrated with Spatial Phase Shifter.

PubMed

Wang, Weibo; Gu, Kang; You, Xiaoyu; Tan, Jiubin; Liu, Jian

2016-08-24

We present an interference confocal microscope (ICM) with a new single-body four-step simultaneous phase-shifter device designed to obtain high immunity to vibration. The proposed ICM combines the respective advantages of simultaneous phase shifting interferometry and bipolar differential confocal microscopy to obtain high axis resolution, large dynamic range, and reduce the sensitivity to vibration and reflectance disturbance seamlessly. A compact single body spatial phase shifter is added to capture four phase-shifted interference signals simultaneously without time delay and construct a stable and space-saving simplified interference confocal microscope system. The test result can be obtained by combining the interference phase response and the bipolar property of differential confocal microscopy without phase unwrapping. Experiments prove that the proposed microscope is capable of providing stable measurements with 1 nm of axial depth resolution for either low- or high-numerical aperture objective lenses.

Diffraction-Limited Plenoptic Imaging with Correlated Light

NASA Astrophysics Data System (ADS)

Pepe, Francesco V.; Di Lena, Francesco; Mazzilli, Aldo; Edrei, Eitan; Garuccio, Augusto; Scarcelli, Giuliano; D'Angelo, Milena

2017-12-01

Traditional optical imaging faces an unavoidable trade-off between resolution and depth of field (DOF). To increase resolution, high numerical apertures (NAs) are needed, but the associated large angular uncertainty results in a limited range of depths that can be put in sharp focus. Plenoptic imaging was introduced a few years ago to remedy this trade-off. To this aim, plenoptic imaging reconstructs the path of light rays from the lens to the sensor. However, the improvement offered by standard plenoptic imaging is practical and not fundamental: The increased DOF leads to a proportional reduction of the resolution well above the diffraction limit imposed by the lens NA. In this Letter, we demonstrate that correlation measurements enable pushing plenoptic imaging to its fundamental limits of both resolution and DOF. Namely, we demonstrate maintaining the imaging resolution at the diffraction limit while increasing the depth of field by a factor of 7. Our results represent the theoretical and experimental basis for the effective development of promising applications of plenoptic imaging.

Diffraction-Limited Plenoptic Imaging with Correlated Light.

PubMed

Pepe, Francesco V; Di Lena, Francesco; Mazzilli, Aldo; Edrei, Eitan; Garuccio, Augusto; Scarcelli, Giuliano; D'Angelo, Milena

2017-12-15

Traditional optical imaging faces an unavoidable trade-off between resolution and depth of field (DOF). To increase resolution, high numerical apertures (NAs) are needed, but the associated large angular uncertainty results in a limited range of depths that can be put in sharp focus. Plenoptic imaging was introduced a few years ago to remedy this trade-off. To this aim, plenoptic imaging reconstructs the path of light rays from the lens to the sensor. However, the improvement offered by standard plenoptic imaging is practical and not fundamental: The increased DOF leads to a proportional reduction of the resolution well above the diffraction limit imposed by the lens NA. In this Letter, we demonstrate that correlation measurements enable pushing plenoptic imaging to its fundamental limits of both resolution and DOF. Namely, we demonstrate maintaining the imaging resolution at the diffraction limit while increasing the depth of field by a factor of 7. Our results represent the theoretical and experimental basis for the effective development of promising applications of plenoptic imaging.

Nanometric depth resolution from multi-focal images in microscopy.

PubMed

Dalgarno, Heather I C; Dalgarno, Paul A; Dada, Adetunmise C; Towers, Catherine E; Gibson, Gavin J; Parton, Richard M; Davis, Ilan; Warburton, Richard J; Greenaway, Alan H

2011-07-06

We describe a method for tracking the position of small features in three dimensions from images recorded on a standard microscope with an inexpensive attachment between the microscope and the camera. The depth-measurement accuracy of this method is tested experimentally on a wide-field, inverted microscope and is shown to give approximately 8 nm depth resolution, over a specimen depth of approximately 6 µm, when using a 12-bit charge-coupled device (CCD) camera and very bright but unresolved particles. To assess low-flux limitations a theoretical model is used to derive an analytical expression for the minimum variance bound. The approximations used in the analytical treatment are tested using numerical simulations. It is concluded that approximately 14 nm depth resolution is achievable with flux levels available when tracking fluorescent sources in three dimensions in live-cell biology and that the method is suitable for three-dimensional photo-activated localization microscopy resolution. Sub-nanometre resolution could be achieved with photon-counting techniques at high flux levels.

Nanometric depth resolution from multi-focal images in microscopy

PubMed Central

Dalgarno, Heather I. C.; Dalgarno, Paul A.; Dada, Adetunmise C.; Towers, Catherine E.; Gibson, Gavin J.; Parton, Richard M.; Davis, Ilan; Warburton, Richard J.; Greenaway, Alan H.

2011-01-01

We describe a method for tracking the position of small features in three dimensions from images recorded on a standard microscope with an inexpensive attachment between the microscope and the camera. The depth-measurement accuracy of this method is tested experimentally on a wide-field, inverted microscope and is shown to give approximately 8 nm depth resolution, over a specimen depth of approximately 6 µm, when using a 12-bit charge-coupled device (CCD) camera and very bright but unresolved particles. To assess low-flux limitations a theoretical model is used to derive an analytical expression for the minimum variance bound. The approximations used in the analytical treatment are tested using numerical simulations. It is concluded that approximately 14 nm depth resolution is achievable with flux levels available when tracking fluorescent sources in three dimensions in live-cell biology and that the method is suitable for three-dimensional photo-activated localization microscopy resolution. Sub-nanometre resolution could be achieved with photon-counting techniques at high flux levels. PMID:21247948

Innovative diffraction gratings for high-resolution resonant inelastic soft x-ray scattering spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Voronov, D.L.; Warwick, T.; Gullikson, E. M.

2016-07-27

High-resolution Resonant Inelastic X-ray Scattering (RIXS) requires diffraction gratings with very exacting characteristics. The gratings should provide both very high dispersion and high efficiency which are conflicting requirements and extremely challenging to satisfy in the soft x-ray region for a traditional grazing incidence geometry. To achieve high dispersion one should increase the groove density of a grating; this however results in a diffraction angle beyond the critical angle range and results in drastic efficiency loss. The problem can be solved by use of multilayer coated blazed gratings (MBG). In this work we have investigated the diffraction characteristics of MBGs viamore » numerical simulations and have developed a procedure for optimization of grating design for a multiplexed high resolution imaging spectrometer for RIXS spectroscopy to be built in sector 6 at the Advanced Light Source (ALS). We found that highest diffraction efficiency can be achieved for gratings optimized for 4{sup th} or 5{sup th} order operation. Fabrication of such gratings is an extremely challenging technological problem. We present a first experimental prototype of these gratings and report its performance. High order and high line density gratings have the potential to be a revolutionary new optical element that should have great impact in the area of soft x-ray RIXS.« less

Resolution enhancement by extrapolation of coherent diffraction images: a quantitative study on the limits and a numerical study of nonbinary and phase objects.

PubMed

Latychevskaia, T; Chushkin, Y; Fink, H-W

2016-10-01

In coherent diffractive imaging, the resolution of the reconstructed object is limited by the numerical aperture of the experimental setup. We present here a theoretical and numerical study for achieving super-resolution by postextrapolation of coherent diffraction images, such as diffraction patterns or holograms. We demonstrate that a diffraction pattern can unambiguously be extrapolated from only a fraction of the entire pattern and that the ratio of the extrapolated signal to the originally available signal is linearly proportional to the oversampling ratio. Although there could be in principle other methods to achieve extrapolation, we devote our discussion to employing iterative phase retrieval methods and demonstrate their limits. We present two numerical studies; namely, the extrapolation of diffraction patterns of nonbinary and that of phase objects together with a discussion of the optimal extrapolation procedure. © 2016 The Authors Journal of Microscopy © 2016 Royal Microscopical Society.

Single-Image Super Resolution for Multispectral Remote Sensing Data Using Convolutional Neural Networks

NASA Astrophysics Data System (ADS)

Liebel, L.; Körner, M.

2016-06-01

In optical remote sensing, spatial resolution of images is crucial for numerous applications. Space-borne systems are most likely to be affected by a lack of spatial resolution, due to their natural disadvantage of a large distance between the sensor and the sensed object. Thus, methods for single-image super resolution are desirable to exceed the limits of the sensor. Apart from assisting visual inspection of datasets, post-processing operations—e.g., segmentation or feature extraction—can benefit from detailed and distinguishable structures. In this paper, we show that recently introduced state-of-the-art approaches for single-image super resolution of conventional photographs, making use of deep learning techniques, such as convolutional neural networks (CNN), can successfully be applied to remote sensing data. With a huge amount of training data available, end-to-end learning is reasonably easy to apply and can achieve results unattainable using conventional handcrafted algorithms. We trained our CNN on a specifically designed, domain-specific dataset, in order to take into account the special characteristics of multispectral remote sensing data. This dataset consists of publicly available SENTINEL-2 images featuring 13 spectral bands, a ground resolution of up to 10m, and a high radiometric resolution and thus satisfying our requirements in terms of quality and quantity. In experiments, we obtained results superior compared to competing approaches trained on generic image sets, which failed to reasonably scale satellite images with a high radiometric resolution, as well as conventional interpolation methods.

Subwavelength resolution Fourier ptychography with hemispherical digital condensers

NASA Astrophysics Data System (ADS)

Pan, An; Zhang, Yan; Li, Maosen; Zhou, Meiling; Lei, Ming; Yao, Baoli

2018-02-01

Fourier ptychography (FP) is a promising computational imaging technique that overcomes the physical space-bandwidth product (SBP) limit of a conventional microscope by applying angular diversity illuminations. However, to date, the effective imaging numerical aperture (NA) achievable with a commercial LED board is still limited to the range of 0.3-0.7 with a 4×/0.1NA objective due to the constraint of planar geometry with weak illumination brightness and attenuated signal-to-noise ratio (SNR). Thus the highest achievable half-pitch resolution is usually constrained between 500-1000 nm, which cannot fulfill some needs of high-resolution biomedical imaging applications. Although it is possible to improve the resolution by using a higher magnification objective with larger NA instead of enlarging the illumination NA, the SBP is suppressed to some extent, making the FP technique less appealing, since the reduction of field-of-view (FOV) is much larger than the improvement of resolution in this FP platform. Herein, in this paper, we initially present a subwavelength resolution Fourier ptychography (SRFP) platform with a hemispherical digital condenser to provide high-angle programmable plane-wave illuminations of 0.95NA, attaining a 4×/0.1NA objective with the final effective imaging performance of 1.05NA at a half-pitch resolution of 244 nm with a wavelength of 465 nm across a wide FOV of 14.60 mm2 , corresponding to an SBP of 245 megapixels. Our work provides an essential step of FP towards high-NA imaging applications without scarfing the FOV, making it more practical and appealing.

ESiWACE: A Center of Excellence for HPC applications to support cloud resolving earth system modelling

NASA Astrophysics Data System (ADS)

Biercamp, Joachim; Adamidis, Panagiotis; Neumann, Philipp

2017-04-01

With the exa-scale era approaching, length and time scales used for climate research on one hand and numerical weather prediction on the other hand blend into each other. The Centre of Excellence in Simulation of Weather and Climate in Europe (ESiWACE) represents a European consortium comprising partners from climate, weather and HPC in their effort to address key scientific challenges that both communities have in common. A particular challenge is to reach global models with spatial resolutions that allow simulating convective clouds and small-scale ocean eddies. These simulations would produce better predictions of trends and provide much more fidelity in the representation of high-impact regional events. However, running such models in operational mode, i.e with sufficient throughput in ensemble mode clearly will require exa-scale computing and data handling capability. We will discuss the ESiWACE initiative and relate it to work-in-progress on high-resolution simulations in Europe. We present recent strong scalability measurements from ESiWACE to demonstrate current computability in weather and climate simulation. A special focus in this particular talk is on the Icosahedal Nonhydrostatic (ICON) model used for a comparison of high resolution regional and global simulations with high quality observation data. We demonstrate that close-to-optimal parallel efficiency can be achieved in strong scaling global resolution experiments on Mistral/DKRZ, e.g. 94% for 5km resolution simulations using 36k cores on Mistral/DKRZ. Based on our scalability and high-resolution experiments, we deduce and extrapolate future capabilities for ICON that are expected for weather and climate research at exascale.

A versatile embedded boundary adaptive mesh method for compressible flow in complex geometry

NASA Astrophysics Data System (ADS)

Al-Marouf, M.; Samtaney, R.

2017-05-01

We present an embedded ghost fluid method for numerical solutions of the compressible Navier Stokes (CNS) equations in arbitrary complex domains. A PDE multidimensional extrapolation approach is used to reconstruct the solution in the ghost fluid regions and imposing boundary conditions on the fluid-solid interface, coupled with a multi-dimensional algebraic interpolation for freshly cleared cells. The CNS equations are numerically solved by the second order multidimensional upwind method. Block-structured adaptive mesh refinement, implemented with the Chombo framework, is utilized to reduce the computational cost while keeping high resolution mesh around the embedded boundary and regions of high gradient solutions. The versatility of the method is demonstrated via several numerical examples, in both static and moving geometry, ranging from low Mach number nearly incompressible flows to supersonic flows. Our simulation results are extensively verified against other numerical results and validated against available experimental results where applicable. The significance and advantages of our implementation, which revolve around balancing between the solution accuracy and implementation difficulties, are briefly discussed as well.

Immersion Gratings for Infrared High-resolution Spectroscopy

NASA Astrophysics Data System (ADS)

Sarugaku, Yuki; Ikeda, Yuji; Kobayashi, Naoto; Kaji, Sayumi; Sukegawa, Takashi; Sugiyama, Shigeru; Nakagawa, Takao; Arasaki, Takayuki; Kondo, Sohei; Nakanishi, Kenshi; Yasui, Chikako; Kawakita, Hideyo

2016-10-01

High-resolution spectroscopy in the infrared wavelength range is essential for observations of minor isotopologues, such as HDO for water, and prebiotic organic molecules like hydrocarbons/P-bearing molecules because numerous vibrational molecular bands (including non-polar molecules) are located in this wavelength range. High spectral resolution enables us to detect weak lines without spectral line confusion. This technique has been widely used in planetary sciences, e.g., cometary coma (H2O, CO, and organic molecules), the martian atmosphere (CH4, CO2, H2O and HDO), and the upper atmosphere of gas giants (H3+ and organic molecules such as C2H6). Spectrographs with higher resolution (and higher sensitivity) still have a potential to provide a plenty of findings. However, because the size of spectrographs scales with the spectral resolution, it is difficult to realize it.Immersion grating (IG), which is a diffraction grating wherein the diffraction surface is immersed in a material with a high refractive index (n > 2), provides n times higher spectral resolution compared to a reflective grating of the same size. Because IG reduces the size of spectrograph to 1/n compared to the spectrograph with the same spectral resolution using a conventional reflective grating, it is widely acknowledged as a key optical device to realize compact spectrographs with high spectral resolution.Recently, we succeeded in fabricating a CdZnTe immersion grating with the theoretically predicted diffraction efficiency by machining process using an ultrahigh-precision five-axis processing machine developed by Canon Inc. Using the same technique, we completed a practical germanium (Ge) immersion grating with both a reflection coating on the grating surface and the an AR coating on the entrance surface. It is noteworthy that the wide wavelength range from 2 to 20 um can be covered by the two immersion gratings.In this paper, we present the performances and the applications of the immersion gratings, including the development of a long-NIR (2-5um) high-resolution (R=80,000) spectrograph with Ge-immersion grating, VINROUGE, which is a prototype for the TMT MIR instrument.

Analysis of a highly birefringent asymmetric photonic crystal fibre based on a surface plasmon resonance sensor

NASA Astrophysics Data System (ADS)

Liu, Chao; Wang, Famei; Zheng, Shijie; Sun, Tao; Lv, Jingwei; Liu, Qiang; Yang, Lin; Mu, Haiwei; Chu, Paul K.

2016-07-01

A highly birefringent photonic crystal fibre is proposed and characterized based on a surface plasmon resonance sensor. The birefringence of the sensor is numerically analyzed by the finite-element method. In the numerical simulation, the resonance wavelength can be directly positioned at this birefringence abrupt change point and the depth of the abrupt change of birefringence reflects the intensity of excited surface plasmon. Consequently, the novel approach can accurately locate the resonance peak of the system without analyzing the loss spectrum. Simulated average sensitivity is as high as 1131 nm/RIU, corresponding to a resolution of 1 × 10-4 RIU in this sensor. Therefore, results obtained via the approach not only show polarization independence and less noble metal consumption, but also reveal better performance in terms of accuracy and computation efficiency.

Air-Sea Interaction Processes in Low and High-Resolution Coupled Climate Model Simulations for the Southeast Pacific

NASA Astrophysics Data System (ADS)

Porto da Silveira, I.; Zuidema, P.; Kirtman, B. P.

2017-12-01

The rugged topography of the Andes Cordillera along with strong coastal upwelling, strong sea surface temperatures (SST) gradients and extensive but geometrically-thin stratocumulus decks turns the Southeast Pacific (SEP) into a challenge for numerical modeling. In this study, hindcast simulations using the Community Climate System Model (CCSM4) at two resolutions were analyzed to examine the importance of resolution alone, with the parameterizations otherwise left unchanged. The hindcasts were initialized on January 1 with the real-time oceanic and atmospheric reanalysis (CFSR) from 1982 to 2003, forming a 10-member ensemble. The two resolutions are (0.1o oceanic and 0.5o atmospheric) and (1.125o oceanic and 0.9o atmospheric). The SST error growth in the first six days of integration (fast errors) and those resulted from model drift (saturated errors) are assessed and compared towards evaluating the model processes responsible for the SST error growth. For the high-resolution simulation, SST fast errors are positive (+0.3oC) near the continental borders and negative offshore (-0.1oC). Both are associated with a decrease in cloud cover, a weakening of the prevailing southwesterly winds and a reduction of latent heat flux. The saturated errors possess a similar spatial pattern, but are larger and are more spatially concentrated. This suggests that the processes driving the errors already become established within the first week, in contrast to the low-resolution simulations. These, instead, manifest too-warm SSTs related to too-weak upwelling, driven by too-strong winds and Ekman pumping. Nevertheless, the ocean surface tends to be cooler in the low-resolution simulation than the high-resolution due to a higher cloud cover. Throughout the integration, saturated SST errors become positive and could reach values up to +4oC. These are accompanied by upwelling dumping and a decrease in cloud cover. High and low resolution models presented notable differences in how SST errors variability drove atmospheric changes, especially because the high resolution is sensitive to resurgence regions. This allows the model to resolve cloud heights and establish different radiative feedbacks.

Stars and their Environments at High-Resolution with IGRINS

NASA Astrophysics Data System (ADS)

Mace, Gregory; Jaffe, Daniel; Kaplan, Kyle; Kidder, Benjamin; Oh, Heeyoung; Sneden, Christopher; Afşar, Melike

2016-06-01

TheImmersion Grating Infrared Spectrometer (IGRINS) is a revolutionary instrument that exploits broad spectral coverage at high-resolution in the near-infrared. There are no moving parts in IGRINS and its high-throughput white-pupil design maximizes sensitivity. IGRINS on the 2.7 meter Harlan J. Smith Telescope at McDonald Observatory is nearly as sensitive as CRIRES at the 8 meter Very Large Telescope. However, IGRINS at R=45,000 has more than 30 times the spectral grasp of CRIRES. The use of an immersion grating facilitates a compact cryostat while providing simultaneous H and K band observations with complete wavelength coverage from 1.45 - 2.45 microns. Here we discuss details of instrument performance and summarize the application of IGRINS to stellar characterization, star formation in regions like Taurus and Ophiuchus, the interstellar medium, and photodissociation regions. IGRINS has the largest spectral grasp of any high-resolution, near-infrared spectrograph, allowing us to study star formation and evolution in unprecedented detail. With its fixed format and high sensitivity, IGRINS is a great survey instrument for star clusters, high signal-to-noise (SNR>300) studies of field stars, and for mapping the interstellar medium. As a prototype for GMTNIRS on the Giant Magellan Telescope, IGRINS represents the future of high-resolution spectroscopy. In the future IGRINS will be deployed to numerous facilities and will remain a versatile instrument for the community while producing a rich archive of uniform spectra.

FY16 NRL DoD High Performance Computing Modernization Program

DTIC Science & Technology

2017-09-15

explored both wind and wave forcing in the numerical wave tank. The model uses high spatial and temporal resolution and a multi-phase formulation to...Results: The ADVED_NS code was used to predict the effect of the standoff distance between micron- diameter wires and flow frequency on the total...contours for a flow over 3D wire mesh. Figure 2 shows verifications comparing computed and theoretical drag forces for the flow over two cylinders in an

Full-field OCT: applications in ophthalmology

NASA Astrophysics Data System (ADS)

Grieve, Kate; Dubois, Arnaud; Paques, Michel; Le Gargasson, Jean-Francois; Boccara, Albert C.

2005-04-01

We present images of ocular tissues obtained using ultrahigh resolution full-field OCT. The experimental setup is based on the Linnik interferometer, illuminated by a tungsten halogen lamp. En face tomographic images are obtained in real-time without scanning by computing the difference of two phase-opposed interferometric images recorded by a high-resolution CCD camera. A spatial resolution of 0.7 μm × 0.9 μm (axial × transverse) is achieved thanks to the short source coherence length and the use of high numerical aperture microscope objectives. A detection sensitivity of 90 dB is obtained by means of image averaging and pixel binning. Whole unfixed eyes and unstained tissue samples (cornea, lens, retina, choroid and sclera) of ex vivo rat, mouse, rabbit and porcine ocular tissues were examined. The unprecedented resolution of our instrument allows cellular-level resolution in the cornea and retina, and visualization of individual fibers in the lens. Transcorneal lens imaging was possible in all animals, and in albino animals, transscleral retinal imaging was achieved. We also introduce our rapid acquisition full-field optical coherence tomography system designed to accommodate in vivo ophthalmologic imaging. The variations on the original system technology include the introduction of a xenon arc lamp as source, and rapid image acquisition performed by a high-speed CMOS camera, reducing acquisition time to 5 ms per frame.

Numerical techniques for the solution of the compressible Navier-Stokes equations and implementation of turbulence models. [separated turbulent boundary layer flow problems

NASA Technical Reports Server (NTRS)

Baldwin, B. S.; Maccormack, R. W.; Deiwert, G. S.

1975-01-01

The time-splitting explicit numerical method of MacCormack is applied to separated turbulent boundary layer flow problems. Modifications of this basic method are developed to counter difficulties associated with complicated geometry and severe numerical resolution requirements of turbulence model equations. The accuracy of solutions is investigated by comparison with exact solutions for several simple cases. Procedures are developed for modifying the basic method to improve the accuracy. Numerical solutions of high-Reynolds-number separated flows over an airfoil and shock-separated flows over a flat plate are obtained. A simple mixing length model of turbulence is used for the transonic flow past an airfoil. A nonorthogonal mesh of arbitrary configuration facilitates the description of the flow field. For the simpler geometry associated with the flat plate, a rectangular mesh is used, and solutions are obtained based on a two-equation differential model of turbulence.

Satellite observed thermodynamics during FGGE

NASA Technical Reports Server (NTRS)

Smith, W. L.

1985-01-01

During the First Global Atmospheric Research Program (GARP) Global Experiment (FGGE), determinations of temperature and moisture were made from TIROS-N and NOAA-6 satellite infrared and microwave sounding radiance measurements. The data were processed by two methods differing principally in their horizontal resolution. At the National Earth Satellite Service (NESS) in Washington, D.C., the data were produced operationally with a horizontal resolution of 250 km for inclusion in the FGGE Level IIb data sets for application to large-scale numerical analysis and prediction models. High horizontal resolution (75 km) sounding data sets were produced using man-machine interactive methods for the special observing periods of FGGE at the NASA/Goddard Space Flight Center and archived as supplementary Level IIb. The procedures used for sounding retrieval and the characteristics and quality of these thermodynamic observations are given.

Take Away Body Parts! An Investigation into the Use of 3D-Printed Anatomical Models in Undergraduate Anatomy Education

ERIC Educational Resources Information Center

Smith, Claire F.; Tollemache, Nicholas; Covill, Derek; Johnston, Malcolm

2018-01-01

Understanding the three-dimensional (3D) nature of the human form is imperative for effective medical practice and the emergence of 3D printing creates numerous opportunities to enhance aspects of medical and healthcare training. A recently deceased, un-embalmed donor was scanned through high-resolution computed tomography. The scan data underwent…

Freshwater Export from the Arctic Ocean and its Downstream Effect on Labrador Sea Deep Convection in a High-Resolution Numerical Model

DTIC Science & Technology

2010-12-01

Arctic has been observed in the northern Canadian Arctic Archipelago ( Bourke and McLaren 1992). There, thick multiyear ice of Arctic origin encounters...Affairs, 87(2), 63-77. 172 Bourke , R. H., and A. S. McLaren, 1992: Contour mapping of Arctic Basin ice draft and roughness parameters. J. Geophys

"Housewifery" in the High School: The Quest for Social Control, 1905-1915.

ERIC Educational Resources Information Center

Weis, Lois

A critical issue at the turn of the century was the women's role in urban America. According to numerous "experts" of that time, the very future of the nation depended upon the successful resolution of this "woman problem." The family was in a state of decline and the falling white Anglo-Saxon Protestant birth rate was considered tantamount to…

Geostrophic Vortex Dynamics

DTIC Science & Technology

1988-10-01

Generalized Kirchhoff Vortices 176 B. The 2-Level Rankine Vortex: Critical Points & Stability 181 C. Tripolar Coherent Euler Vortices 186 7...spontaneously in spectral simulations. One such example is provided by the tripolar vortex structureE which will be examined in detail in Chapter 6. It...of the tripolar coherent vortex structures that have recently been observed in very high resolution numerical simulations of two- dimensional

Math on a Sphere: Making Use of Public Displays in Education

ERIC Educational Resources Information Center

Eisenberg, Michael; Basman, Antranig; Hsi, Sherry

2013-01-01

Science on a Sphere (SoS) is a compelling educational display installed at numerous museums and planetariums around the world; essentially the SoS display is a large spherical surface on which multicolor high-resolution depictions of (e.g.) planetary weather maps may be depicted. Fascinating as the SoS display is, however, it is in practice…

Rotordynamic Instability Problems in High-Performance Turbomachinery, 1988

NASA Technical Reports Server (NTRS)

1989-01-01

The continuing trend toward a unified view is supported with several developments in the design and manufacture of turbomachines with enhanced stability characteristics along with data and associated numerical/theoretical results. The intent is to provide a continuing impetus for an understanding and resolution of these problems. Topics addressed include: field experience, dampers, seals, impeller forces, bearings, and compressor and rotor modeling.

Early Earth plume-lid tectonics: A high-resolution 3D numerical modelling approach

NASA Astrophysics Data System (ADS)

Fischer, R.; Gerya, T.

2016-10-01

Geological-geochemical evidence point towards higher mantle potential temperature and a different type of tectonics (global plume-lid tectonics) in the early Earth (>3.2 Ga) compared to the present day (global plate tectonics). In order to investigate tectono-magmatic processes associated with plume-lid tectonics and crustal growth under hotter mantle temperature conditions, we conduct a series of 3D high-resolution magmatic-thermomechanical models with the finite-difference code I3ELVIS. No external plate tectonic forces are applied to isolate 3D effects of various plume-lithosphere and crust-mantle interactions. Results of the numerical experiments show two distinct phases in coupled crust-mantle evolution: (1) a longer (80-100 Myr) and relatively quiet 'growth phase' which is marked by growth of crust and lithosphere, followed by (2) a short (∼20 Myr) and catastrophic 'removal phase', where unstable parts of the crust and mantle lithosphere are removed by eclogitic dripping and later delamination. This modelling suggests that the early Earth plume-lid tectonic regime followed a pattern of episodic growth and removal also called episodic overturn with a periodicity of ∼100 Myr.

Tsunami hazard maps of spanish coast at national scale from seismic sources

NASA Astrophysics Data System (ADS)

Aniel-Quiroga, Íñigo; González, Mauricio; Álvarez-Gómez, José Antonio; García, Pablo

2017-04-01

Tsunamis are a moderately frequent phenomenon in the NEAM (North East Atlantic and Mediterranean) region, and consequently in Spain, as historic and recent events have affected this area. I.e., the 1755 earthquake and tsunami affected the Spanish Atlantic coasts of Huelva and Cadiz and the 2003 Boumerdés earthquake triggered a tsunami that reached Balearic island coast in less than 45 minutes. The risk in Spain is real and, its population and tourism rate makes it vulnerable to this kind of catastrophic events. The Indian Ocean tsunami in 2004 and the tsunami in Japan in 2011 launched the worldwide development and application of tsunami risk reduction measures that have been taken as a priority in this field. On November 20th 2015 the directive of the Spanish civil protection agency on planning under the emergency of tsunami was presented. As part of the Spanish National Security strategy, this document specifies the structure of the action plans at different levels: National, regional and local. In this sense, the first step is the proper evaluation of the tsunami hazard at National scale. This work deals with the assessment of the tsunami hazard in Spain, by means of numerical simulations, focused on the elaboration of tsunami hazard maps at National scale. To get this, following a deterministic approach, the seismic structures whose earthquakes could generate the worst tsunamis affecting the coast of Spain have been compiled and characterized. These worst sources have been propagated numerically along a reconstructed bathymetry, built from the best resolution available data. This high-resolution bathymetry was joined with a 25-m resolution DTM, to generate continuous offshore-onshore space, allowing the calculation of the flooded areas prompted by each selected source. The numerical model applied for the calculation of the tsunami propagations was COMCOT. The maps resulting from the numerical simulations show not only the tsunami amplitude at coastal areas but also the run-up and inundation length from the coastline. The run-up has been calculated with numerical model, complemented with an alternative method, based on interpolation on a tsunami run-up database created ad hoc. These estimated variables allow the identification of the most affected areas in case of tsunami and they are also the base for the local authorities to evaluate the necessity of new higher resolution studies at local scale on specific areas.

Observed and modeled mesoscale variability near the Gulf Stream and Kuroshio Extension

NASA Astrophysics Data System (ADS)

Schmitz, William J.; Holland, William R.

1986-08-01

Our earliest intercomparisons between western North Atlantic data and eddy-resolving two-layer quasi-geostrophic symmetric-double-gyre steady wind-forced numerical model results focused on the amplitudes and largest horizontal scales in patterns of eddy kinetic energy, primarily abyssal. Here, intercomparisons are extended to recent eight-layer model runs and new data which allow expansion of the investigation to the Kuroshio Extension and throughout much of the water column. Two numerical experiments are shown to have realistic zonal, vertical, and temporal eddy scales in the vicinity of the Kuroshio Extension in one case and the Gulf Stream in the other. Model zonal mean speeds are larger than observed, but vertical shears are in general agreement with the data. A longitudinal displacement between the maximum intensity in surface and abyssal eddy fields as observed for the North Atlantic is not found in the model results. The numerical simulations examined are highly idealized, notably with respect to basin shape, topography, wind-forcing, and of course dissipation. Therefore the zero-order agreement between modeled and observed basic characteristics of mid-latitude jets and their associated eddy fields suggests that such properties are predominantly determined by the physical mechanisms which dominate the models, where the fluctuations are the result of instability processes. The comparatively high vertical resolution of the model is needed to compare with new higher-resolution data as well as for dynamical reasons, although the precise number of layers required either kinematically or dynamically (or numerically) has not been determined; we estimate four to six when no attempt is made to account for bottom- or near-surface-intensified phenomena.

Experimental High-Resolution Land Surface Prediction System for the Vancouver 2010 Winter Olympic Games

NASA Astrophysics Data System (ADS)

Belair, S.; Bernier, N.; Tong, L.; Mailhot, J.

2008-05-01

The 2010 Winter Olympic and Paralympic Games will take place in Vancouver, Canada, from 12 to 28 February 2010 and from 12 to 21 March 2010, respectively. In order to provide the best possible guidance achievable with current state-of-the-art science and technology, Environment Canada is currently setting up an experimental numerical prediction system for these special events. This system consists of a 1-km limited-area atmospheric model that will be integrated for 16h, twice a day, with improved microphysics compared with the system currently operational at the Canadian Meteorological Centre. In addition, several new and original tools will be used to adapt and refine predictions near and at the surface. Very high-resolution two-dimensional surface systems, with 100-m and 20-m grid size, will cover the Vancouver Olympic area. Using adaptation methods to improve the forcing from the lower-resolution atmospheric models, these 2D surface models better represent surface processes, and thus lead to better predictions of snow conditions and near-surface air temperature. Based on a similar strategy, a single-point model will be implemented to better predict surface characteristics at each station of an observing network especially installed for the 2010 events. The main advantage of this single-point system is that surface observations are used as forcing for the land surface models, and can even be assimilated (although this is not expected in the first version of this new tool) to improve initial conditions of surface variables such as snow depth and surface temperatures. Another adaptation tool, based on 2D stationnary solutions of a simple dynamical system, will be used to produce near-surface winds on the 100-m grid, coherent with the high- resolution orography. The configuration of the experimental numerical prediction system will be presented at the conference, together with preliminary results for winter 2007-2008.

Multiheterodyne spectroscopy using interband cascade lasers

NASA Astrophysics Data System (ADS)

Sterczewski, Lukasz A.; Westberg, Jonas; Patrick, Charles Link; Kim, Chul Soo; Kim, Mijin; Canedy, Chadwick L.; Bewley, William W.; Merritt, Charles D.; Vurgaftman, Igor; Meyer, Jerry R.; Wysocki, Gerard

2018-01-01

While midinfrared radiation can be used to identify and quantify numerous chemical species, contemporary broadband midinfrared spectroscopic systems are often hindered by large footprints, moving parts, and high power consumption. In this work, we demonstrate multiheterodyne spectroscopy (MHS) using interband cascade lasers, which combines broadband spectral coverage with high spectral resolution and energy-efficient operation. The lasers generate up to 30 mW of continuous-wave optical power while consuming <0.5 W of electrical power. A computational phase and timing correction algorithm is used to obtain kHz linewidths of the multiheterodyne beat notes and up to 30 dB improvement in signal-to-noise ratio. The versatility of the multiheterodyne technique is demonstrated by performing both rapidly swept absorption and dispersion spectroscopic assessments of low-pressure ethylene (C2H4) acquired by extracting a single beat note from the multiheterodyne signal, as well as broadband MHS of methane (CH4) acquired with all available beat notes with microsecond temporal resolution and an instantaneous optical bandwidth of ˜240 GHz. The technology shows excellent potential for portable and high-resolution solid-state spectroscopic chemical sensors operating in the midinfrared.

Optimal control of a coupled partial and ordinary differential equations system for the assimilation of polarimetry Stokes vector measurements in tokamak free-boundary equilibrium reconstruction with application to ITER

NASA Astrophysics Data System (ADS)

Faugeras, Blaise; Blum, Jacques; Heumann, Holger; Boulbe, Cédric

2017-08-01

The modelization of polarimetry Faraday rotation measurements commonly used in tokamak plasma equilibrium reconstruction codes is an approximation to the Stokes model. This approximation is not valid for the foreseen ITER scenarios where high current and electron density plasma regimes are expected. In this work a method enabling the consistent resolution of the inverse equilibrium reconstruction problem in the framework of non-linear free-boundary equilibrium coupled to the Stokes model equation for polarimetry is provided. Using optimal control theory we derive the optimality system for this inverse problem. A sequential quadratic programming (SQP) method is proposed for its numerical resolution. Numerical experiments with noisy synthetic measurements in the ITER tokamak configuration for two test cases, the second of which is an H-mode plasma, show that the method is efficient and that the accuracy of the identification of the unknown profile functions is improved compared to the use of classical Faraday measurements.

A second-order shock-adaptive Godunov scheme based on the generalized Lagrangian formulation

NASA Astrophysics Data System (ADS)

Lepage, Claude

Application of the Godunov scheme to the Euler equations of gas dynamics, based on the Eulerian formulation of flow, smears discontinuities (especially sliplines) over several computational cells, while the accuracy in the smooth flow regions is of the order of a function of the cell width. Based on the generalized Lagrangian formulation (GLF), the Godunov scheme yields far superior results. By the use of coordinate streamlines in the GLF, the slipline (itself a streamline) is resolved crisply. Infinite shock resolution is achieved through the splitting of shock cells, while the accuracy in the smooth flow regions is improved using a nonconservative formulation of the governing equations coupled to a second order extension of the Godunov scheme. Furthermore, GLF requires no grid generation for boundary value problems and the simple structure of the solution to the Riemann problem in the GLF is exploited in the numerical implementation of the shock adaptive scheme. Numerical experiments reveal high efficiency and unprecedented resolution of shock and slipline discontinuities.

High resolution modelling and observation of wind-driven surface currents in a semi-enclosed estuary

NASA Astrophysics Data System (ADS)

Nash, S.; Hartnett, M.; McKinstry, A.; Ragnoli, E.; Nagle, D.

2012-04-01

Hydrodynamic circulation in estuaries is primarily driven by tides, river inflows and surface winds. While tidal and river data can be quite easily obtained for input to hydrodynamic models, sourcing accurate surface wind data is problematic. Firstly, the wind data used in hydrodynamic models is usually measured on land and can be quite different in magnitude and direction from offshore winds. Secondly, surface winds are spatially-varying but due to a lack of data it is common practice to specify a non-varying wind speed and direction across the full extents of a model domain. These problems can lead to inaccuracies in the surface currents computed by three-dimensional hydrodynamic models. In the present research, a wind forecast model is coupled with a three-dimensional numerical model of Galway Bay, a semi-enclosed estuary on the west coast of Ireland, to investigate the effect of surface wind data resolution on model accuracy. High resolution and low resolution wind fields are specified to the model and the computed surface currents are compared with high resolution surface current measurements obtained from two high frequency SeaSonde-type Coastal Ocean Dynamics Applications Radars (CODAR). The wind forecast models used for the research are Harmonie cy361.3, running on 2.5 and 0.5km spatial grids for the low resolution and high resolution models respectively. The low-resolution model runs over an Irish domain on 540x500 grid points with 60 vertical levels and a 60s timestep and is driven by ECMWF boundary conditions. The nested high-resolution model uses 300x300 grid points on 60 vertical levels and a 12s timestep. EFDC (Environmental Fluid Dynamics Code) is used for the hydrodynamic model. The Galway Bay model has ten vertical layers and is resolved spatially and temporally at 150m and 4 sec respectively. The hydrodynamic model is run for selected hindcast dates when wind fields were highly energetic. Spatially- and temporally-varying wind data is provided by offline coupling with the wind forecast models. Modelled surface currents show good correlation with CODAR observed currents and the resolution of the surface wind data is shown to be important for model accuracy.

A compact 45 kV curve tracer with picoampere current measurement capability.

PubMed

Sullivan, W W; Mauch, D; Bullick, A; Hettler, C; Neuber, A; Dickens, J

2013-03-01

This paper discusses a compact high voltage curve tracer for high voltage semiconductor device characterization. The system sources up to 3 mA at up to 45 kV in dc conditions. It measures from 328 V to 60 kV with 15 V resolution and from 9.4 pA to 4 mA with 100 fA minimum resolution. Control software for the system is written in Microsoft Visual C# and features real-time measurement control and IV plotting, arc-protection and detection, an electrically isolated universal serial bus interface, and easy data exporting capabilities. The system has survived numerous catastrophic high voltage device-under-test arcing failures with no loss of measurement capability or system damage. Overall sweep times are typically under 2 min, and the curve tracer system was used to characterize the blocking performance of high voltage ceramic capacitors, high voltage silicon carbide photoconductive semiconductor switches, and high voltage coaxial cable.

Accelerated high-resolution photoacoustic tomography via compressed sensing

NASA Astrophysics Data System (ADS)

Arridge, Simon; Beard, Paul; Betcke, Marta; Cox, Ben; Huynh, Nam; Lucka, Felix; Ogunlade, Olumide; Zhang, Edward

2016-12-01

Current 3D photoacoustic tomography (PAT) systems offer either high image quality or high frame rates but are not able to deliver high spatial and temporal resolution simultaneously, which limits their ability to image dynamic processes in living tissue (4D PAT). A particular example is the planar Fabry-Pérot (FP) photoacoustic scanner, which yields high-resolution 3D images but takes several minutes to sequentially map the incident photoacoustic field on the 2D sensor plane, point-by-point. However, as the spatio-temporal complexity of many absorbing tissue structures is rather low, the data recorded in such a conventional, regularly sampled fashion is often highly redundant. We demonstrate that combining model-based, variational image reconstruction methods using spatial sparsity constraints with the development of novel PAT acquisition systems capable of sub-sampling the acoustic wave field can dramatically increase the acquisition speed while maintaining a good spatial resolution: first, we describe and model two general spatial sub-sampling schemes. Then, we discuss how to implement them using the FP interferometer and demonstrate the potential of these novel compressed sensing PAT devices through simulated data from a realistic numerical phantom and through measured data from a dynamic experimental phantom as well as from in vivo experiments. Our results show that images with good spatial resolution and contrast can be obtained from highly sub-sampled PAT data if variational image reconstruction techniques that describe the tissues structures with suitable sparsity-constraints are used. In particular, we examine the use of total variation (TV) regularization enhanced by Bregman iterations. These novel reconstruction strategies offer new opportunities to dramatically increase the acquisition speed of photoacoustic scanners that employ point-by-point sequential scanning as well as reducing the channel count of parallelized schemes that use detector arrays.

Supernova feedback in numerical simulations of galaxy formation: separating physics from numerics

NASA Astrophysics Data System (ADS)

Smith, Matthew C.; Sijacki, Debora; Shen, Sijing

2018-07-01

While feedback from massive stars exploding as supernovae (SNe) is thought to be one of the key ingredients regulating galaxy formation, theoretically it is still unclear how the available energy couples to the interstellar medium and how galactic scale outflows are launched. We present a novel implementation of six sub-grid SN feedback schemes in the moving-mesh code AREPO, including injections of thermal and/or kinetic energy, two parametrizations of delayed cooling feedback and a `mechanical' feedback scheme that injects the correct amount of momentum depending on the relevant scale of the SN remnant resolved. All schemes make use of individually time-resolved SN events. Adopting isolated disc galaxy set-ups at different resolutions, with the highest resolution runs reasonably resolving the Sedov-Taylor phase of the SN, we aim to find a physically motivated scheme with as few tunable parameters as possible. As expected, simple injections of energy overcool at all but the highest resolution. Our delayed cooling schemes result in overstrong feedback, destroying the disc. The mechanical feedback scheme is efficient at suppressing star formation, agrees well with the Kennicutt-Schmidt relation, and leads to converged star formation rates and galaxy morphologies with increasing resolution without fine-tuning any parameters. However, we find it difficult to produce outflows with high enough mass loading factors at all but the highest resolution, indicating either that we have oversimplified the evolution of unresolved SN remnants, require other stellar feedback processes to be included, and require a better star formation prescription or most likely some combination of these issues.

Supernova feedback in numerical simulations of galaxy formation: separating physics from numerics

NASA Astrophysics Data System (ADS)

Smith, Matthew C.; Sijacki, Debora; Shen, Sijing

2018-04-01

While feedback from massive stars exploding as supernovae (SNe) is thought to be one of the key ingredients regulating galaxy formation, theoretically it is still unclear how the available energy couples to the interstellar medium and how galactic scale outflows are launched. We present a novel implementation of six sub-grid SN feedback schemes in the moving-mesh code AREPO, including injections of thermal and/or kinetic energy, two parametrizations of delayed cooling feedback and a `mechanical' feedback scheme that injects the correct amount of momentum depending on the relevant scale of the SN remnant resolved. All schemes make use of individually time-resolved SN events. Adopting isolated disk galaxy setups at different resolutions, with the highest resolution runs reasonably resolving the Sedov-Taylor phase of the SN, we aim to find a physically motivated scheme with as few tunable parameters as possible. As expected, simple injections of energy overcool at all but the highest resolution. Our delayed cooling schemes result in overstrong feedback, destroying the disk. The mechanical feedback scheme is efficient at suppressing star formation, agrees well with the Kennicutt-Schmidt relation and leads to converged star formation rates and galaxy morphologies with increasing resolution without fine tuning any parameters. However, we find it difficult to produce outflows with high enough mass loading factors at all but the highest resolution, indicating either that we have oversimplified the evolution of unresolved SN remnants, require other stellar feedback processes to be included, require a better star formation prescription or most likely some combination of these issues.

A comparative verification of high resolution precipitation forecasts using model output statistics

NASA Astrophysics Data System (ADS)

van der Plas, Emiel; Schmeits, Maurice; Hooijman, Nicolien; Kok, Kees

2017-04-01

Verification of localized events such as precipitation has become even more challenging with the advent of high-resolution meso-scale numerical weather prediction (NWP). The realism of a forecast suggests that it should compare well against precipitation radar imagery with similar resolution, both spatially and temporally. Spatial verification methods solve some of the representativity issues that point verification gives rise to. In this study a verification strategy based on model output statistics is applied that aims to address both double penalty and resolution effects that are inherent to comparisons of NWP models with different resolutions. Using predictors based on spatial precipitation patterns around a set of stations, an extended logistic regression (ELR) equation is deduced, leading to a probability forecast distribution of precipitation for each NWP model, analysis and lead time. The ELR equations are derived for predictands based on areal calibrated radar precipitation and SYNOP observations. The aim is to extract maximum information from a series of precipitation forecasts, like a trained forecaster would. The method is applied to the non-hydrostatic model Harmonie (2.5 km resolution), Hirlam (11 km resolution) and the ECMWF model (16 km resolution), overall yielding similar Brier skill scores for the 3 post-processed models, but larger differences for individual lead times. Besides, the Fractions Skill Score is computed using the 3 deterministic forecasts, showing somewhat better skill for the Harmonie model. In other words, despite the realism of Harmonie precipitation forecasts, they only perform similarly or somewhat better than precipitation forecasts from the 2 lower resolution models, at least in the Netherlands.

Painting models

NASA Astrophysics Data System (ADS)

Baart, F.; Donchyts, G.; van Dam, A.; Plieger, M.

2015-12-01

The emergence of interactive art has blurred the line between electronic, computer graphics and art. Here we apply this art form to numerical models. Here we show how the transformation of a numerical model into an interactive painting can both provide insights and solve real world problems. The cases that are used as an example include forensic reconstructions, dredging optimization, barrier design. The system can be fed using any source of time varying vector fields, such as hydrodynamic models. The cases used here, the Indian Ocean (HYCOM), the Wadden Sea (Delft3D Curvilinear), San Francisco Bay (3Di subgrid and Delft3D Flexible Mesh), show that the method used is suitable for different time and spatial scales. High resolution numerical models become interactive paintings by exchanging their velocity fields with a high resolution (>=1M cells) image based flow visualization that runs in a html5 compatible web browser. The image based flow visualization combines three images into a new image: the current image, a drawing, and a uv + mask field. The advection scheme that computes the resultant image is executed in the graphics card using WebGL, allowing for 1M grid cells at 60Hz performance on mediocre graphic cards. The software is provided as open source software. By using different sources for a drawing one can gain insight into several aspects of the velocity fields. These aspects include not only the commonly represented magnitude and direction, but also divergence, topology and turbulence .

A 3-D Finite-Volume Non-hydrostatic Icosahedral Model (NIM)

NASA Astrophysics Data System (ADS)

Lee, Jin

2014-05-01

The Nonhydrostatic Icosahedral Model (NIM) formulates the latest numerical innovation of the three-dimensional finite-volume control volume on the quasi-uniform icosahedral grid suitable for ultra-high resolution simulations. NIM's modeling goal is to improve numerical accuracy for weather and climate simulations as well as to utilize the state-of-art computing architecture such as massive parallel CPUs and GPUs to deliver routine high-resolution forecasts in timely manner. NIM dynamic corel innovations include: * A local coordinate system remapped spherical surface to plane for numerical accuracy (Lee and MacDonald, 2009), * Grid points in a table-driven horizontal loop that allow any horizontal point sequence (A.E. MacDonald, et al., 2010), * Flux-Corrected Transport formulated on finite-volume operators to maintain conservative positive definite transport (J.-L, Lee, ET. Al., 2010), *Icosahedral grid optimization (Wang and Lee, 2011), * All differentials evaluated as three-dimensional finite-volume integrals around the control volume. The three-dimensional finite-volume solver in NIM is designed to improve pressure gradient calculation and orographic precipitation over complex terrain. NIM dynamical core has been successfully verified with various non-hydrostatic benchmark test cases such as internal gravity wave, and mountain waves in Dynamical Cores Model Inter-comparisons Projects (DCMIP). Physical parameterizations suitable for NWP are incorporated into NIM dynamical core and successfully tested with multimonth aqua-planet simulations. Recently, NIM has started real data simulations using GFS initial conditions. Results from the idealized tests as well as real-data simulations will be shown in the conference.

Numerical Algorithms Based on Biorthogonal Wavelets

NASA Technical Reports Server (NTRS)

Ponenti, Pj.; Liandrat, J.

1996-01-01

Wavelet bases are used to generate spaces of approximation for the resolution of bidimensional elliptic and parabolic problems. Under some specific hypotheses relating the properties of the wavelets to the order of the involved operators, it is shown that an approximate solution can be built. This approximation is then stable and converges towards the exact solution. It is designed such that fast algorithms involving biorthogonal multi resolution analyses can be used to resolve the corresponding numerical problems. Detailed algorithms are provided as well as the results of numerical tests on partial differential equations defined on the bidimensional torus.

Analysis of High Order Difference Methods for Multiscale Complex Compressible Flows

NASA Technical Reports Server (NTRS)

Sjoegreen, Bjoern; Yee, H. C.; Tang, Harry (Technical Monitor)

2002-01-01

Accurate numerical simulations of complex multiscale compressible viscous flows, especially high speed turbulence combustion and acoustics, demand high order schemes with adaptive numerical dissipation controls. Standard high resolution shock-capturing methods are too dissipative to capture the small scales and/or long-time wave propagations without extreme grid refinements and small time steps. An integrated approach for the control of numerical dissipation in high order schemes with incremental studies was initiated. Here we further refine the analysis on, and improve the understanding of the adaptive numerical dissipation control strategy. Basically, the development of these schemes focuses on high order nondissipative schemes and takes advantage of the progress that has been made for the last 30 years in numerical methods for conservation laws, such as techniques for imposing boundary conditions, techniques for stability at shock waves, and techniques for stable and accurate long-time integration. We concentrate on high order centered spatial discretizations and a fourth-order Runge-Kutta temporal discretizations as the base scheme. Near the bound-aries, the base scheme has stable boundary difference operators. To further enhance stability, the split form of the inviscid flux derivatives is frequently used for smooth flow problems. To enhance nonlinear stability, linear high order numerical dissipations are employed away from discontinuities, and nonlinear filters are employed after each time step in order to suppress spurious oscillations near discontinuities to minimize the smearing of turbulent fluctuations. Although these schemes are built from many components, each of which is well-known, it is not entirely obvious how the different components be best connected. For example, the nonlinear filter could instead have been built into the spatial discretization, so that it would have been activated at each stage in the Runge-Kutta time stepping. We could think of a mechanism that activates the split form of the equations only at some parts of the domain. Another issue is how to define good sensors for determining in which parts of the computational domain a certain feature should be filtered by the appropriate numerical dissipation. For the present study we employ a wavelet technique introduced in as sensors. Here, the method is briefly described with selected numerical experiments.

Joint numerical study of the 2011 Tohoku-Oki tsunami: comparative propagation simulations and high resolution coastal models

NASA Astrophysics Data System (ADS)

Loevenbruck, Anne; Arpaia, Luca; Ata, Riadh; Gailler, Audrey; Hayashi, Yutaka; Hébert, Hélène; Heinrich, Philippe; Le Gal, Marine; Lemoine, Anne; Le Roy, Sylvestre; Marcer, Richard; Pedreros, Rodrigo; Pons, Kevin; Ricchiuto, Mario; Violeau, Damien

2017-04-01

This study is part of the joint actions carried out within TANDEM (Tsunamis in northern AtlaNtic: Definition of Effects by Modeling). This French project, mainly dedicated to the appraisal of coastal effects due to tsunami waves on the French coastlines, was initiated after the catastrophic 2011 Tohoku-Oki tsunami. This event, which tragically struck Japan, drew the attention to the importance of tsunami risk assessment, in particular when nuclear facilities are involved. As a contribution to this challenging task, the TANDEM partners intend to provide guidance for the French Atlantic area based on numerical simulation. One of the identified objectives consists in designing, adapting and validating simulation codes for tsunami hazard assessment. Besides an integral benchmarking workpackage, the outstanding database of the 2011 event offers the TANDEM partners the opportunity to test their numerical tools with a real case. As a prerequisite, among the numerous published seismic source models arisen from the inversion of the various available records, a couple of coseismic slip distributions have been selected to provide common initial input parameters for the tsunami computations. After possible adaptations or specific developments, the different codes are employed to simulate the Tohoku-Oki tsunami from its source to the northeast Japanese coastline. The results are tested against the numerous tsunami measurements and, when relevant, comparisons of the different codes are carried out. First, the results related to the oceanic propagation phase are compared with the offshore records. Then, the modeled coastal impacts are tested against the onshore data. Flooding at a regional scale is considered, but high resolution simulations are also performed with some of the codes. They allow examining in detail the runup amplitudes and timing, as well as the complexity of the tsunami interaction with the coastal structures. The work is supported by the Tandem project in the frame of French PIA grant ANR-11-RSNR-00023.

RIO: a new computational framework for accurate initial data of binary black holes

NASA Astrophysics Data System (ADS)

Barreto, W.; Clemente, P. C. M.; de Oliveira, H. P.; Rodriguez-Mueller, B.

2018-06-01

We present a computational framework ( Rio) in the ADM 3+1 approach for numerical relativity. This work enables us to carry out high resolution calculations for initial data of two arbitrary black holes. We use the transverse conformal treatment, the Bowen-York and the puncture methods. For the numerical solution of the Hamiltonian constraint we use the domain decomposition and the spectral decomposition of Galerkin-Collocation. The nonlinear numerical code solves the set of equations for the spectral modes using the standard Newton-Raphson method, LU decomposition and Gaussian quadratures. We show the convergence of the Rio code. This code allows for easy deployment of large calculations. We show how the spin of one of the black holes is manifest in the conformal factor.

3D SPH numerical simulation of the wave generated by the Vajont rockslide

NASA Astrophysics Data System (ADS)

Vacondio, R.; Mignosa, P.; Pagani, S.

2013-09-01

A 3D numerical modeling of the wave generated by the Vajont slide, one of the most destructive ever occurred, is presented in this paper. A meshless Lagrangian Smoothed Particle Hydrodynamics (SPH) technique was adopted to simulate the highly fragmented violent flow generated by the falling slide in the artificial reservoir. The speed-up achievable via General Purpose Graphic Processing Units (GP-GPU) allowed to adopt the adequate resolution to describe the phenomenon. The comparison with the data available in literature showed that the results of the numerical simulation reproduce satisfactorily the maximum run-up, also the water surface elevation in the residual lake after the event. Moreover, the 3D velocity field of the flow during the event and the discharge hydrograph which overtopped the dam, were obtained.

A numerical and experimental comparison of human head phantoms for compliance testing of mobile telephone equipment.

PubMed

Christ, Andreas; Chavannes, Nicolas; Nikoloski, Neviana; Gerber, Hans-Ulrich; Poković, Katja; Kuster, Niels

2005-02-01

A new human head phantom has been proposed by CENELEC/IEEE, based on a large scale anthropometric survey. This phantom is compared to a homogeneous Generic Head Phantom and three high resolution anatomical head models with respect to specific absorption rate (SAR) assessment. The head phantoms are exposed to the radiation of a generic mobile phone (GMP) with different antenna types and a commercial mobile phone. The phones are placed in the standardized testing positions and operate at 900 and 1800 MHz. The average peak SAR is evaluated using both experimental (DASY3 near field scanner) and numerical (FDTD simulations) techniques. The numerical and experimental results compare well and confirm that the applied SAR assessment methods constitute a conservative approach.

Raman lidar for hydrogen gas concentration monitoring and future radioactive waste management.

PubMed

Liméry, Anasthase; Cézard, Nicolas; Fleury, Didier; Goular, Didier; Planchat, Christophe; Bertrand, Johan; Hauchecorne, Alain

2017-11-27

A multi-channel Raman lidar has been developed, allowing for the first time simultaneous and high-resolution profiling of hydrogen gas and water vapor. The lidar measures vibrational Raman scattering in the UV (355 nm) domain. It works in a high-bandwidth photon counting regime using fast SiPM detectors and takes into account the spectral overlap between hydrogen and water vapor Raman spectra. Measurement of concentration profiles of H 2 and H 2 O are demonstrated along a 5-meter-long open gas cell with 1-meter resolution at 85 meters. The instrument precision is investigated by numerical simulation to anticipate the potential performance at longer range. This lidar could find applications in the French project Cigéo for monitoring radioactive waste disposal cells.

Crisis DSM Generation To Support Refugee Camp Management

NASA Astrophysics Data System (ADS)

Gstaiger, Veronika; d'Angelo, Pablo; Schneiderhan, Tobais; Krauss, Thomas

2013-12-01

The extraction of high resolution surface information from satellite data has become an important area of research. One of the numerous fields of application is disaster management. Detailed information about the affected terrain is not only needed for analyses during the emergency relief phase, but also for reconstruction and prevention activities. In this paper the authors present the generation of a Digital Surface Model (DSM) based on three very high resolution optical satellite images. The DSM was produced to supplement a flood mapping activity in Jordan and serves as example for the implementation of scientific results during an emergency request. The flood affected the Zaatari refugee camp in Jordan and was mapped by the Center for Satellite Based Crisis Information (ZKI) at the German Aerospace Center (DLR) in January 2013 under emergency mapping conditions.

Formulation of image fusion as a constrained least squares optimization problem

PubMed Central

Dwork, Nicholas; Lasry, Eric M.; Pauly, John M.; Balbás, Jorge

2017-01-01

Abstract. Fusing a lower resolution color image with a higher resolution monochrome image is a common practice in medical imaging. By incorporating spatial context and/or improving the signal-to-noise ratio, it provides clinicians with a single frame of the most complete information for diagnosis. In this paper, image fusion is formulated as a convex optimization problem that avoids image decomposition and permits operations at the pixel level. This results in a highly efficient and embarrassingly parallelizable algorithm based on widely available robust and simple numerical methods that realizes the fused image as the global minimizer of the convex optimization problem. PMID:28331885

Fires in Chile

NASA Technical Reports Server (NTRS)

2002-01-01

On February 5, 2002, the dense smoke from numerous forest fires stretched out over the Pacific Ocean about 400 miles south of Santiago, Chile. This true-color Moderate-resolution Imaging Spectroradiometer (MODIS) image shows the fires, which are located near the city of Temuco. The fires are indicated with red dots (boxes in the high-resolution imagery). The fires were burning near several national parks and nature reserves in an area of the Chilean Andes where tourism is very popular. Southeast of the fires, the vegetation along the banks of the Rio Negro in Argentina stands out in dark green. Image courtesy Jacques Descloitres, MODIS Land Rapid Response Team at NASA GSFC

Modulating complex beams in amplitude and phase using fast tilt-micromirror arrays and phase masks.

PubMed

Roth, Matthias; Heber, Jörg; Janschek, Klaus

2018-06-15

The Letter proposes a system for the spatial modulation of light in amplitude and phase at kilohertz frame rates and high spatial resolution. The focus is fast spatial light modulators (SLMs) consisting of continuously tiltable micromirrors. We investigate the utilization of such SLMs in combination with a static phase mask in a 4f setup. The phase mask enables the complex beam modulation in a linear optical arrangement. Furthermore, adding so-called phase steps to the phase mask increases both the number of image pixels at constant SLM resolution and the optical efficiency. We illustrate our concept based on numerical simulations.

An Experimental High-Resolution Forecast System During the Vancouver 2010 Winter Olympic and Paralympic Games

NASA Astrophysics Data System (ADS)

Mailhot, J.; Milbrandt, J. A.; Giguère, A.; McTaggart-Cowan, R.; Erfani, A.; Denis, B.; Glazer, A.; Vallée, M.

2014-01-01

Environment Canada ran an experimental numerical weather prediction (NWP) system during the Vancouver 2010 Winter Olympic and Paralympic Games, consisting of nested high-resolution (down to 1-km horizontal grid-spacing) configurations of the GEM-LAM model, with improved geophysical fields, cloud microphysics and radiative transfer schemes, and several new diagnostic products such as density of falling snow, visibility, and peak wind gust strength. The performance of this experimental NWP system has been evaluated in these winter conditions over complex terrain using the enhanced mesoscale observing network in place during the Olympics. As compared to the forecasts from the operational regional 15-km GEM model, objective verification generally indicated significant added value of the higher-resolution models for near-surface meteorological variables (wind speed, air temperature, and dewpoint temperature) with the 1-km model providing the best forecast accuracy. Appreciable errors were noted in all models for the forecasts of wind direction and humidity near the surface. Subjective assessment of several cases also indicated that the experimental Olympic system was skillful at forecasting meteorological phenomena at high-resolution, both spatially and temporally, and provided enhanced guidance to the Olympic forecasters in terms of better timing of precipitation phase change, squall line passage, wind flow channeling, and visibility reduction due to fog and snow.

Full-field OCT: ex vivo and in vivo biological imaging applications

NASA Astrophysics Data System (ADS)

Grieve, Katharine; Dubois, Arnaud; Moneron, Gael; Guyot, Elvire; Boccara, Albert C.

2005-04-01

We present results of studies in embryology and ophthalmology performed using our ultrahigh-resolution full-field OCT system. We also discuss recent developments to our ultrashort acquisition time full-field optical coherence tomography system designed to allow in vivo biological imaging. Preliminary results of high-speed imaging in biological samples are presented. The core of the experimental setup is the Linnik interferometer, illuminated by a white light source. En face tomographic images are obtained in real-time without scanning by computing the difference of two phase-opposed interferometric images recorded by high-resolution CCD cameras. An isotropic spatial resolution of ~1 μm is achieved thanks to the short source coherence length and the use of high numerical aperture microscope objectives. A detection sensitivity of ~90 dB is obtained by means of image averaging and pixel binning. In ophthalmology, reconstructed xz images from rat ocular tissue are presented, where cellular-level structures in the retina are revealed, demonstrating the unprecedented resolution of our instrument. Three-dimensional reconstructions of the mouse embryo allowing the study of the establishment of the anterior-posterior axis are shown. Finally we present the first results of embryonic imaging using the new rapid acquisition full-field OCT system, which offers an acquisition time of 10 μs per frame.

Wave Dissipation over Nearshore Beach Morphology: Insights from High-Resolution LIDAR Observations and the SWASH Wave Model

NASA Astrophysics Data System (ADS)

Mulligan, R. P.; Gomes, E.; McNinch, J.; Brodie, K. L.

2016-02-01

Numerical modelling of the nearshore zone can be computationally intensive due to the complexity of wave breaking, and the need for high temporal and spatial resolution. In this study we apply the SWASH non-hydrostatic wave-flow model that phase-resolves the free surface and fluid motions in the water column at high resolution. The model is forced using observed directional energy spectra, and results are compared to wave observations during moderate storm events. Observations are collected outside the surf zone using acoustic wave and currents sensors, and inside the surf zone over a 100 m transect using high-resolution LIDAR measurements of the sea surface from a sensor mounted on a tower on the beach dune at the Field Research Facility in Duck, NC. The model is applied to four cases with different wave conditions and bathymetry, and used to predict the spatial variability in wave breaking, and correlation between energy dissipation and morphologic features. Model results compare well with observations of spectral evolution outside the surf zone, and with the remotely sensed observations of wave transformation inside the surf zone. The results indicate the importance of nearshore bars, rip-channels, and larger features (major scour depression under the pier following large waves from Hurricane Irene) on the location of wave breaking and alongshore variability in wave energy dissipation.

Highly Coarse-Grained Representations of Transmembrane Proteins

PubMed Central

2017-01-01

Numerous biomolecules and biomolecular complexes, including transmembrane proteins (TMPs), are symmetric or at least have approximate symmetries. Highly coarse-grained models of such biomolecules, aiming at capturing the essential structural and dynamical properties on resolution levels coarser than the residue scale, must preserve the underlying symmetry. However, making these models obey the correct physics is in general not straightforward, especially at the highly coarse-grained resolution where multiple (∼3–30 in the current study) amino acid residues are represented by a single coarse-grained site. In this paper, we propose a simple and fast method of coarse-graining TMPs obeying this condition. The procedure involves partitioning transmembrane domains into contiguous segments of equal length along the primary sequence. For the coarsest (lowest-resolution) mappings, it turns out to be most important to satisfy the symmetry in a coarse-grained model. As the resolution is increased to capture more detail, however, it becomes gradually more important to match modular repeats in the secondary structure (such as helix-loop repeats) instead. A set of eight TMPs of various complexity, functionality, structural topology, and internal symmetry, representing different classes of TMPs (ion channels, transporters, receptors, adhesion, and invasion proteins), has been examined. The present approach can be generalized to other systems possessing exact or approximate symmetry, allowing for reliable and fast creation of multiscale, highly coarse-grained mappings of large biomolecular assemblies. PMID:28043122

Unstructured mesh adaptivity for urban flooding modelling

NASA Astrophysics Data System (ADS)

Hu, R.; Fang, F.; Salinas, P.; Pain, C. C.

2018-05-01

Over the past few decades, urban floods have been gaining more attention due to their increase in frequency. To provide reliable flooding predictions in urban areas, various numerical models have been developed to perform high-resolution flood simulations. However, the use of high-resolution meshes across the whole computational domain causes a high computational burden. In this paper, a 2D control-volume and finite-element flood model using adaptive unstructured mesh technology has been developed. This adaptive unstructured mesh technique enables meshes to be adapted optimally in time and space in response to the evolving flow features, thus providing sufficient mesh resolution where and when it is required. It has the advantage of capturing the details of local flows and wetting and drying front while reducing the computational cost. Complex topographic features are represented accurately during the flooding process. For example, the high-resolution meshes around the buildings and steep regions are placed when the flooding water reaches these regions. In this work a flooding event that happened in 2002 in Glasgow, Scotland, United Kingdom has been simulated to demonstrate the capability of the adaptive unstructured mesh flooding model. The simulations have been performed using both fixed and adaptive unstructured meshes, and then results have been compared with those published 2D and 3D results. The presented method shows that the 2D adaptive mesh model provides accurate results while having a low computational cost.

Improved Visualization of Glaucomatous Retinal Damage Using High-speed Ultrahigh-Resolution Optical Coherence Tomography

PubMed Central

Mumcuoglu, Tarkan; Wollstein, Gadi; Wojtkowski, Maciej; Kagemann, Larry; Ishikawa, Hiroshi; Gabriele, Michelle L.; Srinivasan, Vivek; Fujimoto, James G.; Duker, Jay S.; Schuman, Joel S.

2009-01-01

Purpose To test if improving optical coherence tomography (OCT) resolution and scanning speed improves the visualization of glaucomatous structural changes as compared with conventional OCT. Design Prospective observational case series. Participants Healthy and glaucomatous subjects in various stages of disease. Methods Subjects were scanned at a single visit with commercially available OCT (StratusOCT) and high-speed ultrahigh-resolution (hsUHR) OCT. The prototype hsUHR OCT had an axial resolution of 3.4 μm (3 times higher than StratusOCT), with an A-scan rate of 24 000 hertz (60 times faster than StratusOCT). The fast scanning rate allowed the acquisition of novel scanning patterns such as raster scanning, which provided dense coverage of the retina and optic nerve head. Main Outcome Measures Discrimination of retinal tissue layers and detailed visualization of retinal structures. Results High-speed UHR OCT provided a marked improvement in tissue visualization as compared with StratusOCT. This allowed the identification of numerous retinal layers, including the ganglion cell layer, which is specifically prone to glaucomatous damage. Fast scanning and the enhanced A-scan registration properties of hsUHR OCT provided maps of the macula and optic nerve head with unprecedented detail, including en face OCT fundus images and retinal nerve fiber layer thickness maps. Conclusion High-speed UHR OCT improves visualization of the tissues relevant to the detection and management of glaucoma. PMID:17884170

Unravel the submesoscale dynamics of the phytoplanktonic community in the NW Mediterranean Sea by in situ observations: the 2015 OSCAHR cruise

NASA Astrophysics Data System (ADS)

Marrec, Pierre; Doglioli, Andrea M.; Grégori, Gérald; Della Penna, Alice; Wagener, Thibaut; Rougier, Gille; Bhairy, Nagib; Dugenne, Mathilde; Lahbib, Soumaya; Thyssen, Melilotus

2017-04-01

Submesoscale phenomena have been recently recognized as a key factor in physical-biological-biogeochemical interactions, even if it remains unclear how these processes affect the global state of the ocean. Significant large-scale impacts of submesoscale structures on primary production and influence on the phytoplankton community structure and diversity have also been reported. In the past decade submesoscale dynamics have been predominately studied through the analysis of numerical simulations. Observing the coupled physical and biogeochemical variability at this scale remains challenging due to the ephemeral nature of submesoscale structures. The in-situ study of such structures necessitates multidisciplinary approaches involving in situ observations, remote sensing and modeling. Last progresses in biogeochemical sensor development and advanced methodology including Lagrangian real-time adaptative strategies represent outstanding opportunities. The OSCAHR (Observing Submesoscale Coupling At High Resolution) campaign has been conducted thanks to a multidisciplinary approach in order to improve the understanding of submesoscale processes. An ephemeral submesoscale structure was first identified in the Ligurian Sea in fall 2015 using both satellite and numerical modeling data before the campaign. Afterwards, advanced observing systems for the physical, biological and biogeochemical characterization of the sea surface layer at a high spatial and temporal frequency were deployed during a 10-days cruise. A MVP (Moving Vessel Profiler) was used to obtain high resolution CTD profiles associated to a new pumping system with 1-m vertical resolution. Moreover, along the ship track, in addition to the standard measurements of seawater surface samples (Chl-a, nutrients, O2, SST, SSS …), we deployed an automated flow cytometer for near real-time characterization of phytoplankton functional groups (from micro-phytoplankton down to cyanobacteria). The observed submesoscale feature presented a cyclonic structure with a relatively cold core surrounded by warmer waters. Six phytoplankton groups were identified across the structure with an unprecedented spatial and temporal resolution. According to our observations, we could quantify the influence of the fast established physical structure on the spatial distribution of the phytoplankton functional groups, giving coherence to the observed community structuration. Moreover, the high resolution of our observations allows us to estimate the growth rate of the main phytoplankton groups. Our innovative adaptative strategy with a multidisciplinary and transversal approach provides a deeper understanding of the marine biogeochemical dynamics through the first trophic levels.

Tides and tsunamis

NASA Technical Reports Server (NTRS)

Zetler, B. D.

1972-01-01

Although tides and tsunamis are both shallow water waves, it does not follow that they are equally amenable to an observational program using an orbiting altimeter on a satellite. A numerical feasibility investigation using a hypothetical satellite orbit, real tide observations, and sequentially increased levels of white noise has been conducted to study the degradation of the tidal harmonic constants caused by adding noise to the tide data. Tsunami waves, possibly a foot high and one hundred miles long, must be measured in individual orbits, thus requiring high relative resolution.

FY16 NRL DoD High Performance Computing Modernization Program Annual Reports

DTIC Science & Technology

2017-09-15

explored both wind and wave forcing in the numerical wave tank. The model uses high spatial and temporal resolution and a multi-phase formulation to...Results: The ADVED_NS code was used to predict the effect of the standoff distance between micron- diameter wires and flow frequency on the total...contours for a flow over 3D wire mesh. Figure 2 shows verifications comparing computed and theoretical drag forces for the flow over two cylinders in an

H II REGIONS, EMBEDDED PROTOSTARS, AND STARLESS CORES IN SHARPLESS 2-157

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Chian-Chou; Williams, Jonathan P.; Pandian, Jagadheep D., E-mail: ccchen@ifa.hawaii.edu, E-mail: jpw@ifa.hawaii.edu, E-mail: jagadheep@iist.ac.in

2012-06-20

We present arcsecond resolution 1.4 mm observations of the high-mass star-forming region, Sharpless 2-157, that reveal the cool dust associated with the first stages of star formation. These data are compared with archival images at optical, infrared, and radio wavelengths, and complemented with new arcsecond resolution mid-infrared data. We identify a dusty young H II region, numerous infrared sources within the cluster envelope, and four starless condensations. Three of the cores lie in a line to the south of the cluster peak, but the most massive one is right at the center and associated with a jumble of bright radiomore » and infrared sources. This presents an interesting juxtaposition of high- and low-mass star formation within the same cluster which we compare with similar observations of other high-mass star-forming regions and discuss in the context of cluster formation theory.« less

Thin Shell, Segmented X-Ray Mirrors

NASA Technical Reports Server (NTRS)

Petre, Robert

2010-01-01

Thin foil mirrors were introduced as a means of achieving high throughput in an X-ray astronomical imaging system in applications for which high angular resolution were not necessary. Since their introduction, their high filling factor, modest mass, relative ease of construction, and modest cost have led to their use in numerous X-ray observatories, including the Broad Band X-ray Telescope, ASCA, and Suzaku. The introduction of key innovations, including epoxy replicated surfaces, multilayer coatings, and glass mirror substrates, has led to performance improvements, and in their becoming widely used for X-ray astronomical imaging at energies above 10 keV. The use of glass substrates has also led to substantial improvement in angular resolution, and thus their incorporation into the NASA concept for the International X-ray Observatory with a planned 3 in diameter aperture. This paper traces the development of foil mirrors from their inception in the 1970's through their current and anticipated future applications.

Higher sensitivity secondary ion mass spectrometry of biological molecules for high resolution, chemically specific imaging.

PubMed

McDonnell, Liam A; Heeren, Ron M A; de Lange, Robert P J; Fletcher, Ian W

2006-09-01

To expand the role of high spatial resolution secondary ion mass spectrometry (SIMS) in biological studies, numerous developments have been reported in recent years for enhancing the molecular ion yield of high mass molecules. These include both surface modification, including matrix-enhanced SIMS and metal-assisted SIMS, and polyatomic primary ions. Using rat brain tissue sections and a bismuth primary ion gun able to produce atomic and polyatomic primary ions, we report here how the sensitivity enhancements provided by these developments are additive. Combined surface modification and polyatomic primary ions provided approximately 15.8 times more signal than using atomic primary ions on the raw sample, whereas surface modification and polyatomic primary ions yield approximately 3.8 and approximately 8.4 times more signal. This higher sensitivity is used to generate chemically specific images of higher mass biomolecules using a single molecular ion peak.

High-resolution method for evolving complex interface networks

NASA Astrophysics Data System (ADS)

Pan, Shucheng; Hu, Xiangyu Y.; Adams, Nikolaus A.

2018-04-01

In this paper we describe a high-resolution transport formulation of the regional level-set approach for an improved prediction of the evolution of complex interface networks. The novelty of this method is twofold: (i) construction of local level sets and reconstruction of a global level set, (ii) local transport of the interface network by employing high-order spatial discretization schemes for improved representation of complex topologies. Various numerical test cases of multi-region flow problems, including triple-point advection, single vortex flow, mean curvature flow, normal driven flow, dry foam dynamics and shock-bubble interaction show that the method is accurate and suitable for a wide range of complex interface-network evolutions. Its overall computational cost is comparable to the Semi-Lagrangian regional level-set method while the prediction accuracy is significantly improved. The approach thus offers a viable alternative to previous interface-network level-set method.

MISTiC Winds, a Micro-Satellite Constellation Approach to High Resolution Observations of the Atmosphere Using Infrared Sounding and 3D Winds Measurements

NASA Technical Reports Server (NTRS)

Maschhoff, K. R.; Polizotti, J. J.; Aumann, H. H.; Susskind, J.

2016-01-01

MISTiC(TM) Winds is an approach to improve short-term weather forecasting based on a miniature high resolution, wide field, thermal emission spectrometry instrument that will provide global tropospheric vertical profiles of atmospheric temperature and humidity at high (3-4 km) horizontal and vertical ( 1 km) spatial resolution. MISTiCs extraordinarily small size, payload mass of less than 15 kg, and minimal cooling requirements can be accommodated aboard a 27U-class CubeSat or an ESPA-Class micro-satellite. Low fabrication and launch costs enable a LEO sunsynchronous sounding constellation that would collectively provide frequent IR vertical profiles and vertically resolved atmospheric motion vector wind observations in the troposphere. These observations are highly complementary to present and emerging environmental observing systems, and would provide a combination of high vertical and horizontal resolution not provided by any other environmental observing system currently in operation. The spectral measurements that would be provided by MISTiC Winds are similar to those of NASA's AIRS that was built by BAE Systems and operates aboard the AQUA satellite. These new observations, when assimilated into high resolution numerical weather models, would revolutionize short-term and severe weather forecasting, save lives, and support key economic decisions in the energy, air transport, and agriculture arenasat much lower cost than providing these observations from geostationary orbit. In addition, this observation capability would be a critical tool for the study of transport processes for water vapor, clouds, pollution, and aerosols. Key remaining technical risks are being reduced through laboratory and airborne testing under NASA's Instrument Incubator Program.

MISTiC Winds, a Micro-Satellite Constellation Approach to High Resolution Observations of the Atmosphere using Infrared Sounding and 3D Winds Measurements

NASA Astrophysics Data System (ADS)

Maschhoff, K. R.; Polizotti, J. J.; Susskind, J.; Aumann, H. H.

2015-12-01

MISTiCTM Winds is an approach to improve short-term weather forecasting based on a miniature high resolution, wide field, thermal emission spectrometry instrument that will provide global tropospheric vertical profiles of atmospheric temperature and humidity at high (3-4 km) horizontal and vertical ( 1 km) spatial resolution. MISTiC's extraordinarily small size, payload mass of less than 15 kg, and minimal cooling requirements can be accommodated aboard a 27U-class CubeSat or an ESPA-Class micro-satellite. Low fabrication and launch costs enable a LEO sun-synchronous sounding constellation that would collectively provide frequent IR vertical profiles and vertically resolved atmospheric motion vector wind observations in the troposphere. These observations are highly complementary to present and emerging environmental observing systems, and would provide a combination of high vertical and horizontal resolution not provided by any other environmental observing system currently in operation. The spectral measurements that would be provided by MISTiC Winds are similar to those of NASA's Atmospheric Infrared Sounder that was built by BAE Systems and operates aboard the AQUA satellite. These new observations, when assimilated into high resolution numerical weather models, would revolutionize short-term and severe weather forecasting, save lives, and support key economic decisions in the energy, air transport, and agriculture arenas-at much lower cost than providing these observations from geostationary orbit. In addition, this observation capability would be a critical tool for the study of transport processes for water vapor, clouds, pollution, and aerosols. Key technical risks are being reduced through laboratory and airborne testing under NASA's Instrument Incubator Program.

MISTiC Winds: A micro-satellite constellation approach to high resolution observations of the atmosphere using infrared sounding and 3D winds measurements

NASA Astrophysics Data System (ADS)

Maschhoff, K. R.; Polizotti, J. J.; Aumann, H. H.; Susskind, J.

2016-09-01

MISTiCTM Winds is an approach to improve short-term weather forecasting based on a miniature high resolution, wide field, thermal emission spectrometry instrument that will provide global tropospheric vertical profiles of atmospheric temperature and humidity at high (3-4 km) horizontal and vertical ( 1 km) spatial resolution. MISTiC's extraordinarily small size, payload mass of less than 15 kg, and minimal cooling requirements can be accommodated aboard a 27U-class CubeSat or an ESPA-Class micro-satellite. Low fabrication and launch costs enable a LEO sunsynchronous sounding constellation that would collectively provide frequent IR vertical profiles and vertically resolved atmospheric motion vector wind observations in the troposphere. These observations are highly complementary to present and emerging environmental observing systems, and would provide a combination of high vertical and horizontal resolution not provided by any other environmental observing system currently in operation. The spectral measurements that would be provided by MISTiC Winds are similar to those of NASA's AIRS that was built by BAE Systems and operates aboard the AQUA satellite. These new observations, when assimilated into high resolution numerical weather models, would revolutionize short-term and severe weather forecasting, save lives, and support key economic decisions in the energy, air transport, and agriculture arenas-at much lower cost than providing these observations from geostationary orbit. In addition, this observation capability would be a critical tool for the study of transport processes for water vapor, clouds, pollution, and aerosols. Key remaining technical risks are being reduced through laboratory and airborne testing under NASA's Instrument Incubator Program.

Mistic winds, a microsatellite constellation approach to high-resolution observations of the atmosphere using infrared sounding and 3d winds measurements

NASA Astrophysics Data System (ADS)

Maschhoff, K. R.; Polizotti, J. J.; Aumann, H. H.; Susskind, J.

2016-10-01

MISTiC Winds is an approach to improve short-term weather forecasting based on a miniature high resolution, wide field, thermal emission spectrometry instrument that will provide global tropospheric vertical profiles of atmospheric temperature and humidity at high (3-4 km) horizontal and vertical ( 1 km) spatial resolution. MISTiC's extraordinarily small size, payload mass of less than 15 kg, and minimal cooling requirements can be accommodated aboard a 27U-class CubeSat or an ESPA-Class micro-satellite. Low fabrication and launch costs enable a LEO sunsynchronous sounding constellation that would collectively provide frequent IR vertical profiles and vertically resolved atmospheric motion vector wind observations in the troposphere. These observations are highly complementary to present and emerging environmental observing systems, and would provide a combination of high vertical and horizontal resolution not provided by any other environmental observing system currently in operation. The spectral measurements that would be provided by MISTiC Winds are similar to those of NASA's AIRS that was built by BAE Systems and operates aboard the AQUA satellite. These new observations, when assimilated into high resolution numerical weather models, would revolutionize short-term and severe weather forecasting, save lives, and support key economic decisions in the energy, air transport, and agriculture arenas-at much lower cost than providing these observations from geostationary orbit. In addition, this observation capability would be a critical tool for the study of transport processes for water vapor, clouds, pollution, and aerosols. Key remaining technical risks are being reduced through laboratory and airborne testing under NASA's Instrument Incubator Program.

High Quality Data for Grid Integration Studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Clifton, Andrew; Draxl, Caroline; Sengupta, Manajit

As variable renewable power penetration levels increase in power systems worldwide, renewable integration studies are crucial to ensure continued economic and reliable operation of the power grid. The existing electric grid infrastructure in the US in particular poses significant limitations on wind power expansion. In this presentation we will shed light on requirements for grid integration studies as far as wind and solar energy are concerned. Because wind and solar plants are strongly impacted by weather, high-resolution and high-quality weather data are required to drive power system simulations. Future data sets will have to push limits of numerical weather predictionmore » to yield these high-resolution data sets, and wind data will have to be time-synchronized with solar data. Current wind and solar integration data sets are presented. The Wind Integration National Dataset (WIND) Toolkit is the largest and most complete grid integration data set publicly available to date. A meteorological data set, wind power production time series, and simulated forecasts created using the Weather Research and Forecasting Model run on a 2-km grid over the continental United States at a 5-min resolution is now publicly available for more than 126,000 land-based and offshore wind power production sites. The National Solar Radiation Database (NSRDB) is a similar high temporal- and spatial resolution database of 18 years of solar resource data for North America and India. The need for high-resolution weather data pushes modeling towards finer scales and closer synchronization. We also present how we anticipate such datasets developing in the future, their benefits, and the challenges with using and disseminating such large amounts of data.« less

Automated Approach to Very High-Order Aeroacoustic Computations. Revision

NASA Technical Reports Server (NTRS)

Dyson, Rodger W.; Goodrich, John W.

2001-01-01

Computational aeroacoustics requires efficient, high-resolution simulation tools. For smooth problems, this is best accomplished with very high-order in space and time methods on small stencils. However, the complexity of highly accurate numerical methods can inhibit their practical application, especially in irregular geometries. This complexity is reduced by using a special form of Hermite divided-difference spatial interpolation on Cartesian grids, and a Cauchy-Kowalewski recursion procedure for time advancement. In addition, a stencil constraint tree reduces the complexity of interpolating grid points that am located near wall boundaries. These procedures are used to develop automatically and to implement very high-order methods (> 15) for solving the linearized Euler equations that can achieve less than one grid point per wavelength resolution away from boundaries by including spatial derivatives of the primitive variables at each grid point. The accuracy of stable surface treatments is currently limited to 11th order for grid aligned boundaries and to 2nd order for irregular boundaries.

An Automated Approach to Very High Order Aeroacoustic Computations in Complex Geometries

NASA Technical Reports Server (NTRS)

Dyson, Rodger W.; Goodrich, John W.

2000-01-01

Computational aeroacoustics requires efficient, high-resolution simulation tools. And for smooth problems, this is best accomplished with very high order in space and time methods on small stencils. But the complexity of highly accurate numerical methods can inhibit their practical application, especially in irregular geometries. This complexity is reduced by using a special form of Hermite divided-difference spatial interpolation on Cartesian grids, and a Cauchy-Kowalewslci recursion procedure for time advancement. In addition, a stencil constraint tree reduces the complexity of interpolating grid points that are located near wall boundaries. These procedures are used to automatically develop and implement very high order methods (>15) for solving the linearized Euler equations that can achieve less than one grid point per wavelength resolution away from boundaries by including spatial derivatives of the primitive variables at each grid point. The accuracy of stable surface treatments is currently limited to 11th order for grid aligned boundaries and to 2nd order for irregular boundaries.

Exploring the nearshore marine wind profile from field measurements and numerical hindcast

NASA Astrophysics Data System (ADS)

del Jesus, F.; Menendez, M.; Guanche, R.; Losada, I.

2012-12-01

Wind power is the predominant offshore renewable energy resource. In the last years, offshore wind farms have become a technically feasible source of electrical power. The economic feasibility of offshore wind farms depends on the quality of the offshore wind conditions compared to that of onshore sites. Installation and maintenance costs must be balanced with more hours and a higher quality of the available resources. European offshore wind development has revealed that the optimum offshore sites are those in which the distance from the coast is limited with high available resource. Due to the growth in the height of the turbines and the complexity of the coast, with interactions between inland wind/coastal orography and ocean winds, there is a need for field measurements and validation of numerical models to understand the marine wind profile near the coast. Moreover, recent studies have pointed out that the logarithmic law describing the vertical wind profile presents limitations. The aim of this work is to characterize the nearshore vertical wind profile in the medium atmosphere boundary layer. Instrumental observations analyzed in this work come from the Idermar project (www.Idermar.es). Three floating masts deployed at different locations on the Cantabrian coast provide wind measurements from a height of 20 to 90 meters. Wind speed and direction are measured as well as several meteorological variables at different heights of the profile. The shortest wind time series has over one year of data. A 20 year high-resolution atmospheric hindcast, using the WRF-ARW model and focusing on hourly offshore wind fields, is also analyzed. Two datasets have been evaluated: a European reanalysis with a ~15 Km spatial resolution, and a hybrid downscaling of wind fields with a spatial resolution of one nautical mile over the northern coast of Spain.. These numerical hindcasts have been validated based on field measurement data. Several parameterizations of the vertical wind profile are evaluated and, based on this work, a particular parameterization of the wind profile is proposed.

Application of the MacCormack scheme to overland flow routing for high-spatial resolution distributed hydrological model

NASA Astrophysics Data System (ADS)

Zhang, Ling; Nan, Zhuotong; Liang, Xu; Xu, Yi; Hernández, Felipe; Li, Lianxia

2018-03-01

Although process-based distributed hydrological models (PDHMs) are evolving rapidly over the last few decades, their extensive applications are still challenged by the computational expenses. This study attempted, for the first time, to apply the numerically efficient MacCormack algorithm to overland flow routing in a representative high-spatial resolution PDHM, i.e., the distributed hydrology-soil-vegetation model (DHSVM), in order to improve its computational efficiency. The analytical verification indicates that both the semi and full versions of the MacCormack schemes exhibit robust numerical stability and are more computationally efficient than the conventional explicit linear scheme. The full-version outperforms the semi-version in terms of simulation accuracy when a same time step is adopted. The semi-MacCormack scheme was implemented into DHSVM (version 3.1.2) to solve the kinematic wave equations for overland flow routing. The performance and practicality of the enhanced DHSVM-MacCormack model was assessed by performing two groups of modeling experiments in the Mercer Creek watershed, a small urban catchment near Bellevue, Washington. The experiments show that DHSVM-MacCormack can considerably improve the computational efficiency without compromising the simulation accuracy of the original DHSVM model. More specifically, with the same computational environment and model settings, the computational time required by DHSVM-MacCormack can be reduced to several dozen minutes for a simulation period of three months (in contrast with one day and a half by the original DHSVM model) without noticeable sacrifice of the accuracy. The MacCormack scheme proves to be applicable to overland flow routing in DHSVM, which implies that it can be coupled into other PHDMs for watershed routing to either significantly improve their computational efficiency or to make the kinematic wave routing for high resolution modeling computational feasible.

Adaptive finite-volume WENO schemes on dynamically redistributed grids for compressible Euler equations

NASA Astrophysics Data System (ADS)

Pathak, Harshavardhana S.; Shukla, Ratnesh K.

2016-08-01

A high-order adaptive finite-volume method is presented for simulating inviscid compressible flows on time-dependent redistributed grids. The method achieves dynamic adaptation through a combination of time-dependent mesh node clustering in regions characterized by strong solution gradients and an optimal selection of the order of accuracy and the associated reconstruction stencil in a conservative finite-volume framework. This combined approach maximizes spatial resolution in discontinuous regions that require low-order approximations for oscillation-free shock capturing. Over smooth regions, high-order discretization through finite-volume WENO schemes minimizes numerical dissipation and provides excellent resolution of intricate flow features. The method including the moving mesh equations and the compressible flow solver is formulated entirely on a transformed time-independent computational domain discretized using a simple uniform Cartesian mesh. Approximations for the metric terms that enforce discrete geometric conservation law while preserving the fourth-order accuracy of the two-point Gaussian quadrature rule are developed. Spurious Cartesian grid induced shock instabilities such as carbuncles that feature in a local one-dimensional contact capturing treatment along the cell face normals are effectively eliminated through upwind flux calculation using a rotated Hartex-Lax-van Leer contact resolving (HLLC) approximate Riemann solver for the Euler equations in generalized coordinates. Numerical experiments with the fifth and ninth-order WENO reconstructions at the two-point Gaussian quadrature nodes, over a range of challenging test cases, indicate that the redistributed mesh effectively adapts to the dynamic flow gradients thereby improving the solution accuracy substantially even when the initial starting mesh is non-adaptive. The high adaptivity combined with the fifth and especially the ninth-order WENO reconstruction allows remarkably sharp capture of discontinuous propagating shocks with simultaneous resolution of smooth yet complex small scale unsteady flow features to an exceptional detail.

Numerical Modeling of Poroelastic-Fluid Systems Using High-Resolution Finite Volume Methods

NASA Astrophysics Data System (ADS)

Lemoine, Grady

Poroelasticity theory models the mechanics of porous, fluid-saturated, deformable solids. It was originally developed by Maurice Biot to model geophysical problems, such as seismic waves in oil reservoirs, but has also been applied to modeling living bone and other porous media. Poroelastic media often interact with fluids, such as in ocean bottom acoustics or propagation of waves from soft tissue into bone. This thesis describes the development and testing of high-resolution finite volume numerical methods, and simulation codes implementing these methods, for modeling systems of poroelastic media and fluids in two and three dimensions. These methods operate on both rectilinear grids and logically rectangular mapped grids. To allow the use of these methods, Biot's equations of poroelasticity are formulated as a first-order hyperbolic system with a source term; this source term is incorporated using operator splitting. Some modifications are required to the classical high-resolution finite volume method. Obtaining correct solutions at interfaces between poroelastic media and fluids requires a novel transverse propagation scheme and the removal of the classical second-order correction term at the interface, and in three dimensions a new wave limiting algorithm is also needed to correctly limit shear waves. The accuracy and convergence rates of the methods of this thesis are examined for a variety of analytical solutions, including simple plane waves, reflection and transmission of waves at an interface between different media, and scattering of acoustic waves by a poroelastic cylinder. Solutions are also computed for a variety of test problems from the computational poroelasticity literature, as well as some original test problems designed to mimic possible applications for the simulation code.

High-resolution modelling of atmospheric dispersion of dense gas using TWODEE-2.1: application to the 1986 Lake Nyos limnic eruption

NASA Astrophysics Data System (ADS)

Folch, Arnau; Barcons, Jordi; Kozono, Tomofumi; Costa, Antonio

2017-06-01

Atmospheric dispersal of a gas denser than air can threat the environment and surrounding communities if the terrain and meteorological conditions favour its accumulation in topographic depressions, thereby reaching toxic concentration levels. Numerical modelling of atmospheric gas dispersion constitutes a useful tool for gas hazard assessment studies, essential for planning risk mitigation actions. In complex terrains, microscale winds and local orographic features can have a strong influence on the gas cloud behaviour, potentially leading to inaccurate results if not captured by coarser-scale modelling. We introduce a methodology for microscale wind field characterisation based on transfer functions that couple a mesoscale numerical weather prediction model with a microscale computational fluid dynamics (CFD) model for the atmospheric boundary layer. The resulting time-dependent high-resolution microscale wind field is used as input for a shallow-layer gas dispersal model (TWODEE-2.1) to simulate the time evolution of CO2 gas concentration at different heights above the terrain. The strategy is applied to review simulations of the 1986 Lake Nyos event in Cameroon, where a huge CO2 cloud released by a limnic eruption spread downslopes from the lake, suffocating thousands of people and animals across the Nyos and adjacent secondary valleys. Besides several new features introduced in the new version of the gas dispersal code (TWODEE-2.1), we have also implemented a novel impact criterion based on the percentage of human fatalities depending on CO2 concentration and exposure time. New model results are quantitatively validated using the reported percentage of fatalities at several locations. The comparison with previous simulations that assumed coarser-scale steady winds and topography illustrates the importance of high-resolution modelling in complex terrains.

Comets

NASA Astrophysics Data System (ADS)

Festou, M. C.; Feldman, P. D.

Observations of comets obtained with the IUE satellite since its launch in 1978 are reviewed. The status of UV observation of comets prior to IUE is discussed, and particular attention is given to low-resolution UV spectroscopy of cometary comae, the detection of new species in the UV emission, high-dispersion spectroscopy, spatial mapping of the emissions, abundance determinations, and short-term variability. Diagrams, graphs, sample spectra, and tables of numerical data are provided.

Numerical Methods Using B-Splines

NASA Technical Reports Server (NTRS)

Shariff, Karim; Merriam, Marshal (Technical Monitor)

1997-01-01

The seminar will discuss (1) The current range of applications for which B-spline schemes may be appropriate (2) The property of high-resolution and the relationship between B-spline and compact schemes (3) Comparison between finite-element, Hermite finite element and B-spline schemes (4) Mesh embedding using B-splines (5) A method for the incompressible Navier-Stokes equations in curvilinear coordinates using divergence-free expansions.

Continuous and Discrete Structured Population Models with Applications to Epidemiology and Marine Mammals

NASA Astrophysics Data System (ADS)

Tang, Tingting

In this dissertation, we develop structured population models to examine how changes in the environmental affect population processes. In Chapter 2, we develop a general continuous time size structured model describing a susceptible-infected (SI) population coupled with the environment. This model applies to problems arising in ecology, epidemiology, and cell biology. The model consists of a system of quasilinear hyperbolic partial differential equations coupled with a system of nonlinear ordinary differential equations that represent the environment. We develop a second-order high resolution finite difference scheme to numerically solve the model. Convergence of this scheme to a weak solution with bounded total variation is proved. We numerically compare the second order high resolution scheme with a first order finite difference scheme. Higher order of convergence and high resolution property are observed in the second order finite difference scheme. In addition, we apply our model to a multi-host wildlife disease problem, questions regarding the impact of the initial population structure and transition rate within each host are numerically explored. In Chapter 3, we use a stage structured matrix model for wildlife population to study the recovery process of the population given an environmental disturbance. We focus on the time it takes for the population to recover to its pre-event level and develop general formulas to calculate the sensitivity or elasticity of the recovery time to changes in the initial population distribution, vital rates and event severity. Our results suggest that the recovery time is independent of the initial population size, but is sensitive to the initial population structure. Moreover, it is more sensitive to the reduction proportion to the vital rates of the population caused by the catastrophe event relative to the duration of impact of the event. We present the potential application of our model to the amphibian population dynamic and the recovery of a certain plant population. In addition, we explore, in details, the application of the model to the sperm whale population in Gulf of Mexico after the Deepwater Horizon oil spill. In Chapter 4, we summarize the results from Chapter 2 and Chapter 3 and explore some further avenues of our research.

Improved High Resolution Models of Subduction Dynamics: Use of transversely isotropic viscosity with a free-surface

NASA Astrophysics Data System (ADS)

Liu, X.; Gurnis, M.; Stadler, G.; Rudi, J.; Ratnaswamy, V.; Ghattas, O.

2017-12-01

Dynamic topography, or uncompensated topography, is controlled by internal dynamics, and provide constraints on the buoyancy structure and rheological parameters in the mantle. Compared with other surface manifestations such as the geoid, dynamic topography is very sensitive to shallower and more regional mantle structure. For example, the significant dynamic topography above the subduction zone potentially provides a rich mine for inferring the rheological and mechanical properties such as plate coupling, flow, and lateral viscosity variations, all critical in plate tectonics. However, employing subduction zone topography in the inversion study requires that we have a better understanding of the topography from forward models, especially the influence of the viscosity formulation, numerical resolution, and other factors. One common approach to formulating a fault between the subducted slab and the overriding plates in viscous flow models assumes a thin weak zone. However, due to the large lateral variation in viscosity, topography from free-slip numerical models typically has artificially large magnitude as well as high-frequency undulations over subduction zone, which adds to the difficulty in making comparisons between model results and observations. In this study, we formulate a weak zone with the transversely isotropic viscosity (TI) where the tangential viscosity is much smaller than the viscosity in the normal direction. Similar with isotropic weak zone models, TI models effectively decouple subducted slabs from the overriding plates. However, we find that the topography in TI models is largely reduced compared with that in weak zone models assuming an isotropic viscosity. Moreover, the artificial `tooth paste' squeezing effect observed in isotropic weak zone models vanishes in TI models, although the difference becomes less significant when the dip angle is small. We also implement a free-surface condition in our numerical models, which has a smoothing effect on the topography. With the improved model configuration, we can use the adjoint inversion method in a high-resolution model and employ topography in addition to other observables such as the plate motion to infer critical mechanical and rheological parameters in the subduction zone.

Intercomparison of numerical simulations, satellite altimetry and glider observations in the Algerian Basin during fall 2014 and 2015: focus on a SARAL/AltiKa track

NASA Astrophysics Data System (ADS)

Aulicino, Giuseppe; Cotroneo, Yuri; Ruiz, Simon; Sanchez Roman, Antonio; Pascual, Ananda; Fusco, Giannetta; Tintoré, Joaquin; Budillon, Giorgio

2017-04-01

The Algerian Basin is a key-place for the study of the general circulation of the Western Mediterranean Sea and its role in reaction to climate change. The presence of both fresh Atlantic waters and more saline resident Mediterranean ones characterizes the basin with an intense inflow/outflow regime and complex circulation patterns. Very energetic mesoscale structures, that evolve from meander of the Algerian Current to isolated cyclonic and anti-cyclonic eddies, dominate the area with marked repercussions on the biological activity. Despite their remarkable importance, this region and its variability are still poorly known and basin-wide high resolution knowledge of its mesoscale and sub-mesoscale features is still incomplete. The monitoring of such complex processes requires a synergic approach that involves integrated observing systems. In recent years, several studies proved the advantages of the combined use of autonomous underwater vehicles, such as gliders, with a new generation of satellite altimeters. In this context, we present the first results of a new integrated oceanographic observing system built up in the Algerian Basin during fall 2014 and 2015, aiming at advancing our knowledge on its main features. The study was realized through the analysis of glider high resolutions three-dimensional observations, collected along the Algerian BAsin Circulation Unmanned Survey (ABACUS) monitoring line, in synergy with co-located SARAL/AltiKa altimetric products and CMEMS numerical simulations. The achieved results confirm that glider derived dynamic height and SARAL/AltiKa absolute dynamic topography present similar patterns, with RMS of the differences ranging between 1.11 and 2.90 cm. Generally, the maximum discrepancies are located nearby the Balearic Islands and the Algerian Coast, but it is important to remark that the correlation coefficients seem to mostly depend on the synopticity between in situ and satellite measurements. Still, this study confirm that the numerical simulations derived from the analyzed CMEMS products agree well with the high resolution glider measurements and provide valuable information for multiplatform observatories that strongly complement in situ and remote sensed observations.

Observations and Modeling of Environmental and Human Damages by the 2004 Indian Ocean tsunami

NASA Astrophysics Data System (ADS)

Goto, K.; Imamura, F.; Koshimura, S.; Yanagisawa, H.

2008-05-01

On 26 December 2004, one of the largest tsunamis in human history (the 2004 Indian Ocean tsunami) struck coastal areas of countries surrounding the Indian Ocean, causing severe property damage and loss of life and causing us to think anew about the fearful consequences of a tsunami disaster. The tsunami devastated more than 10 countries around the ocean including Indonesia, Sri Lanka, India, and Thailand. Since its energy remains almost constant, the tsunami wave height grows tremendously in shallow water. It ranged in runups of ~48m on the western shore of Sumatra, ~18m in Thailand, and ~15m in Sri Lanka. The tsunami killed nearly 230,000 people, including visitors from foreign countries, resulting in great economic losses. The tsunami was also affected coastal environment at these countries and induced severe topographic change, and damages to the marine ecosystems as well as vegetations on land. Immediately following the tsunami, number of research teams has investigated damages of environment and human communities by tsunamis. Numerical analyses of tsunami propagation have also been carried out to understand the behavior and wave properties of tsunamis. However, there are few studies that focused on the integration of the field observations and numerical results, nevertheless that such analysis is critically important to evaluate the environmental and human damages by the tsunami. In this contribution, we first review damages to the environment and humans due to the 2004 Indian Ocean tsunami at Thailand, Indonesia, and Sri Lanka based on our field observations, and then we evaluate these damages based on high resolution numerical results. For example, we conducted field observation as well as high-resolution (17 m grid cells) numerical calculation for damages of corals (reef rocks) and mangroves at Pakarang Cape, Thailand. We found that hundreds of reef rocks were emplaced on the tidal bench, and 70 % of mangroves were destroyed at the cape. Our numerical results further clarified that these damages are well explained by the calculated hydraulic force of tsunamis. This kind of analysis that integrated the observation and numerical results is important to evaluate environmental and human damages quantitatively, and to make a future disaster prevention plan.

Modeling of digital information optical encryption system with spatially incoherent illumination

NASA Astrophysics Data System (ADS)

Bondareva, Alyona P.; Cheremkhin, Pavel A.; Krasnov, Vitaly V.; Rodin, Vladislav G.; Starikov, Rostislav S.; Starikov, Sergey N.

2015-10-01

State of the art micromirror DMD spatial light modulators (SLM) offer unprecedented framerate up to 30000 frames per second. This, in conjunction with high speed digital camera, should allow to build high speed optical encryption system. Results of modeling of digital information optical encryption system with spatially incoherent illumination are presented. Input information is displayed with first SLM, encryption element - with second SLM. Factors taken into account are: resolution of SLMs and camera, holograms reconstruction noise, camera noise and signal sampling. Results of numerical simulation demonstrate high speed (several gigabytes per second), low bit error rate and high crypto-strength.

Turbulence sources in mountain terrain: results from MATERHORN program

NASA Astrophysics Data System (ADS)

Di Sabatino, Silvana; Leo, Laura S.; Fernando, Harindra J. S.; Pardyjak, Eric R.; Hocut, Chris M.

2016-04-01

Improving high-resolution numerical weather prediction in complex terrain is essential for the many applications involving mountain weather. It is commonly recognized that high intensity weather phenomena near mountains are a safety hazard to aircrafts and unmanned aerial vehicles, but the prediction of highly variable weather is often unsatisfactory due to inadequacy of resolution or lack of the correct dynamics in the model. Improving mountain weather forecasts has been the goal of the interdisciplinary Mountain Terrain Atmospheric Modeling and Observations (MATERHORN) program (2011-2016). In this paper, we will report some of the findings focusing on several mechanisms of generating turbulence in near surface flows in the vicinity of an isolated mountain. Specifically, we will discuss nocturnal flows under low synoptic forcing. It has been demonstrated that such calm conditions are hard to predict in typical weather predictions models where forcing is dominated by local features that are poorly included in numerical models. It is found that downslope flows in calm and clear nights develop rapidly after sunset and usually persists for few hours. Owing to multiscale flow interactions, slope flows appear to be intermittent and disturbed, with a tendency to decay through the night yet periodically and unexpectedly generated. One of the interesting feature herein is the presence of oscillations that can be associated to different types of waves (e.g. internal and trapping waves) which may break to produce extra mixing. Pulsations of katabatic flow at critical internal-wave frequency, flow intrusions arriving from different topographies and shear layers of flow fanning out from the gaps all contribute to the weakly or intermittently turbulent state. Understanding of low frequency contributions to the total kinetic energy represent a step forward into modelling sub-grid effects in numerical models used for aviation applications.

Stress and deformation characteristics of sea ice in a high resolution numerical sea ice model.

NASA Astrophysics Data System (ADS)

Heorton, Harry; Feltham, Daniel; Tsamados, Michel

2017-04-01

The drift and deformation of sea ice floating on the polar oceans is due to the applied wind and ocean currents. The deformations of sea ice over ocean basin length scales have observable patterns; cracks and leads in satellite images and within the velocity fields generated from floe tracking. In a climate sea ice model the deformation of sea ice over ocean basin length scales is modelled using a rheology that represents the relationship between stresses and deformation within the sea ice cover. Here we investigate the link between observable deformation characteristics and the underlying internal sea ice stresses and force balance using the Los Alamos numerical sea ice climate model. In order to mimic laboratory experiments on the deformation of small cubes of sea ice we have developed an idealised square domain that tests the model response at spatial resolutions of up to 500m. We use the Elastic Anisotropic Plastic and Elastic Viscous Plastic rheologies, comparing their stability over varying resolutions and time scales. Sea ice within the domain is forced by idealised winds in order to compare the confinement of wind stresses and internal sea ice stresses. We document the characteristic deformation patterns of convergent, divergent and rotating stress states.

Subwavelength resolution from multilayered structure (Conference Presentation)

NASA Astrophysics Data System (ADS)

Cheng, Bo Han; Jen, Yi-Jun; Liu, Wei-Chih; Lin, Shan-wen; Lan, Yung-Chiang; Tsai, Din Ping

2016-10-01

Breaking optical diffraction limit is one of the most important issues needed to be overcome for the demand of high-density optoelectronic components. Here, a multilayered structure which consists of alternating semiconductor and dielectric layers for breaking optical diffraction limitation at THz frequency region are proposed and analyzed. We numerically demonstrate that such multilayered structure not only can act as a hyperbolic metamaterial but also a birefringence material via the control of the external temperature (or magnetic field). A practical approach is provided to control all the diffraction signals toward a specific direction by using transfer matrix method and effective medium theory. Numerical calculations and computer simulation (based on finite element method, FEM) are carried out, which agree well with each other. The temperature (or magnetic field) parameter can be tuned to create an effective material with nearly flat isofrequency feature to transfer (project) all the k-space signals excited from the object to be resolved to the image plane. Furthermore, this multilayered structure can resolve subwavelength structures at various incident THz light sources simultaneously. In addition, the resolution power for a fixed operating frequency also can be tuned by only changing the magnitude of external magnetic field. Such a device provides a practical route for multi-functional material, photolithography and real-time super-resolution image.

The impact of vertical resolution in mesoscale model AROME forecasting of radiation fog

NASA Astrophysics Data System (ADS)

Philip, Alexandre; Bergot, Thierry; Bouteloup, Yves; Bouyssel, François

2015-04-01

Airports short-term forecasting of fog has a security and economic impact. Numerical simulations have been performed with the mesoscale model AROME (Application of Research to Operations at Mesoscale) (Seity et al. 2011). Three vertical resolutions (60, 90 and 156 levels) are used to show the impact of radiation fog on numerical forecasting. Observations at Roissy Charles De Gaulle airport are compared to simulations. Significant differences in the onset, evolution and dissipation of fog were found. The high resolution simulation is in better agreement with observations than a coarser one. The surface boundary layer and incoming long-wave radiations are better represented. A more realistic behaviour of liquid water content evolution allows a better anticipation of low visibility procedures (ceiling < 60m and/or visibility < 600m). The case study of radiation fog shows that it is necessary to have a well defined vertical grid to better represent local phenomena. A statistical study over 6 months (October 2011 - March 2012 ) using different configurations was carried out. Statistically, results were the same as in the case study of radiation fog. Seity Y., P. Brousseau, S. Malardel, G. Hello, P. Bénard, F. Bouttier, C. Lac, V. Masson, 2011: The AROME-France convective scale operational model. Mon.Wea.Rev., 139, 976-991.

Numerical modeling of landslide-generated tsunami using adaptive unstructured meshes

NASA Astrophysics Data System (ADS)

Wilson, Cian; Collins, Gareth; Desousa Costa, Patrick; Piggott, Matthew

2010-05-01

Landslides impacting into or occurring under water generate waves, which can have devastating environmental consequences. Depending on the characteristics of the landslide the waves can have significant amplitude and potentially propagate over large distances. Linear models of classical earthquake-generated tsunamis cannot reproduce the highly nonlinear generation mechanisms required to accurately predict the consequences of landslide-generated tsunamis. Also, laboratory-scale experimental investigation is limited to simple geometries and short time-scales before wave reflections contaminate the data. Computational fluid dynamics models based on the nonlinear Navier-Stokes equations can simulate landslide-tsunami generation at realistic scales. However, traditional chessboard-like structured meshes introduce superfluous resolution and hence the computing power required for such a simulation can be prohibitively high, especially in three dimensions. Unstructured meshes allow the grid spacing to vary rapidly from high resolution in the vicinity of small scale features to much coarser, lower resolution in other areas. Combining this variable resolution with dynamic mesh adaptivity allows such high resolution zones to follow features like the interface between the landslide and the water whilst minimising the computational costs. Unstructured meshes are also better suited to representing complex geometries and bathymetries allowing more realistic domains to be simulated. Modelling multiple materials, like water, air and a landslide, on an unstructured adaptive mesh poses significant numerical challenges. Novel methods of interface preservation must be considered and coupled to a flow model in such a way that ensures conservation of the different materials. Furthermore this conservation property must be maintained during successive stages of mesh optimisation and interpolation. In this paper we validate a new multi-material adaptive unstructured fluid dynamics model against the well-known Lituya Bay landslide-generated wave experiment and case study [1]. In addition, we explore the effect of physical parameters, such as the shape, velocity and viscosity of the landslide, on wave amplitude and run-up, to quantify their influence on the landslide-tsunami hazard. As well as reproducing the experimental results, the model is shown to have excellent conservation and bounding properties. It also requires fewer nodes than an equivalent resolution fixed mesh simulation, therefore minimising at least one aspect of the computational cost. These computational savings are directly transferable to higher dimensions and some initial three dimensional results are also presented. These reproduce the experiments of DiRisio et al. [2], where an 80cm long landslide analogue was released from the side of an 8.9m diameter conical island in a 50 × 30m tank of water. The resulting impact between the landslide and the water generated waves with an amplitude of 1cm at wave gauges around the island. The range of scales that must be considered in any attempt to numerically reproduce this experiment makes it an ideal case study for our multi-material adaptive unstructured fluid dynamics model. [1] FRITZ, H. M., MOHAMMED, F., & YOO, J. 2009. Lituya Bay Landslide Impact Generated Mega-Tsunami 50th Anniversary. Pure and Applied Geophysics, 166(1), 153-175. [2] DIRISIO, M., DEGIROLAMO, P., BELLOTTI, G., PANIZZO, A., ARISTODEMO, F.,

Assessment of temperature and precipitation over Mediterranean Area and Black Sea with non hydrostatic high resolution regional climate model

NASA Astrophysics Data System (ADS)

Mercogliano, P.; Montesarchio, M.; Zollo, A.; Bucchignani, E.

2012-12-01

In the framework of the Italian GEMINA Project (program of expansion and development of the Euro-Mediterranean Center for Climate Change (CMCC), high resolution climate simulations have been performed, with the aim of furthering knowledge in the field of climate variability at regional scale, its causes and impacts. CMCC is a no profit centre whose aims are the promotion, research coordination and scientific activities in the field of climate changes. In this work, we show results of numerical simulation performed over a very wide area (13W-46E; 29-56N) at spatial resolution of 14 km, which includes all the Mediterranean Sea, using the regional climate model COSMO-CLM. It is a non-hydrostatic model for the simulation of atmospheric processes, developed by the DWD-Germany for weather forecast services; successively, the model has been updated by the CLM-Community, in order to develop climatic applications. It is the only documented numerical model system in Europe designed for spatial resolutions down to 1 km with a range of applicability encompassing operational numerical weather prediction, regional climate modelling the dispersion of trace gases and aerosol and idealised studies and applicable in all regions of the world for a wide range of available climate simulations from global climate and NWP models. Different reasons justify the development of a regional model: the first is the increasing number of works in literature asserting that regional models have also the features to provide more detailed description of the climate extremes, that are often more important then their mean values for natural and human systems. The second one is that high resolution modelling shows adequate features to provide information for impact assessment studies. At CMCC, regional climate modelling is a part of an integrated simulation system and it has been used in different European and African projects to provide qualitative and quantitative evaluation of the hydrogeological and public health risks. A simulation covering the period 1971-2000 and driven by ERA40 reanalysis has been performed, in order to assess the capability of the model to reproduce the present climate, with "perfect boundary conditions". A comparison, in terms of 2-metre temperature and precipitation, with EOBS dataset will be shown and discussed, in order to analyze the capabilities in simulating the main features of the observed climate over a wide area, at high spatial resolution. Then, a comparison between the results of COSMO-CLM driven by the global model CMCC-MED (whose atmospheric component is ECHAM5) and by ERA40 will be provided for a characterization of the errors induced by the global model. Finally, climate projections on the examined area for the XXI century, considering the RCP4.5 emission scenario for the future, will be provided. In this work a special emphasis will be issued to the analysis of the capability to reproduce not only the average climate patterns but also extremes of the present and future climate, in terms of temperature, precipitation and wind.

Coherence and diffraction limited resolution in microscopic OCT by a unified approach for the correction of dispersion and aberrations

NASA Astrophysics Data System (ADS)

Schulz-Hildebrandt, H.; Münter, Michael; Ahrens, M.; Spahr, H.; Hillmann, D.; König, P.; Hüttmann, G.

2018-03-01

Optical coherence tomography (OCT) images scattering tissues with 5 to 15 μm resolution. This is usually not sufficient for a distinction of cellular and subcellular structures. Increasing axial and lateral resolution and compensation of artifacts caused by dispersion and aberrations is required to achieve cellular and subcellular resolution. This includes defocus which limit the usable depth of field at high lateral resolution. OCT gives access the phase of the scattered light and hence correction of dispersion and aberrations is possible by numerical algorithms. Here we present a unified dispersion/aberration correction which is based on a polynomial parameterization of the phase error and an optimization of the image quality using Shannon's entropy. For validation, a supercontinuum light sources and a costume-made spectrometer with 400 nm bandwidth were combined with a high NA microscope objective in a setup for tissue and small animal imaging. Using this setup and computation corrections, volumetric imaging at 1.5 μm resolution is possible. Cellular and near cellular resolution is demonstrated in porcine cornea and the drosophila larva, when computational correction of dispersion and aberrations is used. Due to the excellent correction of the used microscope objective, defocus was the main contribution to the aberrations. In addition, higher aberrations caused by the sample itself were successfully corrected. Dispersion and aberrations are closely related artifacts in microscopic OCT imaging. Hence they can be corrected in the same way by optimization of the image quality. This way microscopic resolution is easily achieved in OCT imaging of static biological tissues.

Computation of Surface Laplacian for tri-polar ring electrodes on high-density realistic geometry head model.

PubMed

Junwei Ma; Han Yuan; Sunderam, Sridhar; Besio, Walter; Lei Ding

2017-07-01

Neural activity inside the human brain generate electrical signals that can be detected on the scalp. Electroencephalograph (EEG) is one of the most widely utilized techniques helping physicians and researchers to diagnose and understand various brain diseases. Due to its nature, EEG signals have very high temporal resolution but poor spatial resolution. To achieve higher spatial resolution, a novel tri-polar concentric ring electrode (TCRE) has been developed to directly measure Surface Laplacian (SL). The objective of the present study is to accurately calculate SL for TCRE based on a realistic geometry head model. A locally dense mesh was proposed to represent the head surface, where the local dense parts were to match the small structural components in TCRE. Other areas without dense mesh were used for the purpose of reducing computational load. We conducted computer simulations to evaluate the performance of the proposed mesh and evaluated possible numerical errors as compared with a low-density model. Finally, with achieved accuracy, we presented the computed forward lead field of SL for TCRE for the first time in a realistic geometry head model and demonstrated that it has better spatial resolution than computed SL from classic EEG recordings.

Absolute single-photoionization cross sections of Se 2 + : Experiment and theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Macaluso, D. A.; Aguilar, A.; Kilcoyne, A. L. D.

2015-12-28

Absolute single-photoionization cross-section measurements for Se 2+ ions were performed at the Advanced Light Source at Lawrence Berkeley National Laboratory using the merged-beams photo-ion technique. Measurements were made at a photon energy resolution of 24 ± 3 meV in the photon energy range 23.5-42.5 eV, spanning the ground state and low-lying metastable state ionization thresholds. Here, to clearly resolve the resonant structure near the ground-state threshold, high-resolution measurements were made from 30.0 to 31.9 eV at a photon energy resolution of 6.7 ± 0.7 meV. Numerous resonance features observed in the experimental spectra are assigned and their energies and quantummore » defects tabulated. The high-resolution cross-section measurements are compared with large-scale, state-of-the-art theoretical cross-section calculations obtained from the Dirac Coulomb R -matrix method. Suitable agreement is obtained over the entire photon energy range investigated. In conclusion, these results are an experimental determination of the absolute photoionization cross section of doubly ionized selenium and include a detailed analysis of the photoionization resonance spectrum of this ion.« less

High-resolution analysis of the mechanical behavior of tissue

NASA Astrophysics Data System (ADS)

Hudnut, Alexa W.; Armani, Andrea M.

2017-06-01

The mechanical behavior and properties of biomaterials, such as tissue, have been directly and indirectly connected to numerous malignant physiological states. For example, an increase in the Young's Modulus of tissue can be indicative of cancer. Due to the heterogeneity of biomaterials, it is extremely important to perform these measurements using whole or unprocessed tissue because the tissue matrix contains important information about the intercellular interactions and the structure. Thus, developing high-resolution approaches that can accurately measure the elasticity of unprocessed tissue samples is of great interest. Unfortunately, conventional elastography methods such as atomic force microscopy, compression testing, and ultrasound elastography either require sample processing or have poor resolution. In the present work, we demonstrate the characterization of unprocessed salmon muscle using an optical polarimetric elastography system. We compare the results of compression testing within different samples of salmon skeletal muscle with different numbers of collagen membranes to characterize differences in heterogeneity. Using the intrinsic collagen membranes as markers, we determine the resolution of the system when testing biomaterials. The device reproducibly measures the stiffness of the tissues at variable strains. By analyzing the amount of energy lost by the sample during compression, collagen membranes that are 500 μm in size are detected.

Solid immersion terahertz imaging with sub-wavelength resolution

NASA Astrophysics Data System (ADS)

Chernomyrdin, Nikita V.; Schadko, Aleksander O.; Lebedev, Sergey P.; Tolstoguzov, Viktor L.; Kurlov, Vladimir N.; Reshetov, Igor V.; Spektor, Igor E.; Skorobogatiy, Maksim; Yurchenko, Stanislav O.; Zaytsev, Kirill I.

2017-05-01

We have developed a method of solid immersion THz imaging—a non-contact technique employing the THz beam focused into evanescent-field volume and allowing strong reduction in the dimensions of THz caustic. We have combined numerical simulations and experimental studies to demonstrate a sub-wavelength 0.35λ0-resolution of the solid immersion THz imaging system compared to 0.85λ0-resolution of a standard imaging system, employing only an aspherical singlet. We have discussed the prospective of using the developed technique in various branches of THz science and technology, namely, for THz measurements of solid-state materials featuring sub-wavelength variations of physical properties, for highly accurate mapping of healthy and pathological tissues in THz medical diagnosis, for detection of sub-wavelength defects in THz non-destructive sensing, and for enhancement of THz nonlinear effects.

Coherent total internal reflection dark-field microscopy: label-free imaging beyond the diffraction limit.

PubMed

von Olshausen, Philipp; Rohrbach, Alexander

2013-10-15

Coherent imaging is barely applicable in life-science microscopy due to multiple interference artifacts. Here, we show how these interferences can be used to improve image resolution and contrast. We present a dark-field microscopy technique with evanescent illumination via total internal reflection that delivers high-contrast images of coherently scattering samples. By incoherent averaging of multiple coherent images illuminated from different directions we can resolve image structures that remain unresolved by conventional (incoherent) fluorescence microscopy. We provide images of 190 nm beads revealing resolution beyond the diffraction limit and slightly increased object distances. An analytical model is introduced that accounts for the observed effects and which is confirmed by numerical simulations. Our approach may be a route to fast, label-free, super-resolution imaging in live-cell microscopy.

Sub-radian-accuracy gravitational waveforms of coalescing binary neutron stars in numerical relativity

NASA Astrophysics Data System (ADS)

Kiuchi, Kenta; Kawaguchi, Kyohei; Kyutoku, Koutarou; Sekiguchi, Yuichiro; Shibata, Masaru; Taniguchi, Keisuke

2017-10-01

Extending our previous studies, we perform high-resolution simulations of inspiraling binary neutron stars in numerical relativity. We thoroughly carry through a convergence study in our currently available computational resources with the smallest grid spacing of ≈63 - 86 meter for the neutron-star radius 10.9-13.7 km. The estimated total error in the gravitational-wave phase is of order 0.1 rad for the total phase of ≳210 rad in the last ˜15 - 16 inspiral orbits. We then compare the waveforms (without resolution extrapolation) with those calculated by the latest effective-one-body formalism (tidal SEOBv2 model referred to as TEOB model). We find that for any of our models of binary neutron stars, the waveforms calculated by the TEOB formalism agree with the numerical-relativity waveforms up to ≈3 ms before the peak of the gravitational-wave amplitude is reached: For this late inspiral stage, the total phase error is ≲0.1 rad . Although the gravitational waveforms have an inspiral-type feature for the last ˜3 ms , this stage cannot be well reproduced by the current TEOB formalism, in particular, for neutron stars with large tidal deformability (i.e., lager radius). The reason for this is described.

Enhanced linear-array photoacoustic beamforming using modified coherence factor.

PubMed

Mozaffarzadeh, Moein; Yan, Yan; Mehrmohammadi, Mohammad; Makkiabadi, Bahador

2018-02-01

Photoacoustic imaging (PAI) is a promising medical imaging modality providing the spatial resolution of ultrasound imaging and the contrast of optical imaging. For linear-array PAI, a beamformer can be used as the reconstruction algorithm. Delay-and-sum (DAS) is the most prevalent beamforming algorithm in PAI. However, using DAS beamformer leads to low-resolution images as well as high sidelobes due to nondesired contribution of off-axis signals. Coherence factor (CF) is a weighting method in which each pixel of the reconstructed image is weighted, based on the spatial spectrum of the aperture, to mainly improve the contrast. We demonstrate that the numerator of the formula of CF contains a DAS algebra and propose the use of a delay-multiply-and-sum beamformer instead of the available DAS on the numerator. The proposed weighting technique, modified CF (MCF), has been evaluated numerically and experimentally compared to CF. It was shown that MCF leads to lower sidelobes and better detectable targets. The quantitative results of the experiment (using wire targets) show that MCF leads to for about 45% and 40% improvement, in comparison with CF, in the terms of signal-to-noise ratio and full-width-half-maximum, respectively. (2018) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

Quantifying Turbulent Kinetic Energy in an Aortic Coarctation with Large Eddy Simulation and Magnetic Resonance Imaging

NASA Astrophysics Data System (ADS)

Lantz, Jonas; Ebbers, Tino; Karlsson, Matts

2012-11-01

In this study, turbulent kinetic energy (TKE) in an aortic coarctation was studied using both a numerical technique (large eddy simulation, LES) and in vivo measurements using magnetic resonance imaging (MRI). High levels of TKE are undesirable, as kinetic energy is extracted from the mean flow to feed the turbulent fluctuations. The patient underwent surgery to widen the coarctation, and the flow before and after surgery was computed and compared to MRI measurements. The resolution of the MRI was about 7 × 7 voxels in axial cross-section while 50x50 mesh cells with increased resolution near the walls was used in the LES simulation. In general, the numerical simulations and MRI measurements showed that the aortic arch had no or very low levels of TKE, while elevated values were found downstream the coarctation. It was also found that TKE levels after surgery were lowered, indicating that the diameter of the constriction was increased enough to decrease turbulence effects. In conclusion, both the numerical simulation and MRI measurements gave very similar results, thereby validating the simulations and suggesting that MRI measured TKE can be used as an initial estimation in clinical practice, while LES results can be used for detailed quantification and further research of aortic flows.

Revisiting the Rossby Haurwitz wave test case with contour advection

NASA Astrophysics Data System (ADS)

Smith, Robert K.; Dritschel, David G.

2006-09-01

This paper re-examines a basic test case used for spherical shallow-water numerical models, and underscores the need for accurate, high resolution models of atmospheric and ocean dynamics. The Rossby-Haurwitz test case, first proposed by Williamson et al. [D.L. Williamson, J.B. Drake, J.J. Hack, R. Jakob, P.N. Swarztrauber, A standard test set for numerical approximations to the shallow-water equations on the sphere, J. Comput. Phys. (1992) 221-224], has been examined using a wide variety of shallow-water models in previous papers. Here, two contour-advective semi-Lagrangian (CASL) models are considered, and results are compared with previous test results. We go further by modifying this test case in a simple way to initiate a rapid breakdown of the basic wave state. This breakdown is accompanied by the formation of sharp potential vorticity gradients (fronts), placing far greater demands on the numerics than the original test case does. We also go further by examining other dynamical fields besides the height and potential vorticity, to assess how well the models deal with gravity waves. Such waves are sensitive to the presence or not of sharp potential vorticity gradients, as well as to numerical parameter settings. In particular, large time steps (convenient for semi-Lagrangian schemes) can seriously affect gravity waves but can also have an adverse impact on the primary fields of height and velocity. These problems are exacerbated by a poor resolution of potential vorticity gradients.

Double-Stage Delay Multiply and Sum Beamforming Algorithm: Application to Linear-Array Photoacoustic Imaging.

PubMed

Mozaffarzadeh, Moein; Mahloojifar, Ali; Orooji, Mahdi; Adabi, Saba; Nasiriavanaki, Mohammadreza

2018-01-01

Photoacoustic imaging (PAI) is an emerging medical imaging modality capable of providing high spatial resolution of Ultrasound (US) imaging and high contrast of optical imaging. Delay-and-Sum (DAS) is the most common beamforming algorithm in PAI. However, using DAS beamformer leads to low resolution images and considerable contribution of off-axis signals. A new paradigm namely delay-multiply-and-sum (DMAS), which was originally used as a reconstruction algorithm in confocal microwave imaging, was introduced to overcome the challenges in DAS. DMAS was used in PAI systems and it was shown that this algorithm results in resolution improvement and sidelobe degrading. However, DMAS is still sensitive to high levels of noise, and resolution improvement is not satisfying. Here, we propose a novel algorithm based on DAS algebra inside DMAS formula expansion, double stage DMAS (DS-DMAS), which improves the image resolution and levels of sidelobe, and is much less sensitive to high level of noise compared to DMAS. The performance of DS-DMAS algorithm is evaluated numerically and experimentally. The resulted images are evaluated qualitatively and quantitatively using established quality metrics including signal-to-noise ratio (SNR), full-width-half-maximum (FWHM) and contrast ratio (CR). It is shown that DS-DMAS outperforms DAS and DMAS at the expense of higher computational load. DS-DMAS reduces the lateral valley for about 15 dB and improves the SNR and FWHM better than 13% and 30%, respectively. Moreover, the levels of sidelobe are reduced for about 10 dB in comparison with those in DMAS.

The Ship Tethered Aerostat Remote Sensing System (STARRS): Observations of Small-Scale Surface Lateral Transport During the LAgrangian Submesoscale ExpeRiment (LASER)

NASA Astrophysics Data System (ADS)

Carlson, D. F.; Novelli, G.; Guigand, C.; Özgökmen, T.; Fox-Kemper, B.; Molemaker, M. J.

2016-02-01

The Consortium for Advanced Research on the Transport of Hydrocarbon in the Environment (CARTHE) will carry out the LAgrangian Submesoscale ExpeRiment (LASER) to study the role of small-scale processes in the transport and dispersion of oil and passive tracers. The Ship-Tethered Aerostat Remote Sensing System (STARRS) will observe small-scale surface dispersion in the open ocean. STARRS is built around a high-lift-capacity (30 kg) helium-filled aerostat. STARRS is equipped with a high resolution digital camera. An integrated GNSS receiver and inertial navigation system permit direct geo-rectification of the imagery. Consortium for Advanced Research on the Transport of Hydrocarbon in the Environment (CARTHE) will carry out the LAgrangian Submesoscale ExpeRiment (LASER) to study the role of small-scale processes in the transport and dispersion of oil and passive tracers. The Ship-Tethered Aerostat Remote Sensing System (STARRS) was developed to produce observational estimates of small-scale surface dispersion in the open ocean. STARRS is built around a high-lift-capacity (30 kg) helium-filled aerostat. STARRS is equipped with a high resolution digital camera. An integrated GNSS receiver and inertial navigation system permit direct geo-rectification of the imagery. Thousands of drift cards deployed in the field of view of STARRS and tracked over time provide the first observational estimates of small-scale (1-500 m) surface dispersion in the open ocean. The STARRS imagery will be combined with GPS-tracked surface drifter trajectories, shipboard observations, and aerial surveys of sea surface temperature in the DeSoto Canyon. In addition to obvious applications to oil spill modelling, the STARRS observations will provide essential benchmarks for high resolution numerical modelsDrift cards deployed in the field of view of STARRS and tracked over time provide the first observational estimates of small-scale (1-100 m) surface dispersion in the open ocean. The STARRS imagery will be combined with GPS-tracked surface drifter trajectories, shipboard observations, and aerial surveys of sea surface temperature in the DeSoto Canyon. In addition to obvious applications to oil spill modelling, the STARRS observations will provide essential benchmarks for high resolution numerical models

Superconducting High Resolution Fast-Neutron Spectrometers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hau, Ionel Dragos

2006-01-01

Superconducting high resolution fast-neutron calorimetric spectrometers based on 6LiF and TiB{sub 2} absorbers have been developed. These novel cryogenic spectrometers measure the temperature rise produced in exothermal (n, α) reactions with fast neutrons in 6Li and 10B-loaded materials with heat capacity C operating at temperatures T close to 0.1 K. Temperature variations on the order of 0.5 mK are measured with a Mo/Cu thin film multilayer operated in the transition region between its superconducting and its normal state. The advantage of calorimetry for high resolution spectroscopy is due to the small phonon excitation energies k BT on the order ofmore » μeV that serve as signal carriers, resulting in an energy resolution ΔE ~ (k BT 2C) 1/2, which can be well below 10 keV. An energy resolution of 5.5 keV has been obtained with a Mo/Cu superconducting sensor and a TiB 2 absorber using thermal neutrons from a 252Cf neutron source. This resolution is sufficient to observe the effect of recoil nuclei broadening in neutron spectra, which has been related to the lifetime of the first excited state in 7Li. Fast-neutron spectra obtained with a 6Li-enriched LiF absorber show an energy resolution of 16 keV FWHM, and a response in agreement with the 6Li(n, α) 3H reaction cross section and Monte Carlo simulations for energies up to several MeV. The energy resolution of order of a few keV makes this novel instrument applicable to fast-neutron transmission spectroscopy based on the unique elemental signature provided by the neutron absorption and scattering resonances. The optimization of the energy resolution based on analytical and numerical models of the detector response is discussed in the context of these applications.« less

Resolution power in digital in-line holography

NASA Astrophysics Data System (ADS)

Garcia-Sucerquia, J.; Xu, W.; Jericho, S. K.; Jericho, M. H.; Klages, P.; Kreuzer, H. J.

2006-01-01

Digital in-line holographic microscopy (DIHM) can achieve wavelength resolution both laterally and in depth with the simple optical setup consisting of a laser illuminating a wavelength-sized pinhole and a CCD camera for recording the hologram. The reconstruction is done numerically on the basis of the Kirchhoff-Helmholtz transform which yields a three-dimensional image of the objects throughout the sample volume. Resolution in DIHM depends on several controllable factors or parameters: (1) pinhole size controlling spatial coherence, (2) numerical aperture given by the size and positioning of the recording CCD chip, (3) pixel density and dynamic range controlling fringe resolution and noise level in the hologram and (4) wavelength. We present a detailed study of the individual and combined effects of these factors by doing an analytical analysis coupled with numerical simulations of holograms and their reconstruction. The result of this analysis is a set of criteria, also in the form of graphs, which can be used for the optimum design of the DIHM setup. We will also present a series of experimental results that test and confirm our theoretical analysis. The ultimate resolution to date is the imaging of the motion of submicron spheres and bacteria, a few microns apart, with speeds of hundreds of microns per second.

High-speed Fourier ptychographic microscopy based on programmable annular illuminations.

PubMed

Sun, Jiasong; Zuo, Chao; Zhang, Jialin; Fan, Yao; Chen, Qian

2018-05-16

High-throughput quantitative phase imaging (QPI) is essential to cellular phenotypes characterization as it allows high-content cell analysis and avoids adverse effects of staining reagents on cellular viability and cell signaling. Among different approaches, Fourier ptychographic microscopy (FPM) is probably the most promising technique to realize high-throughput QPI by synthesizing a wide-field, high-resolution complex image from multiple angle-variably illuminated, low-resolution images. However, the large dataset requirement in conventional FPM significantly limits its imaging speed, resulting in low temporal throughput. Moreover, the underlying theoretical mechanism as well as optimum illumination scheme for high-accuracy phase imaging in FPM remains unclear. Herein, we report a high-speed FPM technique based on programmable annular illuminations (AIFPM). The optical-transfer-function (OTF) analysis of FPM reveals that the low-frequency phase information can only be correctly recovered if the LEDs are precisely located at the edge of the objective numerical aperture (NA) in the frequency space. By using only 4 low-resolution images corresponding to 4 tilted illuminations matching a 10×, 0.4 NA objective, we present the high-speed imaging results of in vitro Hela cells mitosis and apoptosis at a frame rate of 25 Hz with a full-pitch resolution of 655 nm at a wavelength of 525 nm (effective NA = 0.8) across a wide field-of-view (FOV) of 1.77 mm 2 , corresponding to a space-bandwidth-time product of 411 megapixels per second. Our work reveals an important capability of FPM towards high-speed high-throughput imaging of in vitro live cells, achieving video-rate QPI performance across a wide range of scales, both spatial and temporal.

Parameter uncertainty in simulations of extreme precipitation and attribution studies.

NASA Astrophysics Data System (ADS)

Timmermans, B.; Collins, W. D.; O'Brien, T. A.; Risser, M. D.

2017-12-01

The attribution of extreme weather events, such as heavy rainfall, to anthropogenic influence involves the analysis of their probability in simulations of climate. The climate models used however, such as the Community Atmosphere Model (CAM), employ approximate physics that gives rise to "parameter uncertainty"—uncertainty about the most accurate or optimal values of numerical parameters within the model. In particular, approximate parameterisations for convective processes are well known to be influential in the simulation of precipitation extremes. Towards examining the impact of this source of uncertainty on attribution studies, we investigate the importance of components—through their associated tuning parameters—of parameterisations relating to deep and shallow convection, and cloud and aerosol microphysics in CAM. We hypothesise that as numerical resolution is increased the change in proportion of variance induced by perturbed parameters associated with the respective components is consistent with the decreasing applicability of the underlying hydrostatic assumptions. For example, that the relative influence of deep convection should diminish as resolution approaches that where convection can be resolved numerically ( 10 km). We quantify the relationship between the relative proportion of variance induced and numerical resolution by conducting computer experiments that examine precipitation extremes over the contiguous U.S. In order to mitigate the enormous computational burden of running ensembles of long climate simulations, we use variable-resolution CAM and employ both extreme value theory and surrogate modelling techniques ("emulators"). We discuss the implications of the relationship between parameterised convective processes and resolution both in the context of attribution studies and progression towards models that fully resolve convection.

Contact microspherical nanoscopy: from fundamentals to biomedical applications

NASA Astrophysics Data System (ADS)

Astratov, V. N.; Maslov, A. V.; Brettin, A.; Blanchette, K. F.; Nesmelov, Y. E.; Limberopoulos, N. I.; Walker, D. E.; Urbas, A. M.

2017-02-01

The mechanisms of super-resolution imaging by contact microspherical or microcylindrical nanoscopy remain an enigmatic question since these lenses neither have an ability to amplify the near-fields like in the case of far-field superlens, nor they have a hyperbolic dispersion similar to hyperlenses. In this work, we present results along two lines. First, we performed numerical modeling of super-resolution properties of two-dimensional (2-D) circular lens in the limit of wavelength-scale diameters, λ <= D <= 2λ, and relatively high indices of refraction, n=2. Our preliminary results on imaging point dipoles indicate that the resolution is generally close to λ/4 however on resonance with whispering gallery modes it may be slightly higher. Second, experimentally, we used actin protein filaments for the resolution quantification in microspherical nanoscopy. The critical feature of our approach is based on using arrayed cladding layer with strong localized surface plasmon resonances. This layer is used for enhancing plasmonic near-field illumination of our objects. In combination with the magnification of virtual image, this technique resulted in the lateral resolution of actin protein filaments on the order of λ/7.

Contour advection with surgery: A technique for investigating finescale structure in tracer transport

NASA Technical Reports Server (NTRS)

Waugh, Darryn W.; Plumb, R. Alan

1994-01-01

We present a trajectory technique, contour advection with surgery (CAS), for tracing the evolution of material contours in a specified (including observed) evolving flow. CAS uses the algorithms developed by Dritschel for contour dynamics/surgery to trace the evolution of specified contours. The contours are represented by a series of particles, which are advected by a specified, gridded, wind distribution. The resolution of the contours is preserved by continually adjusting the number of particles, and finescale features are produced that are not present in the input data (and cannot easily be generated using standard trajectory techniques). The reliability, and dependence on the spatial and temporal resolution of the wind field, of the CAS procedure is examined by comparisons with high-resolution numerical data (from contour dynamics calculations and from a general circulation model), and with routine stratospheric analyses. These comparisons show that the large-scale motions dominate the deformation field and that CAS can accurately reproduce small scales from low-resolution wind fields. The CAS technique therefore enables examination of atmospheric tracer transport at previously unattainable resolution.

The ASTER emergency scheduling system: A new project linking near-real-time satellite monitoring of disasters to the acquisition of high-resolution remote sensing data

NASA Astrophysics Data System (ADS)

Ramsey, M.; Dehn, J.; Wessels, R.; Byrnes, J.; Duda, K.; Maldonado, L.; Dwyer, J.

2004-12-01

Numerous government agencies and university partnerships are currently utilizing orbital instruments with high-temporal/low-spatial resolution (e.g. MODIS, AVHRR) to monitor hazards. These hazards are varied and include both natural (volcanic eruptions, severe weather, wildfires, earthquake damage) and anthropogenic (environmental damage, urban terrorism). Although monitoring a hazardous situation is critical, a key strategy of NASA's Earth science program is to develop a scientific understanding of the Earth system and its responses to changes, as well as to improve prediction of hazard onset. In order to develop a quantitative scientific basis from which to model transient geological and climatological hazards, much higher spatial/spectral resolution datasets are required. Such datasets are sparse, currently available from certain government (e.g. ASTER, Hyperion) and commercial (e.g. IKONOS, QuickBird) instruments. However, only ASTER has the capability to acquire high spatial resolution data from the visible to thermal infrared (TIR) wavelength region in conjunction with digital elevation models (DEM) generation. These capabilities are particularly useful for numerous aspects of volcanic remote sensing. For example, multispectral TIR data are critical for monitoring low temperature anomalies and mapping both chemical and textural variations on volcanic surfaces. Because ASTER data are scheduled in advance and the raw data are sent to Japan for calibration processing, rapid acquisition of hazards becomes problematic. However, a "rapid response" mode does exist for ASTER data scheduling and processing, but its availability is limited and requires significant human interaction. A newly-funded NASA ASTER science team project seeks to link this ASTER rapid response pathway to larger-scale monitoring alerts, which are already in-place and in-use by other organizations. By refining the initial event detection criteria and improving interfaces between these organizations and the ASTER project, we expect to minimize lag time and use existing monitoring tools as triggers for the emergency response of ASTER. The first phase of this project will be integrated into the Alaska Volcano Observatory's current near-real-time volcanic monitoring system, which relies on high temporal/low spatial resolution orbital data. This synergy will allow small-scale activity to be targeted for science and response, and a calibration baseline between each sensor to be established. If successful, this will be the first time that high spatial resolution, multispectral satellite data will be routinely scheduled, acquired, and analyzed in a "rapid response" mode within an existing hazard monitoring framework. Initial testing of this system is now underway using data from previous eruptions in the north Pacific region, and modifications to the rapid data flow procedure within the ASTER science and support structure has begun.

Rip current evidence by hydrodynamic simulations, bathymetric surveys and UAV observation

NASA Astrophysics Data System (ADS)

Benassai, Guido; Aucelli, Pietro; Budillon, Giorgio; De Stefano, Massimo; Di Luccio, Diana; Di Paola, Gianluigi; Montella, Raffaele; Mucerino, Luigi; Sica, Mario; Pennetta, Micla

2017-09-01

The prediction of the formation, spacing and location of rip currents is a scientific challenge that can be achieved by means of different complementary methods. In this paper the analysis of numerical and experimental data, including RPAS (remotely piloted aircraft systems) observations, allowed us to detect the presence of rip currents and rip channels at the mouth of Sele River, in the Gulf of Salerno, southern Italy. The dataset used to analyze these phenomena consisted of two different bathymetric surveys, a detailed sediment analysis and a set of high-resolution wave numerical simulations, completed with Google EarthTM images and RPAS observations. The grain size trend analysis and the numerical simulations allowed us to identify the rip current occurrence, forced by topographically constrained channels incised on the seabed, which were compared with observations.

Hybrid Multiscale Finite Volume method for multiresolution simulations of flow and reactive transport in porous media

NASA Astrophysics Data System (ADS)

Barajas-Solano, D. A.; Tartakovsky, A. M.

2017-12-01

We present a multiresolution method for the numerical simulation of flow and reactive transport in porous, heterogeneous media, based on the hybrid Multiscale Finite Volume (h-MsFV) algorithm. The h-MsFV algorithm allows us to couple high-resolution (fine scale) flow and transport models with lower resolution (coarse) models to locally refine both spatial resolution and transport models. The fine scale problem is decomposed into various "local'' problems solved independently in parallel and coordinated via a "global'' problem. This global problem is then coupled with the coarse model to strictly ensure domain-wide coarse-scale mass conservation. The proposed method provides an alternative to adaptive mesh refinement (AMR), due to its capacity to rapidly refine spatial resolution beyond what's possible with state-of-the-art AMR techniques, and the capability to locally swap transport models. We illustrate our method by applying it to groundwater flow and reactive transport of multiple species.

Insight into resolution enhancement in generalized two-dimensional correlation spectroscopy.

PubMed

Ma, Lu; Sikirzhytski, Vitali; Hong, Zhenmin; Lednev, Igor K; Asher, Sanford A

2013-03-01

Generalized two-dimensional correlation spectroscopy (2D-COS) can be used to enhance spectral resolution in order to help differentiate highly overlapped spectral bands. Despite the numerous extensive 2D-COS investigations, the origin of the 2D spectral resolution enhancement mechanism(s) is not completely understood. In the work here, we studied the 2D-COS of simulated spectra in order to develop new insights into the dependence of 2D-COS spectral features on the overlapping band separations, their intensities and bandwidths, and their band intensity change rates. We found that the features in the 2D-COS maps that are derived from overlapping bands were determined by the spectral normalized half-intensities and the total intensity changes of the correlated bands. We identified the conditions required to resolve overlapping bands. In particular, 2D-COS peak resolution requires that the normalized half-intensities of a correlating band have amplitudes between the maxima and minima of the normalized half-intensities of the overlapping bands.

Insight into Resolution Enhancement in Generalized Two-Dimensional Correlation Spectroscopy

PubMed Central

Ma, Lu; Sikirzhytski, Vitali; Hong, Zhenmin; Lednev, Igor K.; Asher, Sanford A.

2014-01-01

Generalized two-dimensional correlation spectroscopy (2D COS) can be used to enhance spectral resolution in order to help differentiate highly overlapped spectral bands. Despite the numerous extensive 2D COS investigations, the origin of the 2D spectral resolution enhancement mechanism(s) are not completely understood. In the work here we studied the 2D COS of simulated spectra in order to develop new insights into the dependence of the 2D COS spectral features on the overlapping band separations, their intensities and bandwidths, and their band intensity change rates. We find that the features in the 2D COS maps that derive from overlapping bands are determined by the spectral normalized half-intensities and the total intensity changes of the correlated bands. We identify the conditions required to resolve overlapping bands. In particular, 2D COS peak resolution requires that the normalized half-intensities of a correlating band have amplitudes between the maxima and minima of the normalized half-intensities of the overlapping bands. PMID:23452492

High-Resolution Graphene Films for Electrochemical Sensing via Inkjet Maskless Lithography.

PubMed

Hondred, John A; Stromberg, Loreen R; Mosher, Curtis L; Claussen, Jonathan C

2017-10-24

Solution-phase printing of nanomaterial-based graphene inks are rapidly gaining interest for fabrication of flexible electronics. However, scalable manufacturing techniques for high-resolution printed graphene circuits are still lacking. Here, we report a patterning technique [i.e., inkjet maskless lithography (IML)] to form high-resolution, flexible, graphene films (line widths down to 20 μm) that significantly exceed the current inkjet printing resolution of graphene (line widths ∼60 μm). IML uses an inkjet printed polymer lacquer as a sacrificial pattern, viscous spin-coated graphene, and a subsequent graphene lift-off to pattern films without the need for prefabricated stencils, templates, or cleanroom technology (e.g., photolithography). Laser annealing is employed to increase conductivity on thermally sensitive, flexible substrates [polyethylene terephthalate (PET)]. Laser annealing and subsequent platinum nanoparticle deposition substantially increases the electroactive nature of graphene as illustrated by electrochemical hydrogen peroxide (H 2 O 2 ) sensing [rapid response (5 s), broad linear sensing range (0.1-550 μm), high sensitivity (0.21 μM/μA), and low detection limit (0.21 μM)]. Moreover, high-resolution, complex graphene circuits [i.e., interdigitated electrodes (IDE) with varying finger width and spacing] were created with IML and characterized via potassium chloride (KCl) electrochemical impedance spectroscopy (EIS). Results indicated that sensitivity directly correlates to electrode feature size as the IDE with the smallest finger width and spacing (50 and 50 μm) displayed the largest response to changes in KCl concentration (∼21 kΩ). These results indicate that the developed IML patterning technique is well-suited for rapid, solution-phase graphene film prototyping on flexible substrates for numerous applications including electrochemical sensing.

Sea Ice Pressure Ridge Height Distributions for the Arctic Ocean in Winter, Just Prior to Melt

NASA Astrophysics Data System (ADS)

Duncan, K.; Farrell, S. L.; Richter-Menge, J.; Hutchings, J.; Dominguez, R.; Connor, L. N.

2016-12-01

Pressure ridges are one of the most dominant morphological features of the Arctic sea ice pack. An impediment to navigation, pressure ridges are also of climatological interest since they impact the mass, energy and momentum transfer budgets for the Arctic Ocean. Understanding the regional and seasonal distributions of ridge sail heights, and their variability, is important for quantifying total sea ice mass, and for improved treatment of sea ice dynamics in high-resolution numerical models. Observations of sail heights from airborne and ship-based platforms have been documented in previous studies, however studies with both high spatial and temporal resolution, across multiple regions of the Arctic, are only recently possible with the advent of dedicated airborne surveys of the Arctic Ocean. In this study we present results from the high-resolution Digital Mapping System (DMS), flown as part of NASA's Operation IceBridge missions. We use DMS imagery to calculate ridge sail heights, derived from the shadows they cast combined with the solar elevation angle and the known pixel size of each image. Our analyses describe sea ice conditions at the end of winter, during the months of March and April, over a period spanning seven years, from 2010 to 2016. The high spatial resolution (0.1m) and temporal extent (seven years) of the DMS data set provides, for the first time, the full sail-height distributions of both first-year and multi-year sea ice. We present the inter-annual variability in sail height distributions for both the Central Arctic and the Beaufort and Chukchi Seas. We validate our results via comparison with spatially coincident high-resolution SAR imagery and airborne laser altimeter elevations.

High resolution simulations of a variable HH jet

NASA Astrophysics Data System (ADS)

Raga, A. C.; de Colle, F.; Kajdič, P.; Esquivel, A.; Cantó, J.

2007-04-01

Context: In many papers, the flows in Herbig-Haro (HH) jets have been modeled as collimated outflows with a time-dependent ejection. In particular, a supersonic variability of the ejection velocity leads to the production of "internal working surfaces" which (for appropriate forms of the time-variability) can produce emitting knots that resemble the chains of knots observed along HH jets. Aims: In this paper, we present axisymmetric simulations of an "internal working surface" in a radiative jet (produced by an ejection velocity variability). We concentrate on a given parameter set (i.e., on a jet with a constante ejection density, and a sinusoidal velocity variability with a 20 yr period and a 40 km s-1 half-amplitude), and carry out a study of the behaviour of the solution for increasing numerical resolutions. Methods: In our simulations, we solve the gasdynamic equations together with a 17-species atomic/ionic network, and we are therefore able to compute emission coefficients for different emission lines. Results: We compute 3 adaptive grid simulations, with 20, 163 and 1310 grid points (at the highest grid resolution) across the initial jet radius. From these simulations we see that successively more complex structures are obtained for increasing numerical resolutions. Such an effect is seen in the stratifications of the flow variables as well as in the predicted emission line intensity maps. Conclusions: .We find that while the detailed structure of an internal working surface depends on resolution, the predicted emission line luminosities (integrated over the volume of the working surface) are surprisingly stable. This is definitely good news for the future computation of predictions from radiative jet models for carrying out comparisons with observations of HH objects.

Using MODIS Terra 250 m Imagery to Map Concentrations of Total Suspended Matter in Coastal Waters

NASA Technical Reports Server (NTRS)

Miller, Richard L.; McKee, Brent A.

2004-01-01

High concentrations of suspended particulate matter in coastal waters directly effect or govern numerous water column and benthic processes. The concentration of suspended sediments derived from bottom sediment resuspension or discharge of sediment-laden rivers is highly variable over a wide range of time and space scales. Although there has been considerable effort to use remotely sensed images to provide synoptic maps of suspended particulate matter, there are limited routine applications of this technology due in-part to the low spatial resolution, long revisit period, or cost of most remotely sensed data. In contrast, near daily coverage of medium-resolution data is available from the MODIS Terra instrument without charge from several data distribution gateways. Equally important, several display and processing programs are available that operate on low cost computers.

Probing the Spatio-Temporal Characteristics of Temporal Aliasing Errors and their Impact on Satellite Gravity Retrievals

NASA Astrophysics Data System (ADS)

Wiese, D. N.; McCullough, C. M.

2017-12-01

Studies have shown that both single pair low-low satellite-to-satellite tracking (LL-SST) and dual-pair LL-SST hypothetical future satellite gravimetry missions utilizing improved onboard measurement systems relative to the Gravity Recovery and Climate Experiment (GRACE) will be limited by temporal aliasing errors; that is, the error introduced through deficiencies in models of high frequency mass variations required for the data processing. Here, we probe the spatio-temporal characteristics of temporal aliasing errors to understand their impact on satellite gravity retrievals using high fidelity numerical simulations. We find that while aliasing errors are dominant at long wavelengths and multi-day timescales, improving knowledge of high frequency mass variations at these resolutions translates into only modest improvements (i.e. spatial resolution/accuracy) in the ability to measure temporal gravity variations at monthly timescales. This result highlights the reliance on accurate models of high frequency mass variations for gravity processing, and the difficult nature of reducing temporal aliasing errors and their impact on satellite gravity retrievals.

Identifying high production, low production and degraded rangelands in Senegal with normalized difference vegetation index data

USGS Publications Warehouse

Tappan, G. Gray; Wood, Lynette; Moore, Donald G.

1993-01-01

Seasonal herbaceous vegetation production on Senegal's native rangelands exhibits high spatial and temporal variability. This variability can be monitored using normalized difference vegetation index (NDVI) data computed from 1-km resolution Advanced Very High Resolution Radiometer (AVHRR) image data. Although annual fluctuations in rainfall account for some of the variability, numerous long-term production patterns are evident in the AVHRR time-series data. Different n productivity reflect variations in the region's climate, topography, soils, and land use. Areas of overgrazing and intensive cultivation have caused long-term soil and vegetation degradation. Rangelands of high and low productivity, and degraded rangelands were identified using NDVI. Time-series image data from 1987 though 1992 were used to map relative rangeland productivity. The results were compared to detailed resource maps on soils, vegetation and land use. Much of the variation in rangeland productivity correlated well to the known distribution of resources. The study developed an approach that identified a number of areas of degraded soils and low vegetation production.

Handwritten numeral databases of Indian scripts and multistage recognition of mixed numerals.

PubMed

Bhattacharya, Ujjwal; Chaudhuri, B B

2009-03-01

This article primarily concerns the problem of isolated handwritten numeral recognition of major Indian scripts. The principal contributions presented here are (a) pioneering development of two databases for handwritten numerals of two most popular Indian scripts, (b) a multistage cascaded recognition scheme using wavelet based multiresolution representations and multilayer perceptron classifiers and (c) application of (b) for the recognition of mixed handwritten numerals of three Indian scripts Devanagari, Bangla and English. The present databases include respectively 22,556 and 23,392 handwritten isolated numeral samples of Devanagari and Bangla collected from real-life situations and these can be made available free of cost to researchers of other academic Institutions. In the proposed scheme, a numeral is subjected to three multilayer perceptron classifiers corresponding to three coarse-to-fine resolution levels in a cascaded manner. If rejection occurred even at the highest resolution, another multilayer perceptron is used as the final attempt to recognize the input numeral by combining the outputs of three classifiers of the previous stages. This scheme has been extended to the situation when the script of a document is not known a priori or the numerals written on a document belong to different scripts. Handwritten numerals in mixed scripts are frequently found in Indian postal mails and table-form documents.

Utilization of Short-Simulations for Tuning High-Resolution Climate Model

NASA Astrophysics Data System (ADS)

Lin, W.; Xie, S.; Ma, P. L.; Rasch, P. J.; Qian, Y.; Wan, H.; Ma, H. Y.; Klein, S. A.

2016-12-01

Many physical parameterizations in atmospheric models are sensitive to resolution. Tuning the models that involve a multitude of parameters at high resolution is computationally expensive, particularly when relying primarily on multi-year simulations. This work describes a complementary set of strategies for tuning high-resolution atmospheric models, using ensembles of short simulations to reduce the computational cost and elapsed time. Specifically, we utilize the hindcast approach developed through the DOE Cloud Associated Parameterization Testbed (CAPT) project for high-resolution model tuning, which is guided by a combination of short (< 10 days ) and longer ( 1 year) Perturbed Parameters Ensemble (PPE) simulations at low resolution to identify model feature sensitivity to parameter changes. The CAPT tests have been found to be effective in numerous previous studies in identifying model biases due to parameterized fast physics, and we demonstrate that it is also useful for tuning. After the most egregious errors are addressed through an initial "rough" tuning phase, longer simulations are performed to "hone in" on model features that evolve over longer timescales. We explore these strategies to tune the DOE ACME (Accelerated Climate Modeling for Energy) model. For the ACME model at 0.25° resolution, it is confirmed that, given the same parameters, major biases in global mean statistics and many spatial features are consistent between Atmospheric Model Intercomparison Project (AMIP)-type simulations and CAPT-type hindcasts, with just a small number of short-term simulations for the latter over the corresponding season. The use of CAPT hindcasts to find parameter choice for the reduction of large model biases dramatically improves the turnaround time for the tuning at high resolution. Improvement seen in CAPT hindcasts generally translates to improved AMIP-type simulations. An iterative CAPT-AMIP tuning approach is therefore adopted during each major tuning cycle, with the former to survey the likely responses and narrow the parameter space, and the latter to verify the results in climate context along with assessment in greater detail once an educated set of parameter choice is selected. Limitations on using short-term simulations for tuning climate model are also discussed.

Application of Numerical Weather Models to Mitigating Atmospheric Artifacts in InSAR

NASA Astrophysics Data System (ADS)

Foster, J. H.; Kealy, J.; Businger, S.; Cherubini, T.; Brooks, B. A.; Albers, S. C.; Lu, Z.; Poland, M. P.; Chen, S.; Mass, C.

2011-12-01

A high-resolution weather "hindcasting" system to model the atmosphere at the time of SAR scene acquisitions has been established to investigate and mitigate the impact of atmospheric water vapor on InSAR deformation maps. Variations in the distributions of water vapor in the atmosphere between SAR acquisitions lead to artifacts in interferograms that can mask real ground motion signals. A database of regional numerical weather prediction model outputs generated by the University of Washington and U.C. Davis for times matching SAR acquisitions was used as "background" for higher resolution analyses of the atmosphere for Mount St Helens volcano in Washington, and Los Angeles in southern California. Using this background, we use LAPS to incrementally incorporate all other available meteorological data sets, including GPS, to explore the impact of additional observations on model accuracy. Our results suggest that, even with significant quantities of contemporaneously measured data, high-resolution atmospheric analyses are unable to model the timing and location of water vapor perturbations accurately enough to produce robust and reliable phase screens that can be directly subtracted from interferograms. Despite this, the analyses are able to reproduce the statistical character of the atmosphere with some confidence, suggesting that, in the absence of unusually dense in-situ measurements (such as is the case with GPS data for Los Angeles), weather analysis can play a valuable role in constraining the power-spectrum expected in an interferogram due to the troposphere. This could be used to provide objective weights to scenes during traditional stacking or to tune the filter parameters in time-series analyses.

The Mars Climate Database (MCD version 5.2)

NASA Astrophysics Data System (ADS)

Millour, E.; Forget, F.; Spiga, A.; Navarro, T.; Madeleine, J.-B.; Montabone, L.; Pottier, A.; Lefevre, F.; Montmessin, F.; Chaufray, J.-Y.; Lopez-Valverde, M. A.; Gonzalez-Galindo, F.; Lewis, S. R.; Read, P. L.; Huot, J.-P.; Desjean, M.-C.; MCD/GCM development Team

2015-10-01

The Mars Climate Database (MCD) is a database of meteorological fields derived from General Circulation Model (GCM) numerical simulations of the Martian atmosphere and validated using available observational data. The MCD includes complementary post-processing schemes such as high spatial resolution interpolation of environmental data and means of reconstructing the variability thereof. We have just completed (March 2015) the generation of a new version of the MCD, MCD version 5.2

A Review of Element-Based Galerkin Methods for Numerical Weather Prediction

DTIC Science & Technology

2015-04-01

with body forces to model the effects of gravity and the Earth’s rotation (i.e. Coriolis force). Although the gravitational force varies with both...more phenomena (e.g. resolving non-hydrostatic effects , incorporating more complex moisture parameterizations), their appetite for High Performance...operation effectively ). For instance, the ST-based model NOGAPS, used by the U. S. Navy, could not scale beyond 150 processes at typical resolutions [119

Use of airborne near-infrared LiDAR for determining channel cross-section characteristics and monitoring aquatic habitat in Pacific Northwest rivers: A preliminary analysis [Chapter 6

Treesearch

Russell N. Faux; John M. Buffington; M. German Whitley; Steve H. Lanigan; Brett B. Roper

2009-01-01

Aquatic habitat monitoring is being conducted by numerous organizations in many parts of the Pacific Northwest to document physical and biological conditions of stream reaches as part of legal- and policy-mandated environmental assessments. Remote sensing using discrete-return, near-infrared, airborne LiDAR (Light Detection and Ranging) and high-resolution digital...

Observations and High-Resolution Numerical Simulations of a Non-Developing Tropical Disturbance in the Western North Pacific

DTIC Science & Technology

2013-09-01

potential energy CFSR Climate Forecast System Reanalysis COAMPS Coupled Ocean / Atmosphere Mesoscale Prediction System DA data assimilation DART Data...developing (TCS025) tropical disturbance using the adjoint and tangent linear models for the Coupled Ocean – Atmosphere Mesoscale Prediction System (COAMPS...for Medium-range Weather Forecasts ELDORA ELectra DOppler RAdar EOL Earth Observing Laboratory GPS global positioning system GTS Global

Towards High Resolution Numerical Algorithms for Wave Dominated Physical Phenomena

DTIC Science & Technology

2009-01-30

results are scaled as floating point operations per second, obtained by counting the number of floating point additions and multiplications in the...black horizontal line. Perhaps the most striking feature at first is the fact that the memory bandwidth measured for flux lifting transcends this...theoretical peak performance values. For a suitable CPU-limited workload, this means that a single workstation equipped with multiple GPUs can do work that

Numerical Study of Boundary Layer Interaction with Shocks: Method Improvement and Test Computation

NASA Technical Reports Server (NTRS)

Adams, N. A.

1995-01-01

The objective is the development of a high-order and high-resolution method for the direct numerical simulation of shock turbulent-boundary-layer interaction. Details concerning the spatial discretization of the convective terms can be found in Adams and Shariff (1995). The computer code based on this method as introduced in Adams (1994) was formulated in Cartesian coordinates and thus has been limited to simple rectangular domains. For more general two-dimensional geometries, as a compression corner, an extension to generalized coordinates is necessary. To keep the requirements or limitations for grid generation low, the extended formulation should allow for non-orthogonal grids. Still, for simplicity and cost efficiency, periodicity can be assumed in one cross-flow direction. For easy vectorization, the compact-ENO coupling algorithm as used in Adams (1994) treated whole planes normal to the derivative direction with the ENO scheme whenever at least one point of this plane satisfied the detection criterion. This is apparently too restrictive for more general geometries and more complex shock patterns. Here we introduce a localized compact-ENO coupling algorithm, which is efficient as long as the overall number of grid points treated by the ENO scheme is small compared to the total number of grid points. Validation and test computations with the final code are performed to assess the efficiency and suitability of the computer code for the problems of interest. We define a set of parameters where a direct numerical simulation of a turbulent boundary layer along a compression corner with reasonably fine resolution is affordable.

A Simplified Model for Multiphase Leakage through Faults with Applications for CO2 Storage

NASA Astrophysics Data System (ADS)

Watson, F. E.; Doster, F.

2017-12-01

In the context of geological CO2 storage, faults in the subsurface could affect storage security by acting as high permeability pathways which allow CO2 to flow upwards and away from the storage formation. To assess the likelihood of leakage through faults and the impacts faults might have on storage security numerical models are required. However, faults are complex geological features, usually consisting of a fault core surrounded by a highly fractured damage zone. A direct representation of these in a numerical model would require very fine grid resolution and would be computationally expensive. Here, we present the development of a reduced complexity model for fault flow using the vertically integrated formulation. This model captures the main features of the flow but does not require us to resolve the vertical dimension, nor the fault in the horizontal dimension, explicitly. It is thus less computationally expensive than full resolution models. Consequently, we can quickly model many realisations for parameter uncertainty studies of CO2 injection into faulted reservoirs. We develop the model based on explicitly simulating local 3D representations of faults for characteristic scenarios using the Matlab Reservoir Simulation Toolbox (MRST). We have assessed the impact of variables such as fault geometry, porosity and permeability on multiphase leakage rates.

Implicit Total Variation Diminishing (TVD) schemes for steady-state calculations

NASA Technical Reports Server (NTRS)

Yee, H. C.; Warming, R. F.; Harten, A.

1983-01-01

The application of a new implicit unconditionally stable high resolution total variation diminishing (TVD) scheme to steady state calculations. It is a member of a one parameter family of explicit and implicit second order accurate schemes developed by Harten for the computation of weak solutions of hyperbolic conservation laws. This scheme is guaranteed not to generate spurious oscillations for a nonlinear scalar equation and a constant coefficient system. Numerical experiments show that this scheme not only has a rapid convergence rate, but also generates a highly resolved approximation to the steady state solution. A detailed implementation of the implicit scheme for the one and two dimensional compressible inviscid equations of gas dynamics is presented. Some numerical computations of one and two dimensional fluid flows containing shocks demonstrate the efficiency and accuracy of this new scheme.

Gaussian representation of high-intensity focused ultrasound beams.

PubMed

Soneson, Joshua E; Myers, Matthew R

2007-11-01

A method for fast numerical simulation of high-intensity focused ultrasound beams is derived. The method is based on the frequency-domain representation of the Khokhlov-Zabolotskaya-Kuznetsov (KZK) equation, and assumes for each harmonic a Gaussian transverse pressure distribution at all distances from the transducer face. The beamwidths of the harmonics are constrained to vary inversely with the square root of the harmonic number, and as such this method may be viewed as an extension of a quasilinear approximation. The technique is capable of determining pressure or intensity fields of moderately nonlinear high-intensity focused ultrasound beams in water or biological tissue, usually requiring less than a minute of computer time on a modern workstation. Moreover, this method is particularly well suited to high-gain simulations since, unlike traditional finite-difference methods, it is not subject to resolution limitations in the transverse direction. Results are shown to be in reasonable agreement with numerical solutions of the full KZK equation in both tissue and water for moderately nonlinear beams.

Assessing resolution in live cell structured illumination microscopy

NASA Astrophysics Data System (ADS)

Pospíšil, Jakub; Fliegel, Karel; Klíma, Miloš

2017-12-01

Structured Illumination Microscopy (SIM) is a powerful super-resolution technique, which is able to enhance the resolution of optical microscope beyond the Abbe diffraction limit. In the last decade, numerous SIM methods that achieve the resolution of 100 nm in the lateral dimension have been developed. The SIM setups with new high-speed cameras and illumination pattern generators allow rapid acquisition of the live specimen. Therefore, SIM is widely used for investigation of the live structures in molecular and live cell biology. Quantitative evaluation of resolution enhancement in a real sample is essential to describe the efficiency of super-resolution microscopy technique. However, measuring the resolution of a live cell sample is a challenging task. Based on our experimental findings, the widely used Fourier ring correlation (FRC) method does not seem to be well suited for measuring the resolution of SIM live cell video sequences. Therefore, the resolution assessing methods based on Fourier spectrum analysis are often used. We introduce a measure based on circular average power spectral density (PSDca) estimated from a single SIM image (one video frame). PSDca describes the distribution of the power of a signal with respect to its spatial frequency. Spatial resolution corresponds to the cut-off frequency in Fourier space. In order to estimate the cut-off frequency from a noisy signal, we use a spectral subtraction method for noise suppression. In the future, this resolution assessment approach might prove useful also for single-molecule localization microscopy (SMLM) live cell imaging.

Assessing the Global Climate Response to Freshwater Forcing from the Antarctic Ice Sheet Under Future Climate Scenarios

NASA Astrophysics Data System (ADS)

Rogstad, S.; Condron, A.; DeConto, R.; Pollard, D.

2017-12-01

Observational evidence indicates that the West Antarctic Ice Sheet (WAIS) is losing mass at an accelerating rate. Impacts to global climate resulting from changing ocean circulation patterns due to increased freshwater runoff from Antarctica in the future could have significant implications for global heat transport, but to-date this topic has not been investigated using complex numerical models with realistic freshwater forcing. Here, we present results from a high resolution fully coupled ocean-atmosphere model (CESM 1.2) forced with runoff from Antarctica prescribed from a high resolution regional ice sheet-ice shelf model. Results from the regional simulations indicate a potential freshwater contribution from Antarctica of up to 1 m equivalent sea level rise by the end of the century under RCP 8.5 indicating that a substantial input of freshwater into the Southern Ocean is possible. Our high resolution global simulations were performed under IPCC future climate scenarios RCP 4.5 and 8.5. We will present results showing the impact of WAIS collapse on global ocean circulation, sea ice, air temperature, and salinity in order to assess the potential for abrupt climate change triggered by WAIS collapse.

High-resolution gravity field modeling using GRAIL mission data

NASA Astrophysics Data System (ADS)

Lemoine, F. G.; Goossens, S. J.; Sabaka, T. J.; Nicholas, J. B.; Mazarico, E.; Rowlands, D. D.; Neumann, G. A.; Loomis, B.; Chinn, D. S.; Smith, D. E.; Zuber, M. T.

2015-12-01

The Gravity Recovery and Interior Laboratory (GRAIL) spacecraft were designed to map the structure of the Moon through high-precision global gravity mapping. The mission consisted of two spacecraft with Ka-band inter-satellite tracking complemented by tracking from Earth. The mission had two phases: a primary mapping mission from March 1 until May 29, 2012 at an average altitude of 50 km, and an extended mission from August 30 until December 14, 2012, with an average altitude of 23 km before November 18, and 20 and 11 km after. High-resolution gravity field models using both these data sets have been estimated, with the current resolution being degree and order 1080 in spherical harmonics. Here, we focus on aspects of the analysis of the GRAIL data: we investigate eclipse modeling, the influence of empirical accelerations on the results, and we discuss the inversion of large-scale systems. In addition to global models we also estimated local gravity adjustments in areas of particular interest such as Mare Orientale, the south pole area, and the farside. We investigate the use of Ka-band Range Rate (KBRR) data versus numerical derivatives of KBRR data, and show that the latter have the capability to locally improve correlations with topography.

Enviro-HIRLAM/ HARMONIE Studies in ECMWF HPC EnviroAerosols Project

NASA Astrophysics Data System (ADS)

Hansen Sass, Bent; Mahura, Alexander; Nuterman, Roman; Baklanov, Alexander; Palamarchuk, Julia; Ivanov, Serguei; Pagh Nielsen, Kristian; Penenko, Alexey; Edvardsson, Nellie; Stysiak, Aleksander Andrzej; Bostanbekov, Kairat; Amstrup, Bjarne; Yang, Xiaohua; Ruban, Igor; Bergen Jensen, Marina; Penenko, Vladimir; Nurseitov, Daniyar; Zakarin, Edige

2017-04-01

The EnviroAerosols on ECMWF HPC project (2015-2017) "Enviro-HIRLAM/ HARMONIE model research and development for online integrated meteorology-chemistry-aerosols feedbacks and interactions in weather and atmospheric composition forecasting" is aimed at analysis of importance of the meteorology-chemistry/aerosols interactions and to provide a way for development of efficient techniques for on-line coupling of numerical weather prediction and atmospheric chemical transport via process-oriented parameterizations and feedback algorithms, which will improve both the numerical weather prediction and atmospheric composition forecasts. Two main application areas of the on-line integrated modelling are considered: (i) improved numerical weather prediction with short-term feedbacks of aerosols and chemistry on formation and development of meteorological variables, and (ii) improved atmospheric composition forecasting with on-line integrated meteorological forecast and two-way feedbacks between aerosols/chemistry and meteorology. During 2015-2016 several research projects were realized. At first, the study on "On-line Meteorology-Chemistry/Aerosols Modelling and Integration for Risk Assessment: Case Studies" focused on assessment of scenarios with accidental and continuous emissions of sulphur dioxide for case studies for Atyrau (Kazakhstan) near the northern part of the Caspian Sea and metallurgical enterprises on the Kola Peninsula (Russia), with GIS integration of modelling results into the RANDOM (Risk Assessment of Nature Detriment due to Oil spill Migration) system. At second, the studies on "The sensitivity of precipitation simulations to the soot aerosol presence" & "The precipitation forecast sensitivity to data assimilation on a very high resolution domain" focused on sensitivity and changes in precipitation life-cycle under black carbon polluted conditions over Scandinavia. At third, studies on "Aerosol effects over China investigated with a high resolution convection permitting weather model" & "Meteorological and chemical urban scale modelling for Shanghai metropolitan area" with focus on aerosol effects and influence of urban areas in China at regional-subregional-urban scales. At fourth, study on "Direct variational data assimilation algorithm for atmospheric chemistry data with transport and transformation model" with focus on testing chemical data assimilation algorithm of in situ concentration measurements on real data scenario. At firth, study on "Aerosol influence on High Resolution NWP HARMONIE Operational Forecasts" with focus on impact of sea salt aerosols on numerical weather prediction during low precipitation events. And finally, study on "Impact of regional afforestation on climatic conditions in metropolitan areas: case study of Copenhagen" with focus on impact of forest and land-cover change on formation and development of temperature regimes in the Copenhagen metropolitan area of Denmark. Selected results and findings will be presented and discussed.

Application of multi-grid method on the simulation of incremental forging processes

NASA Astrophysics Data System (ADS)

Ramadan, Mohamad; Khaled, Mahmoud; Fourment, Lionel

2016-10-01

Numerical simulation becomes essential in manufacturing large part by incremental forging processes. It is a splendid tool allowing to show physical phenomena however behind the scenes, an expensive bill should be paid, that is the computational time. That is why many techniques are developed to decrease the computational time of numerical simulation. Multi-Grid method is a numerical procedure that permits to reduce computational time of numerical calculation by performing the resolution of the system of equations on several mesh of decreasing size which allows to smooth faster the low frequency of the solution as well as its high frequency. In this paper a Multi-Grid method is applied to cogging process in the software Forge 3. The study is carried out using increasing number of degrees of freedom. The results shows that calculation time is divide by two for a mesh of 39,000 nodes. The method is promising especially if coupled with Multi-Mesh method.

A Numerical Model for Trickle Bed Reactors

NASA Astrophysics Data System (ADS)

Propp, Richard M.; Colella, Phillip; Crutchfield, William Y.; Day, Marcus S.

2000-12-01

Trickle bed reactors are governed by equations of flow in porous media such as Darcy's law and the conservation of mass. Our numerical method for solving these equations is based on a total-velocity splitting, sequential formulation which leads to an implicit pressure equation and a semi-implicit mass conservation equation. We use high-resolution finite-difference methods to discretize these equations. Our solution scheme extends previous work in modeling porous media flows in two ways. First, we incorporate physical effects due to capillary pressure, a nonlinear inlet boundary condition, spatial porosity variations, and inertial effects on phase mobilities. In particular, capillary forces introduce a parabolic component into the recast evolution equation, and the inertial effects give rise to hyperbolic nonconvexity. Second, we introduce a modification of the slope-limiting algorithm to prevent our numerical method from producing spurious shocks. We present a numerical algorithm for accommodating these difficulties, show the algorithm is second-order accurate, and demonstrate its performance on a number of simplified problems relevant to trickle bed reactor modeling.

A quasi-spectral method for Cauchy problem of 2/D Laplace equation on an annulus

NASA Astrophysics Data System (ADS)

Saito, Katsuyoshi; Nakada, Manabu; Iijima, Kentaro; Onishi, Kazuei

2005-01-01

Real numbers are usually represented in the computer as a finite number of digits hexa-decimal floating point numbers. Accordingly the numerical analysis is often suffered from rounding errors. The rounding errors particularly deteriorate the precision of numerical solution in inverse and ill-posed problems. We attempt to use a multi-precision arithmetic for reducing the rounding error evil. The use of the multi-precision arithmetic system is by the courtesy of Dr Fujiwara of Kyoto University. In this paper we try to show effectiveness of the multi-precision arithmetic by taking two typical examples; the Cauchy problem of the Laplace equation in two dimensions and the shape identification problem by inverse scattering in three dimensions. It is concluded from a few numerical examples that the multi-precision arithmetic works well on the resolution of those numerical solutions, as it is combined with the high order finite difference method for the Cauchy problem and with the eigenfunction expansion method for the inverse scattering problem.

Progress in the Development of a Class of Efficient Low Dissipative High Order Shock-capturing Methods

NASA Technical Reports Server (NTRS)

Yee, H. C.; Sjogreen, B.; Sandham, N. D.; Hadjadj, A.; Kwak, Dochan (Technical Monitor)

2000-01-01

In a series of papers, Olsson (1994, 1995), Olsson & Oliger (1994), Strand (1994), Gerritsen Olsson (1996), Yee et al. (1999a,b, 2000) and Sandham & Yee (2000), the issue of nonlinear stability of the compressible Euler and Navier-Stokes Equations, including physical boundaries, and the corresponding development of the discrete analogue of nonlinear stable high order schemes, including boundary schemes, were developed, extended and evaluated for various fluid flows. High order here refers to spatial schemes that are essentially fourth-order or higher away from shock and shear regions. The objective of this paper is to give an overview of the progress of the low dissipative high order shock-capturing schemes proposed by Yee et al. (1999a,b, 2000). This class of schemes consists of simple non-dissipative high order compact or non-compact central spatial differencings and adaptive nonlinear numerical dissipation operators to minimize the use of numerical dissipation. The amount of numerical dissipation is further minimized by applying the scheme to the entropy splitting form of the inviscid flux derivatives, and by rewriting the viscous terms to minimize odd-even decoupling before the application of the central scheme (Sandham & Yee). The efficiency and accuracy of these scheme are compared with spectral, TVD and fifth- order WENO schemes. A new approach of Sjogreen & Yee (2000) utilizing non-orthogonal multi-resolution wavelet basis functions as sensors to dynamically determine the appropriate amount of numerical dissipation to be added to the non-dissipative high order spatial scheme at each grid point will be discussed. Numerical experiments of long time integration of smooth flows, shock-turbulence interactions, direct numerical simulations of a 3-D compressible turbulent plane channel flow, and various mixing layer problems indicate that these schemes are especially suitable for practical complex problems in nonlinear aeroacoustics, rotorcraft dynamics, direct numerical simulation or large eddy simulation of compressible turbulent flows at various speeds including high-speed shock-turbulence interactions, and general long time wave propagation problems. These schemes, including entropy splitting, have also been extended to freestream preserving schemes on curvilinear moving grids for a thermally perfect gas (Vinokur & Yee 2000).

The Changing Nature of QU Carinae: SN Ia Progenitor or a Hoax?

NASA Astrophysics Data System (ADS)

Kafka, Stella

2013-01-01

The race to the elusive Type Ia supernovae (SNe Ia) progenitors is at its zenith, with numerous clues from SNe Ia ejecta and a dearth of observational candidates. Still, the single degenerate channel is a viable route of mass accumulation onto a white dwarf to the Chandrasekhar limit. I present long-term high resolution spectroscopy of QU Carinae, one of the most promising single degenerate SNe Ia progenitors. I discuss its highly variable nature and compare it to current scenarios for mass accumulation onto high-mass white dwarfs, eventually leading to WD detonation and to a supernova explosion.