Rift Valley Fever Risk Map Model and Seroprevalence in Selected Wild Ungulates and Camels from Kenya

PubMed Central

Ruder, Mark G.; Linthicum, Kenneth J.; Anyamba, Assaf; Small, Jennifer L.; Tucker, Compton J.; Ateya, Leonard O.; Oriko, Abuu A.; Gacheru, Stephen; Wilson, William C.

2013-01-01

Since the first isolation of Rift Valley fever virus (RVFV) in the 1930s, there have been multiple epizootics and epidemics in animals and humans in sub-Saharan Africa. Prospective climate-based models have recently been developed that flag areas at risk of RVFV transmission in endemic regions based on key environmental indicators that precede Rift Valley fever (RVF) epizootics and epidemics. Although the timing and locations of human case data from the 2006–2007 RVF outbreak in Kenya have been compared to risk zones flagged by the model, seroprevalence of RVF antibodies in wildlife has not yet been analyzed in light of temporal and spatial predictions of RVF activity. Primarily wild ungulate serum samples from periods before, during, and after the 2006–2007 RVF epizootic were analyzed for the presence of RVFV IgM and/or IgG antibody. Results show an increase in RVF seropositivity from samples collected in 2007 (31.8%), compared to antibody prevalence observed from 2000–2006 (3.3%). After the epizootic, average RVF seropositivity diminished to 5% in samples collected from 2008–2009. Overlaying maps of modeled RVF risk assessments with sampling locations indicated positive RVF serology in several species of wild ungulate in or near areas flagged as being at risk for RVF. Our results establish the need to continue and expand sero-surveillance of wildlife species Kenya and elsewhere in the Horn of Africa to further calibrate and improve the RVF risk model, and better understand the dynamics of RVFV transmission. PMID:23840512

Rift Valley Fever Risk Map Model and Seroprevalence in Selected Wild Ungulates and Camels from Kenya

NASA Technical Reports Server (NTRS)

Britch, Seth C.; Binepal, Yatinder S.; Ruder, Mark G.; Kariithi, Henry M.; Linthicum, Kenneth J.; Anyamba, Assaf; Small, Jennifer L.; Tucker, Compton J.; Ateya, Leonard O.; Oriko, Abuu A.;

Evidence of Bovine viral diarrhea virus Infection in Three Species of Sympatric Wild Ungulates in Nevada: Life History Strategies May Maintain Endemic Infections in Wild Populations

PubMed Central

Wolff, Peregrine L.; Schroeder, Cody; McAdoo, Caleb; Cox, Mike; Nelson, Danielle D.; Evermann, James F.; Ridpath, Julia F.

2016-01-01

Evidence for bovine viral diarrhea virus (BVDV) infection was detected in 2009–2010 while investigating a pneumonia die-off in Rocky Mountain bighorn sheep (Ovis canadensis, canadensis), and sympatric mountain goats (Oreamnos americanum) in adjacent mountain ranges in Elko County, Nevada. Seroprevalence to BVDV-1 was 81% (N = 32) in the bighorns and 100% (N = 3) in the mountain goats. Serosurveillance from 2011 to 2015 of surviving bighorns and mountain goats as well as sympatric mule deer (Odocoileus hemionus), indicated a prevalence of 72% (N = 45), 45% (N = 51), and 51% (N = 342) respectively. All species had antibody titers to BVDV1 and BVDV2. BVDV1 was isolated in cell culture from three bighorn sheep and a mountain goat kid. BVDV2 was isolated from two mule deer. Six deer (N = 96) sampled in 2013 were positive for BVDV by antigen-capture ELISA on a single ear notch. Wild ungulates and cattle concurrently graze public and private lands in these two mountain ranges, thus providing potential for interspecies viral transmission. Like cattle, mule deer, mountain goats, and bighorn sheep can be infected with BVDV and can develop clinical disease including immunosuppression. Winter migration patterns that increase densities and species interaction during the first and second trimester of gestation may contribute to the long term maintenance of the virus in these wild ungulates. More studies are needed to determine the population level impacts of BVDV infection on these three species. PMID:27014215

Cryptic herbivores mediate the strength and form of ungulate impacts on a long-lived savanna tree.

PubMed

Maclean, Janet E; Goheen, Jacob R; Doak, Daniel F; Palmer, Todd M; Young, Truman P

2011-08-01

Plant populations are regulated by a diverse array of herbivores that impose demographic filters throughout their life cycle. Few studies, however, simultaneously quantify the impacts of multiple herbivore guilds on the lifetime performance or population growth rate of plants. In African savannas, large ungulates (such as elephants) are widely regarded as important drivers of woody plant population dynamics, while the potential impacts of smaller, more cryptic herbivores (such as rodents) have largely been ignored. We combined a large-scale ungulate exclusion experiment with a five-year manipulation of rodent densities to quantify the impacts of three herbivore guilds (wild ungulates, domestic cattle, and rodents) on all life stages of a widespread savanna tree. We utilized demographic modeling to reveal the overall role of each guild in regulating tree population dynamics, and to elucidate the importance of different demographic hurdles in driving population growth under contrasting consumer communities. We found that wild ungulates dramatically reduced population growth, shifting the population trajectory from increase to decline, but that the mechanisms driving these effects were strongly mediated by rodents. The impact of wild ungulates on population growth was predominantly driven by their negative effect on tree reproduction when rodents were excluded, and on adult tree survival when rodents were present. By limiting seedling survival, rodents also reduced population growth; however, this effect was strongly dampened where wild ungulates were present. We suggest that these complex interactions between disparate consumer guilds can have important consequences for the population demography of long-lived species, and that the effects of a single consumer group are often likely to vary dramatically depending on the larger community in which interactions are embedded.

Evaluation of techniques to protect aspen suckers from ungulate browsing in the Black Hills

Treesearch

Andrew M. Kota; Dale L. Bartos

2010-01-01

Excessive browsing by cattle (Bos taurus L.) and wild ungulates, particularly elk (Cervus elaphus L.), sometimes inhibits growth and maturity of quaking aspen (Populus tremuloides Michx.) suckers in Western North America. In areas where aspen stands are in poor condition or declining, protecting suckers from ungulates may be necessary. This study compared the utility...

Detection of Dichelobacter nodosus in wild ungulates (Capra ibex ibex and Ovis aries musimon) and domestic sheep suffering from foot rot using a two-step polymerase chain reaction.

PubMed

Belloy, Luc; Giacometti, Marco; Boujon, Patrick; Waldvogel, Andreas

2007-01-01

Severe keratinous hoof afflictions have been recorded in ibex (Capra ibex ibex) since 1995 and more recently in mouflon (Ovis aries musimon) in Switzerland. Based on clinical observations and comparison with diseases known to affect domestic ungulates, it was hypothesized these wild ungulates were affected by foot rot associated with infection with Dichelobacter nodosus. Dichelobacter nodosus has been shown to be the essential pathogen for initiation and establishment of foot rot, a highly contagious foot disease of sheep and goats. Because these bacteria could not be cultivated from affected ibex, we developed a nested polymerase chain reaction that allowed detection of D. nodosus without culture. Using this assay, we were able to diagnose D. nodosus infections of ibex, mouflon, and domestic sheep in natural outbreaks. From these results we conclude that D. nodosus plays an etiological role in foot rot not only in domestic but also in wild Caprinae.

Effects of ungulate herbivory on aspen, cottonwood, and willow development under forest fuels treatment regimes

Treesearch

Bryan A. Endress; Michael J. Wisdom; Martin Vavra; Catherine G. Parks; Brian L. Dick; Bridgett J. Naylor; Jennifer M. Boyd

2012-01-01

Herbivory by domestic and wild ungulates can dramatically affect vegetation structure, composition and dynamics in nearly every terrestrial ecosystem of the world. These effects are of particular concern in forests of western North America, where intensive herbivory by native and domestic ungulates has the potential to substantially reduce or eliminate deciduous,...

Antimicrobial Resistance in Indicator Escherichia coli Isolates from Free-Ranging Livestock and Sympatric Wild Ungulates in a Natural Environment (Northeastern Spain)

PubMed Central

Porrero, M. C.; Mentaberre, G.; Serrano, E.; Mateos, A.; Domínguez, L.; Lavín, S.

2013-01-01

Antimicrobial resistance was assessed in indicator Escherichia coli isolates from free-ranging livestock and sympatric wild boar (Sus scrofa) and Iberian ibex (Capra pyrenaica) in a National Game Reserve in northeastern Spain. The frequency of antimicrobial resistance was low (0% to 7.9%). However, resistance to an extended-spectrum cephalosporin and fluoroquinolones was detected. PMID:23892753

Expression of immunoregulatory genes and its relationship to lead exposure and lead-mediated oxidative stress in wild ungulates from an abandoned mining area.

PubMed

Rodríguez-Estival, Jaime; de la Lastra, José M Pérez; Ortiz-Santaliestra, Manuel E; Vidal, Dolors; Mateo, Rafael

2013-04-01

Lead (Pb) is a highly toxic metal that can induce oxidative stress and affect the immune system by modifying the expression of immunomodulator-related genes. The aim of the present study was to investigate the association between Pb exposure and the transcriptional profiles of some cytokines, as well as the relationship between Pb exposure and changes in oxidative stress biomarkers observed in the spleen of wild ungulates exposed to mining pollution. Red deer and wild boar from the mining area studied had higher spleen, liver, and bone Pb levels than controls, indicating a chronic exposure to Pb pollution. Such exposure caused a depletion of spleen glutathione levels in both species and disrupted the activity of antioxidant enzymes, suggesting the generation of oxidative stress conditions. Deer from the mining area also showed an induced T-helper (Th )-dependent immune response toward the Th 2 pathway, whereas boar from the mining area showed a cytokine profile suggesting an inclination of the immune response toward the Th 1 pathway. These results indicate that environmental exposure to Pb may alter immune responses in wild ungulates exposed to mining pollution. However, evidence of direct relationships between Pb-mediated oxidative stress and the changes detected in immune responses were not found. Further research is needed to evaluate the immunotoxic potential of Pb pollution, also considering the prevalence of chronic infectious diseases in wildlife in environments affected by mining activities. Copyright © 2013 SETAC.

What Cues Do Ungulates Use to Assess Predation Risk in Dense Temperate Forests?

PubMed Central

Kuijper, Dries P. J.; Verwijmeren, Mart; Churski, Marcin; Zbyryt, Adam; Schmidt, Krzysztof; Jędrzejewska, Bogumiła; Smit, Chris

2014-01-01

Anti-predator responses by ungulates can be based on habitat features or on the near-imminent threat of predators. In dense forest, cues that ungulates use to assess predation risk likely differ from half-open landscapes, as scent relative to sight is predicted to be more important. We studied, in the Białowieża Primeval Forest (Poland), whether perceived predation risk in red deer (Cervus elaphus) and wild boar (Sus scrofa) is related to habitat visibility or olfactory cues of a predator. We used camera traps in two different set-ups to record undisturbed ungulate behavior and fresh wolf (Canis lupus) scats as olfactory cue. Habitat visibility at fixed locations in deciduous old growth forest affected neither vigilance levels nor visitation rate and cumulative visitation time of both ungulate species. However, red deer showed a more than two-fold increase of vigilance level from 22% of the time present on control plots to 46% on experimental plots containing one wolf scat. Higher vigilance came at the expense of time spent foraging, which decreased from 32% to 12% while exposed to the wolf scat. These behavioral changes were most pronounced during the first week of the experiment but continuous monitoring of the plots suggested that they might last for several weeks. Wild boar did not show behavioral responses indicating higher perceived predation risk. Visitation rate and cumulative visitation time were not affected by the presence of a wolf scat in both ungulate species. The current study showed that perceived predation risk in red deer and wild boar is not related to habitat visibility in a dense forest ecosystem. However, olfactory cues of wolves affected foraging behavior of their preferred prey species red deer. We showed that odor of wolves in an ecologically equivalent dose is sufficient to create fine-scale risk factors for red deer. PMID:24404177

Sex-biased severity of sarcoptic mange at the same biological cost in a sexually dimorphic ungulate.

PubMed

López-Olvera, Jorge R; Serrano, Emmanuel; Armenteros, Anna; Pérez, Jesús M; Fandos, Paulino; Carvalho, João; Velarde, Roser; Cano-Manuel, Francisco J; Ráez, Arián; Espinosa, José; Soriguer, Ramón C; Granados, José E

2015-11-10

In sexually dimorphic species, male susceptibility to parasite infection and mortality is frequently higher than in females. The Iberian ibex (Capra pyrenaica) is a sexually dimorphic mountain ungulate endemic to the Iberian Peninsula commonly affected by sarcoptic mange, a chronic catabolic skin disease caused by Sarcoptes scabiei. Since 1992, sarcoptic mange affects the Iberian ibex population of the Sierra Nevada Natural Space (SNNS). This study aims at exploring whether mange severity, in terms of prevalence and its effects on body condition, is male-biased in Iberian ibex. One thousand and seventy-one adult Iberian ibexes (439 females and 632 males) were randomly shot-harvested in the SNNS from May 1995 to February 2008. Sarcoptic mange stage was classified as healthy, mildly infected or severely infected. Sex-biased prevalence of severe mange was evaluated by a Chi-square test whereas the interaction between mange severity and sex on body condition was assessed by additive models. Among scabietic individuals, the prevalence of severely affected males was 1.29 times higher than in females. On the other hand, both sexes were not able to take profit of a higher availability of seasonal food resources when sarcoptic, particularly in the severe stages. Sarcoptic mange severity is male-biased in Iberian ibex, though not mange effects on body condition. Behavioural, immunological and physiological characteristics of males may contribute to this partial sex-biased susceptibility to sarcoptic mange.

Ameliorating conflicts among deer, elk, cattle and/or other ungulates and other forest uses: a synthesis

Treesearch

Russell T. Graham; Theresa B. Jain; James L. Kingery

2010-01-01

In many boreal and temperate forests, ungulates are an important feature valued by many stakeholders. However, conflicts often arise due to the use of a forest by both domestic and wild ungulates and other uses such as timber production, recreation and conservation. In this paper, we present and synthesize several concepts and suggestions that have applicability for...

Markers for Ongoing or Previous Hepatitis E Virus Infection Are as Common in Wild Ungulates as in Humans in Sweden

PubMed Central

Roth, Anette; Lin, Jay; Magnius, Lars; Karlsson, Marie; Belák, Sándór; Widén, Frederik; Norder, Heléne

2016-01-01

Hepatitis E virus (HEV) is a human pathogen with zoonotic spread, infecting both domestic and wild animals. About 17% of the Swedish population is immune to HEV, but few cases are reported annually, indicating that most infections are subclinical. However, clinical hepatitis E may also be overlooked. For identified cases, the source of infection is mostly unknown. In order to identify whether HEV may be spread from wild game, the prevalence of markers for past and/or ongoing infection was investigated in sera and stool samples collected from 260 hunted Swedish wild ungulates. HEV markers were found in 43 (17%) of the animals. The most commonly infected animal was moose (Alces alces) with 19 out of 69 animals (28%) showing HEV markers, followed by wild boar (Sus scrofa) with 21 out of 139 animals (15%), roe deer (Capreolus capreolus) with 2 out of 30 animals, red deer (Cervus elaphus) with 1 out of 15 animals, and fallow deer (Dama dama) 0 out of 7 animals. Partial open reading frame 1 (ORF1) of the viral genomes from the animals were sequenced and compared with those from 14 endemic human cases. Phylogenetic analysis revealed that three humans were infected with HEV strains similar to those from wild boar. These results indicate that wild animals may be a source of transmission to humans and could be an unrecognized public health concern. PMID:27657108

Markers for Ongoing or Previous Hepatitis E Virus Infection Are as Common in Wild Ungulates as in Humans in Sweden.

PubMed

Roth, Anette; Lin, Jay; Magnius, Lars; Karlsson, Marie; Belák, Sándór; Widén, Frederik; Norder, Heléne

2016-09-19

Hepatitis E virus (HEV) is a human pathogen with zoonotic spread, infecting both domestic and wild animals. About 17% of the Swedish population is immune to HEV, but few cases are reported annually, indicating that most infections are subclinical. However, clinical hepatitis E may also be overlooked. For identified cases, the source of infection is mostly unknown. In order to identify whether HEV may be spread from wild game, the prevalence of markers for past and/or ongoing infection was investigated in sera and stool samples collected from 260 hunted Swedish wild ungulates. HEV markers were found in 43 (17%) of the animals. The most commonly infected animal was moose ( Alces alces ) with 19 out of 69 animals (28%) showing HEV markers, followed by wild boar ( Sus scrofa ) with 21 out of 139 animals (15%), roe deer ( Capreolus capreolus ) with 2 out of 30 animals, red deer ( Cervus elaphus ) with 1 out of 15 animals, and fallow deer ( Dama dama ) 0 out of 7 animals. Partial open reading frame 1 (ORF1) of the viral genomes from the animals were sequenced and compared with those from 14 endemic human cases. Phylogenetic analysis revealed that three humans were infected with HEV strains similar to those from wild boar. These results indicate that wild animals may be a source of transmission to humans and could be an unrecognized public health concern.

Wild sheep and deer in Hawai'i: a threat to fragile ecosystems

USGS Publications Warehouse

Hess, Steven C.

2008-01-01

The unique native flora of the Hawaiian Islands, which evolved in the absence of ungulates (grazing animals), is highly vulnerable to damage by trampling and browsing. Wild ungulates introduced into Hawai'i in the past 150 years, including mouflon, axis deer, and mule deer, have severely harmed the native flora. Control measures used against feral animals do not work as well against these wild animals. Trophy hunting tends to alter sex ratios and increase population growth. U.S. Geological Survey scientists are studying these wild ungulates in order to develop more effective control measures that help protect Hawai'i's endemic flora.

SEROPREVALENCE OF NINE LEPTOSPIRA INTERROGANS SEROVARS IN WILD CARNIVORES, UNGULATES, AND PRIMATES FROM A ZOO POPULATION IN A METROPOLITAN REGION OF CHILE.

PubMed

Moreno-Beas, Eduardo; Abalos, Pedro; Hidalgo-Hermoso, Ezequiel

2015-12-01

Serum samples from 130 individuals representing 42 species of carnivores, ungulates, and primates from a population of captive mammals in Metropolitan Region in Chile were tested for antibodies against nine serovars of Leptospira interrogans using the microscopic agglutination test. Ten percent of the animals were seropositive to one or more serovars. Seroprevalence was significantly higher in ungulates (20.4%) compared to carnivores (3.8%) and primates (3.4%). There were no significant differences in seroprevalence among sex and age ranges. The most frequent serovar detected was Autumnalis, present in 53.4% of antibody-positive animals. Most positive animals had titers of ≤1 : 200, except for a maned wolf ( Chrysocyon brachyurus ) with titers of 1 : 400 against serovar Hardjo. To the authors' knowledge, this is the first report of Leptospira exposure detected in native endangered pudu ( Pudu puda ) and the first confirmation of exposure to L. interrogans in captive wild mammals in Chile. Leptospirosis should be considered as a differential diagnosis in future disease presentation for hepatitis or abortions in captive mammals in Chile.

Locking horns with Hawai‘i’s non-native ungulate issues

USGS Publications Warehouse

Hess, Steve

2014-01-01

Conservation and management interests for sustained-yield hunting of non-native ungulates in Hawai‘i have conflicted with the conservation of native biota for several decades. Hawaiian ecosystems evolved in the absence of large mammals and all currently hunted animals in Hawai‘i are non-native species. The best-studied aspects of Hawai‘i’s ungulates have dealt primarily with direct negative effects on native biota in natural areas, but there has been little research in population dynamics for sustained-yield management. Ungulates have been removed from approximately 750 km2 throughout the Hawaiian Islands to protect these natural areas, thereby reducing the amount of land area available for hunting activities and the maintenance of game populations. At the same time, unauthorized introductions of additional wild ungulate species between Hawaiian Islands have recently increased in frequency. The majority of hunting activities are of feral domestic livestock species for subsistence purposes, which typically do not generate sufficient revenue to offset costs of game management. Moreover, bag limits and seasons are generally not determined from biological criteria because harvest reporting is voluntary and game populations are rarely monitored. Consequently, ungulate populations cannot be managed for any particular level of abundance or other objectives. Research and monitoring which emphasize population dynamics and productivity would enable more precisely regulated sustained-yield game management programs and may reduce potential conflicts with the conservation of native biota.

Management of hunting waste as control measure for tuberculosis in wild ungulates in south-central Spain.

PubMed

Cano-Terriza, D; Risalde, M A; Jiménez-Ruiz, S; Vicente, J; Isla, J; Paniagua, J; Moreno, I; Gortázar, C; Infantes-Lorenzo, J A; García-Bocanegra, I

2018-03-13

In recent decades, habitat change and the intensive management of wild ungulates for hunting have led to an increase in their populations in south-central Spain. This implies a higher generation of hunting waste, which can favour the transmission of infectious diseases, including tuberculosis (TB). The aim of this study was to assess the usefulness of the proper disposal of hunting waste as TB control measure in wild boar (Sus scrofa) and red deer (Cervus elaphus) during the 2008/2009 to 2016/2017 hunting seasons. Blood samples from 664 wild boar and 934 red deer were obtained in 14 game estates in two provinces in Andalusia (Area 1), where the disposal of hunting waste was implemented since the 2012/2013 hunting season. Besides, six game estates in the province of Ciudad Real, in Castilla-La Mancha (Area 2), an adjacent region where this management measure was not implemented during the studied period, were used as controls, sampling 277 wild boar and 427 red deer sera. The Mycobacterium tuberculosis complex (MTC), seroprevalence detected in wild boar from Area 1, was significantly higher before the disposal of big game hunting by-products (82.8%; 2008/2009-2012/2013) compared to the second period (61.8%; 2013/2014-2016/2017) (p < .001), after this control measure became established. By contrast, no significant differences between periods were found in wild boar (41.3% versus 44.8%; p = .33) and red deer (14.9% versus 11.6%; p = .19) from Area 2 as well as in red deer (10.8% versus 10.5%; p = .48) from Area 1. The proper disposal of hunting waste contributed to achieve a 25% reduction in MTC seroprevalence in wild boar. These results are of particular relevance regarding wild boar in the current context of re-emerging and emerging diseases such as TB and African Swine Fever in Europe. Further studies are needed to assess the effect of this measure on the health status of livestock and other wildlife species. © 2018 Blackwell Verlag GmbH.

Management of a caseous lymphadenitis outbreak in a new Iberian ibex (Capra pyrenaica) stock reservoir.

PubMed

Colom-Cadena, Andreu; Velarde, Roser; Salinas, Jesús; Borge, Carmen; García-Bocanegra, Ignacio; Serrano, Emmanuel; Gassó, Diana; Bach, Ester; Casas-Díaz, Encarna; López-Olvera, Jorge R; Lavín, Santiago; León-Vizcaíno, Luís; Mentaberre, Gregorio

2014-12-10

In 2010, an Iberian ibex (Capra pyrenaica hispanica) stock reservoir was established for conservation purposes in north-eastern Spain. Eighteen ibexes were captured in the wild and housed in a 17 hectare enclosure. Once in captivity, a caseous lymphadenitis (CLA) outbreak occurred and ibex handlings were carried out at six-month intervals between 2010 and 2013 to perform health examinations and sampling. Treatment with a bacterin-based autovaccine and penicillin G benzatine was added during the third and subsequent handlings, when infection by Corynebacterium pseudotuberculosis was confirmed. Changes in lesion score, serum anti-C. pseudotuberculosis antibodies and haematological parameters were analyzed to assess captivity effects, disease emergence and treatment efficacy. Serum acute phase proteins (APP) Haptoglobin (Hp), Amyloid A (SAA) and Acid Soluble Glycoprotein (ASG) concentrations were also determined to evaluate their usefulness as indicators of clinical status. Once in captivity, 12 out of 14 ibexes (85.7%) seroconverted, preceding the emergence of clinical signs; moreover, TP, WBC, eosinophil and platelet cell counts increased while monocyte and basophil cell counts decreased. After treatment, casualties and fistulas disappeared and both packed cell volume (PCV) and haemoglobin concentration significantly increased. Hp, SAA and ASG values were under the limit of detection or showed no significant differences. A role for captivity in contagion rate is suggested by the increase in antibody levels against C. pseudotuberculosis and the emergence of clinical signs. Although boosted by captivity, this is the first report of an outbreak of caseous lymphadenitis displaying high morbidity and mortality in wild ungulates. Treatment consisting of both vaccination and antibiotic therapy seemed to prevent mortality and alleviate disease severity, but was not reflected in the humoural response. Haematology and APP were not useful indicators in our study, perhaps due

Ungulate ecology of ponderosa pine ecosystems in the northwest

Treesearch

Martin Vavra; Kenric Walburger; Timothy DelCurto

2005-01-01

Ponderosa pine ecosystems provide important foraging habitats for both wild and domestic ungulates. Livestock typically graze ponderosa pine ecosystems from May through October. Mule deer and elk may utilize these habitats on a yearlong basis in some areas. Stand density has a significant effect on understory production. Competition for soil moisture and nitrogen limit...

Wolf predation and snow cover as mortality factors in the ungulate community of the Bialowieża National Park, Poland.

PubMed

Jędrzejewski, Wlodzimierz; Jędrzejewska, Bogumila; Okarma, Henryk; Ruprecht, Andrzej L

1992-04-01

Wolf-ungulate interactions were studied in the pristine deciduous and mixed forests of the Bialowieża National Park in 1985-1989. The study period included two severe and two mild winters. The community of ungulates inhabiting Bialowieża National Park consisted of red deer Cervus elaphus, 55% of all ungulates; wild boar Sus scrofa, 42%; and roe deer Capreolus capreolus, moose Alces alces, and European bison Bison bonasus, about 1% each. The average size of red deer groups increased from 2.7 (SD 2.35) in spring and summer to 6.9 (SD 6.84) in autumn and winter. In winter the group size of red deer was positively correlated with the depth of snow cover and negatively correlated with the mean daily temperature. Average group size of wild boar did not change significantly between seasons; it was 6.8 (SD 5.16) in spring and summer and 5.7 (SD 4.67) in autumn and winter. Analysis of 144 wolf scats showed that wolves preyed selectively on red deer. In October-April, Cervidae (mostly red deer) constituted 91% of biomass consumed by wolves, while wild boar made up only 8%. In May-September deer formed 77% of prey biomass, and the share of wild boar increased to 22%. In all seasons of the year wolves selected juveniles from deer and boar populations: 61% of red deer and 94% of wild boar of determined age recovered from wolves' scats were young <1 year old. Analysis of 117 carcasses of ungulates found in Bialowieża National Park showed that predation was the predominant mortality factor for red deer (40 killed, 10 dead from causes other than predation) and roe deer (4 killed, none dead). Wild boar suffered most from severe winter conditions (8 killed, 56 dead). The percentage of ungulates that had died from undernutrition and starvation in the total mortality was proportional to the severity of winter.

Unraveling the genetic history of the European wild goats

NASA Astrophysics Data System (ADS)

Ureña, I.; Ersmark, E.; Samaniego, J. A.; Galindo-Pellicena, M. A.; Crégut-Bonnoure, E.; Bolívar, H.; Gómez-Olivencia, A.; Rios-Garaizar, J.; Garate, D.; Dalén, L.; Arsuaga, J. L.; Valdiosera, C. E.

2018-04-01

The population history of the Iberian wild goat and the Alpine ibex has been closely related to that of humans since the Palaeolithic. Current molecular and paleontological studies differ substantially on the phylogenetic origin of the European wild goats, possibly due the loss of genetic variation through time. We investigated the phylogenetic relationship between the Alpine ibex (Capra ibex) and the Iberian wild goat (Capra pyrenaica) including different Iberian wild goat subspecies by applying ancient DNA techniques combined with Next Generation Sequencing technologies. We analysed the cytochrome b gene of the mitochondrial genome in 33 ancient and modern European wild goats from Spain and France together with publicly available genetic information of modern wild goats. This work uncovers for the first time ancient genetic information of the Iberian wild goat and the Alpine ibex, spanning a time range of approximately 40,000 years to the present. Our results suggest genetic continuity between ancient and modern populations and indicate a monophyletic origin of the Alpine ibex and the Iberian wild goat when compared to other Capra species. The monophyly of both species is in agreement with other molecular studies based only on modern populations, therefore supporting one-wave migration of wild goats into Western Europe followed by possible allopatric speciation. We observe three major clades of wild goats in Western Europe: Capra ibex, Capra pyrenaica pyrenaica and the group containing the subspecies Capra pyrenaica hispanica and Capra pyrenaica victoriae. This genetic structure recognizes the distinctiveness of the bucardo (C. p. pyrenaica) from the rest of Iberian wild goats and thus supports the idea that this group is an Evolutionary Significant Unit. The divergence time estimated here indicates an almost contemporaneous split between the three clades around 50,000-90,000 years BP.

Identification and phylogenetic analysis of novel cytochrome P450 1A genes from ungulate species.

PubMed

Darwish, Wageh Sobhy; Kawai, Yusuke; Ikenaka, Yoshinori; Yamamoto, Hideaki; Muroya, Tarou; Ishizuka, Mayumi

2010-09-01

As part of an ongoing effort to understand the biological response of wild and domestic ungulates to different environmental pollutants such as dioxin-like compounds, cDNAs encoding for CYP1A1 and CYP1A2 were cloned and characterized. Four novel CYP1A cDNA fragments from the livers of four wild ungulates (elephant, hippopotamus, tapir and deer) were identified. Three fragments from hippopotamus, tapir and deer were classified as CYP1A2, and the other fragment from elephant was designated as CYP1A1/2. The deduced amino acid sequences of these fragment CYP1As showed identities ranging from 76 to 97% with other animal CYP1As. The phylogenetic analysis of these fragments showed that both elephant and hippopotamus CYP1As made separate branches, while tapir and deer CYP1As were located beside that of horse and cattle respectively in the phylogenetic tree. Analysis of dN/dS ratio among the identified CYP1As indicated that odd toed ungulate CYP1A2s were exposed to different selection pressure.

Southern dispersal and Palaeoecological implications of woolly rhinoceros ( Coelodonta antiquitatis): review of the Iberian occurrences

NASA Astrophysics Data System (ADS)

Álvarez-Lao, Diego J.; García, Nuria

2011-07-01

Cold-adapted large mammal populations spread southward during the coldest and driest phases of the Late Pleistocene reaching the Iberian Peninsula. Presence of woolly rhinoceros ( Coelodonta antiquitatis) can be identified from 23 Iberian sites, which is compiled and analyzed herein, and the fossil specimens from seven of these sites are described here for first time. Morphological and biometrical analyses demonstrate that the Iberian woolly rhinoceros did not significantly differ from individuals of other European populations, but represent the westernmost part of a continuous Eurasian belt of distribution. The first presence of woolly rhino in the Iberian Peninsula has been identified during the late Middle Pleistocene and early Late Pleistocene. However, the highest abundance of this species is recorded during MIS 3 and 2. The latest Iberian occurrences can be dated around 20 ka BP. The presence of woolly rhinoceros in the Iberian Peninsula correlates with periods of extreme dry and cold climatic conditions documented in Iberian terrestrial and marine sediment sequences. From a palaeobiogeographic point of view, the maximum southern spread of C. antiquitatis on the Iberian Peninsula was registered during the late Middle Pleistocene or early Late Pleistocene, reaching the latitude of Madrid (about 40°N). Subsequently, during MIS 3 and 2, all Iberian finds were restricted to the Northern regions of Iberia (Cantabrian area and Catalonia). The southern expansion of C. antiquitatis during the Late Pleistocene in the Iberian Peninsula reached similar latitudes to other Eurasian regions. The ecological composition of fossil assemblages with presence of woolly rhinoceros was statistically analyzed. Results show that temperate ungulate species are predominant at Iberian assemblages, resulting in a particular mixture of temperate and cold elements different of the typical Eurasian cold-adapted faunal associations. This particular situation suggests two possible

Standardizing the double-observer survey method for estimating mountain ungulate prey of the endangered snow leopard.

PubMed

Suryawanshi, Kulbhushansingh R; Bhatnagar, Yash Veer; Mishra, Charudutt

2012-07-01

Mountain ungulates around the world have been threatened by illegal hunting, habitat modification, increased livestock grazing, disease and development. Mountain ungulates play an important functional role in grasslands as primary consumers and as prey for wild carnivores, and monitoring of their populations is important for conservation purposes. However, most of the several currently available methods of estimating wild ungulate abundance are either difficult to implement or too expensive for mountainous terrain. A rigorous method of sampling ungulate abundance in mountainous areas that can allow for some measure of sampling error is therefore much needed. To this end, we used a combination of field data and computer simulations to test the critical assumptions associated with double-observer technique based on capture-recapture theory. The technique was modified and adapted to estimate the populations of bharal (Pseudois nayaur) and ibex (Capra sibirica) at five different sites. Conducting the two double-observer surveys simultaneously led to underestimation of the population by 15%. We therefore recommend separating the surveys in space or time. The overall detection probability for the two observers was 0.74 and 0.79. Our surveys estimated mountain ungulate populations (± 95% confidence interval) of 735 (± 44), 580 (± 46), 509 (± 53), 184 (± 40) and 30 (± 14) individuals at the five sites, respectively. A detection probability of 0.75 was found to be sufficient to detect a change of 20% in populations of >420 individuals. Based on these results, we believe that this method is sufficiently precise for scientific and conservation purposes and therefore recommend the use of the double-observer approach (with the two surveys separated in time or space) for the estimation and monitoring of mountain ungulate populations.

Identifying Conservation Successes, Failures and Future Opportunities; Assessing Recovery Potential of Wild Ungulates and Tigers in Eastern Cambodia

PubMed Central

O'Kelly, Hannah J.; Evans, Tom D.; Stokes, Emma J.; Clements, Tom J.; Dara, An; Gately, Mark; Menghor, Nut; Pollard, Edward H. B.; Soriyun, Men; Walston, Joe

2012-01-01

Conservation investment, particularly for charismatic and wide-ranging large mammal species, needs to be evidence-based. Despite the prevalence of this theme within the literature, examples of robust data being generated to guide conservation policy and funding decisions are rare. We present the first published case-study of tiger conservation in Indochina, from a site where an evidence-based approach has been implemented for this iconic predator and its prey. Despite the persistence of extensive areas of habitat, Indochina's tiger and ungulate prey populations are widely supposed to have precipitously declined in recent decades. The Seima Protection Forest (SPF), and broader Eastern Plains Landscape, was identified in 2000 as representing Cambodia's best hope for tiger recovery; reflected in its designation as a Global Priority Tiger Conservation Landscape. Since 2005 distance sampling, camera-trapping and detection-dog surveys have been employed to assess the recovery potential of ungulate and tiger populations in SPF. Our results show that while conservation efforts have ensured that small but regionally significant populations of larger ungulates persist, and density trends in smaller ungulates are stable, overall ungulate populations remain well below theoretical carrying capacity. Extensive field surveys failed to yield any evidence of tiger, and we contend that there is no longer a resident population within the SPF. This local extirpation is believed to be primarily attributable to two decades of intensive hunting; but importantly, prey densities are also currently below the level necessary to support a viable tiger population. Based on these results and similar findings from neighbouring sites, Eastern Cambodia does not currently constitute a Tiger Source Site nor meet the criteria of a Global Priority Tiger Landscape. However, SPF retains global importance for many other elements of biodiversity. It retains high regional importance for ungulate

Identifying conservation successes, failures and future opportunities; assessing recovery potential of wild ungulates and tigers in Eastern Cambodia.

PubMed

O'Kelly, Hannah J; Evans, Tom D; Stokes, Emma J; Clements, Tom J; Dara, An; Gately, Mark; Menghor, Nut; Pollard, Edward H B; Soriyun, Men; Walston, Joe

2012-01-01

Conservation investment, particularly for charismatic and wide-ranging large mammal species, needs to be evidence-based. Despite the prevalence of this theme within the literature, examples of robust data being generated to guide conservation policy and funding decisions are rare. We present the first published case-study of tiger conservation in Indochina, from a site where an evidence-based approach has been implemented for this iconic predator and its prey. Despite the persistence of extensive areas of habitat, Indochina's tiger and ungulate prey populations are widely supposed to have precipitously declined in recent decades. The Seima Protection Forest (SPF), and broader Eastern Plains Landscape, was identified in 2000 as representing Cambodia's best hope for tiger recovery; reflected in its designation as a Global Priority Tiger Conservation Landscape. Since 2005 distance sampling, camera-trapping and detection-dog surveys have been employed to assess the recovery potential of ungulate and tiger populations in SPF. Our results show that while conservation efforts have ensured that small but regionally significant populations of larger ungulates persist, and density trends in smaller ungulates are stable, overall ungulate populations remain well below theoretical carrying capacity. Extensive field surveys failed to yield any evidence of tiger, and we contend that there is no longer a resident population within the SPF. This local extirpation is believed to be primarily attributable to two decades of intensive hunting; but importantly, prey densities are also currently below the level necessary to support a viable tiger population. Based on these results and similar findings from neighbouring sites, Eastern Cambodia does not currently constitute a Tiger Source Site nor meet the criteria of a Global Priority Tiger Landscape. However, SPF retains global importance for many other elements of biodiversity. It retains high regional importance for ungulate

Minimizing predation risk in a landscape of multiple predators: effects on the spatial distribution of African ungulates.

PubMed

Thaker, Maria; Vanak, Abi T; Owen, Cailey R; Ogden, Monika B; Niemann, Sophie M; Slotow, Rob

2011-02-01

Studies that focus on single predator-prey interactions can be inadequate for understanding antipredator responses in multi-predator systems. Yet there is still a general lack of information about the strategies of prey to minimize predation risk from multiple predators at the landscape level. Here we examined the distribution of seven African ungulate species in the fenced Karongwe Game Reserve (KGR), South Africa, as a function of predation risk from all large carnivore species (lion, leopard, cheetah, African wild dog, and spotted hyena). Using observed kill data, we generated ungulate-specific predictions of relative predation risk and of riskiness of habitats. To determine how ungulates minimize predation risk at the landscape level, we explicitly tested five hypotheses consisting of strategies that reduce the probability of encountering predators, and the probability of being killed. All ungulate species avoided risky habitats, and most selected safer habitats, thus reducing their probability of being killed. To reduce the probability of encountering predators, most of the smaller prey species (impala, warthog, waterbuck, kudu) avoided the space use of all predators, while the larger species (wildebeest, zebra, giraffe) only avoided areas where lion and leopard space use were high. The strength of avoidance for the space use of predators generally did not correspond to the relative predation threat from those predators. Instead, ungulates used a simpler behavioral rule of avoiding the activity areas of sit-and-pursue predators (lion and leopard), but not those of cursorial predators (cheetah and African wild dog). In general, selection and avoidance of habitats was stronger than avoidance of the predator activity areas. We expect similar decision rules to drive the distribution pattern of ungulates in other African savannas and in other multi-predator systems, especially where predators differ in their hunting modes.

Unforeseen effects of supplementary feeding: ungulate baiting sites as hotspots for ground-nest predation.

PubMed

Selva, Nuria; Berezowska-Cnota, Teresa; Elguero-Claramunt, Isabel

2014-01-01

Despite the ubiquity and magnitude of food provision to wildlife, our understanding of its ecological effects and conservation implications is very limited. Supplementary feeding of ungulates, still one of the main paradigms of game management in Europe, occurs in natural areas on an enormous scale. We investigated the indirect effects of this practice on nest predation risk in the Polish Eastern Carpathians (Bieszczady Mountains). We hypothesized that the predators attracted to ungulate baiting sites would also forage for alternative prey nearby, increasing the nest predation risk for ground-nesting birds in the vicinity. We conducted a paired experiment by placing artificial nests (N=120) in feeding and control sites (N=12) at different distances from the ungulate feeding site. We also documented the use of three ungulate feeding sites by potential nest predators with automatic cameras. The proportion of depredated nests was 30% higher in the vicinity of feeding sites than at control sites (65%± 31.5 vs 35%± 32.1). The probability of a nest being depredated significantly increased with time and at shorter distances from the feeding site. We predicted that the area within 1-km distance from the feeding site would have a high risk (>0.5) of nest predation. We recorded 13 species of potential ground-nest predators at ungulate baiting sites. Most frequent were Eurasian jays Garrulus glandarius, mice and voles Muroidea, ravens Corvus corax, brown bears Ursus arctos, and wild boar Sus scrofa. Nest predators made most use of supplementary feeding sites (82% pictures with predators vs 8% with ungulates, the target group). Our study alerts of the impacts of ungulate feeding on alternative prey; this is of special concern when affecting protected species. We urge for a sensible management of ungulate feeding, which considers potential indirect effects on other species and the spatial and temporal components of food provision.

Acquired antibiotic resistance among wild animals: the case of Iberian Lynx (Lynx pardinus).

PubMed

Sousa, Margarida; Gonçalves, Alexandre; Silva, Nuno; Serra, Rodrigo; Alcaide, Eva; Zorrilla, Irene; Torres, Carmen; Caniça, Manuela; Igrejas, Gilberto; Poeta, Patrícia

2014-01-01

The selective pressure generated by the clinical misuse of antibiotics has been the major driving force leading to the emergence of antibiotic resistance among bacteria. Antibiotics or even resistant bacteria are released into the environment and contaminate the surrounding areas. Human and animal populations in contact with these sources are able to become reservoirs of these resistant organisms. Then, due to the convergence between habitats, the contact of wild animals with other animals, humans, or human sources is now more common and this leads to an increase in the exchange of resistance determinants between their microbiota. Indeed, it seems that wildlife populations living in closer proximity to humans have higher levels of antibiotic resistance. Now, the Iberian Lynx (Lynx pardinus) is a part of this issue, being suggested as natural reservoir of acquired resistant bacteria. The emerging public health concern regarding microbial resistance to antibiotics is becoming true: the bacteria are evolving and are now affecting unintentional hosts.

Prepartum Maternal Behavior of Domesticated Cattle: A Comparison with Managed, Feral, and Wild Ungulates

PubMed Central

Rørvang, Maria Vilain; Nielsen, Birte L.; Herskin, Mette S.; Jensen, Margit Bak

2018-01-01

The event of giving birth is an essential part of animal production. In dairy cattle production, there are substantial economical and welfare-related challenges arising around the time of parturition, and hence increased focus on efficient management of the calving cow. Drawing on the research literature on prepartum maternal behavior, this review compares cattle to other members of the ungulate clade with the aim of understanding the biological basis of bovine prepartum behavior with main emphasis on dairy cows. Ultimately, this knowledge may be used in future development of housing systems and recommendations for the management of calving cows. Maternal prepartum behavior varies among species, but the final goal of ungulate mothers is the same: ensuring a calm parturition and optimal environment for the onset of postpartum maternal behavior by locating an appropriate birth site, with low risk of predators, disturbances and mistaken identity of offspring. Features of chosen birth sites vary among species and depend largely on the environment, as ungulate females display a considerable ability to adapt to their surroundings. However, within commercial housing conditions in dairy production, the animals’ ability to adapt behaviorally appears to be challenged. Confinement alongside high stocking densities leave little room to express birth-site selection behavior, posing a high risk of agonistic social behavior, disturbances, and mismothering, as well as exposure to olfactory cues influencing both prepartum and postpartum maternal behavior. Dairy cows are thus exposed to several factors in a commercial calving environment, which may thwart their maternal motivations and influence their behavior. In addition, prepartum cattle may be more affected by olfactory cues than other ungulate species (e.g., sheep) because they are attracted to birth fluids already before calving. Hence, providing dairy cows with an environment where they can perform the maternal behavior

How does a carnivore guild utilise a substantial but unpredictable anthropogenic food source? Scavenging on hunter-shot ungulate carcasses by wild dogs/dingoes, red foxes and feral cats in south-eastern Australia revealed by camera traps.

PubMed

Forsyth, David M; Woodford, Luke; Moloney, Paul D; Hampton, Jordan O; Woolnough, Andrew P; Tucker, Mark

2014-01-01

There is much interest in understanding how anthropogenic food resources subsidise carnivore populations. Carcasses of hunter-shot ungulates are a potentially substantial food source for mammalian carnivores. The sambar deer (Rusa unicolor) is a large (≥ 150 kg) exotic ungulate that can be hunted throughout the year in south-eastern Australia, and hunters are not required to remove or bury carcasses. We investigated how wild dogs/dingoes and their hybrids (Canis lupus familiaris/dingo), red foxes (Vulpes vulpes) and feral cats (Felis catus) utilised sambar deer carcasses during the peak hunting seasons (i.e. winter and spring). We placed carcasses at 1-km intervals along each of six transects that extended 4-km into forest from farm boundaries. Visits to carcasses were monitored using camera traps, and the rate of change in edible biomass estimated at ∼ 14-day intervals. Wild dogs and foxes fed on 70% and 60% of 30 carcasses, respectively, but feral cats seldom (10%) fed on carcasses. Spatial and temporal patterns of visits to carcasses were consistent with the hypothesis that foxes avoid wild dogs. Wild dog activity peaked at carcasses 2 and 3 km from farms, a likely legacy of wild dog control, whereas fox activity peaked at carcasses 0 and 4 km from farms. Wild dog activity peaked at dawn and dusk, whereas nearly all fox activity occurred after dusk and before dawn. Neither wild dogs nor foxes remained at carcasses for long periods and the amount of feeding activity by either species was a less important predictor of the loss of edible biomass than season. Reasons for the low impacts of wild dogs and foxes on sambar deer carcass biomass include the spatially and temporally unpredictable distribution of carcasses in the landscape, the rapid rate of edible biomass decomposition in warm periods, low wild dog densities and the availability of alternative food resources.

Mitochondrial haplotype variation and phylogeography of Iberian brown trout populations.

PubMed

MacHordom, A; Suárez, J; Almodóvar, A; Bautista, J M

2000-09-01

The biogeographical distribution of brown trout mitochondrial DNA haplotypes throughout the Iberian Peninsula was established by polymerase chain reaction-restriction fragment polymorphism analysis. The study of 507 specimens from 58 localities representing eight widely separated Atlantic-slope (north and west Iberian coasts) and six Mediterranean drainage systems served to identify five main groups of mitochondrial haplotypes: (i) haplotypes corresponding to non-native, hatchery-reared brown trout that were widely distributed but also found in wild populations of northern Spain (Cantabrian slope); (ii) a widespread Atlantic haplotype group; (iii) a haplotype restricted to the Duero Basin; (iv) a haplotype shown by southern Iberian populations; and (v) a Mediterranean haplotype. The Iberian distribution of these haplotypes reflects both the current fishery management policy of introducing non-native brown trout, and Messinian palaeobiogeography. Our findings complement and extend previous allozyme studies on Iberian brown trout and improve present knowledge of glacial refugia and postglacial movement of brown trout lineages.

Shiga toxins, and the genes encoding them, in fecal samples from native Idaho ungulates.

PubMed

Gilbreath, Jeremy J; Shields, Malcolm S; Smith, Rebekah L; Farrell, Larry D; Sheridan, Peter P; Spiegel, Kathleen M

2009-02-01

Cattle are a known reservoir of Shiga toxin-producing Escherichia coli. The prevalence and stability of Shiga toxin and/or Shiga toxin genes among native wild ungulates in Idaho were investigated. The frequency of both Shiga genes and toxin was similar to that reported for Idaho cattle ( approximately 19%).

Impact of wild prey availability on livestock predation by snow leopards.

PubMed

Suryawanshi, Kulbhushansingh R; Redpath, Stephen M; Bhatnagar, Yash Veer; Ramakrishnan, Uma; Chaturvedi, Vaibhav; Smout, Sophie C; Mishra, Charudutt

2017-06-01

An increasing proportion of the world's poor is rearing livestock today, and the global livestock population is growing. Livestock predation by large carnivores and their retaliatory killing is becoming an economic and conservation concern. A common recommendation for carnivore conservation and for reducing predation on livestock is to increase wild prey populations based on the assumption that the carnivores will consume this alternative food. Livestock predation, however, could either reduce or intensify with increases in wild prey depending on prey choice and trends in carnivore abundance. We show that the extent of livestock predation by the endangered snow leopard Panthera uncia intensifies with increases in the density of wild ungulate prey, and subsequently stabilizes. We found that snow leopard density, estimated at seven sites, was a positive linear function of the density of wild ungulates-the preferred prey-and showed no discernible relationship with livestock density. We also found that modelled livestock predation increased with livestock density. Our results suggest that snow leopard conservation would benefit from an increase in wild ungulates, but that would intensify the problem of livestock predation for pastoralists. The potential benefits of increased wild prey abundance in reducing livestock predation can be overwhelmed by a resultant increase in snow leopard populations. Snow leopard conservation efforts aimed at facilitating increases in wild prey must be accompanied by greater assistance for better livestock protection and offsetting the economic damage caused by carnivores.

Benefits of migration in a partially-migratory tropical ungulate

PubMed Central

2013-01-01

Background Partial migration, where one portion of a population conducts seasonal migrations while the other remains on a single range, is common in wild ungulate populations. However the relative costs and benefits associated with the distinct strategies adopted by coexisting migrant and resident individuals have rarely been investigated. Here we compare the body condition of migrants and residents in a partially migratory population of impalas (Aepyceros melampus) in Zimbabwe. The study was conducted during two consecutive years with highly contrasted population densities (16.4 and 8.6 indiv/km2) due to harvesting. Results We first identify a population substructure with a north–south sub-division in two spatial units related to distinct soils and vegetation cover. Impalas in the north range had a consistently higher diet quality and body condition than those in the south range. At the beginning of the dry season about one third of the individuals migrated from the lower (i.e. south) to the higher (i.e. north) diet quality range. This partial migration pattern was consistent between the consecutive years, and most individuals showed constancy to their moving strategy (migrant or resident). In both years, these migrants had a significantly higher body condition at the end of the dry season than the south residents that remained year-round in the lower diet quality range. Diet quality and body condition of impalas were higher in the year of lower density; however we did not detect any evidence for density-dependence in migration propensity, at the individual or population levels, nor in the benefit associated with migration. Conclusions Our findings provide rare evidence for a significant relationship between body condition and seasonal migration strategy in wild ungulates in relation to a difference in the quality of resources acquired between distinct seasonal ranges. This study also constitutes rare evidence of partial migration in a tropical ungulate

How Does a Carnivore Guild Utilise a Substantial but Unpredictable Anthropogenic Food Source? Scavenging on Hunter-Shot Ungulate Carcasses by Wild Dogs/Dingoes, Red Foxes and Feral Cats in South-Eastern Australia Revealed by Camera Traps

PubMed Central

Forsyth, David M.; Woodford, Luke; Moloney, Paul D.; Hampton, Jordan O.; Woolnough, Andrew P.; Tucker, Mark

2014-01-01

There is much interest in understanding how anthropogenic food resources subsidise carnivore populations. Carcasses of hunter-shot ungulates are a potentially substantial food source for mammalian carnivores. The sambar deer (Rusa unicolor) is a large (≥150 kg) exotic ungulate that can be hunted throughout the year in south-eastern Australia, and hunters are not required to remove or bury carcasses. We investigated how wild dogs/dingoes and their hybrids (Canis lupus familiaris/dingo), red foxes (Vulpes vulpes) and feral cats (Felis catus) utilised sambar deer carcasses during the peak hunting seasons (i.e. winter and spring). We placed carcasses at 1-km intervals along each of six transects that extended 4-km into forest from farm boundaries. Visits to carcasses were monitored using camera traps, and the rate of change in edible biomass estimated at ∼14-day intervals. Wild dogs and foxes fed on 70% and 60% of 30 carcasses, respectively, but feral cats seldom (10%) fed on carcasses. Spatial and temporal patterns of visits to carcasses were consistent with the hypothesis that foxes avoid wild dogs. Wild dog activity peaked at carcasses 2 and 3 km from farms, a likely legacy of wild dog control, whereas fox activity peaked at carcasses 0 and 4 km from farms. Wild dog activity peaked at dawn and dusk, whereas nearly all fox activity occurred after dusk and before dawn. Neither wild dogs nor foxes remained at carcasses for long periods and the amount of feeding activity by either species was a less important predictor of the loss of edible biomass than season. Reasons for the low impacts of wild dogs and foxes on sambar deer carcass biomass include the spatially and temporally unpredictable distribution of carcasses in the landscape, the rapid rate of edible biomass decomposition in warm periods, low wild dog densities and the availability of alternative food resources. PMID:24918425

Comparative sensitivity to environmental variation and human disturbance of Asian tapirs (Tapirus indicus) and other wild ungulates in Thailand.

PubMed

Lynam, Antony J; Tantipisanuh, Naruemon; Chutipong, Wanlop; Ngoprasert, Dusit; Baker, Megan C; Cutter, Passanan; Gale, George; Kitamura, Shumpei; Steinmetz, Robert; Sukmasuang, Ronglarp; Thunhikorn, Somying

2012-12-01

Southeast Asia's tropical forests suffer the highest rates of deforestation and disturbance of any on Earth, with poorly understood impacts on native fauna. Asian tapirs (Tapirus indicus) are among the least studied of the large mammals in these forests. Using records from 9 camera trap surveys in 7 of the largest (>1000 km(2) ) protected area complexes, we assessed the influence of environmental variation and human-induced disturbance on tapir occurrence. Tapirs were detected at 13% of locations sampled, significantly associated with evergreen forest (P < 0.001). A multiple logistic regression model predicted tapir presence 87% of the time. According to this model, tapir occurrence was positively influenced by annual rainfall and proximity to the forest edge. However, tapirs may not avoid edges but instead prefer wetter evergreen forest, a habitat type that tended to occur further from the forest edge at higher elevations in our particular study sites (P < 0.001). By comparison, 4 other wild ungulate species that share habitats with tapirs showed a range of differing responses. Tapirs are expected to be less sensitive to disturbance because they are not targets for hunting and trade, and are almost entirely active at night, so avoid peak traffic periods in parks. Tapir populations in Thailand may be more stable than in other parts of their global range because rates of forest loss have decreased >40% over the past 20 years. We recommend surveys to fill gaps in the understanding of the status in lesser-known protected areas, research to better understand the fine-scale environmental influences on behavior and habitats of tapirs, and other forest ungulates, and continued legal status for tapirs in the highest category of protection. © 2012 Wiley Publishing Asia Pty Ltd, ISZS and IOZ/CAS.

Impacts of climate change on distributions and diversity of ungulates on the Tibetan Plateau.

PubMed

Luo, Zhenhua; Jiang, Zhigang; Tang, Songhua

2015-01-01

Climate change has significant impacts on species' distributions and diversity patterns. Understanding range shifts and changes in richness gradients under climate change is crucial for conservation. The Tibetan Plateau, home to wild yak, chiru, and kiang, contains a biome with many endemic ungulates. It is highly sensitive to climate change and a region that merits particular attention with regard to the impacts of global climate change on its biomes. Maximum entropy approaches were used to estimate current and future potential distributions, in response to climate change, for 22 ungulate species. We used three general circulation (MK3, HADCM3, MIROC3_2-MED) and three emissions scenarios (Bl, A1B, A2) to derive estimated future measurements of 14 environmental variables over three time periods (2020, 2050, 2080), and then modeled species distributions using these predicted environmental measurements for each time period under two dispersal hypotheses (full and zero, respectively). This resulted in a total of 6160 prediction models. We found that these ungulates, on average, may lose 30-50% of their distributional areas, depending on the dispersal scenarios. In addition, 55-68% of the ungulate species were predicted to become locally endangered under the different dispersal assumptions, 23-32% to become locally critically endangered, and 4-7 endemic species to become globally endangered. Furthermore, ungulate species ranges may experience average poleward shifts of ~300 km. We also predict west-to-east reductions in species richness: southeastern mountainous areas currently have the highest species richness, but are predicted to face the greatest diversity losses, whereas the northern areas are predicted to see increasing numbers of ungulate species in the 21st century. Our study indicates much more severe range reductions of ungulates on the Tibetan Plateau than those anticipated elsewhere in the world, and species richness patterns will change dramatically with

Potential ungulate prey for Gray Wolves

USGS Publications Warehouse

Singer, Francis J.; Mack, John A.

1993-01-01

Data were gathered for six ungulate species that reside in or near Yellowstone National Park. If gray wolves (Canis lupus) are reintroduced into the Yellowstone area, their avoidance of human activities or their management by human may determine their range. Therefore, the area of wolf occupation cannot be predicted now. We restricted our analysis to Yellowstone National Park and to the adjacent national forest wilderness areas. We included mostly ungulate herds that summer inside or adjacent to the park and that would probably be affected by wolves. Our wolf study area includes Yellowstone National Park and adjacent wilderness areas most likely to be occupied by wolves. We reviewed publications, park records, survey reports, and state fish and game surveys and reports for statistics on ungulate populations. These data [provide an overview of ungulate populations and harvests. Each ungulate herd is described in detail. We restricted our analysis to 1980-89, because population surveys were more complete during that period and because population estimates of most ungulate populations had increased by the 1980's. We feel the higher estimates of the 1980's reflect more up-to-date techniques and are most representative of the situation into which the wolves would be reintroduced.

Evolution and genome specialization of Brucella suis biovar 2 Iberian lineages.

PubMed

Ferreira, Ana Cristina; Tenreiro, Rogério; de Sá, Maria Inácia Corrêa; Dias, Ricardo

2017-09-12

Swine brucellosis caused by B. suis biovar 2 is an emergent disease in domestic pigs in Europe. The emergence of this pathogen has been linked to the increase of extensive pig farms and the high density of infected wild boars (Sus scrofa). In Portugal and Spain, the majority of strains share specific molecular characteristics, which allowed establishing an Iberian clonal lineage. However, several strains isolated from wild boars in the North-East region of Spain are similar to strains isolated in different Central European countries. Comparative analysis of five newly fully sequenced B. suis biovar 2 strains belonging to the main circulating clones in Iberian Peninsula, with publicly available Brucella spp. genomes, revealed that strains from Iberian clonal lineage share 74% similarity with those reference genomes. Besides the 210 kb translocation event present in all biovar 2 strains, an inversion with 944 kb was presented in chromosome I of strains from the Iberian clone. At left and right crossover points, the inversion disrupted a TRAP dicarboxylate transporter, DctM subunit, and an integral membrane protein TerC. The gene dctM is well conserved in Brucella spp. except in strains from the Iberian clonal lineage. Intraspecies comparative analysis also exposed a number of biovar-, haplotype- and strain-specific insertion-deletion (INDELs) events and single nucleotide polymorphisms (SNPs) that could explain differences in virulence and host specificities. Most discriminative mutations were associated to membrane related molecules (29%) and enzymes involved in catabolism processes (20%). Molecular identification of both B. suis biovar 2 clonal lineages could be easily achieved using the target-PCR procedures established in this work for the evaluated INDELs. Whole-genome analyses supports that the B. suis biovar 2 Iberian clonal lineage evolved from the Central-European lineage and suggests that the genomic specialization of this pathogen in the Iberian Peninsula

Life-history strategies of ungulates

USGS Publications Warehouse

Leslie, David M.; Bowyer, R.T.; Kie, J.G.

1999-01-01

This Special Feature resulted from a symposium on life-history strategies of ungulates presented at the 78th Annual Meeting of the American Society of Mammalogists in Blacksburg, Virginia, in June 1998. The presentations at the symposium represented only a vignette of the wide variety of life-history strategies that exists among ungulates. The four papers that follow include treatises on birth-site selection of moose (Alces alces), sex-ratio correlates with dimorphism and risk of predation, optimal foraging relative to risk of predation, and the role of density dependence in shaping life-history traits of ungulates. A theme of risk of predation in shaping life-history traits is common to three of four papers.

Assessing the potential spread and maintenance of foot-and-mouth disease virus infection in wild ungulates: general principles and application to a specific scenario in Thrace.

PubMed

Dhollander, S; Belsham, G J; Lange, M; Willgert, K; Alexandrov, T; Chondrokouki, E; Depner, K; Khomenko, S; Özyörük, F; Salman, M; Thulke, H H; Bøtner, A

2016-04-01

Foot-and-mouth disease (FMD), due to infection with serotype O virus, occurred in wild boar and within eleven outbreaks in domestic livestock in the south-east of Bulgaria, Thrace region, in 2011. Hence, the issue of the potential for the spread and maintenance of FMD virus (FMDV) infection in a population of wild ungulates became important. This assessment focused on the spread and maintenance of FMDV infection within a hypothetical wild boar and deer population in an environment, which is characterized by a climate transitional between Mediterranean and continental and variable wildlife population densities. The assessment was based on three aspects: (i) a systematic review of the literature focusing on experimental infection studies to identify the parameters describing the duration of FMDV infection in deer and wild boar, as well as observational studies assessing the occurrence of FMDV infection in wild deer and wild boar populations, (ii) prevalence survey data of wild boar and deer in Bulgaria and Turkey and (iii) an epidemiological model, simulating the host-to-host spread of FMDV infections. It is concluded, based on all three aspects, that the wildlife population in Thrace, and so wildlife populations in similar ecological settings, are probably not able to maintain FMD in the long term in the absence of FMDV infection in the domestic host population. However, limited spread of FMDV infection in time and space in the wildlife populations can occur. If there is a continued cross-over of FMDV between domestic and wildlife populations or a higher population density, virus circulation may be prolonged. © 2014 Blackwell Verlag GmbH.

Traditional knowledge of wild edible plants used in the northwest of the Iberian Peninsula (Spain and Portugal): a comparative study

PubMed Central

Pardo-de-Santayana, Manuel; Tardío, Javier; Blanco, Emilio; Carvalho, Ana Maria; Lastra, Juan José; San Miguel, Elia; Morales, Ramón

2007-01-01

Background We compare traditional knowledge and use of wild edible plants in six rural regions of the northwest of the Iberian Peninsula as follows: Campoo, Picos de Europa, Piloña, Sanabria and Caurel in Spain and Parque Natural de Montesinho in Portugal. Methods Data on the use of 97 species were collected through informed consent semi-structured interviews with local informants. A semi-quantitative approach was used to document the relative importance of each species and to indicate differences in selection criteria for consuming wild food species in the regions studied. Results and discussion The most significant species include many wild berries and nuts (e.g. Castanea sativa, Rubus ulmifolius, Fragaria vesca) and the most popular species in each food-category (e.g. fruits or herbs used to prepare liqueurs such as Prunus spinosa, vegetables such as Rumex acetosa, condiments such as Origanum vulgare, or plants used to prepare herbal teas such as Chamaemelum nobile). The most important species in the study area as a whole are consumed at five or all six of the survey sites. Conclusion Social, economic and cultural factors, such as poor communications, fads and direct contact with nature in everyday life should be taken into account in determining why some wild foods and traditional vegetables have been consumed, but others not. They may be even more important than biological factors such as richness and abundance of wild edible flora. Although most are no longer consumed, demand is growing for those regarded as local specialties that reflect regional identity. PMID:17555572

A Bayesian approach to study the risk variables for tuberculosis occurrence in domestic and wild ungulates in South Central Spain.

PubMed

Rodríguez-Prieto, Víctor; Martínez-López, Beatriz; Barasona, José Angel; Acevedo, Pelayo; Romero, Beatriz; Rodriguez-Campos, Sabrina; Gortázar, Christian; Sánchez-Vizcaíno, José Manuel; Vicente, Joaquín

2012-08-30

Bovine tuberculosis (bTB) is a chronic infectious disease mainly caused by Mycobacterium bovis. Although eradication is a priority for the European authorities, bTB remains active or even increasing in many countries, causing significant economic losses. The integral consideration of epidemiological factors is crucial to more cost-effectively allocate control measures. The aim of this study was to identify the nature and extent of the association between TB distribution and a list of potential risk factors regarding cattle, wild ungulates and environmental aspects in Ciudad Real, a Spanish province with one of the highest TB herd prevalences. We used a Bayesian mixed effects multivariable logistic regression model to predict TB occurrence in either domestic or wild mammals per municipality in 2007 by using information from the previous year. The municipal TB distribution and endemicity was clustered in the western part of the region and clearly overlapped with the explanatory variables identified in the final model: (1) incident cattle farms, (2) number of years of veterinary inspection of big game hunting events, (3) prevalence in wild boar, (4) number of sampled cattle, (5) persistent bTB-infected cattle farms, (6) prevalence in red deer, (7) proportion of beef farms, and (8) farms devoted to bullfighting cattle. The combination of these eight variables in the final model highlights the importance of the persistence of the infection in the hosts, surveillance efforts and some cattle management choices in the circulation of M. bovis in the region. The spatial distribution of these variables, together with particular Mediterranean features that favour the wildlife-livestock interface may explain the M. bovis persistence in this region. Sanitary authorities should allocate efforts towards specific areas and epidemiological situations where the wildlife-livestock interface seems to critically hamper the definitive bTB eradication success.

Do ungulates accelerate or decelerate nitrogen cycling?

USGS Publications Warehouse

Singer, F.J.; Schoenecker, K.A.

2003-01-01

Nitrogen (N) is an essential nutrient for plants and animals, and N may be limiting in many western US grassland and shrubland ungulate winter ranges. Ungulates may influence N pools and they may alter N inputs and outputs (losses) to the ecosystem in a number of ways. In this paper we compare the ecosystem effects of ungulate herbivory in two western national parks, Rocky Mountain National Park (RMNP), Colorado, and Yellowstone National Park (YNP), Wyoming. We compare ungulate herbivory effects on N pools, N fluxes, N yields, and plant productivity in the context of the accelerating and decelerating nutrient cycling scenarios [Ecology 79 (1998) 165]. We concluded that the YNP grasslands fit the accelerating nutrient cycling scenario for ungulate herbivory: in response to grazing, grassland plant species abundance was largely unaltered, net annual aboveground primary productivity (NAPP) was stimulated (except during drought), consumption of key N-rich forages by ungulates was moderate and their abundance was sustained, soil N mineralization rates doubled, N pools increased, aboveground N yield increased, and N concentrations increased in most grassland plant species. Grazing in grasslands in RMNP resulted in no consistent detectable acceleration or deceleration of nutrient cycling. Grazing effects in short willow and aspen vegetation types in RMNP fit the decelerating nutrient cycling scenario of Ritchie et al. [Ecology 79 (1998) 165]. Key N-rich forages declined due to herbivory (willows, aspen, herbaceous vegetation). Aboveground production declined, soil N mineralization rates declined, N pools declined (NO3− pools were 30% that of ungrazed controls), and aboveground N yield declined. We believe that the higher ungulate densities and rates of plant consumption in RMNP, large declines in N-rich forage plants, and possibly a tendency of ungulates to move N from willow and aspen vegetation types to other types in RMNP, contributed to deceleration of nutrient

Evaluating detection and monitoring tools for incipient and relictual non-native ungulate populations

USGS Publications Warehouse

Judge, Seth W.; Hess, Steve; Faford, Jonathan K.J.; Pacheco, Dexter; Leopold, Christina R.; Cole, Colleen; Deguzman, Veronica

2016-01-01

Hawai‘i Volcanoes National Park (HAVO) encompasses 1,308 km2 on Hawai‘i Island. The park harbors endemic plants and animals which are threatened by a variety of invasive species. Introduced ungulates have caused sharp declines of numerous endemic species and have converted ecosystems to novel grazing systems in many cases. Local ranchers and the Territorial Government of Hawai‘i had long conducted regional ungulate control even prior to the establishment of HAVO in 1916. In 1995 the park’s hunting team began a new hunt database that allowed managers to review hunt effort and effectiveness in each management unit. Target species included feral pigs (Sus scrofa), European mouflon sheep (Ovis gmelini musimon), feral goats (Capra hircus) and wild cattle (Bos taurus). Hunters removed 1,204 feral pigs from HAVO over a 19-year period (1996‒2014). A variety of methods were employed, but trapping, snaring and ground hunts with dogs accounted for the most kills. Trapping yielded the most animals per unit effort. Hunters and volunteers removed 6,657 mouflon from HAVO; 6,601 of those were from the 468 km2 Kahuku Unit. Aerial hunts yielded the most animals followed by ground hunt methods. Hunters completed eradications of goats in several management units over an 18- year period (1997‒2014) when they removed the last 239 known individuals in HAVO primarily with aerial hunts. There have also been seven cattle and five feral dogs (Canis familiaris) removed from HAVO. Establishing benchmarks and monitoring the success of on-the-ground ungulate removal efforts can improve the efficiency of protecting and restoring native forest for high-priority watersheds and native wildlife. We tested a variety of methods to detect small populations of ungulates within HAVO and the Hō‘ili Wai study area in the high-priority watershed of Ka‘ū Forest Reserve on Hawai‘i Island. We conducted ground surveys, aerial surveys and continuous camera trap monitoring in both fence

Large native ungulates

Treesearch

Bryce Rickel

2005-01-01

This chapter addresses the large native ungulates (American bison (Bos bison), elk (Cervus elaphus), white-tailed deer (Odocoileus virginianus), mule deer (Odocoileus hemionus), and pronghorn (Antilocapra americana) of the grasslands. The information presented includes...

Piroplasmosis in wildlife: Babesia and Theileria affecting free-ranging ungulates and carnivores in the Italian Alps.

PubMed

Zanet, Stefania; Trisciuoglio, Anna; Bottero, Elisa; de Mera, Isabel Garcia Fernández; Gortazar, Christian; Carpignano, Maria Grazia; Ferroglio, Ezio

2014-02-17

Piroplasmosis are among the most relevant diseases of domestic animals. Babesia is emerging as cause of tick-borne zoonosis worldwide and free-living animals are reservoir hosts of several zoonotic Babesia species. We investigated the epidemiology of Babesia spp. and Theileria spp. in wild ungulates and carnivores from Northern Italy to determine which of these apicomplexan species circulate in wildlife and their prevalence of infection. PCR amplification of the V4 hyper-variable region of the 18S rDNA of Babesia sp./Theileria sp was carried out on spleen samples of 1036 wild animals: Roe deer Capreolus capreolus (n = 462), Red deer Cervus elaphus (n = 52), Alpine Chamois Rupicapra rupicapra (n = 36), Fallow deer Dama dama (n = 17), Wild boar Sus scrofa (n = 257), Red fox Vulpes vulpes (n = 205) and Wolf Canis lupus (n = 7). Selected positive samples were sequenced to determine the species of amplified Babesia/Theileria DNA. Babesia/Theileria DNA was found with a mean prevalence of 9.94% (IC95% 8.27-11.91). The only piroplasms found in carnivores was Theileria annae, which was detected in two foxes (0.98%; IC95% 0.27-3.49). Red deer showed the highest prevalence of infection (44.23%; IC95% 31.6-57.66), followed by Alpine chamois (22.22%; IC95% 11.71-38.08), Roe deer (12.55%; IC95% 9.84-15.89), and Wild boar (4.67%; IC95% 2.69-7.98). Genetic analysis identified Babesia capreoli as the most prevalent piroplasmid found in Alpine chamois, Roe deer and Red deer, followed by Babesia bigemina (found in Roe deer, Red deer and Wild boar), and the zoonotic Babesia venatorum (formerly Babesia sp. EU1) isolated from 2 Roe deer. Piroplasmids of the genus Theileria were identified in Wild boar and Red deer. The present study offers novel insights into the role of wildlife in Babesia/Theileria epidemiology, as well as relevant information on genetic variability of piroplasmids infecting wild ungulates and carnivores.

Taeniid species of the Iberian wolf (Canis lupus signatus) in Portugal with special focus on Echinococcus spp.☆

PubMed Central

Guerra, Diogo; Armua-Fernandez, Maria Teresa; Silva, Marta; Bravo, Inês; Santos, Nuno; Deplazes, Peter; Carvalho, Luís Manuel Madeira de

2012-01-01

Taeniid species represent relevant pathogens in human and animals, circulating between carnivorous definitive hosts and a variety of mammalian intermediate hosts. In Portugal, however, little is known about their occurrence and life cycles, especially in wild hosts. An epidemiological survey was conducted to clarify the role of the Iberian wolf as a definitive host for taeniid species, including Echinococcus spp. Wolf fecal samples (n = 68) were collected from two regions in Northern Portugal. Taeniid eggs were isolated through a sieving-flotation technique, and species identification was performed using multiplex-PCR followed by sequencing of the amplicons. Taenia hydatigena (in 11.8% of the samples), Taenia serialis (5.9%), Taenia pisiformis (2.9%), Taenia polyacantha (1.5%) and Echinococcus intermedius (Echinococcus granulosus ‘pig strain’, G7) (1.5%) were detected. This is the first study to characterize the taeniid species infecting the Portuguese Iberian wolf, with the first records of T. polyacantha and E. intermedius in this species in the Iberian Peninsula. Iberian wolves can be regarded as relevant hosts for the maintenance of the wild and synanthropic cycles of taeniids in Portugal. PMID:24533315

Trophic cascades: linking ungulates to shrub-dependent birds and butterflies.

PubMed

J Teichman, Kristine; Nielsen, Scott E; Roland, Jens

2013-11-01

1. Studies demonstrating trophic cascades through the loss of top-down regulatory processes in productive and biologically diverse terrestrial ecosystems are limited. 2. Elk Island National Park, Alberta and surrounding protected areas have a wide range of ungulate density due to the functional loss of top predators, management for high ungulate numbers and variable hunting pressure. This provides an ideal setting for studying the effects of hyper-abundant ungulates on vegetation and shrub-dependent bird and butterfly species. 3. To examine the cascading effects of high ungulate density, we quantified vegetation characteristics and abundances of yellow warbler Dendroica petechia and Canadian tiger swallowtail Papilio canadensis under different ungulate density in and around Elk Island National Park. 4. Using Structural Equation Models we found that ungulate density was inversely related to shrub cover, whereas shrub cover was positively related to yellow warbler abundance. In addition, chokecherry Prunus virginiana abundance was inversely related to browse impact but positively related to P. canadensis abundance. 5. These results demonstrate a cascade resulting from hyper-abundant ungulates on yellow warblers and Canadian tiger swallowtails through reductions in shrub cover and larval host plant density. The combined effect of the functional loss of top predators and management strategies that maintain high ungulate numbers can decouple top-down regulation of productive temperate ecosystems. © 2013 The Authors. Journal of Animal Ecology © 2013 British Ecological Society.

New insights into the genetic composition and phylogenetic relationship of wolves and dogs in the Iberian Peninsula.

PubMed

Pires, Ana Elisabete; Amorim, Isabel R; Borges, Carla; Simões, Fernanda; Teixeira, Tatiana; Quaresma, Andreia; Petrucci-Fonseca, Francisco; Matos, José

2017-06-01

This study investigates the gene pool of Portuguese autochthonous dog breeds and their wild counterpart, the Iberian wolf subspecies ( Canis lupus signatus ), using standard molecular markers. A combination of paternal and maternal molecular markers was used to investigate the genetic composition, genetic differentiation and genetic relationship of native Portuguese dogs and the Iberian wolf. A total of 196 unrelated dogs, including breed and village dogs from Portugal, and other dogs from Spain and North Africa, and 56 Iberian wolves (wild and captive) were analyzed for nuclear markers, namely Y chromosome SNPs, Y chromosome STR loci, autosomal STR loci, and a mitochondrial fragment of the control region I. Our data reveal new variants for the molecular markers and confirm significant genetic differentiation between Iberian wolf and native domestic dogs from Portugal. Based on our sampling, no signs of recent introgression between the two subspecies were detected. Y chromosome data do not reveal genetic differentiation among the analyzed dog breeds, suggesting they share the same patrilineal origin. Moreover, the genetic distinctiveness of the Iberian wolf from other wolf populations is further confirmed with the description of new mtDNA variants for this endemism. Our research also discloses new molecular markers for wolf and dog subspecies assignment, which might become particularly relevant in the case of forensic or noninvasive genetic studies. The Iberian wolf represents a relic of the once widespread wolf population in Europe and our study reveals that it is a reservoir of unique genetic diversity of the grey wolf, Canis lupus . These results stress the need for conservation plans that will guarantee the sustainability of this threatened top predator in Iberia.

Ungulate herbivory alters leaf functional traits and recruitment of regenerating aspen.

PubMed

Rhodes, Aaron C; Anderson, Val; St Clair, Samuel B

2017-03-01

Herbivory by ungulates can affect forest regeneration success, but its long-term impacts on tree function and recruitment are less studied. We evaluated strategies of resistance, tolerance and vertical escape against ungulate herbivory by evaluating leaf traits (photosynthesis, morphology and chemistry) and growth rates of aspen in the presence and absence of ungulate herbivores 1, 2, 3 and 26 years after fires initiated aspen suckering. Over the initial 3-year period, ~60% of aspen stems in unfenced plots showed evidence of being browsed by ungulates. After 3 years, aspen in unfenced plots had smaller leaves, were 50% shorter, and had 33% lower nonstructural carbohydrate concentrations and 33% greater concentrations of condensed tannins, when compared with fenced aspen. Aspen exposed to ungulate herbivory over a 26-year period maintained smaller leaves, had lower annual radial growth rates and were still below the critical height threshold of 2 m required to escape ungulate herbivory for successful recruitment. In contrast, the average height of aspen protected from ungulates was approaching 6 m. Over the 26-year period leaves in unfenced plots had 41% lower nonstructural carbohydrate concentrations and greater expression of defense compounds-condensed tannins (63%) and phenolic glycosides (102%)-than leaves in fenced plots. Photosynthetic rates were slightly higher in aspen that experienced ungulate browsing, suggesting that changes in leaf anatomy and chemistry due to ungulate herbivory did not interfere with photosynthesis. Our data suggest that ungulate browsing increases investment in chemical defense, lowers nonstructural carbohydrate concentrations and reduces leaf area, which decreases the recruitment potential of regenerating aspen. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

The Punta Lucero Quarry site (Zierbena, Bizkaia): a window into the Middle Pleistocene in the Northern Iberian Peninsula

NASA Astrophysics Data System (ADS)

Gómez-Olivencia, Asier; Sala, Nohemi; Arceredillo, Diego; García, Nuria; Martínez-Pillado, Virginia; Rios-Garaizar, Joseba; Garate, Diego; Solar, Gonzalo; Libano, Iñaki

2015-08-01

The period between the end of the Early Pleistocene and the mid-Middle Pleistocene (roughly between 1.0 and 0.4 Ma BP) is of great interest in Western Europe. It witnessed several climatic oscillations and changes in the fauna, the demise of a hominin species and the appearance of another, along with important cultural and technological changes. Thus, the few available sites with these chronologies is vital to the understanding of the tempo and mode of these changes. Middle Pleistocene sites in the Northern Iberian Peninsula are very rare. Here we present the study of the site found at the Punta Lucero Quarry (Biscay province, Northern Iberian Peninsula), which includes for the first time the complete collection from the site. The fossil association from this site includes several ungulates, such as a Megacerine deer, Cervus elaphus, large bovids (likely both Bos primigenius and Bison sp. are present), Stephanorhinus sp., and carnivores, such as Homotherium latidens, Panthera gombaszoegensis, Canis mosbachensis and Vulpes sp. This association is typical of a middle Middle Pleistocene chronology and would be the oldest macro-mammal site in the Eastern Cantabrian region. This site would likely correspond to a chronology after Mode 1 technological complex and before the arrival of Mode 2 technology in this region. Thus, it offers a glimpse into the paleoecological conditions slightly prior to or contemporaneous with the first Acheulian makers in the northern fringe of the Iberian Peninsula.

Impact of wild prey availability on livestock predation by snow leopards

PubMed Central

Redpath, Stephen M.; Bhatnagar, Yash Veer; Ramakrishnan, Uma; Chaturvedi, Vaibhav; Smout, Sophie C.; Mishra, Charudutt

2017-01-01

An increasing proportion of the world's poor is rearing livestock today, and the global livestock population is growing. Livestock predation by large carnivores and their retaliatory killing is becoming an economic and conservation concern. A common recommendation for carnivore conservation and for reducing predation on livestock is to increase wild prey populations based on the assumption that the carnivores will consume this alternative food. Livestock predation, however, could either reduce or intensify with increases in wild prey depending on prey choice and trends in carnivore abundance. We show that the extent of livestock predation by the endangered snow leopard Panthera uncia intensifies with increases in the density of wild ungulate prey, and subsequently stabilizes. We found that snow leopard density, estimated at seven sites, was a positive linear function of the density of wild ungulates—the preferred prey—and showed no discernible relationship with livestock density. We also found that modelled livestock predation increased with livestock density. Our results suggest that snow leopard conservation would benefit from an increase in wild ungulates, but that would intensify the problem of livestock predation for pastoralists. The potential benefits of increased wild prey abundance in reducing livestock predation can be overwhelmed by a resultant increase in snow leopard populations. Snow leopard conservation efforts aimed at facilitating increases in wild prey must be accompanied by greater assistance for better livestock protection and offsetting the economic damage caused by carnivores. PMID:28680665

Prehistoric contacts over the Straits of Gibraltar indicated by genetic analysis of Iberian Bronze Age cattle

PubMed Central

Anderung, Cecilia; Bouwman, Abigail; Persson, Per; Carretero, José Miguel; Ortega, Ana Isabel; Elburg, Rengert; Smith, Colin; Arsuaga, Juan Luis; Ellegren, Hans; Götherström, Anders

2005-01-01

The geographic situation of the Iberian Peninsula makes it a natural link between Europe and North Africa. However, it is a matter of debate to what extent African influences via the Straits Gibraltar have affected Iberia's prehistoric development. Because early African pastoralist communities were dedicated to cattle breeding, a possible means to detect prehistoric African–Iberian contacts might be to analyze the origin of cattle breeds on the Iberian Peninsula. Some contemporary Iberian cattle breeds show a mtDNA haplotype, T1, that is characteristic to African breeds, generally explained as being the result of the Muslim expansion of the 8th century A.D., and of modern imports. To test a possible earlier African influence, we analyzed mtDNA of Bronze Age cattle from the Portalón cave at the Atapuerca site in northern Spain. Although the majority of samples showed the haplotype T3 that dominates among European breeds of today, the T1 haplotype was found in one specimen radiocarbon dated 1800 calibrated years B.C. Accepting T1 as being of African origin, this result indicates prehistoric African–Iberian contacts and lends support to archaeological finds linking early African and Iberian cultures. We also found a wild ox haplotype in the Iberian Bronze Age sample, reflecting local hybridization or backcrossing or that aurochs were hunted by these farming cultures. PMID:15941827

Piroplasmosis in wildlife: Babesia and Theileria affecting free-ranging ungulates and carnivores in the Italian Alps

PubMed Central

2014-01-01

Background Piroplasmosis are among the most relevant diseases of domestic animals. Babesia is emerging as cause of tick-borne zoonosis worldwide and free-living animals are reservoir hosts of several zoonotic Babesia species. We investigated the epidemiology of Babesia spp. and Theileria spp. in wild ungulates and carnivores from Northern Italy to determine which of these apicomplexan species circulate in wildlife and their prevalence of infection. Methods PCR amplification of the V4 hyper-variable region of the 18S rDNA of Babesia sp./Theileria sp was carried out on spleen samples of 1036 wild animals: Roe deer Capreolus capreolus (n = 462), Red deer Cervus elaphus (n = 52), Alpine Chamois Rupicapra rupicapra (n = 36), Fallow deer Dama dama (n = 17), Wild boar Sus scrofa (n = 257), Red fox Vulpes vulpes (n = 205) and Wolf Canis lupus (n = 7). Selected positive samples were sequenced to determine the species of amplified Babesia/Theileria DNA. Results Babesia/Theileria DNA was found with a mean prevalence of 9.94% (IC95% 8.27-11.91). The only piroplasms found in carnivores was Theileria annae, which was detected in two foxes (0.98%; IC95% 0.27-3.49). Red deer showed the highest prevalence of infection (44.23%; IC95% 31.6-57.66), followed by Alpine chamois (22.22%; IC95% 11.71-38.08), Roe deer (12.55%; IC95% 9.84-15.89), and Wild boar (4.67%; IC95% 2.69-7.98). Genetic analysis identified Babesia capreoli as the most prevalent piroplasmid found in Alpine chamois, Roe deer and Red deer, followed by Babesia bigemina (found in Roe deer, Red deer and Wild boar), and the zoonotic Babesia venatorum (formerly Babesia sp. EU1) isolated from 2 Roe deer. Piroplasmids of the genus Theileria were identified in Wild boar and Red deer. Conclusions The present study offers novel insights into the role of wildlife in Babesia/Theileria epidemiology, as well as relevant information on genetic variability of piroplasmids infecting wild ungulates and

A review of the relationships between visitors and ungulates in national parks

USGS Publications Warehouse

Wright, R. Gerald

1998-01-01

The growth in ungulate populations and the enhanced viewing opportunities they provide in many national parks, a mixed blessing to park managers, has been viewed positively by most park visitors. Visitors, long the major constituency of parks, have played a major role in the way ungulates are managed. I trace the history of the relationships between visitors and ungulates in parks and provide examples of how visitors have influenced ungulate management policies. Today, although public influence on ungulate management seems to be greater than ever, the public has a poor understanding of park management actions. Park interpretive programs can be used to address this problem.

Ungulate browsers promote herbaceous layer diversity in logged temperate forests

USGS Publications Warehouse

Faison, Edward K.; DeStefano, Stephen; Foster, David R.; Motzkin, Glenn; Rapp, Josh

2016-01-01

Ungulates are leading drivers of plant communities worldwide, with impacts linked to animal density, disturbance and vegetation structure, and site productivity. Many ecosystems have more than one ungulate species; however, few studies have specifically examined the combined effects of two or more species on plant communities. We examined the extent to which two ungulate browsers (moose [Alces americanus]) and white-tailed deer [Odocoileus virginianus]) have additive (compounding) or compensatory (opposing) effects on herbaceous layer composition and diversity, 5–6 years after timber harvest in Massachusetts, USA. We established three combinations of ungulates using two types of fenced exclosures – none (full exclosure), deer (partial exclosure), and deer + moose (control) in six replicated blocks. Species composition diverged among browser treatments, and changes were generally additive. Plant assemblages characteristic of closed canopy forests were less abundant and assemblages characteristic of open/disturbed habitats were more abundant in deer + moose plots compared with ungulate excluded areas. Browsing by deer + moose resulted in greater herbaceous species richness at the plot scale (169 m2) and greater woody species richness at the subplot scale (1 m2) than ungulate exclusion and deer alone. Browsing by deer + moose resulted in strong changes to the composition, structure, and diversity of forest herbaceous layers, relative to areas free of ungulates and areas browed by white-tailed deer alone. Our results provide evidence that moderate browsing in forest openings can promote both herbaceous and woody plant diversity. These results are consistent with the classic grazing-species richness curve, but have rarely been documented in forests.

Trichinella pseudospiralis in the Iberian peninsula.

PubMed

Zamora, M J; Alvarez, M; Olmedo, J; Blanco, M C; Pozio, E

2015-06-15

Nematode worms of the genus Trichinella are zoonotic parasites circulating in most continents, including Europe. In Spain, Trichinella spiralis and Trichinella britovi are highly prevalent in wildlife but seldom in domestic pigs. In Portugal, only T. britovi was documented in wild carnivores. In the period 2006-2013 in Spain, 384 (0.0001%) pigs and 1399 (0.20%) wild boars (Sus scrofa) were positive for Trichinella spp. larvae, which were identified as T. spiralis or T. britovi. In 2014, Trichinella pseudospiralis larvae were isolated from a wild boar hunted in the Gerona province, Cataluña region, North-East of Spain, near the border to France. This is the first report of T. pseudospiralis in the Iberian peninsula, which suggests a broad distribution area of this zoonotic nematode in Europe. Since larvae of this Trichinella species do not encapsulate in the host muscles, they can be detected only by artificial digestion of muscle samples. T. pseudospiralis is the only Trichinella species infecting both mammals and birds. Birds can spread this pathogen over great distances including islands triggering new foci of infections in areas previously considered at low risk for this pathogen. Copyright © 2015 Elsevier B.V. All rights reserved.

Surveillance of Viruses in Wild Fish Populations in Areas around the Gulf of Cadiz (South Atlantic Iberian Peninsula)

PubMed Central

Moreno, Patricia; Olveira, José G.; Labella, Alejandro; Cutrín, Juan Manuel; Baro, Jorge C.; Borrego, Juan Jose

2014-01-01

This report describes a viral epidemiological study of wild fish around the Gulf of Cadiz (southwestern Iberian Peninsula) and is focused on infectious pancreatic necrosis virus (IPNV), viral hemorrhagic septicemia virus (VHSV), and viral nervous necrosis virus (VNNV). One fish species (Chelon labrosus) was sampled inside the gulf, at the mouth of the San Pedro River. Another 29 were sampled, in three oceanographic campaigns, at sites around the Bay of Cadiz. The fish were processed individually and subjected to isolation in cell culture and molecular diagnosis. VHSV was not isolated from any species. Thirteen IPNV-type isolates were obtained from barracuda (Sphyraena sphyraena), axillary seabream (Pagellus acarne), common two-banded seabream (Diplodus vulgaris), common pandora (P. erythrinus), Senegal seabream (D. bellottii), and surmullet (Mullus surmuletus). Six VNNV isolates were obtained from axillary seabream, common pandora, black seabream (Spondyliosoma cantharus), red mullet (Mullet barbatus), Lusitanian toadfish (Halobatrachus didactylus), and tub gurnard (Chelidonichtys lucerna). In the river mouth, viruses were detected only after reamplification, obtaining prevalence percentages of IPNV and VNNV (44.4 and 63.0%, respectively) much higher than those observed in the oceanographic campaigns (25.7 and 19.6%, respectively). The opposite results were obtained in the case of VHSV after reamplification: 11.1% in the river mouth and 43.6% in the oceanic locations. Analyzing the results with respect to the proximity of the sampling sites to the coast, an anthropogenic influence on wild fish is suggested and discussed. The type of viruses and the presence of natural reassortants are also discussed. PMID:25128341

Are inland wolf-ungulate systems influenced by marine subsidies of Pacific salmon?

USGS Publications Warehouse

Adams, Layne G.; Farley, Sean D.; Stricker, Craig A.; Demma, Dominic J.; Roffler, Gretchen H.; Miller, Dennis C.; Rye, Robert O.

2010-01-01

Wolves (Canis lupus) in North America are considered obligate predators of ungulates with other food resources playing little role in wolf population dynamics or wolf–prey relations. However, spawning Pacific salmon (Oncorhyncus spp.) are common throughout wolf range in northwestern North America and may provide a marine subsidy affecting inland wolf–ungulate food webs far from the coast. We conducted stable‐isotope analyses for nitrogen and carbon to evaluate the contribution of salmon to diets of wolves in Denali National Park and Preserve, 1200 river‐km from tidewater in interior Alaska, USA. We analyzed bone collagen from 73 wolves equipped with radio collars during 1986–2002 and evaluated estimates of salmon in their diets relative to the availability of salmon and ungulates within their home ranges. We compared wolf densities and ungulate : wolf ratios among regions with differing salmon and ungulate availability to assess subsidizing effects of salmon on these wolf–ungulate systems. Wolves in the northwestern flats of the study area had access to spawning salmon but low ungulate availability and consumed more salmon (17% ± 7% [mean ± SD]) than in upland regions, where ungulates were sixfold more abundant and wolves did or did not have salmon spawning areas within their home ranges (8% ± 6% and 3% ± 3%, respectively). Wolves were only 17% less abundant on the northwestern flats compared to the remainder of the study area, even though ungulate densities were 78% lower. We estimated that biomass from fall runs of chum (O. keta) and coho (O. kisutch) salmon on the northwestern flats was comparable to the ungulate biomass there, and the contribution of salmon to wolf diets was similar to estimates reported for coastal wolves in southeast Alaska. Given the ubiquitous consumption of salmon by wolves on the northwestern flats and the abundance of salmon there, we conclude that wolf numbers in this region were enhanced by the allochthonous subsidy

Parasite species of the endangered Iberian wolf (Canis lupus signatus) and a sympatric widespread carnivore.

PubMed

Figueiredo, Ana; Oliveira, Lucia; Madeira de Carvalho, Luís; Fonseca, Carlos; Torres, Rita Tinoco

2016-08-01

Parasites have a profound impact on wildlife population dynamics. However, until some years ago, studies on the occurrence and prevalence of wildlife parasites were neglected comparatively with the studies on humans and domestic animals. In this study, we determined the parasite prevalence of two sympatric wild canids: the endangered Iberian wolf (Canis lupus signatus) and the widespread red fox (Vulpes vulpes), in central Portugal. From November 2014 to July 2015, fresh fecal samples from both species were collected monthly in several transects distributed throughout the study area. All samples were submitted to several coprological techniques. In total, 6 helminth parasites (Crenosoma vulpis, Angiostrongylus vasorum, Toxocara canis, Trichuris vulpis, Ancylostomatidae, Toxascaris leonina), and a protozoa (Balantidium coli) were identified based on size and morphology. The red fox was infected by seven different parasites while the Iberian wolf was infected by four. All parasites present in wolf were also present in the red fox. C. vulpis had the higher prevalence in red fox, while Ancylostomatidae were the most prevalent parasites in wolf. To our knowledge, this is the first study in this isolated subpopulation of the Iberian wolf. Our results show that both carnivores carry parasites that are of concern as they are pathogenic to humans and other wild and domestic animals. We suggest that surveillance programs must also include monitoring protocols of wildlife; particularly endangered species.

Evaluating prey switching in wolf-ungulate systems.

PubMed

Garrott, Robert A; Bruggeman, Jason E; Becker, Matthew S; Kalinowski, Steven T; White, P J

2007-09-01

Wolf restoration has become a widely accepted conservation and management practice throughout North America and Europe, though the ecosystem effects of returning top carnivores remain both scientific and societal controversies. Mathematical models predicting and describing wolf-ungulate interactions are typically limited to the wolves' primary prey, with the potential for prey switching in wolf-multiple-ungulate systems only suggested or assumed by a number of investigators. We used insights gained from experiments on small taxa and field data from ongoing wolf-ungulate studies to construct a model of predator diet composition for a wolf-elk-bison system in Yellowstone National Park, Wyoming, USA. The model explicitly incorporates differential vulnerability of the ungulate prey types to predation, predator preference, differences in prey biomass, and the possibility of prey switching. Our model demonstrates wolf diet shifts with changes in relative abundance of the two prey, with the dynamics of this shift dependent on the combined influences of preference, differential vulnerability, relative abundances of prey, and whether or not switching occurs. Differences in vulnerability between elk and bison, and strong wolf preference for elk, result in an abrupt dietary shift occurring only when elk are very rare relative to bison, whereas incorporating switching initiates the dietary shift more gradually and at higher bison-elk ratios. We demonstrate how researchers can apply these equations in newly restored wolf-two-prey systems to empirically evaluate whether prey switching is occurring. Each coefficient in the model has a biological interpretation, and most can be directly estimated from empirical data collected from field studies. Given the potential for switching to dramatically influence predator-prey dynamics and the wide range of expected prey types and abundances in some systems where wolves are present and/or being restored, we suggest that this is an

Do age-specific survival patterns of wild boar fit current evolutionary theories of senescence?

PubMed

Gamelon, Marlène; Focardi, Stefano; Gaillard, Jean-Michel; Gimenez, Olivier; Bonenfant, Christophe; Franzetti, Barbara; Choquet, Rémi; Ronchi, Francesca; Baubet, Eric; Lemaître, Jean-François

2014-12-01

Actuarial senescence is widespread in age-structured populations. In growing populations, the progressive decline of Hamiltonian forces of selection with age leads to decreasing survival. As actuarial senescence is overcompensated by a high fertility, actuarial senescence should be more intense in species with high reproductive effort, a theoretical prediction that has not been yet explicitly tested across species. Wild boar (Sus scrofa) females have an unusual life-history strategy among large mammals by associating both early and high reproductive effort with potentially long lifespan. Therefore, wild boar females should show stronger actuarial senescence than similar-sized related mammals. Moreover, being polygynous and much larger than females, males should display higher senescence rates than females. Using a long-term monitoring (18 years) of a wild boar population, we tested these predictions. We provided clear evidence of actuarial senescence in both sexes. Wild boar females had earlier but not stronger actuarial senescence than similar-sized ungulates. Both sexes displayed similar senescence rates. Our study indicates that the timing of senescence, not the rate, is associated with the magnitude of fertility in ungulates. This demonstrates the importance of including the timing of senescence in addition to its rate to understand variation in senescence patterns in wild populations. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Carriage of Staphylococcus aureus by free-living wild animals in Spain.

PubMed

Porrero, M Concepción; Mentaberre, Gregorio; Sánchez, Sergio; Fernández-Llario, Pedro; Casas-Díaz, Encarna; Mateos, Ana; Vidal, Dolors; Lavín, Santiago; Fernández-Garayzábal, José-Francisco; Domínguez, Lucas

2014-08-01

The presence of methicillin-susceptible Staphylococcus aureus (MSSA) was analyzed in different free-living wild animals to assess the genetic diversity and predominant genotypes on each animal species. Samples were taken from the skin and/or nares, and isolates were characterized by spa typing, multilocus sequence typing (MLST) and antimicrobial susceptibility testing. The proportion of MSSA carriers were 5.00, 22.93, 19.78, and 17.67% in Eurasian griffon vulture, Iberian ibex, red deer, and wild boar, respectively (P = 0.057). A higher proportion of isolates (P = 0.000) were recovered from nasal samples (78.51%) than skin samples (21.49%), but the 9.26% of red deer and 18.25% of wild boar would have been undetected if only nasal samples had been tested. Sixty-three different spa types were identified, including 25 new spa types. The most common were t528 (43.59%) in Iberian ibex, t548 and t11212 (15.79% and 14.04%) in red deer, and t3750 (36.11%) in wild boar. By MLST, 27 STs were detected, of which 12 had not been described previously. The most frequent were ST581 for Iberian ibex (48.72%), ST425 for red deer (29.82%), and ST2328 for wild boar (42.36%). Isolates from Eurasian griffon vulture belong to ST133. Host specificity has been observed for the most frequent spa types and STs (P = 0.000). The highest resistance percentage was found against benzylpenicillin (average, 22.2%), although most of the S. aureus isolates were susceptible to all antimicrobial tested. Basically, MSSA isolates were different from those MRSA isolates previously detected in the same animal species. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

Managers' summary - Ecological studies of the Pryor Mountain Wild Horse Range, 1992-1997

USGS Publications Warehouse

Singer, F.J.; Schoenecker, K.A.

2000-01-01

Ecological Studies of the Pryor Mountain Wild Horse Range, 1992-1997 provides a synthesis of key findings of landscape-scale, interdisciplinary studies of the effects of wild horses and native ungulates on a rugged, mountain ecosystem. This is perhaps the most comprehensive study of a wild horse herd conducted. This was a complex study and one involving a truly interagency approach. Six agencies either provided input to research priority setting, funding, or both. The agencies included the Bureau of Land Management, National Park Service, U.S. Geological Survey, Montana Department of Fish, Wildlife and Parks, Wyoming Game and Fish Department, and U.S. Forest Service. The major research direction and effort came from the U.S. Geological Survey and Natural Resources Ecology Lab, Colorado State University with Montana State University and the University of Kentucky also participating. Ungulate monitoring was conducted by the U.S. Geological Survey, Biological Resources Division, Bureau of Land Management, Billings Field Office and the Montana Fish and Wildlife Parks, with funding by Bighorn Canyon National Recreation Area. Many other individuals and groups were involved and deserve credit. The report printing was made possible with funds from the Bureau of Land Management, Wild Horse and Burro Program, Washington Office. This report was prepared by the Information Management Project, Midcontinent Ecological Science Center, U.S. Geological Survey.

Constant Hepatitis E Virus (HEV) Circulation in Wild Boar and Red Deer in Spain: An Increasing Concern Source of HEV Zoonotic Transmission.

PubMed

Kukielka, D; Rodriguez-Prieto, V; Vicente, J; Sánchez-Vizcaíno, J M

2016-10-01

Hepatitis E is a viral zoonosis that affects multiple hosts. The complete dynamics of infection in wildlife are still unknown, but the previous fact facilitates the maintenance and circulation of the virus, posing a risk to human health in the case of meat consumption from susceptible animals. In Spain, it has been shown how domestic pigs, cattle and wildlife (i.e. wild boar and red deer) clearly interact in hunting farms, generating a complex epidemiological situation in terms of interspecies pathogen transmission. Therefore, in this study, we aimed to (i) evaluate the circulation of the virus in geographically close domestic (Iberian pigs) and wild animals (wild boar and deer) living in hunting areas from central Spain over an 8-year period (2003-2010) and (ii) to determine whether HEV could be used as a marker of domestic-wildlife contact. For these purposes, a longitudinal analysis of Iberian pig, wild boar and red deer samples (n = 287) through virological and serological tests was conducted to shed light upon the circulation events of HEV. Regarding HEV RNA detection by real-time RT-PCR, 10.12% samples (95% CI: 5.44-14.8) from wild boar and 16.05% samples (95% CI: 8.06-24.04) from red deer were positive. As for the Iberian pigs, none of the 48 samples was positive for HEV RNA detection. In the serological analysis, 43.75% (95% CI: 29.75-57.75) from Iberian pig, 57.40% (95% CI: 48.10-66.70) from wild boar and 12.85% (95% CI: 5.01-20.69) samples from red deer presented anti-HEV antibodies. Positive samples were distributed among all study years (2003-2010). These results depict the urgent need to improve the inspection and surveillance of these species and their products. In the case of HEV, it is clear that the stable and constant presence of the virus in wildlife and its contact with Iberian pigs pose a risk for human health as they are all destined for human consumption. © 2015 Blackwell Verlag GmbH.

The genetics of the pre-Roman Iberian Peninsula: a mtDNA study of ancient Iberians.

PubMed

Sampietro, M L; Caramelli, D; Lao, O; Calafell, F; Comas, D; Lari, M; Agustí, B; Bertranpetit, J; Lalueza-Fox, C

2005-09-01

The Iberians developed a surprisingly sophisticated culture in the Mediterranean coast of the Iberian Peninsula from the 6th century BC until their conquest by the Romans in the 2nd century BC. They spoke and wrote a non-Indo-European language that still cannot be understood; their origins and relationships with other non-Indo-European peoples, like the Etruscans, are unclear, since their funerary practices were based on the cremation of bodies, and therefore anthropology has been unable to approach the study of this people. We have retrieved mitochondrial DNA (mtDNA) from a few of the scarce skeletal remains that have been preserved, some of them belonging to ritualistically executed individuals. The most stringent authentication criteria proposed for ancient DNA, such as independent replication, amino-acid analysis, quantitation of template molecules, multiple extractions and cloning of PCR products, have been followed to obtain reliable sequences from the mtDNA hypervariable region 1 (HVR1), as well as some haplogroup diagnostic SNPs. Phylogeographic analyses show that the haplogroup composition of the ancient Iberians was very similar to that found in modern Iberian Peninsula populations, suggesting a long-term genetic continuity since pre-Roman times. Nonetheless, there is less genetic diversity in the ancient Iberians than is found among modern populations, a fact that could reflect the small population size at the origin of the population sampled, and the heterogenic tribal structure of the Iberian society. Moreover, the Iberians were not especially closely related to the Etruscans, which points to considerable genetic heterogeneity in Pre-Roman Western Europe.

Literature Review and Annotated Bibliography: Water Requirements of Desert Ungulates

USGS Publications Warehouse

Cain, James W.; Krausman, Paul R.; Rosenstock, Steven S.; Turner, Jack C.

2005-01-01

Executive Summary Ungulates adapted to desert areas are able to survive extreme temperatures and limited water availability. This ability is largely due to behavioral, morphological, and physiological adaptations that allow these animals to avoid or tolerate extreme environmental conditions. The physiological adaptations possessed by ungulates for thermoregulation and maintenance of water balance have been the subject of numerous studies involving a wide range of species. In this report we review the behavioral, morphological, and physiological mechanisms used by ungulates and other desert mammals to maintain water and temperature balance in arid environments. We also review some of the more commonly used methods for studying the physiological mechanisms involved in water balance and thermoregulation, and the influence of dehydration on these mechanisms.

Whole-genome mapping reveals a large chromosomal inversion on Iberian Brucella suis biovar 2 strains.

PubMed

Ferreira, Ana Cristina; Dias, Ricardo; de Sá, Maria Inácia Corrêa; Tenreiro, Rogério

2016-08-30

Optical mapping is a technology able to quickly generate high resolution ordered whole-genome restriction maps of bacteria, being a proven approach to search for diversity among bacterial isolates. In this work, optical whole-genome maps were used to compare closely-related Brucella suis biovar 2 strains. This biovar is the unique isolated in domestic pigs and wild boars in Portugal and Spain and most of the strains share specific molecular characteristics establishing an Iberian clonal lineage that can be differentiated from another lineage mainly isolated in several Central European countries. We performed the BamHI whole-genome optical maps of five B. suis biovar 2 field strains, isolated from wild boars in Portugal and Spain (three from the Iberian lineage and two from the Central European one) as well as of the reference strain B. suis biovar 2 ATCC 23445 (Central European lineage, Denmark). Each strain showed a distinct, highly individual configuration of 228-231 BamHI fragments. Nevertheless, a low divergence was globally observed in chromosome II (1.6%) relatively to chromosome I (2.4%). Optical mapping also disclosed genomic events associated with B. suis strains in chromosome I, namely one indel (3.5kb) and one large inversion (944kb). By using targeted-PCR in a set of 176 B. suis strains, including all biovars and haplotypes, the indel was found to be specific of the reference strain ATCC 23445 and the large inversion was shown to be an exclusive genomic marker of the Iberian clonal lineage of biovar 2. Copyright © 2016 Elsevier B.V. All rights reserved.

Evolutionary history and molecular epidemiology of rabbit haemorrhagic disease virus in the Iberian Peninsula and Western Europe

PubMed Central

2010-01-01

Background Rabbit haemorrhagic disease virus (RHDV) is a highly virulent calicivirus, first described in domestic rabbits in China in 1984. RHDV appears to be a mutant form of a benign virus that existed in Europe long before the first outbreak. In the Iberian Peninsula, the first epidemic in 1988 severely reduced the populations of autochthonous European wild rabbit. To examine the evolutionary history of RHDV in the Iberian Peninsula, we collected virus samples from wild rabbits and sequenced a fragment of the capsid protein gene VP60. These data together with available sequences from other Western European countries, were analyzed following Bayesian Markov chain Monte Carlo methods to infer their phylogenetic relationships, evolutionary rates and demographic history. Results Evolutionary relationships of RHDV revealed three main lineages with significant phylogeographic structure. All lineages seem to have emerged at a common period of time, between ~1875 and ~1976. The Iberian Peninsula showed evidences of genetic isolation, probably due to geographic barriers to gene flow, and was also the region with the youngest MRCA. Overall, demographic analyses showed an initial increase and stabilization of the relative genetic diversity of RHDV, and a subsequent reduction in genetic diversity after the first epidemic breakout in 1984, which is compatible with a decline in effective population size. Conclusions Results were consistent with the hypothesis that the current Iberian RHDV arose from a single infection between 1869 and 1955 (95% HPD), and rendered a temporal pattern of appearance and extinction of lineages. We propose that the rising positive selection pressure observed throughout the history of RHDV is likely mediated by the host immune system as a consequence of the genetic changes that rendered the virus virulent. Consequently, this relationship is suggested to condition RHDV demographic history. PMID:21067589

Hidden MHC genetic diversity in the Iberian ibex (Capra pyrenaica).

PubMed

Angelone, Samer; Jowers, Michael J; Molinar Min, Anna Rita; Fandos, Paulino; Prieto, Paloma; Pasquetti, Mario; Cano-Manuel, Francisco Javier; Mentaberre, Gregorio; Olvera, Jorge Ramón López; Ráez-Bravo, Arián; Espinosa, José; Pérez, Jesús M; Soriguer, Ramón C; Rossi, Luca; Granados, José Enrique

2018-05-08

Defining hidden genetic diversity within species is of great significance when attempting to maintain the evolutionary potential of natural populations and conduct appropriate management. Our hypothesis is that isolated (and eventually small) wild animal populations hide unexpected genetic diversity due to their maintenance of ancient polymorphisms or introgressions. We tested this hypothesis using the Iberian ibex (Capra pyrenaica) as an example. Previous studies based on large sample sizes taken from its principal populations have revealed that the Iberian ibex has a remarkably small MHC DRB1 diversity (only six remnant alleles) as a result of recent population bottlenecks and a marked demographic decline that has led to the extinction of two recognized subspecies. Extending on the geographic range to include non-studied isolated Iberian ibex populations, we sequenced a new MHC DRB1 in what seemed three small isolated populations in Southern Spain (n = 132). The findings indicate a higher genetic diversity than previously reported in this important gene. The newly discovered allele, MHC DRB1*7, is identical to one reported in the domestic goat C. aegagrus hircus. Whether or not this is the result of ancient polymorphisms maintained by balancing selection or, alternatively, introgressions from domestic goats through hybridization needs to be clarified in future studies. However, hybridization between Iberian ibex and domestic goats has been reported in Spain and the fact that the newly discovered allele is only present in one of the small isolated populations and not in the others suggests introgression. The new discovered allele is not expected to increase fitness in C. pyrenaica since it generates the same protein as the existing MHC DRB1*6. Analysis of a microsatellite locus (OLADRB1) near the new MHC DRB1*7 gene reveals a linkage disequilibrium between these two loci. The allele OLADRB1, 187 bp in length, was unambiguously linked to the MHC DRB1*7 allele

Influence of nonnative and native ungulate biomass and seasonal precipitation on vegetation production in a Great Basin ecosystem

USGS Publications Warehouse

Zeigenfuss, Linda C.; Schoenecker, Kathryn A.; Ransom, Jason I.; Ignizio, Drew A.; Mask, Tracy

2014-01-01

The negative effects of equid grazers in semiarid ecosystems of the American West have been considered disproportionate to the influence of native ungulates in these systems because of equids' large body size, hoof shape, and short history on the landscape relative to native ungulates. Tools that can analyze the degree of influence of various ungulate herbivores in an ecosystem and separate effects of ungulates from effects of other variables (climate, anthropomorphic disturbances) can be useful to managers in determining the location of nonnative herbivore impacts and assessing the effect of management actions targeted at different ungulate populations. We used remotely sensed data to determine the influence of native and nonnative ungulates and climate on vegetation productivity at wildlife refuges in Oregon and Nevada. Our findings indicate that ungulate biomass density, particularly equid biomass density, and precipitation in winter and spring had the greatest influence on normalized difference vegetation index (NDVI) values. Our results concur with those of other researchers, who found that drought exacerbated the impacts of ungulate herbivores in arid systems.

Inferences about ungulate population dynamics derived from age ratios

USGS Publications Warehouse

Harris, N.C.; Kauffman, M.J.; Mills, L.S.

2008-01-01

Age ratios (e.g., calf:cow for elk and fawn:doe for deer) are used regularly to monitor ungulate populations. However, it remains unclear what inferences are appropriate from this index because multiple vital rate changes can influence the observed ratio. We used modeling based on elk (Cervus elaphus) life-history to evaluate both how age ratios are influenced by stage-specific fecundity and survival and how well age ratios track population dynamics. Although all vital rates have the potential to influence calf:adult female ratios (i.e., calf:xow ratios), calf survival explained the vast majority of variation in calf:adult female ratios due to its temporal variation compared to other vital rates. Calf:adult female ratios were positively correlated with population growth rate (??) and often successfully indicated population trajectories. However, calf:adult female ratios performed poorly at detecting imposed declines in calf survival, suggesting that only the most severe declines would be rapidly detected. Our analyses clarify that managers can use accurate, unbiased age ratios to monitor arguably the most important components contributing to sustainable ungulate populations, survival rate of young and ??. However, age ratios are not useful for detecting gradual declines in survival of young or making inferences about fecundity or adult survival in ungulate populations. Therefore, age ratios coupled with independent estimates of population growth or population size are necessary to monitor ungulate population demography and dynamics closely through time.

Managing multi-ungulate systems in disturbance-adapted forest ecosystems in North America

Treesearch

Martin Vavra; Robert A. Riggs

2010-01-01

Understanding how interactions among ungulate populations and their environmental dynamics play out across scales of time and space is a principal obstacle to managing ungulates in western North America. Morphological similarity, forage-base homogeneity and increasing animal density each enhance the likelihood of competitive interactions among sympatric populations....

Simulating ungulate herbivory across forest landscapes: A browsing extension for LANDIS-II

USGS Publications Warehouse

DeJager, Nathan R.; Drohan, Patrick J.; Miranda, Brian M.; Sturtevant, Brian R.; Stout, Susan L.; Royo, Alejandro; Gustafson, Eric J.; Romanski, Mark C.

2017-01-01

Browsing ungulates alter forest productivity and vegetation succession through selective foraging on species that often dominate early succession. However, the long-term and large-scale effects of browsing on forest succession are not possible to project without the use of simulation models. To explore the effects of ungulates on succession in a spatially explicit manner, we developed a Browse Extension that simulates the effects of browsing ungulates on the growth and survival of plant species cohorts within the LANDIS-II spatially dynamic forest landscape simulation model framework. We demonstrate the capabilities of the new extension and explore the spatial effects of ungulates on forest composition and dynamics using two case studies. The first case study examined the long-term effects of persistently high white-tailed deer browsing rates in the northern hardwood forests of the Allegheny National Forest, USA. In the second case study, we incorporated a dynamic ungulate population model to simulate interactions between the moose population and boreal forest landscape of Isle Royale National Park, USA. In both model applications, browsing reduced total aboveground live biomass and caused shifts in forest composition. Simulations that included effects of browsing resulted in successional patterns that were more similar to those observed in the study regions compared to simulations that did not incorporate browsing effects. Further, model estimates of moose population density and available forage biomass were similar to previously published field estimates at Isle Royale and in other moose-boreal forest systems. Our simulations suggest that neglecting effects of browsing when modeling forest succession in ecosystems known to be influenced by ungulates may result in flawed predictions of aboveground biomass and tree species composition.

Ungulate management in national parks of the United States and Canada

USGS Publications Warehouse

Demarais, S.; Cornicelli, L.; Kahn, R.; Merrill, E.; Miller, C.; Peek, J.M.; Porter, W.F.; Sargeant, G.A.

2012-01-01

Enabling legislation—that which gives appropriate officials the authority to implement or enforce the law—impacts management of ungulates in national parks of Canada and the United States (U.S.). The initial focus of such legislation in both countries centered on preserving natural and culturally significant areas for posterity. Although this objective remains primary, philosophies and practices have changed. A Canadian vision for ungulate management emerged during the latter half of the 20th century to protect and maintain or restore the ecological integrity of representative samples of the country’s 39 distinct landscapes, and to include provisions for traditional hunting and fishing practices representative of past cultural impacts on the environment. The current ungulate management approach in the U.S. relies on natural (ecological) processes, as long as normal conditions are promoted and there is no impairment of natural resources. Emphasizing natural processes as the basis has been a challenge because ecosystem dynamics are complex and management is multi-jurisdictional. Additionally, natural regulation typically will not prevent ungulates from reaching and sustaining densities that are incompatible with preservation or restoration of native flora and fauna, natural processes, or historical landscapes.

Linking landscape-scale differences in forage to ungulate nutritional ecology.

PubMed

Proffitt, Kelly M; Hebblewhite, Mark; Peters, Wibke; Hupp, Nicole; Shamhart, Julee

2016-10-01

Understanding how habitat and nutritional condition affect ungulate populations is necessary for informing management, particularly in areas experiencing carnivore recovery and declining ungulate population trends. Variations in forage species availability, plant phenological stage, and the abundance of forage make it challenging to understand landscape-level effects of nutrition on ungulates. We developed an integrated spatial modeling approach to estimate landscape-level elk (Cervus elaphus) nutritional resources in two adjacent study areas that differed in coarse measures of habitat quality and related the consequences of differences in nutritional resources to elk body condition and pregnancy rates. We found no support for differences in dry matter digestibility between plant samples or in phenological stage based on ground sampling plots in the two study areas. Our index of nutritional resources, measured as digestible forage biomass, varied among land cover types and between study areas. We found that altered plant composition following fires was the biggest driver of differences in nutritional resources, suggesting that maintaining a mosaic of fire history and distribution will likely benefit ungulate populations. Study area, lactation status, and year affected fall body fat of adult female elk. Elk in the study area exposed to lower summer range nutritional resources had lower nutritional condition entering winter. These differences in nutritional condition resulted in differences in pregnancy rate, with average pregnancy rates of 89% for elk exposed to higher nutritional resources and 72% for elk exposed to lower nutritional resources. Summer range nutritional resources have the potential to limit elk pregnancy rate and calf production, and these nutritional limitations may predispose elk to be more sensitive to the effects of harvest or predation. Wildlife managers should identify ungulate populations that are nutritionally limited and recognize that

Simulating ungulate herbivory across forest landscapes: A browsing extension for LANDIS-II

Treesearch

Nathan R. De Jager; Patrick J. Drohan; Brian M. Miranda; Brian R. Sturtevant; Susan L. Stout; Alejandro A. Royo; Eric J. Gustafson; Mark C. Romanski

2017-01-01

Browsing ungulates alter forest productivity and vegetation succession through selective foraging onspecies that often dominate early succession. However, the long-term and large-scale effects of browsing on forest succession are not possible to project without the use of simulation models. To explore the effects of ungulates on succession in a spatially explicit...

Gastrointestinal nematode infections in roe deer (Capreolus capreolus) from the NW of the Iberian Peninsula: assessment of some risk factors.

PubMed

Pato, F J; Vázquez, L; Díez-Baños, N; López, C; Sánchez-Andrade, R; Fernández, G; Díez-Baños, P; Panadero, R; Díaz, P; Morrondo, P

2013-09-01

Intestinal contents of 218 roe deer hunted in the northwest (NW) of the Iberian Peninsula during the 2008-2009 hunting seasons were examined in order to provide information on the gastrointestinal (GI) nematode prevalence and intensity of infection and the possible influence of some environmental and intrinsic factors such as climatic conditions, age and sex. All the animals studied harboured GI nematodes, and a total of 20 different species belonging to ten genera were identified. Spiculopteragia spiculoptera/Spiculopteragia mathevossiani, Ostertagia leptospicularis/Ostertagia kolchida and Nematodirus filicollis were the most common. This is the first citation for Chabertia ovina, Cooperia pectinata, Cooperia punctata, Cooperia oncophora, Haemonchus contortus, Nematodirus spathiger, Oesophagostomum venulosum, Teladorsagia trifurcata, Trichostrongylus capricola, Trichostrongylus colubriformis, Trichostrongylus vitrinus and Trichuris capreoli in roe deer from the Iberian Peninsula. Prevalence and intensity were significantly higher in the abomasum, where infections with more than one GI nematode species were the most common; in the other intestinal segments infections with only one GI nematode species were the most prevalent. When considering the influence of the different risk factors on the prevalence of GI nematodes, the highest prevalence for most of the genera were observed in roe deer from coastal areas, where climatic conditions are more favourable for the development and survival of third stage larvae in the environment. Regarding the sex of the animals, the prevalence was, in general, higher in males than in females, probably due to behavioural and physiological sex-related differences. On the contrary, no differences were found in relation to the age of the animals. This study reveals that roe deer from the NW of the Iberian Peninsula are widely and intensely infected with gastrointestinal nematodes, which probably affect the health status of these

Long-Term Changes in Game Species Over a Long Period of Transformation in the Iberian Mediterranean Landscape

NASA Astrophysics Data System (ADS)

Delibes-Mateos, Miguel; Farfán, Miguel Ángel; Olivero, Jesús; Márquez, Ana Luz; Vargas, Juan Mario

2009-06-01

Agricultural change has transformed large areas of traditional farming landscapes, leading to important changes in the species community assemblages in most European countries. We suspect that the drastic changes in land-use that have occurred in Andalusia (southern Spain) over recent decades, may have affected the distribution and abundance of game species in this region. This article compares the distribution of the main game species in Andalusia during the 1960s and 1990s, using data from maps available from the Mainland Spanish Fish, Game and National Parks Service and from recent datasets on hunting yield distributions, respectively. Big-game and small-game species were significantly segregated in southern Spain during the 1990s, as two clearly independent chorotypes (groups of species whose abundances are similarly distributed) were obtained from the classification analysis. In contrast, big-game and small-game species were not significantly segregated several decades ago, when there was only one chorotype consisting of small-game species and wild boar. The other three ungulates did not constitute a significant chorotype, as they showed positive correlations with some species in the group mentioned above. These changes seem to be a consequence of the transformations that have occurred in the Iberian Mediterranean landscape over the last few decades. The abandoning of traditional activities, and the consequent formation of dense scrubland and woodland, has led to an expansion of big-game species, and a decrease of small-game species in mountain areas. Moreover, agricultural intensification has apparently depleted small-game species populations in some agricultural areas. On the other hand, the increasingly intensive hunting management could be artificially boosting this segregation between small-game and big-game species. Our results suggest that the conservation and regeneration of traditional agricultural landscapes (like those predominating in the 1960s

Spring feeding on ungulate carcasses by grizzly bears in Yellowstone National Park

USGS Publications Warehouse

Green, Gerald I.; Mattson, D.J.; Peek, J.M.

1997-01-01

We studied the spring use of ungulate carcasses by grizzly bears (Ursus arctos horribilis) on ungulate winter ranges in Yellowstone National Park. We observed carcasses and bear tracks on survey routes that were travelled biweekly during spring of 1985-90 in the Firehole-Gibbon winter range and spring of 1987-90 in the Northern winter range. The probability that grizzly bears used a carcass was positively related to elevation and was lower within 400 m of a road, or within 5 km of a major recreational development compared to elsewhere. Carcass use peaked in April, coincident with peak ungulate deaths. Grizzly bears also were more likely to use carcasses in the Firehole-Gibbon compared to Northern Range study area. We attributed the effects of study area and elevation to the fact that grizzly bears den and are first active in the spring at high elevations and to differences in densities of competing scavengers. Probability of grizzly bear use was strongly related to body mass of carcasses on the Northern Range where densities of coyotes (Canis latrans) and black bears (U. americanus) appeared to be much higher than in the Firehole-Gibbon study area. We suggest that additional restrictions on human activity in ungulate winter ranges or movement of carcasses to remote areas could increase grizzly bear use of carrion. Fewer competing scavengers and greater numbers of adult ungulates vulnerable to winter mortality could have the same effect.

Molecular detection of tick-borne bacteria and protozoa in cervids and wild boars from Portugal.

PubMed

Pereira, André; Parreira, Ricardo; Nunes, Mónica; Casadinho, Afonso; Vieira, Maria Luísa; Campino, Lenea; Maia, Carla

2016-05-10

Wildlife can act as reservoir of different tick-borne pathogens, such as bacteria, parasites and viruses. The aim of the present study was to assess the presence of tick-borne bacteria and protozoa with veterinary and zoonotic importance in cervids and wild boars from the Centre and South of Portugal. One hundred and forty one blood samples from free-ranging ungulates including 73 red deer (Cervus elaphus), 65 wild boars (Sus scrofa) and three fallow deer (Dama dama) were tested for the presence of Anaplasma marginale/A. ovis, A. phagocytophilum, Anaplasma/Ehrlichia spp., Babesia/Theileria spp., Borrelia burgdorferi (sensu lato) (s.l.), and Rickettsia spp. DNA by PCR. Anaplasma spp. DNA was detected in 33 (43.4 %) cervids (31 red deer and two fallow deer) and in two (3.1 %) wild boars while Theileria spp. were found in 34 (44.7 %) cervids (32 red deer and two fallow deer) and in three (4.6 %) wild boar blood samples. Sequence analysis of msp4 sequences identified A. marginale, A. ovis, while the analysis of rDNA sequence data disclosed the presence of A. platys and A. phagocytophilum and T. capreoli and Theileria sp. OT3. Anaplasma spp./Theileria spp. mixed infections were found in 17 cervids (22.4 %) and in two wild boars (3.1 %). All samples were negative for Babesia sp., B. burgdorferi (s.l.), Ehrlichia sp. or Rickettsia sp. This is the first detection of Anaplasma marginale, A. ovis, A. phagocytophilum, A. platys, Theileria capreoli and Theileria sp. OT3 in cervids and wild boars from Portugal. Further studies concerning the potential pathogenicity of the different species of  Anaplasma and Theileria infecting wild ungulates, the identification of their vector range, and their putative infectivity to domestic livestock and humans should be undertaken.

Use of filter papers to determine seroprevalence of Toxoplasma gondii among hunted ungulates

USDA-ARS?s Scientific Manuscript database

Toxoplasmosis is a zoonosis caused by the protozoan Toxoplasma gondii, and it is found worldwide. To determine whether ungulates are reservoirs of T. gondii in an isolated and remote region of the northeastern Peruvian Amazon, antibodies to T. gondii were determined in 5 species of ungulates by the...

Effects of ungulate disturbance and weather variation on Pediocactus winkleri: insights from long-term monitoring

USGS Publications Warehouse

Clark, Deborah J.; Clark, Thomas O.; Duniway, Michael C.; Flagg, Cody B.

2015-01-01

Population dynamics and effects of large ungulate disturbances on Winkler cactus (Pediocactus winkleri K.D. Heil) were documented annually over a 20-year time span at one plot within Capitol Reef National Park, Utah. This cactus species was federally listed as threatened in 1998. The study began in 1995 to gain a better understanding of life history aspects and threats to this species. Data were collected annually in early spring and included diameter, condition, reproductive structures, mortality, recruitment, and disturbance by large ungulates. We used odds ratio and probability model analyses to determine effects of large ungulate trampling and weather on these cacti. During the study, plot population declined by 18%, with trampling of cactus, low precipitation, and cold spring temperatures implicated as causal factors. Precipitation and temperature affected flowering, mortality, and recruitment. Large ungulate disturbances increased mortality and reduced the probability of flowering. These results suggest that large ungulate disturbances and recent climate regimes have had an adverse impact on long-term persistence of this cactus.

Effects of ungulate management on vegetation at Hakalau Forest National Wildlife Refuge, Hawai'i Island

USGS Publications Warehouse

Hess, S.C.; Jeffrey, J.J.; Pratt, L.W.; Ball, D.L.

2010-01-01

We compiled and analysed data from 1987-2004 on vegetation monitoring during feral ungulate management at Hakalau Forest National Wildlife Refuge, a tropical montane rainforest on the island of Hawai'i All areas in the study had previously been used by ungulates, but cattle (Bos taurus) were removed and feral pig (Sus scrofa) populations were reduced during the study period. We monitored six line-intercept transects, three in previously high ungulate use areas and three in previously low ungulate use areas. We measured nine cover categories with the line-intercept method: native ferns; native woody plants; bryophytes; lichens; alien grasses; alien herbs; litter; exposed soil; and coarse woody debris. Vegetation surveys were repeated four times over a 16-year period. Vegetation monitoring revealed a strong increase in native fern cover and slight decreases in cover of bryophytes and exposed soil. Mean cover of native plants was generally higher in locations that were formerly lightly grazed, while alien grass and herb cover was generally higher in areas that were heavily grazed, although these effects were not statistically significant. These responses may represent early serai processes in forest regeneration following the reduction of feral ungulate populations. In contrast to many other Hawaiian forests which have become invaded by alien grasses and herbs after ungulate removal, HFNWR has not experienced this effect.

Geomorphology of the Iberian Continental Margin

NASA Astrophysics Data System (ADS)

Maestro, Adolfo; López-Martínez, Jerónimo; Llave, Estefanía; Bohoyo, Fernando; Acosta, Juan; Hernández-Molina, F. Javier; Muñoz, Araceli; Jané, Gloria

2013-08-01

The submarine features and processes around the Iberian Peninsula are the result of a complex and diverse geological and oceanographical setting. This paper presents an overview of the seafloor geomorphology of the Iberian Continental Margin and the adjacent abyssal plains. The study covers an area of approximately 2.3 million km2, including a 50 to 400 km wide band adjacent to the coastline. The main morphological characteristics of the seafloor features on the Iberian continental shelf, continental slope, continental rise and the surrounding abyssal plains are described. Individual seafloor features existing on the Iberian Margin have been classified into three main groups according to their origin: tectonic and/or volcanic, depositional and erosional. Major depositional and erosional features around the Iberian Margin developed in late Pleistocene-Holocene times and have been controlled by tectonic movements and eustatic fluctuations. The distribution of the geomorphological features is discussed in relation to their genetic processes and the evolution of the margin. The prevalence of one or several specific processes in certain areas reflects the dominant morphotectonic and oceanographic controlling factors. Sedimentary processes and the resulting depositional products are dominant on the Valencia-Catalán Margin and in the northern part of the Balearic Promontory. Strong tectonic control is observed in the geomorphology of the Betic and the Gulf of Cádiz margins. The role of bottom currents is especially evident throughout the Iberian Margin. The Galicia, Portuguese and Cantabrian margins show a predominance of erosional features and tectonically-controlled linear features related to faults.

Wild boar tuberculosis in Iberian Atlantic Spain: a different picture from Mediterranean habitats

PubMed Central

2013-01-01

Background Infections with Mycobacterium bovis and closely related members of the Mycobacterium tuberculosis complex (MTC) are shared between livestock, wildlife and sporadically human beings. Wildlife reservoirs exist worldwide and can interfere with bovine tuberculosis (TB) eradication efforts. The Eurasian wild boar (Sus scrofa) is a MTC maintenance host in Mediterranean Iberia (Spain and Portugal). However, few systematic studies in wild boar have been carried out in Atlantic regions. We describe the prevalence, distribution, pathology and epidemiology of MTC and other mycobacteria from wild boar in Atlantic Spain. A total of 2,067 wild boar were sampled between 2008 and 2012. Results The results provide insight into the current status of wild boar as MTC and Mycobacterium avium complex (MAC) hosts in temperate regions of continental Europe. The main findings were a low TB prevalence (2.6%), a low proportion of MTC infected wild boar displaying generalized TB lesions (16.7%), and a higher proportion of MAC infections (4.5%). Molecular typing revealed epidemiological links between wild boar and domestic – cattle, sheep and goat – and other wildlife – Eurasian badger (Meles meles) and red fox (Vulpes vulpes) – hosts. Conclusions This study shows that the likelihood of MTC excretion by wild boar in Atlantic habitats is much lower than in Mediterranean areas. However, wild boar provide a good indicator of MTC circulation and, given the current re-emergence of animal TB, similar large-scale surveys would be advisable in other Atlantic regions of continental Europe. PMID:24010539

Ancient DNA evidence of Iberian lynx palaeoendemism

NASA Astrophysics Data System (ADS)

Rodríguez-Varela, Ricardo; Tagliacozzo, Antonio; Ureña, Irene; García, Nuria; Crégut-Bonnoure, Evelyne; Mannino, Marcello A.; Arsuaga, Juan Luis; Valdiosera, Cristina

2015-03-01

The Iberian lynx, endemic to the Iberian Peninsula, is the most threatened carnivore in Europe and the most endangered felid in the world. Widely distributed throughout Iberia during the Pleistocene and Holocene it is now confined to two small populations in southern Spain. Lynx species differentiation, based solely on morphological analysis from skeletal traits, is a difficult task and can potentially lead to misidentification. In order to verify whether Iberian lynx had a wider geographical distribution in the past, we successfully sequenced 152 base pairs (bp) of the cytochrome b gene and 183 bp of the mitochondrial control region in 20 Late Pleistocene and Holocene fossil remains of Lynx sp. from southern Europe. Our results confirm the presence of Iberian lynx outside the Iberian Peninsula demonstrating that this is a palaeoendemic species that had a wider distribution range in southern Europe during the Holocene and the Late Pleistocene. In addition, we documented the presence of both Palaearctic extant lynx species in the Arene Candide (north Italy) site during the Last Glacial Maximum.

Wild Ungulates as Disseminators of Shiga Toxin-Producing Escherichia coli in Urban Areas

PubMed Central

Franklin, Alan B.; VerCauteren, Kurt C.; Maguire, Hugh; Cichon, Mary K.; Fischer, Justin W.; Lavelle, Michael J.; Powell, Amber; Root, J. Jeffrey; Scallan, Elaine

2013-01-01

Background In 2008, children playing on a soccer field in Colorado were sickened with a strain of Shiga toxin-producing Escherichia coli (STEC) O157:H7, which was ultimately linked to feces from wild Rocky Mountain elk. We addressed whether wild cervids were a potential source of STEC infections in humans and whether STEC was ubiquitous throughout wild cervid populations in Colorado. Methodology/Principal Findings We collected 483 fecal samples from Rocky Mountain elk and mule deer in urban and non-urban areas. Samples testing positive for STEC were higher in urban (11.0%) than non-urban (1.6%) areas. Elk fecal samples in urban areas had a much higher probability of containing STEC, which increased in both urban and non-urban areas as maximum daily temperature increased. Of the STEC-positive samples, 25% contained stx1 strains, 34.3% contained stx2, and 13% contained both stx1 and stx2. Additionally, eaeA genes were detected in 54.1% of the positive samples. Serotypes O103, and O146 were found in elk and deer feces, which also have the potential to cause human illness. Conclusions/Significance The high incidence of stx2 strains combined with eaeA and E-hyl genes that we found in wild cervid feces is associated with severe human disease, such as hemolytic uremic syndrome. This is of concern because there is a very close physical interface between elk and humans in urban areas that we sampled. In addition, we found a strong relationship between ambient temperature and incidence of STEC in elk feces, suggesting a higher incidence of STEC in elk feces in public areas on warmer days, which in turn may increase the likelihood that people will come in contact with infected feces. These concerns also have implications to other urban areas where high densities of coexisting wild cervids and humans interact on a regular basis. PMID:24349083

The Effect of Human Activities and Their Associated Noise on Ungulate Behavior

PubMed Central

Brown, Casey L.; Hardy, Amanda R.; Barber, Jesse R.; Fristrup, Kurt M.; Crooks, Kevin R.; Angeloni, Lisa M.

2012-01-01

Background The effect of anthropogenic noise on terrestrial wildlife is a relatively new area of study with broad ranging management implications. Noise has been identified as a disturbance that has the potential to induce behavioral responses in animals similar to those associated with predation risk. This study investigated potential impacts of a variety of human activities and their associated noise on the behavior of elk (Cervus elaphus) and pronghorn (Antilocapra americana) along a transportation corridor in Grand Teton National Park. Methodology/Principal Findings We conducted roadside scan surveys and focal observations of ungulate behavior while concurrently recording human activity and anthropogenic noise. Although we expected ungulates to be more responsive with greater human activity and noise, as predicted by the risk disturbance hypothesis, they were actually less responsive (less likely to perform vigilant, flight, traveling and defensive behaviors) with increasing levels of vehicle traffic, the human activity most closely associated with noise. Noise levels themselves had relatively little effect on ungulate behavior, although there was a weak negative relationship between noise and responsiveness in our scan samples. In contrast, ungulates did increase their responsiveness with other forms of anthropogenic disturbance; they reacted to the presence of pedestrians (in our scan samples) and to passing motorcycles (in our focal observations). Conclusions These findings suggest that ungulates did not consistently associate noise and human activity with an increase in predation risk or that they could not afford to maintain responsiveness to the most frequent human stimuli. Although reduced responsiveness to certain disturbances may allow for greater investment in fitness-enhancing activities, it may also decrease detections of predators and other environmental cues and increase conflict with humans. PMID:22808175

The effect of human activities and their associated noise on ungulate behavior.

PubMed

Brown, Casey L; Hardy, Amanda R; Barber, Jesse R; Fristrup, Kurt M; Crooks, Kevin R; Angeloni, Lisa M

2012-01-01

The effect of anthropogenic noise on terrestrial wildlife is a relatively new area of study with broad ranging management implications. Noise has been identified as a disturbance that has the potential to induce behavioral responses in animals similar to those associated with predation risk. This study investigated potential impacts of a variety of human activities and their associated noise on the behavior of elk (Cervus elaphus) and pronghorn (Antilocapra americana) along a transportation corridor in Grand Teton National Park. We conducted roadside scan surveys and focal observations of ungulate behavior while concurrently recording human activity and anthropogenic noise. Although we expected ungulates to be more responsive with greater human activity and noise, as predicted by the risk disturbance hypothesis, they were actually less responsive (less likely to perform vigilant, flight, traveling and defensive behaviors) with increasing levels of vehicle traffic, the human activity most closely associated with noise. Noise levels themselves had relatively little effect on ungulate behavior, although there was a weak negative relationship between noise and responsiveness in our scan samples. In contrast, ungulates did increase their responsiveness with other forms of anthropogenic disturbance; they reacted to the presence of pedestrians (in our scan samples) and to passing motorcycles (in our focal observations). These findings suggest that ungulates did not consistently associate noise and human activity with an increase in predation risk or that they could not afford to maintain responsiveness to the most frequent human stimuli. Although reduced responsiveness to certain disturbances may allow for greater investment in fitness-enhancing activities, it may also decrease detections of predators and other environmental cues and increase conflict with humans.

Ungulate exclusion, conifer thinning and mule deer forage in northeastern New Mexico

USGS Publications Warehouse

Kramer, David W.; Sorensen, Grant E.; Taylor, Chase A.; Cox, Robert D.; Gipson, Philip S.; Cain, James W.

2015-01-01

The southwestern United States has experienced expansion of conifer species (Juniperus spp. and Pinus ponderosa) into areas of semi-arid grassland over the past century. The expansion of conifers can limit palatable forage and reduce grass and forb communities. Conifer species are sometimes thinned through hydraulic mulching or selective cutting. We assessed the effects of these treatments on mule deer (Odocoileus hemionus) habitat in northeastern New Mexico to determine if conifer thinning improved cover of preferred forage species for mule deer in areas with and without ungulates. We measured plant cover and occurrence of preferred forage species in the summers of 2011 and 2012. An ongoing regional drought probably reduced vegetation response, with preferred forage species and herbaceous cover responding to conifer thinning or ungulate exclusion immediately following treatment, but not the following year. In 2011, areas that received thinning treatments had a higher abundance of preferred forage when compared to sites with no treatment. Grass coverage exhibited an immediate response in 2011, with ungulate exclosures containing 8% more coverage than areas without exclosures. The results suggest that conifer thinning and ungulate exclusion may elicit a positive response, however in the presence of drought; the positive effects are only short-term.

Do ungulates facilitate native and exotic plant spread? Seed dispersal by cattle, elk and deer in northeastern Oregon

Treesearch

Anne M. Bartuszevige; Bryan A. Endress

2008-01-01

Large domestic and native ungulates have the potential to disperse large quantities of seeds throughout the landscape. Many studies have found that ungulates are capable of dispersing seeds but few quantify the relative importance of ungulate dispersal across the landscape. We investigated the potential for cattle, elk, and deer to disperse native and exotic plants in...

PYCNOIB: Biodiversity and Biogeography of Iberian Pycnogonids

PubMed Central

Soler-Membrives, Anna; Munilla, Tomás

2015-01-01

Biodiversity and biogeographic studies comparing the distribution patterns of benthic marine organisms across the Iberian Atlantic and Mediterranean waters are scarce. The Pycnogonida (sea spiders) are a clear example of both endemicity and diversity, and are considered a key taxon to study and monitor biogeographic and biodiversity patterns. This is the first review that compiles data about abundance and diversity of Iberian pycnogonids and examines their biogeographic patterns and bathymetric constraints using GIS tools. A total of 17762 pycnogonid records from 343 localities were analyzed and were found to contain 65 species, 21 genera and 12 families. Achelia echinata and Ammothella longipes (family Acheliidae) were the most abundant comprising ~80% of the total records. The Acheliidae is also the most speciose in Iberian waters with 15 species. In contrast, the family Nymphonidae has 7 species but is significantly less abundant (<1% of the total records) than Acheliidae. Species accumulation curves indicate that further sampling would increase the number of Iberian species records. Current sampling effort suggests that the pycnogonid fauna of the Mediterranean region may be richer than that of the Atlantic. The Strait of Gibraltar and the Alboran Sea are recognized as species-rich areas that act as buffer zones between the Atlantic and Mediterranean boundaries. The deep waters surrounding the Iberian Peninsula are poorly surveyed, with only 15% of the sampling sites located below 1000 m. Further deep-water sampling is needed mainly on the Iberian Mediterranean side. PMID:25781483

Effects of Nonnative Ungulate Removal on Plant Communities and Soil Biogeochemistry in Tropical Forests

NASA Astrophysics Data System (ADS)

Cole, R. J.; Litton, C. M.; Giardina, C. P.; Sparks, J. P.

2014-12-01

Non-native ungulates have substantial impacts on native ecosystems globally, altering both plant communities and soil biogeochemistry. Across tropical and temperate ecosystems, land managers fence and remove non-native ungulates to conserve native biodiversity, a costly management action, yet long-term outcomes are not well quantified. Specifically, knowledge gaps include: (i) the magnitude and time frame of plant community recovery; (ii) the response of non-native invasive plants; and (iii) changes to soil biogeochemistry. In 2010, we established a series of paired ungulate presence vs. removal plots that span a 20 yr. chronosequence in tropical montane wet forests on the Island of Hawaii to quantify the impacts and temporal legacy of feral pig removal on plant communities and soil biogeochemistry. We also compared soil biogeochemistry in targeted areas of low and high feral pig impact. Our work shows that both native and non-native vegetation respond positively to release from top-down control following removal of feral pigs, but species of high conservation concern recover only if initially present at the time of non-native ungulate removal. Feral pig impacts on soil biogeochemistry appear to last for at least 20 years following ungulate removal. We observed that both soil physical and chemical properties changed with feral pig removal. Soil bulk density and volumetric water content decreased while extractable base cations and inorganic N increased in low vs. high feral pig impact areas. We hypothesize that altered soil biogeochemistry facilitates continued invasions by non-native plants, even decades after non-native ungulate removal. Future work will concentrate on comparisons between wet and dry forest ecosystems and test whether manipulation of soil nutrients can be used to favor native vs. non-native plant establishment.

Microsatellite variation in Donax trunculus from the Iberian Peninsula, with particular attention to Galician estuaries (NW Spain)

NASA Astrophysics Data System (ADS)

Nantón, A.; Arias-Pérez, A.; Freire, R.; Fernández-Pérez, J.; Nóvoa, S.; Méndez, J.

2017-10-01

Genetic variation and population structure information is essential for conservation and stock management policies. The wedge clam Donax trunculus is an important fishing resource in the Iberian Peninsula and in some areas, such as the northwestern Spain, wild stocks have decreased greatly. Despite this, information is mainly from the southwestern Atlantic to the northwestern Mediterranean of the Iberian Peninsula. In this study, fifteen microsatellite loci were examined at 17 localities along the Iberian Peninsula to characterize its genetic diversity and population structure. Particular attention was paid to the northwestern Atlantic area, and to test if the pattern previously described for this species is confirmed when localities distributed across the Atlantic coast are included and different microsatellite markers are used. All localities displayed similar allelic richness values and heterozygosity levels but when genetic diversity levels were compared among groups of localities, tests were significant and samples from the northwestern area (Galicia) showed the lowest values. The analysis of population structure indicated that localities from the Atlantic coast are genetically homogeneous although some samples showed significant pairwise Fst values. These values were low and Bayesian analysis of genetic differentiation did not show a consistent structure along the Atlantic coast of the Iberian Peninsula. However, Atlantic samples were genetically different from those located in Mediterranean coast, which may be explained by the existence of the Almeria-Oran front. Moreover, Fuengirola, locality situated in the Alboran Sea between the Strait of Gibraltar and Mediterranean Sea, showed significant differences from all remaining localities included in the study. Overall, the data showed the existence of genetic homogeneity along the Atlantic coast of the Iberian Peninsula and support the three management units (Atlantic Ocean, the Alboran Sea and the northwestern

Crustal parameters in the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Banda, E.

1988-06-01

The structure of the crust in the Iberian Peninsula has been investigated for the last 15 years by Spanish and Portuguese groups in close collaboration with other European institutions. The first experiments were carried out in Portugal (Mueller et al., 1973) with the aim of investigating the crustal structure of the Hercynian belt in the southwest corner of the Iberian peninsula. Other experiments have been subsequently realized to study different aspects of the crust in various regions of Portugal. In Spain the main effort has been focused in Alpine areas, with the first experiments in the Alboran Sea and the Betic Cordilleras (Working Group for Deep Seismic Sounding in Spain, 1974-1975, 1977; Working Group for Deep Seismic Sounding in the Alboran Sea, 1974-1975, 1978). Follow-up experiments until 1981 completed the work in the Betic Cordillera. Extensive experiments were carried out in the Pyrenees in 1978. Further surveys covered the Balearic Islands in 1976, the Valencia Trough in 1976 and 1983, and the Celtiberian Chain (or Iberic system) in 1981. The Hercynian belt has only been studied in detail in the northwest corner of Spain in 1982, with smaller studies in the central Iberian Massif in 1976 and 1986. Mostaanpour (1984) has compiled some crustal parameters (crustal thickness, average crustal velocity and Pn velocity) for western Europe. Meanwhile, more complete data are available for the Iberian Peninsula. The results presented here were derived from a large number of seismic refraction experiments which have been carried out mostly along or close to coastal areas of the Iberian Peninsula. Offshore explosions of various sizes were used as the energy source in most cases, in addition to some quarry blasts. Unfortunately this leaves most of the inner part of the Iberian Peninsula unsurveyed. Our purpose is to summarize some of the crustal parameters obtained so far and to detail the appropriate literature for the interested reader.

Ultrasonic monitoring of Iberian fat crystallization during cold storage

NASA Astrophysics Data System (ADS)

Corona, E.; García-Pérez, J. V.; Santacatalina, J. V.; Peña, R.; Benedito, J.

2012-12-01

The aim of this work was to evaluate the use of ultrasonic measurements to characterize the crystallization process and to assess the textural changes of Iberian fat and Iberian ham during cold storage. The ultrasonic velocity was measured in two types of Iberian fats (Montanera and Cebo) during cold storage (0, 2, 5, 7 and 10 °C) and in vacuum packaged Iberian ham stored at 6°C for 120 days. The fatty acid profile, thermal behaviour and textural properties of fat were determined. The ultrasonic velocity and textural measurements showed a two step increase during cold storage, which was related with the separate crystallization of two fractions of triglycerides. It was observed that the harder the fat, the higher the ultrasonic velocity. Likewise, Cebo fat resulted harder than Montanera due to a higher content of saturated triglycerides. The ultrasonic velocity in Iberian ham showed an average increase of 55 m/s after 120 days of cold storage due to fat crystallization. Thus, non-destructive ultrasonic technique could be a reliable method to follow the crystallization of fats and to monitor the changes in the textural properties of Iberian ham during cold storage.

Prevalence and phylogenetic analysis of hepatitis E virus in pigs, wild boars, roe deer, red deer and moose in Lithuania.

PubMed

Spancerniene, Ugne; Grigas, Juozas; Buitkuviene, Jurate; Zymantiene, Judita; Juozaitiene, Vida; Stankeviciute, Milda; Razukevicius, Dainius; Zienius, Dainius; Stankevicius, Arunas

2018-02-23

Hepatitis E virus (HEV) is one of the major causes of acute viral hepatitis worldwide. In Europe, food-borne zoonotic transmission of HEV genotype 3 has been associated with domestic pigs and wild boar. Controversial data are available on the circulation of the virus in animals that are used for human consumption, and to date, no gold standard has yet been defined for the diagnosis of HEV-associated hepatitis. To investigate the current HEV infection status in Lithuanian pigs and wild ungulates, the presence of viral RNA was analyzed by nested reverse transcription polymerase chain reaction (RT-nPCR) in randomly selected samples, and the viral RNA was subsequently genotyped. In total, 32.98 and 22.55% of the domestic pig samples were HEV-positive using RT-nPCR targeting the ORF1 and ORF2 fragments, respectively. Among ungulates, 25.94% of the wild boar samples, 22.58% of the roe deer samples, 6.67% of the red deer samples and 7.69% of the moose samples were positive for HEV RNA using primers targeting the ORF1 fragment. Using primers targeting the ORF2 fragment of the HEV genome, viral RNA was only detected in 17.03% of the wild boar samples and 12.90% of the roe deer samples. Phylogenetic analysis based on a 348-nucleotide-long region of the HEV ORF2 showed that all obtained sequences detected in Lithuanian domestic pigs and wildlife belonged to genotype 3. In this study, the sequences identified from pigs, wild boars and roe deer clustered within the 3i subtype reference sequences from the GenBank database. The sequences obtained from pig farms located in two different counties of Lithuania were of the HEV 3f subtype. The wild boar sequences clustered within subtypes 3i and 3h, clearly indicating that wild boars can harbor additional subtypes of HEV. For the first time, the ORF2 nucleotide sequences obtained from roe deer proved that HEV subtype 3i can be found in a novel host. The results of the viral prevalence and phylogenetic analyses clearly demonstrated

Functional response of ungulate browsers in disturbed eastern hemlock forests

USGS Publications Warehouse

DeStefano, Stephen

2015-01-01

Ungulate browsing in predator depleted North American landscapes is believed to be causing widespread tree recruitment failures. However, canopy disturbances and variations in ungulate densities are sources of heterogeneity that can buffer ecosystems against herbivory. Relatively little is known about the functional response (the rate of consumption in relation to food availability) of ungulates in eastern temperate forests, and therefore how “top down” control of vegetation may vary with disturbance type, intensity, and timing. This knowledge gap is relevant in the Northeastern United States today with the recent arrival of hemlock woolly adelgid (HWA; Adelges tsugae) that is killing eastern hemlocks (Tsuga canadensis) and initiating salvage logging as a management response. We used an existing experiment in central New England begun in 2005, which simulated severe adelgid infestation and intensive logging of intact hemlock forest, to examine the functional response of combined moose (Alces americanus) and white-tailed deer (Odocoileus virginianus) foraging in two different time periods after disturbance (3 and 7 years). We predicted that browsing impacts would be linear or accelerating (Type I or Type III response) in year 3 when regenerating stem densities were relatively low and decelerating (Type II response) in year 7 when stem densities increased. We sampled and compared woody regeneration and browsing among logged and simulated insect attack treatments and two intact controls (hemlock and hardwood forest) in 2008 and again in 2012. We then used AIC model selection to compare the three major functional response models (Types I, II, and III) of ungulate browsing in relation to forage density. We also examined relative use of the different stand types by comparing pellet group density and remote camera images. In 2008, total and proportional browse consumption increased with stem density, and peaked in logged plots, revealing a Type I response. In 2012

Decomposing risk: landscape structure and wolf behavior generate different predation patterns in two sympatric ungulates.

PubMed

Gervasi, Vincenzo; Sand, Hakan; Zimmermann, Barbara; Mattisson, Jenny; Wabakken, Petter; Linnell, John D C

2013-10-01

Recolonizing carnivores can have a large impact on the status of wild ungulates, which have often modified their behavior in the absence of predation. Therefore, understanding the dynamics of reestablished predator-prey systems is crucial to predict their potential ecosystem effects. We decomposed the spatial structure of predation by recolonizing wolves (Canis lupus) on two sympatric ungulates, moose (Alces alces) and roe deer (Capreolus capreolus), in Scandinavia during a 10-year study. We monitored 18 wolves with GPS collars, distributed over 12 territories, and collected records from predation events. By using conditional logistic regression, we assessed the contributions of three main factors, the utilization patterns of each wolf territory, the spatial distribution of both prey species, and fine-scale landscape structure, in determining the spatial structure of moose and roe deer predation risk. The reestablished predator-prey system showed a remarkable spatial variation in kill occurrence at the intra-territorial level, with kill probabilities varying by several orders of magnitude inside the same territory. Variation in predation risk was evident also when a spatially homogeneous probability for a wolf to encounter a prey was simulated. Even inside the same territory, with the same landscape structure, and when exposed to predation by the same wolves, the two prey species experienced an opposite spatial distribution of predation risk. In particular, increased predation risk for moose was associated with open areas, especially clearcuts and young forest stands, whereas risk was lowered for roe deer in the same habitat types. Thus, fine-scale landscape structure can generate contrasting predation risk patterns in sympatric ungulates, so that they can experience large differences in the spatial distribution of risk and refuge areas when exposed to predation by a recolonizing predator. Territories with an earlier recolonization were not associated with a lower

Epidemiological study of the intestinal helminths of wild boar (Sus scrofa) and mouflon (Ovis gmelini musimon) in central Italy.

PubMed

Magi, M; Bertani, M; Dell'Omodarme, M; Prati, M C

2002-12-01

Since 1995 the population of wild ungulates increased significantly in the "Parco provinciale dei Monti Livornesi" (Livorno, Tuscany, Central Italy). We studied the intestinal macroparasites of two hosts, the wild boar (Sus scrofa) and the mouflon (Ovis gmelini musimon). In the case of wild boars we found a dominant parasite species, Globocephalus urosubulatus. For this parasite the frequency distribution of the number of parasites per host agrees with a negative binomial distribution. There is not a significant correlation between the age of the animals and the parasitosis. Furthermore the mean parasite burden of male and female wild boars does not differ significantly. In the case of mouflons we found a dominant parasite species Nematodirus filicollis with Trichuris ovis as codominant species.

Low habitat overlap at landscape scale between wild camelids and feral donkeys in the Chilean desert

NASA Astrophysics Data System (ADS)

Malo, Juan E.; González, Benito A.; Mata, Cristina; Vielma, André; Donoso, Denise S.; Fuentes, Nicolás; Estades, Cristián F.

2016-01-01

Feral domestic ungulates may compete with the populations of wild herbivores with which they coexist, particularly so in arid regions. The potential competition between wild camelids and feral donkeys at the eastern sector of the Atacama Desert is evaluated in terms of their coincidence or segregation in habitat use and complemented with a comparison of reproductive output (yearling/adult ratio) of vicuña family groups in the proximity vs. distant from donkey observations. Habitat use of wild camelids and donkeys was sampled driving some 1250 km of roads and tracks at the dry and wet seasons. There were 221 vicuñas (Vicugna vicugna) sightings, 77 for donkeys (Equus asinus), 25 for guanacos (Lama guanicoe) and 8 for hybrids between guanacos and domestic llamas (Lama glama), as well as 174 randomly selected control locations. By means of Generalised Discriminant Analysis and Analysis of Variance we show that all ungulates actively select their habitat, with significant differences between use and availability in the area. Donkeys are relatively abundant in comparison with camelids and coincide broadly with both of them across the altitudinal gradient, but they fall between them in local scale habitat selection and do not seem to force their displacement from their preferred habitats. Thus donkeys occur preferentially on slopes with a high cover of tall shrubs, whereas vicuñas use valley bottoms with grass and guanacos the upper slope zones with grass. The potential for competition between donkeys and wild camelids is thus limited and it does not affect the reproductive output of vicuña in this region. Therefore, with the present knowledge we suggest that population control is not currently merited for feral donkeys.

Drought variability and change across the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Coll, Joan Ramon; Aguilar, Enric

2015-04-01

Drought variability and change is assessed in this study across the Iberian Peninsula along the 20th century and the first decade of the 21st century using state of the art drought indices: the Sc-PDSI, the SPI and the SPEI. Daily temperature and precipitation data from 24 time-series regularly spread over Iberian Peninsula are quality controlled and also homogenized in a monthly scale to create the Monthly Iberian Temperature and Precipitation Series (MITPS) for the period 1906-2010. The Sc-PDSI, the 12-month SPI and 12-month SPEI are computed on a monthly basis using the newly MITPS dataset to identify dry and wet conditions across time. Precipitation data is only required to compute SPI, but potential evapotranspiration (PET) is also needed to perform the Sc-PDSI and SPEI, which is estimated using the Tornthwaite's method. The analysis conducted in this study confirms that drought conditions are worsening for most of the Iberian Peninsula across time strongly induced by global warming especially during the last three decades. All drought indices have found a drying trend in the Pyrenees, Ebro basin, central Iberia and in the south and south-eastern area while a wetting trend is identified in the western and in the north-western region. Future projections also indicate a clear increase in hydrological drought conditions along the 21st century, thus, water saving and the application of effective water management strategies will be crucial to minimize the impact of hydrological droughts over the Iberian Peninsula into the near future. KEY WORDS: Drought, climate change, Iberian Peninsula, drought indices.

Drought variability and change across the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Coll, J. R.; Aguilar, E.; Ashcroft, L.

2017-11-01

Drought variability and change was assessed across the Iberian Peninsula over more than 100 years expanding through the twentieth century and the first decade of the twenty-first century. Daily temperature and precipitation data from 24 Iberian time series were quality controlled and homogenized to create the Monthly Iberian Temperature and Precipitation Series (MITPS) for the period 1906-2010. The Standardized Precipitation Index (SPI), driven only by precipitation, and the Standardized Precipitation Evapotranspiration Index (SPEI), based on the difference between the precipitation and the reference evapotranspiration (ET0), were computed at annual and seasonal scale to describe the evolution of droughts across time. The results confirmed that a clear temperature increase has occurred over the entire Iberian Peninsula at the annual and seasonal scale, but no significant changes in precipitation accumulated amounts were found. Similar drought variability was provided by the SPI and SPEI, although the SPEI showed greater drought severity and larger surface area affected by drought than SPI from 1980s to 2010 due to the increase in atmospheric evaporative demand caused by increased temperatures. Moreover, a clear drying trend was found by the SPEI for most of the Iberian Peninsula at annual scale and also for spring and summer, although the SPI did not experience significant changes in drought conditions. From the drying trend identified for most of the Iberian Peninsula along the twentieth century, an increase in drought conditions can also be expected for this region in the twenty-first century according to future climate change projections and scenarios.

Epizoochorous dispersal by ungulates depends on fur, grooming and social interactions.

PubMed

Liehrmann, Océane; Jégoux, Flore; Guilbert, Marie-Alice; Isselin-Nondedeu, Francis; Saïd, Sonia; Locatelli, Yann; Baltzinger, Christophe

2018-02-01

The transport phase of the animal-mediated plant dispersal process is critical to dispersal effectiveness as it determines the spatial distribution of the diaspores released and their chance for further recruitment. Assessing this specific phase of the dispersal process generally requires combining diaspore retention times with the associated distances covered. Here, we specifically tested the effect of grooming behavior, interindividual contacts and ungulate fur on diaspore retention times and associated dispersal distances for the hooked diaspores of Xanthium strumarium L. experimentally attached to tamed individuals of three ungulate species. We used a comparative approach based on differing fur quality on different body zones of these three ungulates. During 6-hr sessions, we monitored for grooming and social interactions that may induce intended or inadvertent diaspore detachment. Additionally, we proposed innovative approaches to directly assessing diaspore dispersal distances by red deer in situ. Fat-tailed functions fitted diaspore retention time, highlighting the potential for long-distance dispersal events. The longer the hair, the higher the retention capacity of diaspores in the animal's fur. As predicted, donkey retained diaspores longer than red deer and dwarf goat; and we also confirmed that diaspores attached to the short hair of the head fell off more quickly than did those on the other body zones. Dwarf goat groomed more often than both red deer and donkey, but also when it carried diaspores. Up to 14% of the diaspores detached from animal fur after specific grooming behavior. We observed, in controlled conditions, for the first time and for each ungulate species, interindividual transfers of diaspores, representing 5% of the diaspores attached to animals' fur. Our results militate for incorporating animal behavior into plant dispersal modeling approaches.

Changes of population trends and mortality patterns in response to the reintroduction of large predators: The case study of African ungulates

NASA Astrophysics Data System (ADS)

Grange, Sophie; Owen-Smith, Norman; Gaillard, Jean-Michel; Druce, Dave J.; Moleón, Marcos; Mgobozi, Mandisa

2012-07-01

Large predators have been reintroduced to an increasing number of protected areas in South Africa. However, the conditions allowing both prey and predator populations to be sustained in enclosed areas are still unclear as there is a lack of understanding of the consequences of such reintroductions for ungulate population dynamics. Variation in lion numbers, two decades after their first release, offered a special opportunity to test the effects of predation pressure on the population dynamics of seven ungulate species in the 960 km2 Hluhluwe-iMfolozi Park (HiP), South Africa. We used two different approaches to examine predator-prey relationships: the population response of ungulates to predation pressure after accounting for possible confounding factors, and the pattern of ungulate adult mortality observed from carcass records. Rainfall patterns affected observed mortalities of several ungulate species in HiP. Although lion predation accounted for most ungulate mortality, it still had no detectable influence on ungulate population trends and mortality patterns, with one possible exception. This evidence suggests that the lion population had not yet attained the maximum abundance potentially supported by their ungulate prey; but following recent increases in lion numbers it will probably occur soon. It remains uncertain whether a quasi-stable balance will be reached between prey and predator populations, or whether favoured prey species will be depressed towards levels potentially generating oscillatory dynamics in this complex large mammal assemblage. We specifically recommend a continuous monitoring of predator and prey populations in HiP since lions are likely to show more impacts on their prey species in the next years.

Ungulate browsing maintains shrub diversity in the absence of episodic disturbance in seasonally-arid conifer forest

Treesearch

Burak K. Pekin; Michael J. Wisdom; Bryan A. Endress; Bridgett J. Naylor; Catherine G. Parks

2014-01-01

Ungulates exert a strong influence on the composition and diversity of vegetation communities. However, little is known about how ungulate browsing pressure interacts with episodic disturbances such as fire and stand thinning. We assessed shrub responses to variable browsing pressure by cattle and elk in fuels treated (mechanical removal of fuels followed by prescribed...

Passive restoration following ungulate removal in a highly disturbed tropical wet forest devoid of native seed dispersers

USGS Publications Warehouse

Nafus, Melia; Savidge, Julie A.; Yackel Adams, Amy A.; Christy, Michelle T.; Reed, Robert

2018-01-01

Overabundant ungulate populations can alter forests. Concurrently, global declines of seed dispersers may threaten native forest structure and function. On an island largely devoid of native vertebrate seed dispersers, we monitored forest succession for 7 years following ungulate exclusion from a 5-ha area and adjacent plots with ungulates still present. We observed succession from open scrub to forest and understory cover by non-native plants declined. Two trees, native Hibiscus tiliaceus and non-native Leucaena leucocephala, accounted for most forest regeneration, with the latter dominant. Neither species is dependent on animal dispersers nor was there strong evidence that plants dependent on dispersers migrated into the 5-ha study area. Passive restoration following ungulate removal may facilitate restoration, but did not show promise for fully restoring native forest on Guam. Restoration of native forest plants in bird depopulated areas will likely require active outplanting of native seedlings, control of factors resulting in bird loss, and reintroduction of seed dispersers.

The shape of contention: adaptation, history, and contingency in ungulate mandibles.

PubMed

Raia, Pasquale; Carotenuto, Francesco; Meloro, Carlo; Piras, Paolo; Pushkina, Diana

2010-05-01

Mandibles and teeth of ungulates have been extensively studied to discern the functional significance of their design. Grazing ungulates have deeper mandibles, longer coronoid processes, flatter incisor arcades, and more hypsodont molars in comparison to browsers. If the functional significance of both mandible and teeth shapes is well-established, it remains uncertain to what extent mandible shapes are really adapted to grazing, meaning that they evolved either to serve their current biological function or just as a structural requirement to accommodate higher crowned molars. Here, we address this question by studying the contribution of phylogeny, hypsodonty, and body size to mandibular shape variation. The mandible shape appeared to be significantly influenced by hypsodonty but not by body size. Interestingly, hypsodonty-related changes influenced the tooth row in artiodactyls and perissodactyls significantly but in the opposite directions, which is ultimately related to their different digestive strategies. Yet, we obtained a strong phylogenetic effect in perissodactyls, suggesting that their mandible shape should be strongly inherited. The strength of this effect was not significant within artiodactyls (where hypsodonty explained much more variance in mandible shape). Digestive strategy is deemed to interplay with hypsodonty to produce different paths of adaptation to particular diets in ungulates.

Lack of evidence of spill-over of Salmonella enterica between cattle and sympatric Iberian ibex (Capra pyrenaica) from a protected area in Catalonia, NE Spain.

PubMed

Navarro-Gonzalez, N; Velarde, R; Porrero, M C; Mentaberre, G; Serrano, E; Mateos, A; Domínguez, L; Lavín, S

2014-08-01

Salmonella enterica is a zoonotic agent of worldwide importance found in a wide range of wild hosts. However, its prevalence in many popular game species has never been assessed. Iberian ibex (Capra pyrenaica) is the main game caprinae of the Iberian Peninsula and around two thousand individuals are hunted every year for trophy or for home consumption. In this work, 313 Iberian ibexes from the Ports de Tortosa i Beseit National Game Reserve (NE Spain) were tested for Salmonella enterica in faeces, and anti microbial susceptibility was determined. The exact location of shooting or capture was recorded with a GPS device to study the links of Salmonella infection with cattle presence and human proximity. Additionally, samples were taken from cattle grazing inside this reserve (n = 73). Only three Iberian ibexes (0.96%, 95% CI 0.2-2.8) were positive to Salmonella (serotype Enteritidis, Bardo and 35:r:z35), while prevalence was moderate in cattle: 21.92% (95% CI 13.10-33.14, serotype Meleagridis, Anatum, Kedougou and Othmarschen). All isolates were susceptible to the anti microbial agents tested. Moreover, a case of fatal septicaemic salmonellosis in an 11-year-old male Iberian ibex is described where Salmonella enterica serotype Enteritidis was isolated from the lung, liver and spleen samples. The low prevalence of Salmonella in Iberian ibex and the lack of shared serotypes suggest no association to cattle. Despite this, game meat aimed for human consumption should be examined, and it is strongly recommended that hunters and game keepers manipulate animals and carcasses under maximal hygienic conditions to avoid environmental contamination and human contagion. © 2012 Blackwell Verlag GmbH.

Lion, ungulate, and visitor reactions to playbacks of lion roars at Zoo Atlanta.

PubMed

Kelling, Angela S; Allard, Stephanie M; Kelling, Nicholas J; Sandhaus, Estelle A; Maple, Terry L

2012-01-01

Felids in captivity are often inactive and elusive in zoos, leading to a frustrating visitor experience. Eight roars were recorded from an adult male lion and played back over speakers as auditory enrichment to benefit the lions while simultaneously enhancing the zoo visitor experience. In addition, ungulates in an adjacent exhibit were observed to ensure that the novel location and increased frequency of roars did not lead to a stress or fear response. The male lion in this study roared more in the playback phase than in the baseline phases while not increasing any behaviors that would indicate compromised welfare. In addition, zoo visitors remained at the lion exhibit longer during playback. The nearby ungulates never exhibited any reactions stronger than orienting to playbacks, identical to their reactions to live roars. Therefore, naturalistic playbacks of lion roars are a potential form of auditory enrichment that leads to more instances of live lion roars and enhances the visitor experience without increasing the stress levels of nearby ungulates or the lion themselves, who might interpret the roar as that of an intruder.

Limited sharing of tick-borne hemoparasites between sympatric wild and domestic ungulates.

PubMed

Ghai, Ria R; Mutinda, Mathew; Ezenwa, Vanessa O

2016-08-15

Tick-borne hemoparasites (TBHs) are a group of pathogens of concern in animal management because they are associated with a diversity of hosts, including both wild and domestic species. However, little is known about how frequently TBHs are shared across the wildlife-livestock interface in natural settings. Here, we compared the TBHs of wild Grant's gazelle (Nanger granti) and domestic sheep (Ovis aries) in a region of Kenya where these species extensively overlap. Blood samples collected from each species were screened for piroplasm and rickettsial TBHs by PCR-based amplification of 18S/16S ribosomal DNA, respectively. Overall, 99% of gazelle and 66% of sheep were positive for Babesia/Theileria, and 32% of gazelle and 47% sheep were positive for Anaplasma/Ehrlichia. Sequencing a subset of positive samples revealed infections of Theileria and Anaplasma. Sequences sorted into seven phylogenetically distinct genotypes-two Theileria, and five Anaplasma. With the exception of a putatively novel Anaplasma lineage from Grant's gazelle, these genotypes appeared to be divergent forms of previously described species, including T. ovis, A. ovis, A. bovis, and A. platys. Only one genotype, which clustered within the A. platys clade, contained sequences from both gazelle and sheep. This suggests that despite niche, habitat, and phylogenetic overlap, the majority of circulating tick-borne diseases may not be shared between these two focal species. Copyright © 2016 Elsevier B.V. All rights reserved.

Theorizing Iberian Studies

ERIC Educational Resources Information Center

Newcomb, Robert Patrick

2015-01-01

A growing number of scholars invested in Iberian Studies are asking how peninsular literary and cultural studies might be reimagined, and reinvigorated, by placing the Spanish and Portuguese canons into critical dialogue with each other, and with Galician, Catalan, Basque/Euskadi, and Latin American and North African immigrant writers, cultural…

Aspen height, stem-girth and survivorship in an area of high ungulate use

USGS Publications Warehouse

Keigley, R.B.; Frisina, M.R.

2008-01-01

An increase in ungulate population size potentially exposes aspen suckers, saplings, and trees to increased use. This study examined how stem height and girth influenced the selection of stems by ungulates for browsing, rubbing, and gnawing, and reconstructed the history of ungulate use for the study area. Transects were run through each of three aspen clones growing in southwestern Montana to determine height, circumference, and the surface area from which bark was totally and partially removed by rubbing and gnawing. Stems 20-250 cm tall were browsed. Stems 2-13 cm diameter were preferentially selected for rubbing and gnawing. The area of totally removed bark on dead saplings was twice the area of removed bark on live stems of similar diameter, suggesting that bark removal played a major role in the death of some stems. Based on an analysis of stem height and age, ungulate browsing was inferred to have increased from a light-to-moderate level to an intense level in 1991. The depth of scars was used to date scarring events. An increase in rubbing and gnawing was determined to have occurred about 1985. We concluded that elk were primarily responsible for the observed impacts. The combined effect of rubbing, gnawing, and browsing affects a broader span of ages compared to the effect of browsing alone. If prescribed fire is used to rejuvenate aspen stands, the resulting young stems should be protected from heavy browsing, rubbing and gnawing until they reach about 13 cm diameter and have grown out of the browse zone.

Vegetation and non-native ungulate monitoring at the Big Island National Wildlife Refuge Complex 2010–2014.

USGS Publications Warehouse

Hess, Steven C.; Leopold, Christina R.; Kendall, Steven J.

2015-01-01

The Hakalau Forest Unit (HFU) of Big Island National Wildlife Refuge Complex (BINWRC) has intensively managed feral cattle (Bos taurus) and pigs (Sus scrofa) and monitored non-native ungulate presence and distribution during surveys of all managed areas since 1988. We: 1) provide results from recent ungulate surveys at HFU to determine current feral pig abundance and distribution; 2) present results of surveys of ungulate presence and distribution at the Kona Forest Unit (KFU); 3) present results of surveys of weed presence and cover at both refuge units; and 4) present baseline results from long-term vegetation monitoring plots at KFU. Overall pig abundance appears to have decreased at HFU, although not significantly, over the period from 2010 to 2014. Management units 2 and 4 contained the majority of pigs at HFU. Pig density outside of adjacent managed areas has declined significantly from 2010 to 2014 for unknown reasons. Ungulate sign occurred in > 50% of plots at KFU during the November 2012 and September 2013 surveys, but ungulate sign occurred in < 28% of plots during three other surveys. The ability to differentiate sign of ungulate species remains problematic at KFU. Changes in weed cover do not yet demonstrate any strong temporal pattern. Spatial patterns are more pronounced; however, some weed species may not be reliably represented due to observers’ abilities to recognize less common weeds. Nonetheless, the distribution and cover of fireweed (Senecio madagascariensis) at KFU may have increased over the study period. Vegetation surveys documented baseline floristic composition and forest structure at KFU. It is not known if this current amount of emerging cover is sufficient for long-term self-sustaining forest canopy regeneration; however, numerous ‘ōhi‘a seedlings were found in the wet forest and mesic ‘ōhi‘a habitats, indicating an ample viable seed source and robust potential for forest regeneration.

Evolution of toll-like receptors in the context of terrestrial ungulates and cetaceans diversification.

PubMed

Ishengoma, Edson; Agaba, Morris

2017-02-16

Toll-like receptors (TLRs) are the frontline actors in the innate immune response to various pathogens and are expected to be targets of natural selection in species adapted to habitats with contrasting pathogen burdens. The recent publication of genome sequences of giraffe and okapi together afforded the opportunity to examine the evolution of selected TLRs in broad range of terrestrial ungulates and cetaceans during their complex habitat diversification. Through direct sequence comparisons and standard evolutionary approaches, the extent of nucleotide and protein sequence diversity in seven Toll-like receptors (TLR2, TLR3, TLR4, TLR5, TLR7, TLR9 and TLR10) between giraffe and closely related species was determined. In addition, comparison of the patterning of key TLR motifs and domains between giraffe and related species was performed. The quantification of selection pressure and divergence on TLRs among terrestrial ungulates and cetaceans was also performed. Sequence analysis shows that giraffe has 94-99% nucleotide identity with okapi and cattle for all TLRs analyzed. Variations in the number of Leucine-rich repeats were observed in some of TLRs between giraffe, okapi and cattle. Patterning of key TLR domains did not reveal any significant differences in the domain architecture among giraffe, okapi and cattle. Molecular evolutionary analysis for selection pressure identifies positive selection on key sites for all TLRs examined suggesting that pervasive evolutionary pressure has taken place during the evolution of terrestrial ungulates and cetaceans. Analysis of positively selected sites showed some site to be part of Leucine-rich motifs suggesting functional relevance in species-specific recognition of pathogen associated molecular patterns. Notably, clade analysis reveals significant selection divergence between terrestrial ungulates and cetaceans in viral sensing TLR3. Mapping of giraffe TLR3 key substitutions to the structure of the receptor indicates that

Hepatozoon apri n. sp. (Adeleorina: Hepatozoidae) from the Japanese wild boar Sus scrofa leucomystax (Mammalia: Cetartiodactyla).

PubMed

Yamamoto, Mizuki; Tokiwa, Toshihiro; Tobiume, Miki; Akamatsu, Shigeru; Matsuo, Kayoko; Moribe, Junji; Ike, Kazunori

2017-12-01

Hepatozoon apri n. sp. is described from Japanese wild boars Sus scrofa leucomystax in Japan. The gamonts in the peripheral blood leukocytes were 11.6 ± 1.4 × 6.7 ± 1.3 μm in size. The meronts in the muscle tissues were 35.0-47.5 μm in length and 26.5-30 μm in width. A high rate (53.0%) of infection was found by nested PCR using muscle specimens from 181 wild boars captured in Tokushima, Japan. A phylogenetic analysis based on 18S rRNA gene sequences revealed that H. apri n. sp. detected in wild boars is closely related to Hepatozoon spp. isolated from carnivores. This is the first description of a species belonging to the genus Hepatozoon detected in ungulates.

Sagebrush-ungulate relationships on the Northern Yellowstone Winter Range

Treesearch

Carl L. Wambolt

2005-01-01

Sagebrush (Artemisia) taxa have historically been the landscape dominants over much of the Northern Yellowstone Winter Range (NYWR). Their importance to the unnaturally large ungulate populations on the NYWR throughout the twentieth century has been recognized since the 1920s. Sagebrush-herbivore ecology has been the focus of research on the NYWR for...

Dietary Plasticity of Generalist and Specialist Ungulates in the Namibian Desert: A Stable Isotopes Approach

PubMed Central

Lehmann, David; Mfune, John Kazgeba Elijah; Gewers, Erick; Cloete, Johann; Brain, Conrad; Voigt, Christian Claus

2013-01-01

Desert ungulates live in adverse ecosystems that are particularly sensitive to degradation and global climate change. Here, we asked how two ungulate species with contrasting feeding habits, grazing gemsbok (Oryx g. gazella) and browsing springbok (Antidorcas marsupialis), respond to an increase in food availability during a pronounced rain period. We used a stable isotope approach to delineate the feeding habits of these two ungulates in the arid Kunene Region of Namibia. Our nineteen months field investigation included two time periods of drought when food availability for ungulates was lowest and an intermediate period with extreme, unusual rainfalls. We documented thirteen isotopically distinct food sources in the isotopic space of the study area. Our results indicated a relatively high dietary plasticity of gemsbok, which fed on a mixture of plants, including more than 30% of C3 plants during drought periods, but almost exclusively on C4 and CAM plant types when food was plentiful. During drought periods, the inferred gemsbok diets also consisted of up to 25% of Euphorbia damarana; an endemic CAM plant that is rich in toxic secondary plant compounds. In contrast, springbok were generalists, feeding on a higher proportion of C3 than C4/CAM plants, irrespective of environmental conditions. Our results illustrate two dietary strategies in gemsbok and springbok which enable them to survive and coexist in the hostile Kunene arid ecosystem. PMID:23977249

Dietary plasticity of generalist and specialist ungulates in the Namibian Desert: a stable isotopes approach.

PubMed

Lehmann, David; Mfune, John Kazgeba Elijah; Gewers, Erick; Cloete, Johann; Brain, Conrad; Voigt, Christian Claus

2013-01-01

Desert ungulates live in adverse ecosystems that are particularly sensitive to degradation and global climate change. Here, we asked how two ungulate species with contrasting feeding habits, grazing gemsbok (Oryx g. gazella) and browsing springbok (Antidorcas marsupialis), respond to an increase in food availability during a pronounced rain period. We used a stable isotope approach to delineate the feeding habits of these two ungulates in the arid Kunene Region of Namibia. Our nineteen months field investigation included two time periods of drought when food availability for ungulates was lowest and an intermediate period with extreme, unusual rainfalls. We documented thirteen isotopically distinct food sources in the isotopic space of the study area. Our results indicated a relatively high dietary plasticity of gemsbok, which fed on a mixture of plants, including more than 30% of C3 plants during drought periods, but almost exclusively on C4 and CAM plant types when food was plentiful. During drought periods, the inferred gemsbok diets also consisted of up to 25% of Euphorbia damarana; an endemic CAM plant that is rich in toxic secondary plant compounds. In contrast, springbok were generalists, feeding on a higher proportion of C3 than C4/CAM plants, irrespective of environmental conditions. Our results illustrate two dietary strategies in gemsbok and springbok which enable them to survive and coexist in the hostile Kunene arid ecosystem.

Immunogenetic and population genetic analyses of Iberian cattle.

PubMed

Kidd, K K; Stone, W H; Crimella, C; Carenzi, C; Casati, M; Rognoni, G

1980-01-01

Blood samples were collected from more than 100 animals in each of 2 Spanish cattle breeds (Retinto and De Lidia), 2 Portuguese breeds (Alentejana and Mertolenga), and American Longhorn cattle. All samples for the 4 Iberian breeds were tested for 20 polymorphic systems; American Longhorn were tested for 19 of the 20. For each breed an average inbreeding coefficient was estimated by a comparison of the observed and expected heterozygosity at 7 or 8 codominant systems tested. All breeds had positive values but only 3 breeds had estimates of inbreeding that were statistically significantly different from 0: De Lidia with f = 0.17, Retinto with f = 0.08 and Mertolenga with f = 0.05. The De Lidia breed especially may be suffering from inbreeding depression since this high value is greater than expected if all of the animals were progeny of half-sib matings. Genetic distances were calculated from the gene frequency data on these 5 breeds plus 9 other European breeds. Analyses of these distances show a closely related group of the 4 Iberian breeds and American Longhorn, confirming the close relationships among the Iberian breeds and the Iberian, probably Portuguese, origin of American Longhorn cattle.

Adapted conservation measures are required to save the Iberian lynx in a changing climate

NASA Astrophysics Data System (ADS)

Fordham, D. A.; Akçakaya, H. R.; Brook, B. W.; Rodríguez, A.; Alves, P. C.; Civantos, E.; Triviño, M.; Watts, M. J.; Araújo, M. B.

2013-10-01

The Iberian lynx (Lynx pardinus) has suffered severe population declines in the twentieth century and is now on the brink of extinction. Climate change could further threaten the survival of the species, but its forecast effects are being neglected in recovery plans. Quantitative estimates of extinction risk under climate change have so far mostly relied on inferences from correlative projections of species' habitat shifts. Here we use ecological niche models coupled to metapopulation simulations with source-sink dynamics to directly investigate the combined effects of climate change, prey availability and management intervention on the persistence of the Iberian lynx. Our approach is unique in that it explicitly models dynamic bi-trophic species interactions in a climate change setting. We show that anticipated climate change will rapidly and severely decrease lynx abundance and probably lead to its extinction in the wild within 50 years, even with strong global efforts to mitigate greenhouse gas emissions. In stark contrast, we also show that a carefully planned reintroduction programme, accounting for the effects of climate change, prey abundance and habitat connectivity, could avert extinction of the lynx this century. Our results demonstrate, for the first time, why considering prey availability, climate change and their interaction in models is important when designing policies to prevent future biodiversity loss.

Genome sequences of wild and domestic bactrian camels

PubMed Central

Jirimutu; Wang, Zhen; Ding, Guohui; Chen, Gangliang; Sun, Yamin; Sun, Zhihong; Zhang, Heping; Wang, Lei; Hasi, Surong; Zhang, Yan; Li, Jianmei; Shi, Yixiang; Xu, Ze; He, Chuan; Yu, Siriguleng; Li, Shengdi; Zhang, Wenbin; Batmunkh, Mijiddorj; Ts, Batsukh; Narenbatu; Unierhu; Bat-Ireedui, Shirzana; Gao, Hongwei; Baysgalan, Banzragch; Li, Qing; Jia, Zhiling; Turigenbayila; Subudenggerile; Narenmanduhu; Wang, Zhaoxia; Wang, Juan; Pan, Lei; Chen, Yongcan; Ganerdene, Yaichil; Dabxilt; Erdemt; Altansha; Altansukh; Liu, Tuya; Cao, Minhui; Aruuntsever; Bayart; Hosblig; He, Fei; Zha-ti, A; Zheng, Guangyong; Qiu, Feng; Sun, Zikui; Zhao, Lele; Zhao, Wenjing; Liu, Baohong; Li, Chao; Chen, Yunqin; Tang, Xiaoyan; Guo, Chunyan; Liu, Wei; Ming, Liang; Temuulen; Cui, Aiying; Li, Yi; Gao, Junhui; Li, Jing; Wurentaodi; Niu, Shen; Sun, Tao; Zhai, Zhengxiao; Zhang, Min; Chen, Chen; Baldan, Tunteg; Bayaer, Tuman; Li, Yixue; Meng, He

2012-01-01

Bactrian camels serve as an important means of transportation in the cold desert regions of China and Mongolia. Here we present a 2.01 Gb draft genome sequence from both a wild and a domestic bactrian camel. We estimate the camel genome to be 2.38 Gb, containing 20,821 protein-coding genes. Our phylogenomics analysis reveals that camels shared common ancestors with other even-toed ungulates about 55–60 million years ago. Rapidly evolving genes in the camel lineage are significantly enriched in metabolic pathways, and these changes may underlie the insulin resistance typically observed in these animals. We estimate the genome-wide heterozygosity rates in both wild and domestic camels to be 1.0 × 10−3. However, genomic regions with significantly lower heterozygosity are found in the domestic camel, and olfactory receptors are enriched in these regions. Our comparative genomics analyses may also shed light on the genetic basis of the camel's remarkable salt tolerance and unusual immune system. PMID:23149746

A tool for determining duration of mortality events in archaeological assemblages using extant ungulate microwear

PubMed Central

Rivals, Florent; Prignano, Luce; Semprebon, Gina M.; Lozano, Sergi

2015-01-01

The seasonality of human occupations in archaeological sites is highly significant for the study of hominin behavioural ecology, in particular the hunting strategies for their main prey-ungulates. We propose a new tool to quantify such seasonality from tooth microwear patterns in a dataset of ten large samples of extant ungulates resulting from well-known mass mortality events. The tool is based on the combination of two measures of variability of scratch density, namely standard deviation and coefficient of variation. The integration of these two measurements of variability permits the classification of each case into one of the following three categories: (1) short events, (2) long-continued event and (3) two separated short events. The tool is tested on a selection of eleven fossil samples from five Palaeolithic localities in Western Europe which show a consistent classification in the three categories. The tool proposed here opens new doors to investigate seasonal patterns of ungulate accumulations in archaeological sites using non-destructive sampling. PMID:26616864

The use of radio-collars for monitoring wildlife diseases: a case study from Iberian ibex affected by Sarcoptes scabiei in Sierra Nevada, Spain

PubMed Central

2013-01-01

estimated the average time for Iberian ibex recovering from mange infection and the average survival time of the non-resistant ones. We expect wider use of radio-collars for wild animals diseases monitoring, affected/not-affected animals interaction, and treatment efficacy, among others. PMID:23965311

Characterization of the Iberian Y chromosome haplogroup R-DF27 in Northern Spain.

PubMed

Villaescusa, Patricia; Illescas, María José; Valverde, Laura; Baeta, Miriam; Nuñez, Carolina; Martínez-Jarreta, Begoña; Zarrabeitia, Maria Teresa; Calafell, Francesc; de Pancorbo, Marian M

2017-03-01

The European paternal lineage R-DF27 has been proposed as a haplogroup of Iberian origin due to its maximum frequencies in the Iberian Peninsula. In this study, the distribution and structure of DF27 were characterized in 591 unrelated male individuals from four key populations of the north area of the Iberian Peninsula through the analysis of 12 Y-SNPs that define DF27 main sublineages. Additionally, Y-SNP allele frequencies were also gathered from the reference populations in the 1000 Genomes Project to compare and obtain a better landscape of the distribution of DF27. Our results reveal frequencies over 35% of DF27 haplogroup in the four North Iberian populations analyzed and high frequencies for its subhaplogroups. Considering the low frequency of DF27 and its sublineages in most populations outside of the Iberian Peninsula, this haplogroup seems to have geographical significance; thus, indicating a possible Iberian patrilineal origin of vestiges bearing this haplogroup. The dataset presented here contributes with new data to better understand the complex genetic variability of the Y chromosome in the Iberian Peninsula, that can be applied in Forensic Genetics. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Seroprevalence of Toxoplasma gondii in Iberian pig sows.

PubMed

Pablos-Tanarro, Alba; Ortega-Mora, Luis Miguel; Palomo, Antonio; Casasola, Francisco; Ferre, Ignacio

2018-05-01

The objective of the present study was to investigate the seroprevalence of Toxoplasma gondii infection in Iberian sows reared in extensive and intensive management conditions and to compare two serologic techniques used for diagnosis. In addition, some possible risk factors associated with the presence of serum antibodies to T. gondii were also studied. Serum samples were collected from 2492 Iberian sows on 14 pig farms. Three types of management systems were included, traditional extensive outdoor farms (five farms), intensive farms with outdoor access (n = 4), and conventional intensive indoor farms (n = 5). The presence of serum antibodies to T. gondii was evaluated by two commercially available tests: an indirect enzyme-linked immunosorbent assay (ELISA) and a direct agglutination test (DAT). Serum antibodies against T. gondii were detected in 237 sows (9.5%) by at least one of the techniques used. The mean seroprevalence of toxoplasmosis in Iberian sows was 5.8% by ELISA and 8.9% by DAT. An agreement kappa-value of 0.68 (95%, CI = 0.63-0.74) was found between both tests. The results from this study suggest that the prevalence of T. gondii antibodies among Iberian sows seems to be moderate-low. The presence of serum antibodies against T. gondii in Iberian sows was associated to an extensive management system and low-level facilities of the farm, sow number (> 1000 animals), presence of cats, absence of rodent control and bird-proof nets in windows, well-water source, feed sources and storage (from the same farm and not stored in silo), absence of fences, and low farm worker qualification.

Dynamics and life histories of northern ungulates in changing environments

NASA Astrophysics Data System (ADS)

Hendrichsen, D. K.

2011-12-01

Regional climate and local weather conditions can profoundly influence life history parameters (growth, survival, fecundity) and population dynamics in northern ungulates (Post and Stenseth 1999, Coulson et al. 2001). The influence is both direct, for example through reduced growth or survival (Aanes et al. 2000, Tyler et al. 2008), and indirect, for example through changes in resource distribution, phenology and quality, changes which subsequently influence consumer dynamics (Post et al. 2008). By comparing and contrasting data from three spatially independent populations of ungulates, I discuss how variation in local weather parameters and vegetation growth influence spatial and temporal dynamics through changes in life history parameters and/or behavioural dynamics. The data originate from long term (11-15 years) monitoring data from three populations of ungulates in one subarctic and two high Arctic sites; semi-domesticated reindeer (Rangifer tarandus tarandus) in northern Norway, Svalbard reindeer (R. t. platyrhynchus) on Spitsbergen and muskoxen (Ovibos moschatus) in Northeast Greenland. The results show that juvenile animals can be particularly vulnerable to changes in their environment, and that this is mirrored to different degrees in the spatio-temporal dynamics of the three populations. Adverse weather conditions, acting either directly or mediated through access to and quality of vegetation, experienced by young early in life, or even by their dams during pregnancy, can lead to reduced growth, lower survival and reduced reproductive performance later in life. The influence of current climatic variation, and the predictions of how local weather conditions may change over time, differs between the three sites, resulting in potentially different responses in the three populations. Aanes R, Saether BE and Øritsland NA. 2000. Fluctuations of an introduced population of Svalbard reindeer: the effects of density dependence and climatic variation. Ecography

A framework for understanding semi-permeable barrier effects on migratory ungulates

USGS Publications Warehouse

Sawyer, Hall; Kauffman, Matthew J.; Middleton, Arthur D.; Morrison, Thomas A.; Nielson, Ryan M.; Wyckoff, Teal B.

2013-01-01

1. Impermeable barriers to migration can greatly constrain the set of possible routes and ranges used by migrating animals. For ungulates, however, many forms of development are semi-permeable, and making informed management decisions about their potential impacts to the persistence of migration routes is difficult because our knowledge of how semi-permeable barriers affect migratory behaviour and function is limited. 2. Here, we propose a general framework to advance the understanding of barrier effects on ungulate migration by emphasizing the need to (i) quantify potential barriers in terms that allow behavioural thresholds to be considered, (ii) identify and measure behavioural responses to semi-permeable barriers and (iii) consider the functional attributes of the migratory landscape (e.g. stopovers) and how the benefits of migration might be reduced by behavioural changes. 3. We used global position system (GPS) data collected from two subpopulations of mule deer Odocoileus hemionus to evaluate how different levels of gas development influenced migratory behaviour, including movement rates and stopover use at the individual level, and intensity of use and width of migration route at the population level. We then characterized the functional landscape of migration routes as either stopover habitat or movement corridors and examined how the observed behavioural changes affected the functionality of the migration route in terms of stopover use. 4. We found migratory behaviour to vary with development intensity. Our results suggest that mule deer can migrate through moderate levels of development without any noticeable effects on migratory behaviour. However, in areas with more intensive development, animals often detoured from established routes, increased their rate of movement and reduced stopover use, while the overall use and width of migration routes decreased. 5. Synthesis and applications. In contrast to impermeable barriers that impede animal movement

Ancient origin of endemic Iberian earth-boring dung beetles (Geotrupidae).

PubMed

Cunha, Regina L; Verdú, José R; Lobo, Jorge M; Zardoya, Rafael

2011-06-01

The earth-boring dung beetles belong to the family Geotrupidae that includes more than 350 species classified into three subfamilies Geotrupinae, Lethrinae, and Taurocerastinae, mainly distributed across temperate regions. Phylogenetic relationships within the family are based exclusively on morphology and remain controversial. In the Iberian Peninsula there are 33 species, 20 of them endemic, which suggests that these lineages might have experienced a radiation event. The evolution of morphological adaptations to the Iberian semi-arid environments such as the loss of wings (apterism) or the ability to exploit alternative food resources is thought to have promoted diversification. Here, we present a phylogenetic analysis of 31 species of Geotrupidae, 17 endemic to the Iberian Peninsula, and the remaining from southeastern Europe, Morocco, and Austral South America based on partial mitochondrial and nuclear gene sequence data. The reconstructed maximum likelihood and Bayesian inference phylogenies recovered Geotrupinae and Lethrinae as sister groups to the exclusion of Taurocerastinae. Monophyly of the analyzed geotrupid genera was supported but phylogenetic relationships among genera were poorly resolved. Ancestral character-state reconstruction of wing loss evolution, dating, and diversification tests altogether showed neither evidence of a burst of cladogenesis of the Iberian Peninsula group nor an association between apterism and higher diversification rates. Loss of flight did not accelerate speciation rates but it was likely responsible for the high levels of endemism of Iberian geotrupids by preventing their expansion to central Europe. These Iberian flightless beetle lineages are probably paleoendemics that have survived since the Tertiary in this refuge area during Plio-Pleistocene climatic fluctuations by evolving adaptations to arid and semi-arid environments. Copyright © 2011 Elsevier Inc. All rights reserved.

Reducing Eurasian wild boar (Sus scrofa) population density as a measure for bovine tuberculosis control: effects in wild boar and a sympatric fallow deer (Dama dama) population in Central Spain.

PubMed

García-Jiménez, W L; Fernández-Llario, P; Benítez-Medina, J M; Cerrato, R; Cuesta, J; García-Sánchez, A; Gonçalves, P; Martínez, R; Risco, D; Salguero, F J; Serrano, E; Gómez, L; Hermoso-de-Mendoza, J

2013-07-01

Research on management of bovine tuberculosis (bTB) in wildlife reservoir hosts is crucial for the implementation of effective disease control measures and the generation of practical bTB management recommendations. Among the management methods carried out on wild species to reduce bTB prevalence, the control of population density has been frequently used, with hunting pressure a practical strategy to reduce bTB prevalence. However, despite the number of articles about population density control in different bTB wildlife reservoirs, there is little information regarding the application of such measures on the Eurasian wild boar (Sus scrofa), which is considered the main bTB wildlife reservoir within Mediterranean ecosystems. This study shows the effects of a management measure leading to a radical decrease in wild boar population density at a large hunting estate in Central Spain, in order to assess the evolution of bTB prevalence in both the wild boar population and the sympatric fallow deer population. The evolution of bTB prevalence was monitored in populations of the two wild ungulate species over a 5-year study period (2007-2012). The results showed that bTB prevalence decreased in fallow deer, corresponding to an important reduction in the wild boar population. However, this decrease was not homogeneous: in the last season of study there was an increase in bTB-infected male animals. Moreover, bTB prevalence remained high in the remnant wild boar population. Copyright © 2013 Elsevier B.V. All rights reserved.

Genetic evidence for multiple events of hybridization between wolves and domestic dogs in the Iberian Peninsula.

PubMed

Godinho, Raquel; Llaneza, Luis; Blanco, Juan C; Lopes, Susana; Álvares, Francisco; García, Emilio J; Palacios, Vicente; Cortés, Yolanda; Talegón, Javier; Ferrand, Nuno

2011-12-01

Hybridization between wild species and their domestic counterparts may represent a major threat to natural populations. However, high genetic similarity between the hybridizing taxa makes the detection of hybrids a difficult task and may hinder attempts to assess the impact of hybridization in conservation biology. In this work, we used a combination of 42 autosomal microsatellites together with Y-chromosome microsatellite-defined haplotypes and mtDNA sequences to investigate the occurrence and dynamics of wolf-dog hybridization in the Iberian Peninsula. To do this, we applied a variety of Bayesian analyses and a parallel set of simulation studies to evaluate (i) the differences between Iberian wolves and dogs, (ii) the frequency and geographical distribution of hybridization and (iii) the directionality of hybridization. First, we show that Iberian wolves and dogs form two well-differentiated genetic entities, suggesting that introgressive hybridization is not a widespread phenomenon shaping both gene pools. Second, we found evidence for the existence of hybridization that is apparently restricted to more peripheral and recently expanded wolf populations. Third, we describe compelling evidence suggesting that the dynamics of hybridization in wolf populations is mediated by crosses between male dogs and female wolves. More importantly, the observation of a population showing the occurrence of a continuum of hybrid classes forming mixed packs may indicate that we have underestimated hybridization. If future studies confirm this pattern, then an intriguing avenue of research is to investigate how introgression from free-ranging domestic dogs is enabling wolf populations to adapt to the highly humanized habitats of southern Europe while still maintaining their genetic differentiation. © 2011 Blackwell Publishing Ltd.

Where is the game? Wild meat products authentication in South Africa: a case study.

PubMed

D'Amato, Maria Eugenia; Alechine, Evguenia; Cloete, Kevin Wesley; Davison, Sean; Corach, Daniel

2013-03-01

Wild animals' meat is extensively consumed in South Africa, being obtained either from ranching, farming or hunting. To test the authenticity of the commercial labels of meat products in the local market, we obtained DNA sequence information from 146 samples (14 beef and 132 game labels) for barcoding cytochrome c oxidase subunit I and partial cytochrome b and mitochondrial fragments. The reliability of species assignments were evaluated using BLAST searches in GenBank, maximum likelihood phylogenetic analysis and the character-based method implemented in BLOG. The Kimura-2-parameter intra- and interspecific variation was evaluated for all matched species. The combined application of similarity, phylogenetic and character-based methods proved successful in species identification. Game meat samples showed 76.5% substitution, no beef samples were substituted. The substitutions showed a variety of domestic species (cattle, horse, pig, lamb), common game species in the market (kudu, gemsbok, ostrich, impala, springbok), uncommon species in the market (giraffe, waterbuck, bushbuck, duiker, mountain zebra) and extra-continental species (kangaroo). The mountain zebra Equus zebra is an International Union for Conservation of Nature (IUCN) red listed species. We also detected Damaliscus pygargus, which is composed of two subspecies with one listed by IUCN as 'near threatened'; however, these mitochondrial fragments were insufficient to distinguish between the subspecies. The genetic distance between African ungulate species often overlaps with within-species distance in cases of recent speciation events, and strong phylogeographic structure determines within-species distances that are similar to the commonly accepted distances between species. The reliability of commercial labeling of game meat in South Africa is very poor. The extensive substitution of wild game has important implications for conservation and commerce, and for the consumers making decisions on the basis of

Where is the game? Wild meat products authentication in South Africa: a case study

PubMed Central

2013-01-01

Background Wild animals’ meat is extensively consumed in South Africa, being obtained either from ranching, farming or hunting. To test the authenticity of the commercial labels of meat products in the local market, we obtained DNA sequence information from 146 samples (14 beef and 132 game labels) for barcoding cytochrome c oxidase subunit I and partial cytochrome b and mitochondrial fragments. The reliability of species assignments were evaluated using BLAST searches in GenBank, maximum likelihood phylogenetic analysis and the character-based method implemented in BLOG. The Kimura-2-parameter intra- and interspecific variation was evaluated for all matched species. Results The combined application of similarity, phylogenetic and character-based methods proved successful in species identification. Game meat samples showed 76.5% substitution, no beef samples were substituted. The substitutions showed a variety of domestic species (cattle, horse, pig, lamb), common game species in the market (kudu, gemsbok, ostrich, impala, springbok), uncommon species in the market (giraffe, waterbuck, bushbuck, duiker, mountain zebra) and extra-continental species (kangaroo). The mountain zebra Equus zebra is an International Union for Conservation of Nature (IUCN) red listed species. We also detected Damaliscus pygargus, which is composed of two subspecies with one listed by IUCN as ‘near threatened’; however, these mitochondrial fragments were insufficient to distinguish between the subspecies. The genetic distance between African ungulate species often overlaps with within-species distance in cases of recent speciation events, and strong phylogeographic structure determines within-species distances that are similar to the commonly accepted distances between species. Conclusions The reliability of commercial labeling of game meat in South Africa is very poor. The extensive substitution of wild game has important implications for conservation and commerce, and for the

Seismic Reflection Transect across the Central Iberian Zone (Iberian Massif): The ALCUDIA project

NASA Astrophysics Data System (ADS)

Carbonell, R.; Simancas, F.; Martinez-Poyatos, D.; Ayarza, P.; Gonzalez, P.; Tejero, R.; Martín-Parra, L.; Matas, J.; Gonzalez-Lodeiro, F.; Pérez-Estaún, A.; García-Lobon, J.; Mansilla, L.; Palomeras, I.

2007-12-01

The lithosphere of the Central Iberian Zone (CIZ) differs from that of the southwestern Iberian Massif. They are limited by a suture zone. The seismic reflection profile IBERSEIS suggested that the activity of a Carboniferous mantle plume resulted in abundant intrusions of mafic magmas in the mid-to-lower crust which resulted in a singular crustal evolution. The current knowledge of the area based mostly in surface geological mapping suggests that basic magmatism continues further towards the north, indicating that the mantle plume may have affected a bigger area up to the Tajo depression. Furthermore, the existence of the Almadén mine, one of the largest mercury mine in the world within the CIZ, favour that the crust in this area is the result of anomalous lithospheric processes. Accordingly, the ALCUDIA project has been lauched aiming to study the structure and nature of the lithosphere of the CIZ. It includes the acquisition of a deep high resolution seismic reflection transect, detailed geological mapping, kinematic, petrologic and geochemical studies, and other geophysical studies (potential field methods). This new profile extends the previous IBERSEIS Transect towards the northeast, completing almost 600 km of deep seismic profiles, crossing the southern half of the Iberian Variscides. The transect crosses some important structures, such as the Toledo fault, Santa Elena Fault, Alcudia anticline, Almadén syncline, and some major magnetic anomalies. The preliminary results reveal that the crust is 30 km thick in average, with a horizontal Moho, a highly reflective mid-to-lower crust with a few mantle reflectors and well defined features in the upper crust with the indication of detachments zones that might link to the mid- crustal reflective zone.

Thunder on the Yellowstone revisited: An assessment of management of native ungulates by natural regulation, 1968-1993

USGS Publications Warehouse

Singer, F.J.; Swift, D.M.; Coughenour, M.B.; Varley, J.D.

1998-01-01

Natural regulation of native ungulates was initiated in 1968 in Yellowstone National Park (YNP) based on the premise that ungulates would reach an equilibrium with their plant resources. The natural-regulation management model stated: density dependence will regulate ungulates (i.e., a dynamic equilibrium will result between ungulates and their food supply, within some bounds of vegetation and soil effects); and no retrogression of soil and vegetation will occur from elk (Cervus elaphus) grazing during this process. The historical record indicated that elk were abundant in the system and elk were primarily food limited before settlement by European man (i.e., wolves [Canis lupus] and Native Americans were only an adjunct to the density dependent population regulation of ungulates). Density dependence was demonstrated in elk, but not in bison (Bison bison). No widespread evidence of overgrazing was observed through 1993 in study sites within vegetation communities that comprised about 97% of the winter range. No evidence of increased exotics, increased sediment yield, warming or drying of the soil, changes in soil nutrients, or differences in aboveground standing-crop biomass of plants was found between grazed and ungrazed plots. Ungulate herbivory apparently stimulated aboveground production of grasses, enhanced nitrogen and macronutrients in grasses, increased nutrient cycling, and enhanced measures of fitness in 6 common plants. However, exposed soil surface (bare ground and pebbles combined) was 11-18% greater on grazed than ungrazed plots, apparently due to a 71% decline in dead and standing litter on grazed plots. Percent live-plant basal cover, however, did not differ on grazed versus ungrazed plots, and there was no difference in soil microclimate or sediment yield. Differences in the abundance of 12% of the herbaceous species were found in grazed versus ungrazed sites (16 of 128 species); 10 were declines and 6 were increases. Willow (Salix spp.) and aspen

Using HexSim to assess potential reintroduction sites for a native ungulate

EPA Science Inventory

Background, questions, methods The tule elk (Cervus elaphus nannodes), a subspecies of ungulate endemic to central California, was nearly brought to extinction in the 19th century and is still extirpated from most of its natural range. As part of an ongoing restoration program, ...

The scale-dependent impact of wolf predation risk on resource selection by three sympatric ungulates.

PubMed

Kittle, Andrew M; Fryxell, John M; Desy, Glenn E; Hamr, Joe

2008-08-01

Resource selection is a fundamental ecological process impacting population dynamics and ecosystem structure. Understanding which factors drive selection is vital for effective species- and landscape-level management. We used resource selection probability functions (RSPFs) to study the influence of two forms of wolf (Canis lupus) predation risk, snow conditions and habitat variables on white-tailed deer (Odocoileus virginianus), elk (Cervus elaphus) and moose (Alces alces) resource selection in central Ontario's mixed forest French River-Burwash ecosystem. Direct predation risk was defined as the frequency of a predator's occurrence across the landscape and indirect predation risk as landscape features associated with a higher risk of predation. Models were developed for two winters, each at two spatial scales, using a combination of GIS-derived and ground-measured data. Ungulate presence was determined from snow track transects in 64 16- and 128 1-km(2) resource units, and direct predation risk from GPS radio collar locations of four adjacent wolf packs. Ungulates did not select resources based on the avoidance of areas of direct predation risk at any scale, and instead exhibited selection patterns that tradeoff predation risk minimization with forage and/or mobility requirements. Elk did not avoid indirect predation risk, while both deer and moose exhibited inconsistent responses to this risk. Direct predation risk was more important to models than indirect predation risk but overall, abiotic topographical factors were most influential. These results indicate that wolf predation risk does not limit ungulate habitat use at the scales investigated and that responses to spatial sources of predation risk are complex, incorporating a variety of anti-predator behaviours. Moose resource selection was influenced less by snow conditions than cover type, particularly selection for dense forest, whereas deer showed the opposite pattern. Temporal and spatial scale

The Starkey project: history, facilities, and data collection methods for ungulate research.

Treesearch

Mary M. Rowland; Larry D. Bryant; Bruce K. Johnson; James H. Noyes; Michael J. Wisdom; Jack Ward Thomas

1997-01-01

In the 1980s resource managers were increasingly concerned about effects of timber harvest on ungulates in National Forests. Land and resource management plans incorporated restrictions on timber harvest to maintain cover for Rocky Mountain elk (Cervus elaphus nelsoni V. Bailey) and mule deer (Odocoileus hemionus...

North Atlantic Oscillation influence on the stramflows of the Iberian Rivers

NASA Astrophysics Data System (ADS)

Lorenzo-Lacruz, J.; González-Hidalgo, J. C.; Vicente-Serrano, S. M.; López-Moreno, J. I.

2010-09-01

"NORTH ATLANTIC OSCILLATION INFLUENCE ON THE STREAMFLOWS OF THE IBERIAN RIVERS" LORENZO-LACRUZ, J. ¹, GONZÁLEZ-HIDALGO, J.C.², VICENTE-SERRANO, S.M. ¹, LÓPEZ-MORENO, J.I.¹ ¹Instituto Pirenaico de Ecología, CSIC (Spanish Research Council), Campus de Aula Dei, P.O. Box 202, Zaragoza 50080, Spain ²Departamento de Geografía, Universidad de Zaragoza, Zaragoza, Spain. We analyzed the North Atlantic Oscillation (NAO) influence on the monthly river discharges of Iberian rivers from 1945 to 2005. The study covers most of the Iberian river basins, using 187 monthly discharge series. The aim of this study is to determine the role of the variability of the NAO on the Iberian river discharges. Using the winter NAO we calculated correlations with the monthly river discharge series. We identified the positive and negative phases of the winter NAO for the period 1945-2006, and related to river discharge anomalies. Significant differences in river discharge were found between the positive and negative NAO phases with negative anomalies (dry conditions) during positive NAO periods, and positive anomalies (wet conditions) during negative NAO periods The results show a consistent and strong control of the river discharges by the winter NAO, but some spatial differences are shown, as three different domains were defined: a region under the direct influence of the NAO (central and western part of the Iberian Peninsula), a transition zone (Ebro Valley) and region free from that influence (Eastern part of the Iberian Peninsula). The spatial differences are also identified in the annual pattern of discharge anomalies. The basin characteristics, the location of the gauging stations and the human management are the possible drivers of these differences.

SIFT-MS analysis of Iberian hams from pigs reared under different conditions.

PubMed

Carrapiso, Ana I; Noseda, Bert; García, Carmen; Reina, Raquel; Sánchez Del Pulgar, José; Devlieghere, Frank

2015-06-01

The aim of this study was to investigate the usefulness of a Selected Ion Flow Tube-Mass Spectrometry (SIFT-MS) equipment to tentatively quantify relevant volatile compounds of dry-cured Iberian ham, and to differentiate Iberian hams from pigs reared at four different conditions yielding different commercial grades. The SIFT-MS analysis allowed the rapid quantification of 39 Iberian ham volatile compounds, 16 of them being significantly affected by the rearing conditions of pigs. The full spectra SIFT-MS data allowed the correct classification of 79.2% of hams according to diet, which is a smaller percentage than that obtained using intramuscular fatty acid data (95.8%) obtained by using a gas chromatograph-flame ionization detector after lipid extraction and transesterification. Therefore, the SIFT-MS analysis would be a rapid tool to tentatively quantify some relevant volatile compounds, and also would provide a rapid but rough classification of Iberian ham according to the rearing conditions of pigs. Copyright © 2015 Elsevier Ltd. All rights reserved.

Thermal cover needs of large ungulates: a review of hypothesis tests.

Treesearch

John G. Cook; Larry L. Irwin; Larry D. Bryant; Robert A. Riggs; Jack Ward Thomas

2004-01-01

A great deal of big game research occurred in western North America during the 1960s through the 1980s, and many advances in our knowledge occurred as a result. Timber harvest increased during this period in many localities, and this trend was often perceived to threaten ungulate populations (Hieb 1976). Thus, it is not surprising that appreciable research in this era...

Clusters of Earthquakes In The Southern of Iberian Peninsula

NASA Astrophysics Data System (ADS)

Posadas, A. M.; Luzón, F.; Vidal, F.

The southern part of the Iberian Peninsula forms part of the western border of Eurasia- Africa plate boundary. This area is characterized by the occurrence of earthquakes of moderate magnitude (the maximum magnitude ranging from 4.5 to 5.5). From the point of view of seismic activity, this region is the most active one in he Iberian Penin- sula. Until earlier 80, only the National Seismic Network belonging to the National Geographic Institute monitores the activity in the south of Iberian Peninsula. From 1983 to the actuality, the Andalusian Seismic Network belonging to the Andalusian Geophysics Institute and Seismic Disaster Prevention, records the microseismicity of the area. Nowadays, the earthquakes catalogue used belongs to the Andalusian Insti- tute of Geophysics and Seismic Disaster Prevention and it counts on more than 20000 events registered from 1985 to 2001. Today, after 20 years of recording seismic ac- tivity, statistics analysis of the catalogue have sense. In this paper we present a first approach to the clustering properties of the seismicity in the south of the Iberian Penin- sula. The analysis carried out starts with the study of clustering properties (temporal and spatial properties) in the Southern of Iberian Peninsula seismicity to demonstrate, by using the Fractal Dimension of the temporal earthquake distribution and the Mor- ishita Index of the spatial distribution of earthquakes, that this seismicity is charac- terized by a tendency to form earthquake clusters, both spatial and temporal clusters. As an example, five seismogenetic areas of the zone are analyzed (Adra-Berja, Agron, Alboran, Antequera and Loja). This particular study of the series find out the b param- eter from the Gutenberg-Richter's Law (which characterizes the energetic relaxation of events), the p parameter from Omori's Law (that characterizes the temporal relax- ation of aftershocks) and the Fractal Dimension of the spatial distribution of earth- quakes (to find the

Diptera of forensic importance in the Iberian Peninsula: larval identification key.

PubMed

Velásquez, Y; Magaña, C; Martínez-Sánchez, A; Rojo, S

2010-09-01

A revision of the species and families of sarcosaprophagous flies (Diptera: Calliphoridae, Sarcophagidae, Muscidae, Fanniidae, Drosophilidae, Phoridae, Piophilidae and Stratiomyidae) suitable for forensic purposes in the Iberian Peninsula is presented. Morphological characteristics that allow the accurate identification of third instars of the species present in the Iberian Peninsula are described and presented in the form of a diagnostic key. For larval Calliphoridae, characteristics such as the spines of the body segments were useful for the genus Calliphora whereas features of the anal segment and the cephalopharyngeal skeleton were useful for larvae of Lucilia. Identification of three Chrysominae species present in the Iberian Peninsula is included. For larval Sarcophagidae, characters such as the arrangement and shape of spiracular openings, structures of the anal segment and the cephalopharyngeal skeleton were used for the first time. A new record of Sarcophaga cultellata Pandellé, from a human corpse, is also included as well as recent incursions into the European cadaveric entomofauna such as Synthesiomyia nudiseta (van der Wulp) and Hermetia illucens (Linnaeus). This work provides useful new information that could be applied to forensic investigations in the Iberian Peninsula and in southern Europe.

Elevational range shifts in four mountain ungulate species from the Swiss Alps

Treesearch

Ulf Büntgen; Lucie Greuter; Kurt Bollmann; Hannes Jenny; Andrew Liebhold; J. Diego Galván; Nils C. Stenseth; Carrie Andrew; Atle Mysterud

2017-01-01

Warming-induced range shifts along elevational and latitudinal gradients have been observed in several species from various taxa. The mobility and behavioral plasticity of large endothermic mammals, however, complicate the detection of climatic effects on their spatial distributions. Here, we analyzed 230,565 hunting locations of the four most abundant ungulate species...

The recent (upper Miocene to Quaternary) and present tectonic stress distributions in the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Herraiz, M.; de Vicente, G.; Lindo-Ñaupari, R.; Giner, J.; Simón, J. L.; GonzáLez-Casado, J. M.; Vadillo, O.; RodríGuez-Pascua, M. A.; CicuéNdez, J. I.; Casas, A.; CabañAs, L.; Rincón, P.; CortéS, A. L.; RamíRez, M.; Lucini, M.

2000-08-01

A general synthesis of the recent and present stress situation and evolution in the Iberian Peninsula was obtained from microstructural and seismological analysis. The stress evolution was deduced from (1) fault population analysis (FPA) from 409 sites distributed throughout the Iberian Peninsula, (2) paleostress indicators given by 324 stations taken from the bibliography, and (3) seismic data corresponding to 161 focal mechanisms evenly spread in the studied region. The application of FPA together with the determination of stress tensors and focal mechanisms for the whole Iberian microplate has provided two main results: (1) the Iberian Peninsula is undergoing a NW-SE oriented compression, except for the northeastern part (Pyrenees, Ebro Basin, and Iberian Chain), where it is N-S to NE-SW, and the Gulf of Cádiz, where it seems to be E-W, and (2) the main trends of the stress field have remained almost constant since the upper Miocene. The analysis performed by zones suggests the presence of local heterogeneities in the stress field.

Influence of landscape characteristics on retention of expandable radiocollars on young ungulates

USGS Publications Warehouse

Grovenburg, Troy W.; Klaver, Robert W.; Jacques, Christopher N.; Brinkman, Todd J.; Swanson, Christopher C.; DePerno, Christopher S.; Monteith, Kevin L.; Sievers, Jaret D.; Bleich, Vernon C.; Kie, John G.; Jenks, Jonathan A.

2014-01-01

One tool used for wildlife management is the deployment of radiocollars to gain knowledge of animal populations. Understanding the influence of individual factors (e.g., species, collar characteristics) and landscape characteristics (e.g., forested cover, shrubs, and fencing) on retention of expandable radiocollars for ungulates is important for obtaining empirical data on factors influencing ecology of young-of-the-year ungulates. During 2001–2009, we captured and radiocollared 198 white-tailed deer (Odocoileus virginianus) fawns, 142 pronghorn (Antilocapra americana) fawns, and 73 mule deer (O. hemionus) fawns in South Dakota, Minnesota, and California, USA. We documented 72 (36.4%), 8 (5.6%), and 7 (9.6%) premature (2, SE = 0.1, n = 75) compared with areas where fawns shed collars (x = 3.24 km/km2, SE = 0.1, n = 56) prior to 270 days. Researchers of fawns should consider that radiocollars can be shed prematurely when estimating desired sample size to yield a suitable strength of inference about some natural process of interest.

Ecological Factors Affecting Infection Risk and Population Genetic Diversity of a Novel Potyvirus in Its Native Wild Ecosystem.

PubMed

Rodríguez-Nevado, Cristina; Montes, Nuria; Pagán, Israel

2017-01-01

Increasing evidence indicates that there is ample diversity of plant virus species in wild ecosystems. The vast majority of this diversity, however, remains uncharacterized. Moreover, in these ecosystems the factors affecting plant virus infection risk and population genetic diversity, two traits intrinsically linked to virus emergence, are largely unknown. Along 3 years, we have analyzed the prevalence and diversity of plant virus species from the genus Potyvirus in evergreen oak forests of the Iberian Peninsula, the main wild ecosystem in this geographic region and in the entire Mediterranean basin. During this period, we have also measured plant species diversity, host density, plant biomass, temperature, relative humidity, and rainfall. Results indicated that potyviruses were always present in evergreen oak forests, with a novel virus species explaining the largest fraction of potyvirus-infected plants. We determined the genomic sequence of this novel virus and we explored its host range in natural and greenhouse conditions. Natural host range was limited to the perennial plant mountain rue ( Ruta montana ), commonly found in evergreen oak forests of the Iberian Peninsula. In this host, the virus was highly prevalent and was therefore provisionally named mediterranean ruda virus (MeRV). Focusing in this natural host-virus interaction, we analyzed the ecological factors affecting MeRV infection risk and population genetic diversity in its native wild ecosystem. The main predictor of virus infection risk was the host density. MeRV prevalence was the major factor determining genetic diversity and selection pressures in the virus populations. This observation supports theoretical predictions assigning these two traits a key role in parasite epidemiology and evolution. Thus, our analyses contribute both to characterize viral diversity and to understand the ecological determinants of virus population dynamics in wild ecosystems.

Test development and use in five Iberian Latin American countries.

PubMed

Wechsler, Solange M; Oakland, Thomas; León, Carmem; Vivas, Eleonora; de Almeida, Leandro; Franco, Amanda; Pérez-Solís, María; Contini, Norma

2014-08-01

The abundance of scholarship on test development and use generally is higher in English-speaking than in Iberian Latin American countries. The purpose of this article is to help overcome this imbalance by describing and identifying similarities and differences in test development and use in two Iberian (Portugal and Spain) and three of the largest Latin American (Argentina, Brazil, and Venezuela) countries. The stages of test development in each country, roles of professional associations, presence of standards for test use, professionals' educational training, commonly used tests, together with prominent challenges to continued progress are discussed. Test development and use in these five countries are transitioning from a dependence on the use of translated tests to greater reliance on adapted and finally nationally constructed tests. Continued growth requires adherence to international standards guiding test development and use. Stronger alliance among professional associations in the Iberian Latin American countries could serve as a catalyst to promote test development in these regions. © 2014 International Union of Psychological Science.

Late and middle Pleistocene ungulates dietary diversity in Western Europe indicate variations of Neanderthal paleoenvironments through time and space

NASA Astrophysics Data System (ADS)

Rivals, Florent; Schulz, Ellen; Kaiser, Thomas M.

2009-12-01

Mesowear and microwear on enamel from 763 teeth of middle and late Pleistocene ungulates were analysed to infer the potential of dental wear analysis of faunal remains as a paleoenvironmental and paleoclimatic proxy in relation to climatic changes and diversity of vegetation available in the environment. Fossil localities including levels belonging to two glacial and two interglacial stages were selected in Germany, France, and Spain. At a temporal scale, results indicate that the dietary diversity in ungulates is higher during interglacial phases (MIS 5 and 3) than during pleniglacial phases (MIS 8 and 4). Dietary diversity is concluded to be related to climate-driven vegetation changes which during interglacials lead to increased variety of potential food items available to ungulates. At the geographical scale, during interglacials, changes in diet composition are evident along geographical gradients. The corresponding dietary gradients are proposed to be related to climate and vegetation gradients reflecting more arid climates in the Mediterranean area compared to North-Western Europe. Species consistently represented at all localities investigated are Cervus elaphus (Cervidae, Artiodactyla) and Equus ferus (Equidae, Perissodactyla). C. elaphus populations are found to consistently have less abrasive diets than E. ferus populations but dietary traits of both species varied largely, revealing a significant plasticity in the feeding adaptation of both species. Those traits are concluded to be related to differences in vegetation structure at each locality and complement the evidence that ungulates have broader dietary habits than what is usually assumed.

Root iron uptake efficiency of Ulmus laevis and U. minor and their distribution in soils of the Iberian Peninsula

PubMed Central

Venturas, Martin; Fernández, Victoria; Nadal, Paloma; Guzmán, Paula; Lucena, Juan J.; Gil, Luis

2014-01-01

The calcifuge and calcicole character of wild plants has been related to nutrient availability shortages, including iron (Fe)-deficiency. Surprisingly, just a few studies examined the relation between root Fe uptake and plant distribution in different soil types. We assessed the root Fe acquisition efficiency of two Ulmus species with calcareous (Ulmus minor) and siliceous (U. laevis) soil distribution patterns in the Iberian Peninsula. Seedlings of both elm species were grown hydroponically with different Fe concentrations during 6 weeks. Plant physiological responses to Fe-limiting conditions were evaluated as were the ferric reductase activity and proton (H+) extrusion capacity of the roots. Iron deprived elm seedlings of both species were stunted and suffered severe Fe-chlorosis symptoms. After Fe re-supply leaf chlorophyll concentrations rose according to species-dependent patterns. While U. minor leaves and seedlings re-greened evenly, U. laevis did so along the nerves of new growing leaves. U. minor had a higher root ferric reductase activity and H+-extrusion capability than U. laevis and maintained a better nutrient balance when grown under Fe-limiting conditions. The two elm species were found to have different Fe acquisition efficiencies which may be related to their natural distribution in calcareous and siliceous soils of the Iberian Peninsula. PMID:24723927

Comparing ungulate dietary proxies using discriminant function analysis.

PubMed

Fraser, Danielle; Theodor, Jessica M

2011-12-01

A variety of tooth-wear and morphological dietary proxies have been proposed for ungulates. In turn, they have been applied to fossil specimens with the purpose of reconstructing the diets of extinct taxa. Although these dietary proxies have been used in isolation and in combination, a consistent set of statistical analyses has never been applied to all of the available datasets. The purpose of this study is to determine how well the most commonly used dietary proxies classify ungulates as browsers, grazers, and mixed feeders individually and in combination. Discriminant function analysis is applied to individual dietary proxies (hypsodonty, mesowear, microwear, and several cranial dietary proxies) and to combinations thereof to compare rates of successful dietary classification. In general, the tooth-wear dietary proxies (mesowear and microwear) perform better than morphological dietary proxies, though none are strong proxies in isolation. The success rates of the cranial dietary proxies are not increased substantially when ruminants and bovids are analyzed separately, and significance among the three dietary guilds is reduced when controlling for phylogenetic relatedness. The combination of hypsodonty, mesowear, and microwear is found to have a high rate of successful dietary classification, but a combination of all commonly used proxies increases the success rate to 100%. In most cases, mixed feeders bear the greatest resemblance to browsers suggesting that a morphology intermediate to browsers and grazers may represent a fitness valley resulting from the inability to exploit both browse and graze efficiently. These results are important for future paleoecological studies and should be used as a guide for determining which dietary proxies are appropriate to the research question. Copyright © 2011 Wiley-Liss, Inc.

Lack of sex-biased dispersal promotes fine-scale genetic structure in alpine ungulates

Treesearch

Gretchen H. Roffler; Sandra L. Talbot; Gordon Luikart; George K. Sage; Kristy L. Pilgrim; Layne G. Adams; Michael K. Schwartz

2014-01-01

Identifying patterns of fine-scale genetic structure in natural populations can advance understanding of critical ecological processes such as dispersal and gene flow across heterogeneous landscapes. Alpine ungulates generally exhibit high levels of genetic structure due to female philopatry and patchy configuration of mountain habitats. We assessed the spatial scale...

Stictonectes abellani sp. n. (Coleoptera: Dytiscidae: Hydroporinae) from the Iberian Peninsula, with notes on the phylogeny, ecology and distribution of the Iberian species of the genus.

PubMed

Millán, Andrés; Picazo, Félix; Fery, Hans; Moreno, José Luis; Sánchez-Fernández, David

2013-12-09

Stictonectes abellani sp. n. is described from the Iberian Peninsula. On average, the new species is larger and the colouration of the upper surface darker than in most other species of the genus. Seemingly the species has been confounded with others in the past, particularly S. optatus (Seidlitz, 1887). Males can be separated from externally similar species by studying the shape of the parameres. Additionally, the anterior margin of the clypeus is provided with a distinct rim in both sexes, which is absent or only weakly present in other species. The habitus and the male genitalia of the new species are illustrated, and compared with those of S. optatus. External morphological differences from other members of the genus are discussed. According to studies of the molecular phylogeny, based on fragments of four mitochondrial genes, S. abellani sp. n. is clearly separated from previously described species of Stictonectes Brinck, 1943, apparently being relatively basal within the genus. The new species is rather widely distributed in the south-western part of the Iberian Peninsula, inhabiting pools in small temporary siliceous streams. We provide distributional maps for all eight Iberian Stictonectes and estimate the potential distributional areas of the new species and the other two endemic Iberian species S. occidentalis Fresneda & Fery, 1990 and S. rebeccae Bilton, 2011, based on environmental niche modelling. 

Solar shortwave radiation in the Iberian Peninsula along the last six decades

NASA Astrophysics Data System (ADS)

Bilbao, Julia; Román, Roberto; de Miguel, Argimiro; Pérez-Burgos, Ana

2014-05-01

% confidence) trend of -1.70%dc-1 during the 1950-1984 period, which is the well-known "global dimming" period, and a positive and statistically significant (99% confidence) trend of 1.55%dc-1 during the 1985-2011 period ("global brightening"). As a consequence of the first decrease and then increase in SW, the balance of the annual SW irradiation in the Iberian Peninsula from 1950 to 2011 didn't show any statistically significant trend. References Bilbao, J., Román, R., de Miguel, A., Mateos, D.: Long-term solar erythemal UV irradiance data reconstruction in Spain using a semiempirical method, J. Geophys. Res., 116, D22211, 2011. Sánchez-Lorenzo, A., Calbó, J., Wild, M.: Global and diffuse solar radiation in Spain: Building a homogeneous dataset and assessing their trends, Global Planet. Change, 100, 343-352, 2013a. Zerefos, B., Eleftheratos, K., Meleti, C., Kazadtzis, S., Romanou, A., Ichoku, C., Tselioudis, G., Bais, A.: Solar dimming and brightening over Thessaloniki, Greece, and Beijing, China, Tellus, 61B, 657- 665, 2009.

Use of somatic cell banks in the conservation of wild felids.

PubMed

Praxedes, Érika A; Borges, Alana A; Santos, Maria V O; Pereira, Alexsandra F

2018-05-03

The conservation of biological resources is an interesting strategy for the maintenance of biodiversity, especially for wild felids who are constantly threatened with extinction. For this purpose, cryopreservation techniques have been used for the long-term storage of gametes, embryos, gonadal tissues, and somatic cells and tissues. The establishment of these banks has been suggested as a practical approach to the preservation of species and, when done in tandem with assisted reproductive techniques, could provide the means for reproducing endangered species. Somatic cell banks have been shown remarkable for the conservation of genetic material of felids; by merely obtaining skin samples, it is possible to sample a large group of individuals without being limited by factors such as gender or age. Thus, techniques for somatic tissue recovery, cryopreservation, and in vitro culture of different wild felids have been developed, resulting in a viable method for the conservation of species. One of the most notable conservation programs for wild felines using somatic samples was the one carried out for the Iberian lynx, the most endangered feline in the world. Other wild felids have also been studied in other continents, such as the jaguar in South America. This review aims to present the technical progress achieved in the conservation of somatic cells and tissues in different wild felids, as well address the progress that has been achieved in a few species. © 2018 Wiley Periodicals, Inc.

Niche relationships within a guild of ungulate species in Yellowstone National Park, Wyoming, following release from artificial controls

USGS Publications Warehouse

Singer, Francis J.; Norland, Jack E.

1994-01-01

Niche relationships and diet overlaps were compared among elk (Cervus elaphus), bison (Bison bison), bighorn sheep (Ovis canadensis), mule deer (Odocoileus hemionus), and pronghorn antelope (Antilocapra americana) between 1967–1970 and 1986–1988, a period when total ungulate numbers nearly tripled on Yellowstone's northern range. Ungulate species ratios on Yellowstone's northern winter range during the latter period were 100 elk : 10 mule deer : 3 bison : 2 pronghorns : 1 bighorns. Elk numbers were positively correlated to bison, mule deer, and pronghorn numbers (r2 = 0.76, 0.97, and 0.48, respectively, P < 0.01). Few other changes in habitat use or habitat overlap occurred, and diets for only 2 of the 10 species pairs, elk-bighorn (Spearman's rank order coefficient (RHO) = 0.55, P < 0.05) and mule deer – pronghorn (RHO = 0.64, P < 0.05), were significantly associated with each other. Bison consumed more grass and fewer sedges, mule deer more fringed sage (Artemisia frigida) and more rabbit-brush (Chrysothamnus spp.), and bighorn sheep more grasses and fewer sedges, while pronghorns ate less saltsage (Atriplex nuttalli) but more big sagebrush (Artemisia tridentata) during 1986–1988 than during 1967–1970. Bison expanded their range and bison and bighorn sheep used a wider variety of habitats. We found little evidence of change in competitive interactions between ungulate species. A few diet and habitat overlaps increased, the opposite of the prediction from the competitive exclusion principle amongst species, suggesting that intraspecific competition was more important. Several explanations are proposed for the lack of changes in niche relationships during a period of near tripling in density of the ungulate guild.

Ungulate predation and ecological roles of wolves and coyotes in eastern North America.

PubMed

Benson, John F; Loveless, Karen M; Rutledge, Linda Y; Patterson, Brent R

2017-04-01

Understanding the ecological roles of species that influence ecosystem processes is a central goal of ecology and conservation biology. Eastern coyotes (Canis latrans) have ascended to the role of apex predator across much of eastern North America since the extirpation of wolves (Canis spp.) and there has been considerable confusion regarding their ability to prey on ungulates and their ecological niche relative to wolves. Eastern wolves (C. lycaon) are thought to have been the historical top predator in eastern deciduous forests and have previously been characterized as deer specialists that are inefficient predators of moose because of their smaller size relative to gray wolves (C. lupus). We investigated intrinsic and extrinsic influences on per capita kill rates of white-tailed deer (Odocoileus virginianus) and moose (Alces alces) during winter by sympatric packs of eastern coyotes, eastern wolves, and admixed canids in Ontario, Canada to clarify the predatory ability and ecological roles of the different canid top predators of eastern North America. Eastern coyote ancestry within packs negatively influenced per capita total ungulate (deer and moose combined) and moose kill rates. Furthermore, canids in packs dominated by eastern coyote ancestry consumed significantly less ungulate biomass and more anthropogenic food than packs dominated by wolf ancestry. Similar to gray wolves in previous studies, eastern wolves preyed on deer where they were available. However, in areas were deer were scarce, eastern wolves killed moose at rates similar to those previously documented for gray wolves at comparable moose densities across North America. Eastern coyotes are effective deer predators, but their dietary flexibility and low kill rates on moose suggest they have not replaced the ecological role of wolves in eastern North America. © 2017 by the Ecological Society of America.

Influence of pre-cure freezing of Iberian ham on proteolytic changes throughout the ripening process.

PubMed

Pérez-Palacios, Trinidad; Ruiz, Jorge; Barat, Jose Manuel; Aristoy, María Concepción; Antequera, Teresa

2010-05-01

This work aimed to investigate the effect of pre-cure freezing Iberian hams on proteolysis phenomena throughout the ripening process. Non-protein nitrogen (NPN), peptide nitrogen (PN) and amino acid nitrogen (AN) as well as amino acid and dipeptide evolution followed the same trend in both refrigerated (R) and pre-cure frozen (F) Iberian hams during processing. At the different stages of ripening, there were no differences in the content of NPN and AN while F dry-cured hams had higher levels of PN than R hams at the final step. This seemed to be more related to the salt content (lower in F than in R hams) than to the pre-cure freezing treatment. Most amino acids and dipeptides detected showed higher concentrations in F than in R Iberian hams at the green stage, being rather similar at the intermediate phases. At the final stage, the effects of pre-cure freezing of Iberian hams were not well defined, higher levels of some amino acids and dipeptides were found in R than in F Iberian hams whereas other amino acids were lower in R than in F hams. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

Evaluating the long-term management of introduced ungulates to protect the palila, an endangered bird, and its criticial habitat in subalpine forest of Mauna Kea, Hawai'i

USGS Publications Warehouse

Banko, Paul C.; Hess, Steven C.; Scowcroft, Paul G.; Farmer, Chris; Jacobi, James D.; Stephens, Robert M.; Camp, Richard J.; Leonard, David L.; Brinck, Kevin W.; Juvik, J.O.; Juvik, S. P.

2014-01-01

Under the multiple-use paradigm, conflicts may arise when protection of an endangered species must compete with other management objectives. To resolve such a conflict in the Critical Habitat of the endangered Hawaiian honeycreeper, palila (Loxioides bailleui), federal courts ordered the eradication of introduced ungulates responsible for damaging the māmane (Sophora chrysophylla) forest on which palila depend. During 1980–2011, a total of 18,130 sheep (Ovis aries and O. gmelini musimon) and 310 goats (Capra hircus) were removed from Palila Critical Habitat (PCH) primarily by public hunters (54%) and secondarily by aerial shooting. Nevertheless, our analysis indicates that ungulates have increased over time. Palila numbers have declined sharply since 2003 due to long-term habitat degradation by ungulates and drought. Although culling ungulate populations has allowed some habitat improvement, their complete removal is necessary for palila to recover, especially given the potential for continued drought. Introduced predators are being controlled to reduce palila mortality, māmane and other native trees are being planted to restore some areas, and fencing is being constructed to prevent ungulate immigration. Funds are recently available for more effective eradication efforts, which are urgently needed to eliminate browsing damage in PCH and protect the palila from extinction.

Electronic nose for the identification of pig feeding and ripening time in Iberian hams.

PubMed

Santos, J P; García, M; Aleixandre, M; Horrillo, M C; Gutiérrez, J; Sayago, I; Fernández, M J; Arés, L

2004-03-01

An electronic nose system to control the processing of dry-cured Iberian ham is presented. The sensors involved are tin oxide semiconductors thin films. They were prepared by RF sputtering. Some of the sensors were doped with metal catalysts as Pt and Pd, in order to improve the selectivity of the sensors. The multisensor with 16 semiconductor sensors, gave different responses from two types of dry-cured Iberian hams which differ in the feeding and curing time. The data has been analysed using the PCA (principal component analysis) and backpropagation and probabilistic neural networks. The analysis shows that different types of Iberian ham can be discriminated and identified successfully.

Plant-based remedies for wolf bites and rituals against wolves in the Iberian Peninsula: Therapeutic opportunities and cultural values for the conservation of biocultural diversity.

PubMed

González, José A; Carvalho, Ana Maria; Vallejo, José Ramón; Amich, Francisco

2017-09-14

Combined approaches to local knowledge and folk plant use improve awareness and promote effective strategies for the conservation of significant biocultural patrimony. Moreover, the information reported might be the basis for further appropriate phytochemical and pharmacological research. Therefore we provide an insight into traditional herbal remedies and practices for healing bite injuries in humans and domestic animals caused by the Iberian wolf. Wolf bites are associated with inflammatory processes and rabies is a potential complication AIMS: This paper describes and summarises the medicinal-veterinary empirical and ritual uses of the Iberian flora for wolf injuries and reviews the ethnopharmacological data of specific plants that are already published. The Iberian wolf is a critically endangered subspecies of the grey wolf. Livestock attacks attributed to wolves are increasingly frequent in the Iberian Peninsula, resulting in serious social problems. Interesting strategies for Iberian wolf conservation might be related to traditional grazing practices that are deeply linked with empirical knowledge and local practices passed on by oral tradition, which are also vulnerable now. Based on documentary sources from the beginning of the twentieth century to the present, we systematically searched old monographs, regional documents, technical papers, project reports, as well as the international and national databases and the available scientific literature, without restrictions regarding the language of the publications consulted. A total of 39 remedies for healing wolf bite injuries in humans and domestic animals was reported, highlighting the medicinal use of 33 species of vascular plants, mostly wild herbs, belonging to 18 botanical families. The use of wood ashes was also reported. The number of use-reports found represents a very high number considering similar European studies. Leaves were the predominant plant part mentioned. Boiling plant materials in water

Atlas of Iberian water beetles (ESACIB database).

PubMed

Sánchez-Fernández, David; Millán, Andrés; Abellán, Pedro; Picazo, Félix; Carbonell, José A; Ribera, Ignacio

2015-01-01

The ESACIB ('EScarabajos ACuáticos IBéricos') database is provided, including all available distributional data of Iberian and Balearic water beetles from the literature up to 2013, as well as from museum and private collections, PhD theses, and other unpublished sources. The database contains 62,015 records with associated geographic data (10×10 km UTM squares) for 488 species and subspecies of water beetles, 120 of them endemic to the Iberian Peninsula and eight to the Balearic Islands. This database was used for the elaboration of the "Atlas de los Coleópteros Acuáticos de España Peninsular". In this dataset data of 15 additional species has been added: 11 that occur in the Balearic Islands or mainland Portugal but not in peninsular Spain and an other four with mainly terrestrial habits within the genus Helophorus (for taxonomic coherence). The complete dataset is provided in Darwin Core Archive format.

Atlas of Iberian water beetles (ESACIB database)

PubMed Central

Sánchez-Fernández, David; Millán, Andrés; Abellán, Pedro; Picazo, Félix; Carbonell, José A.; Ribera, Ignacio

2015-01-01

Abstract The ESACIB (‘EScarabajos ACuáticos IBéricos’) database is provided, including all available distributional data of Iberian and Balearic water beetles from the literature up to 2013, as well as from museum and private collections, PhD theses, and other unpublished sources. The database contains 62,015 records with associated geographic data (10×10 km UTM squares) for 488 species and subspecies of water beetles, 120 of them endemic to the Iberian Peninsula and eight to the Balearic Islands. This database was used for the elaboration of the “Atlas de los Coleópteros Acuáticos de España Peninsular”. In this dataset data of 15 additional species has been added: 11 that occur in the Balearic Islands or mainland Portugal but not in peninsular Spain and an other four with mainly terrestrial habits within the genus Helophorus (for taxonomic coherence). The complete dataset is provided in Darwin Core Archive format. PMID:26448717

Surprising migration and population size dynamics in ancient Iberian brown bears (Ursus arctos)

PubMed Central

Valdiosera, Cristina E.; García-Garitagoitia, José Luis; Garcia, Nuria; Doadrio, Ignacio; Thomas, Mark G.; Hänni, Catherine; Arsuaga, Juan-Luis; Barnes, Ian; Hofreiter, Michael; Orlando, Ludovic; Götherström, Anders

2008-01-01

The endangered brown bear populations (Ursus arctos) in Iberia have been suggested to be the last fragments of the brown bear population that served as recolonization stock for large parts of Europe during the Pleistocene. Conservation efforts are intense, and results are closely monitored. However, the efforts are based on the assumption that the Iberian bears are a unique unit that has evolved locally for an extended period. We have sequenced mitochondrial DNA (mtDNA) from ancient Iberian bear remains and analyzed them as a serial dataset, monitoring changes in diversity and occurrence of European haplogroups over time. Using these data, we show that the Iberian bear population has experienced a dynamic, recent evolutionary history. Not only has the population undergone mitochondrial gene flow from other European brown bears, but the effective population size also has fluctuated substantially. We conclude that the Iberian bear population has been a fluid evolutionary unit, developed by gene flow from other populations and population bottlenecks, far from being in genetic equilibrium or isolated from other brown bear populations. Thus, the current situation is highly unusual and the population may in fact be isolated for the first time in its history. PMID:18347332

Surprising migration and population size dynamics in ancient Iberian brown bears (Ursus arctos).

PubMed

Valdiosera, Cristina E; García-Garitagoitia, José Luis; Garcia, Nuria; Doadrio, Ignacio; Thomas, Mark G; Hänni, Catherine; Arsuaga, Juan-Luis; Barnes, Ian; Hofreiter, Michael; Orlando, Ludovic; Götherström, Anders

2008-04-01

The endangered brown bear populations (Ursus arctos) in Iberia have been suggested to be the last fragments of the brown bear population that served as recolonization stock for large parts of Europe during the Pleistocene. Conservation efforts are intense, and results are closely monitored. However, the efforts are based on the assumption that the Iberian bears are a unique unit that has evolved locally for an extended period. We have sequenced mitochondrial DNA (mtDNA) from ancient Iberian bear remains and analyzed them as a serial dataset, monitoring changes in diversity and occurrence of European haplogroups over time. Using these data, we show that the Iberian bear population has experienced a dynamic, recent evolutionary history. Not only has the population undergone mitochondrial gene flow from other European brown bears, but the effective population size also has fluctuated substantially. We conclude that the Iberian bear population has been a fluid evolutionary unit, developed by gene flow from other populations and population bottlenecks, far from being in genetic equilibrium or isolated from other brown bear populations. Thus, the current situation is highly unusual and the population may in fact be isolated for the first time in its history.

Capability of MODIS radiance to analyze Iberian turbid plumes

NASA Astrophysics Data System (ADS)

Fernandez-Novoa, Diego; deCastro, Maite; Des, Marisela; Costoya, Xurxo; Mendes, Renato; Gomez-Gesteira, Moncho

2017-04-01

River plumes are formed near river mouths by freshwater and riverine materials. Therefore, the area influenced by freshwater (salinity plume) is usually negatively correlated with the area occupied by suspension and dissolved material (turbid plume). Suspended material results in a strong signal detected by satellite sensors whereas ocean clear waters have negligible contributions. Thus, remote sensing data, such as radiance obtained from Moderate Resolution Imaging Spectroradiometer (MODIS), are a very useful tool to analyze turbid plumes due to the high spatial and time resolution provided. Here, MODIS capability for characterizing similarities and differences among the most important Iberian plumes was assessed under the influence of their main forcing. Daily radiance data from MODIS-Aqua and MODIS-Terra satellite sensors were processed obtaining a resolution of 500 m. Two approaches are usually used for atmospheric correction treatments: Near-Infrared (NIR) bands and a combined algorithm using NIR and Short Wave Infrared (SWIR) bands. In the particular case of Iberian Peninsula plumes both methods offered similar results, although NIR bands present a lower associated error. MODIS allows working with several bands of normalized water-leaving radiances (nLw). Focusing in the resolution provided, nLw555 and 645 were the most appropriate because both provide the best coverage and correlation with river discharge. The nLw645 band was chosen because has a lower water penetration avoiding overestimations of turbidity caused by shallow seafloor areas and/or upwelling blooms. Daily data from both satellites were merged to enhance the robustness and precision of the study by increasing the number of available pixels. Results indicate that differences between radiance data from both satellites are negligible for Iberian plumes, justifying the merging. By last, each turbid limit, to delimit the respective plume from adjacent seawater, was obtained using two alternative

Lungworm (Nematoda: Protostrongylidae) infection in wild and domestic ruminants from Małopolska region of Poland.

PubMed

Kowal, Jerzy; Kornaś, Sławomir; Nosal, Paweł; Basiaga, Marta; Wajdzik, Marek; Skalska, Marta; Wyrobisz, Anna

2016-01-01

The conducted study has focused on domestic, as well as wild ruminant species. The post mortem examination was carried out on 68 animals, including three wild species: roe deer (Capreolus capreolus) (25 indyviduals), red deer (Cervus elaphus) (6), fallow deer (Dama dama) (5) and two domestic: sheep (Ovis aries) (14) and cattle (Bos taurus) (18). Some of the species have also been investigated in the field by the coproscopical analyses. The faecal samples from roe deer (27), fallow deer (20), red deer (36) and moose (Alces alces) (10) were collected from the environment, while from sheep (10) and goat (Capra hircus) (10)--per rectum. Based on the obtained results the following values were calculated: prevalence, mean intensity and intensity range. The post mortem examination did not reveal pulmonary nematodes neither in domestic nor in wild ungulates, however, the larvae of aforementioned parasites were often stated in the stool samples taken from the environment. All wild species, except fallow deer were infected. Consequently, six species of lungworms have been identified. The first stage larvae of Varestrongylus capreoli occurred in 11 samples of roe deer and Varestrongylus alces in one moose. The larvae of Elaphostrongylus cervi were found in 19 red deer and Varestrongylus sagittatus in 3. Furthermore, Elaphostrongylus alces larvae were noted in 6 moose. Within domestic ruminants only one sheep and two goats were infected by Muellerius capillaris.

Influence of mineral nutrition on susceptibility and recovery of planted seedlings of ungulate browse

Treesearch

Owen T. Burney; Douglass F. Jacobs

2010-01-01

Efforts to minimize animal damage during reforestation in the Oregon Coast Range have had little success. Enhancing plant mineral nutrition via application of controlled-release fertilization at the time of planting may provide some relief from ungulate browse pressure due to increased height growth, but associated impacts on susceptibility of fertilized plants to...

Marine exotic isopods from the Iberian Peninsula and nearby waters.

PubMed

Martínez-Laiz, Gemma; Ros, Macarena; Guerra-García, José M

2018-01-01

Effective management of marine bioinvasions starts with prevention, communication among the scientific community and comprehensive updated data on the distribution ranges of exotic species. Despite being a hotspot for introduction due to numerous shipping routes converging at the Strait of Gibraltar, knowledge of marine exotics in the Iberian Peninsula is scarce, especially of abundant but small-sized and taxonomically challenging taxa such as the Order Isopoda. To fill this gap, we conducted several sampling surveys in 44 marinas and provide the first comprehensive study of marine exotic isopods from the Iberian Peninsula, the southern side of the Strait of Gibraltar (northern Africa) and the Balearic Islands. Exotic species included Ianiropsis serricaudis (first record for the Iberian Peninsula and Lusitanian marine province), Paracerceis sculpta (first record for the Alboran Sea ecoregion), Paradella dianae , Paranthura japonica (earliest record for the Iberian Peninsula) and Sphaeroma walkeri . Photographs with morphological details for identification for non-taxonomic experts are provided, their worldwide distribution is updated and patterns of invasion are discussed. We report an expansion in the distribution range of all species, especially at the Strait of Gibraltar and nearby areas. Ianiropsis serricaudis and Paranthura japonica are polyvectic, with shellfish trade and recreational boating being most probable vectors for their introduction and secondary spread. The subsequent finding of the studied species in additional marinas over the years points at recreational boating as a vector and indicates a future spread. We call for attention to reduce lags in the detection and reporting of small-size exotics, which usually remain overlooked or underestimated until the invasion process is at an advanced stage.

Marine exotic isopods from the Iberian Peninsula and nearby waters

PubMed Central

Ros, Macarena; Guerra-García, José M.

2018-01-01

Effective management of marine bioinvasions starts with prevention, communication among the scientific community and comprehensive updated data on the distribution ranges of exotic species. Despite being a hotspot for introduction due to numerous shipping routes converging at the Strait of Gibraltar, knowledge of marine exotics in the Iberian Peninsula is scarce, especially of abundant but small-sized and taxonomically challenging taxa such as the Order Isopoda. To fill this gap, we conducted several sampling surveys in 44 marinas and provide the first comprehensive study of marine exotic isopods from the Iberian Peninsula, the southern side of the Strait of Gibraltar (northern Africa) and the Balearic Islands. Exotic species included Ianiropsis serricaudis (first record for the Iberian Peninsula and Lusitanian marine province), Paracerceis sculpta (first record for the Alboran Sea ecoregion), Paradella dianae, Paranthura japonica (earliest record for the Iberian Peninsula) and Sphaeroma walkeri. Photographs with morphological details for identification for non-taxonomic experts are provided, their worldwide distribution is updated and patterns of invasion are discussed. We report an expansion in the distribution range of all species, especially at the Strait of Gibraltar and nearby areas. Ianiropsis serricaudis and Paranthura japonica are polyvectic, with shellfish trade and recreational boating being most probable vectors for their introduction and secondary spread. The subsequent finding of the studied species in additional marinas over the years points at recreational boating as a vector and indicates a future spread. We call for attention to reduce lags in the detection and reporting of small-size exotics, which usually remain overlooked or underestimated until the invasion process is at an advanced stage. PMID:29507825

Can Iberian red deer (Cervus elaphus hispanicus) discriminate among essential minerals in their diet?

PubMed

Ceacero, Francisco; Landete-Castillejos, Tomás; García, Andrés J; Estévez, José A; Gallego, Laureano

2010-02-01

Optimal foraging predicts that animals should be able to assess the content of important nutrients in food. Ungulates discriminate salt and P, but discrimination of other minerals is controversial even though they are also essential and often limiting. Animal scientists have explained this taste through palatability, which predicts the same pattern of discrimination for calves and hinds and greater consumption by the latter. Social learning may also be involved, predicting a correlation between mother and calf and less consumption by the latter. The present study examines the consumption behaviour of free-choice supplemented minerals by hinds and calves of Iberian red deer (Cervus elaphus hispanicus) to discern between these hypotheses. Behavioural indices of intake correlated with actual mineral consumption (P < 0.001). Mother and calf behavioural indices correlated only for salt-mixed minerals. Calves showed overall behavioural indices of consumption greater than hinds (P < 0.01 and P < 0.001), and also for all single supplements except NaCl, as expected from growth needs and in contrast to the palatability hypothesis. Calves showed a greater consumption of CuSO(4) and lower of Na(2)SeO(3) than pure salt. Hinds showed a different pattern, ingesting lower amounts of all minerals except CuSO(4) and salt. Additional analyses also showed discrimination between minerals unmixed with salt, such as CaHPO(4) and CaCO(3) (P = 0.012 and P = 0.020). The greater intake of growing calves and the different consumption patterns for hinds and calves suggest that deer can discriminate among minerals, and that they do not consume minerals for their palatability or driven by social learning. Therefore, deer may be selecting minerals according to nutritional requirements.

Genetic Footprints of Iberian Cattle in America 500 Years after the Arrival of Columbus

PubMed Central

Martínez, Amparo M.; Gama, Luis T.; Cañón, Javier; Ginja, Catarina; Delgado, Juan V.; Dunner, Susana; Landi, Vincenzo; Martín-Burriel, Inmaculada; Penedo, M. Cecilia T.; Rodellar, Clementina; Vega-Pla, Jose Luis; Acosta, Atzel; Álvarez, Luz A.; Camacho, Esperanza; Cortés, Oscar; Marques, Jose R.; Martínez, Roberto; Martínez, Ruben D.; Melucci, Lilia; Martínez-Velázquez, Guillermo; Muñoz, Jaime E.; Postiglioni, Alicia; Quiroz, Jorge; Sponenberg, Philip; Uffo, Odalys; Villalobos, Axel; Zambrano, Delsito; Zaragoza, Pilar

2012-01-01

Background American Creole cattle presumably descend from animals imported from the Iberian Peninsula during the period of colonization and settlement, through different migration routes, and may have also suffered the influence of cattle directly imported from Africa. The introduction of European cattle, which began in the 18th century, and later of Zebu from India, has threatened the survival of Creole populations, some of which have nearly disappeared or were admixed with exotic breeds. Assessment of the genetic status of Creole cattle is essential for the establishment of conservation programs of these historical resources. Methodology/Principal Findings We sampled 27 Creole populations, 39 Iberian, 9 European and 6 Zebu breeds. We used microsatellite markers to assess the origins of Creole cattle, and to investigate the influence of different breeds on their genetic make-up. The major ancestral contributions are from breeds of southern Spain and Portugal, in agreement with the historical ports of departure of ships sailing towards the Western Hemisphere. This Iberian contribution to Creoles may also include some African influence, given the influential role that African cattle have had in the development of Iberian breeds, but the possibility of a direct influence on Creoles of African cattle imported to America can not be discarded. In addition to the Iberian influence, the admixture with other European breeds was minor. The Creoles from tropical areas, especially those from the Caribbean, show clear signs of admixture with Zebu. Conclusions/Significance Nearly five centuries since cattle were first brought to the Americas, Creoles still show a strong and predominant signature of their Iberian ancestors. Creole breeds differ widely from each other, both in genetic structure and influences from other breeds. Efforts are needed to avoid their extinction or further genetic erosion, which would compromise centuries of selective adaptation to a wide range of

Timing of head movements is consistent with energy minimization in walking ungulates

PubMed Central

Loscher, David M.; Meyer, Fiete; Kracht, Kerstin

2016-01-01

Many ungulates show a conspicuous nodding motion of the head when walking. Until now, the functional significance of this behaviour remained unclear. Combining in vivo kinematics of quadrupedal mammals with a computer model, we show that the timing of vertical displacements of the head and neck is consistent with minimizing energy expenditure for carrying these body parts in an inverted pendulum walking gait. Varying the timing of head movements in the model resulted in increased metabolic cost estimate for carrying the head and neck of up to 63%. Oscillations of the head–neck unit result in weight force oscillations transmitted to the forelimbs. Advantageous timing increases the load in single support phases, in which redirecting the trajectory of the centre of mass (COM) is thought to be energetically inexpensive. During double support, in which—according to collision mechanics—directional changes of the impulse of the COM are expensive, the observed timing decreases the load. Because the head and neck comprise approximately 10% of body mass, the effect shown here should also affect the animals' overall energy expenditure. This mechanism, working analogously in high-tech backpacks for energy-saving load carriage, is widespread in ungulates, and provides insight into how animals economize locomotion. PMID:27903873

Ungulate Reproductive Parameters Track Satellite Observations of Plant Phenology across Latitude and Climatological Regimes.

PubMed

Stoner, David C; Sexton, Joseph O; Nagol, Jyoteshwar; Bernales, Heather H; Edwards, Thomas C

2016-01-01

The effect of climatically-driven plant phenology on mammalian reproduction is one key to predicting species-specific demographic responses to climate change. Large ungulates face their greatest energetic demands from the later stages of pregnancy through weaning, and so in seasonal environments parturition dates should match periods of high primary productivity. Interannual variation in weather influences the quality and timing of forage availability, which can influence neonatal survival. Here, we evaluated macro-scale patterns in reproductive performance of a widely distributed ungulate (mule deer, Odocoileus hemionus) across contrasting climatological regimes using satellite-derived indices of primary productivity and plant phenology over eight degrees of latitude (890 km) in the American Southwest. The dataset comprised > 180,000 animal observations taken from 54 populations over eight years (2004-2011). Regionally, both the start and peak of growing season ("Start" and "Peak", respectively) are negatively and significantly correlated with latitude, an unusual pattern stemming from a change in the dominance of spring snowmelt in the north to the influence of the North American Monsoon in the south. Corresponding to the timing and variation in both the Start and Peak, mule deer reproduction was latest, lowest, and most variable at lower latitudes where plant phenology is timed to the onset of monsoonal moisture. Parturition dates closely tracked the growing season across space, lagging behind the Start and preceding the Peak by 27 and 23 days, respectively. Mean juvenile production increased, and variation decreased, with increasing latitude. Temporally, juvenile production was best predicted by primary productivity during summer, which encompassed late pregnancy, parturition, and early lactation. Our findings offer a parsimonious explanation of two key reproductive parameters in ungulate demography, timing of parturition and mean annual production, across

Rate of Decline of the Oriental White-Backed Vulture Population in India Estimated from a Survey of Diclofenac Residues in Carcasses of Ungulates

PubMed Central

Green, Rhys E.; Taggart, Mark A.; Senacha, Kalu Ram; Raghavan, Bindu; Pain, Deborah J.; Jhala, Yadvendradev; Cuthbert, Richard

2007-01-01

The non-steroidal anti-inflammatory drug diclofenac is a major cause of the rapid declines in the Indian subcontinent of three species of vultures endemic to South Asia. The drug causes kidney failure and death in vultures. Exposure probably arises through vultures feeding on carcasses of domesticated ungulates treated with the drug. However, before the study reported here, it had not been established from field surveys of ungulate carcasses that a sufficient proportion was contaminated to cause the observed declines. We surveyed diclofenac concentrations in samples of liver from carcasses of domesticated ungulates in India in 2004–2005. We estimated the concentration of diclofenac in tissues available to vultures, relative to that in liver, and the proportion of vultures killed after feeding on a carcass with a known level of contamination. We assessed the impact of this mortality on vulture population trend with a population model. We expected levels of diclofenac found in ungulate carcasses in 2004–2005 to cause oriental white-backed vulture population declines of 80–99% per year, depending upon the assumptions used in the model. This compares with an observed rate of decline, from road transect counts, of 48% per year in 2000–2003. The precision of the estimate based upon carcass surveys is low and the two types of estimate were not significantly different. Our analyses indicate that the level of diclofenac contamination found in carcasses of domesticated ungulates in 2004–2005 was sufficient to account for the observed rapid decline of the oriental white-backed vulture in India. The methods we describe could be used again to assess changes in the effect on vulture population trend of diclofenac and similar drugs. In this way, the effectiveness of the recent ban in India on the manufacture and importation of diclofenac for veterinary use could be monitored. PMID:17668064

Body-size structure of Central Iberian mammal fauna reveals semidesertic conditions during the middle Miocene Global Cooling Event.

PubMed

Menéndez, Iris; Gómez Cano, Ana R; García Yelo, Blanca A; Domingo, Laura; Domingo, M Soledad; Cantalapiedra, Juan L; Blanco, Fernando; Hernández Fernández, Manuel

2017-01-01

We developed new quantitative palaeoclimatic inference models based on the body-size structure of mammal faunas from the Old World tropics and applied them to the Somosaguas fossil site (middle Miocene, central Iberian Peninsula). Twenty-six mammal species have been described at this site, including proboscideans, ungulates, carnivores, insectivores, lagomorphs and rodents. Our analyses were based on multivariate and bivariate regression models correlating climatic data and body-size structure of 63 modern mammal assemblages from Sub-Saharan Africa and the Indian subcontinent. The results showed an average temperature of the coldest month higher than 26°C for the Somosaguas fossil site, a mean annual thermal amplitude around 10°C, a drought length of 10 months, and an annual total precipitation greater than 200 mm per year, which are climate conditions typical of an ecotonal zone between the savanna and desert biomes. These results are congruent with the aridity peaks described over the middle Aragonian of Spain and particularly in the local biozone E, which includes Somosaguas. The aridity increase detected in this biozone is associated with the Middle Miocene Global Cooling Event. The environment of Somosaguas around 14 Ma was similar to the current environment in the Sahel region of North Africa, the Horn of Africa, the boundary area between the Kalahari and the Namib in Southern Africa, south-central Arabia, or eastern Pakistan and northwestern India. The distribution of modern vegetation in these regions follows a complex mosaic of plant communities, dominated by scattered xerophilous shrublands, semidesert grasslands, and vegetation linked to seasonal watercourses and ponds.

Body-size structure of Central Iberian mammal fauna reveals semidesertic conditions during the middle Miocene Global Cooling Event

PubMed Central

Gómez Cano, Ana R.; García Yelo, Blanca A.; Domingo, Laura; Domingo, M. Soledad; Cantalapiedra, Juan L.; Blanco, Fernando; Hernández Fernández, Manuel

2017-01-01

We developed new quantitative palaeoclimatic inference models based on the body-size structure of mammal faunas from the Old World tropics and applied them to the Somosaguas fossil site (middle Miocene, central Iberian Peninsula). Twenty-six mammal species have been described at this site, including proboscideans, ungulates, carnivores, insectivores, lagomorphs and rodents. Our analyses were based on multivariate and bivariate regression models correlating climatic data and body-size structure of 63 modern mammal assemblages from Sub-Saharan Africa and the Indian subcontinent. The results showed an average temperature of the coldest month higher than 26°C for the Somosaguas fossil site, a mean annual thermal amplitude around 10°C, a drought length of 10 months, and an annual total precipitation greater than 200 mm per year, which are climate conditions typical of an ecotonal zone between the savanna and desert biomes. These results are congruent with the aridity peaks described over the middle Aragonian of Spain and particularly in the local biozone E, which includes Somosaguas. The aridity increase detected in this biozone is associated with the Middle Miocene Global Cooling Event. The environment of Somosaguas around 14 Ma was similar to the current environment in the Sahel region of North Africa, the Horn of Africa, the boundary area between the Kalahari and the Namib in Southern Africa, south-central Arabia, or eastern Pakistan and northwestern India. The distribution of modern vegetation in these regions follows a complex mosaic of plant communities, dominated by scattered xerophilous shrublands, semidesert grasslands, and vegetation linked to seasonal watercourses and ponds. PMID:29073193

Unmanned Aircraft Systems for Studying Spatial Abundance of Ungulates: Relevance to Spatial Epidemiology

PubMed Central

Barasona, José A.; Mulero-Pázmány, Margarita; Acevedo, Pelayo; Negro, Juan J.; Torres, María J.; Gortázar, Christian; Vicente, Joaquín

2014-01-01

Complex ecological and epidemiological systems require multidisciplinary and innovative research. Low cost unmanned aircraft systems (UAS) can provide information on the spatial pattern of hosts’ distribution and abundance, which is crucial as regards modelling the determinants of disease transmission and persistence on a fine spatial scale. In this context we have studied the spatial epidemiology of tuberculosis (TB) in the ungulate community of Doñana National Park (South-western Spain) by modelling species host (red deer, fallow deer and cattle) abundance at fine spatial scale. The use of UAS high-resolution images has allowed us to collect data to model the environmental determinants of host abundance, and in a further step to evaluate their relationships with the spatial risk of TB throughout the ungulate community. We discuss the ecological, epidemiological and logistic conditions under which UAS may contribute to study the wildlife/livestock sanitary interface, where the spatial aggregation of hosts becomes crucial. These findings are relevant for planning and implementing research, fundamentally when managing disease in multi-host systems, and focusing on risky areas. Therefore, managers should prioritize the implementation of control strategies to reduce disease of conservation, economic and social relevance. PMID:25551673

Long-term patterns in Iberian hare population dynamics in a protected area (Doñana National Park) in the southwestern Iberian Peninsula: Effects of weather conditions and plant cover.

PubMed

Carro, Francisco; Soriguer, Ramón C

2017-01-01

The Iberian hare (Lepus granatensis) is a widely distributed endemic species in the Iberian Peninsula. To improve our knowledge of its population dynamics, the relative abundance and population trends of the Iberian hare were studied in the autumns of 1995-2012 in a protected area (Doñana National Park) by spotlighting in 2 different habitats: marshland and ecotones. The average relative abundance was 0.38 hare/km (SD = 0.63) in the marshland and 3.6 hares/km (SD = 4.09) in ecotones. The Iberian hare population exhibited local interannual fluctuations and a negative population trend during the study period (1995-2012). The results suggest that its populations are in decline. The flooding of parts of the marshland in June, July and October favor hare abundance in the ecotone. Hare abundance in the marshland increases as the flooded surface area increases in October. These effects are more pronounced if the rains are early (October) and partially flood the marsh. By contrast, when marsh grasses and graminoids are very high and thick (as measured using the aerial herbaceous biomass [biomass marshland] as a proxy), the abundance of hares decreases dramatically as does the area of the marsh that is flooded (in November). © 2016 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

Pre-cure freezing effect on physicochemical, texture and sensory characteristics of Iberian ham.

PubMed

Pérez-Palacios, T; Ruiz, J; Martín, D; Barat, J M; Antequera, T

2011-04-01

The aim of this work was to investigate the effect of pre-cure freezing on the physicochemical, texture and sensory characteristics of raw and dry-cured hams. Both, refrigerated (R) and pre-cure frozen (F) hams showed the same weight losses during the processing. At the green stage F Iberian hams had lower moisture content, higher values of a* and chroma, lower hardness and chewiness and higher adhesiveness and springiness than R ones. However, at the end of the processing R and F Iberian hams only were different in salt content, F hams showing lower values than R ones. Sensory analysis of Iberian dry-cured ham did not show differences in salty taste. Panelist detected a higher fat hardness and lean pastiness in F than in R hams. The overall acceptability for both groups of dry-cured hams was between average and good.

SNP discovery in candidate adaptive genes using exon capture in a free-ranging alpine ungulate

Treesearch

Gretchen H. Roffler; Stephen J. Amish; Seth Smith; Ted Cosart; Marty Kardos; Michael K. Schwartz; Gordon Luikart

2016-01-01

Identification of genes underlying genomic signatures of natural selection is key to understanding adaptation to local conditions. We used targeted resequencing to identify SNP markers in 5321 candidate adaptive genes associated with known immunological, metabolic and growth functions in ovids and other ungulates. We selectively targeted 8161 exons in protein-coding...

Methicillin resistant Staphylococcus aureus (MRSA) carriage in different free-living wild animal species in Spain.

PubMed

Porrero, M Concepción; Mentaberre, Gregorio; Sánchez, Sergio; Fernández-Llario, Pedro; Gómez-Barrero, Susana; Navarro-Gonzalez, Nora; Serrano, Emmanuel; Casas-Díaz, Encarna; Marco, Ignasi; Fernández-Garayzabal, José-Francisco; Mateos, Ana; Vidal, Dolors; Lavín, Santiago; Domínguez, Lucas

2013-10-01

Methicillin-resistant Staphylococcus aureus (MRSA) is a life-threatening pathogen in humans and its presence in animals is a public health concern. The aim of this study was to measure the prevalence of MRSA in free-living wild animals. Samples from red deer (n=273), Iberian ibex (n=212), Eurasian Griffon vulture (n=40) and wild boar (n=817) taken from different areas in Spain between June 2008 and November 2011 were analyzed. Characterization of the isolates was performed by spa typing, multi-locus sequence typing (MLST) and antimicrobial susceptibility testing. A low prevalence of MRSA was found with 13 isolates obtained from 12 animals (0.89%; 95% CI: 0.46-1.56). All MRSA sequence types belonged to ST398 (t011 and t1451) and ST1 (t127). Genotypes and antimicrobial susceptibility patterns (tetracycline resistance in ST398 and clindamycin-erythromycin-tetracycline resistance in ST1) suggest that the MRSA found probably originated in livestock (ST398) or humans (ST1). This is the first report of MRSA carriers in free-living wild animals in Europe. Although our data showed that MRSA prevalence is currently low, free-living wild animals might act as reservoir and represent a potential risk for human health. Copyright © 2013 Elsevier Ltd. All rights reserved.

Supplemental feeding alters migration of a temperate ungulate.

PubMed

Jones, Jennifer D; Kauffman, Matthew J; Monteith, Kevin L; Scurlock, Brandon M; Albeke, Shannon E; Cross, Paul C

Conservation of migration requires information on behavior and environmental determinants. The spatial distribution of forage resources, which migration exploits, often are altered and may have subtle, unintended consequences. Supplemental feeding is a common management practice, particularly for ungulates in North America and Europe, and carryover effects on behavior of this anthropogenic manipulation of forage are expected in theory, but have received limited empirical evaluation, particularly regarding effects on migration. We used global positioning system (GPS) data to evaluate the influence of winter feeding on migration behavior of 219 adult female elk (Cervus elaphus) from 18 fed ranges and 4 unfed ranges in western Wyoming. Principal component analysis revealed that the migratory behavior of fed and unfed elk differed in distance migrated, and the timing of arrival to, duration on, and departure from summer range. Fed elk migrated 19.2 km less, spent 11 more days on stopover sites, arrived to summer range 5 days later, resided on summer range 26 fewer days, and departed in the autumn 10 days earlier than unfed elk. Time-to-event models indicated that differences in migratory behavior between fed and unfed elk were caused by altered sensitivity to the environmental drivers of migration. In spring, unfed elk migrated following plant green-up closely, whereas fed elk departed the feedground but lingered on transitional range, thereby delaying their arrival to summer range. In autumn, fed elk were more responsive to low temperatures and precipitation events, causing earlier departure from summer range than unfed elk. Overall, supplemental feeding disconnected migration by fed elk from spring green-up and decreased time spent on summer range, thereby reducing access to quality forage. Our findings suggest that ungulate migration can be substantially altered by changes to the spatial distribution of resources, including those of anthropogenic origin, and that

Supplemental feeding alters migration of a temperate ungulate

USGS Publications Warehouse

Jones, Jennifer D; Kauffman, Matthew J.; Monteith, Kevin L.; Scurlock, Brandon M.; Albeke, Shannon E.; Cross, Paul C.

2014-01-01

Conservation of migration requires information on behavior and environmental determinants. The spatial distribution of forage resources, which migration exploits, often are altered and may have subtle, unintended consequences. Supplemental feeding is a common management practice, particularly for ungulates in North America and Europe, and carryover effects on behavior of this anthropogenic manipulation of forage are expected in theory, but have received limited empirical evaluation, particularly regarding effects on migration. We used global positioning system (GPS) data to evaluate the influence of winter feeding on migration behavior of 219 adult female elk (Cervus elaphus) from 18 fed ranges and 4 unfed ranges in western Wyoming. Principal component analysis revealed that the migratory behavior of fed and unfed elk differed in distance migrated, and the timing of arrival to, duration on, and departure from summer range. Fed elk migrated 19.2 km less, spent 11 more days on stopover sites, arrived to summer range 5 days later, resided on summer range 26 fewer days, and departed in the autumn 10 days earlier than unfed elk. Time-to-event models indicated that differences in migratory behavior between fed and unfed elk were caused by altered sensitivity to the environmental drivers of migration. In spring, unfed elk migrated following plant green-up closely, whereas fed elk departed the feedground but lingered on transitional range, thereby delaying their arrival to summer range. In autumn, fed elk were more responsive to low temperatures and precipitation events, causing earlier departure from summer range than unfed elk. Overall, supplemental feeding disconnected migration by fed elk from spring green-up and decreased time spent on summer range, thereby reducing access to quality forage. Our findings suggest that ungulate migration can be substantially altered by changes to the spatial distribution of resources, including those of anthropogenic origin, and that

Environmental isolation explains Iberian genetic diversity in the highly homozygous model grass Brachypodium distachyon.

PubMed

Marques, Isabel; Shiposha, Valeriia; López-Alvarez, Diana; Manzaneda, Antonio J; Hernandez, Pilar; Olonova, Marina; Catalán, Pilar

2017-06-15

Brachypodium distachyon (Poaceae), an annual Mediterranean Aluminum (Al)-sensitive grass, is currently being used as a model species to provide new information on cereals and biofuel crops. The plant has a short life cycle and one of the smallest genomes in the grasses being well suited to experimental manipulation. Its genome has been fully sequenced and several genomic resources are being developed to elucidate key traits and gene functions. A reliable germplasm collection that reflects the natural diversity of this species is therefore needed for all these genomic resources. However, despite being a model plant, we still know very little about its genetic diversity. As a first step to overcome this gap, we used nuclear Simple Sequence Repeats (nSSR) to study the patterns of genetic diversity and population structure of B. distachyon in 14 populations sampled across the Iberian Peninsula (Spain), one of its best known areas. We found very low levels of genetic diversity, allelic number and heterozygosity in B. distachyon, congruent with a highly selfing system. Our results indicate the existence of at least three genetic clusters providing additional evidence for the existence of a significant genetic structure in the Iberian Peninsula and supporting this geographical area as an important genetic reservoir. Several hotspots of genetic diversity were detected and populations growing on basic soils were significantly more diverse than those growing in acidic soils. A partial Mantel test confirmed a statistically significant Isolation-By-Distance (IBD) among all studied populations, as well as a statistically significant Isolation-By-Environment (IBE) revealing the presence of environmental-driven isolation as one explanation for the genetic patterns found in the Iberian Peninsula. The finding of higher genetic diversity in eastern Iberian populations occurring in basic soils suggests that these populations can be better adapted than those occurring in western areas

Instrumental colour of Iberian ham subcutaneous fat and lean (biceps femoris): Influence of crossbreeding and rearing system.

PubMed

Carrapiso, Ana I; García, Carmen

2005-10-01

The influence of crossbreeding (Iberian vs Iberian×Duroc 50% pigs) and rearing system (Montanera vs Pienso) on the instrumental colour of Iberian ham (subcutaneous fat and biceps femoris muscle) and the relationships to sensory appearance and chemical composition were researched by using a factorial design. In subcutaneous fat, a significant effect (p<0.05) of crossbreeding and rearing system was found: b* and chroma were larger in hams from Iberian pigs than from Iberian×Duroc (50%) pigs, and L*, a* and chroma were larger in Pienso hams than in Montanera hams. CIEL*a*b* variables of subcutaneous fat were closely related to subcutaneous fatty acid composition, the largest correlationships involving L* (L* and 18:0, 0.652, p<0.001; L* and 18:1, -0.616, p<0.001). Instrumental colour variables and sensory appearance were also correlated (L* and fat pinkness, -0.539, p<0.001). In lean (biceps femoris), instrumental colour data was not affected by crossbreeding and rearing system. CIEL*a*b* variables were not related to chemical composition (moisture, NaCl, intramuscular fat and pigment content), although they were correlated to sensory appearance (L* and marbling, 0.419, p=0.014).

Host and Environmental Factors Modulate the Exposure of Free-Ranging and Farmed Red Deer (Cervus elaphus) to Coxiella burnetii

PubMed Central

Velasco Ávila, Ana Luisa; Boadella, Mariana; Beltrán-Beck, Beatriz; Barasona, José Ángel; Santos, João P. V.; Queirós, João; García-Pérez, Ana L.; Barral, Marta; Ruiz-Fons, Francisco

2015-01-01

The control of multihost pathogens, such as Coxiella burnetii, should rely on accurate information about the roles played by the main hosts. We aimed to determine the involvement of the red deer (Cervus elaphus) in the ecology of C. burnetii. We predicted that red deer populations from broad geographic areas within a European context would be exposed to C. burnetii, and therefore, we hypothesized that a series of factors would modulate the exposure of red deer to C. burnetii. To test this hypothesis, we designed a retrospective survey of 47 Iberian red deer populations from which 1,751 serum samples and 489 spleen samples were collected. Sera were analyzed by enzyme-linked immunosorbent assays (ELISA) in order to estimate exposure to C. burnetii, and spleen samples were analyzed by PCR in order to estimate the prevalence of systemic infections. Thereafter, we gathered 23 variables—within environmental, host, and management factors—potentially modulating the risk of exposure of deer to C. burnetii, and we performed multivariate statistical analyses to identify the main risk factors. Twenty-three populations were seropositive (48.9%), and C. burnetii DNA in the spleen was detected in 50% of the populations analyzed. The statistical analyses reflect the complexity of C. burnetii ecology and suggest that although red deer may maintain the circulation of C. burnetii without third species, the most frequent scenario probably includes other wild and domestic host species. These findings, taken together with previous evidence of C. burnetii shedding by naturally infected red deer, point at this wild ungulate as a true reservoir for C. burnetii and an important node in the life cycle of C. burnetii, at least in the Iberian Peninsula. PMID:26150466

Geochemistry and metamorphism of the Mouriscas Complex, Ossa-Morena/Central Iberian zone boundary, Iberian Massif, Central Portugal: Implications for the Cadomian and Variscan orogenies

NASA Astrophysics Data System (ADS)

Henriques, S. B. A.; Neiva, A. M. R.; Tajčmanová, L.; Dunning, G. R.

2018-01-01

The Mouriscas Complex is a deformed and metamorphosed predominantly mafic igneous complex of Ediacaran and Ordovician age and crops out at the Ossa-Morena/Central Iberian zone boundary in the Iberian Massif, Central Portugal. It comprises amphibolite with Neoproterozoic protoliths (ca. 544 Ma), protomylonitic felsic dykes derived from younger trondhjemitic protoliths (ca. 483 Ma) and garnet amphibolite derived of even younger dioritic protoliths (ca. 477 Ma). The protoliths of the Neoproterozoic amphibolites are calc-alkaline magmas of basic to intermediate compositions with intraplate and active continental margin affinities and are considered to represent the final phase of the Cadomian arc magmatism. They are interpreted to have originated as coarse-grained intrusions, likely gabbro or diorite and generated from the partial melting of meta-igneous lower crust and mantle. Their emplacement occurred near the Cadomian metamorphic event dated at ca. 540 Ma (P = 7-8 kbar and T = 640-660 °C) which is interpreted to represent a continental collision. During the Late Cambrian-Early Ordovician an extensional episode occurred in the central-southern Iberian Massif and was also observed in other areas of the Variscan Orogen. It led to mantle upwelling and to the development of an aborted intracratonic rift located at the Ossa-Morena/Central Iberian zone boundary and to the opening of the Rheic Ocean to the south of the area studied in present coordinates (i.e., between the Ossa-Morena and South Portuguese Zones). This event has been dated at ca. 477 Ma and was responsible for the melting of deep ancient mafic crust and mantle with formation of bimodal magmatism in an intra-plate setting, as indicated by the protoliths of the protomylonitic felsic dykes with trondhjemitic composition and of the garnet amphibolite. Subsequent Variscan metamorphism took place under amphibolite facies conditions (P = 4-5.5 kbar; T = 600-625 °C) at lower P-T conditions than the Cadomian

Population structure of Cicada barbara Stål (Hemiptera, Cicadoidea) from the Iberian Peninsula and Morocco based on mitochondrial DNA analysis.

PubMed

Pinto-Juma, G A; Quartau, J A; Bruford, M W

2008-02-01

We assess the genetic history and population structure of Cicada barbara in Morocco and the Iberian Peninsula, based on analysis of the mitochondrial cytochrome b gene. The divergence between Morocco and the Iberian Peninsula populations was strongly corroborated by the molecular data, suggesting genetically isolated populations with a low level of gene flow. The Ceuta population from Spanish North Africa was more similar to the Iberian populations than the surrounding Moroccan populations, suggesting that the Strait of Gibraltar has not been acting as a strict barrier to dispersal while the Rif Mountains have. The Iberian Peninsula specimens showed a signature of demographic expansion before that which occurred in Morocco, but some of the assumptions related to the demographic parameters should be considered with caution due to the small genetic variation found. The high haplotype diversity found in Morocco implies higher demographic stability than in the Iberian Peninsula populations. These results do not, however, suggest a Moroccan origin for Iberian cicadas; but the most northwest region in Africa, such as Ceuta, might have acted as a southern refuge for Iberian cicadas during the most severe climatic conditions, from where they could expand north when climate improved. The separation of two subspecies within C. barbara (C. barbara lusitanica and C. barbara barbara) finds support with these results.

Genome data from a sixteenth century pig illuminate modern breed relationships

PubMed Central

Ramírez, O; Burgos-Paz, W; Casas, E; Ballester, M; Bianco, E; Olalde, I; Santpere, G; Novella, V; Gut, M; Lalueza-Fox, C; Saña, M; Pérez-Enciso, M

2015-01-01

Ancient DNA (aDNA) provides direct evidence of historical events that have modeled the genome of modern individuals. In livestock, resolving the differences between the effects of initial domestication and of subsequent modern breeding is not straight forward without aDNA data. Here, we have obtained shotgun genome sequence data from a sixteenth century pig from Northeastern Spain (Montsoriu castle), the ancient pig was obtained from an extremely well-preserved and diverse assemblage. In addition, we provide the sequence of three new modern genomes from an Iberian pig, Spanish wild boar and a Guatemalan Creole pig. Comparison with both mitochondrial and autosomal genome data shows that the ancient pig is closely related to extant Iberian pigs and to European wild boar. Although the ancient sample was clearly domestic, admixture with wild boar also occurred, according to the D-statistics. The close relationship between Iberian, European wild boar and the ancient pig confirms that Asian introgression in modern Iberian pigs has not existed or has been negligible. In contrast, the Guatemalan Creole pig clusters apart from the Iberian pig genome, likely due to introgression from international breeds. PMID:25204303

Iberian Odonata distribution: data of the BOS Arthropod Collection (University of Oviedo, Spain)

PubMed Central

Torralba-Burrial, Antonio; Ocharan, Francisco J.

2013-01-01

Abstract Odonata are represented from the Iberian Peninsula by 79 species. However, there exists a significant gap in accessible knowledge about these species,especially regarding their distribution. This data paper describes the specimen-based Odonata data of the Arthropod Collection of the Department of Biología de Organismos y Sistemas (BOS), University of Oviedo, Spain. The specimens were mainly collected from the Iberian Peninsula (98.63% of the data records), especially the northern region. The earliest specimen deposited in the collection dates back to 1950, while the 1980’s and 2000’s are the best-represented time periods. Between 1950 and 2009, 16, 604 Odonata specimens were deposited and are documented in the dataset. Approximately 20% of the specimens belong to the families Coenagrionidae and Calopterygidae. Specimens include the holotype and paratypes of the Iberian subspecies Calopteryx haemorrhoidalis asturica Ocharan, 1983 and Sympetrum vulgatum ibericum Ocharan, 1985. The complete dataset is also provided in Darwin Core Archive format. PMID:23794917

Iberian Odonata distribution: data of the BOS Arthropod Collection (University of Oviedo, Spain).

PubMed

Torralba-Burrial, Antonio; Ocharan, Francisco J

2013-01-01

Odonata are represented from the Iberian Peninsula by 79 species. However, there exists a significant gap in accessible knowledge about these species,especially regarding their distribution. This data paper describes the specimen-based Odonata data of the Arthropod Collection of the Department of Biología de Organismos y Sistemas (BOS), University of Oviedo, Spain. The specimens were mainly collected from the Iberian Peninsula (98.63% of the data records), especially the northern region. The earliest specimen deposited in the collection dates back to 1950, while the 1980's and 2000's are the best-represented time periods. Between 1950 and 2009, 16, 604 Odonata specimens were deposited and are documented in the dataset. Approximately 20% of the specimens belong to the families Coenagrionidae and Calopterygidae. Specimens include the holotype and paratypes of the Iberian subspecies Calopteryx haemorrhoidalis asturica Ocharan, 1983 and Sympetrum vulgatum ibericum Ocharan, 1985. The complete dataset is also provided in Darwin Core Archive format.

Comparability of fish-based ecological quality assessments for geographically distinct Iberian regions.

PubMed

Segurado, P; Caiola, N; Pont, D; Oliveira, J M; Delaigue, O; Ferreira, M T

2014-04-01

In this work we compare two Iberian and a pan-European fish-based methods to assess ecological quality in rivers: the Fish-based Index of Biotic Integrity for Portuguese Wadeable Streams (F-IBIP), the Mediterranean Index of Biotic Integrity (IBIMED) and the pan-European Fish Index (EFI+). The results presented herein were developed in the context of the 2nd phase of the Intercalibration Exercise (IC), as required by the Water Frame Directive (WFD). The IC is aimed at ensuring comparability of the quality boundaries among the different WFD assessment methods developed by the Member States for each biological quality element. Although the two national assessment methods were developed for very distinct regions of Iberia (Western and Eastern Iberian Peninsula) they share the same methodological background: both are type-specific and guild-based multimetric indices. EFI+ is a multimetric guild-based model, but it is site-specific and uses a predictive modelling approach. The three indices were computed for all sites included in the Iberian Intercalibration database to allow the direct comparison, by means of linear regressions, of the resulting three quality values per site. The quality boundary harmonization between the two Iberian methods was only possible through an indirect comparison between the two indices, using EFI+ as a common metric. The three indices were also shown to be responsive to a common set of human induced pressures. This study highlights the need to develop general assessment methods adapted to wide geographical ranges with high species turnover to help intercalibrating assessment methods tailored for geographically more restricted regions. © 2013.

Feline Leukemia Virus and Other Pathogens as Important Threats to the Survival of the Critically Endangered Iberian Lynx (Lynx pardinus)

PubMed Central

Meli, Marina L.; Cattori, Valentino; Martínez, Fernando; López, Guillermo; Vargas, Astrid; Simón, Miguel A.; Zorrilla, Irene; Muñoz, Alvaro; Palomares, Francisco; López-Bao, Jose V.; Pastor, Josep; Tandon, Ravi; Willi, Barbara; Hofmann-Lehmann, Regina; Lutz, Hans

2009-01-01

Background The Iberian lynx (Lynx pardinus) is considered the most endangered felid species in the world. In order to save this species, the Spanish authorities implemented a captive breeding program recruiting lynxes from the wild. In this context, a retrospective survey on prevalence of selected feline pathogens in free-ranging lynxes was initiated. Methodology/ Principal Findings We systematically analyzed the prevalence and importance of seven viral, one protozoan (Cytauxzoon felis), and several bacterial (e.g., hemotropic mycoplasma) infections in 77 of approximately 200 remaining free-ranging Iberian lynxes of the Doñana and Sierra Morena areas, in Southern Spain, between 2003 and 2007. With the exception of feline immunodeficiency virus (FIV), evidence of infection by all tested feline pathogens was found in Iberian lynxes. Fourteen lynxes were feline leukemia virus (FeLV) provirus-positive; eleven of these were antigenemic (FeLV p27 positive). All 14 animals tested negative for other viral infections. During a six-month period in 2007, six of the provirus-positive antigenemic lynxes died. Infection with FeLV but not with other infectious agents was associated with mortality (p<0.001). Sequencing of the FeLV surface glycoprotein gene revealed a common origin for ten of the eleven samples. The ten sequences were closely related to FeLV-A/61E, originally isolated from cats in the USA. Endogenous FeLV sequences were not detected. Conclusions/Significance It was concluded that the FeLV infection most likely originated from domestic cats invading the lynx's habitats. Data available regarding the time frame, co-infections, and outcome of FeLV-infections suggest that, in contrast to the domestic cat, the FeLV strain affecting the lynxes in 2007 is highly virulent to this species. Our data argue strongly for vaccination of lynxes and domestic cats in and around lynx's habitats in order to prevent further spread of the virus as well as reduction the domestic cat

Ungulate reproductive parameters track satellite observations of plant phenology across latitude and climatological regimes

USGS Publications Warehouse

Stoner, David; Sexton, Joseph O.; Nagol, Jyoteshwar; Bernales, Heather H.; Edwards, Thomas C.

2016-01-01

The effect of climatically-driven plant phenology on mammalian reproduction is one key to predicting species-specific demographic responses to climate change. Large ungulates face their greatest energetic demands from the later stages of pregnancy through weaning, and so in seasonal environments parturition dates should match periods of high primary productivity. Interannual variation in weather influences the quality and timing of forage availability, which can influence neonatal survival. Here, we evaluated macro-scale patterns in reproductive performance of a widely distributed ungulate (mule deer, Odocoileus hemionus) across contrasting climatological regimes using satellite-derived indices of primary productivity and plant phenology over eight degrees of latitude (890 km) in the American Southwest. The dataset comprised > 180,000 animal observations taken from 54 populations over eight years (2004–2011). Regionally, both the start and peak of growing season (“Start” and “Peak”, respectively) are negatively and significantly correlated with latitude, an unusual pattern stemming from a change in the dominance of spring snowmelt in the north to the influence of the North American Monsoon in the south. Corresponding to the timing and variation in both the Start and Peak, mule deer reproduction was latest, lowest, and most variable at lower latitudes where plant phenology is timed to the onset of monsoonal moisture. Parturition dates closely tracked the growing season across space, lagging behind the Start and preceding the Peak by 27 and 23 days, respectively. Mean juvenile production increased, and variation decreased, with increasing latitude. Temporally, juvenile production was best predicted by primary productivity during summer, which encompassed late pregnancy, parturition, and early lactation. Our findings offer a parsimonious explanation of two key reproductive parameters in ungulate demography, timing of parturition and mean annual production

Ungulate Reproductive Parameters Track Satellite Observations of Plant Phenology across Latitude and Climatological Regimes

PubMed Central

Stoner, David C.; Sexton, Joseph O.; Nagol, Jyoteshwar; Bernales, Heather H.; Edwards, Thomas C.

2016-01-01

The effect of climatically-driven plant phenology on mammalian reproduction is one key to predicting species-specific demographic responses to climate change. Large ungulates face their greatest energetic demands from the later stages of pregnancy through weaning, and so in seasonal environments parturition dates should match periods of high primary productivity. Interannual variation in weather influences the quality and timing of forage availability, which can influence neonatal survival. Here, we evaluated macro-scale patterns in reproductive performance of a widely distributed ungulate (mule deer, Odocoileus hemionus) across contrasting climatological regimes using satellite-derived indices of primary productivity and plant phenology over eight degrees of latitude (890 km) in the American Southwest. The dataset comprised > 180,000 animal observations taken from 54 populations over eight years (2004–2011). Regionally, both the start and peak of growing season (“Start” and “Peak”, respectively) are negatively and significantly correlated with latitude, an unusual pattern stemming from a change in the dominance of spring snowmelt in the north to the influence of the North American Monsoon in the south. Corresponding to the timing and variation in both the Start and Peak, mule deer reproduction was latest, lowest, and most variable at lower latitudes where plant phenology is timed to the onset of monsoonal moisture. Parturition dates closely tracked the growing season across space, lagging behind the Start and preceding the Peak by 27 and 23 days, respectively. Mean juvenile production increased, and variation decreased, with increasing latitude. Temporally, juvenile production was best predicted by primary productivity during summer, which encompassed late pregnancy, parturition, and early lactation. Our findings offer a parsimonious explanation of two key reproductive parameters in ungulate demography, timing of parturition and mean annual production

Patterns of Exposure of Iberian Wolves (Canis lupus) to Canine Viruses in Human-Dominated Landscapes.

PubMed

Millán, Javier; López-Bao, José Vicente; García, Emilio J; Oleaga, Álvaro; Llaneza, Luis; Palacios, Vicente; de la Torre, Ana; Rodríguez, Alejandro; Dubovi, Edward J; Esperón, Fernando

2016-03-01

Wildlife inhabiting human-dominated landscapes is at risk of pathogen spill-over from domestic species. With the aim of gaining knowledge in the dynamics of viral infections in Iberian wolves (Canis lupus) living in anthropized landscapes of northern Spain, we analysed between 2010 and 2013 the samples of 54 wolves by serology and polymerase chain reaction (PCR) for exposure to four pathogenic canine viruses: canine distemper virus (CDV), canine parvovirus-2 (CPV), canine adenovirus 1 and 2 (CAV-1 and CAV-2) and canine herpesvirus. Overall, 76% of the studied wolves presented evidence of exposure to CPV (96% by HI, 66% by PCR) and 75% to CAV (75% by virus neutralization (VN), 76% by PCR, of which 70% CAV-1 and 6% CAV-2). This represents the first detection of CAV-2 infection in a wild carnivore. CPV/CAV-1 co-infection occurred in 51% of the wolves. The probability of wolf exposure to CPV was positively and significantly correlated with farm density in a buffer zone around the place where the wolf was found, indicating that rural dogs might be the origin of CPV infecting wolves. CPV and CAV-1 appear to be enzootic in the Iberian wolf population, which is supported by the absence of seasonal and inter-annual variations in the proportion of positive samples detected. However, while CPV may depend on periodical introductions by dogs, CAV-1 may be maintained within the wolf population. All wolves were negative for exposure to CDV (by VN and PCR) and CHV (by PCR). The absence of acquired immunity against CDV in this population may predispose it to an elevated rate of mortality in the event of a distemper spill-over via dogs.

Ascent ability of brown trout, Salmo trutta, and two Iberian cyprinids − Iberian barbel, Luciobarbus bocagei, and northern straight-mouth nase, Pseudochondrostoma duriense − in a vertical slot fishway

USGS Publications Warehouse

Sanz-Ronda, Fco. Javier; Bravo-Cordoba, F.J.; Fuentes-Perez, J.F.; Castro-Santos, Theodore R.

2016-01-01

Passage performance of brown trout (Salmo trutta), Iberian barbel (Luciobarbus bocagei), and northern straight-mouth nase (Pseudochondrostoma duriense) was investigated in a vertical slot fishway in the Porma River (Duero River basin, Spain) using PIT telemetry. We analysed the effects of different fishway discharges on motivation and passage success. Both cyprinid species ascended the fishway easily, performing better than the trout despite their theoretically weaker swimming performance. Fishway discharge affected fish motivation although it did not clearly influence passage success. Observed results can guide design and operation criteria of vertical slot fishways for native Iberian fish.

Femoral condyle curvature is correlated with knee walking kinematics in ungulates.

PubMed

Sylvester, Adam D

2015-12-01

The knee has been the focus of many studies linking mammalian postcranial form with locomotor behaviors and animal ecology. A more difficult task has been linking joint morphology with joint kinematics during locomotor tasks. Joint curvature represents one opportunity to link postcranial morphology with walking kinematics because joint curvature develops in response to mechanical loading. As an initial examination of mammalian knee joint curvature, the curvature of the medial femoral condyle was measured on femora representing 11 ungulate species. The position of a region of low curvature was measured using a metric termed the "angle to low curvature". This low-curvature region is important because it provides the greatest contact area between femoral and tibial condyles. Kinematic knee angles during walking were derived from the literature and kinematic knee angles across the gait cycle were correlated with angle to low curvature values. The highest correlation between kinematic knee angle and the angle to low curvature metric occurred at 20% of the walking gait cycle. This early portion of the walking gait cycle is associated with a peak in the vertical ground reaction force for some mammals. The chondral modeling theory predicts that frequent and heavy loading of particular regions of a joint surface during ontogeny will result in these regions being flatter than the surrounding joint surface. The locations of flatter regions of the femoral condyles of ungulates, and their association with knee angles used during the early stance phase of walking provides support for the chondral modeling theory. © 2015 Wiley Periodicals, Inc.

A reappraisal of the Middle Triassic chirotheriid Chirotherium ibericus Navás, 1906 (Iberian Range NE Spain), with comments on the Triassic tetrapod track biochronology of the Iberian Peninsula

PubMed Central

Castanera, Diego; Gasca, José Manuel; Canudo, José Ignacio

2015-01-01

Triassic vertebrate tracks are known from the beginning of the 19th century and have a worldwide distribution. Several Triassic track ichnoassemblages and ichnotaxa have a restricted stratigraphic range and are useful in biochronology and biostratigraphy. The record of Triassic tracks in the Iberian Peninsula has gone almost unnoticed although more than 25 localities have been described since 1897. In one of these localities, the naturalist Longinos Navás described the ichnotaxon Chirotherium ibericus in 1906.The vertebrate tracks are in two sandy slabs from the Anisian (Middle Triassic) of the Moncayo massif (Zaragoza, Spain). In a recent revision, new, previously undescribed vertebrate tracks have been identified. The tracks considered to be C. ibericus as well as other tracks with the same morphology from both slabs have been classified as Chirotherium barthii. The rest of the tracks have been assigned to Chirotheriidae indet., Rhynchosauroides isp. and undetermined material. This new identification of C. barthii at the Navás site adds new data to the Iberian record of this ichnotaxon, which is characterized by the small size of the tracks when compared with the main occurrences of this ichnotaxon elsewhere. As at the Navás tracksite, the Anisian C. barthii-Rhynchosauroides ichnoassemblage has been found in other coeval localities in Iberia and worldwide. This ichnoassemblage belongs to the upper Olenekian-lower Anisian interval according to previous biochronological proposals. Analysis of the Triassic Iberian record of tetrapod tracks is uneven in terms of abundance over time. From the earliest Triassic to the latest Lower Triassic the record is very scarce, with Rhynchosauroides being the only known ichnotaxon. Rhynchosauroides covers a wide temporal range and gives poor information for biochronology. The record from the uppermost Lower Triassic to the Middle Triassic is abundant. The highest ichnodiversity has been reported for the Anisian with an

Characteristics of storms that contribute to extreme precipitation events over the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Trigo, Ricardo; Ramos, Alexandre M.; Ordoñez, Paulina; Liberato, Margarida L. R.; Trigo, Isabel F.

2014-05-01

Floods correspond to one of the most deadly natural disasters in the Iberian Peninsula during the last century. Quite often these floods are associated to intense low pressure systems with an Atlantic origin. In recent years a number of episodes have been evaluated on a case-by-case approach, with a clear focus on extreme events, thus lacking a systematic assessment. In this study we focus on the characteristics of storms for the extended winter season (October to March) that are responsible for the most extreme rainfall events over large areas of the Iberian Peninsula. An objective method for ranking daily precipitation events during the extended winter is used based on the most comprehensive database of high resolution (0.2º latitude by 0.2º longitude) gridded daily precipitation dataset available for the Iberian Peninsula. The magnitude of an event is obtained after considering the total area affected as well as its intensity in every grid point (taking into account the daily normalised departure from climatology). Different precipitation rankings are studied considering the entire Iberian Peninsula, Portugal and also the six largest river basins in the Iberian Peninsula (Duero, Ebro, Tagus, Minho, Guadiana and Guadalquivir). Using an objective cyclone detecting and tracking scheme [Trigo, 2006] the storm track and characteristics of the cyclones were obtained using the ERA-Interim reanalyses for the 1979-2008 period. The spatial distribution of extratropical cyclone positions when the precipitation extremes occur will be analysed over the considered sub-domains (Iberia, Portugal, major river basins). In addition, we distinguish the different cyclone characteristics (lifetime, direction, minimum pressure, position, velocity, vorticity and radius) with significant impacts in precipitation over the different domains in the Iberian Peninsula. This work was partially supported by FEDER (Fundo Europeu de Desenvolvimento Regional) funds through the COMPETE (Programa

Strontium isotope investigation of ungulate movement patterns on the Pleistocene Paleo-Agulhas Plain of the Greater Cape Floristic Region, South Africa

NASA Astrophysics Data System (ADS)

Copeland, Sandi R.; Cawthra, Hayley C.; Fisher, Erich C.; Lee-Thorp, Julia A.; Cowling, Richard M.; le Roux, Petrus J.; Hodgkins, Jamie; Marean, Curtis W.

2016-06-01

Middle Stone Age sites located within the Greater Cape Floristic Region on the South African southern coast have material culture with early evidence for key modern human behaviors such as projectile weaponry, large animal hunting, and symbolic behavior. In order to interpret how and why these changes evolved, it is necessary to understand their ecological context as it has direct relevance to foraging behavior. During periods of lowered sea level, a largely flat and vast expanse of land existed south of the modern coastline, but it is now submerged by higher sea levels. This exposed area, the Paleo-Agulhas Plain, likely created an ecological context unlike anything in the region today, as evidenced by fossil assemblages dominated by migratory ungulates. One hypothesis is that the Paleo-Agulhas Plain supported a migration ecosystem of large grazers driven by summer rainfall, producing palatable forage during summer in the east, and winter rainfall, producing palatable forage during winter in the west. Alternatively, ungulates may have been moving from the coastal plain in the south to the interior north of the Cape Fold Mountains, as observed for elephants in historic times. In this study, we assess ungulate movement patterns with inter- and intra-tooth enamel samples for strontium isotopes in fossil fauna from Pinnacle Point sites PP13B and PP30. To accomplish our goals we created a bioavailable 87Sr/86Sr isoscape for the region by collecting plants at 171 sampling sites and developing a geospatial model. The strontium isotope results indicate that ungulates spent most of their time on the Paleo-Agulhas Plain and avoided dissected plain, foothill, and mountain habitats located more than about 15 km north of the modern coastline. The results clearly exclude a north-south (coastal-interior) movement or migration pattern, and cannot falsify the east-west movements hypothesized in the south coast migration ecosystem hypothesis.

Native species regeneration following ungulate exclusion and nonnative grass removal in a remnant Hawaiian dry forest

Treesearch

Jarrod M. Thaxton; T. Colleen Cole; Susan Cordell; Robert J. Cabin; Darren R. Sandquist; Creighton M. Litton

2010-01-01

Hawaiian lowland dry forests have been reduced by >90% since first human contact. Restoration has focused on protection from fire and ungulates, and removal of invasive grasses as ways to stimulate native forest regeneration. Despite these efforts, natural regeneration of native plants has been infrequent. To assess effects of previous restoration treatments on...

Latest Early Pleistocene remains of Lynx pardinus (Carnivora, Felidae) from the Iberian Peninsula: Taxonomy and evolutionary implications

NASA Astrophysics Data System (ADS)

Boscaini, Alberto; Alba, David M.; Beltrán, Juan F.; Moyà-Solà, Salvador; Madurell-Malapeira, Joan

2016-07-01

The Iberian lynx (Lynx pardinus) is a critically endangered felid that, during the last fifty years, has been subject to an intensive conservation program in an attempt to save it from extinction. This species is first recorded at ca. 1.7-1.6 Ma (late Villafranchian, late Early Pleistocene) in NE Iberian Peninsula, roughly coinciding with the large faunal turnover that occurred around the middle to late Villafranchian boundary. Here we describe the largest collection of L. pardinus remains available to date from the Iberian late Early Pleistocene (Epivillafranchian), including localities from the Vallparadís Section (Vallès-Penedès Basin, NE Iberian Peninsula) and Cueva Victoria (Cartagena, SE Iberian Peninsula). The morphology and biometry of the studied material attests to the widespread occurrence of L. pardinus in the Mediterranean coast of the Iberian Peninsula since the latest Early Pleistocene, i.e., about 0.5 million years earlier than it was generally accepted (i.e., at the beginning of the Middle Pleistocene). Based on the features observed in the large sample studied in this paper, we conclude that Lynx spelaeus is a junior synonym of L. pardinus and further propose to assign all the Epivillafranchian and younger fossil lynxes from SW Europe to the extant species L. pardinus. Due to the arrival of the Eurasian lynx (Lynx lynx) into Europe at the beginning of the Late Pleistocene, the attribution of specimens younger than MIS 5e to either this species or L. pardinus solely on morphological grounds has proven equivocal. Here we discuss the main diagnostic features of both species of European lynxes and further review their evolutionary history and paleobiogeography throughout the Pleistocene.

Green‐wave surfing increases fat gain in a migratory ungulate

USGS Publications Warehouse

Middleton, Arthur D.; Merkle, Jerod A.; McWhirter, Douglas E.; Cook, John G.; Cook, Rachel C.; White, P.J.; Kauffman, Matthew J.

2018-01-01

Each spring, migratory herbivores around the world track or ‘surf’ green waves of newly emergent vegetation to distant summer or wet‐season ranges. This foraging tactic may help explain the great abundance of migratory herbivores on many seasonal landscapes. However, the underlying fitness benefits of this life‐history strategy remain poorly understood. A fundamental prediction of the green‐wave hypothesis is that migratory herbivores obtain fitness benefits from surfing waves of newly emergent vegetation more closely than their resident counterparts. Here we evaluate whether this behavior increases body‐fat levels – a critically important correlate of reproduction and survival for most ungulates – in elk Cervus elaphus of the Greater Yellowstone Ecosystem. Using satellite imagery and GPS tracking data, we found evidence that migrants (n = 23) indeed surfed the green wave, occupying sites 12.7 days closer to peak green‐up than residents (n = 16). Importantly, individual variation in surfing may help account for up to 6 kg of variation in autumn body‐fat levels. Our findings point to a pathway for anthropogenic changes to the green wave (e.g. climate change) or migrants’ ability to surf it (e.g. development) to impact migratory populations. To explore this possibility, we evaluated potential population‐level consequences of constrained surfing with a heuristic model. If green‐wave surfing deteriorates by 5–15 days from observed, our model predicts up to a 20% decrease in pregnancy rates, a 2.5% decrease in population growth, and a 30% decrease in abundance over 50 years. By linking green‐wave surfing to fitness and illustrating potential effects on population growth, our study provides new insights into the evolution of migratory behavior and the prospects for the persistence of migratory ungulate populations in a changing world.

Impact of ungulate exclusion on understorey succession in relation to forest management in the Intermountain Western United States

Treesearch

Burak K. Pekin; Bryan A. Endress; Michael J. Wisdom; Bridgett J. Naylor; Catherine G. Parks

2014-01-01

Questions: Do successional trajectories in plant diversity, heterogeneity and dominance respond differently to ungulate exclusion in unmanaged forests vs managed forests that are thinned and burned? Is vegetation in recently thinned and burned standsmore sensitive to changes in the grazing regime? Location:...

Woody debris in north Iberian streams: influence of geomorphology, vegetation, and management.

PubMed

Diez, J R; Elosegi, A; Pozo, J

2001-11-01

The effect of stream geomorphology, maturity, and management of riparian forests on abundance, role, and mobility of wood was evaluated in 20 contrasting reaches in the Agüera stream catchment (northern Iberian Peninsula). During 1 year the volume of woody debris exceeding 1 cm in diameter was measured in all reaches. All large woody debris (phi > 5 cm) pieces were tagged, their positions mapped, and their subsequent changes noted. Volume of woody debris was in general low and ranged from 40 to 22,000 cm3 m-2; the abundance of debris dams ranged from 0 to 5.5 per 100 m of channel. Wood was especially rare and unstable in downstream reaches, or under harvested forests (both natural or plantations). Results stress that woody debris in north Iberian streams has been severely reduced by forestry and log removal. Because of the important influence of woody debris on structure and function of stream systems, this reduction has likely impacted stream communities. Therefore, efforts to restore north Iberian streams should include in-channel and riparian management practices that promote greater abundance and stability of large woody debris whenever possible.

Genetic structure, relationships and admixture with wild relatives in native pig breeds from Iberia and its islands.

PubMed

Gama, Luis T; Martínez, Amparo M; Carolino, Inês; Landi, Vincenzo; Delgado, Juan V; Vicente, Antonio A; Vega-Pla, José L; Cortés, Oscar; Sousa, Conceição O

2013-06-14

Native pig breeds in the Iberian Peninsula are broadly classified as belonging to either the Celtic or the Mediterranean breed groups, but there are other local populations that do not fit into any of these groups. Most of the native pig breeds in Iberia are in danger of extinction, and the assessment of their genetic diversity and population structure, relationships and possible admixture between breeds, and the appraisal of conservation alternatives are crucial to adopt appropriate management strategies. A panel of 24 microsatellite markers was used to genotype 844 animals representing the 17 most important native swine breeds and wild populations existing in Portugal and Spain and various statistical tools were applied to analyze the results. Genetic diversity was high in the breeds studied, with an overall mean of 13.6 alleles per locus and an average expected heterozygosity of 0.80. Signs of genetic bottlenecks were observed in breeds with a small census size, and population substructure was present in some of the breeds with larger census sizes. Variability among breeds accounted for about 20% of the total genetic diversity, and was explained mostly by differences among the Celtic, Mediterranean and Basque breed groups, rather than by differences between domestic and wild pigs. Breeds clustered closely according to group, and proximity was detected between wild pigs and the Mediterranean cluster of breeds. Most breeds had their own structure and identity, with very little evidence of admixture, except for the Retinto and Entrepelado varieties of the Mediterranean group, which are very similar. Genetic influence of the identified breed clusters extends beyond the specific geographical areas across borders throughout the Iberian Peninsula, with a very sharp transition from one breed group to another. Analysis of conservation priorities confirms that the ranking of a breed for conservation depends on the emphasis placed on its contribution to the between- and

The gastropod Phorcus sauciatus (Koch, 1845) along the north-west Iberian Peninsula: filling historical gaps

NASA Astrophysics Data System (ADS)

Rubal, Marcos; Veiga, Puri; Moreira, Juan; Sousa-Pinto, Isabel

2014-03-01

The intertidal gastropod Phorcus sauciatus is a subtropical grazer that reaches its northern boundary in the Iberian Peninsula. Distribution of P. sauciatus along the Iberian Peninsula shows, however, gaps in its distribution. The present study was aimed at detecting possible recent changes on the population structure and distribution of P. sauciatus along the north-west Atlantic coast of the Iberian Peninsula. To achieve this aim, we adopted a qualitative sampling design to explore the presence of P. sauciatus along a region within its historical gap of distribution (north Portuguese coast). In addition, a quantitative sampling design was adopted to test hypotheses about the abundance and size structure of P. sauciatus populations among regions with different historical records of its abundance and among shores with different exposure. Results showed that P. sauciatus was present along the north Portuguese coast. However, the abundance and size structure of the newly settled populations were significantly different to those of the historically recorded populations. Moreover, P. sauciatus was able to establish populations at sheltered shores. Considering these results, we propose models for the distribution of P. sauciatus along the Iberian Peninsula, based on effects of sea surface temperature, and to explain the size-frequency of their populations based on their density.

50 CFR 14.142 - Primary enclosures.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Wild Mammals and Birds to the United States Specifications for Elephants and Ungulates § 14.142 Primary... shall be located on the upper one-half of the primary enclosure. (b) No more than one elephant or... case of land or sea transport, a pair of juvenile elephants or ungulates or other pairs that have been...

50 CFR 14.142 - Primary enclosures.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Wild Mammals and Birds to the United States Specifications for Elephants and Ungulates § 14.142 Primary... shall be located on the upper one-half of the primary enclosure. (b) No more than one elephant or... case of land or sea transport, a pair of juvenile elephants or ungulates or other pairs that have been...

50 CFR 14.142 - Primary enclosures.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Wild Mammals and Birds to the United States Specifications for Elephants and Ungulates § 14.142 Primary... shall be located on the upper one-half of the primary enclosure. (b) No more than one elephant or... case of land or sea transport, a pair of juvenile elephants or ungulates or other pairs that have been...

50 CFR 14.142 - Primary enclosures.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Wild Mammals and Birds to the United States Specifications for Elephants and Ungulates § 14.142 Primary... shall be located on the upper one-half of the primary enclosure. (b) No more than one elephant or... case of land or sea transport, a pair of juvenile elephants or ungulates or other pairs that have been...

50 CFR 14.142 - Primary enclosures.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Wild Mammals and Birds to the United States Specifications for Elephants and Ungulates § 14.142 Primary... shall be located on the upper one-half of the primary enclosure. (b) No more than one elephant or... case of land or sea transport, a pair of juvenile elephants or ungulates or other pairs that have been...

Postepizootic Persistence of Asymptomatic Mycoplasma conjunctivae Infection in Iberian Ibex

PubMed Central

Cabezón, Oscar; Granados, José Enrique; Frey, Joachim; Serrano, Emmanuel; Velarde, Roser; Cano-Manuel, Francisco Javier; Mentaberre, Gregorio; Ráez-Bravo, Arián; Fandos, Paulino

2017-01-01

ABSTRACT The susceptibility of the Iberian ibex (Capra pyrenaica) to Mycoplasma conjunctivae ocular infection and the changes in their interaction over time were studied in terms of clinical outcome, molecular detection, and IgG immune response in a captive population that underwent a severe infectious keratoconjunctivitis (IKC) outbreak. Mycoplasma conjunctivae was detected in the Iberian ibex, coinciding with the IKC outbreak. Its prevalence had a decreasing trend in 2013 that was consistent with the clinical resolution (August, 35.4%; September, 8.7%; November, 4.3%). Infections without clinical outcome were, however, still detected in the last handling in November. Sequencing and cluster analyses of the M. conjunctivae strains found 1 year later in the ibex population confirmed the persistence of the same strain lineage that caused the IKC outbreak but with a high prevalence (75.3%) of mostly asymptomatic infections and with lower DNA load of M. conjunctivae in the eyes (mean quantitative PCR [qPCR] cycle threshold [CT], 36.1 versus 20.3 in severe IKC). Significant age-related differences of M. conjunctivae prevalence were observed only under IKC epizootic conditions. No substantial effect of systemic IgG on M. conjunctivae DNA in the eye was evidenced with a linear mixed-models selection, which indicated that systemic IgG does not necessarily drive the resolution of M. conjunctivae infection and does not explain the epidemiological changes observed. The results show how both epidemiological scenarios, i.e., severe IKC outbreak and mostly asymptomatic infections, can consecutively occur by entailing mycoplasma persistence. IMPORTANCE Mycoplasma infections are reported in a wide range of epidemiological scenarios that involve severe disease to asymptomatic infections. This study allows a better understanding of the transition between two different Mycoplasma conjunctivae epidemiological scenarios described in wild host populations and highlights the ability of M

Influence of physicochemical characteristics and high pressure processing on the volatile fraction of Iberian dry-cured ham.

PubMed

Martínez-Onandi, Nerea; Rivas-Cañedo, Ana; Ávila, Marta; Garde, Sonia; Nuñez, Manuel; Picon, Antonia

2017-09-01

The volatile fraction of 30 Iberian dry-cured hams of different physicochemical characteristics and the effect of high pressure processing (HPP) at 600MPa on volatile compounds were investigated. According to the analysis of variance carried out on the levels of 122 volatile compounds, intramuscular fat content influenced the levels of 8 benzene compounds, 5 carboxylic acids, 2 ketones, 2 furanones, 1 alcohol, 1 aldehyde and 1 sulfur compound, salt concentration influenced the levels of 1 aldehyde and 1 ketone, salt-in-lean ratio had no effect on volatile compounds, and water activity influenced the levels of 3 sulfur compounds, 1 alcohol and 1 aldehyde. HPP-treated samples of Iberian ham had higher levels of 4 compounds and lower levels of 31 compounds than untreated samples. A higher influence of HPP treatment on volatile compounds than physicochemical characteristics was observed for Iberian ham. Therefore, HPP treatment conditions should be optimized in order to diminish its possible effect on Iberian ham odor and aroma characteristics. Copyright © 2017 Elsevier Ltd. All rights reserved.

The role of ungulates in nowadays temperate forests. A response to Fløjgaard et al. (DOI:10.1111/gcb.14029).

PubMed

Boulanger, Vincent; Dupouey, Jean-Luc; Archaux, Frédéric; Badeau, Vincent; Baltzinger, Christophe; Chevalier, Richard; Corcket, Emmanuel; Dumas, Yann; Forgeard, Françoise; Mårell, Anders; Montpied, Pierre; Paillet, Yoan; Saïd, Sonia; Ulrich, Erwin

2018-06-01

In Boulanger et al. (2018), we investigated the effects of ungulates on forest plant diversity. By suggesting a revisit of our conclusions regarding ecosystem dynamics since the late Pleistocene, Fløjgaard et al. (2018) came to the conclusion that moderate grazing in forest should be a conservation target. Since major points of our paper were mis- or over- interpreted, we put the record straight on our study system and on the scope of our conclusions. Finally, we advocate for an assessment of the conservation issues of ungulates in forests not only regarding hypothetical and still debated states of past ecosystems but also considering timely challenges for forest ecosystems. © 2018 John Wiley & Sons Ltd.

Lithospheric strength across the ocean-continent transition in the NW of the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Martín-Velázquez, Silvia; Martín-González, Fidel

2014-05-01

The main objective of this work is to investigate the relation between the strength of the lithosphere and the observed pattern of seismicity across the ocean-continent transition in the NW margin of the Iberian Peninsula. The seismicity is diffuse in this intraplate area, far from the seismically active margin of the plate: the Eurasia-African plate boundary, where convergence occurs at a rate of 4-5mm/year. The earthquake epicentres are mainly limited to an E-W trending zone (onshore seismicity is more abundant than offshore), and most earthquakes occur at depths less than 30 km, however, offshore depths are up to 150 km). Moreover, one of the problems to unravel in this area is that the seismotectonic interpretations of the anomalous seismicity in the NW peninsular are contradictory. The temperature and strength profiles have been modelled in three domains along the non-volcanic rifted West Iberian Margin: 1) the oceanic lithosphere of the Iberian Abyssal Plain, 2) the oceanic lithosphere near the ocean-continent transition of the Galicia Bank, and 3) the continental lithosphere of the NW Iberian Massif. The average bathymetry and topography have been used to fit the thermal structures of the three types of lithospheres, given that the heat flow and heat production values show a varied range. The geotherms, together with the brittle and ductile rheological laws, have been used to calculate the strength envelopes in different stress regimes (compression, shear and tensile). The continental lithosphere-asthenosphere boundary is located at 123 km and several brittle-ductile transitions appear in the crust and the mantle. However, the oceanic lithospheres are thinner (110 km near the Galicia Bank and 87 km in the Iberian Abbysal Plain) and more simple (brittle behaviour in the crust and upper mantle). The earthquake distribution is best explained by lithospheres with dry compositions and shear or tensile stress regimes. These results are similar can be compared to

Tick- and fly-borne bacteria in ungulates: the prevalence of Anaplasma phagocytophilum, haemoplasmas and rickettsiae in water buffalo and deer species in Central Europe, Hungary.

PubMed

Hornok, Sándor; Sugár, László; Fernández de Mera, Isabel G; de la Fuente, José; Horváth, Gábor; Kovács, Tibor; Micsutka, Attila; Gönczi, Enikő; Flaisz, Barbara; Takács, Nóra; Farkas, Róbert; Meli, Marina L; Hofmann-Lehmann, Regina

2018-03-20

Hunting constitutes an important industry in Europe. However, data on the prevalence of vector-borne bacteria in large game animal species are lacking from several countries. Blood or spleen samples (239 and 270, respectively) were taken from red, fallow and roe deer, as well as from water buffaloes, mouflons and wild boars in Hungary, followed by DNA extraction and molecular analyses for Anaplasma phagocytophilum, haemoplasmas and rickettsiae. Based on blood samples, the prevalence rate of A. phagocytophilum infection was significantly higher in red deer (97.9%) than in fallow deer (72.7%) and roe deer (60%), and in all these compared to mouflons (6.3%). In addition, 39.2% of the spleen samples from wild boars were PCR positive for A. phagocytophilum, but none of the buffalos. Based on blood samples, the prevalence rates of both Mycoplasma wenyonii (Mw) and 'Candidatus M. haemobos' (CMh) infections were significantly higher in buffaloes (Mw: 91.2%; CMh: 73.3%) than in red deer (Mw: 64.6%; CMh: 45.8%), and in both of them compared to fallow deer (Mw: 30.3%; CMh: 9.1%) and roe deer (Mw: 20%; CMh: 1.5%). The prevalence of Mw and CMh infection significantly correlated with the body sizes of these hosts. Furthermore, Mw was significantly more prevalent than CMh in buffaloes, red and roe deer. Mycoplasma ovis was detected in mouflons, M. suis in wild boars, R. helvetica in one fallow deer and one mouflon, and an unidentified Rickettsia sp. in a fallow deer. Forest-dwelling game animal species were found to be important carriers of A. phagocytophilum. In contrast, animals grazing grassland (i.e. buffaloes) were less likely to get infected with this Ixodes ricinus-borne pathogen. Water buffaloes, deer species, mouflons and wild boars harbored haemoplasmas that may affect domestic ungulates. Evaluated animals with larger body size had significantly higher prevalence of infection with haemoplasmas compared to smaller deer species. The above host species rarely carried

The reactivation of the SW Iberian passive margin: a brief review

NASA Astrophysics Data System (ADS)

Duarte, Joao; Rosas, Filipe; Terrinha, Pedro; Schellart, Wouter; Almeida, Pedro; Gutscher, Marc-André; Riel, Nicolas; Ribeiro, António

2016-04-01

On the morning of the 1st of November of 1755 a major earthquake struck offshore the Southwest Iberian margin. This was the strongest earthquake ever felt in Western Europe. The shake, fire and tsunami devastated Lisbon, was felt as far as Finland and had a profound impact on the thinkers of that time, in particular on the Enlightenment philosophers such as Voltaire, Rousseau and Kant. The Great Lisbon Earthquake is considered by many as the event that marks the birth of modern geosciences; and made of this region one of the most well studied areas in the world. After the 1755 earthquake, Kant and others authors wrote several treaties dealing with the causes and dynamics of earthquakes and tsunamis and were close to identify some key elements of what we now call plate tectonics. More than two hundred years later, in the year of 1969, the region was struck by another major earthquake. This was precisely during the period in which the theory of plate tectonics was being built. Geoscientists like Fukao (1973), Purdy (1975) and Mackenzie (1977) immediately focused their attention in the area. They suggested that these events were related with "transient" subduction of Africa below Iberia, along the East-West Azores-Gibraltar plate boundary. Several years later, Ribeiro (1989) suggested that instead of Africa being subducted below Iberia, it was the West Iberian passive margin that was being reactivated, a process that may, in time, lead to the formation of a new subduction zone. In the turning of the millennium, a subducting slab was imaged bellow the Gibraltar Straits, a remanent of the Western Mediterranean arc system that according to Gutscher et al. (2002) was related with ongoing subduction. Recently, it was proposed that a causal link between the Gibraltar subduction system and the reactivation of the SW Iberian margin might exist. In addition, the large-scale Africa-Eurasia convergence is inducing compressive stresses along the West Iberian margin. The margin

The hygiene-sanitary control in the wild game meats.

PubMed

Giuggioli, Germana; Olivastri, Alberto; Pennisi, Luca; Paludi, Domenico; Ianieri, Adriana; Vergara, Alberto

2017-10-20

The use of game meat as a food source is currently a growing trend in our country. These products have strong and historic ties with cultural and culinary tradition, but are also appreciated for their sensory and nutritional characteristics. A major contributor to the supply of this type of product is hunting. Practiced since the dawn of time for survival, hunting has evolved into a recreational activity with substantial commercial interests. Of particular importance in this context is hunting of large ungulates. The progressive urbanization of the population has allowed for the re-establishment of bush and wooded areas that represent the ideal habitat of species such as the wild boar, whose numbers are increasing throughout the country. It is therefore clear that implementation of safety rules regarding the hunting and consumption of game meat needs to be urgently addressed. The understanding and application of rules isn't always easy since the health law is intertwined with that of hunting, and the decision- making power left to the different regions does not contribute to a uniform application throughout the country. The aim of this study was to examine the norms that regulate the use of large wild game meat intended for human consumption and their applicability in hunting activities. From the comparison of the data reported in the literature and our field experience the rules implementation and the problems are evaluated. Operational procedures are then proposed to simplify some of the most difficult aspects and fill in the gaps highlighted.

Fertilization capacity of cryopreserved Iberian ibex epididymal sperm in a heterologous in vitro fertilization assay.

PubMed

López-Saucedo, J; Santiago-Moreno, J; Fierro, R; Izquierdo, D; Coloma, M A; Catalá, M G; Jiménez, I; Paramio, M T

2015-02-01

In vitro fertilization (IVF) can be used to assess the fertilization capacity of sperm. Heterologous IVF may be useful when assessing that of wild animals as it is often difficult to obtain adequate numbers of naturally corresponding oocytes. The aim of the present study was to assess the fertilization capacity of frozen-thawed ibex epididymal spermatozoa via heterologous IVF involving the oocytes of prepubertal domestic goats. The effect on fertilization and embryo development of adding oestrous sheep serum (ESS) to the fertilization medium was also examined. Cumulus-oocyte complexes (COCs) were matured in TCM-199 for 24-27 h at 38.5°C in a 5% CO2 in air atmosphere. Frozen-thawed epididymal spermatozoa were selected by density gradient centrifugation. After maturation, the oocytes were co-incubated with spermatozoa in synthetic oviductal fluid (SOF) with different concentrations of ESS: SOF-C (0%), SOF-2 (2%) and SOF-20 (20%). At 17 h post-insemination (hpi), zygotes with one female and one male pronucleus (2PN) were categorised as normal; zygotes with 3PN were recorded as polyspermic, and oocytes with 1PN as asynchronous. Cleavage and blastocyst development were assessed at 48 and 168 hpi respectively. The percentage of zygotes with 2PN was higher in the SOF-2 than in the SOF-20 treatment group (27.7% versus 2.9% P < 0.05). The percentage of blastocysts formed with the SOF-C, SOF-2 and SOF-20 treatments were 1.1%, 7.5% and 0% respectively. These results show that the presence of 2% ESS achieves better results than the use of no serum or the standard 20% concentration. Heterologous IVF may be an effective method for predicting the fertilization capacity of ibex spermatozoa, and therefore perhaps that of other wild mountain ungulates.

Spatially explicit population modeling and the reintroduction of a native ungulate: Using HexSim to evaluate release alternatives

EPA Science Inventory

The tule elk (Cervus elaphus nannodes), a subspecies of ungulate endemic to central California, was nearly brought to extinction in the 19th century and is still extirpated from most of its natural range. As part of an ongoing restoration program, we evaluated a portion of its fo...

Use of filter papers to determine seroprevalence of Toxoplasma gondii among hunted ungulates in remote Peruvian Amazon.

PubMed

Aston, Emily J; Mayor, Pedro; Bowman, Dwight D; Mohammed, Hussni O; Liotta, Janice L; Kwok, Oliver; Dubey, J P

2014-04-01

Toxoplasmosis is a zoonosis caused by the protozoan Toxoplasma gondii, and it is found worldwide. To determine whether ungulates are reservoirs of T. gondii in an isolated and remote region of the northeastern Peruvian Amazon, antibodies to T. gondii were determined in 5 species of ungulates by the modified agglutination test (MAT). These animals were hunted by subsistence hunters along the Yavarí-Mirín River, in the northeastern Peruvian Amazon. Blood samples were collected by hunters on filter papers. For determination of T. gondii antibodies, blood was eluted from filter papers, and a titer of 1:25 was considered indicative of exposure to T. gondii. Antibodies to T. gondii were found in 26 (31.0%) peccaries (Pecari tajacu, Tayassu pecari), six (17.1%) brocket deer (Mazama americana, Mazama gouazoubira), and four (40.0%) lowland tapir (Tapirus terrestris). We also introduced a modification to the MAT protocol that allows the extraction of fluid samples from several types of laboratory-grade filter paper, thus enabling researchers to easily adapt their approaches to the materials presented to them.

Use of filter papers to determine seroprevalence of Toxoplasma gondii among hunted ungulates in remote Peruvian Amazon☆

PubMed Central

Aston, Emily J.; Mayor, Pedro; Bowman, Dwight D.; Mohammed, Hussni O.; Liotta, Janice L.; Kwok, Oliver; Dubey, J.P.

2013-01-01

Toxoplasmosis is a zoonosis caused by the protozoan Toxoplasma gondii, and it is found worldwide. To determine whether ungulates are reservoirs of T. gondii in an isolated and remote region of the northeastern Peruvian Amazon, antibodies to T. gondii were determined in 5 species of ungulates by the modified agglutination test (MAT). These animals were hunted by subsistence hunters along the Yavarí-Mirín River, in the northeastern Peruvian Amazon. Blood samples were collected by hunters on filter papers. For determination of T. gondii antibodies, blood was eluted from filter papers, and a titer of 1:25 was considered indicative of exposure to T. gondii. Antibodies to T. gondii were found in 26 (31.0%) peccaries (Pecari tajacu, Tayassu pecari), six (17.1%) brocket deer (Mazama americana, Mazama gouazoubira), and four (40.0%) lowland tapir (Tapirus terrestris). We also introduced a modification to the MAT protocol that allows the extraction of fluid samples from several types of laboratory-grade filter paper, thus enabling researchers to easily adapt their approaches to the materials presented to them. PMID:24918073

Dietary traits of the ungulates from the HWK EE site at Olduvai Gorge (Tanzania): Diachronic changes and seasonality.

PubMed

Rivals, Florent; Uno, Kevin T; Bibi, Faysal; Pante, Michael C; Njau, Jackson; de la Torre, Ignacio

2017-09-01

The Oldowan site HWK EE (Olduvai Gorge, Tanzania) has yielded a large fossil and stone tool assemblage at the transition from Lower to Middle Bed II, ∼1.7 Ma. Integrated tooth wear and stable isotope analyses were performed on the three most abundant ungulate taxa from HWK EE, namely Alcelaphini, cf. Antidorcas recki (Antilopini) and Equus oldowayensis (Equini), to infer dietary traits in each taxon. Some paleodietary changes were observed for cf. A. recki and E. oldowayensis based on tooth wear at the transition from the Lemuta to the Lower Augitic Sandstone (LAS) interval within the HWK EE sequence. Stable carbon and oxygen isotope data show no significant changes in bulk diet or hydroclimate between the Lemuta and LAS intervals. The combined tooth wear and stable isotope data suggest similar paleoecological conditions across the two HWK EE intervals, but that differences in vegetation consumed among ungulates may have resulted in changes in dietary niches. Integrating tooth wear and stable isotope analyses permits the characterization of ungulate diets and habitats at HWK EE where C 4 dominated and minor mixed C 3 and C 4 habitats were present. Our results provide a better understanding of the paleoenvironmental conditions of the Lemuta and LAS intervals. The LAS assemblage was mostly accumulated during relatively dry periods at Olduvai Gorge when grasses were not as readily available and grazing animals may have been more nutritionally-stressed than during the formation of the Lemuta assemblage. This helps to contextualize variations in hominin and carnivore feeding behavior observed from the faunal assemblages produced during the two main occupations of the site. Copyright © 2017 Elsevier Ltd. All rights reserved.

Gradual Dinosaur Extinction and Simultaneous Ungulate Radiation in the Hell Creek Formation

NASA Astrophysics Data System (ADS)

Sloan, Robert E.; Rigby, J. Keith; van Valen, Leigh M.; Gabriel, Diane

1986-05-01

Dinosaur extinction in Montana, Alberta, and Wyoming was a gradual process that began 7 million years before the end of the Cretaceous and accelerated rapidly in the final 0.3 million years of the Cretaceous, during the interval of apparent competition from rapidly evolving immigrating ungulates. This interval involves rapid reduction in both diversity and population density of dinosaurs. The last dinosaurs known are from a channel that contains teeth of Mantuan mammals, seven species of dinosaurs, and Paleocene pollen. The top of this channel is 1.3 meters above the likely position of the iridium anomaly, the Cretaceous/Tertiary boundary.

Effect of muscle type and frozen storage on the quality parameters of Iberian restructured meat preparations.

PubMed

Antequera, Teresa; Pérez-Palacios, Trinidad; Rodas, Elena; Rodríguez, Mar; Córdoba, Juan J

2014-10-01

The main objective of this study was to evaluate the effect of muscle type and frozen storage on the quality of restructured meat preparations from undervalued Iberian muscle to make use of meat from a high-quality and natural pig production system. The effect of two muscle types (i.e. white-glycolytic (W) and red-oxidative (R)) and frozen storage (lasting 0, 30, 60 and 90 days) on quality characteristics were assessed. Significant differences were found between the W and R Iberian restructured preparations in most physicochemical and some colour, texture and sensory traits, and in the fatty acid profile and oxidative measurements, suggesting that the R muscles are more suitable; however, the microbial contamination should be reduced. Frozen storage reduced but did not eliminate the initial microbial contamination, and it enhanced some quality traits in the Iberian restructured preparations, i.e. increased a* values, cohesiveness and juiciness and decreased adhesiveness and pastiness, without negatively affecting any parameter. Thus, frozen Iberian restructured preparations are recommended to be commercialized. In addition, the implementation or revision of Hazard Analysis and Critical Control Point is recommended to reduce microbial contamination. © The Author(s) 2013 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

Modelling larval dispersal dynamics of common sole (Solea solea) along the western Iberian coast

NASA Astrophysics Data System (ADS)

Tanner, Susanne E.; Teles-Machado, Ana; Martinho, Filipe; Peliz, Álvaro; Cabral, Henrique N.

2017-08-01

Individual-based coupled physical-biological models have become the standard tool for studying ichthyoplankton dynamics and assessing fish recruitment. Here, common sole (Solea solea L.), a flatfish of high commercial importance in Europe was used to evaluate transport of eggs and larvae and investigate the connectivity between spawning and nursery areas along the western Iberian coast as spatio-temporal variability in dispersal and recruitment patterns can result in very strong or weak year-classes causing large fluctuations in stock size. A three-dimensional particle tracking model coupled to Regional Ocean Modelling System model was used to investigate variability of sole larvae dispersal along the western Iberian coast over a five-year period (2004-2009). A sensitivity analysis evaluating: (1) the importance of diel vertical migrations of larvae and (2) the size of designated recruitment areas was performed. Results suggested that connectivity patterns of sole larvae dispersal and their spatio-temporal variability are influenced by the configuration of the coast with its topographical structures and thus the suitable recruitment area available as well as the wind-driven mesoscale circulation along the Iberian coast.

Applicability of major histocompatibility complex DRB1 alleles as markers to detect vertebrate hybridization: a case study from Iberian ibex × domestic goat in southern Spain

PubMed Central

2012-01-01

Background Hybridization between closely related wild and domestic species is of great concern because it can alter the evolutionary integrity of the affected populations. The high allelic variability of Major Histocompatibility Complex (MHC) loci usually excludes them from being used in studies to detect hybridization events. However, if a) the parental species don’t share alleles, and b) one of the parental species possesses an exceptionally low number of alleles (to facilitate analysis), then even MHC loci have the potential to detect hybrids. Results By genotyping the exon2 of the MHC class II DRB1 locus, we were able to detect hybridization between domestic goats (Capra hircus) and free-ranging Iberian ibex (Capra pyrenaica hispanica) by molecular means. Conclusions This is the first documentation of a Capra pyrenaica × Capra hircus hybridization, which presented us the opportunity to test the applicability of MHC loci as new, simple, cost-effective, and time-saving approach to detect hybridization between wild species and their domesticated relatives, thus adding value to MHC genes role in animal conservation and management. PMID:23006678

Long-term changes in composition and distribution patterns in the Iberian herpetofaunal communities since the latest Pleistocene

NASA Astrophysics Data System (ADS)

Bisbal-Chinesta, Josep Francesc; Blain, Hugues-Alexandre

2018-03-01

The climate has undergone significant changes since the end of the Last Glacial Maximum and in the course of the Holocene, parallel to important cultural transformations and migrations in the human communities. The faunal record has also suffered the effects of climate change. Amphibians and reptiles in particular have been shown to be highly sensitive because they are very susceptible to temperature alterations due to their ectothermy. This research presents the first approach to the Iberian paleobiogeography of the different species of amphibians and reptiles from the Late Pleistocene (MIS3) to present times, based on a comparative synthesis of the latest research published in recent years and the fossil record of the 58 archaeo-paleontological sites with significant assemblages. The paleoherpetofaunal associations make it possible to establish two major biotic regions during the Late Pleistocene. The first biotic region was located in the center and south of the Iberian Peninsula, with thermophilic species as the most representative taxa. The second biotic region was formed by the Atlantic-Cantabrian facade and the northeast Iberian area, dominated by hygrophilous and Euro-Siberian species, with an absence of Mediterranean species. After the Last Glacial Maximum there was an unprecedented concurrence in the northern Iberian Peninsula of autochthonous taxa from that area with thermophilic species. In the early Holocene, new species with no previous record in the Iberian Peninsula entered northern Iberia from eastern Mediterranean refugia. Finally, the introduction of North African species was the last significant biogeographical change during the Middle-Late Holocene.

Spatial and temporal characteristics of wildfire activity over the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Calado, Teresa; DaCamara, Carlos C.; Ermida, Sofia; Trigo, Isabel.

2013-04-01

According to the official reports of the European Commission, during the period 1980-2010 the Iberian Peninsula has contributed to 60% of the total burned area of 14 620 968 ha, which was recorded in the five Southern Member States with higher wildfire activity (Portugal, Spain, France, Italy and Greece). The aim of the present study is to assess fire activity over the Iberian Peninsula based on time series of hot spots extracted from the MODIS global daily active fire product (MOD14A1 and MYD14A1). This dataset, which contains the coordinates of MODIS pixels where fire events were identified together with the respective date and quality indicators, covers the period from July 2002 to August 2012. It is first shown that overall hot spot activity exhibits power law behaviour. A spatial analysis is then undertaken based on land cover information as obtained from Globcover - an ESA initiative relying on observations from the 300m MERIS on board the ENVISAT. Temporal analysis of hot spot activity is also performed based on daily information about meteorological conditions provided by the European Centre for Medium-Range Weather Forecasts. Results obtained allow defining a set of fire regions over the Iberian Peninsula determined essentially by the respective land cover type, which present coherent statistical behaviour in space and time. Finally, models of fire risk are developed for each region and their potential operational use by forest and civil protection services is discussed.

Long-Term Assessment of Wild Boar Harvesting and Cattle Removal for Bovine Tuberculosis Control in Free Ranging Populations

PubMed Central

Mentaberre, Gregorio; Romero, Beatriz; de Juan, Lucía; Navarro-González, Nora; Velarde, Roser; Mateos, Ana; Marco, Ignasi; Olivé-Boix, Xavier; Domínguez, Lucas; Lavín, Santiago; Serrano, Emmanuel

2014-01-01

Wild boar is a recognized reservoir of bovine tuberculosis (TB) in the Mediterranean ecosystems, but information is scarce outside of hotspots in southern Spain. We describe the first high-prevalence focus of TB in a non-managed wild boar population in northern Spain and the result of eight years of TB management. Measures implemented for disease control included the control of the local wild boar population through culling and stamping out of a sympatric infected cattle herd. Post-mortem inspection for detection of tuberculosis-like lesions as well as cultures from selected head and cervical lymph nodes was done in 745 wild boar, 355 Iberian ibexes and five cattle between 2004 and 2012. The seasonal prevalence of TB reached 70% amongst adult wild boar and ten different spoligotypes and 13 MIRU-VNTR profiles were detected, although more than half of the isolates were included in the same clonal complex. Only 11% of infected boars had generalized lesions. None of the ibexes were affected, supporting their irrelevance in the epidemiology of TB. An infected cattle herd grazed the zone where 168 of the 197 infected boars were harvested. Cattle removal and wild boar culling together contributed to a decrease in TB prevalence. The need for holistic, sustained over time, intensive and adapted TB control strategies taking into account the multi-host nature of the disease is highlighted. The potential risk for tuberculosis emergence in wildlife scenarios where the risk is assumed to be low should be addressed. PMID:24558435

Genetic diversity and structure of Iberian Peninsula cowpeas compared to world-wide cowpea accessions using high density SNP markers.

PubMed

Carvalho, Márcia; Muñoz-Amatriaín, María; Castro, Isaura; Lino-Neto, Teresa; Matos, Manuela; Egea-Cortines, Marcos; Rosa, Eduardo; Close, Timothy; Carnide, Valdemar

2017-11-21

Cowpea (Vigna unguiculata L. Walp) is an important legume crop due to its high protein content, adaptation to heat and drought and capacity to fix nitrogen. Europe has a deficit of cowpea production. Knowledge of genetic diversity among cowpea landraces is important for the preservation of local varieties and is the basis to obtain improved varieties. The aims of this study were to explore diversity and the genetic structure of a set of Iberian Peninsula cowpea accessions in comparison to a worldwide collection and to infer possible dispersion routes of cultivated cowpea. The Illumina Cowpea iSelect Consortium Array containing 51,128 SNPs was used to genotype 96 cowpea accessions including 43 landraces and cultivars from the Iberian Peninsula, and 53 landraces collected worldwide. Four subpopulations were identified. Most Iberian Peninsula accessions clustered together with those from other southern European and northern African countries. Only one accession belonged to another subpopulation, while two accessions were 'admixed'. A lower genetic diversity level was found in the Iberian Peninsula accessions compared to worldwide cowpeas. The genetic analyses performed in this study brought some insights into worldwide genetic diversity and structure and possible dispersion routes of cultivated cowpea. Also, it provided an in-depth analysis of genetic diversity in Iberian Peninsula cowpeas that will help guide crossing strategies in breeding programs.

Downscaling of Global Climate Change Estimates to Regional Scales: An Application to Iberian Rainfall in Wintertime.

NASA Astrophysics Data System (ADS)

von Storch, Hans; Zorita, Eduardo; Cubasch, Ulrich

1993-06-01

A statistical strategy to deduct regional-scale features from climate general circulation model (GCM) simulations has been designed and tested. The main idea is to interrelate the characteristic patterns of observed simultaneous variations of regional climate parameters and of large-scale atmospheric flow using the canonical correlation technique.The large-scale North Atlantic sea level pressure (SLP) is related to the regional, variable, winter (DJF) mean Iberian Peninsula rainfall. The skill of the resulting statistical model is shown by reproducing, to a good approximation, the winter mean Iberian rainfall from 1900 to present from the observed North Atlantic mean SLP distributions. It is shown that this observed relationship between these two variables is not well reproduced in the output of a general circulation model (GCM).The implications for Iberian rainfall changes as the response to increasing atmospheric greenhouse-gas concentrations simulated by two GCM experiments are examined with the proposed statistical model. In an instantaneous `2 C02' doubling experiment, using the simulated change of the mean North Atlantic SLP field to predict Iberian rainfall yields, there is an insignificant increase of area-averaged rainfall of 1 mm/month, with maximum values of 4 mm/month in the northwest of the peninsula. In contrast, for the four GCM grid points representing the Iberian Peninsula, the change is 10 mm/month, with a minimum of 19 mm/month in the southwest. In the second experiment, with the IPCC scenario A ("business as usual") increase Of C02, the statistical-model results partially differ from the directly simulated rainfall changes: in the experimental range of 100 years, the area-averaged rainfall decreases by 7 mm/month (statistical model), and by 9 mm/month (GCM); at the same time the amplitude of the interdecadal variability is quite different.

Extreme precipitation events in the Iberian Peninsula and its association with Atmospheric Rivers

NASA Astrophysics Data System (ADS)

Ramos, Alexandre M.; Liberato, Margarida L. R.; Trigo, Ricardo M.

2015-04-01

Extreme precipitation events in the Iberian Peninsula during the winter half of the year have major socio-economic impacts associated with floods, landslides, extensive property damage and life losses. In recent years, a number of works have shed new light on the role played by Atmospheric Rivers (ARs) in the occurrence of extreme precipitation events in both Europe and USA. ARs are relatively narrow regions of concentrated WV responsible for horizontal transport in the lower atmosphere corresponding to the core section of the broader warm conveyor belt occurring over the oceans along the warm sector of extra-tropical cyclones. Over the North Atlantic ARs are usually W-E oriented steered by pre-frontal low level jets along the trailing cold front and subsequently feed the precipitation in the extra-tropical cyclones. It was shown that more than 90% of the meridional WV transport in the mid-latitudes occurs in the AR, although they cover less than 10% of the area of the globe. The large amount of WV that is transported can lead to heavy precipitation and floods. An automated ARs detection algorithm is used for the North Atlantic Ocean Basin allowing the identification and a comprehensive characterization of the major AR events that affected the Iberian Peninsula over the 1948-2012 period. The extreme precipitation days in the Iberian Peninsula were assessed recently by us (Ramos et al., 2014) and their association (or not) with the occurrence of AR is analyzed in detail here. The extreme precipitation days are ranked by their magnitude and are obtained after considering 1) the area affected and 2) the precipitation intensity. Different rankings are presented for the entire Iberian Peninsula, Portugal and also for the six largest Iberian river basins (Minho, Duero, Tagus, Guadiana, Guadalquivir and Ebro) covering the 1950-2008 period (Ramos et al., 2014). Results show that the association between ARs and extreme precipitation days in the western domains (Portugal

Long-term vegetation activity trends in the Iberian Peninsula and The Balearic Islands using high spatial resolution NOAA-AVHRR data (1981 - 2015).

NASA Astrophysics Data System (ADS)

Martin-Hernandez, Natalia; Vicente-Serrano, Sergio; Azorin-Molina, Cesar; Begueria-Portugues, Santiago; Reig-Gracia, Fergus; Zabalza-Martínez, Javier

2017-04-01

We have analysed trends in the Normalized Difference Vegetation Index (NDVI) in the Iberian Peninsula and The Balearic Islands over the period 1981 - 2015 using a new high resolution data set from the entire available NOAA - AVHRR images (IBERIAN NDVI dataset). After a complete processing including geocoding, calibration, cloud removal, topographic correction and temporal filtering, we obtained bi-weekly time series. To assess the accuracy of the new IBERIAN NDVI time-series, we have compared temporal variability and trends of NDVI series with those results reported by GIMMS 3g and MODIS (MOD13A3) NDVI datasets. In general, the IBERIAN NDVI showed high reliability with these two products but showing higher spatial resolution than the GIMMS dataset and covering two more decades than the MODIS dataset. Using the IBERIAN NDVI dataset, we analysed NDVI trends by means of the non-parametric Mann-Kendall test and Theil-Sen slope estimator. In average, vegetation trends in the study area show an increase over the last decades. However, there are local spatial differences: the main increase has been recorded in humid regions of the north of the Iberian Peninsula. The statistical techniques allow finding abrupt and gradual changes in different land cover types during the analysed period. These changes are related with human activity due to land transformations (from dry to irrigated land), land abandonment and forest recovery.

Potential foraging decisions by a desert ungulate to balance water and nutrient intake in a water-stressed environment

USGS Publications Warehouse

Gedir, Jay V.; Cain, James W.; Krausman, Paul R.; Allen, Jamison D.; Duff, Glenn C.; Morgart, John R.

2016-01-01

Arid climates have unpredictable precipitation patterns, and wildlife managers often provide supplemental water to help desert ungulates endure the hottest, driest periods. When surface water is unavailable, the only source of water for ungulates comes from the forage they consume, and they must make resourceful foraging decisions to meet their requirements. We compared two desert bighorn sheep (Ovis canadensis nelsoni) populations in Arizona, USA: a treatment population with supplemental water removed during treatment, and a control population. We examined whether sheep altered their seasonal diets without supplemental water. We calculated water and nutrient intake and metabolic water production from dry matter intake and forage moisture and nitrogen content, to determine whether sheep could meet their seasonal daily water and nutrient requirements solely from forage. Diets of sheep were higher in protein (all seasons) and moisture (autumn and winter) during treatment compared to pretreatment. During treatment, sheep diet composition was similar between the treatment and control populations, which suggests, under the climatic conditions of this study, water removal did not influence sheep diets. We estimated that under drought conditions, without any surface water available (although small ephemeral potholes would contain water after rains), female and male sheep would be unable to meet their daily water requirements in all seasons, except winter, when reproductive females had a nitrogen deficit. We determined that sheep could achieve water and nutrient balances in all seasons by shifting their total diet proportions by 8–55% from lower to higher moisture and nitrogen forage species. We elucidate how seasonal forage quality and foraging decisions by desert ungulates allow them to cope with their xeric and uncertain environment, and suggest that, with the forage conditions observed in our study area during this study period, providing supplemental water during

Potential Foraging Decisions by a Desert Ungulate to Balance Water and Nutrient Intake in a Water-Stressed Environment.

PubMed

Gedir, Jay V; Cain, James W; Krausman, Paul R; Allen, Jamison D; Duff, Glenn C; Morgart, John R

2016-01-01

Arid climates have unpredictable precipitation patterns, and wildlife managers often provide supplemental water to help desert ungulates endure the hottest, driest periods. When surface water is unavailable, the only source of water for ungulates comes from the forage they consume, and they must make resourceful foraging decisions to meet their requirements. We compared two desert bighorn sheep (Ovis canadensis nelsoni) populations in Arizona, USA: a treatment population with supplemental water removed during treatment, and a control population. We examined whether sheep altered their seasonal diets without supplemental water. We calculated water and nutrient intake and metabolic water production from dry matter intake and forage moisture and nitrogen content, to determine whether sheep could meet their seasonal daily water and nutrient requirements solely from forage. Diets of sheep were higher in protein (all seasons) and moisture (autumn and winter) during treatment compared to pretreatment. During treatment, sheep diet composition was similar between the treatment and control populations, which suggests, under the climatic conditions of this study, water removal did not influence sheep diets. We estimated that under drought conditions, without any surface water available (although small ephemeral potholes would contain water after rains), female and male sheep would be unable to meet their daily water requirements in all seasons, except winter, when reproductive females had a nitrogen deficit. We determined that sheep could achieve water and nutrient balances in all seasons by shifting their total diet proportions by 8-55% from lower to higher moisture and nitrogen forage species. We elucidate how seasonal forage quality and foraging decisions by desert ungulates allow them to cope with their xeric and uncertain environment, and suggest that, with the forage conditions observed in our study area during this study period, providing supplemental water during

Potential Foraging Decisions by a Desert Ungulate to Balance Water and Nutrient Intake in a Water-Stressed Environment

PubMed Central

Gedir, Jay V.; Cain, James W.; Krausman, Paul R.; Allen, Jamison D.; Duff, Glenn C.

2016-01-01

Arid climates have unpredictable precipitation patterns, and wildlife managers often provide supplemental water to help desert ungulates endure the hottest, driest periods. When surface water is unavailable, the only source of water for ungulates comes from the forage they consume, and they must make resourceful foraging decisions to meet their requirements. We compared two desert bighorn sheep (Ovis canadensis nelsoni) populations in Arizona, USA: a treatment population with supplemental water removed during treatment, and a control population. We examined whether sheep altered their seasonal diets without supplemental water. We calculated water and nutrient intake and metabolic water production from dry matter intake and forage moisture and nitrogen content, to determine whether sheep could meet their seasonal daily water and nutrient requirements solely from forage. Diets of sheep were higher in protein (all seasons) and moisture (autumn and winter) during treatment compared to pretreatment. During treatment, sheep diet composition was similar between the treatment and control populations, which suggests, under the climatic conditions of this study, water removal did not influence sheep diets. We estimated that under drought conditions, without any surface water available (although small ephemeral potholes would contain water after rains), female and male sheep would be unable to meet their daily water requirements in all seasons, except winter, when reproductive females had a nitrogen deficit. We determined that sheep could achieve water and nutrient balances in all seasons by shifting their total diet proportions by 8–55% from lower to higher moisture and nitrogen forage species. We elucidate how seasonal forage quality and foraging decisions by desert ungulates allow them to cope with their xeric and uncertain environment, and suggest that, with the forage conditions observed in our study area during this study period, providing supplemental water during

Gene Sets for Utilization of Primary and Secondary Nutrition Supplies in the Distal Gut of Endangered Iberian Lynx

PubMed Central

Alcaide, María; Messina, Enzo; Richter, Michael; Bargiela, Rafael; Peplies, Jörg; Huws, Sharon A.; Newbold, Charles J.; Golyshin, Peter N.; Simón, Miguel A.; López, Guillermo; Yakimov, Michail M.; Ferrer, Manuel

2012-01-01

Recent studies have indicated the existence of an extensive trans-genomic trans-mural co-metabolism between gut microbes and animal hosts that is diet-, host phylogeny- and provenance-influenced. Here, we analyzed the biodiversity at the level of small subunit rRNA gene sequence and the metabolic composition of 18 Mbp of consensus metagenome sequences and activity characteristics of bacterial intra-cellular extracts, in wild Iberian lynx (Lynx pardinus) fecal samples. Bacterial signatures (14.43% of all of the Firmicutes reads and 6.36% of total reads) related to the uncultured anaerobic commensals Anaeroplasma spp., which are typically found in ovine and bovine rumen, were first identified. The lynx gut was further characterized by an over-representation of ‘presumptive’ aquaporin aqpZ genes and genes encoding ‘active’ lysosomal-like digestive enzymes that are possibly needed to acquire glycerol, sugars and amino acids from glycoproteins, glyco(amino)lipids, glyco(amino)glycans and nucleoside diphosphate sugars. Lynx gut was highly enriched (28% of the total glycosidases) in genes encoding α-amylase and related enzymes, although it exhibited low rate of enzymatic activity indicative of starch degradation. The preponderance of β-xylosidase activity in protein extracts further suggests lynx gut microbes being most active for the metabolism of β-xylose containing plant N-glycans, although β-xylosidases sequences constituted only 1.5% of total glycosidases. These collective and unique bacterial, genetic and enzymatic activity signatures suggest that the wild lynx gut microbiota not only harbors gene sets underpinning sugar uptake from primary animal tissues (with the monotypic dietary profile of the wild lynx consisting of 80–100% wild rabbits) but also for the hydrolysis of prey-derived plant biomass. Although, the present investigation corresponds to a single sample and some of the statements should be considered qualitative, the data most likely

Indirect effects of domestic and wild herbivores on butterflies in an African savanna

PubMed Central

Wilkerson, Marit L; Roche, Leslie M; Young, Truman P

2013-01-01

Indirect interactions driven by livestock and wild herbivores are increasingly recognized as important aspects of community dynamics in savannas and rangelands. Large ungulate herbivores can both directly and indirectly impact the reproductive structures of plants, which in turn can affect the pollinators of those plants. We examined how wild herbivores and cattle each indirectly affect the abundance of a common pollinator butterfly taxon, Colotis spp., at a set of long-term, large herbivore exclosure plots in a semiarid savanna in central Kenya. We also examined effects of herbivore exclusion on the main food plant of Colotis spp., which was also the most common flowering species in our plots: the shrub Cadaba farinosa. The study was conducted in four types of experimental plots: cattle-only, wildlife-only, cattle and wildlife (all large herbivores), and no large herbivores. Across all plots, Colotis spp. abundances were positively correlated with both Cadaba flower numbers (adult food resources) and total Cadaba canopy area (larval food resources). Structural equation modeling (SEM) revealed that floral resources drove the abundance of Colotis butterflies. Excluding browsing wildlife increased the abundances of both Cadaba flowers and Colotis butterflies. However, flower numbers and Colotis spp. abundances were greater in plots with cattle herbivory than in plots that excluded all large herbivores. Our results suggest that wild browsing herbivores can suppress pollinator species whereas well-managed cattle use may benefit important pollinators and the plants that depend on them. This study documents a novel set of ecological interactions that demonstrate how both conservation and livelihood goals can be met in a working landscape with abundant wildlife and livestock. PMID:24198932

Distribution of endogenous type B and type D sheep retrovirus sequences in ungulates and other mammals.

PubMed Central

Hecht, S J; Stedman, K E; Carlson, J O; DeMartini, J C

1996-01-01

The jaagsiekte sheep retrovirus (JSRV), which appears to be a type B/D retrovirus chimera, has been incriminated as the cause of ovine pulmonary carcinoma. Recent studies suggest that the sequences related to this virus are found in the genomes of normal sheep and goats. To learn whether there are breeds of sheep that lack the endogenous viral sequences and to study their distribution among other groups of mammals, we surveyed several domestic sheep and goat breeds, other ungulates, and various mammal groups for sequences related to JSRV. Probes prepared from the envelope (SU) region of JSRV and the capsid (CA) region of a Peruvian type D virus related to JSRV were used in Southern blot hybridization with genomic DNA followed by low- and high-stringency washes. Fifteen to 20 CA and SU bands were found in all members of the 13 breeds of domestic sheep and 6 breeds of goats tested. There were similar findings in 6 wild Ovis and Capra genera. Within 22 other genera of Bovidae including domestic cattle, and 7 other families of Artiodactyla including Cervidae, there were usually a few CA or SU bands at low stringency and rare bands at high stringency. Among 16 phylogenetically distant genera, there were generally fewer bands hybridizing with either probe. These results reveal wide-spread phylogenetic distribution of endogenous type B and type D retroviral sequences related to JSRV among mammals and argue for further investigation of their potential role in disease. Images Fig. 1 Fig. 2 Fig. 3 Fig. 4 Fig. 5 PMID:8622932

Recent decadal trends in Iberian water vapour: GPS analysis and WRF process study

NASA Astrophysics Data System (ADS)

Miranda, Pedro M. A.; Nogueira, Miguel; Semedo, Alvaro; Benevides, Pedro; Catalao, Joao; Costa, Vera

2016-04-01

A 24-year simulation of the recent Iberian climate, using the WRF model at 9km resolution forced by ERA-Interim reanalysis (1989-2012), is analysed for the decadal evolution of the upwelling forcing coastal wind and for column integrated Precipitable water vapour (PWV). Results indicate that, unlike what was found by Bakun et al. (2009) for the Peruvian region, a statistically significant trend in the upwelling favourable (northerly) wind has been accompanied by a corresponding decrease in PWV, not only inland but also over the coastal waters. Such increase is consistent with a reinforced northerly coastal jet in the maritime boundary layer contributing to atmospheric Ekman pumping of dry continental air into the coastal region. Diagnostics of the prevalence of the Iberian thermal low following Hoinka and Castro (2003) also show a positive trend in its frequency during an extended summer period (April to September). These results are consistent with recent studies indicating an upward trend in the frequency of upwelling in SW Iberia (Alves and Miranda 2013), and may be relevant for climate change applications as an increase in coastal upwelling (Miranda et al 2013) may lead to substantial regional impacts in the subtropics. The same analysis with ERA-Interim reanalysis data, which was used to force the WRF simulations, does not reveal the same signal in PWV, and indeed correlates poorly with the GPS observations, indicating that the data assimilation process makes the water vapour data in reanalysis unusable for climate change purposes. The good correlation between the WRF simulated data and GPS observations allow for a detailed analysis of the processes involved in the evolution of the PWV field. Akcnowledgements: Study done within FCT Grant RECI/GEO-MET/0380/2012, financially supported by FCT Grant UID/ GEO/50019/2013-IDL Alves JMR, Miranda PMA (2013) Variability of Iberian upwelling implied by ERA-40 and ERA-Interim reanalyses, Tellus A 2013, http

Feral goats in the Hawaiian Islands: understanding the behavioral ecology of nonnative ungulates with GPS and remote sensing technology

Treesearch

Mark Chynoweth; Creighton M. Litton; Christopher A. Lepczyk; Susan Cordell

2010-01-01

Nonnative feral ungulates have both direct and indirect impacts on native ecosystems. Hawai`i is particularly susceptible to biological invasions, as the islands have evolved in extreme geographic isolation. In this paper we explore the ecological impacts of nonnative feral goats (Capra hircus) in the Hawaiian Islands, including both the current...

Sensitivity of two Iberian lakes to North Atlantic atmospheric circulation modes

NASA Astrophysics Data System (ADS)

Hernández, Armand; Trigo, Ricardo M.; Pla-Rabes, Sergi; Valero-Garcés, Blas L.; Jerez, Sonia; Rico-Herrero, Mayte; Vega, José C.; Jambrina-Enríquez, Margarita; Giralt, Santiago

2015-12-01

The North Atlantic Oscillation (NAO) exerts a major influence on the climate of the North Atlantic region. However, other atmospheric circulation modes (ACMs), such as the East Atlantic (EA) and Scandinavian (SCAND) patterns, also play significant roles. The dynamics of lakes on the Iberian Peninsula are greatly controlled by climatic parameters, but their relationship with these various ACMs has not been investigated in detail. In this paper, we analyze monthly meteorological and limnological long-term datasets (1950-2011 and 1992-2011, respectively) from two lakes on the northern and central Iberian Peninsula (Sanabria and Las Madres) to develop an understanding of the seasonal sensitivity of these freshwater systems to the NAO, EA and SCAND circulation modes. The limnological variability within Lake Sanabria is primarily controlled by fluctuations in the seasonal precipitation and wind, and the primary ACMs associated with the winter limnological processes are the NAO and the SCAND modes, whereas only the EA mode appears to weakly influence processes during the summer. However, Lake Las Madres is affected by precipitation, wind and, to a lesser extent, temperature, whereas the ACMs have less influence. Therefore, we aim to show that the lakes of the Iberian Peninsula are sensitive to these ACMs. The results presented here indicate that the lake dynamics, in some cases, have a higher sensitivity to variations in the ACMs than single local meteorological variables. However, certain local features, such as geography, lake morphology and anthropic influences, are crucial to properly record the signals of these ACMs.

The Role of Game (Wild Boar and Roe Deer) in the Spread of Tick-Borne Encephalitis in the Czech Republic

PubMed Central

Daniel, Milan; Benes, Cestmir; Maly, Marek

2014-01-01

Abstract In the Czech Republic, the incidence of human tick-borne encephalitis (TBE) has been increasing over the last two decades. At the same time, populations of game have also shown an upward trend. In this country, the ungulate game is the main host group of hosts for Ixodes ricinus female ticks. This study examined the potential contribution of two most widespread game species (roe deer [Capreolus capreolus] and wild boar [Sus scrofa]) to the high incidence of TBE in the Czech Republic, using the annual numbers of culls as a proxy for the game population. This was an ecological study, with annual figures for geographical areas—municipalities with extended competence (MEC)—used as units of analysis. Between 2003 and 2011, a total of 6213 TBE cases were reported, and 1062,308 roe deer and 989,222 wild boars were culled; the culls of roe deer did not demonstrate a clear temporal trend, but wild boar culls almost doubled (from 77,269 to 143,378 per year). Statistical analyses revealed a positive association between TBE incidence rate and the relative number of culled wild boars. In multivariate analyses, a change in the numbers of culled wild boars between the 25th and 75th percentile was associated with TBE incidence rate ratio of 1.23 (95% confidence interval 1.07–1.41, p=0.003). By contrast, the association of TBE with culled roe deer was not statistically significant (p=0.481). The results suggest that the size of the wild boar population may have contributed to the current high levels and the rising trend in incidence of TBE, whereas the regulated population of roe deer does not seem to be implicated in recent geographical or temporal variations in TBE in the Czech Republic. PMID:25409271

Conservation genetics of managed ungulate populations

USGS Publications Warehouse

Scribner, Kim T.

1993-01-01

Natural populations of many species are increasingly impacted by human activities. Perturbations are particularly pronunced for large ungulates due in part to sport and commercial harvest, to reductions and fragmentation of native habitat, and as the result of reintroductions. These perturbations affect population size, sex and age composition, and population breeding structure, and as a consequence affect the levels and partitioning of genetic variation. Three case histories highlighting long-term ecological genetic research on mule deer Odocoileus hemionus (Rafinesque, 1817), white-tailed deer O. virginianus (Zimmermann, 1780), and Alpine ibex Capra i. ibex Linnaeus, 1758 are presented. Joint examinations of population ecological and genetic data from several populations of each species reveal: (1) that populations are not in genetic equilibrium, but that allele frequencies and heterozygosity change dramatically over time and among cohorts produced in successive years, (2) populations are genetically structured over short and large geographic distances reflecting local breeding structure and patterns of gene flow, respectively; however, this structure is quite dynamic over time, due in part to population exploitation, and (3) restocking programs are often undertaken with small numbers of founding individuals resulting in dramatic declines in levels of genetic variability and increasing levels of genetic differentiation among populations due to genetic drift. Genetic characteristics have and will continue to provide valuable indirect sources of information relating enviromental and human perturbations to changes in population processes.

Native ungulates of diverse body sizes collectively regulate long-term woody plant demography and structure of a semi-arid savanna

USDA-ARS?s Scientific Manuscript database

Large mammalian herbivores and fire are both well recognized to play important roles in regulating tree cover and biomass in savannas. However, the extent to which browsing ungulates are capable of regulating tree populations in the absence of other synergistic disturbances such as fire is unclear. ...

Novel efficient genome-wide SNP panels for the conservation of the highly endangered Iberian lynx.

PubMed

Kleinman-Ruiz, Daniel; Martínez-Cruz, Begoña; Soriano, Laura; Lucena-Perez, Maria; Cruz, Fernando; Villanueva, Beatriz; Fernández, Jesús; Godoy, José A

2017-07-21

The Iberian lynx (Lynx pardinus) has been acknowledged as the most endangered felid species in the world. An intense contraction and fragmentation during the twentieth century left less than 100 individuals split in two isolated and genetically eroded populations by 2002. Genetic monitoring and management so far have been based on 36 STRs, but their limited variability and the more complex situation of current populations demand more efficient molecular markers. The recent characterization of the Iberian lynx genome identified more than 1.6 million SNPs, of which 1536 were selected and genotyped in an extended Iberian lynx sample. We validated 1492 SNPs and analysed their heterozygosity, Hardy-Weinberg equilibrium, and linkage disequilibrium. We then selected a panel of 343 minimally linked autosomal SNPs from which we extracted subsets optimized for four different typical tasks in conservation applications: individual identification, parentage assignment, relatedness estimation, and admixture classification, and compared their power to currently used STR panels. We ascribed 21 SNPs to chromosome X based on their segregation patterns, and identified one additional marker that showed significant differentiation between sexes. For all applications considered, panels of autosomal SNPs showed higher power than the currently used STR set with only a very modest increase in the number of markers. These novel panels of highly informative genome-wide SNPs provide more powerful, efficient, and flexible tools for the genetic management and non-invasive monitoring of Iberian lynx populations. This example highlights an important outcome of whole-genome studies in genetically threatened species.

Malaria in Farmed Ungulates: an Exciting New System for Comparative Parasitology.

PubMed

Perkins, Susan L

2018-04-25

A wide array of vertebrates can serve as the intermediate hosts to malaria parasites (Apicomplexa: Haemosporida), such as birds, lizards, and several groups of mammals, including primates, bats, rodents, and ungulates. The latter group of hosts has not been intensively studied since early descriptions of a small set of taxa were published, but new reports of these parasites in both expected and new hosts have recently been published. A new paper reports the presence of Plasmodium odocoilei in farmed white-tailed deer in Florida, particularly in animals less than 1 year old, and provides evidence that the parasites may contribute to mortality in fawns. That paper opens new opportunities to study the malaria parasite-mammal interface in North America. Copyright © 2018 Perkins.

Pleistocene and Holocene Iberian flora: a complete picture and review

NASA Astrophysics Data System (ADS)

González Sampériz, Penélope

2010-05-01

A detailed analysis of the location and composition of Iberian vegetation types during the whole Pleistocene and Holocene periods shows a complex patched landscape with persistence of different types of ecosystems, even during glacial times. In addition, recent, high-resolution palaeoecological records are changing the traditional picture of post-glacial vegetation succession in the Iberian Peninsula. The main available charcoal and pollen sequences include, coniferous and deciduous forest, steppes, shrublands, savannahs and glacial refugia during the Pleistocene for Meso-thermophytes (phytodiversity reservoirs), in different proportions. This panorama suggests an environmental complexity that relates biotic responses to climate changes forced by Milankovitch cycles, suborbital forcings and by the latitudinal and physiographic particularities of the Iberian Peninsula. Thus, many factors are critical in the course of vegetational developments and strong regional differences are observed since the Early Pleistocene. Currently, the flora of Iberia is located in two biogeographical/climatic regions: the Eurosiberian and the Mediterranean. The first one includes northern and northwestern areas of the peninsula, where post-glacial responses of vegetation are very similar to Central Europe, although with some particularities due to its proximity to both the Atlantic Ocean and the Mediterranean region. The second one comprises the main territory of Iberia and shows more complex patterns and singularities, now and in the past. Steppe landscapes dominated extensive areas over all the territory during the cold spells of the Quaternary, especially during the Late Pleistocene up to the Last Glacial Maximum, but differences in composition of the dominant taxa (Compositae versus Artemisia) are observed since the Early Pleistocene, probably related to moisture regional gradients. Coastal shelves and intramountainous valleys, even in continental areas, are spots of floristic

Climatic record of the Iberian peninsula from lake Moncortes' sediments

NASA Astrophysics Data System (ADS)

Cao, Min; Huguet, Carme; Rull, Valenti; Valero, Blas; Rosell-Mele, Antoni

2014-05-01

Climatic record of the Iberian peninsula from lake Moncortes' sediments Min Cao1, Carme Huguet1, Valenti Rull2, Blas L. Valero-Garces3, Antoni Rosell-Melé1,4 1Institut de Ciència i Tecnologia Ambientals (ICTA), Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallès, Catalonia, Spain; 2Institut de Botanic de Barcelona (CSIC), Passeig del Migdia s/n, 08038, Barcelona, Spain, 3 Instituto Pirenaico de Ecologıa (CSIC), Avda. Montañana 1005, 50059 Zaragoza, Spain, 4Institució Catalana de Recerca i Estudis Avançats (ICREA), 08010 Barcelona, Catalonia, Spain. The continuing buildup of industrial greenhouse gases in the atmosphere and concomitant increase in global temperatures has made much of the world's society aware that decades to centuries of environmental change lie ahead, and that these will have profound economic, political and societal impacts. The Iberian Peninsula lies in the boundary between tropical and subtropical climates and seems to amplify the climatic signals form the northern hemisphere through both atmospheric and water circulation feedbacks, making it an ideal site to monitor Northern hemisphere climate changes. This extreme sensitivity to climatic changes also makes the Iberian Peninsula extremely vulnerable to future climate changes. This is why understanding sensitivity to climate change and the consequences it will have on both climate and the hydrological cycle is key to implement preventive measures. The aim of our study is to come up with a high resolution quantitative reconstruction of climate variability (temperature, production and precipitation) in the Iberian Peninsula from lake sediments. We also want to establish the relation between those changes and the ones observed in both ice cores from Greenland and paleotemperature records from marine sediments of the continental Iberian margin. For these reasons we sampled a core in Moncortes (42.3N, 0.99E), a lake of karstic origin with an average depth of 25m and an area of 0

Long-term understory vegetation dynamics and responses to ungulate exclusion in the dry forest of Mona Island

Treesearch

J. Rojas-Sandoval; E.J. Melendez-Ackerman; J. Fumero-Caban; M. Garcia-Bermudez; J. Sustache; S. Aragon; M. Morales-Vargas; G. Olivieri; D.S. Fernandez

2016-01-01

Mona Island protects one of the most important remnants of Caribbean dry forests and hosts a high diversity of rare and endangered plant and animal species. Feral ungulates (goats and pigs) were introduced to the island ~500 y ago, and their populations may be threatening the conservation of Mona Island’s native biodiversity. In this study, we used permanent fenced and...

Meta-Analysis of Mitochondrial DNA Variation in the Iberian Peninsula.

PubMed

Barral-Arca, Ruth; Pischedda, Sara; Gómez-Carballa, Alberto; Pastoriza, Ana; Mosquera-Miguel, Ana; López-Soto, Manuel; Martinón-Torres, Federico; Álvarez-Iglesias, Vanesa; Salas, Antonio

2016-01-01

The Iberian Peninsula has been the focus of attention of numerous studies dealing with mitochondrial DNA (mtDNA) variation, most of them targeting the control region segment. In the present study we sequenced the control region of 3,024 Spanish individuals from areas where available data were still limited. We also compiled mtDNA haplotypes from the literature involving 4,588 sequences and 28 population groups or small regions. We meta-analyzed all these data in order to shed further light on patterns of geographic variation, taking advantage of the large sample size and geographic coverage, in contrast with the atomized sampling strategy of previous work. The results indicate that the main mtDNA haplogroups show primarily clinal geographic patterns across the Iberian geography, roughly along a North-South axis. Haplogroup HV0 (where haplogroup U is nested) is more prevalent in the Franco Cantabrian region, in good agreement with previous findings that identified this area as a climate refuge during the Last Glacial Maximum (LGM), prior to a subsequent demographic re-expansion towards Central Europe and the Mediterranean. Typical sub-Saharan and North African lineages are slightly more prevalent in South Iberia, although at low frequencies; this pattern has been shaped mainly by the transatlantic slave trade and the Arab invasion of the Iberian Peninsula. The results also indicate that summary statistics that aim to measure molecular variation, or AMOVA, have limited sensitivity to detect population substructure, in contrast to patterns revealed by phylogeographic analysis. Overall, the results suggest that mtDNA variation in Iberia is substantially stratified. These patterns might be relevant in biomedical studies given that stratification is a common cause of false positives in case-control mtDNA association studies, and should be also considered when weighting the DNA evidence in forensic casework, which is strongly dependent on haplotype frequencies.

Meta-Analysis of Mitochondrial DNA Variation in the Iberian Peninsula

PubMed Central

Barral-Arca, Ruth; Pischedda, Sara; Gómez-Carballa, Alberto; Pastoriza, Ana; Mosquera-Miguel, Ana; López-Soto, Manuel; Martinón-Torres, Federico; Álvarez-Iglesias, Vanesa; Salas, Antonio

2016-01-01

The Iberian Peninsula has been the focus of attention of numerous studies dealing with mitochondrial DNA (mtDNA) variation, most of them targeting the control region segment. In the present study we sequenced the control region of 3,024 Spanish individuals from areas where available data were still limited. We also compiled mtDNA haplotypes from the literature involving 4,588 sequences and 28 population groups or small regions. We meta-analyzed all these data in order to shed further light on patterns of geographic variation, taking advantage of the large sample size and geographic coverage, in contrast with the atomized sampling strategy of previous work. The results indicate that the main mtDNA haplogroups show primarily clinal geographic patterns across the Iberian geography, roughly along a North-South axis. Haplogroup HV0 (where haplogroup U is nested) is more prevalent in the Franco Cantabrian region, in good agreement with previous findings that identified this area as a climate refuge during the Last Glacial Maximum (LGM), prior to a subsequent demographic re-expansion towards Central Europe and the Mediterranean. Typical sub-Saharan and North African lineages are slightly more prevalent in South Iberia, although at low frequencies; this pattern has been shaped mainly by the transatlantic slave trade and the Arab invasion of the Iberian Peninsula. The results also indicate that summary statistics that aim to measure molecular variation, or AMOVA, have limited sensitivity to detect population substructure, in contrast to patterns revealed by phylogeographic analysis. Overall, the results suggest that mtDNA variation in Iberia is substantially stratified. These patterns might be relevant in biomedical studies given that stratification is a common cause of false positives in case-control mtDNA association studies, and should be also considered when weighting the DNA evidence in forensic casework, which is strongly dependent on haplotype frequencies. PMID

Pleistocene leopards in the Iberian Peninsula: New evidence from palaeontological and archaeological contexts in the Mediterranean region

NASA Astrophysics Data System (ADS)

Sanchis, Alfred; Tormo, Carmen; Sauqué, Víctor; Sanchis, Vicent; Díaz, Rebeca; Ribera, Agustí; Villaverde, Valentín

2015-09-01

This study analyses the fossil record of leopards in the Iberian Peninsula. According to the systematic and morphometric features of new remains, identified mainly in Late Pleistocene palaeontological and archaeological sites of the Mediterranean region, they can be attributed to Panthera pardus Linnaeus 1758. The findings include the most complete leopard skeleton from the Iberian Peninsula and one of the most complete in Europe, found in a chasm (Avenc de Joan Guitón) south of Valencia. The new citations and published data are used to establish the leopard's distribution in the Iberian Peninsula, showing its maximum development during the Late Pleistocene. Some references suggest that the species survived for longer here (Lateglacial-Early Holocene) than in other parts of Europe. Finally, the contexts of appearance and origin of leopard remains are described and the processes of interaction with prehistoric human groups are assessed.

Effects of cadmium exposure on Iberian ribbed newt (Pleurodeles waltl) testes

PubMed Central

Hirako, Ayano; Takeoka, Yuki; Hayashi, Toshinori; Takeuchi, Takashi; Furukawa, Satoshi; Sugiyama, Akihiko

2017-01-01

To characterize the histomorphologic effects of cadmium on adult newt testes, male Iberian ribbed newts (6 months post-hatching) were intraperitoneally exposed to a single dose of 50 mg/kg of cadmium, with histologic analysis of the testes at 24, 48, 72, and 96 h. Beginning 24 h after cadmium exposure, apoptosis of spermatogonia and spermatocytes was observed, and congestion was observed in the interstitial vessels of the testes. Throughout the experimental period, the rates of pyknotic cells and TUNEL and cleaved caspase-3 positivity were significantly higher in the spermatogonia and spermatocytes of cadmium-treated newts compared with control newts. There were no significant differences between cadmium-treated and control newts in phospho-histone H3 positivity in the spermatogonia and spermatocytes. These results suggest that spermatogonia and spermatocytes in adult Iberian ribbed newts are highly sensitive to cadmium. This is the first report of the histomorphologic characteristics of cadmium-induced testicular dysfunction in newts. PMID:29097846

Long-Term Dynamics of Bluetongue Virus in Wild Ruminants: Relationship with Outbreaks in Livestock in Spain, 2006-2011

PubMed Central

Lorca-Oró, Cristina; López-Olvera, Jorge Ramón; Ruiz-Fons, Francisco; Acevedo, Pelayo; García-Bocanegra, Ignacio; Oleaga, Álvaro; Gortázar, Christian; Pujols, Joan

2014-01-01

Wild and domestic ruminants are susceptible to Bluetongue virus (BTV) infection. Three BTV serotypes (BTV-4, BTV-1 and BTV-8) have been detected in Spain in the last decade. Even though control strategies have been applied to livestock, BTV circulation has been frequently detected in wild ruminant populations in Spain. The aim of the present study is to assess the role for wild ruminants in maintaining BTV after the vaccination programs in livestock in mainland Spain. A total of 931 out 1,914 (48.6%) serum samples, collected from eight different wild ruminant species between 2006 and 2011, were BTV positive by ELISA. In order to detect specific antibodies against BTV-1, BTV-4 and BTV-8, positive sera were also tested by serumneutralisation test (SNT). From the ELISA positive samples that could be tested by SNT (687 out of 931), 292 (42.5%) showed neutralising antibodies against one or two BTV serotypes. For each BTV seroptype, the number of outbreaks in livestock (11,857 outbreaks in total) was modelled with pure autoregressive models and the resulting smoothed values, representing the predicted number of BTV outbreaks in livestock at municipality level, were positively correlated with BTV persistence in wild species. The strength of this relationship significantly decreased as red deer (Cervus elaphus) population abundance increased. In addition, BTV RNA was detected by real time RT-PCR in 32 out of 311 (10.3%) spleen samples from seropositive animals. Although BT outbreaks in livestock have decreased substantially after vaccination campaigns, our results indicated that wild ruminants have been exposed to BTV in territories where outbreaks in domestic animals occurred. The detection of BTV RNA and spatial association between BT outbreaks in livestock and BTV rates in red deer are consistent with the hypothesis of virus circulation and BTV maintenance within Iberian wild ruminant populations. PMID:24940879

Daily precipitation extreme events for the Iberian Peninsula and its association with Atmospheric Rivers

NASA Astrophysics Data System (ADS)

Ramos, Alexandre M.; Trigo, Ricardo M.; Liberato, Margarida LR

2014-05-01

Extreme precipitation events in the Iberian Peninsula during the extended winter months have major socio-economic impacts such as floods, landslides, extensive property damage and life losses. These events are usually associated with low pressure systems with Atlantic origin, although some extreme events in summer/autumn months can be linked to Mediterranean low pressure systems. Quite often these events are evaluated on a casuistic base and making use of data from relatively few stations. An objective method for ranking daily precipitation events is presented here based on the extensive use of the most comprehensive database of daily gridded precipitation available for the Iberian Peninsula (IB02) and spanning from 1950 to 2008, with a resolution of 0.2° (approximately 16 x 22 km at latitude 40°N), for a total of 1673 pixels. This database is based on a dense network of rain gauges, combining two national data sets, 'Spain02' for peninsular Spain and Balearic islands, and 'PT02' for mainland Portugal, with a total of more than two thousand stations over Spain and four hundred stations over Portugal, all quality-controlled and homogenized. Through this objective method for ranking daily precipitation events the magnitude of an event is obtained after considering the area affected as well as its intensity in every grid point and taking into account the daily precipitation normalised departure from climatology. Different precipitation rankings are presented considering the entire Iberian Peninsula, Portugal and also the six largest river basins in the Iberian Peninsula. Atmospheric Rivers (AR) are the water vapour (WV) core section of the broader warm conveyor belt occurring over the oceans along the warm sector of extra-tropical cyclones. They are usually W-E oriented steered by pre-frontal low level jets along the trailing cold front and subsequently feed the precipitation in the extra-tropical cyclones. They are relatively narrow regions of concentrated WV

The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

PubMed Central

Naderi, Saeid; Rezaei, Hamid-Reza; Pompanon, François; Blum, Michael G. B.; Negrini, Riccardo; Naghash, Hamid-Reza; Balkız, Özge; Mashkour, Marjan; Gaggiotti, Oscar E.; Ajmone-Marsan, Paolo; Kence, Aykut; Vigne, Jean-Denis; Taberlet, Pierre

2008-01-01

The emergence of farming during the Neolithic transition, including the domestication of livestock, was a critical point in the evolution of human kind. The goat (Capra hircus) was one of the first domesticated ungulates. In this study, we compared the genetic diversity of domestic goats to that of the modern representatives of their wild ancestor, the bezoar, by analyzing 473 samples collected over the whole distribution range of the latter species. This partly confirms and significantly clarifies the goat domestication scenario already proposed by archaeological evidence. All of the mitochondrial DNA haplogroups found in current domestic goats have also been found in the bezoar. The geographic distribution of these haplogroups in the wild ancestor allowed the localization of the main domestication centers. We found no haplotype that could have been domesticated in the eastern half of the Iranian Plateau, nor further to the east. A signature of population expansion in bezoars of the C haplogroup suggests an early domestication center on the Central Iranian Plateau (Yazd and Kerman Provinces) and in the Southern Zagros (Fars Province), possibly corresponding to the management of wild flocks. However, the contribution of this center to the current domestic goat population is rather low (1.4%). We also found a second domestication center covering a large area in Eastern Anatolia, and possibly in Northern and Central Zagros. This last domestication center is the likely origin of almost all domestic goats today. This finding is consistent with archaeological data identifying Eastern Anatolia as an important domestication center. PMID:19004765

Past, present and future distributions of an Iberian Endemic, Lepus granatensis: ecological and evolutionary clues from species distribution models.

PubMed

Acevedo, Pelayo; Melo-Ferreira, José; Real, Raimundo; Alves, Paulo Célio

2012-01-01

The application of species distribution models (SDMs) in ecology and conservation biology is increasing and assuming an important role, mainly because they can be used to hindcast past and predict current and future species distributions. However, the accuracy of SDMs depends on the quality of the data and on appropriate theoretical frameworks. In this study, comprehensive data on the current distribution of the Iberian hare (Lepus granatensis) were used to i) determine the species' ecogeographical constraints, ii) hindcast a climatic model for the last glacial maximum (LGM), relating it to inferences derived from molecular studies, and iii) calibrate a model to assess the species future distribution trends (up to 2080). Our results showed that the climatic factor (in its pure effect and when it is combined with the land-cover factor) is the most important descriptor of the current distribution of the Iberian hare. In addition, the model's output was a reliable index of the local probability of species occurrence, which is a valuable tool to guide species management decisions and conservation planning. Climatic potential obtained for the LGM was combined with molecular data and the results suggest that several glacial refugia may have existed for the species within the major Iberian refugium. Finally, a high probability of occurrence of the Iberian hare in the current species range and a northward expansion were predicted for future. Given its current environmental envelope and evolutionary history, we discuss the macroecology of the Iberian hare and its sensitivity to climate change.

Past, Present and Future Distributions of an Iberian Endemic, Lepus granatensis: Ecological and Evolutionary Clues from Species Distribution Models

PubMed Central

Acevedo, Pelayo; Melo-Ferreira, José; Real, Raimundo; Alves, Paulo Célio

2012-01-01

The application of species distribution models (SDMs) in ecology and conservation biology is increasing and assuming an important role, mainly because they can be used to hindcast past and predict current and future species distributions. However, the accuracy of SDMs depends on the quality of the data and on appropriate theoretical frameworks. In this study, comprehensive data on the current distribution of the Iberian hare (Lepus granatensis) were used to i) determine the species’ ecogeographical constraints, ii) hindcast a climatic model for the last glacial maximum (LGM), relating it to inferences derived from molecular studies, and iii) calibrate a model to assess the species future distribution trends (up to 2080). Our results showed that the climatic factor (in its pure effect and when it is combined with the land-cover factor) is the most important descriptor of the current distribution of the Iberian hare. In addition, the model’s output was a reliable index of the local probability of species occurrence, which is a valuable tool to guide species management decisions and conservation planning. Climatic potential obtained for the LGM was combined with molecular data and the results suggest that several glacial refugia may have existed for the species within the major Iberian refugium. Finally, a high probability of occurrence of the Iberian hare in the current species range and a northward expansion were predicted for future. Given its current environmental envelope and evolutionary history, we discuss the macroecology of the Iberian hare and its sensitivity to climate change. PMID:23272115

Influence of pre-cure freezing on the profile of volatile compounds during the processing of Iberian hams.

PubMed

Pérez-Palacios, Trinidad; Ruiz, Jorge; Martín, Diana; Grau, Raúl; Antequera, Teresa

2010-04-15

This work was designed to study the effect of pre-cure freezing of raw thighs from Iberian pigs on the profile of volatile compounds during the processing of hams. Generation of volatile compounds during Iberian ham processing was similar in both pre-cure frozen and refrigerated hams, the main differences being at the final stage. The levels of 2-methylbutanal, 2-methyl-1-butanol, 2,3-butanediol and 2-heptanol were significantly higher in dry-cured hams that were pre-cure frozen than in refrigerated ones, whereas the content of most detected esters was statistically lower in pre-cure frozen than in refrigerated hams. The effect of pre-cure freezing of Iberian ham on the profile of volatile compounds during ripening was not remarkable. Few differences were found in the final product, which would not greatly modify the aroma and flavour features of the dry-cured hams. (c) 2010 Society of Chemical Industry.

Lack of sex-biased dispersal promotes fine-scale genetic structure in alpine ungulates

USGS Publications Warehouse

Roffler, Gretchen H.; Talbot, Sandra L.; Luikart, Gordon; Sage, George K.; Pilgrim, Kristy L.; Adams, Layne G.; Schwartz, Michael K.

2014-01-01

Identifying patterns of fine-scale genetic structure in natural populations can advance understanding of critical ecological processes such as dispersal and gene flow across heterogeneous landscapes. Alpine ungulates generally exhibit high levels of genetic structure due to female philopatry and patchy configuration of mountain habitats. We assessed the spatial scale of genetic structure and the amount of gene flow in 301 Dall’s sheep (Ovis dalli dalli) at the landscape level using 15 nuclear microsatellites and 473 base pairs of the mitochondrial (mtDNA) control region. Dall’s sheep exhibited significant genetic structure within contiguous mountain ranges, but mtDNA structure occurred at a broader geographic scale than nuclear DNA within the study area, and mtDNA structure for other North American mountain sheep populations. No evidence of male-mediated gene flow or greater philopatry of females was observed; there was little difference between markers with different modes of inheritance (pairwise nuclear DNA F ST = 0.004–0.325; mtDNA F ST = 0.009–0.544), and males were no more likely than females to be recent immigrants. Historical patterns based on mtDNA indicate separate northern and southern lineages and a pattern of expansion following regional glacial retreat. Boundaries of genetic clusters aligned geographically with prominent mountain ranges, icefields, and major river valleys based on Bayesian and hierarchical modeling of microsatellite and mtDNA data. Our results suggest that fine-scale genetic structure in Dall’s sheep is influenced by limited dispersal, and structure may be weaker in populations occurring near ancestral levels of density and distribution in continuous habitats compared to other alpine ungulates that have experienced declines and marked habitat fragmentation.

Marine research in the Iberian Peninsula: A pledge for better times after an economic crisis

NASA Astrophysics Data System (ADS)

Borja, Angel; Marques, Joao-Carlos; Olabarria, Celia; Quintino, Victor

2013-10-01

The “17th Iberian Symposium of Marine Biology Studies” took place in San Sebastian (Spain), in September 2012. This contribution is an introduction to a special issue collating the most challenging papers submitted by Portuguese and Spanish scientists to the symposium. The text was structured as a novel, with the three main parts of a novel: (i) Setup: a historical context, from old times to the 1970's. This part presents the main Iberian scientific contribution to marine science, since the 15th Century, as a precedent to modern scientific research; (ii) Conflict: from the 1970's to the economic crisis. This part presents the evolution of Iberian research production, based upon a bibliometric study, from 1974 to 2012; and (iii) Resolution: what for the future?, which shows the main challenges, proposed by the authors, to the European research initiative 'Horizon 2020', including aspects such as the need of knowledge-base for marine management, the marine research as a potential source of jobs, the ecosystem-based approach, human activities and Marine Spatial Planning, moving from fisheries to aquaculture, or global change issues, among others.

Regional Climate Modelling of the Western Iberian Low-Level Wind Jet

NASA Astrophysics Data System (ADS)

Soares, Pedro M. M.; Lima, Daniela C. A.; Cardoso, Rita M.; Semedo, Álvaro

2016-04-01

The Iberian coastal low-level jet (CLLJ) is one the less studied boundary layer wind jet features in the Eastern Boundary Currents Systems (EBCS). These regions are amongst the most productive ocean ecosystems, where the atmosphere-land-ocean feedbacks, which include marine boundary layer clouds, coastal jets, upwelling and inland soil temperature and moisture, play an important role in defining the regional climate along the sub-tropical mid-latitude western coastal areas. Recently, the present climate western Iberian CLLJ properties were extensively described using a high resolution regional climate hindcast simulation. A summer maximum frequency of occurrence above 30% was found, with mean maximum wind speeds around 15 ms-1, between 300 and 400m heights (at the jet core). Since the 1990s the climate change impact on the EBCS is being studied, nevertheless some lack of consensus still persists regarding the evolution of upwelling and other components of the climate system in these areas. However, recently some authors have shown that changes are to be expected concerning the timing, intensity and spatial homogeneity of coastal upwelling and of CLLJs, in response to future warming, especially at higher latitudes, namely in Iberia and Canaries. In this study, the first climate change assessment study regarding the Western Iberian CLLJ, using a high resolution (9km) regional climate simulation, is presented. The properties of this CLLJ are studied and compared using two 30 years simulations: one historical simulation for the 1971-2000 period, and another simulation for future climate, in agreement with the RCP8.5 scenario, for the 2071-2100 period. Robust and consistent changes are found: 1) the hourly frequency of occurrence of the CLLJ is expected to increase in summer along the western Iberian coast, from mean maximum values of around 35% to approximately 50%; 2) the relative increase of the CLLJ frequency of occurrence is higher in the north off western Iberia

Detection of Iberian ham aroma by a semiconductor multisensorial system.

PubMed

Otero, Laura; Horrillo, M A Carmen; García, María; Sayago, Isabel; Aleixandre, Manuel; Fernández, M A Jesús; Arés, Luis; Gutiérrez, Javier

2003-11-01

A semiconductor multisensorial system, based on tin oxide, to control the quality of dry-cured Iberian hams is described. Two types of ham (submitted to different drying temperatures) were selected. Good responses were obtained from the 12 elements forming the multisensor for different operating temperatures. Discrimination between the two types of ham was successfully realised through principal component analysis (PCA).

Forecasting the effects of fertility control on overabundant ungulates: White-tailed deer in the National Capital Region

USGS Publications Warehouse

Raiho, Ann M.; Hooten, Mevin B.; Bates, Scott; Hobbs, N. Thompson

2015-01-01

Overabundant populations of ungulates have caused environmental degradation and loss of biological diversity in ecosystems throughout the world. Culling or regulated harvest is often used to control overabundant species. These methods are difficult to implement in national parks, other types of conservation reserves, or in residential areas where public hunting may be forbidden by policy. As a result, fertility control has been recommended as a non-lethal alternative for regulating ungulate populations. We evaluate this alternative using white-tailed deer in national parks in the vicinity of Washington, D.C., USA as a model system. Managers seek to reduce densities of white-tailed deer from the current average (50 deer per km2) to decrease harm to native plant communities caused by deer. We present a Bayesian hierarchical model using 13 years of population estimates from 8 national parks in the National Capital Region Network. We offer a novel way to evaluate management actions relative to goals using short term forecasts. Our approach confirms past analyses that fertility control is incapable of rapidly reducing deer abundance. Fertility control can be combined with culling to maintain a population below carrying capacity with a high probability of success. This gives managers confronted with problematic overabundance a framework for implementing management actions with a realistic assessment of uncertainty.

Forecasting the Effects of Fertility Control on Overabundant Ungulates: White-Tailed Deer in the National Capital Region.

PubMed

Raiho, Ann M; Hooten, Mevin B; Bates, Scott; Hobbs, N Thompson

2015-01-01

Overabundant populations of ungulates have caused environmental degradation and loss of biological diversity in ecosystems throughout the world. Culling or regulated harvest is often used to control overabundant species. These methods are difficult to implement in national parks, other types of conservation reserves, or in residential areas where public hunting may be forbidden by policy. As a result, fertility control has been recommended as a non-lethal alternative for regulating ungulate populations. We evaluate this alternative using white-tailed deer in national parks in the vicinity of Washington, D.C., USA as a model system. Managers seek to reduce densities of white-tailed deer from the current average (50 deer per km2) to decrease harm to native plant communities caused by deer. We present a Bayesian hierarchical model using 13 years of population estimates from 8 national parks in the National Capital Region Network. We offer a novel way to evaluate management actions relative to goals using short term forecasts. Our approach confirms past analyses that fertility control is incapable of rapidly reducing deer abundance. Fertility control can be combined with culling to maintain a population below carrying capacity with a high probability of success. This gives managers confronted with problematic overabundance a framework for implementing management actions with a realistic assessment of uncertainty.

Assessment of mammal reproduction for hunting sustainability through community-based sampling of species in the wild.

PubMed

Mayor, Pedro; El Bizri, Hani; Bodmer, Richard E; Bowler, Mark

2017-08-01

Wildlife subsistence hunting is a major source of protein for tropical rural populations and a prominent conservation issue. The intrinsic rate of natural increase. (r max ) of populations is a key reproductive parameter in the most used assessments of hunting sustainability. However, researchers face severe difficulties in obtaining reproductive data in the wild, so these assessments often rely on classic reproductive rates calculated mostly from studies of captive animals conducted 30 years ago. The result is a flaw in almost 50% of studies, which hampers management decision making. We conducted a 15-year study in the Amazon in which we used reproductive data from the genitalia of 950 hunted female mammals. Genitalia were collected by local hunters. We examined tissue from these samples to estimate birthrates for wild populations of the 10 most hunted mammals. We compared our estimates with classic measures and considered the utility of the use of r max in sustainability assessments. For woolly monkey (Lagothrix poeppigii) and tapir (Tapirus terrestris), wild birthrates were similar to those from captive populations, whereas birthrates for other ungulates and lowland-paca (Cuniculus paca) were significantly lower than previous estimates. Conversely, for capuchin monkeys (Sapajus macrocephalus), agoutis (Dasyprocta sp.), and coatis (Nasua nasua), our calculated reproductive rates greatly exceeded often-used values. Researchers could keep applying classic measures compatible with our estimates, but for other species previous estimates of r max may not be appropriate. We suggest that data from local studies be used to set hunting quotas. Our maximum rates of population growth in the wild correlated with body weight, which suggests that our method is consistent and reliable. Integration of this method into community-based wildlife management and the training of local hunters to record pregnancies in hunted animals could efficiently generate useful information of life

The use of normalized climatological anomalies to rank precipitation events in the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Ramos, Alexandre M.; Trigo, Ricardo M.; Liberato, Margarida L. R.

2013-04-01

Extreme precipitation events in the Iberian Peninsula during winter months have major socio-economic impacts such as flooding, landslides, extensive property damage and life losses, and are usually associated to deep low pressure systems with Atlantic origin, although some extreme events in summer/autumn months are fed by the Mediterranean. Quite often these events are evaluated on a casuistic base and with relatively few stations. An objective method for ranking daily precipitation events is presented based on the extensive use of the most comprehensive database of daily precipitation available for the Iberian Peninsula (IB02) and spanning from 1950 to 2003, with a resolution of 0.2° (approximately 16 x 22 km at latitude 40°N), for a total of 1673 pixels. This database is based on a dense network of rain gauges, combining two national data sets, 'Spain02' for peninsular Spain and Balearic islands (Herrera et al., 2012), and 'PT02' for mainland Portugal (Belo-Pereira et al., 2011), with a total of more than two thousand stations over Spain and four hundred stations over Portugal, all quality-controlled and homogenized. The daily precipitation data from 1950 to 2003 are compared with a 30-year (1961-90) precipitation climatology to achieve a daily normalized departure from the climatology. The magnitude of an event is given daily by an index that is obtained after multiplying 1) the area (in percentage) that has precipitation anomalies above two standard deviations by 2) the mean values of these anomalies over this area. With this criterion we are able to evaluate not only the spatial extent of the precipitation events but also their spatially integrated intensity. In addition, to stress out the hydrological responses to precipitation, rankings taking into account the sum of the normalized anomalies over different time periods (3 days, 5 days and 10 days) were also computed. Here different precipitation rankings will be presented considering the entire Iberian

Acid mine drainage in the Iberian Pyrite Belt: 1. Hydrochemical characteristics and pollutant load of the Tinto and Odiel rivers.

PubMed

Nieto, Jose M; Sarmiento, Aguasanta M; Canovas, Carlos R; Olias, Manuel; Ayora, Carlos

2013-11-01

Acid mine drainage in the Iberian Pyrite Belt is probably the worst case in the world of surface water pollution associated with mining of sulphide mineral deposits. The Iberian Pyrite Belt is located in SW Iberian Peninsula, and it has been mined during the last 4,500 years. The central and eastern part of the Iberian Pyrite Belt is drained by the Tinto and Odiel rivers, which receive most of the acidic leachates from the mining areas. As a result, the main channels of the Tinto and Odiel rivers are very rich in metals and highly acidic until reaching the Atlantic Ocean. A significant amount of the pollutant load transported by these two rivers is delivered during the rainy season, as is usual in rivers of Mediterranean climate regions. Therefore, in order to have an accurate estimation of the pollutant loads transported by the Tinto and Odiel rivers, a systematic sampling on a weekly basis and a high temporal resolution sampling of floods events were both performed. Results obtained show that metal fluxes are strongly dependent on the study period, highlighting the importance of inter-annual studies involving dry and wet years.

Effects of myxoma virus and rabbit hemorrhagic disease virus on the physiological condition of wild European rabbits: Is blood biochemistry a useful monitoring tool?

PubMed

Pacios-Palma, Isabel; Santoro, Simone; Bertó-Moran, Alejandro; Moreno, Sacramento; Rouco, Carlos

2016-12-01

Myxomatosis and rabbit hemorrhagic disease (RHD) are the major viral diseases that affect the wild European rabbit (Oryctolagus cuniculus). These diseases arrived in Europe within the last decades and have caused wild rabbit populations to decline dramatically. Both viruses are currently considered to be endemic in the Iberian Peninsula; periodic outbreaks that strongly impact wild populations regularly occur. Myxoma virus (MV) and rabbit hemorrhagic disease virus (RHDV) alter the physiology of infected rabbits, resulting in physical deterioration. Consequently, the persistence and viability of natural populations are affected. The main goal of our study was to determine if blood biochemistry is correlated with serostatus in wild European rabbits. We carried out seven live-trapping sessions in three wild rabbit populations over a two-year period. Blood samples were collected to measure anti-MV and anti-RHDV antibody concentrations and to measure biochemical parameters related to organ function, protein metabolism, and nutritional status. Overall, we found no significant relationships between rabbit serostatus and biochemistry. Our main result was that rabbits that were seropositive for both MV and RHDV had low gamma glutamyltransferase concentrations. Given the robustness of our analyses, the lack of significant relationships may indicate that the biochemical parameters measured are poor proxies for serostatus. Another explanation is that wild rabbits might be producing attenuated physiological responses to these viruses because the latter are now enzootic in the study area. Copyright © 2016 Elsevier Ltd. All rights reserved.

Integrated Analysis of Climate, Soil, Topography and Vegetative Growth in Iberian Viticultural Regions

PubMed Central

Fraga, Helder; Malheiro, Aureliano C.; Moutinho-Pereira, José; Cardoso, Rita M.; Soares, Pedro M. M.; Cancela, Javier J.; Pinto, Joaquim G.; Santos, João A.

2014-01-01

The Iberian viticultural regions are convened according to the Denomination of Origin (DO) and present different climates, soils, topography and management practices. All these elements influence the vegetative growth of different varieties throughout the peninsula, and are tied to grape quality and wine type. In the current study, an integrated analysis of climate, soil, topography and vegetative growth was performed for the Iberian DO regions, using state-of-the-art datasets. For climatic assessment, a categorized index, accounting for phenological/thermal development, water availability and grape ripening conditions was computed. Soil textural classes were established to distinguish soil types. Elevation and aspect (orientation) were also taken into account, as the leading topographic elements. A spectral vegetation index was used to assess grapevine vegetative growth and an integrated analysis of all variables was performed. The results showed that the integrated climate-soil-topography influence on vine performance is evident. Most Iberian vineyards are grown in temperate dry climates with loamy soils, presenting low vegetative growth. Vineyards in temperate humid conditions tend to show higher vegetative growth. Conversely, in cooler/warmer climates, lower vigour vineyards prevail and other factors, such as soil type and precipitation acquire more important roles in driving vigour. Vines in prevailing loamy soils are grown over a wide climatic diversity, suggesting that precipitation is the primary factor influencing vigour. The present assessment of terroir characteristics allows direct comparison among wine regions and may have great value to viticulturists, particularly under a changing climate. PMID:25251495

Integrated analysis of climate, soil, topography and vegetative growth in Iberian viticultural regions.

PubMed

Fraga, Helder; Malheiro, Aureliano C; Moutinho-Pereira, José; Cardoso, Rita M; Soares, Pedro M M; Cancela, Javier J; Pinto, Joaquim G; Santos, João A

2014-01-01

The Iberian viticultural regions are convened according to the Denomination of Origin (DO) and present different climates, soils, topography and management practices. All these elements influence the vegetative growth of different varieties throughout the peninsula, and are tied to grape quality and wine type. In the current study, an integrated analysis of climate, soil, topography and vegetative growth was performed for the Iberian DO regions, using state-of-the-art datasets. For climatic assessment, a categorized index, accounting for phenological/thermal development, water availability and grape ripening conditions was computed. Soil textural classes were established to distinguish soil types. Elevation and aspect (orientation) were also taken into account, as the leading topographic elements. A spectral vegetation index was used to assess grapevine vegetative growth and an integrated analysis of all variables was performed. The results showed that the integrated climate-soil-topography influence on vine performance is evident. Most Iberian vineyards are grown in temperate dry climates with loamy soils, presenting low vegetative growth. Vineyards in temperate humid conditions tend to show higher vegetative growth. Conversely, in cooler/warmer climates, lower vigour vineyards prevail and other factors, such as soil type and precipitation acquire more important roles in driving vigour. Vines in prevailing loamy soils are grown over a wide climatic diversity, suggesting that precipitation is the primary factor influencing vigour. The present assessment of terroir characteristics allows direct comparison among wine regions and may have great value to viticulturists, particularly under a changing climate.

Reliability of an ELISA test for diagnosing oestrosis in Iberian ibex.

PubMed

Arias, María Sol; Moreno, Virginia; Sarasa, Mathieu; Paz-Silva, Adolfo; Sánchez-Andrade, Rita; Morrondo, Patrocinio; Díez-Baños, Pablo; Granados, José E; Sánchez, Antonio; Pérez, Jesús M

2014-04-01

Oestrosis is one of the most prevalent parasitosis affecting the Iberian ibex, Capra pyrenaica . To date, both the diagnosis of oestrosis and the determination of the intensity of parasitism require the use of invasive methods (necropsy), which necessarily limit research possibilities. We analyzed the immune humoral response (IgM and IgG) against Oestrus ovis L. excretory/secretory larval antigens in 32 sera taken from Iberian ibex from the Sierra Nevada Natural Space (southern Spain). Three antigens were collected: L1OES (from L1 larvae), L2OES (L2), and L3OES (L3). Necropsy was considered as the gold standard. The percentage of ibexes harboring Oestrus spp. larvae was 88%, the mean intensity of parasitism being 16.96 ± 14.96 larvae per parasitized host (range: 2-52). In our sample, first-instar larvae (L1) were found in 9% of ibexes, while 69% of hosts carried L2 larvae and 88% L3 larvae. Positive correlations between L1 and L2 numbers, and between L2 and L3 numbers were detected. The best results with the immunoenzymatic assay were obtained using IgG antibodies against the L1OES antigens (specificity = 89%; sensitivity = 100%; positive predictive value = 100%; negative predictive value = 57%). The IgG seroprevalence against L1OES was 78%. Thus, the analysis of IgG antibodies against antigens collected from L1 O. ovis larvae would seem to be a noninvasive method for reliably diagnosing oestrosis in naturally infested Iberian ibex. Nevertheless, additional immunological and methodological advances are still required because false positive and false negative results still represent a non-negligible part of the results of the ELISA tests.

Ecophysiology Tracks Phylogeny and Meets Ecological Models in an Iberian Gecko.

PubMed

Rato, C; Carretero, M A

2015-01-01

Because fitness of ectotherms, including reptiles, is highly dependent on temperature and water availability, the study of ecophysiological traits, such as preferred temperature (T p) and water loss rates (WLRs), may provide mechanistic evidence on the restricting factors to the species ranges. The Moorish gecko, Tarentola mauritanica, is a species complex with a circum-Mediterranean distribution. In the Iberian Peninsula, two sister parapatric forms of the complex, known as the Iberian and the European clades, are found. Ecological models previously performed using presence records and bioclimatic variables suggest niche divergence between both lineages correlated with precipitation rather than with temperature. In this study, we test this correlative hypothesis using ecophysiological evidence. In the laboratory, we analyzed the T p and WLRs for 84 adult males from seven distinct populations ascribed to one of the two lineages present in Iberia. Specifically, we evaluated the existence of trait conservatism versus adaptation among populations, lineages, or both. In addition, we tested for a trade-off between water and thermal traits and assessed whether climate regime of sampling localities had any influence on the ecophysiological patterns found. We found that T p is quite conserved at both the population and lineage levels and independent from body size. In contrast, water loss experiments revealed some variation among populations, but the regression analysis failed to detect correlation between T p and WLR at any level. Overall, the European lineage displayed a trend for higher water loss and was more diverse among populations when compared with the Iberian lineage. The lack of correspondence between ecophysiological traits and local climatic conditions favors phylogenetic signal versus adaptation. This suggests divergent evolutionary responses to the environment, mainly acting on water ecology, in both lineages, which may account for the differences in their

Mesozoic and Cenozoic exhumation history of the SW Iberian Variscides inferred from low-temperature thermochronology

NASA Astrophysics Data System (ADS)

Vázquez-Vílchez, Mercedes; Jabaloy-Sánchez, Antonio; Azor, Antonio; Stuart, Finlay; Persano, Cristina; Alonso-Chaves, Francisco M.; Martín-Parra, Luis Miguel; Matas, Jerónimo; García-Navarro, Encarnación

2015-11-01

The post-Paleozoic tectonothermal evolution of the SW Iberian Variscides is poorly known mainly due to the scarce low-temperature geochronological data available. We have obtained new apatite fission-tracks and apatite (U-Th)/He ages to constrain the Mesozoic and Cenozoic tectonic evolution of this portion of the Iberian Massif located just north of the Betic-Rif Alpine orogen. We have obtained nine apatite fission-track ages on samples from Variscan and pre-Variscan granitoids. These ages range from 174.4 (± 10.8) to 54.1 (± 4.9) Ma, with mean track lengths between 10.3 and 13.9 μm. We have also performed 5 (U-Th)/He datings on some of the same samples, obtaining ages between 74.6 (± 1.6) and 18.5 (± 1.4) Ma. Time-temperature path modeling of these low-temperature geochronological data leads us to envisage four post-Paleozoic tectonically controlled exhumation episodes in the SW Iberian Variscides. Three of these episodes occurred in Mesozoic times (Middle Triassic to Early Jurassic, Early Cretaceous, and Late Cretaceous) at rates of ≈ 1.1 to 2.5 °C Ma- 1, separated by periods with almost no cooling. We relate these Mesozoic cooling events to the formation of important marginal reliefs during the rifting and opening of the central and northern Atlantic realm. The fourth exhumation episode occurred in Cenozoic times at rates of ≈ 3.2 to 3.6 °C Ma- 1, being only recorded in samples next to faults with topographic escarpments. These samples cooled below 80 °C at ≈ 20 Ma at rates of 3-13 °C Ma- 1 due to roughly N-S oriented compressional stresses affecting the whole Iberian plate, which, in the particular case of SW Iberia, reactivated some of the previous Late Paleozoic thrusts.

Characterization of Staphylococcus spp. and Micrococcus spp. isolated from Iberian ham throughout the ripening process.

PubMed

Rodríguez, M; Núñez, F; Córdoba, J J; Sanabria, C; Bermúdez, E; Asensio, M A

1994-12-01

The Iberian dry cured ham is an uncooked meat product highly appreciated because of its characteristic flavour. This product is obtained from highly marbled Iberian pig hindlegs after 18-24 months of maturation under natural environmental conditions. The role of Micrococcaceae in the development of the aroma characteristics of this products remains unclear. Identification of Gram-positive, catalase-positive cocci isolated from Mannitol Salt Agar plates showed that Staphylococcus xylosus followed by Staphylococcus equorum are the predominant organisms, even after 16 months of maturing. A remarkable variety of types of both staphylococci and micrococci are detected at any sampling time. The metabolic activities of these organisms could contribute to the characteristics of the final product.

The Galicia-Ossa-Morena Zone: Proposal for a new zone of the Iberian Massif. Variscan implications

NASA Astrophysics Data System (ADS)

Arenas, Ricardo; Díez Fernández, Rubén; Rubio Pascual, Francisco J.; Sánchez Martínez, Sonia; Martín Parra, Luis Miguel; Matas, Jerónimo; González del Tánago, José; Jiménez-Díaz, Alberto; Fuenlabrada, Jose M.; Andonaegui, Pilar; Garcia-Casco, Antonio

2016-06-01

Correlation of a group of allochthonous terranes (referred to as basal, ophiolitic and upper units) exposed in the NW and SW of the Iberian Massif, is used to propose a new geotectonic zone in the southern branch of the Variscan Orogen: the Galicia-Ossa-Morena Zone. Recent advances in SW Iberia identify most of the former Ossa-Morena Zone as another allochthonous complex of the Iberian Massif, the Ossa-Morena Complex, equivalent to the Cabo Ortegal, Órdenes, Malpica-Tui, Bragança and Morais complexes described in NW Iberia. The new geotectonic zone and its counterparts along the rest of the Variscan Orogen constitute an Internal Variscan Zone with ophiolites and units affected by high-P metamorphism. The Galicia-Ossa-Morena Zone includes a Variscan suture and pieces of continental crust bearing the imprint of Ediacaran-Cambrian events related to the activity of peri-Gondwanan magmatic arcs (Cadomian orogenesis). In the Iberian Massif, the general structure of this geotectonic zone represents a duplication of the Gondwanan platform, the outboard sections being juxtaposed on top of domains located closer to the mainland before amalgamation. This interpretation offers an explanation that overcomes some issues regarding the differences between the stratigraphic and paleontological record of the central and southern sections of the Iberian Massif. Also, equivalent structural relationships between other major geotectonic domains of the rest of the Variscan Orogen are consistent with our interpretation and allow suspecting similar configurations along strike of the orogen. A number of issues may be put forward in this respect that potentially open new lines of thinking about the architecture of the Variscan Orogen.

Synlophe Structure in Pseudomarshallagia elongata (Nematoda: Trichostrongyloidea), Abomasal Parasites Among Ethiopian Ungulates, with Consideration of Other Morphological Attributes and Differentiation within the Osteragiinae

USDA-ARS?s Scientific Manuscript database

The independence of the genus Pseudomarshallagia and its placement among the medium stomach worms of ungulates, Ostertagiinae, is confirmed based on comparative morphological studies of the synlophe and genital attributes among male and female specimens. An emended description of P. elongata is pres...

Increasing sea surface temperature and range shifts of intertidal gastropods along the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Rubal, Marcos; Veiga, Puri; Cacabelos, Eva; Moreira, Juan; Sousa-Pinto, Isabel

2013-03-01

There are well-documented changes in abundance and geographical range of intertidal invertebrates related to climate change at north Europe. However, the effect of sea surface warming on intertidal invertebrates has been poorly studied at lower latitudes. Here we analyze potential changes in the abundance patterns and distribution range of rocky intertidal gastropods related to climate change along the Iberian Peninsula. To achieve this aim, the spatial distribution and range of sub-tropical, warm- and cold-water species of intertidal gastropods was explored by a fully hierarchical sampling design considering four different spatial scales, i.e. from region (100 s of km apart) to quadrats (ms apart). Variability on their patterns of abundance was explored by analysis of variance, changes on their distribution ranges were detected by comparing with previous records and their relationship with sea water temperature was explored by rank correlation analyses. Mean values of sea surface temperature along the Iberian coast, between 1949 and 2010, were obtained from in situ data compiled for three different grid squares: south Portugal, north Portugal, and Galicia. Lusitanian species did not show significant correlation with sea water temperature or changes on their distributional range or abundance, along the temperature gradient considered. The sub-tropical species Siphonaria pectinata has, however, increased its distribution range while boreal cold-water species showed the opposite pattern. The latter was more evident for Littorina littorea that was almost absent from the studied rocky shores of the Iberian Peninsula. Sub-tropical and boreal species showed significant but opposite correlation with sea water temperature. We hypothesized that the energetic cost of frequent exposures to sub-lethal temperatures might be responsible for these shifts. Therefore, intertidal gastropods at the Atlantic Iberian Peninsula coast are responding to the effect of global warming as it

The phylogeographical history of the Iberian steppe plant Ferula loscosii (Apiaceae): a test of the abundant-centre hypothesis.

PubMed

Pérez-Collazos, E; Sanchez-Gómez, P; Jiménez, F; Catalán, P

2009-03-01

The geology and climate of the western Mediterranean area were strongly modified during the Late Tertiary and the Quaternary. These geological and climatic events are thought to have induced changes in the population histories of plants in the Iberian Peninsula. However, fine-scale genetic spatial architecture across western Mediterranean steppe plant refugia has rarely been investigated. A population genetic analysis of amplified fragment length polymorphism variation was conducted on present-day, relict populations of Ferula loscosii (Apiaceae). This species exhibits high individual/population numbers in the middle Ebro river valley and, according to the hypothesis of an abundant-centre distribution, these northern populations might represent a long-standing/ancestral distribution centre. However, our results suggest that the decimated southern and central Iberian populations are more variable and structured than the northeastern ones, representing the likely vestiges of an ancestral distribution centre of the species. Phylogeographical analysis suggests that F. loscosii likely originated in southern Spain and then migrated towards the central and northeastern ranges, further supporting a Late Miocene southern-bound Mediterranean migratory way for its oriental steppe ancestors. In addition, different glacial-induced conditions affected the southern and northern steppe Iberian refugia during the Quaternary. The contrasting genetic homogeneity of the Ebro valley range populations compared to the southern Iberian ones possibly reflects more severe bottlenecks and subsequent genetic drift experienced by populations of the northern Iberia refugium during the Pleistocene, followed by successful postglacial expansion from only a few founder plants.

Alternative foraging strategies enable a mountain ungulate to persist after migration loss

USGS Publications Warehouse

Courtemanch, Alyson B.; Kauffman, Matthew J.; Kilpatrick, Steve; Dewey, Sarah R.

2017-01-01

The persistence of many migratory ungulate populations worldwide is threatened due to anthropogenic impacts to seasonal ranges and migration routes. While many studies have linked migratory ungulate declines to migration disruption or loss, very few have explored the underlying factors that determine whether a population perishes or persists. In some cases, populations undergo severe declines and extirpation after migration loss; however, others appear able to persist as residents. We predict that to persist, populations must replace the traditional benefits of migration by altering the foraging strategies they employ as residents within one seasonal range. We propose the alternative foraging strategies (AFS) hypothesis as a framework for identifying various behavioral strategies that populations may use to cope with migration loss. We tested the hypothesis using the formerly migratory Teton bighorn sheep population in northwest Wyoming, which ceased migrating over 60 yr ago, but has persisted as a resident population. We used global positioning system data to evaluate winter and summer habitat selection and seasonal elevational movements for 28 adult female bighorn sheep (Ovis canadensis) from 2008 to 2010. Resource selection functions revealed that bighorn sheep employ winter foraging strategies to survive as residents by seeking out rugged, high-elevation, windswept ridgelines. Seasonal movement analyses indicated that bighorn sheep undergo a newly documented “abbreviated migration” strategy that is closely synchronized with vegetation green-up patterns within their one range. Bighorn sheep descend 500 m in elevation and travel up to 10 km in spring, gaining access to newly emergent forage approximately 30 d before it appears on their high-elevation winter and summer ranges. Our findings indicate that the Teton bighorn sheep population has persisted due to its habitat selection, AFS, and unique movement patterns, which allow migration loss to be mediated

Males and Females Contribute Unequally to Offspring Genetic Diversity in the Polygynandrous Mating System of Wild Boar

PubMed Central

Pérez-González, Javier; Costa, Vânia; Santos, Pedro; Slate, Jon; Carranza, Juan; Fernández-Llario, Pedro; Zsolnai, Attila; Monteiro, Nuno M.; Anton, István; Buzgó, József; Varga, Gyula; Beja-Pereira, Albano

2014-01-01

The maintenance of genetic diversity across generations depends on both the number of reproducing males and females. Variance in reproductive success, multiple paternity and litter size can all affect the relative contributions of male and female parents to genetic variation of progeny. The mating system of the wild boar (Sus scrofa) has been described as polygynous, although evidence of multiple paternity in litters has been found. Using 14 microsatellite markers, we evaluated the contribution of males and females to genetic variation in the next generation in independent wild boar populations from the Iberian Peninsula and Hungary. Genetic contributions of males and females were obtained by distinguishing the paternal and maternal genetic component inherited by the progeny. We found that the paternally inherited genetic component of progeny was more diverse than the maternally inherited component. Simulations showed that this finding might be due to a sampling bias. However, after controlling for the bias by fitting both the genetic diversity in the adult population and the number of reproductive individuals in the models, paternally inherited genotypes remained more diverse than those inherited maternally. Our results suggest new insights into how promiscuous mating systems can help maintain genetic variation. PMID:25541986

Surveillance of Bovine Tuberculosis and Risk Estimation of a Future Reservoir Formation in Wildlife in Switzerland and Liechtenstein

PubMed Central

Schöning, Janne Marie; Cerny, Nadine; Prohaska, Sarah; Wittenbrink, Max M.; Smith, Noel H.; Bloemberg, Guido; Pewsner, Mirjam; Schiller, Irene; Origgi, Francesco C.; Ryser-Degiorgis, Marie-Pierre

2013-01-01

Bovine tuberculosis (bTB) caused by Mycobacterium bovis or M. caprae has recently (re-) emerged in livestock and wildlife in all countries bordering Switzerland (CH) and the Principality of Liechtenstein (FL). Comprehensive data for Swiss and Liechtenstein wildlife are not available so far, although two native species, wild boar (Sus scrofa) and red deer (Cervus elaphus elaphus), act as bTB reservoirs elsewhere in continental Europe. Our aims were (1) to assess the occurrence of bTB in these wild ungulates in CH/FL and to reinforce scanning surveillance in all wild mammals; (2) to evaluate the risk of a future bTB reservoir formation in wild boar and red deer in CH/FL. Tissue samples collected from 2009 to 2011 from 434 hunted red deer and wild boar and from eight diseased ungulates with tuberculosis-like lesions were tested by direct real-time PCR and culture to detect mycobacteria of the Mycobacterium tuberculosis complex (MTBC). Identification of suspicious colonies was attempted by real-time PCR, genotyping and spoligotyping. Information on risk factors for bTB maintenance within wildlife populations was retrieved from the literature and the situation regarding identified factors was assessed for our study areas. Mycobacteria of the MTBC were detected in six out of 165 wild boar (3.6%; 95% CI: 1.4–7.8) but none of the 269 red deer (0%; 0–1.4). M. microti was identified in two MTBC-positive wild boar, while species identification remained unsuccessful in four cases. Main risk factors for bTB maintenance worldwide, including different causes of aggregation often resulting from intensive wildlife management, are largely absent in CH and FL. In conclusion, M. bovis and M. caprae were not detected but we report for the first time MTBC mycobacteria in Swiss wild boar. Present conditions seem unfavorable for a reservoir emergence, nevertheless increasing population numbers of wild ungulates and offal consumption may represent a risk. PMID:23349839

How immunogenetically different are domestic pigs from wild boars: a perspective from single-nucleotide polymorphisms of 19 immunity-related candidate genes.

PubMed

Chen, Shanyuan; Gomes, Rui; Costa, Vânia; Santos, Pedro; Charneca, Rui; Zhang, Ya-ping; Liu, Xue-hong; Wang, Shao-qing; Bento, Pedro; Nunes, Jose-Luis; Buzgó, József; Varga, Gyula; Anton, István; Zsolnai, Attila; Beja-Pereira, Albano

2013-10-01

The coexistence of wild boars and domestic pigs across Eurasia makes it feasible to conduct comparative genetic or genomic analyses for addressing how genetically different a domestic species is from its wild ancestor. To test whether there are differences in patterns of genetic variability between wild and domestic pigs at immunity-related genes and to detect outlier loci putatively under selection that may underlie differences in immune responses, here we analyzed 54 single-nucleotide polymorphisms (SNPs) of 19 immunity-related candidate genes on 11 autosomes in three pairs of wild boar and domestic pig populations from China, Iberian Peninsula, and Hungary. Our results showed no statistically significant differences in allele frequency and heterozygosity across SNPs between three pairs of wild and domestic populations. This observation was more likely due to the widespread and long-lasting gene flow between wild boars and domestic pigs across Eurasia. In addition, we detected eight coding SNPs from six genes as outliers being under selection consistently by three outlier tests (BayeScan2.1, FDIST2, and Arlequin3.5). Among four non-synonymous outlier SNPs, one from TLR4 gene was identified as being subject to positive (diversifying) selection and three each from CD36, IFNW1, and IL1B genes were suggested as under balancing selection. All of these four non-synonymous variants were predicted as being benign by PolyPhen-2. Our results were supported by other independent lines of evidence for positive selection or balancing selection acting on these four immune genes (CD36, IFNW1, IL1B, and TLR4). Our study showed an example applying a candidate gene approach to identify functionally important mutations (i.e., outlier loci) in wild and domestic pigs for subsequent functional experiments.

Drought trends in the Iberian Peninsula over the last 112 years

NASA Astrophysics Data System (ADS)

Gouveia, Célia M.; Ramos, Patrícia; Russo, Ana; Trigo, Ricardo M.

2015-04-01

The Iberian Peninsula is often affected by drought events with strong influences in ecosystems and the related social and economic impacts (Gouveia et al. 2012, Trigo et al., 2013). In the last decades the severity of droughts in Iberia have increased due to the higher atmospheric evaporative demand (Vicente-Serrano et al., 2014). The need for a deeper knowledge of drought frequency, duration and intensity over the Iberian Peninsula during the last 112 years is reinforced by the findings showing that the period of 1970-2010 over the Mediterranean region was considered drier when compared with 1901-1970. Together with the increasing dryness, the projections point for an increase of drought conditions during the twenty-first century (Hoerling et al., 2012) will tend to exacerbate these problems. The evolution of drought in the Iberian Peninsula was analyzed, using the Standardized Precipitation Evapotranspiration Index (SPEI) and the Standardized Precipitation Index (SPI), for the period 1901-2012, and the sub-periods 1901-1937, 1938-1974 and 1975-2012. We have used SPI and SPEI for the time scale of 12 months, as obtained from CRU TS3.21 database between 1901 and 2012, using a spatial resolution of 0.5°. The drought indices were analyzed in order to identify significant trends during the entire period and sub-periods. Trends in annual precipitation and PET were also performed. Drought's duration, magnitude and time spanned between drought events were computed. SPI and SPEI significant trends show areas with opposite signals in the period 1901-2012, following precipitation patterns. Precipitation trends are significant and positive in the Northwestern region of the IP, and significant and negative in the Southern areas. SPEI identified dryer conditions and an increase in the area affected by droughts, which is in agreement with the increase in PET on the majority of the territory. The same spatial differences were identified in the drought duration, magnitude and

Transient response of the Northwestern Iberian upwelling regime.

PubMed

Ferreira Cordeiro, Nuno Gonçalo; Dubert, Jesus; Nolasco, Rita; Desmond Barton, Eric

2018-01-01

The hydrography and dynamics of NW Iberian margin were explored for July 2009, based on a set of in situ and remote sensing observations. Zonal sections of standard CTD casts, towed CTD (SeaSoar), Acoustic Doppler Current Profilers (ADCP) and Lagrangian surveys were made to characterize cycles of upwelling and relaxation in this region. Two periods of northerly winds, bounded by relaxation periods, were responsible for the formation of an upwelling front extending to the shelf edge. An equatorward flow was quickly set up on the shelf responding to the northerly wind pulses. South of Cape Silleiro, the development and subsequent relaxation of an upwelling event was intensively surveyed in the shelf, following a Lagrangian drifter transported by the upwelling jet. This region is part of an upwelling center extending from Cape Silleiro to Porto, where the surface temperature was colder than the neighboring regions, under upwelling favorable winds. As these winds relaxed, persistent poleward flow developed, originating south of the upwelling center and consisting in an inner-shelf tongue of warm waters. During an event of strong southerly wind, the poleward flow was observed to extend to the whole continental shelf. Although the cruise was executed during summertime, the presence of river-plumes was observed over the shelf. The interaction of the plumes with the circulation on the shelf was also described in terms of coastal convergence and offshore advection. The sampling of the offshore and slope regions showed the presence of the Iberian poleward current offshore and a persistent equatorward flow over the upper slope.

Factors that Influence Mycobacterium bovis Infection in Red Deer and Wild Boar in an Epidemiological Risk Area for Tuberculosis of Game Species in Portugal.

PubMed

Madeira, S; Manteigas, A; Ribeiro, R; Otte, J; Fonseca, A Pina; Caetano, P; Abernethy, D; Boinas, F

2017-06-01

Bovine tuberculosis (bTB) is a worldwide zoonotic disease of domestic and wild animals. Eradication has proved elusive in those countries with intensive national programmes but with ongoing transmission between wildlife and cattle. In Portugal, a high-risk area for bTB was defined and specific measures implemented to assess and minimize the risk from wildlife. Data from the 2011 to 2014 hunting seasons for red deer (Cervus elaphus) and wild boar (Sus scrofa) were analysed with bovine demographic and bTB information to assess factors that determined the occurrence and distribution of bTB in both species. The likelihood of bTB-like lesions in wild boar was positively associated with density of red deer, wild boar and cattle, while for red deer, only their density and age were significant factors. The likelihood of Mycobacterium bovis isolation in wild boar was associated with density of cattle and red deer and also with the anatomical location of lesions, while for red deer, none of the variables tested were statistically significant. Our results suggest that, in the study area, the role of red deer and wild boar may be different from the one previously suggested by other authors for the Iberian Peninsula, as red deer may be the driving force behind M. bovis transmission to wild boar. These findings may assist the official services and game managing bodies for the management of hunting zones, what could also impact the success of the bTB eradication programme. © 2015 Blackwell Verlag GmbH.

Characterization of phenolic compounds in flowers of wild medicinal plants from Northeastern Portugal.

PubMed

Barros, Lillian; Dueñas, Montserrat; Carvalho, Ana Maria; Ferreira, Isabel C F R; Santos-Buelga, Celestino

2012-05-01

Crataegus monogyna, Cytisus multiflorus, Malva sylvestris and Sambucus nigra have been used as important medicinal plants in the Iberian Peninsula since a long time ago, and are claimed to have various health benefits. This study aimed to determine the phenolic profile and composition of wild medicinal flowers of those species. The analysis was performed by HPLC-DAD-ESI/MS. Flavonoids, and particularly flavonols and flavones, were the main groups in almost all the studied samples. C. multiflorus sample gave the highest levels of total flavonoids (54.5 mg/gdw), being a chrysin derivative the most abundant flavone found (22.3 mg/gdw). C. monogyna revealed the highest concentration in phenolic acids (5.5 mg/gdw) that were not found in C. multiflorus sample; 5-O-caffeoylquinic acid was the most abundant phenolic acid found in the first species, being a procyanidin trimer also found (1.4 mg/gdw). Kaempferol-3-O-rutinoside (0.84 mg/gdw) and quercetin-3-O-rutinoside (14.9 mg/gdw) were the main flavonols present in M. sylvestris and S. nigra, respectively. Due to the well established antioxidant activity of phenolic compounds, the studied wild medicinal flowers could be selected for processing extracts with health-promoting properties or to be incorporate into functional beverages or products with bioactive properties related to oxidative stress. Copyright © 2012 Elsevier Ltd. All rights reserved.

Revisiting the Iberian honey bee (Apis mellifera iberiensis) contact zone: maternal and genome-wide nuclear variations provide support for secondary contact from historical refugia.

PubMed

Chávez-Galarza, Julio; Henriques, Dora; Johnston, J Spencer; Carneiro, Miguel; Rufino, José; Patton, John C; Pinto, M Alice

2015-06-01

Dissecting diversity patterns of organisms endemic to Iberia has been truly challenging for a variety of taxa, and the Iberian honey bee is no exception. Surveys of genetic variation in the Iberian honey bee are among the most extensive for any honey bee subspecies. From these, differential and complex patterns of diversity have emerged, which have yet to be fully resolved. Here, we used a genome-wide data set of 309 neutrally tested single nucleotide polymorphisms (SNPs), scattered across the 16 honey bee chromosomes, which were genotyped in 711 haploid males. These SNPs were analysed along with an intergenic locus of the mtDNA, to reveal historical patterns of population structure across the entire range of the Iberian honey bee. Overall, patterns of population structure inferred from nuclear loci by multiple clustering approaches and geographic cline analysis were consistent with two major clusters forming a well-defined cline that bisects Iberia along a northeastern-southwestern axis, a pattern that remarkably parallels that of the mtDNA. While a mechanism of primary intergradation or isolation by distance could explain the observed clinal variation, our results are more consistent with an alternative model of secondary contact between divergent populations previously isolated in glacial refugia, as proposed for a growing list of other Iberian taxa. Despite current intense honey bee management, human-mediated processes have seemingly played a minor role in shaping Iberian honey bee genetic structure. This study highlights the complexity of the Iberian honey bee patterns and reinforces the importance of Iberia as a reservoir of Apis mellifera diversity. © 2015 John Wiley & Sons Ltd.

Wear Fast, Die Young: More Worn Teeth and Shorter Lives in Iberian Compared to Scottish Red Deer

PubMed Central

Pérez-Barbería, F. J.; Carranza, J.; Sánchez-Prieto, C.

2015-01-01

Teeth in Cervidae are permanent structures that are not replaceable or repairable; consequently their rate of wear, due to the grinding effect of food and dental attrition, affects their duration and can determine an animal's lifespan. Tooth wear is also a useful indicator of accumulative life energy investment in intake and mastication and their interactions with diet. Little is known regarding how natural and sexual selection operate on dental structures within a species in contrasting environments and how these relate to life history traits to explain differences in population rates of tooth wear and longevity. We hypothesised that populations under harsh environmental conditions should be selected for more hypsodont teeth while sexual selection may maintain similar sex differences within different populations. We investigated the patterns of tooth wear in males and females of Iberian red deer (Cervus elaphus hispanicus) in Southern Spain and Scottish red deer (C. e. scoticus) across Scotland, that occur in very different environments, using 10343 samples from legal hunting activities. We found higher rates of both incisor and molar wear in the Spanish compared to Scottish populations. However, Scottish red deer had larger incisors at emergence than Iberian red deer, whilst molars emerged at a similar size in both populations and sexes. Iberian and Scottish males had earlier tooth depletion than females, in support of a similar sexual selection process in both populations. However, whilst average lifespan for Iberian males was 4 years shorter than that for Iberian females and Scottish males, Scottish males only showed a reduction of 1 year in average lifespan with respect to Scottish females. More worn molars were associated with larger mandibles in both populations, suggesting that higher intake and/or greater investment in food comminution may have favoured increased body growth, before later loss of tooth efficiency due to severe wear. These results

Wear Fast, Die Young: More Worn Teeth and Shorter Lives in Iberian Compared to Scottish Red Deer.

PubMed

Pérez-Barbería, F J; Carranza, J; Sánchez-Prieto, C

2015-01-01

Teeth in Cervidae are permanent structures that are not replaceable or repairable; consequently their rate of wear, due to the grinding effect of food and dental attrition, affects their duration and can determine an animal's lifespan. Tooth wear is also a useful indicator of accumulative life energy investment in intake and mastication and their interactions with diet. Little is known regarding how natural and sexual selection operate on dental structures within a species in contrasting environments and how these relate to life history traits to explain differences in population rates of tooth wear and longevity. We hypothesised that populations under harsh environmental conditions should be selected for more hypsodont teeth while sexual selection may maintain similar sex differences within different populations. We investigated the patterns of tooth wear in males and females of Iberian red deer (Cervus elaphus hispanicus) in Southern Spain and Scottish red deer (C. e. scoticus) across Scotland, that occur in very different environments, using 10343 samples from legal hunting activities. We found higher rates of both incisor and molar wear in the Spanish compared to Scottish populations. However, Scottish red deer had larger incisors at emergence than Iberian red deer, whilst molars emerged at a similar size in both populations and sexes. Iberian and Scottish males had earlier tooth depletion than females, in support of a similar sexual selection process in both populations. However, whilst average lifespan for Iberian males was 4 years shorter than that for Iberian females and Scottish males, Scottish males only showed a reduction of 1 year in average lifespan with respect to Scottish females. More worn molars were associated with larger mandibles in both populations, suggesting that higher intake and/or greater investment in food comminution may have favoured increased body growth, before later loss of tooth efficiency due to severe wear. These results

Lessons learned from the ATLAS performance studies of the Iberian Cloud for the first LHC running period

NASA Astrophysics Data System (ADS)

Sánchez-Martínez, V.; Borges, G.; Borrego, C.; del Peso, J.; Delfino, M.; Gomes, J.; González de la Hoz, S.; Pacheco Pages, A.; Salt, J.; Sedov, A.; Villaplana, M.; Wolters, H.

2014-06-01

In this contribution we describe the performance of the Iberian (Spain and Portugal) ATLAS cloud during the first LHC running period (March 2010-January 2013) in the context of the GRID Computing and Data Distribution Model. The evolution of the resources for CPU, disk and tape in the Iberian Tier-1 and Tier-2s is summarized. The data distribution over all ATLAS destinations is shown, focusing on the number of files transferred and the size of the data. The status and distribution of simulation and analysis jobs within the cloud are discussed. The Distributed Analysis tools used to perform physics analysis are explained as well. Cloud performance in terms of the availability and reliability of its sites is discussed. The effect of the changes in the ATLAS Computing Model on the cloud is analyzed. Finally, the readiness of the Iberian Cloud towards the first Long Shutdown (LS1) is evaluated and an outline of the foreseen actions to take in the coming years is given. The shutdown will be a good opportunity to improve and evolve the ATLAS Distributed Computing system to prepare for the future challenges of the LHC operation.

The maternal genetic make-up of the Iberian Peninsula between the Neolithic and the Early Bronze Age.

PubMed

Szécsényi-Nagy, Anna; Roth, Christina; Brandt, Guido; Rihuete-Herrada, Cristina; Tejedor-Rodríguez, Cristina; Held, Petra; García-Martínez-de-Lagrán, Íñigo; Arcusa Magallón, Héctor; Zesch, Stephanie; Knipper, Corina; Bánffy, Eszter; Friederich, Susanne; Meller, Harald; Bueno Ramírez, Primitiva; Barroso Bermejo, Rosa; de Balbín Behrmann, Rodrigo; Herrero-Corral, Ana M; Flores Fernández, Raúl; Alonso Fernández, Carmen; Jiménez Echevarria, Javier; Rindlisbacher, Laura; Oliart, Camila; Fregeiro, María-Inés; Soriano, Ignacio; Vicente, Oriol; Micó, Rafael; Lull, Vicente; Soler Díaz, Jorge; López Padilla, Juan Antonio; Roca de Togores Muñoz, Consuelo; Hernández Pérez, Mauro S; Jover Maestre, Francisco Javier; Lomba Maurandi, Joaquín; Avilés Fernández, Azucena; Lillios, Katina T; Silva, Ana Maria; Magalhães Ramalho, Miguel; Oosterbeek, Luiz Miguel; Cunha, Claudia; Waterman, Anna J; Roig Buxó, Jordi; Martínez, Andrés; Ponce Martínez, Juana; Hunt Ortiz, Mark; Mejías-García, Juan Carlos; Pecero Espín, Juan Carlos; Cruz-Auñón Briones, Rosario; Tomé, Tiago; Carmona Ballestero, Eduardo; Cardoso, João Luís; Araújo, Ana Cristina; Liesau von Lettow-Vorbeck, Corina; Blasco Bosqued, Concepción; Ríos Mendoza, Patricia; Pujante, Ana; Royo-Guillén, José I; Esquembre Beviá, Marco Aurelio; Dos Santos Goncalves, Victor Manuel; Parreira, Rui; Morán Hernández, Elena; Méndez Izquierdo, Elena; Vega Y Miguel, Jorge; Menduiña García, Roberto; Martínez Calvo, Victoria; López Jiménez, Oscar; Krause, Johannes; Pichler, Sandra L; Garrido-Pena, Rafael; Kunst, Michael; Risch, Roberto; Rojo-Guerra, Manuel A; Haak, Wolfgang; Alt, Kurt W

2017-11-15

Agriculture first reached the Iberian Peninsula around 5700 BCE. However, little is known about the genetic structure and changes of prehistoric populations in different geographic areas of Iberia. In our study, we focus on the maternal genetic makeup of the Neolithic (~ 5500-3000 BCE), Chalcolithic (~ 3000-2200 BCE) and Early Bronze Age (~ 2200-1500 BCE). We report ancient mitochondrial DNA results of 213 individuals (151 HVS-I sequences) from the northeast, central, southeast and southwest regions and thus on the largest archaeogenetic dataset from the Peninsula to date. Similar to other parts of Europe, we observe a discontinuity between hunter-gatherers and the first farmers of the Neolithic. During the subsequent periods, we detect regional continuity of Early Neolithic lineages across Iberia, however the genetic contribution of hunter-gatherers is generally higher than in other parts of Europe and varies regionally. In contrast to ancient DNA findings from Central Europe, we do not observe a major turnover in the mtDNA record of the Iberian Late Chalcolithic and Early Bronze Age, suggesting that the population history of the Iberian Peninsula is distinct in character.

Crustal structure of an intraplate thrust belt: The Iberian Chain revealed by wide-angle seismic, magnetotelluric soundings and gravity data

NASA Astrophysics Data System (ADS)

Seillé, Hoël; Salas, Ramon; Pous, Jaume; Guimerà, Joan; Gallart, Josep; Torne, Montserrat; Romero-Ruiz, Ivan; Diaz, Jordi; Ruiz, Mario; Carbonell, Ramon; Mas, Ramón

2015-11-01

The Iberian Chain is a Cenozoic intraplate thrust belt located within the Iberian plate. Unlike other belts in the Iberia Peninsula, the scarcity of geophysical studies in this area results in a number of unknowns about its crustal structure. The Iberian Chain crust was investigated by means of a NE-SW refraction/wide-angle reflection seismic transect and two magnetotelluric profiles across the chain, oriented along the same direction. The seismic profile was designed to sample the crust by means of three shots designed to obtain a reversed profile. The resulting velocity-depth model shows a moderate thickening of the crust toward the central part of the profile, where crustal thickness reaches values above 40 km, thinning toward de SW Tajo and NE Ebro foreland basins. The crustal thickening is concentrated in the upper crust. The seismic results are in overall agreement with regional trends of Bouguer gravity anomaly and the main features of the seismic model were reproduced by gravity modeling. The magnetotelluric data consist of 39 sites grouped into two profiles, with periods ranging from 0.01 s to 1000 s. Dimensionality analyses show significant 3D effects in the resistivity structure and therefore we carried out a joint 3D inversion of the full impedance tensor and magnetic transfer functions. The Mesozoic and Cenozoic basins along the Chain are well characterized by shallow high conductive zones and low velocities. Elongated conductors reaching mid-crustal depths evidence the presence of major faults dominating the crustal structure. The results from the interpretation of these complementary geophysical data sets provided the first images of the crustal structure of the Iberian Chain. They are consistent with a Cenozoic shortening responsible of the upper crust thickening as well as of the uplift of the Iberian Chain and the generation of its present day topography.

Freshwater macroinvertebrate samples from a water quality monitoring network in the Iberian Peninsula.

PubMed

Escribano, Nora; Oscoz, Javier; Galicia, David; Cancellario, Tommaso; Durán, Concha; Navarro, Patricia; Ariño, Arturo H

2018-06-05

This dataset gathers information about the macroinvertatebrate samples and environmental variables collected on rivers of the Ebro River Basin (NE Iberian Peninsula), the second largest catchment in the Iberian Peninsula. The collection is composed of 1,776 sampling events carried out between 2005 and 2015 at more than 400 sampling sites. This dataset is part of a monitoring network set up by the Ebro Hydrographic Confederation, the official body entrusted with the care of the basin, to fulfill the requirements of the European Water Framework Directive. Biological indices based on the freshwater macroinvertebrate communities were used to evaluate the ecological status of the water bodies within the basin. Samples were qualitatively screened for all occurring taxa. Then, all individuals from all taxa in a quantitative subsample of each sample were counted. Biological indices were calculated to estimate water quality at each sampling site. All samples are kept at the Museum of Zoology of the University of Navarra.

Freshwater macroinvertebrate samples from a water quality monitoring network in the Iberian Peninsula

PubMed Central

Escribano, Nora; Oscoz, Javier; Galicia, David; Cancellario, Tommaso; Durán, Concha; Navarro, Patricia; Ariño, Arturo H.

2018-01-01

This dataset gathers information about the macroinvertatebrate samples and environmental variables collected on rivers of the Ebro River Basin (NE Iberian Peninsula), the second largest catchment in the Iberian Peninsula. The collection is composed of 1,776 sampling events carried out between 2005 and 2015 at more than 400 sampling sites. This dataset is part of a monitoring network set up by the Ebro Hydrographic Confederation, the official body entrusted with the care of the basin, to fulfill the requirements of the European Water Framework Directive. Biological indices based on the freshwater macroinvertebrate communities were used to evaluate the ecological status of the water bodies within the basin. Samples were qualitatively screened for all occurring taxa. Then, all individuals from all taxa in a quantitative subsample of each sample were counted. Biological indices were calculated to estimate water quality at each sampling site. All samples are kept at the Museum of Zoology of the University of Navarra. PMID:29870034

DETOMIDINE AND BUTORPHANOL FOR STANDING SEDATION IN A RANGE OF ZOO-KEPT UNGULATE SPECIES.

PubMed

Bouts, Tim; Dodds, Joanne; Berry, Karla; Arif, Abdi; Taylor, Polly; Routh, Andrew; Gasthuys, Frank

2017-09-01

General anesthesia poses risks for larger zoo species, like cardiorespiratory depression, myopathy, and hyperthermia. In ruminants, ruminal bloat and regurgitation of rumen contents with potential aspiration pneumonia are added risks. Thus, the use of sedation to perform minor procedures is justified in zoo animals. A combination of detomidine and butorphanol has been routinely used in domestic animals. This drug combination, administered by remote intramuscular injection, can also be applied for standing sedation in a range of zoo animals, allowing a number of minor procedures. The combination was successfully administered in five species of nondomesticated equids (Przewalski horse [ Equus ferus przewalskii; n = 1], onager [ Equus hemionus onager; n = 4], kiang [ Equus kiang ; n = 3], Grevy's zebra [ Equus grevyi ; n = 4], and Somali wild ass [ Equus africanus somaliensis; n = 7]), with a mean dose range of 0.10-0.17 mg/kg detomidine and 0.07-0.13 mg/kg butorphanol; the white ( Ceratotherium simum simum; n = 12) and greater one-horned rhinoceros ( Rhinoceros unicornis ; n = 4), with a mean dose of 0.015 mg/kg of both detomidine and butorphanol; and Asiatic elephant bulls ( Elephas maximus ; n = 2), with a mean dose of 0.018 mg/kg of both detomidine and butorphanol. In addition, the combination was successfully used for standing sedation in six species of artiodactylids: giraffe ( Giraffa camelopardalis reticulata; n = 3), western bongo ( Tragelaphus eurycerus eurycerus; n = 2), wisent ( Bison bonasus ; n = 5), yak ( Bos grunniens ; n = 1), water buffalo ( Bubalus bubalis ; n = 4) and Bactrian camel ( Camelus bactrianus ; n = 5). The mean dose range for artiodactylid species except bongo was 0.04-0.06 mg/kg detomidine and 0.03-0.06 mg/kg butorphanol. The dose in bongo, 0.15-0.20 mg/kg detomidine and 0.13-0.15 mg/kg butorphanol, was considerably higher. Times to first effect, approach, and recovery after antidote were short. The use of detomidine and butorphanol has

Effects of teleconnection patterns on the atmospheric routes, precipitation and deposition amounts in the north-eastern Iberian Peninsula

NASA Astrophysics Data System (ADS)

Izquierdo, Rebeca; Alarcón, Marta; Aguillaume, Laura; Àvila, Anna

2014-06-01

The North Atlantic Oscillation (NAO) has been identified as one of the atmospheric patterns which mostly influence the temporal evolution of precipitation and temperature in the Mediterranean area. Recently, the Western Mediterranean Oscillation (WeMO) has also been proposed to describe the precipitation variability in the eastern Iberian Peninsula. This paper examines whether the chemical signature and/or the chemical deposition amounts recorded over NE Iberian Peninsula are influenced by these climatic variability patterns. Results show a more relevant role of the WeMO compared to NAO in the deposition of either marine (Cl-, Na+, Mg2+) or anthropogenic pollutants (H+, NH4+, NO3- and SO42-). A cluster classification of provenances indicated that in winter (December to March) fast Atlantic air flows correspond to positive WeMO indices, while negative WeMOi are associated to Northeastern and Southwestern circulations. The negative phase of WeMO causes the entry of air masses from the Mediterranean into the Iberian Peninsula, that are enriched with marine ions and ions of anthropogenic origin (NH4+, NO3- and SO42-). For these later, this suggests the advection over the Mediterranean of polluted air masses from southern Europe and the scavenging and deposition of this pollution by precipitation during the WeMO negative phases. This will carry transboundary pollutants to the NE Iberian Peninsula. However, local pollutants may also contribute, as precipitation events from the Mediterranean and the Atlantic (associated to both WeMO phases) may incorporate emissions that accumulate locally during the winter anticyclonic episodes typical of the region.

Outbreak of ringworm in a traditional Iberian pig farm in Spain.

PubMed

García-Sánchez, Alfredo; Bazán, Javier; de Mendoza, Javier Hermoso; Martínez, Remigio; Sánchez, Sergio; de Mendoza, Miguel Hermoso

2011-03-01

An outbreak of dermatophytosis caused by Microsporum nanum in a traditional Iberian extensive farm is described. The morbidity was 100% among lactating sows; however, suckling and weaning pigs, as well as boars never developed the lesions seen in the sows. The clinical aspects of porcine ringworm caused by this fungus are discussed and the ecology of the organism is reviewed. © 2009 Blackwell Verlag GmbH.

76 FR 17439 - Nonessential Experimental Populations of Gray Wolves in the Northern Rocky Mountains; Lethal Take...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-29

... on wild ungulate populations (deer, elk, moose, bighorn sheep, mountain goats, antelope, or bison) as... in the State below 20 breeding pairs and 200 wolves, and will not impede wolf recovery. Draft...

Bacterial genomics reveal the complex epidemiology of an emerging pathogen in arctic and boreal ungulates

USGS Publications Warehouse

Forde, Taya L.; Orsel, Karin; Zadoks, Ruth N.; Biek, Roman; Adams, Layne G.; Checkley, Sylvia L.; Davison, Tracy; De Buck, Jeroen; Dumond, Mathieu; Elkin, Brett T.; Finnegan, Laura; Macbeth, Bryan J.; Nelson, Cait; Niptanatiak, Amanda; Sather, Shane; Schwantje, Helen M.; van der Meer, Frank; Kutz, Susan J.

2016-01-01

Northern ecosystems are currently experiencing unprecedented ecological change, largely driven by a rapidly changing climate. Pathogen range expansion, and emergence and altered patterns of infectious disease, are increasingly reported in wildlife at high latitudes. Understanding the causes and consequences of shifting pathogen diversity and host-pathogen interactions in these ecosystems is important for wildlife conservation, and for indigenous populations that depend on wildlife. Among the key questions are whether disease events are associated with endemic or recently introduced pathogens, and whether emerging strains are spreading throughout the region. In this study, we used a phylogenomic approach to address these questions of pathogen endemicity and spread for Erysipelothrix rhusiopathiae, an opportunistic multi-host bacterial pathogen associated with recent mortalities in arctic and boreal ungulate populations in North America. We isolated E. rhusiopathiae from carcasses associated with large-scale die-offs of muskoxen in the Canadian Arctic Archipelago, and from contemporaneous mortality events and/or population declines among muskoxen in northwestern Alaska and caribou and moose in western Canada. Bacterial genomic diversity differed markedly among these locations; minimal divergence was present among isolates from muskoxen in the Canadian Arctic, while in caribou and moose populations, strains from highly divergent clades were isolated from the same location, or even from within a single carcass. These results indicate that mortalities among northern ungulates are not associated with a single emerging strain of E. rhusiopathiae, and that alternate hypotheses need to be explored. Our study illustrates the value and limitations of bacterial genomic data for discriminating between ecological hypotheses of disease emergence, and highlights the importance of studying emerging pathogens within the broader context of environmental and host factors.

SNP discovery in candidate adaptive genes using exon capture in a free-ranging alpine ungulate

USGS Publications Warehouse

Roffler, Gretchen H.; Amish, Stephen J.; Smith, Seth; Cosart, Ted F.; Kardos, Marty; Schwartz, Michael K.; Luikart, Gordon

2016-01-01

Identification of genes underlying genomic signatures of natural selection is key to understanding adaptation to local conditions. We used targeted resequencing to identify SNP markers in 5321 candidate adaptive genes associated with known immunological, metabolic and growth functions in ovids and other ungulates. We selectively targeted 8161 exons in protein-coding and nearby 5′ and 3′ untranslated regions of chosen candidate genes. Targeted sequences were taken from bighorn sheep (Ovis canadensis) exon capture data and directly from the domestic sheep genome (Ovis aries v. 3; oviAri3). The bighorn sheep sequences used in the Dall's sheep (Ovis dalli dalli) exon capture aligned to 2350 genes on the oviAri3 genome with an average of 2 exons each. We developed a microfluidic qPCR-based SNP chip to genotype 476 Dall's sheep from locations across their range and test for patterns of selection. Using multiple corroborating approaches (lositan and bayescan), we detected 28 SNP loci potentially under selection. We additionally identified candidate loci significantly associated with latitude, longitude, precipitation and temperature, suggesting local environmental adaptation. The three methods demonstrated consistent support for natural selection on nine genes with immune and disease-regulating functions (e.g. Ovar-DRA, APC, BATF2, MAGEB18), cell regulation signalling pathways (e.g. KRIT1, PI3K, ORRC3), and respiratory health (CYSLTR1). Characterizing adaptive allele distributions from novel genetic techniques will facilitate investigation of the influence of environmental variation on local adaptation of a northern alpine ungulate throughout its range. This research demonstrated the utility of exon capture for gene-targeted SNP discovery and subsequent SNP chip genotyping using low-quality samples in a nonmodel species.

Evaluation of three enzyme-linked immunosorbent assays for sarcoptic mange diagnosis and assessment in the Iberian ibex, Capra pyrenaica.

PubMed

Ráez-Bravo, Arián; Granados, José Enrique; Serrano, Emmanuel; Dellamaria, Debora; Casais, Rosa; Rossi, Luca; Puigdemont, Anna; Cano-Manuel, Francisco Javier; Fandos, Paulino; Pérez, Jesús María; Espinosa, José; Soriguer, Ramón Casimiro; Citterio, Carlo; López-Olvera, Jorge Ramón

2016-10-21

Sarcoptic mange is a contagious skin disease caused by the mite Sarcoptes scabiei, affecting different mammalian species worldwide including the Iberian ibex (Capra pyrenaica), in which mortalities over 90 % of the population have been reported. No efficient diagnostic methods are available for this disease, particularly when there are low mite numbers and mild or no clinical signs. In this study, three enzyme-linked immunosorbent assays (ELISA) developed for dog (ELISA A), Cantabrian chamois (Rupicapra pyrenaica parva) (ELISA B) and Alpine chamois (Rupicapra rupicapra) (ELISA C), were evaluated to detect specific antibodies (IgG) to sarcoptic mange in Iberian ibex sera. Serum samples from 131 Iberian ibexes (86 healthy and 45 scabietic) were collected from 2005 to 2012 in the Sierra Nevada Natural and National Parks (southern Spain). Based on visual inspection, ibexes were classified into one of three categories, namely healthy (without scabietic compatible lesions), mildly affected (skin lesions over less than 50 % of the body surface) and severely affected (skin lesions over more than 50 % of the body surface). The optimal cut-off point, specificity, sensitivity and the area under the curve (AUC) were calculated, and the agreement between tests was determined. Moreover, differences in the optical density (OD) related to scabies severity have been evaluated for the best test. ELISA C showed better performance than the two other tests, reaching higher values of sensitivity (93.0 %) and specificity (93.5 %) against the visual estimation of the percentage of affected skin, chosen as the gold standard. Significantly higher concentrations of specific antibodies were observed with this test in the mildly and severely infested ibexes than in healthy ones. Our results revealed that ELISA C was an optimal test to diagnose sarcoptic mange in the Iberian ibex. Further studies characterizing immune response during the course of the disease, including spontaneous or drug

Validation of a biotelemetric technique, using ambulatory miniature black globe thermometers, to quantify thermoregulatory behaviour in ungulates.

PubMed

Hetem, Robyn S; Maloney, Shane K; Fuller, Andrea; Meyer, Leith C R; Mitchell, Duncan

2007-06-01

Behavioural thermoregulation is an animal's primary defence against changes in the thermal environment. We aimed to validate a remote technique to quantify the thermal environment behaviourally selected by free-ranging ungulates. First, we demonstrated that the temperature of miniature, 30 mm diameter, black globes (miniglobes) could be converted to standard, 150 mm diameter, black globe temperatures. Miniglobe temperature sensors subsequently were fitted to collars on three free-ranging ungulates, namely blue wildebeest (Connochaetes taurinus), impala (Aepyceros melampus) and horse (Equus caballus). Behavioural observations were reflected in animal miniglobe temperatures which differed from those recorded by an identical miniglobe on a nearby exposed weather station. The wildebeest often selected sites protected from the wind, whereas the impala and the horse sheltered from the sun. Nested analysis of variances revealed that the impala and horse selected significantly less variable environments than those recorded at the weather station (P<0.001) over a 20-min time interval, whereas, the microclimates selected by wildebeest tended to be more variable (P=0.08). Correlation of animal miniglobe against weather station miniglobe temperature resulted in regression slopes significantly less than one (P<0.001) for all species studied, implying that, overall, the animals selected cooler microclimates at high environmental heat loads and/or warmer microclimates at low environmental heat loads. We, therefore, have developed an ambulatory device, which can be attached to free-ranging animals, to remotely quantify thermoregulatory behaviour and selected microclimates. (c) 2007 Wiley-Liss, Inc.

Iberian Spanish Function Catalog. Method for Determining Language Objectives and Criteria, Volume VI.

ERIC Educational Resources Information Center

Setzler, Hubert H., Jr.; And Others

This Iberian Spanish Function Catalog presents sentences, phrases, and patterns organized by language functions and functional categories. This catalog is part of the communication/language objectives-based system (C/LOBS), which supports the front-end analysis efforts of the Defense Language Institute Foreign Language Center. The C/LOBS project,…

A review of the arcuate structures in the Iberian Variscides; constraints and genetic models

NASA Astrophysics Data System (ADS)

Dias, R.; Ribeiro, A.; Romão, J.; Coke, C.; Moreira, N.

2016-06-01

The main Ibero-Armorican Arc (IAA) is essentially defined by a predominant NW-SE trend in the Iberian branch and an E-W trend in the Brittany one. However, in northern Spain it presents a 180° rotation, sometimes known as the Cantabrian Arc (CA). The relation between both arcs is controversial, being considered either as a single arc due to one tectonic event, or as the result of a polyphasic process. According to the last assumption, there is a later arcuate structure (CA), overlapping a previous major one (IAA). Whatever the models, they must be able to explain the presence of a Variscan sinistral transpression in Iberia and a dextral one in Armorica, and a deformation spanning from the Devonian to the Upper Carboniferous. Another arcuate structure, in continuity with the CA, the Central-Iberian Arc (CIA) was recently proposed mainly based upon on magnetic anomalies, geometry of major folds and Ordovician paleocurrents. The critical review of the structural, stratigraphic and geophysical data supports both the IAA and the CA, but as independent structures. However, the presence of a CIA is highly questionable and could not be supported. The complex strain pattern of the IAA and the CA could be explained by a Devonian - Carboniferous polyphasic indentation of a Gondwana promontory. In this model the CA is essentially a thin-skinned arc, while the IAA has a more complex and longer evolution that has led to a thick-skinned first order structure. Nevertheless, both arcs are essentially the result of a lithospheric bending process during the Iberian Variscides.

Analysis of the relationship between the monthly temperatures and weather types in Iberian Peninsula

NASA Astrophysics Data System (ADS)

Peña Angulo, Dhais; Trigo, Ricardo; Nicola, Cortesi; José Carlos, González-Hidalgo

2016-04-01

In this study, the relationship between the atmospheric circulation and weather types and the monthly average maximum and minimum temperatures in the Iberian Peninsula is modeled (period 1950-2010). The temperature data used were obtained from a high spatial resolution (10km x 10km) dataset (MOTEDAS dataset, Gonzalez-Hidalgo et al., 2015a). In addition, a dataset of Portuguese temperatures was used (obtained from the Portuguese Institute of Sea and Atmosphere). The weather type classification used was the one developed by Jenkinson and Collison, which was adapted for the Iberian Peninsula by Trigo and DaCamara (2000), using Sea Level Pressure data from NCAR/NCEP Reanalysis dataset (period 1951-2010). The analysis of the behaviour of monthly temperatures based on the weather types was carried out using a stepwise regression procedure of type forward to estimate temperatures in each cell of the considered grid, for each month, and for both maximum and minimum monthly average temperatures. The model selects the weather types that best estimate the temperatures. From the validation model it was obtained the error distribution in the time (months) and space (Iberian Peninsula). The results show that best estimations are obtained for minimum temperatures, during the winter months and in coastal areas. González-Hidalgo J.C., Peña-Angulo D., Brunetti M., Cortesi, C. (2015a): MOTEDAS: a new monthly temperature database for mainland Spain and the trend in temperature (1951-2010). International Journal of Climatology 31, 715-731. DOI: 10.1002/joc.4298

Snow Leopard and Himalayan Wolf: Food Habits and Prey Selection in the Central Himalayas, Nepal

PubMed Central

Odden, Morten; Wegge, Per

2017-01-01

Top carnivores play an important role in maintaining energy flow and functioning of the ecosystem, and a clear understanding of their diets and foraging strategies is essential for developing effective conservation strategies. In this paper, we compared diets and prey selection of snow leopards and wolves based on analyses of genotyped scats (snow leopards n = 182, wolves n = 57), collected within 26 sampling grid cells (5×5 km) that were distributed across a vast landscape of ca 5000 km2 in the Central Himalayas, Nepal. Within the grid cells, we sampled prey abundances using the double observer method. We found that interspecific differences in diet composition and prey selection reflected their respective habitat preferences, i.e. snow leopards significantly preferred cliff-dwelling wild ungulates (mainly bharal, 57% of identified material in scat samples), whereas wolves preferred typically plain-dwellers (Tibetan gazelle, kiang and argali, 31%). Livestock was consumed less frequently than their proportional availability by both predators (snow leopard = 27%; wolf = 24%), but significant avoidance was only detected among snow leopards. Among livestock species, snow leopards significantly preferred horses and goats, avoided yaks, and used sheep as available. We identified factors influencing diet composition using Generalized Linear Mixed Models. Wolves showed seasonal differences in the occurrence of small mammals/birds, probably due to the winter hibernation of an important prey, marmots. For snow leopard, occurrence of both wild ungulates and livestock in scats depended on sex and latitude. Wild ungulates occurrence increased while livestock decreased from south to north, probably due to a latitudinal gradient in prey availability. Livestock occurred more frequently in scats from male snow leopards (males: 47%, females: 21%), and wild ungulates more frequently in scats from females (males: 48%, females: 70%). The sexual difference agrees with previous

Farm-level risk factors for the occurrence, new infection or persistence of tuberculosis in cattle herds from South-Central Spain.

PubMed

Martínez-López, B; Barasona, J A; Gortázar, C; Rodríguez-Prieto, V; Sánchez-Vizcaíno, J M; Vicente, J

2014-10-01

Eradication of tuberculosis (TB) in cattle is a priority in the EU. However, and despite the resources invested, TB eradication is still a goal yet to be accomplished. As a consequence, the identification of risk factors contributing to TB transmission and persistence is key to a better understand and, ultimately, more cost-effectively control and eradicate this complex zoonotic disease worldwide. This study aimed to identify the factors contributing to the TB occurrence, new infection, and persistence in one of the most TB-prevalent regions in the South-Central part of Spain (SCS), Ciudad Real (CR), and for which high quality and detailed information on cattle and wild ungulate demographics, management, and sanitary status was available for up to 5 years (2007-2011). Multilevel logistic modeling was used for this purpose. Results of this study revealed that the risk for TB (occurrence, new infection, and/or persistence) in cattle herds from CR is related to TB-persistence on farm in previous years, extensive production systems (beef and bullfighting being more risky that dairy) and large farm in terms of cattle number. Also, the presence and proximity of fenced hunting estates (which are usually intensively managed) significantly contributed to the risk of TB occurrence and persistence in CR. This association suggests that wild ungulates may play a role as TB-reservoirs and transmit TB to cattle in the CR, a region where TB is endemic and is associated with extensive farming of beef cattle. To the best of author's knowledge this is the first study to (i) evaluate the wild ungulate-domestic interface at a farm level using detailed information over an extensive region and period of time (2007-2011) and (ii) to identify a direct association between TB in cattle and the proximity and management practices of wild ungulates. Methods and results presented here may support policies to better prevent and control TB in the SCS and in other regions/countries with similar

Snow Leopard and Himalayan Wolf: Food Habits and Prey Selection in the Central Himalayas, Nepal.

PubMed

Chetri, Madhu; Odden, Morten; Wegge, Per

2017-01-01

Top carnivores play an important role in maintaining energy flow and functioning of the ecosystem, and a clear understanding of their diets and foraging strategies is essential for developing effective conservation strategies. In this paper, we compared diets and prey selection of snow leopards and wolves based on analyses of genotyped scats (snow leopards n = 182, wolves n = 57), collected within 26 sampling grid cells (5×5 km) that were distributed across a vast landscape of ca 5000 km2 in the Central Himalayas, Nepal. Within the grid cells, we sampled prey abundances using the double observer method. We found that interspecific differences in diet composition and prey selection reflected their respective habitat preferences, i.e. snow leopards significantly preferred cliff-dwelling wild ungulates (mainly bharal, 57% of identified material in scat samples), whereas wolves preferred typically plain-dwellers (Tibetan gazelle, kiang and argali, 31%). Livestock was consumed less frequently than their proportional availability by both predators (snow leopard = 27%; wolf = 24%), but significant avoidance was only detected among snow leopards. Among livestock species, snow leopards significantly preferred horses and goats, avoided yaks, and used sheep as available. We identified factors influencing diet composition using Generalized Linear Mixed Models. Wolves showed seasonal differences in the occurrence of small mammals/birds, probably due to the winter hibernation of an important prey, marmots. For snow leopard, occurrence of both wild ungulates and livestock in scats depended on sex and latitude. Wild ungulates occurrence increased while livestock decreased from south to north, probably due to a latitudinal gradient in prey availability. Livestock occurred more frequently in scats from male snow leopards (males: 47%, females: 21%), and wild ungulates more frequently in scats from females (males: 48%, females: 70%). The sexual difference agrees with previous

Re-evaluating neonatal-age models for ungulates: Does model choice affect survival estimates?

USGS Publications Warehouse

Grovenburg, Troy W.; Monteith, Kevin L.; Jacques, Christopher N.; Klaver, Robert W.; DePerno, Christopher S.; Brinkman, Todd J.; Monteith, Kyle B.; Gilbert, Sophie L.; Smith, Joshua B.; Bleich, Vernon C.; Swanson, Christopher C.; Jenks, Jonathan A.

2014-01-01

New-hoof growth is regarded as the most reliable metric for predicting age of newborn ungulates, but variation in estimated age among hoof-growth equations that have been developed may affect estimates of survival in staggered-entry models. We used known-age newborns to evaluate variation in age estimates among existing hoof-growth equations and to determine the consequences of that variation on survival estimates. During 2001–2009, we captured and radiocollared 174 newborn (≤24-hrs old) ungulates: 76 white-tailed deer (Odocoileus virginianus) in Minnesota and South Dakota, 61 mule deer (O. hemionus) in California, and 37 pronghorn (Antilocapra americana) in South Dakota. Estimated age of known-age newborns differed among hoof-growth models and varied by >15 days for white-tailed deer, >20 days for mule deer, and >10 days for pronghorn. Accuracy (i.e., the proportion of neonates assigned to the correct age) in aging newborns using published equations ranged from 0.0% to 39.4% in white-tailed deer, 0.0% to 3.3% in mule deer, and was 0.0% for pronghorns. Results of survival modeling indicated that variability in estimates of age-at-capture affected short-term estimates of survival (i.e., 30 days) for white-tailed deer and mule deer, and survival estimates over a longer time frame (i.e., 120 days) for mule deer. Conversely, survival estimates for pronghorn were not affected by estimates of age. Our analyses indicate that modeling survival in daily intervals is too fine a temporal scale when age-at-capture is unknown given the potential inaccuracies among equations used to estimate age of neonates. Instead, weekly survival intervals are more appropriate because most models accurately predicted ages within 1 week of the known age. Variation among results of neonatal-age models on short- and long-term estimates of survival for known-age young emphasizes the importance of selecting an appropriate hoof-growth equation and appropriately defining intervals (i.e., weekly

Prevalence of Toxoplasma gondii and Neosport caninum antibodies in Spanish ibex (Capra pryenaica hispanica)

USDA-ARS?s Scientific Manuscript database

Wild felids are considered important in maintaining the sylvatic cycle of Toxoplasma gondii. Although, T. gondii antibodies have been reported in several species of wild felids, little is known of the epidemiology and risk factors associated with T. gondii infection in wild cats. The Iberian lynx (L...

Strontium isotope investigation of ungulate movement patterns on the Pleistocene Paleo-Agulhas Plain of the Greater Cape Floristic Region, South Africa

DOE Office of Scientific and Technical Information (OSTI.GOV)

Copeland, Sandi R.; Cawthra, Hayley C.; Fisher, Erich C.

Middle Stone Age sites located within the Greater Cape Floristic Region on the South African southern coast have material culture with early evidence for key modern human behaviors such as projectile weaponry, large animal hunting, and symbolic behavior. In order to interpret how and why these changes evolved, it is necessary to understand their ecological context as it has direct relevance to foraging behavior. During periods of lowered sea level, a largely flat and vast expanse of land existed south of the modern coastline, but it is now submerged by higher sea levels. This exposed area, the Paleo-Agulhas Plain, likelymore » created an ecological context unlike anything in the region today, as evidenced by fossil assemblages dominated by migratory ungulates. One hypothesis is that the Paleo-Agulhas Plain supported a migration ecosystem of large grazers driven by summer rainfall, producing palatable forage during summer in the east, and winter rainfall, producing palatable forage during winter in the west. Furthermore, ungulates may have been moving from the coastal plain in the south to the interior north of the Cape Fold Mountains, as observed for elephants in historic times.« less

Strontium isotope investigation of ungulate movement patterns on the Pleistocene Paleo-Agulhas Plain of the Greater Cape Floristic Region, South Africa

DOE PAGES

Copeland, Sandi R.; Cawthra, Hayley C.; Fisher, Erich C.; ...

2016-04-16

Middle Stone Age sites located within the Greater Cape Floristic Region on the South African southern coast have material culture with early evidence for key modern human behaviors such as projectile weaponry, large animal hunting, and symbolic behavior. In order to interpret how and why these changes evolved, it is necessary to understand their ecological context as it has direct relevance to foraging behavior. During periods of lowered sea level, a largely flat and vast expanse of land existed south of the modern coastline, but it is now submerged by higher sea levels. This exposed area, the Paleo-Agulhas Plain, likelymore » created an ecological context unlike anything in the region today, as evidenced by fossil assemblages dominated by migratory ungulates. One hypothesis is that the Paleo-Agulhas Plain supported a migration ecosystem of large grazers driven by summer rainfall, producing palatable forage during summer in the east, and winter rainfall, producing palatable forage during winter in the west. Furthermore, ungulates may have been moving from the coastal plain in the south to the interior north of the Cape Fold Mountains, as observed for elephants in historic times.« less

First cases of European bat lyssavirus type 1 in Iberian serotine bats: Implications for the molecular epidemiology of bat rabies in Europe.

PubMed

Mingo-Casas, Patricia; Sandonís, Virginia; Obón, Elena; Berciano, José M; Vázquez-Morón, Sonia; Juste, Javier; Echevarría, Juan E

2018-04-01

Previous studies have shown that EBLV-1 strains exclusively hosted by Eptesicus isabellinus bats in the Iberian Peninsula cluster in a specific monophyletic group that is related to the EBLV-1b lineage found in the rest of Europe. More recently, enhanced passive surveillance has allowed the detection of the first EBLV-1 strains associated to Eptesicus serotinus south of the Pyrenees. The aim of this study is the reconstruction of the EBLV-1 phylogeny and phylodynamics in the Iberian Peninsula in the context of the European continent. We have sequenced 23 EBLV-1 strains detected on nine E. serotinus and 14 E. isabellinus. Phylogenetic analyses were performed on the first 400-bp-5' fragment of the Nucleoprotein (N) gene together with other 162 sequences from Europe. Besides, fragments of the variable region of the phosphoprotein (P) gene and the glycoprotein-polymerase (G-L) intergenic region were studied on Spanish samples. Phylogenies show that two of the new EBLV-1a strains from Iberian E. serotinus clustered together with French strains from the North of the Pyrenees, suggesting a recent expansion southwards of this subtype. The remaining seven Iberian strains from E. serotinus grouped, instead, within the cluster linked, so far, to E. isabellinus, indicating that spatial distribution prevails over species specificity in explaining rabies distribution and supporting interspecific transmission. The structure found within the Iberian Peninsula for EBLV-1b is in concordance with that described previously for E. isabellinus. Finally, we have found that the current EBLV-1 European strains could have emerged only 175 years ago according to our evolutionary dynamics analyses.

High-Resolution Analysis of Human Y-Chromosome Variation Shows a Sharp Discontinuity and Limited Gene Flow between Northwestern Africa and the Iberian Peninsula

PubMed Central

Bosch, Elena; Calafell, Francesc; Comas, David; Oefner, Peter J.; Underhill, Peter A.; Bertranpetit, Jaume

2001-01-01

In the present study we have analyzed 44 Y-chromosome biallelic polymorphisms in population samples from northwestern (NW) Africa and the Iberian Peninsula, which allowed us to place each chromosome unequivocally in a phylogenetic tree based on >150 polymorphisms. The most striking results are that contemporary NW African and Iberian populations were found to have originated from distinctly different patrilineages and that the Strait of Gibraltar seems to have acted as a strong (although not complete) barrier to gene flow. In NW African populations, an Upper Paleolithic colonization that probably had its origin in eastern Africa contributed 75% of the current gene pool. In comparison, ∼78% of contemporary Iberian Y chromosomes originated in an Upper Paleolithic expansion from western Asia, along the northern rim of the Mediterranean basin. Smaller contributions to these gene pools (constituting 13% of Y chromosomes in NW Africa and 10% of Y chromosomes in Iberia) came from the Middle East during the Neolithic and, during subsequent gene flow, from Sub-Saharan to NW Africa. Finally, bidirectional gene flow across the Strait of Gibraltar has been detected: the genetic contribution of European Y chromosomes to the NW African gene pool is estimated at 4%, and NW African populations may have contributed 7% of Iberian Y chromosomes. The Islamic rule of Spain, which began in a.d. 711 and lasted almost 8 centuries, left only a minor contribution to the current Iberian Y-chromosome pool. The high-resolution analysis of the Y chromosome allows us to separate successive migratory components and to precisely quantify each historical layer. PMID:11254456

Composition and microstructure of Roman metallic artefacts of Southwestern Iberian Peninsula

NASA Astrophysics Data System (ADS)

Valério, P.; Voráčová, E.; Silva, R. J. C.; Araújo, M. F.; Soares, A. M. M.; Arruda, A. M.; Pereira, C.

2015-10-01

The Roman invasion introduces new alloys and metallurgical practices in Iberian Peninsula. The southwestern end of this region has many evidences of connections with the Roman World, but there are no studies about the manufacture and use of copper-based artefacts during this period. Therefore, a set of about 20 ornaments, tools and small attachments recovered at the Roman sites of Monte Molião and Cidade das Rosas was studied by an analytical approach combining micro-EDXRF, optical microscopy, SEM-EDS and Vickers microhardness testing. The artefact composition shows a good correlation with function, namely pure copper for nails and rivets, low-tin bronze (2-6 wt% Sn) for basic tools, high-tin bronze (14 wt% Sn) for fibulae and high-lead bronze (19 wt% Pb) for a decorated jug handle. The manufacture also depends on function because most artefacts were subjected to thermomechanical processing, except the ornaments that would not benefit from post-casting work. Brass and gunmetal were only present in the site with a later chronology. A metallurgy visibly ruled by economical, aesthetical and technological concerns reinforces the evidences about the total integration of Southwestern Iberian Peninsula in the Roman World, but further studies will be essential to determine the evolution of copper-based alloys in Lusitania under Roman influence.

Downscaling of global climate change estimates to regional scales: An application to Iberian rainfall in wintertime

DOE Office of Scientific and Technical Information (OSTI.GOV)

von Storch, H.; Zorita, E.; Cubasch, U.

A statistical strategy to deduct regional-scale features from climate general circulation model (GCM) simulations has been designed and tested. The main idea is to interrelate the characteristic patterns of observed simultaneous variations of regional climate parameters and of large-scale atmospheric flow using the canonical correlation technique. The large-scale North Atlantic sea level pressure (SLP) is related to the regional, variable, winter (DJF) mean Iberian Peninsula rainfall. The skill of the resulting statistical model is shown by reproducing, to a good approximation, the winter mean Iberian rainfall from 1900 to present from the observed North Atlantic mean SLP distributions. It ismore » shown that this observed relationship between these two variables is not well reproduced in the output of a general circulation model (GCM). The implications for Iberian rainfall changes as the response to increasing atmospheric greenhouse-gas concentrations simulated by two GCM experiments are examined with the proposed statistical model. In an instantaneous [open quotes]2 CO[sub 2][close quotes] doubling experiment, using the simulated change of the mean North Atlantic SLP field to predict Iberian rainfall yields, there is an insignificant increase of area-averaged rainfall of I mm/month, with maximum values of 4 mm/month in the northwest of the peninsula. In contrast, for the four GCM grid points representing the lberian Peninsula, the change is - 10 mm/month, with a minimum of - 19 mm/month in the southwest. In the second experiment, with the IPCC scenario A ([open quotes]business as usual[close quotes]) increase of CO[sub 2], the statistical-model results partially differ from the directly simulated rainfall changes: in the experimental range of 100 years, the area-averaged rainfall decreases by 7 mm/month (statistical model), and by 9 mm/month (GCM); at the same time the amplitude of the interdecadal variability is quite different. 17 refs., 10 figs.« less

A comparison of daily evaporation downscaled using WRFDA model and GLEAM dataset over the Iberian Peninsula.

NASA Astrophysics Data System (ADS)

José González-Rojí, Santos; Sáenz, Jon; Ibarra-Berastegi, Gabriel

2017-04-01

GLEAM dataset was presented a few years ago and since that moment, it has just been used for validation of evaporation in a few places of the world (Australia and Africa). The Iberian Peninsula is composed of different soil types and it is affected by different weather regimes, with different climate regions. It is this feature which makes it a very interesting zone for the study of the meteorological cycle, including evaporation. For that purpose, a numerical downscaling exercise over the Iberian Peninsula was run nesting the WRF model inside ERA Interim. Two model configurations were tested in two experiments spanning the period 2010-2014 after a one-year spin-up (2009). In the first experiment (N), boundary conditions drive the model. The second experiment (D) is configured the same way as the N case, but 3DVAR data assimilation is run every six hours (00Z, 06Z, 12Z and 18Z) using observations obtained from the PREPBUFR dataset. For both N and D runs and ERA Interim, the evaporation of the model runs was compared to GLEAM v3.0b and v3.0c datasets over the Iberian Peninsula, both at the daily and monthly time scales. GLEAM v3.0a was not used for validation as it uses for forcing radiation and air temperature data from ERA Interim. Results show that the experiment with data assimilation (D) improve the results obtained for N experiment. Moreover, correlations values are comparable to the ones obtained with ERA Interim. However, some negative correlation values are observed at Portuguese and Mediterranean coasts for both WRF runs. All of these problematic points are considered as urban sites by the NOAH land surface model. Because of that, the model is not able to simulate a correct evaporation value. Even with these discrepancies, better results than for ERA Interim are observed for seasonal Biases and daily RMSEs over Iberian Peninsula, obtaining the best values inland. Minimal differences are observed for the two GLEAM datasets selected.

Stopover ecology of a migratory ungulate

USGS Publications Warehouse

Sawyer, Hall; Kauffman, Matthew J.

2011-01-01

1. Birds that migrate long distances use stopover sites to optimize fuel loads and complete migration as quickly as possible. Stopover use has been predicted to facilitate a time-minimization strategy in land migrants as well, but empirical tests have been lacking, and alternative migration strategies have not been considered. 2. We used fine-scale movement data to evaluate the ecological role of stopovers in migratory mule deer Odocoileus hemionus— a land migrant whose fitness is strongly influenced by energy intake rather than migration speed. 3. Although deer could easily complete migrations (range 18–144 km) in several days, they took an average of 3 weeks and spent 95% of that time in a series of stopover sites that had higher forage quality than movement corridors. Forage quality of stopovers increased with elevation and distance from winter range. Mule deer use of stopovers corresponded with a narrow phenological range, such that deer occupied stopovers 44 days prior to peak green-up, when forage quality was presumed to be highest. Mule deer used one stopover for every 5∙3 and 6∙7 km travelled during spring and autumn migrations, respectively, and used the same stopovers in consecutive years. 4. Study findings indicate that stopovers play a key role in the migration strategy of mule deer by allowing individuals to migrate in concert with plant phenology and maximize energy intake rather than speed. Our results suggest that stopover use may be more common among non-avian taxa than previously thought and, although the underlying migration strategies of temperate ungulates and birds are quite different, stopover use is important to both. 5. Exploring the role of stopovers in land migrants broadens the scope of stopover ecology and recognizes that the applied and theoretical benefits of stopover ecology need not be limited to avian taxa.

Persistent genetic signatures of colonization in Brachionus manjavacas rotifers in the Iberian Peninsula.

PubMed

Gómez, Africa; Montero-Pau, Javier; Lunt, David H; Serra, Manuel; Campillo, Sergi

2007-08-01

Recent phylogeographical assessments have consistently shown that continental zooplankton display high levels of population subdivision, despite the high dispersal capacity of their diapausing propagules. As such, there is an apparent paradox between observed cosmopolitanism in the zooplankton that is associated with long-distance dispersal, and strong phylogeographical structures at a regional scale. Such population dynamics, far from migration-drift equilibrium, have been shown in the rotifer species complex Brachionus plicatilis, a group of over a dozen species inhabiting salt lakes and coastal lagoons worldwide. Here we present the mitochondrial DNA phylogeography of one of these species, Brachionus manjavacas, in the Iberian Peninsula, where it often co-occurs with the morphologically similar species B. plicatilis sensu stricto. We obtained sequences from 233 individuals from diapausing eggs and clonal cultures from 16 lakes in the Iberian Peninsula, and a Tunisian lake. Two strongly supported deep mitochondrial DNA clades were found (A and B). Phylogenetic and nested clade analysis showed that clade A has a strong phylogeographical structure, with a strong similarity of phylogeographical patterns between B. manjavacas clade A and B. plicatilis s.s. These include (i) signatures of allopatric fragmentation between central and southern populations, and (ii) range expansions in the Iberian Peninsula, both likely to have occurred during the Pleistocene. We find evidence for a glacial refugium in the Guadiana basin. Clades A and B co-occurred in several of these lakes because of range expansion and secondary contact between both clades. The co-occurrence between B. plicatilis s.s. and B. manjavacas is not recent, and both species might have experienced similar environmental challenges during the Pleistocene. The strong correlation of genetic and geographical distance found suggests that historical events can lead to such correlation, mirroring the effects of

Biogeography of Iberian freshwater fishes revisited: The roles of historical versus contemporary constraints

USGS Publications Warehouse

Filipe, Ana F.; Araújo, Miguel B.; Doadrio, Ignacio; Angermeier, Paul L.; Collares-Pereira, Maria J.

2009-01-01

Main conclusions The results support the hypothesis that historical factors exert greater constraints on native freshwater fish assemblages in the Iberian Peninsula than do current environmental factors. After examining patterns of assemblage variation across space, as evidenced by the biogeographical provinces, we discuss the likely dispersal and speciation events that underlie these patterns. 

Influence of finite-time Lyapunov exponents on winter precipitation over the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Garaboa-Paz, Daniel; Lorenzo, Nieves; Pérez-Muñuzuri, Vicente

2017-05-01

Seasonal forecasts have improved during the last decades, mostly due to an increase in understanding of the coupled ocean-atmosphere dynamics, and the development of models able to predict the atmosphere variability. Correlations between different teleconnection patterns and severe weather in different parts of the world are constantly evolving and changing. This paper evaluates the connection between winter precipitation over the Iberian Peninsula and the large-scale tropospheric mixing over the eastern Atlantic Ocean. Finite-time Lyapunov exponents (FTLEs) have been calculated from 1979 to 2008 to evaluate this mixing. Our study suggests that significant negative correlations exist between summer FTLE anomalies and winter precipitation over Portugal and Spain. To understand the mechanisms behind this correlation, summer anomalies of the FTLE have also been correlated with other climatic variables such as the sea surface temperature (SST), the sea level pressure (SLP) or the geopotential. The East Atlantic (EA) teleconnection index correlates with the summer FTLE anomalies, confirming their role as a seasonal predictor for winter precipitation over the Iberian Peninsula.

Efficiency of mitochondrial DNA restriction analysis and RAPD-PCR to characterize yeasts growing on dry-cured Iberian ham at the different geographic areas of ripening.

PubMed

Andrade, María J; Rodríguez, Mar; Casado, Eva; Córdoba, Juan J

2010-03-01

The efficiency of mitochondrial DNA (mtDNA) restriction analysis and random amplification of polymorphic DNA (RAPD)-PCR to characterize yeasts growing on dry-cured Iberian ham was evaluated. Besides, the distribution of the main species and biotypes of yeasts in the different ripening areas of this product was investigated. MtDNA restriction analysis allowed yeast characterization at species and strain level. RAPD-PCR with the primers (GACA)(4) and (GAC)(5) was inappropriate for characterization at species level. Most of the mtDNA restriction patterns detected in dry-cured Iberian ham were consistent with Debaryomyces hansenii. Several yeasts biotypes were associated to specific geographic areas of dry-cured Iberian ham ripening. Copyright 2009 Elsevier Ltd. All rights reserved.

WLCI researchers employ new approaches to help managers conserve deer migrations

USGS Publications Warehouse

Allen, Leslie A.; Kauffman, Matthew J.

2012-01-01

Elk, mule deer, pronghorn antelope, moose, and bighorn sheep are iconic animals of the American West. These hooved animals, known as ungulates, commonly travel 30–60 miles between seasonal ranges. These migrations between winter and summer ranges are vital for survival and reproduction. As habitat fragmentation continues, the conservation of ungulate migration routes has received considerable attention in the West and across the globe. For example, it is estimated that many ungulate migration routes in the Greater Yellowstone Ecosystem have already been lost. The traditional migration routes of Wyoming ungulates are threatened by unprecedented levels of energy development and by increasing levels of rural ranchette development (including fences, structures, and roads). In the past, migration corridors have been mapped based primarily on the expert opinions of state game managers, but long-term conservation of Wyoming's ungulate migration routes requires a better understanding of migration ecology and more sophisticated management tools. Wyoming Landscape Conservation Initiative (WLCI) researchers investigated the migration of a large mule deer herd across the Dad and Wild Horse winter ranges in southwest Wyoming, where 2,000 gas wells and 1,609 kilometers of pipelines and roads have been proposed for development.

Poor horse traders: large mammals trade survival for reproduction during the process of feralization

PubMed Central

Grange, Sophie; Duncan, Patrick; Gaillard, Jean-Michel

2009-01-01

We investigated density dependence on the demographic parameters of a population of Camargue horses (Equus caballus), individually monitored and unmanaged for eight years. We also analysed the contributions of individual demographic parameters to changes in the population growth rates. The decrease in resources caused a loss of body condition. Adult male survival was not affected, but the survival of foals and adult females decreased with increasing density. Prime-aged females maintained high reproductive performance at high density, and their survival decreased. The higher survival of adult males compared with females at high density presumably results from higher investment in reproduction by mares. The high fecundity in prime-aged females, even when at high density, may result from artificial selection for high reproductive performance, which is known to have occurred in all the major domestic ungulates. Other studies suggest that feral ungulates including cattle and sheep, as these horses, respond differently from wild ungulates to increases in density, by trading adult survival for reproduction. As a consequence, populations of feral animals should oscillate more strongly than their wild counterparts, since they should be both more invasive (as they breed faster), and more sensitive to harsh environmental conditions (as the population growth rate of long-lived species is consistently more sensitive to a given proportional change in adult survival than to the same change in any other vital rate). If this principle proves to be general, it has important implications for management of populations of feral ungulates. PMID:19324787

High resolution projections for the western Iberian coastal low level jet in a changing climate

NASA Astrophysics Data System (ADS)

Soares, Pedro M. M.; Lima, Daniela C. A.; Cardoso, Rita M.; Semedo, Alvaro

2017-09-01

The Iberian coastal low-level jet (CLLJ) is one of the less studied boundary layer wind jet features in the Eastern Boundary Currents Systems (EBCS). These regions are amongst the most productive ocean ecosystems, where the atmosphere-land-ocean feedbacks, which include marine boundary layer clouds, coastal jets, upwelling and inland soil temperature and moisture, play an important role in defining the regional climate along the sub-tropical mid-latitude western coastal areas. Recently, the present climate western Iberian CLLJ properties were extensively described using a high resolution regional climate hindcast simulation. A summer maximum frequency of occurrence above 30 % was found, with mean maximum wind speeds around 15 ms-1, between 300 and 400 m heights (at the jet core). Since the 1990s the climate change impact on the EBCS is being studied, nevertheless some lack of consensus still persists regarding the evolution of upwelling and other components of the climate system in these areas. However, recently some authors have shown that changes are to be expected concerning the timing, intensity and spatial homogeneity of coastal upwelling, in response to future warming, especially at higher latitudes, namely in Iberia and Canaries. In this study, the first climate change assessment study regarding the Western Iberian CLLJ, using a high resolution (9 km) regional climate simulation, is presented. The properties of this CLLJ are studied and compared using two 30 years simulations: one historical simulation for the 1971-2000 period, and another simulation for future climate, in agreement with the RCP8.5 scenario, for the 2071-2100 period. Robust and consistent changes are found: (1) the hourly frequency of occurrence of the CLLJ is expected to increase in summer along the western Iberian coast, from mean maximum values of around 35 % to approximately 50 %; (2) the relative increase of the CLLJ frequency of occurrence is higher in the north off western Iberia; (3

Gram-positive, catalase-positive cocci from dry cured Iberian ham and their enterotoxigenic potential.

PubMed Central

Rodríguez, M; Núñez, F; Córdoba, J J; Bermúdez, E; Asensio, M A

1996-01-01

Iberian ham is an uncooked, cured meat product ripened under natural uncontrolled conditions for 18 to 24 months. Gram-positive, catalase-positive cocci are the main microbial population in Iberian ham for most of the ripening time. Since some of these organisms are able to produce enterotoxins, adequate characterization and toxicological study are needed. For this, 1,327 gram-positive, catalase-positive cocci, isolated from Iberian hams at different stages and locations, were characterized by physiological and biochemical tests. Selected isolates were further characterized by guanine-cytosine (G+C) content and restriction enzyme analysis of genes coding for 16S rRNA. The toxigenic potential of these organisms was tested with specific DNA gene probes for staphylococcal enterotoxins A, B, C, and D and confirmed by semiquantitative sandwich enzyme immunoassay. The majority of the isolates were identified as Staphylococcus spp. and Micrococcus spp. Non-identified gram-positive, catalase-positive cocci which were moderately halophilic and showed a 42 to 52% G+C content were detected. A great variety of staphylococcal strains were found within the different species at any sampling time. Two strains of Staphylococcus xylosus, one Staphylococcus cohnii strain, and four of the non-identified organisms with 42 to 52% G+C contents hybridized with some of the DNA probes for C and D staphylococcal enterotoxin genes. S. xylosus hybridizing with C-enterotoxin probe reacted with both C and D enterotoxins in the immunological test. In addition, enterotoxin D was confirmed in the nonidentified strains. Some toxigenic organisms were isolated from the final product, posing a health hazard for the consumer. PMID:8787389

Daily gridded datasets of snow depth and snow water equivalent for the Iberian Peninsula from 1980 to 2014

NASA Astrophysics Data System (ADS)

Alonso-González, Esteban; López-Moreno, J. Ignacio; Gascoin, Simon; García-Valdecasas Ojeda, Matilde; Sanmiguel-Vallelado, Alba; Navarro-Serrano, Francisco; Revuelto, Jesús; Ceballos, Antonio; Jesús Esteban-Parra, María; Essery, Richard

2018-02-01

We present snow observations and a validated daily gridded snowpack dataset that was simulated from downscaled reanalysis of data for the Iberian Peninsula. The Iberian Peninsula has long-lasting seasonal snowpacks in its different mountain ranges, and winter snowfall occurs in most of its area. However, there are only limited direct observations of snow depth (SD) and snow water equivalent (SWE), making it difficult to analyze snow dynamics and the spatiotemporal patterns of snowfall. We used meteorological data from downscaled reanalyses as input of a physically based snow energy balance model to simulate SWE and SD over the Iberian Peninsula from 1980 to 2014. More specifically, the ERA-Interim reanalysis was downscaled to 10 km × 10 km resolution using the Weather Research and Forecasting (WRF) model. The WRF outputs were used directly, or as input to other submodels, to obtain data needed to drive the Factorial Snow Model (FSM). We used lapse rate coefficients and hygrobarometric adjustments to simulate snow series at 100 m elevations bands for each 10 km × 10 km grid cell in the Iberian Peninsula. The snow series were validated using data from MODIS satellite sensor and ground observations. The overall simulated snow series accurately reproduced the interannual variability of snowpack and the spatial variability of snow accumulation and melting, even in very complex topographic terrains. Thus, the presented dataset may be useful for many applications, including land management, hydrometeorological studies, phenology of flora and fauna, winter tourism, and risk management. The data presented here are freely available for download from Zenodo (https://doi.org/10.5281/zenodo.854618). This paper fully describes the work flow, data validation, uncertainty assessment, and possible applications and limitations of the database.

Masticatory motor patterns in ungulates: a quantitative assessment of jaw-muscle coordination in goats, alpacas and horses.

PubMed

Williams, Susan H; Vinyard, Christopher J; Wall, Christine E; Hylander, William L

2007-04-01

We investigated patterns of jaw-muscle coordination during rhythmic mastication in three species of ungulates displaying the marked transverse jaw movements typical of many large mammalian herbivores. In order to quantify consistent motor patterns during chewing, electromyograms were recorded from the superficial masseter, deep masseter, posterior temporalis and medial pterygoid muscles of goats, alpacas and horses. Timing differences between muscle pairs were evaluated in the context of an evolutionary model of jaw-muscle function. In this model, the closing and food reduction phases of mastication are primarily controlled by two distinct muscle groups, triplet I (balancing-side superficial masseter and medial pterygoid and working-side posterior temporalis) and triplet II (working-side superficial masseter and medial pterygoid and balancing-side posterior temporalis), and the asynchronous activity of the working- and balancing-side deep masseters. The three species differ in the extent to which the jaw muscles are coordinated as triplet I and triplet II. Alpacas, and to a lesser extent, goats, exhibit the triplet pattern whereas horses do not. In contrast, all three species show marked asynchrony of the working-side and balancing-side deep masseters, with jaw closing initiated by the working-side muscle and the balancing-side muscle firing much later during closing. However, goats differ from alpacas and horses in the timing of the balancing-side deep masseter relative to the triplet II muscles. This study highlights interspecific differences in the coordination of jaw muscles to influence transverse jaw movements and the production of bite force in herbivorous ungulates.

Speciation of Iberian diving beetles in Pleistocene refugia (Coleoptera, Dytiscidae).

PubMed

Ribera, Ignacio; Vogler, Alfried P

2004-01-01

The Mediterranean basin is an area of high diversity and endemicity, but the age and origin of its fauna are still largely unknown. Here we use species-level phylogenies based on approximately 1300 base pairs of the genes 16S rRNA and cytochrome oxidase I to establish the relationships of 27 of the 34 endemic Iberian species of diving beetles in the family Dytiscidae, and to investigate their level of divergence. Using a molecular clock approach, 18-19 of these species were estimated to be of Pleistocene origin, with four to six of them from the Late Pleistocene ( approximately 100 000 years). A second, lower speciation frequency peak was assigned to Late Miocene or Early Pliocene. Analysis of the distributional ranges showed that endemic species placed in the tip nodes of the trees are significantly more likely to be allopatric with their sisters than endemic species at lower node levels. Allopatric sister species are also significantly younger than sympatric clades, in agreement with an allopatric mode of speciation and limited subsequent range movement. These results strongly suggest that for some taxa Iberian populations were isolated during the Pleistocene long enough to speciate, and apparently did not expand their ranges to recolonize areas north of the Pyrenees. This is in contradiction to observations from fossil beetles in areas further north, which document large range movements associated with the Pleistocene glacial cycles hypothesized to suppress population isolation and allopatric speciation.

Herbivore effects on productivity vary by guild: cattle increase mean productivity while wildlife reduce variability.

PubMed

Charles, Grace K; Porensky, Lauren M; Riginos, Corinna; Veblen, Kari E; Young, Truman P

2017-01-01

Wild herbivores and livestock share the majority of rangelands worldwide, yet few controlled experiments have addressed their individual, additive, and interactive impacts on ecosystem function. While ungulate herbivores generally reduce standing biomass, their effects on aboveground net primary production (ANPP) can vary by spatial and temporal context, intensity of herbivory, and herbivore identity and species richness. Some evidence indicates that moderate levels of herbivory can stimulate aboveground productivity, but few studies have explicitly tested the relationships among herbivore identity, grazing intensity, and ANPP. We used a long-term exclosure experiment to examine the effects of three groups of wild and domestic ungulate herbivores (megaherbivores, mesoherbivore wildlife, and cattle) on herbaceous productivity in an African savanna. Using both field measurements (productivity cages) and satellite imagery, we measured the effects of different herbivore guilds, separately and in different combinations, on herbaceous productivity across both space and time. Results from both productivity cage measurements and satellite normalized difference vegetation index (NDVI) demonstrated a positive relationship between mean productivity and total ungulate herbivore pressure, driven in particular by the presence of cattle. In contrast, we found that variation in herbaceous productivity across space and time was driven by the presence of wild herbivores (primarily mesoherbivore wildlife), which significantly reduced heterogeneity in ANPP and NDVI across both space and time. Our results indicate that replacing wildlife with cattle (at moderate densities) could lead to similarly productive but more heterogeneous herbaceous plant communities in rangelands. © 2016 by the Ecological Society of America.

UV filters bioaccumulation in fish from Iberian river basins.

PubMed

Gago-Ferrero, Pablo; Díaz-Cruz, M Silvia; Barceló, Damià

2015-06-15

The occurrence of eight organic UV filters (UV-Fs) was assessed in fish from four Iberian river basins. This group of compounds is extensively used in cosmetic products and other industrial goods to avoid the damaging effects of UV radiation, and has been found to be ubiquitous contaminants in the aquatic ecosystem. In particular, fish are considered by the scientific community to be the most feasible organism for contamination monitoring in aquatic ecosystems. Despite that, studies on the bioaccumulation of UV-F are scarce. In this study fish samples from four Iberian river basins under high anthropogenic pressure were analysed by liquid chromatography-tandem mass spectrometry (HPLC-MS/MS). Benzophenone-3 (BP3), ethylhexyl methoxycinnamate (EHMC), 4-methylbenzylidene camphor (4MBC) and octocrylene (OC) were the predominant pollutants in the fish samples, with concentrations in the range of ng/g dry weight (d.w.). The results indicated that most polluted area corresponded to Guadalquivir River basin, where maximum concentrations were found for EHMC (241.7 ng/gd.w.). Sediments from this river basin were also analysed. Lower values were observed in relation to fish for OC and EHMC, ranging from below the limits of detection to 23 ng/gd.w. Accumulation levels of UV-F in the fish were used to calculate biota-sediment accumulation factors (BSAFs). These values were always below 1, in the range of 0.04-0.3, indicating that the target UV-Fs are excreted by fish only to some extent. The fact that the highest concentrations were determined in predators suggests that biomagnification of UV-F may take place along the freshwater food web. Copyright © 2015. Published by Elsevier B.V.

The effects of prescribed fire and ungulate herbivory and 7 years postburn in the upland bitterbrush (Purshia tridentata) communities of Rocky Mountain National Park, Colorado

Treesearch

Kelly Nesvacil; Charles E. Olmsted

2008-01-01

A controlled, manipulative study utilizing exclosures was initiated in 1994 by Zeigenfuss and others (2002) to assess the effects of prescribed fire and ungulate herbivory in the bitterbrush communities of Rocky Mountain National Park (RMNP). Four sites were chosen randomly from all available bitterbrush communities in RMNP wherein exclosures were erected (March/May...

Disentangling migratory routes and wintering grounds of Iberian near-threatened European Rollers Coracias garrulus.

PubMed

Rodríguez-Ruiz, Juan; de la Puente, Javier; Parejo, Deseada; Valera, Francisco; Calero-Torralbo, Miguel A; Reyes-González, José M; Zajková, Zuzana; Bermejo, Ana; Avilés, Jesús M

2014-01-01

Long-distance migrants are suffering drastic declines in the last decades. Causes beneath this problem are complex due to the wide spatial and temporal scale involved. We aim to reveal migratory routes, stopover areas, wintering grounds, and migratory strategies for the most southwestern populations of the near-threatened European Roller Coracias garrulus in order to identify conservation key areas for the non-breeding stage of this species. To this end, we used tracking data from seven satellite transmitters fitted to birds breeding in different populations throughout the Iberian Peninsula and four geolocators fitted to individuals in a southeastern Iberian population. Precise satellite data were used to describe daily activity patterns and speed in relation to the main regions crossed during the migration. Individuals from the most southwestern Iberian populations made a detour towards the Atlantic African coast whereas those from northeastern populations followed a straight north-to-south route. We identified important stopover areas in the Sahel belt, mainly in the surroundings of the Lake Chad, and wintering grounds on southwestern Africa farther west than previously reported for the species. Concerning the migratory strategy, satellite data revealed: 1) a mainly nocturnal flying activity, 2) that migration speed depended on the type of crossed habitat, with higher average speed while crossing the desert; and 3) that the migration was slower and lasted longer in autumn than in spring. The studied populations showed weak migratory connectivity, suggesting the confluence of birds from a wide range of breeding grounds in a restricted wintering area. Therefore, we suggest to target on defining precisely key areas for this species and identifying specific threats in them in order to develop an appropriate global conservation programme for the European Roller.

Identification and characterisation of regional ozone episodes in the southwest of the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Domínguez-López, D.; Vaca, F.; Hernández-Ceballos, M. A.; Bolívar, J. P.

2015-02-01

Tropospheric ozone is considered one of the most significant air pollutants due to its negative effects on human health, agricultural crops, ecosystems and climate. The features of the southwest of the Iberian Peninsula (high temperatures and high solar radiation, the presence of the Guadalquivir basin and sources of precursors) favour the occurrence of episodes of high concentrations that cause exceedances of legal thresholds with relative frequency. Despite this, no study examining regional ozone episodes has been carried out in this region until now. In the present work a surface hourly ozone dataset (2003-2006) measured at 11 representative stations located in the southwest of the Iberian Peninsula (western Andalusia) was analysed in order to identify and characterise, for the first time, the regional ozone episodes that occur in this area. Using a statistical criterion, eight regional episodes were identified and analysed. The analysis of synoptic weather patterns revealed that these episodes occur in conjunction with two different synoptic conditions (high surface pressure either close to the British Isles or over the Atlantic Ocean). Both conditions generate weak isobaric surface pressure over the Iberian Peninsula, favouring the establishment of easterly winds at 500 m and the development of winds with two main prevailing directions (southwest-northwest, following the Guadalquivir basin) in the study area. During episodic days ozone follows a similar daily cycle to that observed on non-episode summer days, although the levels reached during the former are higher. In both cases, a direct relationship between the daily ozone cycle and the local wind regimen was not observed. This therefore seems to indicate that the daily cycle followed by ozone is mainly regulated by the precursor emissions produced in the environment, by the temperature changes taking place during the day and by the influence of the lower troposphere during anticyclonic weather conditions.

An endemic Taenia from South America: validation of T. Talicei Dollfus, 1960 (Cestoda: Taeniidae) with characterization of metacestodes and adults

USDA-ARS?s Scientific Manuscript database

Taeniid tapeworms are characteristic parasites in both domesticated and wild carnivores and life cycles are completed through predator-prey associations with rodent, lagomorph or ungulate intermediate hosts that harbor infective larvae. Globally these tapeworms contribute to morbidity and mortality ...

The Late Cretaceous Alkaline Igneous Province in the Iberian Peninsula, and its tectonic significance

NASA Astrophysics Data System (ADS)

Rock, N. M. S.

1982-04-01

The Iberian Province consists of the following: the three subvolcanic, syenitic, major intrusive complexes of Monchique, Sines and Sintra in W. and SW Portugal, together with their basanitic/lamprophyric minor intrusive suites; basanitic volcanic complexes around Lisbon; at least some of a widespread suite of basanitic to theralitic minor intrusives in west central Portugal; about 80 small basanitic/lamprophyric to nepheline syenitic intrusions scattered through the Pyrenees, NE Spain, the French Corbières, and off the coast of NW Spain; and the Ormonde Seamount of the Gorringe Bank off the SW coast of Portugal. Most of these occurrences have been dated isotopically or from field evidence as Late Cretaceous. Geological and petrological details of the various occurrences are compiled and reviewed. Primary basanitic magmas were probably parental to the entire Province, and generated syenitic magmas by differentiation processes; oversaturated rocks were produced by alkali loss and perhaps also by crustal involvement. The Iberian Province is related to the opening of the N. Atlantic, specifically that of the Bay of Biscay.

A New Species of Haplophyllum A. Juss. (Rutaceae) from the Iberian Peninsula: Evidence from Morphological, Karyological and Molecular Analyses

PubMed Central

NAVARRO, F. B.; SUÁREZ-SANTIAGO, V. N.; BLANCA, G.

2004-01-01

• Background and Aims The discovery of a new species, Haplophyllum bastetanum F.B. Navarro, V.N. Suárez-Santiago & Blanca sp. nov., in the south-east of Spain has prompted the comparative study of species of the Iberian Peninsula, and others related, through morphological, cytogenetic, molecular, distributional and ecological characterization. • Methods The morphological study involved a quantitative analysis of the species present in the Iberian Peninsula and a comparative analysis of the morphological characteristics between H. bastetanum and other related species. Mitotic analyses were made with root meristems taken from germinating seeds. Phylogenetic analyses of the internal transcribed spacer sequences of nuclear ribosomal DNA were performed using neighbour-joining (NJ) and maximum-parsimony methods. • Key Results Haplophyllum bastetanum is a diploid species (2n = 18) distinguished primarily for its non-trifoliate glabrous leaves, lanceolate sepals, dark-green petals with a dorsal band of hairs, and a highly hairy ovary with round-apex locules. The other two Iberian species (H. linifolium and H. rosmarinifolium) are tetraploid (2n = 36) and have yellow petals. Both phylogenetic methods generated a well-supported clade grouping H. linifolium with H. rosmarinifolium. In the NJ tree, the H. linifolium–H. rosmarinifolium clade is a sister group to H. bastetanum, while in the parsimony analysis this occurred only when the gaps were coded as a fifth base and the characters were reweighted according to the rescaled consistency index. This latter group is supported by the sequence divergence among taxa. • Conclusions The phylogenies established from DNA sequences together with morphological and cytogenetic analyses support the separation of H. bastetanum as a new species. The results suggest that the change in the number of chromosomes may be the key mechanism of speciation of the genus Haplophyllum in the Iberian Peninsula. An evolutionary scheme for them

Assessing the Snow Advance Index as potential predictor of winter streamflow of the Iberian Peninsula Rivers

NASA Astrophysics Data System (ADS)

Hidalgo-Muñoz, José Manuel; García-Valdecasas-Ojeda, Matilde; Raquel Gámiz-Fortis, Sonia; Castro-Díez, Yolanda; Jesús Esteban-Parra, María

2015-04-01

This study examines the ability of the Eurasian snow cover increase during the previous October as potential predictor of winter streamflow in the Iberian Peninsula Rivers. The streamflow data base used has been provided by the Center for Studies and Experimentation of Public Works, CEDEX. Series from gauging stations and reservoirs with less than 10% of missing data (filled by regression with well correlated neighboring stations) have been considered. The homogeneity of these series has been evaluated through the Pettit test and degree of human alteration by the Common Area Index. The application of these criteria led to the selection of 382 streamflow time series homogeneously distributed over the Iberian Peninsula, covering the period 1975-2008. For this streamflow data, winter seasonal values were obtained by averaging the monthly values from January to March. The recently proposed Snow Advance Index (SAI) was employed to monitor the snow cover increase during previous October. The stability of the correlations was the criterion followed to establish if SAI could be considered as potential predictor of winter streamflow at each gauging station. Winter streamflow is predicted using a linear regression model. A leave-one-out cross validation approach was adopted to create calibration and validations subsets. The correlation coefficient (RHO), Root Mean Square Error Skill Score (RMSESS) and the Gerrity Skill Score (GSS) were used to evaluate the forecasting skill. From the 382 stations evaluated, significant and stable correlations with SAI were found in 238 stations, covering most of the IP (except for the Cantabrian and Mediterranean slopes). Some forecasting skill was found in 223 of them, being this skill moderate (RHO>0.44, RMSESS>10%, GSS>0.2) in 141 of them, and particularly good (RHO>0.5, RMSESS>20%, GSS>0.4) in 23. This study shows that the SAI of previous October is a reliable predictor of following winter streamflow for the Iberian Peninsula Rivers

Cryopreservation of Iberian pig spermatozoa. Comparison of different freezing extenders based on post-thaw sperm quality.

PubMed

De Mercado, Eduardo; Rodríguez, Ana; Gómez, Emilio; Sanz, Elena

2010-03-01

The aim of this study was to evaluate the cryoprotective effect of different freezing extenders against cryopreservation injuries on Iberian boar sperm. The sperm-rich fraction was collected and pooled from six sexually mature Iberian boars, and was frozen in different extenders containing glucose, lactose or fructose as sugar source and including Orvus ES Paste only in the freezing extender-2 (Glucose; Lactose and Fructose) or in both freezing extenders (Glucose2; Lactose2 and Fructose2). During the cryopreservation process, the supernatant was removed after the centrifugation step, then was extended with freezing extender-1 for the equilibration period and with freezing extender-2 immediately before freezing. Post-thaw sperm characteristics, such as plasma membrane integrity (SYBR-14/PI), mitochondrial function (Rhodamine 123) and acrosome integrity (NAR), were monitored. Overall sperm motility and the individual kinematic parameters of motile spermatozoa (assessed by the computer-aided sperm analysis system Sperm Class Analyzer [SCA]) were recorded in the different experimental treatments. Measurements were taken at 30 and 150 min post-thaw. The state of the acrosome after thawing did not show significant differences between the freezing extenders studied. Freezing-thawing caused a significant decrease (P<0.001) in plasma membrane integrity and in mitochondrial activity in the spermatozoa frozen with Orvus ES Paste in both freezing extenders. Furthermore, spermatozoa frozen with Orvus ES Paste in both freezing extenders exhibited lower (P<0.05) motility and kinematic parameters than those frozen in the absence of Orvus ES Paste in the first freezing extender. The spermatozoa frozen with the Lactose extender and with Orvus ES Paste only in the second freezing extender showed a better evolution of the motility and kinematic characteristics (P<0.05) over time. The deterioration in post-thaw sperm motility and kinematic parameters were concurrent with reduced sperm

Different levels of hsp70 and hsc70 mRNA expression in Iberian fish exposed to distinct river conditions

PubMed Central

Jesus, Tiago F.; Inácio, Ângela; Coelho, Maria M.

2013-01-01

Comprehension of the mechanisms by which ectotherms, such as fish, respond to thermal stress is paramount for understanding the threats that environmental changes may pose to wild populations. Heat shock proteins are molecular chaperones with an important role in several stress conditions such as high temperatures. In the Iberian Peninsula, particularly in Portugal, freshwater fish of the genus Squalius are subject to daily and seasonal temperature variations. To examine the extent to which different thermal regimes influence the expression patterns of hsp70 and hsc70 transcripts we exposed two species of Squalius (S. torgalensis and S. carolitertii) to different temperatures (20, 25, 30 and 35 °C). At 35 °C, there was a significant increase in the expression of hsp70 and hsc70 in the southern species, S. torgalensis, while the northern species, S. carolitertii, showed no increase in the expression of these genes; however, some individuals of the latter species died when exposed to 35 °C. These results suggest that S. torgalensis may cope better with harsher temperatures that are characteristic of this species natural environment; S. carolitertii, on the other hand, may be unable to deal with the extreme temperatures faced by the southern species. PMID:23569409

Convergence of Afrotherian and Laurasiatherian Ungulate-Like Mammals: First Morphological Evidence from the Paleocene of Morocco

PubMed Central

Gheerbrant, Emmanuel; Filippo, Andrea; Schmitt, Arnaud

2016-01-01

Molecular-based analyses showed that extant “ungulate” mammals are polyphyletic and belong to the two main clades Afrotheria (Paenungulata) and Laurasiatheria (Euungulata: Cetartiodactyla-Perissodactyla). However, paleontological and neontological studies hitherto failed to demonstrate the morphological convergence of African and Laurasian “ungulate” orders. They support an “Altungulata” group including the Laurasian order Perissodactyla and the African superorder Paenungulata and characterized especially by quadritubercular and bilophodont molars adapted for a folivorous diet. We report new critical fossils of one of the few known African condylarth-like mammal, the enigmatic Abdounodus from the middle Paleocene of Morocco. They show that Abdounodus and Ocepeia display key intermediate morphologies refuting the homology of the fourth main cusp of upper molars in Paenungulata and Perissodactyla: Paenungulates unexpectedly have a metaconule-derived pseudohypocone, instead of a cingular hypocone. Comparative and functional dental anatomy of Abdounodus demonstrates indeed the convergence of the quadritubercular and bilophodont pattern in “ungulates”. Consistently with our reconstruction of the structural evolution of paenungulate bilophodonty, the phylogenetic analysis relates Abdounodus and Ocepeia to Paenungulata as stem taxa of the more inclusive new clade Paenungulatomorpha which is distinct from the Perissodactyla and Anthracobunidae. Abdounodus and Ocepeia help to identify the first convincing synapomorphy within the Afrotheria–i.e., the pseudohypocone–that demonstrates the morphological convergence of African and Laurasian ungulate-like placentals, in agreement with molecular phylogeny. Abdounodus and Ocepeia are the only known representatives of the early African ungulate radiation predating the divergence of extant paenungulate orders. Paenungulatomorpha evolved in Africa since the early Tertiary independently from laurasiatherian

First records of Cotylea (Polycladida, Platyhelminthes) for the Atlantic coast of the Iberian Peninsula

PubMed Central

Noreña, Carolina; Marquina, Daniel; Perez, Jacinto; Almon, Bruno

2014-01-01

Abstract A study of polyclad fauna of the Atlantic coast of the Iberian Peninsula was carried out from 2010 to 2013. The paper reports nine new records belonging to three Cotylean families: the family Euryleptidae Lang, 1884, Pseudocerotidae Lang, 1884 and the family Prosthiostomidae Lang, 1884, and describes one new species, Euryleptodes galikias sp. n. PMID:24843268

Serologic survey for antibodies against three genotypes of bovine parainfluenza 3 virus in unvaccinated ungulates in Alabama.

PubMed

Newcomer, Benjamin W; Neill, John D; Galik, Patricia K; Riddell, Kay P; Zhang, Yijing; Passler, Thomas; Velayudhan, Binu T; Walz, Paul H

2017-02-01

OBJECTIVE To determine titers of serum antibodies against 3 genotypes of bovine parainfluenza 3 virus (BPI3V) in unvaccinated ungulates in Alabama. ANIMALS 62 cattle, goats, and New World camelids from 5 distinct herds and 21 captured white-tailed deer. PROCEDURES Serum samples were obtained from all animals for determination of anti-BPI3V antibody titers, which were measured by virus neutralization assays that used indicator (reference) viruses from each of the 3 BPI3V genotypes (BPI3V-A, BPI3V-B, and BPI3V-C). The reference strains were recent clinical isolates from US cattle. Each sample was assayed in triplicate for each genotype. Animals with a mean antibody titer ≤ 2 for a particular genotype were considered seronegative for that genotype. RESULTS Animals seropositive for antibodies against BPI3V were identified in 2 of 3 groups of cattle and the group of New World camelids. The geometric mean antibody titer against BPI3V-B was significantly greater than that for BPI3V-A and BPI3V-C in all 3 groups. All goats, captive white-tailed deer, and cattle in the third cattle group were seronegative for all 3 genotypes of the virus. CONCLUSIONS AND CLINICAL RELEVANCE Results indicated that BPI3V-A may no longer be the predominant genotype circulating among ungulates in Alabama. This may be clinically relevant because BPI3V is frequently involved in the pathogenesis of bovine respiratory disease complex, current vaccines contain antigens against BPI3V-A only, and the extent of cross-protection among antibodies against the various BPI3V genotypes is unknown.

Inferring parturition and neonate survival from movement patterns of female ungulates: a case study using woodland caribou

PubMed Central

DeMars, Craig A; Auger-Méthé, Marie; Schlägel, Ulrike E; Boutin, Stan

2013-01-01

Analyses of animal movement data have primarily focused on understanding patterns of space use and the behavioural processes driving them. Here, we analyzed animal movement data to infer components of individual fitness, specifically parturition and neonate survival. We predicted that parturition and neonate loss events could be identified by sudden and marked changes in female movement patterns. Using GPS radio-telemetry data from female woodland caribou (Rangifer tarandus caribou), we developed and tested two novel movement-based methods for inferring parturition and neonate survival. The first method estimated movement thresholds indicative of parturition and neonate loss from population-level data then applied these thresholds in a moving-window analysis on individual time-series data. The second method used an individual-based approach that discriminated among three a priori models representing the movement patterns of non-parturient females, females with surviving offspring, and females losing offspring. The models assumed that step lengths (the distance between successive GPS locations) were exponentially distributed and that abrupt changes in the scale parameter of the exponential distribution were indicative of parturition and offspring loss. Both methods predicted parturition with near certainty (>97% accuracy) and produced appropriate predictions of parturition dates. Prediction of neonate survival was affected by data quality for both methods; however, when using high quality data (i.e., with few missing GPS locations), the individual-based method performed better, predicting neonate survival status with an accuracy rate of 87%. Understanding ungulate population dynamics often requires estimates of parturition and neonate survival rates. With GPS radio-collars increasingly being used in research and management of ungulates, our movement-based methods represent a viable approach for estimating rates of both parameters. PMID:24324866

Inferring parturition and neonate survival from movement patterns of female ungulates: a case study using woodland caribou.

PubMed

Demars, Craig A; Auger-Méthé, Marie; Schlägel, Ulrike E; Boutin, Stan

2013-10-01

Analyses of animal movement data have primarily focused on understanding patterns of space use and the behavioural processes driving them. Here, we analyzed animal movement data to infer components of individual fitness, specifically parturition and neonate survival. We predicted that parturition and neonate loss events could be identified by sudden and marked changes in female movement patterns. Using GPS radio-telemetry data from female woodland caribou (Rangifer tarandus caribou), we developed and tested two novel movement-based methods for inferring parturition and neonate survival. The first method estimated movement thresholds indicative of parturition and neonate loss from population-level data then applied these thresholds in a moving-window analysis on individual time-series data. The second method used an individual-based approach that discriminated among three a priori models representing the movement patterns of non-parturient females, females with surviving offspring, and females losing offspring. The models assumed that step lengths (the distance between successive GPS locations) were exponentially distributed and that abrupt changes in the scale parameter of the exponential distribution were indicative of parturition and offspring loss. Both methods predicted parturition with near certainty (>97% accuracy) and produced appropriate predictions of parturition dates. Prediction of neonate survival was affected by data quality for both methods; however, when using high quality data (i.e., with few missing GPS locations), the individual-based method performed better, predicting neonate survival status with an accuracy rate of 87%. Understanding ungulate population dynamics often requires estimates of parturition and neonate survival rates. With GPS radio-collars increasingly being used in research and management of ungulates, our movement-based methods represent a viable approach for estimating rates of both parameters.

Environmental and physiological influences to isotopic ratios of N and protein status in a montane ungulate in winter

USGS Publications Warehouse

Gustine, David D.; Barboza, Perry S.; Adams, Layne G.; Wolf, Nathan B.

2014-01-01

Winter severity can influence large herbivore populations through a reduction in maternal proteins available for reproduction. Nitrogen (N) isotopes in blood fractions can be used to track the use of body proteins in northern and montane ungulates. We studied 113 adult female caribou for 13 years throughout a series of severe winters that reduced population size and offspring mass. After these severe winters, offspring mass increased but the size of the population remained low. We devised a conceptual model for routing of isotopic N in blood in the context of the severe environmental conditions experienced by this population. We measured δ15N in three blood fractions and predicted the relative mobilization of dietary and body proteins. The δ15N of the body protein pool varied by 4‰ and 46% of the variance was associated with year. Annual variation in δ15N of body protein likely reflected the fall/early winter diet and winter locations, yet 15% of the isotopic variation in amino acid N was due to body proteins. Consistent isotopic differences among blood N pools indicated that animals tolerated fluxes in diet and body stores. Conservation of body protein in caribou is the result of active exchange among diet and body N pools. Adult females were robust to historically severe winter conditions and prioritized body condition and survival over early investment in offspring. For a vagile ungulate residing at low densities in a predator-rich environment, protein restrictions in winter may not be the primary limiting factor for reproduction.

Environmental and Physiological Influences to Isotopic Ratios of N and Protein Status in a Montane Ungulate in Winter

PubMed Central

Gustine, David D.; Barboza, Perry S.; Adams, Layne G.; Wolf, Nathan B.

2014-01-01

Winter severity can influence large herbivore populations through a reduction in maternal proteins available for reproduction. Nitrogen (N) isotopes in blood fractions can be used to track the use of body proteins in northern and montane ungulates. We studied 113 adult female caribou for 13 years throughout a series of severe winters that reduced population size and offspring mass. After these severe winters, offspring mass increased but the size of the population remained low. We devised a conceptual model for routing of isotopic N in blood in the context of the severe environmental conditions experienced by this population. We measured δ15N in three blood fractions and predicted the relative mobilization of dietary and body proteins. The δ 15N of the body protein pool varied by 4‰ and 46% of the variance was associated with year. Annual variation in δ15N of body protein likely reflected the fall/early winter diet and winter locations, yet 15% of the isotopic variation in amino acid N was due to body proteins. Consistent isotopic differences among blood N pools indicated that animals tolerated fluxes in diet and body stores. Conservation of body protein in caribou is the result of active exchange among diet and body N pools. Adult females were robust to historically severe winter conditions and prioritized body condition and survival over early investment in offspring. For a vagile ungulate residing at low densities in a predator-rich environment, protein restrictions in winter may not be the primary limiting factor for reproduction. PMID:25102057

Environmental and physiological influences to isotopic ratios of N and protein status in a Montane ungulate in winter.

PubMed

Gustine, David D; Barboza, Perry S; Adams, Layne G; Wolf, Nathan B

2014-01-01

Winter severity can influence large herbivore populations through a reduction in maternal proteins available for reproduction. Nitrogen (N) isotopes in blood fractions can be used to track the use of body proteins in northern and montane ungulates. We studied 113 adult female caribou for 13 years throughout a series of severe winters that reduced population size and offspring mass. After these severe winters, offspring mass increased but the size of the population remained low. We devised a conceptual model for routing of isotopic N in blood in the context of the severe environmental conditions experienced by this population. We measured δ15N in three blood fractions and predicted the relative mobilization of dietary and body proteins. The δ 15N of the body protein pool varied by 4‰ and 46% of the variance was associated with year. Annual variation in δ15N of body protein likely reflected the fall/early winter diet and winter locations, yet 15% of the isotopic variation in amino acid N was due to body proteins. Consistent isotopic differences among blood N pools indicated that animals tolerated fluxes in diet and body stores. Conservation of body protein in caribou is the result of active exchange among diet and body N pools. Adult females were robust to historically severe winter conditions and prioritized body condition and survival over early investment in offspring. For a vagile ungulate residing at low densities in a predator-rich environment, protein restrictions in winter may not be the primary limiting factor for reproduction.

Aspen response to prescribed fire and wild ungulate herbivory

Treesearch

Steve Kilpatrick; Diane Abendroth

2001-01-01

Land management agencies in northwest Wyoming have implemented an active prescribed fire program to address historically altered fire regimes, regenerate aspen, and improve overall watershed functions. Treated clones are susceptible to extensive browsing from elk concentrated on supplemental feedgrounds and from wintering moose. Previous attempts at fire-induced aspen...

Ecological evaluation of the abundance and effects of elk herbivory in Rocky Mountain National Park, Colorado, 1994-1999

USGS Publications Warehouse

Singer, Francis J.; Zeigenfuss, Linda C.

2002-01-01

Several National Park Service units in the Intermountain region possess a number of closely related management needs relative to the abundance of wild ungulates and their herbivory effects on plants and ecosystem processes. In 1993, the then National Biological Service (NBS) - now U.S. Geological Survey, Biological Resources Discipline (USGS, BRD)­ initiated a series of research studies in four park units in the Intermountain West., into the abundance and effects of ungulates on park ecosystems. Each of these parks received a number of similar research study elements including: (a) a number of new ungulate grazing exclosures (n = 12-21 exclosures per park); (b) aerial survey sightability models to estimate population sizes of ungulates; (e) measures of biomass production and consumption rates near the exclosures and across the landscape; (d) studies of the effects of the grazing on plant abundance, species diversity, and ecosystem effects; and (e) computer model simulations (SAVANNA) of the effects on the ecosystem and plant resources of different ungulate management scenarios. One park unit, Rocky Mountain National Park, Colorado, received funding from the U.S. Geological Survey (USGS, BRD) and parallel funding from NPS for an intensive research study of the effects of elk on the park ecosystems.

Evaluating the long-term management of introduced ungulates to protect the palila, an endangered bird, and its critical habitat in subalpine forest of Mauna Kea, Hawai‘i

Treesearch

Paul C. Banko; Steven C. Hess; Paul G. Scowcroft; Chris Farmer; James D. Jacobi; Robert M. Stephens; Richard J. Camp; David L. Leonard; Kevin W. Brinck; J. O. Juvik; S. P. Juvik

2014-01-01

Under the multiple-use paradigm, conflicts may arise when protection of an endangered species must compete with other management objectives. To resolve such a conflict in the Critical Habitat of the endangered Hawaiian honeycreeper, palila (Loxioides bailleui), federal courts ordered the eradication of introduced ungulates responsible for damaging...

The climate of the Common Era off the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Abrantes, Fátima; Rodrigues, Teresa; Rufino, Marta; Salgueiro, Emília; Oliveira, Dulce; Gomes, Sandra; Oliveira, Paulo; Costa, Ana; Mil-Homens, Mário; Drago, Teresa; Naughton, Filipa

2017-12-01

The Mediterranean region is a climate hot spot, sensitive not only to global warming but also to water availability. In this work we document major temperature and precipitation changes in the Iberian Peninsula and margin during the last 2000 years and propose an interplay of the North Atlantic internal variability with the three atmospheric circulation modes (ACMs), (North Atlantic Oscillation (NAO), east atlantic (EA) and Scandinavia (SCAND)) to explain the detected climate variability. We present reconstructions of sea surface temperature (SST derived from alkenones) and on-land precipitation (estimated from higher plant n-alkanes and pollen data) in sedimentary sequences recovered along the Iberian Margin between the south of Portugal (Algarve) and the northwest of Spain (Galiza) (36 to 42° N). A clear long-term cooling trend, from 0 CE to the beginning of the 20th century, emerges in all SST records and is considered to be a reflection of the decrease in the Northern Hemisphere summer insolation that began after the Holocene optimum. Multi-decadal/centennial SST variability follows other records from Spain, Europe and the Northern Hemisphere. Warm SSTs throughout the first 1300 years encompass the Roman period (RP), the Dark Ages (DA) and the Medieval Climate Anomaly (MCA). A cooling initiated at 1300 CE leads to 4 centuries of colder SSTs contemporary with the Little Ice Age (LIA), while a climate warming at 1800 CE marks the beginning of the modern/Industrial Era. Novel results include two distinct phases in the MCA: an early period (900-1100 years) characterized by intense precipitation/flooding and warm winters but a cooler spring-fall season attributed to the interplay of internal oceanic variability with a positive phase in the three modes of atmospheric circulation (NAO, EA and SCAND). The late MCA is marked by cooler and relatively drier winters and a warmer spring-fall season consistent with a shift to a negative mode of the SCAND. The Industrial Era

Genetic Fingerprinting of Germplasm Accessions as an Aid for Species Conservation: A Case Study with Borderea chouardii (Dioscoreaceae), One of the Most Critically Endangered Iberian Plants

PubMed Central

SEGARRA-MORAGUES, JOSÉ GABRIEL; IRIONDO, JOSÉ MARÍA; CATALÁN, PILAR

2005-01-01

• Background and Aims Molecular markers have changed previous expectations about germplasm collections of endangered plants, as new perspectives aim at holding a significant representation of all the genetic diversity in the studied species to accomplish further conservation initiatives successfully. Borderea chouardii is a critically endangered allotetraploid dioecious member of Dioscoreaceae, known from a single population in the Iberian pre-Pyrenees. This population was reported to be highly structured into two genetically distinct groups of individuals corresponding to their spatial separation along the vertical cliff where it grows. In 1999, the Spanish Government of Aragón launched the first conservation programme for the ex situ preservation of this species, and since then a seed collection has been conserved at the Germplasm Bank of the Universidad Politécnica de Madrid. However, as some seed samples had not been labelled clearly at the time of collection, their origin was uncertain. • Methods Genetic variation in germplasm accessions of B. chouardii was investigated using microsatellite (simple sequence repeat; SSR) markers. • Key Results The 17 primer pairs used detected 62 SSR alleles in the 46 samples analysed from five different germplasm stocks. Eight alleles scored from the wild population were not detected in the germplasm samples analysed. The relatedness of the germplasm samples to the wild subpopulations through neighbour-joining clustering, principal coordinates analysis (PCO) and assignment tests revealed a biased higher representation of the genetic diversity of the lower cliff (43 samples) subpopulation than that of the upper cliff (three samples). • Conclusions The collection of additional samples from the upper cliff is recommended to achieve a better representation of the genetic diversity of this subpopulation. It is also recommended that these stocks should be managed separately according to their distinct microspatial origin

Geomorphic status of regulated rivers in the Iberian Peninsula.

PubMed

Lobera, G; Besné, P; Vericat, D; López-Tarazón, J A; Tena, A; Aristi, I; Díez, J R; Ibisate, A; Larrañaga, A; Elosegi, A; Batalla, R J

2015-03-01

River regulation by dams modifies flow regimes, interrupts the transfer of sediment through channel networks, and alters downstream bed dynamics, altogether affecting channel form and processes. So far, most studies on the geomorphic impacts of dams are restricted to single rivers, or even single river stretches. In this paper we analyse the geomorphic status of 74 river sites distributed across four large basins in the Iberian Peninsula (i.e. 47 sites located downstream of dams). For this purpose, we combine field data with hydrological data available from water agencies, and analyse historical (1970) and current aerial photographs. In particular, we have developed a Geomorphic Status (GS) index that allows us to assess the physical structure of a given channel reach and its change through time. The GS encompasses a determination of changes in sedimentary units, sediment availability, bar stability and channel flow capacity. Sites are statistically grouped in four clusters based on contrasted physical and climate characteristics. Results emphasise that regulation changes river's flow regime with a generalized reduction of the magnitude and frequency of floods (thus flow competence). This, in addition to the decrease downstream sediment supply, results in the loss of active bars as they are encroached by vegetation, to the point that only reaches with little or no regulation maintain exposed sedimentary deposits. The GS of regulated river reaches is negatively correlated with magnitude of the impoundment (regulation). Heavily impacted reaches present channel stabilization and, in contrast to the hydrological response, the distance and number of tributaries do not reverse the geomorphic impact of the dams. Stabilization limits river dynamics and may contribute to the environmental degradation of the fluvial ecosystem. Overall, results describe the degree of geomorphological alteration experienced by representative Iberian rivers mostly because of regulation

Volumetric runoff coefficients for experimental rural catchments in the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Taguas, Encarnación V.; Molina, Cecilio; Nadal-Romero, Estela; Ayuso, José L.; Casalí, Javier; Cid, Patricio; Dafonte, Jorge; Duarte, Antonio C.; Farguell, Joaquim; Giménez, Rafael; Giráldez, Juan V.; Gómez, Helena; Gómez, Jose A.; González-Hidalgo, J. Carlos; Keizer, J. Jacob; Lucía, Ana; Mateos, Luciano; Rodríguez-Blanco, M. Luz; Schnabel, Sussane; Serrano-Muela, M. Pilar

2015-04-01

Analysis of runoff and peaks therein is essential for designing hydraulic infrastructures and for assessing the hydrological implications of likely scenarios of climate and/or land-use change. Different methods are available to calculate runoff coefficients. For instance, the runoff coefficient of a catchment can be described either as the ratio of total depth of runoff to total depth of rainfall or as the ratio of peak flow to rainfall intensity for the time of concentration (Dhakal et al. 2012). If the first definition is considered, runoff coefficients represent the global effect of different features and states of catchments and its determination requires a suitable analysis according to the objectives pursued (Chow et al., 1988). In this work, rainfall-runoff data and physical attributes from small rural catchments located in the Iberian Peninsula (Portugal and Spain) were examined in order to compare the representative values of runoff coefficients using three different approaches: i) statistical analysis of rainfall-runoff data and their quantiles (Dhakal et al., 2012); ii) probabilistic runoff coefficients from the rank-ordered pairs of observed rainfall-runoff data and their relationships with rainfall depths (Schaake et al., 1967); iii) finally, a multiple linear model based on geomorphological attributes. These catchments exhibit great variety with respect to their natural settings, such as climate, topography and lithology. We present a preliminary analysis of the rainfall-runoff relationships as well as their variability in a complex context such as the Iberian Peninsula where contrasted environmental systems coexist. We also discuss reference parameters representing runoff coefficients commonly included into hydrological models. This study is conceived as the first step to explore further working protocols and modeling gaps in a very susceptible area to the climate change such as the Iberian Peninsula's, where the analysis of runoff coefficients is

Wilde's worlds: Sir William Wilde in Victorian Ireland.

PubMed

McGeachie, J

2016-05-01

Other contributors to this collection have evoked the disparate worlds inhabited by Sir William Wilde. To provide an overall assessment of his career. Looking at the historical conditions that made possible such a career spanning such disparate worlds. Deploying methodologies developed by historians of medicine and sociologists of science, the article brings together Wilde the nineteenth century clinician and Dublin man of science, the Wilde of the Census and of the west of Ireland, William Wilde Victorian medical man and Wilde the Irish medical man-the historian of Irish medical traditions and the biographer of Irish medical men, and William Wilde as an Irish Victorian. A variety of close British Isles parallels can be drawn between Wilde and his cohort in the medical elite of Dublin and their clinical peers in Edinburgh and London both in terms of clinical practice and self-presentation and in terms of the social and political challenges facing their respective ancient regime hegemonies in an age of democratic radicalisation. The shared ideological interests of Wilde and his cohort, however, were also challenged by the socio-political particularities and complexities of Ireland during the first half of the nineteenth century culminating in the catastrophe of the Great Famine. William Wilde saw the practice of scientific medicine as offering a means of deliverance from historical catastrophe for Irish society and invoked a specifically Irish scientific and medical tradition going back to the engagement with the condition of Ireland by enlightened medical men in the seventeenth and eighteenth centuries.

Diversity of gastrointestinal helminths in Dall's sheep and the negative association of the abomasal nematode, Marshallagia marshalli, with fitness indicators

USDA-ARS?s Scientific Manuscript database

Gastrointestinal helminths can have a detrimental effect on the fitness of wild ungulates. Arctic and Subarctic ecosystems are ideal for the study of host-parasite interactions due to the comparatively simple ecological interactions and limited confounding factors. We used a unique dataset collected...

Large bowel fermentation of maize or sorghum-acorn diets fed as a different source of carbohydrates to Landrace and Iberian pigs.

PubMed

Morales, J; Pérez, J F; Martín-Orúe, S M; Fondevila, M; Gasa, J

2002-11-01

Twenty-four finishing pigs (twelve Iberian and twelve Landrace) were used in a growing and slaughtering experiment. Animals were fed two diets differing in their ingredients, maize (diet C) or sorghum-acorn (diet A). At an average weight of 107.0 kg pigs were slaughtered and hindgut digesta sampled to study the effect of breed and diet on large bowel fermentation. Flows of digesta to the hindgut compartment were estimated based on an indigestible flow marker (Cr2O3) and were higher in Iberian than in Landrace pigs (P<0.001), and higher in animals fed diet A than diet C (P=0.07). The higher flows in Iberian pigs were mainly associated with a higher voluntary feed intake (3.50 v. 2.70 kg/d, P<0.01) and lower ileal digestibility of NSP (-12.8 v. 47.8, P<0.01). Differences between diets were mainly associated with a lower ileal digestibility of starch from diet A (89.2 v. 96.9 %, P=0.06), although no differences in the resistant starch content were observed in vitro. Fermentation of different carbohydrates through the large bowel showed that NSP-glucose had lower digestibility in Iberian than in Landrace pigs (62.5 v. 94.2 %, P<0.001), but no differences were observed in starch, or other NSP-fibre fractions (arabinose, xylose and galactose). The type and amount of carbohydrates reaching the large bowel were related to the diet but also to breed, and promoted differences in the fermentative activity associated with different volatile fatty acid patterns and changes in microbial enzymic activity.

Subsurface geomicrobiology of the Iberian Pyritic Belt, a terrestrial analogue of Mars

NASA Astrophysics Data System (ADS)

Amils, Ricardo

Terrestrial subsurface geomicrobiology is a matter of growing interest on many levels. From a fundamental point of view, it seeks to determine whether life can be sustained in the absence of radiation. From an astrobiological point of view, it is an interesting model for early life on Earth, as well as a representation of life as it could occur in other planetary bodies, e.g., Mars. Ŕ Tinto is an unusual extreme acidic environment due to its size, constant acidic pH, high ıo concentration of heavy metals and high level of microbial diversity. Ŕ Tinto rises in the core of ıo the Iberian Pyritic Belt (IPB), one of the biggest sulfidic ore deposits in the world. Today it is clear that the extreme characteristics of Ŕ Tinto are not due to acid mine drainage resulting ıo from mining activity. To explore the hypothesis that a continuous underground reactor of chemolithotrophic microorganisms thriving in the rich sulfidic minerals of the IPB is responsible for the extreme conditions found in the river, a drilling project has been developed to detect evidence of subsurface microbial activity and potential resources to support these microbial communities in situ from retrieved cores (MARTE project). Preliminary results clearly show that there is an active subsurface geomicrobiology in the Iberian Pyritic Belt associated to places were ground waters intersects the sulfidic ore body.

Drought-induced weakening of growth-temperature associations in high-elevation Iberian pines

NASA Astrophysics Data System (ADS)

Diego Galván, J.; Büntgen, Ulf; Ginzler, Christian; Grudd, Håkan; Gutiérrez, Emilia; Labuhn, Inga; Julio Camarero, J.

2015-01-01

The growth/climate relationship of theoretically temperature-controlled high-elevation forests has been demonstrated to weaken over recent decades. This is likely due to new tree growth limiting factors, such as an increasing drought risk for ecosystem functioning and productivity across the Mediterranean Basin. In addition, declining tree growth sensitivity to spring temperature may emerge in response to increasing drought stress. Here, we evaluate these ideas by assessing the growth/climate sensitivity of 1500 tree-ring width (TRW) and 102 maximum density (MXD) measurement series from 711 and 74 Pinus uncinata trees, respectively, sampled at 28 high-elevation forest sites across the Pyrenees and two relict populations of the Iberian System. Different dendroclimatological standardization and split period approaches were used to assess the high- to low-frequency behavior of 20th century tree growth in response to temperature means, precipitation totals and drought indices. Long-term variations in TRW track summer temperatures until about 1970 but diverge afterwards, whereas MXD captures the recent temperature increase in the low-frequency domain fairly well. On the other hand summer drought has increasingly driven TRW along the 20th century. Our results suggest fading temperature sensitivity of Iberian high-elevation P. uncinata forest growth, and reveal the importance of summer drought that is becoming the emergent limiting factor of tree ring width formation in many parts of the Mediterranean Basin.

A study of surface ozone variability over the Iberian Peninsula during the last fifty years

NASA Astrophysics Data System (ADS)

Fernández-Fernández, M. I.; Gallego, M. C.; García, J. A.; Acero, F. J.

2011-02-01

There is good evidence for an increase in the global surface level of ozone in the past century. In this work we present an analysis of 18 surface ozone series over the Iberian Peninsula, considering the target values of ozone for the protection of human health and for the protection of vegetation, as well as the information and alert thresholds established by the current European Directive on ambient air quality and cleaner air for Europe (Directive 2008/50/EC). The results show that the stations located on the Cantabrian coast exceeded neither the target value for the protection of human health nor the target value for the protection of vegetation. The information threshold was exceeded in most of the stations, while the alert threshold was only exceeded in one. The seasonal and daily evolution of ozone concentrations were as expected. A trend analysis of three surface ozone concentration indices (monthly median and 98th percentile, and monthly maximum of the daily maximum 8-h mean) was performed both for the whole period of each station and for the common period from 2001 to 2007 for all the months of the year. It was noted that generally the south of the Iberian Peninsula presented increasing trends for the three indices, especially in the last six months of the year, and the north decreasing trends. Finally, a correlation analysis was performed between the daily maximum 8-h mean and both daily mean temperature and daily mean solar radiation for the whole and the common periods. For all stations, there was a significant positive association at a 5% significance level between the daily maximum 8-h mean and the two meteorological variables of up to approximately 0.5. The spatial distribution of these association values from 2001 to 2007 showed a positive northwest to southeast gradient over the Iberian Peninsula.

The yield and nutritional value of meat from African ungulates, camelidae, rodents, ratites and reptiles.

PubMed

Hoffman, L C

2008-09-01

The current knowledge of the yield and nutritional (proximate and fatty acid) composition of meat derived from African ungulates, camelidae, rodents, ratites and reptiles is reviewed. Although most of the species discussed give low cholesterol levels consistent with their low meat lipid contents, the tegu lizard gives a very low level (18.2mg/100g tissue). The fatty acid profiles of the various species all have low saturated fatty acids and high polyunsaturated fatty acids resulting in favourable saturated to polyunsaturated fatty acid ratios. Although the springbok, camel, ostrich and crocodile are marketed and exported to sophisticated markets, the rodents are the species that show most promise in becoming large commercial commodities. Not only is their meat desirable and nutritional, but they are also highly adaptable to extensive and intensive production systems.

Africa's wild C4 plant foods and possible early hominid diets.

PubMed

Peters, Charles R; Vogel, John C

2005-03-01

A small minority of Africa's wild plant foods are C4. These are primarily the seeds of some of the C4 grasses, the rootstocks and stem/leaf bases of some of the C4 sedges (especially papyrus), and the leaves of some of the C4 herbaceous dicots (forbs). These wild food plants are commonly found in disturbed ground and wetlands (particularly the grasses and sedges). Multiple lines of evidence indicate that C4 grasses were present in Africa by at least the late Miocene. It is a reasonable hypothesis that the prehistory of the C4 sedges parallels that of the C4 grasses, but the C4 forbs may not have become common until the late Pleistocene. CAM plants may have a more ancient history, but offer few opportunities for an additional C4-like dietary signal. The environmental reconstructions available for the early South African hominid sites do not indicate the presence of large wetlands, and therefore probably the absence of a strong potential for a C4 plant food diet. However, carbon isotope analyses of tooth enamel from three species of early South African hominids have shown that there was a significant but not dominant contribution of C4 biomass in their diets. Since it appears unlikely that this C4 component could have come predominantly from C4 plant foods, a broad range of potential animal contributors is briefly considered, namely invertebrates, reptiles, birds, and small mammals. It is concluded that the similar average C4 dietary intake seen in the three South African hominid species could have been acquired by differing contributions from the various sources, without the need to assume scavenging or hunting of medium to large grazing ungulates. Effectively similar dominantly dryland paleo-environments may also be part of the explanation. Theoretically, elsewhere in southern and eastern Africa, large wetlands would have offered early hominids greater opportunities for a C4 plant diet.

Phylogeographic distribution of very virulent infectious bursal disease virus isolates in the Iberian Peninsula.

PubMed

Cortey, Martí; Bertran, Kateri; Toskano, Jennifer; Majó, Natàlia; Dolz, Roser

2012-01-01

Viral population dynamics of very virulent infectious bursal disease virus (vvIBDV) field strains isolated in the Iberian Peninsula since the first outbreak in the 1990s have been analysed. Low levels of genetic variability and a global purification selection pattern were reported in 480 base pairs of the hypervariable region of the VP2 gene, indicating a lack of a selection-driven immune escape in the evolutive pathway of the virus. The viral population structure of vvIBDV strains in the Iberian Peninsula showed a strong relationship between geography and phylogeny, with two main groups observed. A global comparison among vvIBDV strains also showed an association with sequences from the same country. The low variability, the strong purifying selection and the geographical pattern observed point to a picture where the virus evolves slowly, occupying the same geographical niche for a long time. The scenario depicted fits well with the biological features of the virus: being able to remain viable for long periods of time due to a strong environmental resistance, and as an immunosuppressive agent, capable per se of annihilating temporally the immune system of the host.

A shift in the spatial pattern of Iberian droughts during the 17th century

NASA Astrophysics Data System (ADS)

Domínguez-Castro, F.; García-Herrera, R.; Ribera, P.; Barriendos, M.

2010-06-01

In this paper, series of drought occurrence and drought extension in the Iberian Peninsula are constructed for the 1600-1750 period from seven rogation series. These rogation ceremony records come from Bilbao, Catalonia, Zamora, Zaragoza, Toledo, Murcia and Seville. They are distributed across the Peninsula and include the areas with the most characteristic Iberian climate types, influenced by the Atlantic and the Mediterranean conditions, described from modern data. A seasonal division of the series shows that spring is a critical season for rogation series in most of Iberia, being Bilbao the only site were the highest number of rogations is detected for a different season. The annual analysis of the series shows a dramatic difference between the period 1600-1652, when droughts are characterized by its local character; and the period 1653-1749, when they affect to broader regions or even to the whole Peninsula. The analysis of spring series confirms the existence of the two periods detected in the annual analysis. Finally, secondary documentary sources are used to further characterise the two most extended droughts in the period, 1664 and 1680, and to verify the extension of the areas affected by droughts recorded through rogation series.

Mid-late Holocene climatic changes in the Southwestern Iberian shelf

NASA Astrophysics Data System (ADS)

Gomes, S.; Naughton, F.; Rodrigues, T.; Drago, T.; Sanchez-Goñi, M.; Freitas, C.

2012-04-01

Vegetation (pollen analysis) and alkenone-derived Sea Surface Temperature (SST) reconstructions from a south western Iberian shelf core (POPEI VC2B) (36°53'12,99'' N, 8°03'57,98'' W) show orbital and suborbital climate variability at extremely high resolution for the last 6000 years in this region. In particular, the mid-late Holocene is marked by a long-term cooling revealed by the gradual decrease of arboreal pollen (AP) percentages and SST which parallels the general decreasing trend of the δ18-O isotope composition recorded in Greenland ice records and the decrease of the mid-latitudes summer insolation. The short-term vegetation changes, reflecting millennial scale climatic variability, are clearly identified in the POPEI VC2B over the last 6000 years. In particular, the basement of this record is marked by the presence of semi-desert plants (Chenopodiaceae, Artemisia and Ephedra) reflecting dry conditions. These particular dry conditions have been detected elsewhere in the southern Iberian Peninsula and in North African records. Following the particularly dry period, there is a decline of semi-desert plants and an increase of Ericaceae and Pinus associated with establishment of an incipient forest of Quercus deciduous type reflecting temperate and humid conditions. This period was followed by a decrease of arboreal pollen percentages, suggesting a relative climate cooling. Finally, the last 2500/2000 years, are marked by the presence of anthropogenic associations (including Cerealia-type, Plantago lanceolata-coronopus type, and Olea) and are characterized by several vegetation and climate oscillations associated with the Roman Period (RP), the Dark Ages (DA), the Medieval Climatic Anomaly (MCA), and the Little Ice Age (LIA).

Widespread Secondary Contact and New Glacial Refugia in the Halophilic Rotifer Brachionus plicatilis in the Iberian Peninsula

PubMed Central

Campillo, Sergi; Serra, Manuel; Carmona, María José; Gómez, Africa

2011-01-01

Small aquatic organisms harbour deep phylogeographic patterns and highly structured populations even at local scales. These patterns indicate restricted gene flow, despite these organisms' high dispersal abilities, and have been explained by a combination of (1) strong founder effects due to rapidly growing populations and very large population sizes, and (2) the development of diapausing egg banks and local adaptation, resulting in low effective gene flow, what is known as the Monopolization hypothesis. In this study, we build up on our understanding of the mitochondrial phylogeography of the halophilic rotifer Brachionus plicatilis in the Iberian Peninsula by both increasing the number of sampled ponds in areas where secondary contact is likely and doubling sample sizes. We analyzed partial mitochondrial sequences of 252 individuals. We found two deep mitochondrial DNA lineages differing in both their genetic diversity and the complexity of their phylogeographic structure. Our analyses suggest that several events of secondary contact between clades occurred after their expansion from glacial refugia. We found a pattern of isolation-by-distance, which we interpret as being the result of historical colonization events. We propose the existence of at least one glacial refugium in the SE of the Iberian Peninsula. Our findings challenge predictions of the Monopolization hypothesis, since coexistence (i.e., secondary contact) of divergent lineages in some ponds in the Iberian Peninsula is common. Our results indicate that phylogeographic structures in small organisms can be very complex and that gene flow between diverse lineages after population establishment can indeed occur. PMID:21698199

Widespread secondary contact and new glacial refugia in the halophilic rotifer Brachionus plicatilis in the Iberian Peninsula.

PubMed

Campillo, Sergi; Serra, Manuel; Carmona, María José; Gómez, Africa

2011-01-01

Small aquatic organisms harbour deep phylogeographic patterns and highly structured populations even at local scales. These patterns indicate restricted gene flow, despite these organisms' high dispersal abilities, and have been explained by a combination of (1) strong founder effects due to rapidly growing populations and very large population sizes, and (2) the development of diapausing egg banks and local adaptation, resulting in low effective gene flow, what is known as the Monopolization hypothesis. In this study, we build up on our understanding of the mitochondrial phylogeography of the halophilic rotifer Brachionus plicatilis in the Iberian Peninsula by both increasing the number of sampled ponds in areas where secondary contact is likely and doubling sample sizes. We analyzed partial mitochondrial sequences of 252 individuals. We found two deep mitochondrial DNA lineages differing in both their genetic diversity and the complexity of their phylogeographic structure. Our analyses suggest that several events of secondary contact between clades occurred after their expansion from glacial refugia. We found a pattern of isolation-by-distance, which we interpret as being the result of historical colonization events. We propose the existence of at least one glacial refugium in the SE of the Iberian Peninsula. Our findings challenge predictions of the Monopolization hypothesis, since coexistence (i.e., secondary contact) of divergent lineages in some ponds in the Iberian Peninsula is common. Our results indicate that phylogeographic structures in small organisms can be very complex and that gene flow between diverse lineages after population establishment can indeed occur.

77 FR 26781 - Charles M. Russell National Wildlife Refuge and UL Bend National Wildlife Refuge, MT

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-07

... wild ungulates and responsible farming practices and tree planting. Wildlife-dependent public use would... actions follow: Management practices that mimic and restore natural processes, as well as maintain a... viability of sentinel plants (those plants that decline first when management practices are injurious). To...

Effect of different carotenoid-containing diets on the vitamin A levels and colour parameters in Iberian pigs' tissues: utility as biomarkers of traceability.

PubMed

Álvarez, R; Vicario, I M; Meléndez-Martínez, A J; Alcalde, M J

2014-10-01

Retinol and fat colour parameters in Iberian pigs fed on different carotenoid-containing diets were assessed. Thirty animals in two groups were considered: Iberian breed pigs fed on acorns and grass (Montanera) and on concentrate (Cebo). Carotenoids and retinoids were analysed in the diets and in plasma, liver and perirenal fat of the animals by HPLC and HPLC-MS. Retinol levels in plasma and fat were similar in Montanera and Cebo animals. The utility of retonids and colour parameters as traceability index was also explored. Retinoids in liver classified correctly 93% of the animals according to their diet L* and hab. CIELAB parameters of the perirenal fat discriminated correctly 78.6% of the animals according to their diet. L* values for the Montanera animals were significantly different (P<0.01) from those fed on concentrate. It can be claimed that the liver retinol profile and fat colour parameters can be useful for feeding traceability purposes in Iberian pigs breed in Montanera and Cebo. Copyright © 2014 Elsevier Ltd. All rights reserved.

400 Years of summer hydroclimate from stable isotopes in Iberian trees

NASA Astrophysics Data System (ADS)

Andreu-Hayles, Laia; Ummenhofer, Caroline C.; Barriendos, Mariano; Schleser, Gerhard H.; Helle, Gerhard; Leuenberger, Markus; Gutiérrez, Emilia; Cook, Edward R.

2017-07-01

Tree rings are natural archives that annually record distinct types of past climate variability depending on the parameters measured. Here, we use ring-width and stable isotopes in cellulose of trees from the northwestern Iberian Peninsula (IP) to understand regional summer hydroclimate over the last 400 years and the associated atmospheric patterns. Correlations between tree rings and climate data demonstrate that isotope signatures in the targeted Iberian pine forests are very sensitive to water availability during the summer period, and are mainly controlled by stomatal conductance. Non-linear methods based on extreme events analysis allow for capturing distinct seasonal climatic variability recorded by tree-ring parameters and asymmetric signals of the associated atmospheric features. Moreover, years with extreme high (low) values in the tree-ring records were characterised by coherent large-scale atmospheric circulation patterns with reduced (enhanced) moisture transport onto the northwestern IP. These analyses of extremes revealed that high/low proxy values do not necessarily correspond to mirror images in the atmospheric anomaly patterns, suggesting different drivers of these patterns and the corresponding signature recorded in the proxies. Regional hydroclimate features across the broader IP and western Europe during extreme wet/dry summers detected by the northwestern IP trees compare favourably to independent multicentury sea level pressure and drought reconstructions for Europe. Historical records also validate our findings that attribute non-linear moisture signals recorded by extreme tree-ring values to distinct large-scale atmospheric patterns and allow for 400-year reconstructions of the frequency of occurrence of extreme conditions in late spring and summer hydroclimate.

Conservation genetics of the endangered Iberian steppe plant Ferula loscosii (Apiaceae).

PubMed

Pérez-Collazos, E; Catalán, P

2008-07-01

Ferula loscosii (Lange) Willk (Apiaceae) is a threatened endemic species native to the Iberian Peninsula. The plant has a narrow and disjunct distribution in three regions, NE, C and SE Spain. Genetic variability within and among 11 populations from its natural distribution was assessed using allozymes. Intermediate levels of genetic diversity were detected in F. loscosii (P(99%) = 36.83; H(E) = 0.125; H(T) = 0.152). However, the highest genetic diversity (58%) corresponded to the threatened populations from SE and C Spain (H(T) = 0.169) rather than the more abundant and larger populations from NE Spain (Ebro valley) (H(T) = 0.122). Low to moderate levels of genetic structure were found among regional ranges (G(ST) = 0.134), and several statistical spatial correlation analyses corroborated substantial genetic differentiation among the three main regional ranges. However, no significant genetic differentiation was found among the NE Spain populations, except for a northernmost population that is geographically isolated. Outcrossing mating and other biological traits of the species could account for the maintenance of the present values of genetic diversity within populations. The existence of an ancestral late Tertiary wider distribution of the species in SE and C Spain, followed by the maintenance of different Quaternary refugia in these warmer areas, together with a more recent and rapid post-glacial expansion towards NE Spain, are arguments that could explain the low genetic variability and structure found in the Ebro valley and the higher levels of diversity in the southern Iberian populations.

Abundance and fragmentation patterns of the ecosystem engineer Lithophyllum byssoides (Lamarck) Foslie along the Iberian Peninsula Atlantic coast. Conservation and management implications

NASA Astrophysics Data System (ADS)

Veiga, Puri; Rubal, Marcos; Cacabelos, Eva; Moreira, Juan; Sousa-Pinto, Isabel

2013-10-01

The crustose calcareous red macroalgae Lithophyllum byssoides (Lamarck) Foslie is a common ecosystem engineer along the Atlantic and Mediterranean coast of the Iberian Peninsula. This species is threatened by several anthropogenic impacts acting at different spatial scales, such as pollution or global warming. The aim of this study is to identify scales of spatial variation in the abundance and fragmentation patterns of L. byssoides along the Atlantic coast of the Iberian Peninsula. For this aim we used a hierarchical sampling design considering four spatial scales (from metres to 100s of kilometres). Results of the present study indicated no significant variability among regions investigated whereas significant variability was found at the scales of shore and site in spatial patterns of abundance and fragmentation of L. byssoides. Variance components were higher at the spatial scale of shore for abundance and fragmentation of L. byssoides with the only exception of percentage cover and thus, processes acting at the scale of 10s of kilometres seem to be more relevant in shaping the spatial variability both in abundance and fragmentation of L. byssoides. These results provided quantitative estimates of abundance and fragmentation of L. byssoides at the Atlantic coast of the Iberian Peninsula establishing the observational basis for future assessment, monitoring and experimental investigations to identify the processes and anthropogenic impacts affecting L. byssoides populations. Finally we have also identified percentage cover and patch density as the best variables for long-term monitoring programs aimed to detect future anthropogenic impacts on L. byssoides. Therefore, our results have important implications for conservation and management of this valuable ecosystem engineer along the Atlantic coast of the Iberian Peninsula.

CHALLENGES OF PASSIVE TREATMENT OF METAL MINE DRAINAGE IN THE IBERIAN PYRITE BELT (SOUTHERN SPAIN): PRELIMINARY STUDIES

EPA Science Inventory

AMD in the Iberian Pyrite Belt is a problem of global scale. Successful implementation of passive treatment systems could remediate at least part of this problem at reasonable costs. However, initial trials with ALD and RAPS based on gravel size limestone failed due to rapid loss...

Climate variability during the Holocene inferred from northeastern Iberian speleothems

NASA Astrophysics Data System (ADS)

Moreno, A.; Bartolomé, M.; Sancho, C.; Belmonte, Á.; Stoll, H.; Cacho, I.; Edwards, R. L.; Hellstrom, J.

2012-04-01

Although the general climate trends during the Holocene in the Iberian Peninsula have been well described after the study of marine and lacustrine records, many questions regarding the timing of some of the events together with the characterization of the higher-frequency climate variability are still poorly understood. New speleothem records from several caves in northeastern Iberia provide data to explore Holocene climate changes. The selected caves are located in a latitudinal transect from the Pyrenees to the Iberian Range and placed at different altitude. Two of them, 5 de Agosto and Pot au Feu, belong to the same karstic complex in Cotiella massif (Central Pyrenees, 1600 m asl). Seso Cave, also in the Central Pyrenees but at 781 m of altitude, and Molinos cave, a cavity very rich in speleothems located at 1040 m in the Iberian Range, complete the transect. Although in all the caves precipitation coming from Atlantic fronts dominates over the year, a significant Mediterranean influence, specially in summer months, is identified after rainfall monitoring. Speleothem formation during the Holocene occurred at a very low pace in 5 de Agosto cave (80yrs/mm) and increased dramatically at low-altitude caves and during particular periods proved to be wetter (eg. Early Holocene in Molinos cave, less than 10yr/mm). In Seso and Pot au Feu caves, up to seven studied speleothems only grew during short climatic events such as the Iron Cold Period (3000-2500 cal yr BP) or the Little Ice Age (1300-1850 yr AD) that, although cold, were particularly humid periods in northeastern Spain. First stable isotope results highlight the importance of comparing speleothems with similar growing rates and from the same cave to extract climate information and discard other influences. From the integration of four stalagmites from Molinos cave covering since the Holocene onset to 2000 cal yrs BP, the Early Holocene (11.7-8.5 ka BP) with d13C values between -11 and - 9‰ appears as the

Iberian fish records in the vertebrate collection of the Museum of Zoology of the University of Navarra

PubMed Central

Rodeles, Amaia A.; Galicia, David; Miranda, Rafael

2016-01-01

The study of freshwater fish species biodiversity and community composition is essential for understanding river systems, the effects of human activities on rivers, and the changes these animals face. Conducting this type of research requires quantitative information on fish abundance, ideally with long-term series and fish body measurements. This Data Descriptor presents a collection of 12 datasets containing a total of 146,342 occurrence records of 41 freshwater fish species sampled in 233 localities of various Iberian river basins. The datasets also contain 148,749 measurement records (length and weight) for these fish. Data were collected in different sampling campaigns (from 1992 to 2015). Eleven datasets represent large projects conducted over several years, and another combines small sampling campaigns. The Iberian Peninsula contains high fish biodiversity, with numerous endemic species threatened by various menaces, such as water extraction and invasive species. These data may support the development of large biodiversity conservation studies. PMID:27727236

Iberian fish records in the vertebrate collection of the Museum of Zoology of the University of Navarra.

PubMed

Rodeles, Amaia A; Galicia, David; Miranda, Rafael

2016-10-11

The study of freshwater fish species biodiversity and community composition is essential for understanding river systems, the effects of human activities on rivers, and the changes these animals face. Conducting this type of research requires quantitative information on fish abundance, ideally with long-term series and fish body measurements. This Data Descriptor presents a collection of 12 datasets containing a total of 146,342 occurrence records of 41 freshwater fish species sampled in 233 localities of various Iberian river basins. The datasets also contain 148,749 measurement records (length and weight) for these fish. Data were collected in different sampling campaigns (from 1992 to 2015). Eleven datasets represent large projects conducted over several years, and another combines small sampling campaigns. The Iberian Peninsula contains high fish biodiversity, with numerous endemic species threatened by various menaces, such as water extraction and invasive species. These data may support the development of large biodiversity conservation studies.

Zilsel's Thesis, Maritime Culture, and Iberian Science in Early Modern Europe.

PubMed

Leitão, Henrique; Sánchez, Antonio

2017-01-01

Zilsel's thesis on the artisanal origins of modern science remains one of the most original proposals about the emergence of scientific modernity. We propose to inspect the scientific developments in Iberia in the early modern period using Zilsel's ideas as a guideline. Our purpose is to show that his ideas illuminate the situation in Iberia but also that the Iberian case is a remarkable illustration of Zilsel's thesis. Furthermore, we argue that Zilsel's thesis is essentially a sociological explanation that cannot be applied to isolated cases; its use implies global events that involve extended societies over large periods of time.

Are cattle surrogate wildlife? Savannah plant community composition explained by total herbivory, not herbivore identity

USDA-ARS?s Scientific Manuscript database

The replacement of wild ungulate herbivores by domestic livestock in African savannas is composed of two interrelated phenomena: 1) loss or reduction in numbers of individual wildlife species or guilds, and 2) addition of livestock to the system. Each has important implications for plant community d...

Are cattle surrogate wildlife? Savanna plant community composition explained by total herbivory, not herbivore identity

USDA-ARS?s Scientific Manuscript database

The replacement of wild ungulate herbivores by domestic livestock in African savannas is composed of two interrelated phenomena: 1) loss or reduction in numbers of individual wildlife species or guilds, and 2) addition of livestock to the system. Yet very few studies have addressed the individual, c...

Vocal anatomy, tongue protrusion behaviour and the acoustics of rutting roars in free-ranging Iberian red deer stags (Cervus elaphus hispanicus).

PubMed

Frey, Roland; Volodin, Ilya; Volodina, Elena; Carranza, Juan; Torres-Porras, Jerónimo

2012-03-01

Roaring in rutting Iberian red deer stags Cervus elaphus hispanicus is unusual compared to other subspecies of red deer, which radiated from the Iberian refugium after the last glacial maximum. In all red deer stags, the larynx occupies a permanent low mid-neck resting position and is momentarily retracted almost down to the rostral end of the sternum during the production of rutting calls. Simultaneous with the retraction of the larynx, male Iberian red deer pronouncedly protrude the tongue during most of their rutting roars. This poses a mechanical challenge for the vocal tract (vt) and for the hyoid apparatus, as tongue and larynx are strongly pulled in opposite directions. This study (i) examines the vocal anatomy and the acoustics of the rutting roars in free-ranging male C. e. hispanicus; (ii) establishes a potential mechanism of simultaneous tongue protrusion and larynx retraction by applying a two-dimensional model based on graphic reconstructions in single video frames of unrestrained animals; and (iii) advances a hypothesis of evaporative cooling by tongue protrusion in the males of a subspecies of red deer constrained to perform all of the exhausting rutting activities, including acoustic display, in a hot and arid season. © 2012 The Authors. Journal of Anatomy © 2012 Anatomical Society.

Vocal anatomy, tongue protrusion behaviour and the acoustics of rutting roars in free-ranging Iberian red deer stags (Cervus elaphus hispanicus)

PubMed Central

Frey, Roland; Volodin, Ilya; Volodina, Elena; Carranza, Juan; Torres-Porras, Jerónimo

2012-01-01

Roaring in rutting Iberian red deer stags Cervus elaphus hispanicus is unusual compared to other subspecies of red deer, which radiated from the Iberian refugium after the last glacial maximum. In all red deer stags, the larynx occupies a permanent low mid-neck resting position and is momentarily retracted almost down to the rostral end of the sternum during the production of rutting calls. Simultaneous with the retraction of the larynx, male Iberian red deer pronouncedly protrude the tongue during most of their rutting roars. This poses a mechanical challenge for the vocal tract (vt) and for the hyoid apparatus, as tongue and larynx are strongly pulled in opposite directions. This study (i) examines the vocal anatomy and the acoustics of the rutting roars in free-ranging male C. e. hispanicus; (ii) establishes a potential mechanism of simultaneous tongue protrusion and larynx retraction by applying a two-dimensional model based on graphic reconstructions in single video frames of unrestrained animals; and (iii) advances a hypothesis of evaporative cooling by tongue protrusion in the males of a subspecies of red deer constrained to perform all of the exhausting rutting activities, including acoustic display, in a hot and arid season. PMID:22257361

Increases in residential and energy development are associated with reductions in recruitment for a large ungulate.

PubMed

Johnson, Heather E; Sushinsky, Jessica R; Holland, Andrew; Bergman, Eric J; Balzer, Trevor; Garner, James; Reed, Sarah E

2017-02-01

Land-use change due to anthropogenic development is pervasive across the globe and commonly associated with negative consequences for biodiversity. While land-use change has been linked to shifts in the behavior and habitat-use patterns of wildlife species, little is known about its influence on animal population dynamics, despite the relevance of such information for conservation. We conducted the first broad-scale investigation correlating temporal patterns of land-use change with the demographic rates of mule deer, an iconic species in the western United States experiencing wide-scale population declines. We employed a unique combination of long-term (1980-2010) data on residential and energy development across western Colorado, in conjunction with congruent data on deer recruitment, to quantify annual changes in land-use and correlate those changes with annual indices of demographic performance. We also examined annual variation in weather conditions, which are well recognized to influence ungulate productivity, and provided a basis for comparing the relative strength of different covariates in their association with deer recruitment. Using linear mixed models, we found that increasing residential and energy development within deer habitat were correlated with declining recruitment rates, particularly within seasonal winter ranges. Residential housing had two times the magnitude of effect of any other factor we investigated, and energy development had an effect size similar to key weather variables known to be important to ungulate dynamics. This analysis is the first to correlate a demographic response in mule deer with residential and energy development at large spatial extents relevant to population performance, suggesting that further increases in these development types on deer ranges are not compatible with the goal of maintaining highly productive deer populations. Our results underscore the significance of expanding residential development on mule deer

An Iberian climatology of solar radiation obtained from WRF regional climate simulations for 1950-2010 period

NASA Astrophysics Data System (ADS)

Perdigão, João; Salgado, Rui; Magarreiro, Clarisse; Soares, Pedro M. M.; Costa, Maria João; Dasari, Hari Prasad

2017-12-01

The mesoscale Weather Research and Forecasting (WRF) Model is used over the Iberian Peninsula to generate 60 years (1950-2010) of climate data, at 5 km resolution, in order to evaluate and characterize the incident shortwave downward radiation at the surface (SW ↓), in present climate. The simulated values of SW ↓ in the period 2000-2009 were compared with data measured in Spanish and Portuguese meteorological stations before and a statistical BIAS correction was applied using data from Clouds and the Earth's Radiant Energy System (CERES), on board four different satellites. The spatial and temporal comparison between WRF results and observations show a good agreement for the analyzed period, although the model overestimates observations. This overestimation has a mean normalized bias of about 7% after BIAS correction (or 17% for original WRF output). Additionally, the present simulation was confronted against another previously validated WRF simulation performed with different resolution and set of parametrizations, showing comparable results. WRF adequately reproduces the observational features of SW ↓ with correlation coefficients above 0.8 in annual and seasonal basis. 60 years of simulated SW ↓ over the Iberian Peninsula were produced, which showed annual mean values that range from 130 W/m2, in the northern regions, to a maximum of around 230 W/m2 in the southeast of the Iberian Peninsula (IP). SW ↓ over IP shows a positive gradient from north to south and from west to east, with local effects influenced by topography and distance to the coast. The analysis of the simulated cloud fraction indicates that clear sky days are found in > 30% of the period at the southern area of IP, particularly in the Algarve (Portugal) and Andalusia (Spain), and this value increases significantly in the summer season for values above 80%.

Assessing methods for developing crop forecasting in the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Ines, A. V. M.; Capa Morocho, M. I.; Baethgen, W.; Rodriguez-Fonseca, B.; Han, E.; Ruiz Ramos, M.

2015-12-01

Seasonal climate prediction may allow predicting crop yield to reduce the vulnerability of agricultural production to climate variability and its extremes. It has been already demonstrated that seasonal climate predictions at European (or Iberian) scale from ensembles of global coupled climate models have some skill (Palmer et al., 2004). The limited predictability that exhibits the atmosphere in mid-latitudes, and therefore de Iberian Peninsula (PI), can be managed by a probabilistic approach based in terciles. This study presents an application for the IP of two methods for linking tercile-based seasonal climate forecasts with crop models to improve crop predictability. Two methods were evaluated and applied for disaggregating seasonal rainfall forecasts into daily weather realizations: 1) a stochastic weather generator and 2) a forecast tercile resampler. Both methods were evaluated in a case study where the impacts of two seasonal rainfall forecasts (wet and dry forecast for 1998 and 2015 respectively) on rainfed wheat yield and irrigation requirements of maize in IP were analyzed. Simulated wheat yield and irrigation requirements of maize were computed with the crop models CERES-wheat and CERES-maize which are included in Decision Support System for Agrotechnology Transfer (DSSAT v.4.5, Hoogenboom et al., 2010). Simulations were run at several locations in Spain where the crop model was calibrated and validated with independent field data. These methodologies would allow quantifying the benefits and risks of a seasonal climate forecast to potential users as farmers, agroindustry and insurance companies in the IP. Therefore, we would be able to establish early warning systems and to design crop management adaptation strategies that take advantage of favorable conditions or reduce the effect of adverse ones. ReferencesPalmer, T. et al., 2004. Development of a European multimodel ensemble system for seasonal-to-interannual prediction (DEMETER). Bulletin of the

High resolution reconstruction of monthly precipitation of Iberian Peninsula using circulation weather types

NASA Astrophysics Data System (ADS)

Cortesi, N.; Trigo, R.; Gonzalez-Hidalgo, J. C.; Ramos, A. M.

2012-06-01

Precipitation over the Iberian Peninsula (IP) is highly variable and shows large spatial contrasts between wet mountainous regions, to the north, and dry regions in the inland plains and southern areas. In this work, a high-density monthly precipitation dataset for the IP was coupled with a set of 26 atmospheric circulation weather types (Trigo and DaCamara, 2000) to reconstruct Iberian monthly precipitation from October to May with a very high resolution of 3030 precipitation series (overall mean density one station each 200 km2). A stepwise linear regression model with forward selection was used to develop monthly reconstructed precipitation series calibrated and validated over 1948-2003 period. Validation was conducted by means of a leave-one-out cross-validation over the calibration period. The results show a good model performance for selected months, with a mean coefficient of variation (CV) around 0.6 for validation period, being particularly robust over the western and central sectors of IP, while the predicted values in the Mediterranean and northern coastal areas are less acute. We show for three long stations (Lisbon, Madrid and Valencia) the comparison between model and original data as an example to how these models can be used in order to obtain monthly precipitation fields since the 1850s over most of IP for this very high density network.

Direct and maternal additive effects are not the main determinants of Iberian piglet perinatal mortality.

PubMed

Muñoz, M; Rodríguez, M C; García-Cortes, L A; González, A; García-Casco, J M; Silió, L

2017-12-01

Data of 127,800 Iberian piglets were used to study genetic parameters of mortality at birth at the piglet level. These records proceed from three data sets: 4,987 litter of 2,156 sows of a dam line, 2,768 litter of 817 sows of a complete diallel cross between four Iberian strains and 7,153 litter of 2,113 sows of the Torbiscal composite line. Perinatal mortality was considered as a binary trait, and Bayesian threshold animal models were fitted to separately analyse the three data sets. The posterior means of direct heritability were 0.010, 0.004 and 0.003, and those of maternal heritability were 0.034, 0.011 and 0.014 for dam line, diallel cross and Torbiscal line, respectively. Important effects of litter size and parity order were inferred in the three data sets, of within-breed cross-breeding parameters in the diallel cross and of sex and sow handling in the Torbiscal line Therefore, the inclusion of perinatal mortality in the objective of selection is questionable in this breed and strategies for reducing piglet mortality successful in other breeds should be considered. © 2017 Blackwell Verlag GmbH.

Reproductive traits in captive and free-ranging males of the critically endangered Iberian lynx (Lynx pardinus).

PubMed

Gañán, Natalia; Sestelo, Adrián; Garde, J Julián; Martínez, Fernando; Vargas, Astrid; Sánchez, Iñigo; Pérez-Aspa, María José; López-Bao, José Vicente; Palomares, Francisco; Gomendio, Montserrat; Roldan, Eduardo R S

2010-01-01

The Iberian lynx (Lynx pardinus) is the most endangered felid in the world. Adequate genetic management of in situ and ex situ populations, and linkage between both, require knowledge on male reproductive biology and factors influencing it. We examined the influence of age, free-ranging versus captive conditions and seasonality on phenotypic, endocrine and semen traits, and links between reproductive traits and male fertility. Males had relatively small testes, produced low sperm numbers, a low proportion of normal sperm, and a high proportion of motile sperm. Young (2-year-old) males had lower testosterone levels, fewer sperm, and a lower proportion of motile and normal sperm than > or =4-year-old males. No major differences were found in semen traits before and after the mating season or between free-ranging and captive males, although the latter had better sperm motility. Males with larger relative testes weight and more sperm copulated more frequently, whereas males that produced more sperm with higher motility produced more cubs per female. In conclusion, small relative testes size and low sperm quality could indicate either low levels of sperm competition or high levels of inbreeding. Young males are probably subfertile; there is a slight trend for males in the captive breeding programme to have better semen quality than wild males, and males with higher sperm production are sexually more active and more fertile. These findings have major implications for decisions regarding which males should breed, provide samples for the genetic resource bank, or participate in programmes involving the use of assisted reproductive techniques.

A shift in the spatial pattern of Iberian droughts during the 17th century

NASA Astrophysics Data System (ADS)

Domínguez-Castro, F.; García-Herrera, R.; Ribera, P.; Barriendos, M.

2010-09-01

In this paper, series of drought occurrence and drought extension in the Iberian Peninsula are constructed for the 1600-1750 period from seven rogation series. These rogation ceremony records come from Bilbao, Catalonia, Zamora, Zaragoza, Toledo, Murcia and Seville. They are distributed across the Peninsula and include the areas with the most characteristic Iberian climate types, influenced by the Atlantic and the Mediterranean conditions, described from modern data. A seasonal division of the series shows that spring is a critical season for rogation series in most of Iberia, being Bilbao the only site were the highest number of rogations is detected for a different season. The annual analysis of the series shows a dramatic difference between the first half of the 17th century when droughts are characterized by its local character; and the rest of the period, when they affect to broader regions or even to the whole Peninsula. The analysis of spring series confirms the existence of the two periods detected in the annual analysis. Finally, secondary documentary sources are used to further characterise the two most extended droughts in the period, 1664 and 1680, and to verify the extension of the areas affected by droughts recorded through rogation series.

Tarangire revisited: Consequences of declining connectivity in a tropical ungulate population

USGS Publications Warehouse

Morrison, Thomas A.; Link, William; Newmark, William D.; Foley, Charles A.H.; Bolger, Douglas T.

2016-01-01

The hyper-abundance of migratory wildlife in many ecosystems depends on maintaining access to seasonally available resources. In Eastern and Southern Africa, land-use change and a loss of connectivity have coincided with widespread declines in the abundance and geographic range of ungulate populations. Using photographic capture-mark-recapture, we examine the historical pattern of loss of connectivity and its impact on population trends in a partially migratory wildebeest population in northern Tanzania. To estimate abundance, we use a novel modeling approach that overcomes bias associated with photo misidentifications. Our data indicate (1) diminished connectivity within and between seasonal areas as a result of human activities, (2) a reduction in the overall population size compared to historical numbers, with high variability over time, (3) the continued use of highly constrained movement corridors between the three main seasonal ranges, (4) higher recruitment in the non-migratory subpopulation (Lake Manyara National Park) than in other areas of the ecosystem, and (5) an increase in the relative abundance of resident to migrant wildebeest. Recent conservation efforts to protect seasonal habitat and to enforce anti-poaching policies outside protected areas have likely helped stabilize the population, at least temporarily, but we caution that several key vulnerabilities remain.

Conservation Genetics of Threatened Hippocampus guttulatus in Vulnerable Habitats in NW Spain: Temporal and Spatial Stability of Wild Populations with Flexible Polygamous Mating System in Captivity

PubMed Central

López, Almudena; Vera, Manuel; Planas, Miquel; Bouza, Carmen

2015-01-01

This study was focused on conservation genetics of threatened Hippocampus guttulatus on the Atlantic coast of NW Iberian Peninsula. Information about spatial structure and temporal stability of wild populations was obtained based on microsatellite markers, and used for monitoring a captive breeding program firstly initiated in this zone at the facilities of the Institute of Marine Research (Vigo, Spain). No significant major genetic structure was observed regarding the biogeographical barrier of Cape Finisterre. However, two management units under continuous gene flow are proposed based on the allelic differentiation between South-Atlantic and Cantabrian subpopulations, with small to moderate contemporary effective size based on single-sample methods. Temporal stability was observed in South-Atlantic population samples of H. guttulatus for the six-year period studied, suggesting large enough effective population size to buffer the effects of genetic drift within the time frame of three generations. Genetic analysis of wild breeders and offspring in captivity since 2009 allowed us to monitor the breeding program founded in 2006 in NW Spain for this species. Similar genetic diversity in the renewed and founder broodstock, regarding the wild population of origin, supports suitable renewal and rearing processes to maintain genetic variation in captivity. Genetic parentage proved single-brood monogamy in the wild and in captivity, but flexible short- and long-term mating system under captive conditions, from strict monogamy to polygamy within and/or among breeding seasons. Family analysis showed high reproductive success in captivity under genetic management assisted by molecular relatedness estimates to avoid inbreeding. This study provides genetic information about H. guttulatus in the wild and captivity within an uncovered geographical range for this data deficient species, to be taken into account for management and conservation purposes. PMID:25646777

The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: expansion and retreat with hybridization in the Iberian Peninsula.

PubMed

Melo-Ferreira, J; Boursot, P; Randi, E; Kryukov, A; Suchentrunk, F; Ferrand, N; Alves, P C

2007-02-01

The climatic fluctuations during glaciations have affected differently arctic and temperate species. In the northern hemisphere, cooling periods induced the expansion of many arctic species to the south, while temperate species were forced to retract in southern refugia. Consequently, in some areas the alternation of these species set the conditions for competition and eventually hybridization. Hares in the Iberian Peninsula appear to illustrate this phenomenon. Populations of Iberian hare (Lepus granatensis), brown hare (Lepus europaeus) and broom hare (Lepus castroviejoi) in Northern Iberia harbour mitochondrial haplotypes from the mountain hare (Lepus timidus), a mainly boreal and arctic species presently absent from the peninsula. To understand the history of this past introgression we analysed sequence variation and geographical distribution of mitochondrial control region and cytochrome b haplotypes of L. timidus origin found in 378 specimens of these four species. Among 124 L. timidus from the Northern Palaearctic and the Alps we found substantial nucleotide diversity (2.3%) but little differentiation between populations. Based on the mismatch distribution of the L. timidus sequences, this could result from an expansion at a time of temperature decrease favourable to this arctic species. The nucleotide diversity of L. timidus mtDNA found in Iberian L. granatensis, L. europaeus and L. castroviejoi (183, 70 and 1 specimens, respectively) was of the same order as that in L. timidus over its range (1.9%), suggesting repeated introgression of multiple lineages. The structure of the coalescent of L. granatensis sequences indicates that hybridization with L. timidus was followed by expansion of the introgressed haplotypes, as expected during a replacement with competition, and occurred when temperatures started to rise, favouring the temperate species. Whether a similar scenario explains the introgression into Iberian L. europaeus remains unclear but it is possible

Breeding system and interaccessional hybridization of Purshia tridentata plants grown in a common garden

Treesearch

Rosemary L. Pendleton; E. Durant McArthur; Stewart C. Sanderson

2012-01-01

Purshia spp. (Rosaceae) comprise a widespread western North American species complex that is important as landscape dominants, wildlife habitat, browse for wild and domestic ungulates, and seed reserves for small mammals. This study examined aspects of the phenology, compatibility, pollination biology, and progeny fruit characteristics of multiple accessions of...

No evidence of inbreeding avoidance in a polygynous ungulate: the reindeer (Rangifer tarandus).

PubMed

Holand, Oystein; Askim, Kjartan R; Røed, Knut H; Weladji, Robert B; Gjøstein, Hallvard; Nieminen, Mauri

2007-02-22

In polygynous species, mate choice is an integrated part of sexual selection. However, whether mate choice occurs independently of the genetic relatedness among mating pairs has received little attention, although inbreeding may have fitness consequences. We studied whether genetic relatedness influenced females' choice of partner in a highly polygynous ungulate--the reindeer (Rangifer tarandus)--in an experimental herd during two consecutive rutting seasons; the herd consisting of 75 females in 1999 and 74 females in 2000 was exposed to three 4.5-year-old adults and three 1.5-year-old young males, respectively. The females' distribution during peak rut was not influenced by their genetic relatedness with the dominant males of the mating groups. Further, genetic relatedness did not influence the actual choice of mating partner. We conclude that inbreeding avoidance through mating group choice as well as choice of mating partner, two interconnected processes of female mate choice operating at two different scales in space and time, in such a highly female-biased reindeer populations with low level of inbreeding may not occur.

EUNIS habitat's thresholds for the Western coast of the Iberian Peninsula - A Portuguese case study

NASA Astrophysics Data System (ADS)

Monteiro, Pedro; Bentes, Luis; Oliveira, Frederico; Afonso, Carlos M. L.; Rangel, Mafalda O.; Gonçalves, Jorge M. S.

2015-06-01

The European Nature Information System (EUNIS) has been implemented for the establishment of a marine European habitats inventory. Its hierarchical classification is defined and relies on environmental variables which primarily constrain biological communities (e.g. substrate types, sea energy level, depth and light penetration). The EUNIS habitat classification scheme relies on thresholds (e.g. fraction of light and energy) which are based on expert judgment or on the empirical analysis of the above environmental data. The present paper proposes to establish and validate an appropriate threshold for energy classes (high, moderate and low) and for subtidal biological zonation (infralittoral and circalittoral) suitable for EUNIS habitat classification of the Western Iberian coast. Kinetic wave-induced energy and the fraction of photosynthetically available light exerted on the marine bottom were respectively assigned to the presence of kelp (Saccorhiza polyschides, Laminaria hyperborea and Laminaria ochroleuca) and seaweed species in general. Both data were statistically described, ordered from the largest to the smallest and percentile analyses were independently performed. The threshold between infralittoral and circalittoral was based on the first quartile while the 'moderate energy' class was established between the 12.5 and 87.5 percentiles. To avoid data dependence on sampling locations and assess the confidence interval a bootstrap technique was applied. According to this analysis, more than 75% of seaweeds are present at locations where more than 3.65% of the surface light reaches the sea bottom. The range of energy levels estimated using S. polyschides data, indicate that on the Iberian West coast the 'moderate energy' areas are between 0.00303 and 0.04385 N/m2 of wave-induced energy. The lack of agreement between different studies in different regions of Europe suggests the need for more standardization in the future. However, the obtained thresholds in

400 years of summer hydroclimate from stable isotopes in Iberian trees

NASA Astrophysics Data System (ADS)

Andreu-Hayles, Laia; Ummenhofer, Caroline C.; Barriendos, Mariano; Schleser, Gerhard H.; Helle, Gerhard; Leuenberger, Markus; Gutierrez, Emilia; Cook, Edward R.

2017-04-01

Tree rings are natural archives that annually record distinct types of past climate variability depending on the parameters measured. Here, we use ring-width and stable isotopes in cellulose of trees from the northwestern Iberian Peninsula (IP) to understand regional summer hydroclimate over the last 400 years and the associated atmospheric patterns. Correlations between tree rings and climate data demonstrate that isotope signatures in the targeted Iberian pine forests are very sensitive to water availability during the summer period, and are mainly controlled by stomatal conductance. Non-linear methods based on extreme events analysis allow for capturing distinct seasonal climatic variability recorded by tree-ring parameters and asymmetric signals of the associated atmospheric features. Moreover, years with extreme high (low) values in the tree-ring records were characterised by coherent large-scale atmospheric circulation patterns with reduced (enhanced) moisture transport onto the northwestern IP. These analyses of extremes revealed that high/low proxy values do not necessarily correspond to mirror images in the atmospheric anomaly patterns, suggesting different drivers of these patterns and the corresponding signature recorded in the proxies. Regional hydroclimate features across the broader IP and western Europe during extreme wet/dry summers detected by the northwestern IP trees compare favourably to an independent multicentury sea level pressure and drought reconstruction for Europe. Historical records also validate our findings that attribute non-linear moisture signals recorded by extreme tree-ring values to distinct large-scale atmospheric patterns and allow for 400-yr reconstructions of the frequency of occurrence of extreme conditions in summer hydroclimate. We will discuss how the results for Lillo compare with other records.

Airborne pollen trends in the Iberian Peninsula.

PubMed

Galán, C; Alcázar, P; Oteros, J; García-Mozo, H; Aira, M J; Belmonte, J; Diaz de la Guardia, C; Fernández-González, D; Gutierrez-Bustillo, M; Moreno-Grau, S; Pérez-Badía, R; Rodríguez-Rajo, J; Ruiz-Valenzuela, L; Tormo, R; Trigo, M M; Domínguez-Vilches, E

2016-04-15

Airborne pollen monitoring is an effective tool for studying the reproductive phenology of anemophilous plants, an important bioindicator of plant behavior. Recent decades have revealed a trend towards rising airborne pollen concentrations in Europe, attributing these trends to an increase in anthropogenic CO2 emissions and temperature. However, the lack of water availability in southern Europe may prompt a trend towards lower flowering intensity, especially in herbaceous plants. Here we show variations in flowering intensity by analyzing the Annual Pollen Index (API) of 12 anemophilous taxa across 12 locations in the Iberian Peninsula, over the last two decades, and detecting the influence of the North Atlantic Oscillation (NAO). Results revealed differences in the distribution and flowering intensity of anemophilous species. A negative correlation was observed between airborne pollen concentrations and winter averages of the NAO index. This study confirms that changes in rainfall in the Mediterranean region, attributed to climate change, have an important impact on the phenology of plants. Copyright © 2016 Elsevier B.V. All rights reserved.

Meat mixture detection in Iberian pork sausages.

PubMed

Ortiz-Somovilla, V; España-España, F; De Pedro-Sanz, E J; Gaitán-Jurado, A J

2005-11-01

Five homogenized meat mixture treatments of Iberian (I) and/or Standard (S) pork were set up. Each treatment was analyzed by NIRS as a fresh product (N=75) and as dry-cured sausage (N=75). Spectra acquisition was carried out using DA 7000 equipment (Perten Instruments), obtaining a total of 750 spectra. Several absorption peaks and bands were selected as the most representative for homogenized dry-cured and fresh sausages. Discriminant analysis and mixture prediction equations were carried out based on the spectral data gathered. The best results using discriminant models were for fresh products, with 98.3% (calibration) and 60% (validation) correct classification. For dry-cured sausages 91.7% (calibration) and 80% (validation) of the samples were correctly classified. Models developed using mixture prediction equations showed SECV=4.7, r(2)=0.98 (calibration) and 73.3% of validation set were correctly classified for the fresh product. These values for dry-cured sausages were SECV=5.9, r(2)=0.99 (calibration) and 93.3% correctly classified for validation.

Diversity of nitrogen isotopes and protein status in caribou: implications for monitoring northern ungulates

USGS Publications Warehouse

Gustine, David D.; Barboza, Perry S.; Lawler, James P.; Adams, Layne G.; Parker, Kathy L.; Arthur, Steve M.; Shults, Brad S.

2012-01-01

Nutritional condition is an important determinant of productivity and survival in caribou (Rangifer tarandus). We used samples of excreta (n  =  1,150) to estimate diet composition from microhistology and 2 isotopic proxies of protein status for 2 ecotypes of caribou in 4 herds in late winter (2006–2008). Isotopes of nitrogen (δ15N in parts per thousand [‰]) from excreta samples (urea, diet, and body N) were used to estimate indexes of protein status: the proportion of urea N derived from body N (p-UN) and the difference between the δ15N of the body and urinary urea (Δbody-urea). We examined dietary and terrain characteristics, δ15N, p-UN, and Δbody-urea by ecotype, herd, year, and foraging site. Multiple regression and an information-theoretic approach were used to evaluate correlates of protein status at each foraging site. The dietary and terrain characteristics of foraging sites did not vary by ecotype or herd (P > 0.108); diets were dominated by lichens (68% ± 14.1% SD). The δ15N of urea, diet, body N, p-UN, and Δbody-urea varied among foraging sites within each herd (P 15N of urinary urea was typically low (−4.68‰ ± 2.67‰ SD). Dietary N also had low δ15N (−4.18‰ ± 0.92‰ SD), whereas body N was generally heavier in 15N (2.20‰ ± 1.56‰ SD) than urinary urea or the diet. Both measures of protein status were similarly diverse between ecotypes and among herds, which limited their applicability to monitor protein status at the population level. Although we observed limitations to interpreting estimates of p-UN from highly vagile ungulates, the Δbody-urea may prove to be a useful index of protein status at smaller spatial and temporal scales. Indeed, a portion of the observed variance (r2  =  0.26) in Δbody-urea at each foraging site was explained by the proportion of shrubs in the winter diet. There remains potential in using δ15N in excreta as a noninvasive tool for evaluating protein status in northern ungulates; however

Regional Climate Simulations of the Hydrological Cycle in the Iberian Peninsula with a Coupled WRF-HYDRO Model

NASA Astrophysics Data System (ADS)

Rios-Entenza, A.; Miguez-Macho, G.

2008-12-01

Land-atmosphere water exchanges and heat fluxes play an important role in climate and particularly in controlling precipitation in water-limited regions. One of such regions is the Iberian Peninsula, and in this study we examine the relevance of water recycling in convective precipitation regimes of the Fall and Spring there, when rainfall is critical for agriculture and many other human activities. We conducted simulations with WRF-ARW model at 5 km horizontal resolution, using a 1500 km x 1500 km nested grid that covers the Iberian Peninsula, with a parent domain that uses spectral nudging in order to avoid the distortion of the large-scale circulation caused by the interaction of the modeled flow with the lateral boundaries of the nested grid. For land-surface interactions we coupled WRF with the LEAF-HYDRO land surface model, which includes water table dynamics. We use therefore a tool that simulates the entire water cycle, including the water table, which has been reported to be critical for soil moisture dynamics in semi-arid regions like the Iberian Peninsula. For each one of the events that we selected, we performed two simulations: a control one, where all land-atmosphere feedbacks are taken into account, and the experiment, where infiltration of the precipitated water into the soil was suppressed. In this manner we explore the role of upward latent and sensible heat fluxes and evapotranspiration in precipitation dynamics. Preliminary results suggest that water recycling is a key factor in extending convective precipitation during several days, and that the total new water added in the area as a whole is only a fraction of the total measured rainfall. An estimation of this fraction is very important to better understanding the water budget and for hydrological planning in this water-stressed region.

Shiga Toxins, and the Genes Encoding Them, in Fecal Samples from Native Idaho Ungulates▿

PubMed Central

Gilbreath, Jeremy J.; Shields, Malcolm S.; Smith, Rebekah L.; Farrell, Larry D.; Sheridan, Peter P.; Spiegel, Kathleen M.

2009-01-01

Cattle are a known reservoir of Shiga toxin-producing Escherichia coli. The prevalence and stability of Shiga toxin and/or Shiga toxin genes among native wild ungulates in Idaho were investigated. The frequency of both Shiga genes and toxin was similar to that reported for Idaho cattle (∼19%). PMID:19060170

Wildlife-livestock interactions in a western rangeland setting: quantifying disease-relevant contacts

Treesearch

Heinrich zu Dohna; Dannele E. Peck; Bruce K. Johnson; Aaron Reeves; Brant A. Schumaker

2014-01-01

Disease transmission between wild ungulates and domestic livestock is an important and challenging animal health issue. The potential for disease transmission between wildlife and livestock is notoriously difficult to estimate. The first step for estimating the potential for between-species disease transmission is to quantify proximity between individuals of different...

Landscape simulation of foraging by elk, mule deer, and cattle on summer range.

Treesearch

Alan A. Ager; Bruce K. Johnson; Priscilla K. Coe; Michael J. Wisdom

2004-01-01

Cattle, mule deer (Odocoileus hemionus) and elk (Cervus elaphus) share more area of spring, summer and fall range than any other combination of wild and domestic ungulates in western North America (Wisdom and Thomas 1996). Not surprisingly, conflicts over perceived competition for forage have a long history, yet knowledge about...

Seroprevalence of Toxoplasma gondii Infection in Wild Boars, Wild Rabbits, and Wild Chickens in Hubei Province, China.

PubMed

Luo, Houqiang; Li, Kun; Shahzad, Muhammad; Zhang, Hui; Lan, Yanfang; Xiong, Xiong

2017-02-01

Toxoplasma gondii causes serious infection worldwide in humans and animals. In this study, the seroepidemiology of toxoplasmosis was investigated in wild boars ( Sus scrofa ) (n=377), wild rabbits (cape hare, Lapus capensis ) (n=331), and wild chickens (red junglefwol, Gallus gallus ) (n=571) in 4 forested and country sided area of Hubei province of China. For this, blood samples were collected and tested by indirect hemagglutination test (IHA). The seroprevalence was found to be 7.2%, 5.1%, and 12.6% in wild boars, rabbits, and chickens, respectively, with significant differences among these species. The prevalence of T. gondii infection in male and female wild boars was found to be 7.9% and 6.5% ( P <0.01), in male and female rabbits was 5.6% and 4.9% ( P <0.01), and in male and female chickens was 17.1% and 7.7% ( P <0.01), respectively, with significant differences between 2 genders of chickens ( P <0.01). The findings of this study may help in planning of the prevention measures against T. gondii infection in wild animals in this area.

Sensory and consumer evaluation of pork loins from crossbreeds between Danish Landrace, Yorkshire, Duroc, Iberian and Mangalitza.

PubMed

Straadt, Ida K; Aaslyng, Margit D; Bertram, Hanne Christine

2013-09-01

Iberian (I) and Mangalitza (M) boars were crossed with Duroc (D) and Landrace/Yorkshire (LY) sows and compared with the traditional crossbreed DLY. The sensory attributes were analysed, and consumers evaluated the fried loins. Gas chromatography (GC) aroma analysis was performed on the fried meat, and fatty acid composition was determined on the loin and the subcutaneous fat, respectively. No marked differences were found in odour, appearance or flavour/taste between the alternative crossbreeds and DLY; however, the alternative crossbreeds had improved textural properties. Consumer evaluation revealed that the alternative crossbreeds obtained positive associations compared with DLY, and MD was ranked best or second best by almost 60% of the consumers. No pronounced differences were found in the aroma compounds between the different crossbreeds. Correlations were found between the fatty acid composition and sensory attributes. In conclusion, by crossing the alternative breeds Iberian and Mangalitza with traditional Danish pig breeds it is possible to produce pork with attractive sensory attributes. Copyright © 2013 Elsevier Ltd. All rights reserved.

Authentication of fattening diet of Iberian pigs according to their volatile compounds profile from raw subcutaneous fat.

PubMed

Narváez-Rivas, M; Pablos, F; Jurado, J M; León-Camacho, M

2011-02-01

The composition of volatile components of subcutaneous fat from Iberian pig has been studied. Purge and trap gas chromatography-mass spectrometry has been used. The composition of the volatile fraction of subcutaneous fat has been used for authentication purposes of different types of Iberian pig fat. Three types of this product have been considered, montanera, extensive cebo and intensive cebo. With classification purposes, several pattern recognition techniques have been applied. In order to find out possible tendencies in the sample distribution as well as the discriminant power of the variables, principal component analysis was applied as visualisation technique. Linear discriminant analysis (LDA) and soft independent modelling by class analogy (SIMCA) were used to obtain suitable classification models. LDA and SIMCA allowed the differentiation of three fattening diets by using the contents in 2,2,4,6,6-pentamethyl-heptane, m-xylene, 2,4-dimethyl-heptane, 6-methyl-tridecane, 1-methoxy-2-propanol, isopropyl alcohol, o-xylene, 3-ethyl-2,2-dimethyl-oxirane, 2,6-dimethyl-undecane, 3-methyl-3-pentanol and limonene.

Phylogenetic Analysis Shows That Neolithic Slate Plaques from the Southwestern Iberian Peninsula Are Not Genealogical Recording Systems

PubMed Central

García Rivero, Daniel; O'Brien, Michael J.

2014-01-01

Prehistoric material culture proposed to be symbolic in nature has been the object of considerable archaeological work from diverse theoretical perspectives, yet rarely are methodological tools used to test the interpretations. The lack of testing is often justified by invoking the opinion that the slippery nature of past human symbolism cannot easily be tackled by the scientific method. One such case, from the southwestern Iberian Peninsula, involves engraved stone plaques from megalithic funerary monuments dating ca. 3,500–2,750 B.C. (calibrated age). One widely accepted proposal is that the plaques are ancient mnemonic devices that record genealogies. The analysis reported here demonstrates that this is not the case, even when the most supportive data and techniques are used. Rather, we suspect there was a common ideological background to the use of plaques that overlay the southwestern Iberian Peninsula, with little or no geographic patterning. This would entail a cultural system in which plaque design was based on a fundamental core idea, with a number of mutable and variable elements surrounding it. PMID:24558384

Palaeoenvironments of the last Neanderthals in SW Europe (MIS 3): Cova del Coll Verdaguer (Barcelona, NE of Iberian Peninsula)

NASA Astrophysics Data System (ADS)

Daura, J.; Sanz, M.; Allué, E.; Vaquero, M.; López-García, J. M.; Sánchez-Marco, A.; Domènech, R.; Martinell, J.; Carrión, J. S.; Ortiz, J. E.; Torres, T.; Arnold, L. J.; Benson, A.; Hoffmann, D. L.; Skinner, A. R.; Julià, R.

2017-12-01

Marine isotope stage 3 (MIS 3) was characterised by marked oscillations of extreme cold episodes with very short warm events during the stadial, and several regional differences have been recorded in the ice cores and marine deposits. The aim of this study is to reconstruct this period by evaluating both terrestrial and regional responses. Cova del Coll Verdaguer, a site located on the Iberian Peninsula, preserves a sedimentary deposit dated to between 34 and 56 ka BP and provides an opportunity for evaluating the impact of climate changes on the regional landmass during a period that coincided with the last Neanderthal population on the Iberian Peninsula. Several dating methods, including U-series, electron spin resonance, amino acid racemization and radiocarbon (14C), were applied to the site and the ages obtained show good agreement. The biotic evidence obtained is substantial, comprising floristic data from palynology and charcoal analysis, and faunal data from large and small mammals, birds and gastropods. Environmental reconstruction points to an initially open meadow landscape at the base of the sequence (∼56 ka) that progressively changes to a woodland environment dominated by conifers (∼34 ka). The presence of few thermophilous taxa, in contrast with lower latitudes of the Iberian Peninsula, is also detected. The environmental conditions of mid-altitude, Mediterranean, limestone mountains for the last Neanderthal populations appear to have been dominated by a forested landscape comprising boreal or mixed coniferous forest, characterised by a low usable biomass with poor comestible plant resources and dispersed herbivore populations.

Volatile hydrocarbon profile of Iberian dry-cured hams. A possible tool for authentication of hams according to the fattening diet.

PubMed

Narváez-Rivas, Mónica; Vicario, Isabel M; Alcalde, M Jesús; León-Camacho, Manuel

2010-06-15

The aims of this work were to carry out a comprehensive study of the volatile hydrocarbons of 34 Iberian dry-cured hams and to evaluate the efficiency of these compounds for discriminating hams according to the fattening system: "Montanera" (B) and "Cebo" (C). The samples of hams were obtained by mincing the semimembranosus and semitendinosus muscles from slices of dry-cured ham. The analyses were carried out by gas chromatography-mass spectrometry with a polar capillary column and after a previous extraction by Purge and Trap method. Forty-three volatile hydrocarbons were identified, 26 of them for the first time in Iberian dry-cured ham. Only five compounds showed significant differences between the two types of hams. Among the 33 volatile hydrocarbons, 22 of them allowed a complete discrimination of the two groups of hams according the fattening system.

Identifying and prioritizing ungulate migration routes for landscape-level conservation

USGS Publications Warehouse

Sawyer, H.; Kauffman, M.J.; Nielson, R.M.; Horne, J.S.

2009-01-01

As habitat loss and fragmentation increase across ungulate ranges, identifying and prioritizing migration routes for conservation has taken on new urgency. Here we present a general framework using the Brownian bridge movement model (BBMM) that: (1) provides a probabilistic estimate of the migration routes of a sampled population, (2) distinguishes between route segments that function as stopover sites vs. those used primarily as movement corridors, and (3) prioritizes routes for conservation based upon the proportion of the sampled population that uses them. We applied this approach to a migratory mule deer (Odocoileus hemionus) population in a pristine area of southwest Wyoming, USA, where 2000 gas wells and 1609 km of pipelines and roads have been proposed for development. Our analysis clearly delineated where migration routes occurred relative to proposed development and provided guidance for on-the-ground conservation efforts. Mule deer migration routes were characterized by a series of stopover sites where deer spent most of their time, connected by movement corridors through which deer moved quickly. Our findings suggest management strategies that differentiate between stopover sites and movement corridors may be warranted. Because some migration routes were used by more mule deer than others, proportional level of use may provide a reasonable metric by which routes can be prioritized for conservation. The methods we outline should be applicable to a wide range of species that inhabit regions where migration routes are threatened or poorly understood. ?? 2009 by the Ecological Society of America.

Identifying and prioritizing ungulate migration routes for landscape-level conservation

USGS Publications Warehouse

Sawyer, Hall; Kauffman, Matthew J.; Nielson, Ryan M.; Horne, Jon S.

2009-01-01

As habitat loss and fragmentation increase across ungulate ranges, identifying and prioritizing migration routes for conservation has taken on new urgency. Here we present a general framework using the Brownian bridge movement model (BBMM) that: (1) provides a probabilistic estimate of the migration routes of a sampled population, (2) distinguishes between route segments that function as stopover sites vs. those used primarily as movement corridors, and (3) prioritizes routes for conservation based upon the proportion of the sampled population that uses them. We applied this approach to a migratory mule deer (Odocoileus hemionus) population in a pristine area of southwest Wyoming, USA, where 2000 gas wells and 1609 km of pipelines and roads have been proposed for development. Our analysis clearly delineated where migration routes occurred relative to proposed development and provided guidance for on-the-ground conservation efforts. Mule deer migration routes were characterized by a series of stopover sites where deer spent most of their time, connected by movement corridors through which deer moved quickly. Our findings suggest management strategies that differentiate between stopover sites and movement corridors may be warranted. Because some migration routes were used by more mule deer than others, proportional level of use may provide a reasonable metric by which routes can be prioritized for conservation. The methods we outline should be applicable to a wide range of species that inhabit regions where migration routes are threatened or poorly understood.

Assessing extreme droughts in the Iberian Peninsula during 1750-1850 from rogation ceremonies

NASA Astrophysics Data System (ADS)

Domínguez-Castro, F.; Ribera, P.; García-Herrera, R.; Vaquero, J. M.; Barriendos, M.; Cuadrat, J. M.; Moreno, J. M.

2011-11-01

Among the different meteorological risks, droughts are the ones with the highest socio-economical impact in the Iberian Peninsula. Drought events have been largely studied in the instrumental period, but very little is known about the characteristics of droughts in the preinstrumental period. In this work, new series of rogation ceremonies identify severe droughts within the period 1750-1850. The overlapping of the rogation series with some instrumental series served to identify some climatic characteristics of rogation ceremonies: a) during spring, rainfall deficits needed to celebrate rogation ceremonies are smaller than in any other season; b) when the number of location celebrating rogations increases in a region the hydrological deficit on each location increases as well. On the other hand, it was found that the periods 1750-1754 and 1779-1783 are probably the driest periods of the 101 analyzed years. Both show an important number of rogations all over the Iberian Peninsula and during all the seasons. The most extended drought of this period occurred during the spring of 1817, affecting 15 of the 16 locations studied. This drought was influenced by the Tambora eruption (1815). The study of the climate footprint of this eruption and its comparison with similar situations in the series suggest that the spring drought of 1824 may be associated with the eruptions of the Galunggung and Usu volcanoes (1822). Further studies are required to confirm this fact and understand the atmospheric mechanisms involved.

East Atlantic (EA) and North Atlantic Oscillation (NAO) interplay over the Iberian Peninsula for the last two millennia

NASA Astrophysics Data System (ADS)

Hernandez, A.; Sánchez-López, G.; Pla-Rabes, S.; Trigo, R.; Toro, M.; Granados, I.; Sáez, A.; Masque, P.; Pueyo, J. J.; Rubio-Inglés, M. J.; Giralt, S.

2016-12-01

The multi-proxy approach from sediments of an Iberian alpine lake allowed us to establish the climatic conditions in the Iberian Central Range (ICR) over the last two millennia. The comparison with other Iberian reconstructions permitted to identify possible forcing climate mechanisms. Climatic conditions would be transmitted to the sediments via the frequency of intense run-off events, derived from rain-on-snow events, and the lake productivity, ruled by ice-cover duration. The early Roman Period (RP; 200 BC - 350 AD) in the ICR was characterized by oscillations of intense run-off events, as a consequence of an alternation between cold and warm periods. From the second half of the RP to the onset of the Early Middle Ages (EMA; 350 - 500 AD) an increase in the intense run-off events suggests warm conditions, although a noticeable decrease during the rest of the EMA (500 - 900 AD) evidences a shift to very cold temperatures in this region. In terms of humidity, both RP and EMA climatic periods displayed a transition from a dry to a wet scenario that led to a decrease in lake productivity. These climatic conditions have been registered by other reconstructions in the Iberian Peninsula (IP), and a North-South humidity gradient could be envisaged, although spatial climatic discrepancies were significant. Precipitation and temperature in the IP present a more homogeneous spatial pattern when the NAO and EA modes have the same sign than when they have the opposite sign. Hence, a predominance of periods with NAO - EA in opposite phases could explain the climatic spatial heterogeneity in the IP during these two periods. The Medieval Climate Anomaly (MCA; 900 - 1300 AD) in the ICR was characterized by warm and dry conditions represented by an increase in exceptional run-off episodes and lake productivity whereas the Little Ice Age (LIA; 1300 - 1850 AD) showed the opposite scenario. Similar climatic conditions were registered in all the IP, reflecting a spatial climatic

MAAG Job Position: Rolebooks and Technical Vocabulary (Iberian Spanish). Methods for Determining Language Objectives and Criteria, Volume VII.

ERIC Educational Resources Information Center

Setzler, Hubert H., Jr.; And Others

Rolebooks and technical Iberian Spanish vocabulary for the job position of military advisory and assistance group (MAAG) officer of the Air Force are presented. The materials are part of the communication/language objectives-based system (C/LOBS), which supports the front-end analysis efforts of the Defense Language Institute Foreign Language…

First record of Hermetia illucens (Diptera: Stratiomyidae) on human corpses in Iberian Peninsula.

PubMed

Martínez-Sánchez, Anabel; Magaña, Concepción; Saloña, Marta; Rojo, Santos

2011-03-20

This article presents the first record of Hermetia illucens larvae on a human corpse in Spain (the second case report in Europe). Prepupae of H. illucens, and other insects, were recovered from the dead body of a 72-year-old man in an advanced stage of decomposition. The body was located in Reus (NE Spain), in October 1998. This article provides additional biological data on experimental studies and an update on the geographic distribution of this species in the Iberian Peninsula. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

Integrating livestock production and wildlife in a sagebrush-grass ecosystem

Treesearch

Michael L. Wolfe; Gregg E. Simonds; Rick Danvir; William J. Hopkin

1996-01-01

Management of a 775-km2, privately-owned ranch in northeastern Utah exemplifies a progressive approach to utilizing domestic livestock and wild ungulates, elk (Cervus elaphus), mule deer (Odocoileus hemionus), and pronghorn (Antilocapra americana), for economic return while maintaining or enhancing land health. The management program on the Deseret Ranch includes the...

Spatial Distribution of Dorylaimid and Mononchid Nematodes from Southeast Iberian Peninsula: Chorological Relationships among Species

PubMed Central

Liébanas, G.; Peña-Santiago, R.; Real, R.; Márquez, A. L.

2002-01-01

The spatial distribution of 138 Dorylaimid and Mononchid species collected in a natural area from the Southeast Iberian Peninsula was studied. A chorological classification was used to examine distribution patterns shared by groups of species. Eighty species were classified into 14 collective and 16 individual chorotypes. The geographical projections of several collective chorotypes are illustrated along with their corresponding distribution maps. The importance of this analysis to nematological study is briefly discussed. PMID:19265962

Inclusion of seminal plasma in sperm cryopreservation of Iberian pig.

PubMed

Gómez-Fernández, José; Gómez-Izquierdo, Emilio; Tomás, Cristina; González-Bulnes, Antonio; Sánchez-Sánchez, Raúl; de Mercado, Eduardo

2012-01-01

The aim of the present study was to evaluate the inclusion of seminal plasma (SP) in the freezing extender, trying to preserve as much as possible of SP with spermatozoa from Iberian pigs, thus improving the conservation of animal genetic resources of this breed. Experiment 1, evaluated the effect of substituting water with SP as diluent in the freezing media in different proportions (0%, 10%, 25%, 50%, 75% and 100%), over pre-freezing (at 10°C and 5°C) and post-thawing sperm quality. The results showed that over 50% of SP in the extender, significantly decreased sperm quality in comparison to the control sample (0% SP) and the samples with 10% and 25% of SP (P<0.05). No significant differences were found between the control sample and the samples with 10% and 25% SP (P>0.05), but treatment with 25% did not show significant differences between the time of incubation at 37°C after thawing (P>0.05), showing greater sperm quality resistance over time. Experiment 2, evaluated the effect of prolonged incubation period, until 480min (simulating the lifespan of sperm in the female genital tract), of sperm samples with 0%, 10% and 25% of SP. Treatment with 25% of SP maintained better sperm quality over time, compared to control sample. Significant differences were observed especially in the parameters of motility analysis (TMS, total motile spermatozoa; PMS: progressive motility spermatozoa. P<0.05). In Experiment 3, the effect of the presence of SP was evaluated during the thawing process. Although some differences were observed between treatments, these differences were not as clear as the previous experiments. In conclusion, replacement of 25% of the water by SP as diluent in the freezing extender could be considered the maximum percentage of inclusion, without harmful effects to the sperm. In addition, this proportion of SP maintained Iberian sperm quality for longer time when it was present during the freezing and thawing process. Copyright © 2012 Elsevier B

Energy-environmental benefits and economic feasibility of anaerobic codigestion of Iberian pig slaughterhouse and tomato industry wastes in Extremadura (Spain).

PubMed

González-González, A; Cuadros, F; Ruiz-Celma, A; López-Rodríguez, F

2013-05-01

Anaerobic digestion of Iberian pig slaughterhouse and tomato industry wastes, as well as codigestion operations from such residues, are reported to achieve 54-80% reduction in Chemical Oxygen Demand and 6-19 N m(3)/m(3) substrate methane production. Furthermore, 0.79-0.88 m(3)water/m(3) substrate is seen to be recovered after the above mentioned operations, which might be used as irrigation water, and 0.12-0.21 m(3)agricultural amendment/m(3) substrate with 91-98% moisture content. The present paper also reports on the economic feasibility of both an anaerobic codigestion plant operating with 60% slaughterhouse wastes/40% tomato industry wastes (optimal ratio obtained in previous laboratory-scaled experiments), and an anaerobic digestion plant for Iberian pig slaughterhouse waste. Payback times are reported as 14.86 and 3.73 years, respectively. Copyright © 2013 Elsevier Ltd. All rights reserved.

Sperm characteristics and heterologous in vitro fertilisation capacity of Iberian ibex (Capra pyrenaica) epididymal sperm, frozen in the presence of the enzymatic antioxidant catalase.

PubMed

López-Saucedo, J; Paramio, M T; Fierro, R; Izquierdo, D; Catalá, M G; Coloma, M A; Toledano-Díaz, A; López-Sebastián, A; Santiago-Moreno, J

2014-06-01

The aim of this work was to evaluate the protective effect of catalase (CAT) on frozen/thawed ibex epididymal sperm recovered post mortem, and to detect any harmful effect this might have on sperm fertilisation capacity. Epididymal spermatozoa were diluted using a Tris-citric acid-glucose medium (TCG) composed of 3.8% Tris (w/v), 2.2% citric acid (w/v), 0.6% glucose (w/v), 5% glycerol (v/v), and 6% egg yolk (v/v). Sperm masses from the right epididymis were diluted with TCG medium, while those from the left were diluted with TCG medium supplemented with 200IU/mL CAT. Heterologous in vitro fertilisation (IVF) was used to assess the fertilisation capacity of this sperm. The addition of CAT to the extender did not improve frozen/thawed sperm variables. Moreover, a reduced fertilisation capacity was detected: sperm diluted with TCG provided 25.5% 2PN zygotes, while just 13.2% was recorded for that diluted with TCG-CAT (P<0.01). The percentage of cleaved embryos at 48hpi was higher (P<0.01) with the TCG sperm than with the TCG-CAT sperm (16.7% vs. 7.6%). The use of 200IU/mL CAT as an additive cannot, therefore, be recommended for the preservation of ibex epididymal sperm. Other antioxidants should, however, be tested in both this and related wild mountain ungulates. Copyright © 2014 Elsevier Inc. All rights reserved.

SEASONAL AND DEMOGRAPHIC FACTORS INFLUENCING GASTROINTESTINAL PARASITISM IN UNGULATES OF ETOSHA NATIONAL PARK

PubMed Central

Turner, Wendy C.; Getz, Wayne M.

2011-01-01

Host-parasite dynamics can be strongly affected by seasonality and age-related host immune responses. We investigated how observed variation in the prevalence and intensity of parasite egg or oocyst shedding in four co-occurring ungulate species may reflect underlying seasonal variation in transmission and host immunity. This study was conducted July 2005–October 2006 in Etosha National Park, Namibia, using indices of parasitism recorded from 1,022 fecal samples collected from plains zebra (Equus quagga), springbok (Antidorcas marsupialis), blue wildebeest (Connochaetes taurinus), and gemsbok (Oryx gazella). The presence and intensity of strongyle nematodes, Strongyloides spp. and Eimeria spp. parasites, were strongly seasonal for most host-parasite combinations, with more hosts infected in the wet season than the dry season. Strongyle intensity in zebra was significantly lower in juveniles than adults, and in springbok hosts, Eimeria spp. intensity was significantly greater in juveniles than adults. These results provide evidence that acquired immunity is less protective against strongyle nematodes than Eimeria spp. infections. The seasonal patterns in parasitism further indicate that the long dry season may limit development and survival of parasite stages in the environment and, as a result, host contact and parasite transmission. PMID:20966262

Endoparasites of exotic ungulates from the Giraffidae and Camelidae families kept ex situ.

PubMed

Nosal, Paweł; Kowal, Jerzy; Kornaś, Sławomir; Wyrobisz, Anna; Skotnicki, Józef; Basiaga, Marta; Plucińska, Natalia E

2016-01-01

Giraffes and camels are popular attractions at zoological gardens. In order to present the diversity of parasites infecting exotic ungulates from zoos, faecal samples from three giraffes and six camels from both the Silesian Zoological Garden in Chorzów, and Kraków Zoological Garden, were examined. The research was carried out over a ten-month period in 2013 and 2014. In total, 100 faecal samples from 18 animals were analysed with the use of the McMaster method. Moreover, coccidian oocysts were incubated to investigate their development and larvoscopic examination was conducted to detect the presence of nematode species. Giraffes were infected with coccidia from the genus Eimeria, and gastrointestinal nematodes from the Strongylida order, and Trichuris and Aonhotheca genera. One male giraffe was uninfected. The level of infection in giraffes was low when compared to camels kept in both of the zoos. Limited contact with other animal species contributed greatly to the lower level of infection in camels from Kraków Zoo than those from Chorzów, which were kept in the same enclosure as alpacas and Shetland ponies.

Precipitation extremes in the Iberian Peninsula: an overview of the CLIPE project

NASA Astrophysics Data System (ADS)

Santos, João A.; Gonçalves, Paulo M.; Rodrigues, Tiago; Carvalho, Maria J.; Rocha, Alfredo

2014-05-01

The main aims of the project "Climate change of precipitation extreme episodes in the Iberian Peninsula and its forcing mechanisms - CLIPE" are 1) to diagnose the climate change signal in the precipitation extremes over the Iberian Peninsula (IP) and 2) to identify the underlying physical mechanisms. For the first purpose, a multi-model ensemble of 25 Regional Climate Model (RCM) simulations, from the ENSEMBLES project, is used. These experiments were generated by 15 RCMs, driven by five General Circulation Models (GCMs) under both historic conditions (1951-2000) and SRES A1B scenario (2001-2100). In this project, daily precipitation and mean sea level pressure, for the periods 1961-1990 (recent past) and 2021-2100 (future), are used. Using the Standardised Precipitation Index (SPI) on a daily basis, a precipitation extreme is defined by the pair of threshold values (Dmin, Imin), where Dmin is the minimum number of consecutive days with daily SPI above the Imin value. For both past and future climates, a precipitation extreme of a specific type is then characterised by two variables: the number of episodes with a specific duration in days and the number of episodes with a specific mean intensity (SPI/duration). Climate change is also assessed by changes in their Probability Density Functions (PDFs), estimated at sectors representative of different precipitation regimes. Lastly, for the second objective of this project, links between precipitation and Circulation Weather Regimes (CWRs) are explored for both past and future climates. Acknowledgments: this work is supported by European Union Funds (FEDER/COMPETE - Operational Competitiveness Programme) and by national funds (FCT - Portuguese Foundation for Science and Technology) under the project CLIPE (PTDC/AAC-CLI/111733/2009).

Wildlife reservoirs for vector-borne canine, feline and zoonotic infections in Austria

PubMed Central

Duscher, Georg G.; Leschnik, Michael; Fuehrer, Hans-Peter; Joachim, Anja

2014-01-01

Austria's mammalian wildlife comprises a large variety of species, acting and interacting in different ways as reservoir and intermediate and definitive hosts for different pathogens that can be transmitted to pets and/or humans. Foxes and other wild canids are responsible for maintaining zoonotic agents, e.g. Echinococcus multilocularis, as well as pet-relevant pathogens, e.g. Hepatozoon canis. Together with the canids, and less commonly felids, rodents play a major role as intermediate and paratenic hosts. They carry viruses such as tick-borne encephalitis virus (TBEV), bacteria including Borrelia spp., protozoa such as Toxoplasma gondii, and helminths such as Toxocara canis. The role of wild ungulates, especially ruminants, as reservoirs for zoonotic disease on the other hand seems to be negligible, although the deer filaroid Onchocerca jakutensis has been described to infect humans. Deer may also harbour certain Anaplasma phagocytophilum strains with so far unclear potential to infect humans. The major role of deer as reservoirs is for ticks, mainly adults, thus maintaining the life cycle of these vectors and their distribution. Wild boar seem to be an exception among the ungulates as, in their interaction with the fox, they can introduce food-borne zoonotic agents such as Trichinella britovi and Alaria alata into the human food chain. PMID:25830102

Scott Wilde | NREL

Science.gov Websites

Wilde Scott Wilde NWTC Research Operations Manager Scott.Wilde@nrel.gov | 303-384-7074 Scott began the NWTC. He is now the Technical Operations Manager at the NWTC. Scott has worked as a supervisor in led large crews on hoisting and rigging activities and operations and maintenance activities. Scott

Linking seasonal home range size with habitat selection and movement in a mountain ungulate.

PubMed

Viana, Duarte S; Granados, José Enrique; Fandos, Paulino; Pérez, Jesús M; Cano-Manuel, Francisco Javier; Burón, Daniel; Fandos, Guillermo; Aguado, María Ángeles Párraga; Figuerola, Jordi; Soriguer, Ramón C

2018-01-01

Space use by animals is determined by the interplay between movement and the environment, and is thus mediated by habitat selection, biotic interactions and intrinsic factors of moving individuals. These processes ultimately determine home range size, but their relative contributions and dynamic nature remain less explored. We investigated the role of habitat selection, movement unrelated to habitat selection and intrinsic factors related to sex in driving space use and home range size in Iberian ibex, Capra pyrenaica . We used GPS collars to track ibex across the year in two different geographical areas of Sierra Nevada, Spain, and measured habitat variables related to forage and roost availability. By using integrated step selection analysis (iSSA), we show that habitat selection was important to explain space use by ibex. As a consequence, movement was constrained by habitat selection, as observed displacement rate was shorter than expected under null selection. Selection-independent movement, selection strength and resource availability were important drivers of seasonal home range size. Both displacement rate and directional persistence had a positive relationship with home range size while accounting for habitat selection, suggesting that individual characteristics and state may also affect home range size. Ibex living at higher altitudes, where resource availability shows stronger altitudinal gradients across the year, had larger home ranges. Home range size was larger in spring and autumn, when ibex ascend and descend back, and smaller in summer and winter, when resources are more stable. Therefore, home range size decreased with resource availability. Finally, males had larger home ranges than females, which might be explained by differences in body size and reproductive behaviour. Movement, selection strength, resource availability and intrinsic factors related to sex determined home range size of Iberian ibex. Our results highlight the need to integrate

Patterns of acoustic variation in Cicada barbara Stål (Hemiptera, Cicadoidea) from the Iberian Peninsula and Morocco.

PubMed

Pinto-Juma, G A; Seabra, S G; Quartau, J A

2008-02-01

Field recordings of the calling song and of an amplitude modulated signal produced by males of Cicada barbara from North Africa and the Iberian Peninsula were analysed in order to assess the geographical acoustic variation and the potential usefulness of acoustic data in the discrimination of subspecies and populations. Sound recordings were digitized and the frequency and temporal properties of the calls of each cicada were analysed. In all regions studied, peak frequency, quartiles 25, 50 and 75% and syllable rate showed low coefficients of variation suggesting inherent static properties. All frequency variables were correlated with the latitude, decreasing from south to north. In addition, most acoustic variables of the calling song showed significant differences between regions, and PCA and DFA analyses supported a partitioning within this species between Iberian Peninsula+Ceuta and Morocco, corroborating mtDNA data on the same species. Therefore, the subspecific division of C. barbara into C. barbara barbara from Morocco and C. barbara lusitanica from Portugal, Spain and Ceuta finds support from the present acoustic analyses, a result which is also reinforced by molecular markers.

Validation of an Anaplasma marginale cELISA for use in the diagnosis of A. ovis infections in domestic sheep and Anaplasma spp. in wild ungulates.

PubMed

Scoles, Glen A; Goff, Will L; Lysyk, Timothy J; Lewis, Gregory S; Knowles, Donald P

2008-07-27

A commercially available (cELISA) kit for diagnosing Anaplasma marginale infection in cattle was validated for diagnosing A ovis infection in sheep using the bovine serum controls as supplied by the manufacturer (BcELISA) and sheep serum controls from pathogen-free sheep (OcELISA). True positives were identified using two previously established assays, a nested PCR (nPCR) test and an indirect immunofluorescent assay (IFA). The BcELISA was also applied to sera from various species of wild ruminants, comparing the results with the IFA. Receiver operating characteristic (ROC) analysis indicated that the predicted threshold inhibition for the BcELISA was 19.2. The sensitivity for the BcELISA was 98.2% and the specificity was 96.3%. The predicted threshold inhibition decreased to 14.3 for the OcELISA; the sensitivity was 96.5% and the specificity was 98.1%. There was >/=90% concordance between IFA and nPCR, as well as between the BcELISA at 19% inhibition cutoff and either IFA or PCR. Concordance between the cELISA and IFA using sera from elk, mule deer, bighorn sheep, pronghorn antelope, and black-tailed deer ranged from 64% to 100%. This commercially available cELISA test kit can be used very effectively to test domestic sheep for infection with A. ovis using the kit-supplied controls (i.e. the BcELISA) and a 19% inhibition cutoff; the kit may also be useful for detecting intra-erythrocytic Anaplasma infections in wild ruminants.

Evaluation of vaginal implant transmitters in elk (Cervus elaphus nelsoni).

Treesearch

Bruce K. Johnson; Terrance McCoy; Christopher O. Kochanny; Rachel C. Cook

2006-01-01

The effects of vaginal implant transmitters for tissue damage after 11 wk in 13 captive adult elk (Cervus elaphus nelsoni) and subsequent reproductive performance in 38 free-ranging elk were evaluated. Vaginal implant transmitters are designed to be shed at parturition and are used to locate birth sites of wild ungulates; however, potential adverse...

Forage composition, productivity, and utilization in the eastern Washington Cascade Range

Treesearch

John F. Lehmkuhl; Andrea L. Lyons; Edd Bracken; Jodi Leingang; William L. Gaines; Erich K. Dodson; Peter H. Singleton

2013-01-01

Provision of forage for wild and domestic ungulates, and the associated impacts of their herbivory, are contentious issues for wildland management in western North America. We quantified the composition, above-ground net production (ANP), and utilization of herbaceous and shrub vegetation in five non-forest and seven forest cover types across the core springsummer-...

Forage composition, productivity, and utilization in the Eastern Washington Cascade Range

Treesearch

John F. Lehmkuhl; Andrea L. Lyons; Edd Bracken; Jodi Leingang; William L. Gaines; Erich Kyle Dodson; Peter H. Singleton

2013-01-01

Provision of forage for wild and domestic ungulates, and the associated impacts of their herbivory, are contentious issues for wildland management in western North America. We quantified the composition, above-ground net production (ANP), and utilization of herbaceous and shrub vegetation in five non-forest and seven forest cover types across the core spring-...

Snapshot of viral infections in wild carnivores reveals ubiquity of parvovirus and susceptibility of Egyptian mongoose to feline panleukopenia virus.

PubMed

Duarte, Margarida D; Henriques, Ana Margarida; Barros, Sílvia Carla; Fagulha, Teresa; Mendonça, Paula; Carvalho, Paulo; Monteiro, Madalena; Fevereiro, Miguel; Basto, Mafalda P; Rosalino, Luís Miguel; Barros, Tânia; Bandeira, Victor; Fonseca, Carlos; Cunha, Mónica V

2013-01-01

The exposure of wild carnivores to viral pathogens, with emphasis on parvovirus (CPV/FPLV), was assessed based on the molecular screening of tissue samples from 128 hunted or accidentally road-killed animals collected in Portugal from 2008 to 2011, including Egyptian mongoose (Herpestes ichneumon, n = 99), red fox (Vulpes vulpes, n = 19), stone marten (Martes foina, n = 3), common genet (Genetta genetta, n = 3) and Eurasian badger (Meles meles, n = 4). A high prevalence of parvovirus DNA (63%) was detected among all surveyed species, particularly in mongooses (58%) and red foxes (79%), along with the presence of CPV/FPLV circulating antibodies that were identified in 90% of a subset of parvovirus-DNA positive samples. Most specimens were extensively autolysed, restricting macro and microscopic investigations for lesion evaluation. Whenever possible to examine, signs of active disease were not present, supporting the hypothesis that the parvovirus vp2 gene fragments detected by real-time PCR possibly correspond to viral DNA reminiscent from previous infections. The molecular characterization of viruses, based on the analysis of the complete or partial sequence of the vp2 gene, allowed typifying three viral strains of mongoose and four red fox's as feline panleukopenia virus (FPLV) and one stone marten's as newCPV-2b type. The genetic similarity found between the FPLV viruses from free-ranging and captive wild species originated in Portugal and publicly available comparable sequences, suggests a closer genetic relatedness among FPLV circulating in Portugal. Although the clinical and epidemiological significance of infection could not be established, this study evidences that exposure of sympatric wild carnivores to parvovirus is common and geographically widespread, potentially carrying a risk to susceptible populations at the wildlife-domestic interface and to threatened species, such as the wildcat (Felis silvestris) and the critically

Snapshot of Viral Infections in Wild Carnivores Reveals Ubiquity of Parvovirus and Susceptibility of Egyptian Mongoose to Feline Panleukopenia Virus

PubMed Central

Duarte, Margarida D.; Henriques, Ana Margarida; Barros, Sílvia Carla; Fagulha, Teresa; Mendonça, Paula; Carvalho, Paulo; Monteiro, Madalena; Fevereiro, Miguel; Basto, Mafalda P.; Rosalino, Luís Miguel; Barros, Tânia; Bandeira, Victor; Fonseca, Carlos; Cunha, Mónica V.

2013-01-01

The exposure of wild carnivores to viral pathogens, with emphasis on parvovirus (CPV/FPLV), was assessed based on the molecular screening of tissue samples from 128 hunted or accidentally road-killed animals collected in Portugal from 2008 to 2011, including Egyptian mongoose (Herpestes ichneumon, n = 99), red fox (Vulpes vulpes, n = 19), stone marten (Martes foina, n = 3), common genet (Genetta genetta, n = 3) and Eurasian badger (Meles meles, n = 4). A high prevalence of parvovirus DNA (63%) was detected among all surveyed species, particularly in mongooses (58%) and red foxes (79%), along with the presence of CPV/FPLV circulating antibodies that were identified in 90% of a subset of parvovirus-DNA positive samples. Most specimens were extensively autolysed, restricting macro and microscopic investigations for lesion evaluation. Whenever possible to examine, signs of active disease were not present, supporting the hypothesis that the parvovirus vp2 gene fragments detected by real-time PCR possibly correspond to viral DNA reminiscent from previous infections. The molecular characterization of viruses, based on the analysis of the complete or partial sequence of the vp2 gene, allowed typifying three viral strains of mongoose and four red fox’s as feline panleukopenia virus (FPLV) and one stone marten’s as newCPV-2b type. The genetic similarity found between the FPLV viruses from free-ranging and captive wild species originated in Portugal and publicly available comparable sequences, suggests a closer genetic relatedness among FPLV circulating in Portugal. Although the clinical and epidemiological significance of infection could not be established, this study evidences that exposure of sympatric wild carnivores to parvovirus is common and geographically widespread, potentially carrying a risk to susceptible populations at the wildlife-domestic interface and to threatened species, such as the wildcat (Felis silvestris) and the critically

Altitudinally divergent adult phenotypes in Iberian wall lizards are not driven by egg differences or hatchling growth rates.

PubMed

Ortega, Jesús; López, Pilar; Martín, José

2015-02-01

The interplay between ecological conditions and life histories has been widely acknowledged in vertebrates, particularly in lizards. Environmental conditions may exert different selective pressures and produce divergent phenotypes even in geographically and genetically close populations. The Iberian wall lizard constitutes a perfect model organism as it is considered a species complex with a complicated evolutionary history. Here, we focus on two proximate populations in which we examined adult morphology and reproductive investment of wild-caught lizards along a 500-m altitudinal gradient with contrasting environmental conditions, where adults show marked morphological differences in spite of being closely related. Also, we performed a common garden experiment to examine embryonic and hatchling growth. We focused on reproductive investment per clutch, incubation time, egg size, morphology and growth rate of hatchlings. Results showed clutch size differences between populations that were independent of the larger body size of highland females. However, there were no egg morphological differences between populations, except for egg width, and this difference disappeared after controlling for female body size. Hatchling lizards from both populations did not differ in morphology. Moreover, we did not observe differences between populations or sexes in hatchling growth. Overall, we provide evidence that the differences in adult body size and clutch size are not driven by size at hatching which is not contributed to by egg size, nor are intrinsic hatchling growth rates associated with the environmental conditions experienced in our common garden experiment, suggesting that adult phenotypes are not the result of intrinsic differences between populations.

Linking evolutionary lineage with parasite and pathogen prevalence in the Iberian honey bee.

PubMed

Jara, Laura; Cepero, Almudena; Garrido-Bailón, Encarna; Martín-Hernández, Raquel; Higes, Mariano; De la Rúa, Pilar

2012-05-01

The recent decline in honey bee colonies observed in both European countries and worldwide is of great interest and concern, although the underlying causes remain poorly understood. In recent years, growing evidence has implicated parasites and pathogens in this decline of both the vitality and number of honey bee colonies. The Iberian Peninsula provides an interesting environment in which to study the occurrence of pathogens and parasites in the host honey bee populations due to the presence of two evolutionary lineages in A. m. iberiensis (Western European [M] or African [A]). Here, we provide the first evidence linking the population structure of the Iberian honey bee with the prevalence of some of its most important parasites and pathogens: the Varroa destructor mite and the microsporidia Nosema apis and Nosema ceranae. Using data collected in two surveys conducted in 2006 and 2010 in 41 Spanish provinces, the evolutionary lineage and the presence of the three parasitic organisms cited above were analyzed in a total of 228 colonies. In 2006 N. apis was found in a significantly higher proportion of M lineage honey bees than in the A lineage. However, in 2010 this situation had changed significantly due to a higher prevalence of N. ceranae. We observed no significant relationships in either year between the distributions of V. destructor or N. ceranae and the evolutionary lineage present in A. m. iberiensis colonies, but the effects of these organisms on the genetic diversity of the honey bee populations need further research. Copyright © 2012 Elsevier Inc. All rights reserved.

Magnetotelluric Imaging of the Lithosphere Across the Variscan Orogen (Iberian Autochthonous Domain, NW Iberia)

NASA Astrophysics Data System (ADS)

Alves Ribeiro, J.; Monteiro-Santos, F. A.; Pereira, M. F.; Díez Fernández, R.; Dias da Silva, Í.; Nascimento, C.; Silva, J. B.

2017-12-01

A new magnetotelluric (MT) survey comprising 17 MT soundings throughout a 30 km long N30°W transect in the Iberian autochthons domain of NW Iberia (Central Iberian Zone) is presented. The 2-D inversion model shows the resistivity structure of the continental crust up to 10 km depth, heretofore unavailable for this region of the Variscan Orogen. The MT model reveals a wavy structure separating a conductive upper layer underlain by a resistive layer, thus picturing the two main tectonic blocks of a large-scale D2 extensional shear zone (i.e., Pinhel shear zone). The upper layer represents a lower grade metamorphic domain that includes graphite-rich rocks. The lower layer consists of high-grade metamorphic rocks that experienced partial melting and are associated with granites (more resistive) emplaced during crustal thinning. The wavy structure is the result of superimposed crustal shortening responsible for the development of large-scale D3 folds (e.g., Marofa synform), later deflected and refolded by a D4 strike-slip shear zone (i.e., Juzbado-Penalva do Castelo shear zone). The later contribution to the final structure of the crust is marked by the intrusion of postkinematic granitic rocks and the propagation of steeply dipping brittle fault zones. Our study demonstrates that MT imaging is a powerful tool to understand complex crustal structures of ancient orogens in order to design future prospecting surveys for mineral deposits of economic interest.

Groundwater influence on soil moisture memory and land-atmosphere interactions over the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Martinez-de la Torre, Alberto; Miguez-Macho, Gonzalo

2017-04-01

We investigate the memory introduced in soil moisture fields by groundwater long timescales of variation in the semi-arid regions of the Iberian Peninsula with the LEAFHYDRO soil-vegetation-hydrology model, which includes a dynamic water table fully coupled to soil moisture and river flow via 2-way fluxes. We select a 10-year period (1989-1998) with transitions from wet to dry to again wet long lasting conditions and we carry out simulations at 2.5 km spatial resolution forced by ERA-Interim and a high-resolution precipitation analysis over Spain and Portugal. The model produces a realistic water table that we validate with hundreds of water table depth observation time series (ranging from 4 to 10 years) over the Iberian Peninsula. Modeled river flow is also compared to observations. Over shallow water table regions, results highlight the groundwater buffering effect on soil moisture fields over dry spells and long-term droughts, as well as the slow recovery of pre-drought soil wetness once climatic conditions turn wetter. Groundwater sustains river flow during dry summer periods. The longer lasting wet conditions in the soil when groundwater is considered increase summer evapotranspiration, that is mostly water-limited. Our results suggest that groundwater interaction with soil moisture should be considered for climate seasonal forecasting and climate studies in general over water-limited regions where shallow water tables are significantly present and connected to land surface hydrology.

Niche similarities among introduced and native mountain ungulates.

PubMed

Lowrey, B; Garrott, R A; McWhirter, D E; White, P J; DeCesare, N J; Stewart, S T

2018-03-24

The niche concept provides a strong foundation for theoretical and applied research among a broad range of disciplines. When two ecologically similar species are sympatric, theory predicts they will occupy distinct ecological niches to reduce competition. Capitalizing on the increasing availability of spatial data, we built from single species habitat suitability models to a multispecies evaluation of the niche partitioning hypothesis with sympatric mountain ungulates: native bighorn sheep (BHS; Ovis canadensis) and introduced mountain goats (MTG; Oreamnos americanus) in the northeast Greater Yellowstone Area. We characterized seasonal niches using two-stage resource selection functions with a used-available design and descriptive summaries of the niche attributes associated with used GPS locations. We evaluated seasonal similarity in niche space according to confidence interval overlap of model coefficients and similarity in geographic space by comparing model predicted values with Schoener's D metric. Our sample contained 37,962 summer locations from 53 individuals (BHS = 31, MTG = 22), and 79,984 winter locations from 57 individuals (BHS = 35, MTG = 22). Slope was the most influential niche component for both species and seasons, and showed the strongest evidence of niche partitioning. Bighorn sheep occurred on steeper slopes than mountain goats in summer and mountain goats occurred on steeper slopes in winter. The pattern of differential selection among species was less prevalent for the remaining covariates, indicating similarity in niche space. Model predictions in geographic space showed broad seasonal similarity (summer D = 0.88, winter D = 0.87), as did niche characterizations from used GPS locations. The striking similarities in seasonal niches suggest that introduced mountain goats will continue to increase their spatial overlap with native bighorn. Our results suggest that reducing densities of mountain goats in hunted areas where they are

High resolution reconstruction of monthly autumn and winter precipitation of Iberian Peninsula for last 150 years.

NASA Astrophysics Data System (ADS)

Cortesi, N.; Trigo, R.; González-Hidalgo, J. C.; Ramos, A.

2012-04-01

Precipitation over Iberian Peninsula (IP) presents large values of interannual variability and large spatial contrasts between wet mountainous regions in the north and dry regions in the southern plains. Unlike other European regions, IP was poorly monitored for precipitation during 19th century. Here we present a new approach to fill this gap. A set of 26 atmospheric circulation weather types (Trigo R.M. and DaCamara C.C., 2000) derived from a recent SLP dataset, the EMULATE (European and North Atlantic daily to multidecadal climate variability) Project, was used to reconstruct Iberian monthly precipitation from October to March during 1851-1947. Principal Component Regression Analysis was chosen to develop monthly precipitation reconstruction back to 1851 and calibrated over 1948-2003 period for 3030 monthly precipitation series of high-density homogenized MOPREDAS (Monthly Precipitation Database for Spain and Portugal) database. Validation was conducted over 1920-1947 at 15 key site locations. Results show high model performance for selected months, with a mean coefficient of variation (CV) around 0.6 during validation period. Lower CV values were achieved in western area of IP. Trigo, R. M., and DaCamara, C.C., 2000: "Circulation weather types and their impact on the precipitation regime in Portugal". Int. J. Climatol., 20, 1559-1581.

Time-lapse photography to monitor riparian meadow use

Treesearch

John W. Kinney; Warren P. Clary

1998-01-01

Riparian zones are key areas of most western landscapes. The kinds and amounts of natural and human activity occurring on these sites are often in dispute as many riparian areas in the mountain West are remote or have limited seasonal access. Impacts by wild ungulates, domestic livestock, or recreationists can result in relatively similar damages to streamside...

Paraglacial dynamics in Little Ice Age glaciated environments in the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Oliva, Marc; Serrano, Enrique; Ruiz-Fernández, Jesús; Gómez-Ortiz, Antonio; Palacios, David

2017-04-01

Three Iberian mountain ranges encompassed glaciers during the Little Ice Age (LIA): the Pyrenees, Cantabrian Mountains and Sierra Nevada. The gradual warming trend initiated during the second half of the XIX century promoted the progressive shrinking of these glaciers, which completely melted during the first half of the 20th century in the Cantabrian Mountains and Sierra Nevada and reduced by 80% of their LIA extent in the Pyrenees. Currently, the formerly glaciated environments are located within the periglacial belt and still present to a major or lesser degree signs of paraglacial activity. LIA moraines are devoid of vegetation and composed of highly unstable sediments that are being intensely mobilized by slope processes. Inside the moraines, different landforms and processes generated following LIA glacial retreat have generated: (i) buried ice trapped within rock debris supplied from the cirque walls, which has also generated rock glaciers and protalus lobes; (ii) semi-permanent snow fields distributed above the ice-patches remnants of the LIA glaciers, and (iii) small periglacial features such as frost mounds, sorted circles and solifluction landforms generated by processes such as solifluction and cryoturbation. Present-day morphodynamics is mostly related to seasonal frost conditions, though patches of permafrost have formed in some areas in contact with the buried ice. This 'geomorphic permafrost' is undergoing a process of degradation since it is not balanced with present-day climate conditions. This is reflected in the occurrence of multiple collapses and subsidences of the debris cover where the frozen bodies sit. In the highest areas of the Pyrenees there is a permafrost belt next to the small glaciated environments in the highest massifs. Finally, we propose a model for paraglacial activity in Iberian mountain ranges and compare it to other mid-latitude mountain environments as well as to other past deglaciation stages.

North Atlantic Oscillation and moisture transport towards the Iberian Peninsula during winter

NASA Astrophysics Data System (ADS)

Ordóñez, Paulina; Liberato, Margarida L. R.; Gouveia, Célia; Trigo, Ricardo M.

2013-04-01

The North Atlantic Oscillation (NAO) is the major source of interannual variability in winter precipitation over the Iberian Peninsula (IP). Recent works have identified the most important sources of moisture that supply the IP during different seasons of the year, including the nearby western Mediterranean and the tropical-subtropical North Atlantic corridor that extends from the Gulf of Mexico to the IP, and the IP itself (Gimeno et al., 2010). However, although rainfall is directly related to the moisture supply, the relationship between the water vapor transported towards IP and the NAO phase remains unclear. In this work the moisture transport towards IP was analyzed using a Lagrangian diagnosis method, which relies on the Lagrangian particle dispersion model FLEXPART. This methodology computes budgets of evaporation minus precipitation (E-P) by evaluating changes in the specific humidity along back-trajectories. Here we have computed (for each day) the evolution of moisture of the particles bound for Iberia up to 10 days prior to their arrival. The analysis was constrained to the winter (DJF) season, responsible for the largest fraction of precipitation, for the 20 years of ECMWF Reanalyses ERA40 dataset from 1980 to 2000. The contribution of the NAO phase on the water budgets is examined using composites of the obtained (E - P) fields for the 5 most extreme positive and negative NAO years of the study period. Results confirm that the IP is dominated by positive (negative) E-P anomalies during positive (negative) NAO phase. Additionally an anomalous water vapor sink (source) region located approximately over the Gulf Stream is found during positive (negative) NAO phase. Gimeno L., Nieto R., Trigo R.M. , Vicente-Serrano S.M, Lopes-Moreno J.I., (2010) "Where does the Iberian Peninsula moisture come from? An answer based on a Lagrangian approach". J. Hydrometeorology, 11, 421-436 DOI: 10.1175/2009JHM1182.1.

How landscape dynamics link individual- to population-level movement patterns: A multispecies comparison of ungulate relocation data

USGS Publications Warehouse

Mueller, Thomas; Olson, K.A.; Dressler, G.; Leimgruber, Peter; Fuller, Todd K.; Nicholson, Craig; Novaro, A.J.; Bolgeri, M.J.; Wattles, David W.; DeStefano, Stephen; Calabrese, J.M.; Fagan, William F.

2011-01-01

Aim  To demonstrate how the interrelations of individual movements form large-scale population-level movement patterns and how these patterns are associated with the underlying landscape dynamics by comparing ungulate movements across species.Locations  Arctic tundra in Alaska and Canada, temperate forests in Massachusetts, Patagonian Steppes in Argentina, Eastern Steppes in Mongolia.Methods  We used relocation data from four ungulate species (barren-ground caribou, Mongolian gazelle, guanaco and moose) to examine individual movements and the interrelation of movements among individuals. We applied and developed a suite of spatial metrics that measure variation in movement among individuals as population dispersion, movement coordination and realized mobility. Taken together, these metrics allowed us to quantify and distinguish among different large-scale population-level movement patterns such as migration, range residency and nomadism. We then related the population-level movement patterns to the underlying landscape vegetation dynamics via long-term remote sensing measurements of the temporal variability, spatial variability and unpredictability of vegetation productivity.Results  Moose, which remained in sedentary home ranges, and guanacos, which were partially migratory, exhibited relatively short annual movements associated with landscapes having very little broad-scale variability in vegetation. Caribou and gazelle performed extreme long-distance movements that were associated with broad-scale variability in vegetation productivity during the peak of the growing season. Caribou exhibited regular seasonal migration in which individuals were clustered for most of the year and exhibited coordinated movements. In contrast, gazelle were nomadic, as individuals were independently distributed and moved in an uncoordinated manner that relates to the comparatively unpredictable (yet broad-scale) vegetation dynamics of their landscape.Main conclusions�

How landscape dynamics link individual- to population-level movement patterns: A multispecies comparison of ungulate relocation data

USGS Publications Warehouse

Mueller, T.; Olson, K.A.; Dressler, G.; Leimgruber, P.; Fuller, T.K.; Nicolson, C.; Novaro, A.J.; Bolgeri, M.J.; Wattles, David W.; DeStefano, S.; Calabrese, J.M.; Fagan, W.F.

2011-01-01

Aim To demonstrate how the interrelations of individual movements form large-scale population-level movement patterns and how these patterns are associated with the underlying landscape dynamics by comparing ungulate movements across species. Locations Arctic tundra in Alaska and Canada, temperate forests in Massachusetts, Patagonian Steppes in Argentina, Eastern Steppes in Mongolia. Methods We used relocation data from four ungulate species (barren-ground caribou, Mongolian gazelle, guanaco and moose) to examine individual movements and the interrelation of movements among individuals. We applied and developed a suite of spatial metrics that measure variation in movement among individuals as population dispersion, movement coordination and realized mobility. Taken together, these metrics allowed us to quantify and distinguish among different large-scale population-level movement patterns such as migration, range residency and nomadism. We then related the population-level movement patterns to the underlying landscape vegetation dynamics via long-term remote sensing measurements of the temporal variability, spatial variability and unpredictability of vegetation productivity. Results Moose, which remained in sedentary home ranges, and guanacos, which were partially migratory, exhibited relatively short annual movements associated with landscapes having very little broad-scale variability in vegetation. Caribou and gazelle performed extreme long-distance movements that were associated with broad-scale variability in vegetation productivity during the peak of the growing season. Caribou exhibited regular seasonal migration in which individuals were clustered for most of the year and exhibited coordinated movements. In contrast, gazelle were nomadic, as individuals were independently distributed and moved in an uncoordinated manner that relates to the comparatively unpredictable (yet broad-scale) vegetation dynamics of their landscape. Main conclusions We show how

2nd Iberian Nuclear Astrophysics Meeting on Compact Stars

NASA Astrophysics Data System (ADS)

Perez-Garcia, M. Angeles; Pons, Jose; Albertus, C.

2012-02-01

ORGANIZING COMMITTEE Dr M Ángeles Pérez-García (Área Física Teórica-Universidad de Salamanca & IUFFYM) Dr J A Miralles (Universidad de Alicante) Dr J Pons (Universidad de Alicante) Dr C Albertus (Área Física Nuclear-Universidad de Salamanca & IUFFYM) Dr F Atrio (Área Física Teórica-Universidad de Salamanca & IUFFYM) PREFACE The second Iberian Nuclear Astrophysics meeting was held at the University of Salamanca, Spain on 22-23 September 2011. This volume contains most of the presentations delivered at this international workshop. This meeting was the second in the series following the previous I Encuentro Ibérico de Compstar, held at the University of Coimbra, Portugal in 2010. The main purpose of this meeting was to strengthen the scientific collaboration between the participants of the Iberian and the rest of the southern European branches of the European Nuclear Astrophysics network, formerly, COMPSTAR. This ESF (European Science Foundation) supported network has been crucial in helping to make a broader audience for the the most interesting and relevant research lines being developed currently in Nuclear Astrophysics, especially related to the physics of neutron stars. It is indeed important to emphasize the need for a collaborative approach to the rest of the scientific communities so that we can reach possible new members in this interdisciplinary area and as outreach for the general public. The program of the meeting was tailored to theoretical descriptions of the physics of neutron stars although some input from experimental observers and other condensed matter and optics areas of interest was also included. The main scientific topics included: Magnetic fields in compact stars Nuclear structure and in-medium effects in nuclear interaction Equation of state: from nuclear matter to quarks Importance of crust in the evolution of neutron stars Computational simulations of collapsing dense objects Observational phenomenology In particular, leading

Feasibility of use of fatty acid and triacylglycerol profiles for the authentication of commercial labelling in Iberian dry-cured sausages.

PubMed

Horcada, Alberto; Fernández-Cabanás, Víctor M; Polvillo, Oliva; Botella, Baltasar; Cubiles, M Dolores; Pino, Rafael; Narváez-Rivas, Mónica; León-Camacho, Manuel; Acuña, Rafael Rodríguez

2013-12-15

In the present study, fatty acid and triacylglycerol profiles were used to evaluate the possibility of authenticating Iberian dry-cured sausages according to their label specifications. 42 Commercial brand 'chorizo' and 39 commercial brand 'salchichón' sausages from Iberian pigs were purchased. 36 Samples were labelled Bellota and 45 bore the generic Ibérico label. In the market, Bellota is considered to be a better class than the generic Ibérico since products with the Bellota label are manufactured with high quality fat obtained from extensively reared pigs fed on acorns and pasture. Analyses of fatty acids and triacylglycerols were carried out by gas chromatography and a flame ion detector. A CP-SIL 88 column (highly substituted cyanopropyl phase; 50 m × 0.25 mm i.d., 0.2 µm film thickness) (Varian, Palo Alto, USA) was used for fatty acid analysis and a fused silica capillary DB-17HT column (50% phenyl-50% methylpolysiloxane; 30 m × 0.25 mm i.d., 0.15 µm film thickness) was used for triacylglycerols. Twelve fatty acids and 16 triacylglycerols were identified. Various discriminant models (linear quadratic discriminant analyses, logistic regression and support vector machines) were trained to predict the sample class (Bellota or Ibérico). These models included fatty acids and triacylglycerols separately and combined fatty acid and triacylglycerol profiles. The number of correctly classified samples according to discriminant analyses can be considered low (lower than 65%). The greatest discriminant rate was obtained when triacylglycerol profiles were included in the model, whilst using a combination of fatty acid and triacylglycerol profiles did not improve the rate of correct assignation. The values that represent the reliability of prediction of the samples according to the label specification were higher for the Ibérico class than for the Bellota class. In fact, quadratic and Support Vector Machine discriminate analyses were not able to assign the

Diet induced differences in carbon isotope fractionation between sirenians and terrestrial ungulates

USGS Publications Warehouse

Clementz, M.T.; Koch, P.L.; Beck, C.A.

2007-01-01

Carbon isotope differences (??13C) between bioapatite and diet, collagen and diet, and bioapatite and collagen were calculated for four species of sirenians, Dugong dugon (Mu??ller), Trichechus manatus (Linnaeus), Trichechus inunguis (Natterer), and the extinct Hydrodamalis gigas (Zimmerman). Bone and tooth samples were taken from archived materials collected from populations during the mid eighteenth century (H. gigas), between 1978 and 1984 (T. manatus, T. inunguis), and between 1997 and 1999 (D. dugon). Mean ??13C values were compared with those for terrestrial ungulates, carnivores, and six species of carnivorous marine mammals (cetaceans = 1; pinnipeds = 4; mustelids = 1). Significant differences in mean ??13C values among species for all tissue types were detected that separated species or populations foraging on freshwater plants or attached marine macroalgae (??13C values -4???; ??13Cbioapatite-diet ???11???). Likewise, ??13Cbioapatite-collagen values for freshwater and algal-foraging species (???7???) were greater than those for seagrass-foraging species (???5???). Variation in ??13C values calculated between tissues and between tissues and diet among species may relate to the nutritional composition of a species' diet and the extent and type of microbial fermentation that occurs during digestion of different types of plants. These results highlight the complications that can arise when making dietary interpretations without having first determined species-specific ??13Ctissue-diet values. ?? 2007 Springer-Verlag.

Distributional patterns of living ungulates (Mammalia: Cetartiodactyla and Perissodactyla) of the Neotropical region, the South American transition zone and Andean region

NASA Astrophysics Data System (ADS)

Absolon, Bruno Araujo; Gallo, Valéria; Avilla, Leonardo S.

2016-11-01

To recognize the distributional patterns of living ungulates in the Neotropical region, the South American transition zone, and Andean region using the panbiogeographical method of track analysis, and to attempt to correlate these patterns with geological history. The distribution of 24 species of living ungulates (in the families Camelidae, Cervidae, Tapiridae and Tayassuidae) was studied by the panbiogeographical method of track analysis. It was performed using distributional data acquired from literature and databases of scientific institutions. Individual tracks were obtained for each species by plotting locality records on maps and connecting them by minimum-spanning trees. Generalized tracks were determined from the spatial overlap between individual tracks, indicating a common history. The intersection between generalized tracks defined a biogeographic node, implying that these locations are biogeographic composites resulting from different ancestral biotas coming into spatial contact, possibly at different geologic times. The superposition of the 24 individual tracks resulted in five generalized tracks (GTs): GT1, Mesoamerican/Choco (composed of Mazama pandora, Mazama temama, Odoicoileus virginianus and Tapirus bairdii); GT2, Northern Andes (Mazama rufina, Pudu mephistophiles and Tapirus pinchaque); GT3, Central Andes (Hippocamelus antisensis, Lama guanicoe, Mazama chunyi and Vicugna vicugna); GT4, Chilean Patagonia (Hippocamelus bisulcus and Pudu puda); and GT5, Chaco/Central west Brazil (Blastocerus dichotomus, Catagonus wagneri and Ozotocerus bezoarticus). The biogeographic node was found in the Northwestern Colombia. The geological events such as tectonism and volcanism that occurred through the Neogene and mainly in the Pleistocene caused fragmentation, diversification and endemism of biota. The biogeographic node in Colombia occurred within a zone of convergence. This node emphasized the complexity of the area and it contains biotic elements with

Paleoenvironments and climatic changes in the Italian Peninsula during the Early Pleistocene: evidence from dental wear patterns of the ungulate community of Coste San Giacomo

NASA Astrophysics Data System (ADS)

Strani, Flavia; DeMiguel, Daniel; Sardella, Raffaele; Bellucci, Luca

2015-08-01

Quaternary glacial/interglacial alternations, influenced by orbital obliquity cycles with a 41-ka long periodicity, started in the northern hemisphere around 2.6 Ma ago. Such alternations affected the terrestrial ecosystems, especially those of the Mediterranean region, with changes in the floristic communities and the dispersal and radiation of a number of large mammal open dwellers. Analyses of tooth wear patterns of ungulates from the Early Pleistocene site of Coste San Giacomo allow for a more objective reconstruction on the paleoenvironments and the climate in the Italian Peninsula during this epoch. Our results show that this area was composed by a mosaic of biomes, in particular by steppe and woodlands/wetlands. Evidence of such heterogeneity is provided by the wide spectrum of feeding behaviours found among the numerous ungulate herbivores here recorded, with cervids (Axis cf. lyra, Croizetoceros cf. ramosus and Eucladoceros sp.) exhibiting browser diets, most of the bovids (Gazella borbonica and Leptobos sp. and Gallogoral meneghinii) being intermediate feeders and the equid Equus stenonis showing a strict grazer behaviour. These results provide new insights for a timing of changing ecosystems in Southern Europe and reveal the environmental legacy of this global climatic shift, which is essential for understanding the early occupation of Homo in Europe. Thus, our data provide new evidence that such an environmental heterogeneity and a wide spectrum of available food resources could have been the main factors favouring the settlement of early species of Homo in this area.

Genetic variation of the endangered Gentiana lutea L. var. aurantiaca (Gentianaceae) in populations from the Northwest Iberian Peninsula.

PubMed

González-López, Oscar; Polanco, Carlos; György, Zsuzsanna; Pedryc, Andrzej; Casquero, Pedro A

2014-06-05

Gentiana lutea L. (G. lutea L.) is an endangered plant, patchily distributed along the mountains of Central and Southern Europe. In this study, inter-simple sequence repeat (ISSR) markers were used to investigate the genetic variation in this species within and among populations of G. lutea L. var. aurantiaca of the Cantabrian Mountains (Northwest Iberian Peninsula). Samples of G. lutea L. collected at different locations of the Pyrenees and samples of G. lutea L. subsp. vardjanii of the Dolomites Alps were also analyzed for comparison. Using nine ISSR primers, 106 bands were generated, and 89.6% of those were polymorphic. The populations from the Northwest Iberian Peninsula were clustered in three different groups, with a significant correlation between genetic and geographic distances. Gentiana lutea L. var. aurantiaca showed 19.8% private loci and demonstrated a remarkable level of genetic variation, both among populations and within populations; those populations with the highest level of isolation show the lowest genetic variation within populations. The low number of individuals, as well as the observed genetic structure of the analyzed populations makes it necessary to protect them to ensure their survival before they are too small to persist naturally.

Genetic Variation of the Endangered Gentiana lutea L. var. aurantiaca (Gentianaceae) in Populations from the Northwest Iberian Peninsula

PubMed Central

González-López, Oscar; Polanco, Carlos; György, Zsuzsanna; Pedryc, Andrzej; Casquero, Pedro A.

2014-01-01

Gentiana lutea L. (G. lutea L.) is an endangered plant, patchily distributed along the mountains of Central and Southern Europe. In this study, inter-simple sequence repeat (ISSR) markers were used to investigate the genetic variation in this species within and among populations of G. lutea L. var. aurantiaca of the Cantabrian Mountains (Northwest Iberian Peninsula). Samples of G. lutea L. collected at different locations of the Pyrenees and samples of G. lutea L. subsp. vardjanii of the Dolomites Alps were also analyzed for comparison. Using nine ISSR primers, 106 bands were generated, and 89.6% of those were polymorphic. The populations from the Northwest Iberian Peninsula were clustered in three different groups, with a significant correlation between genetic and geographic distances. Gentiana lutea L. var. aurantiaca showed 19.8% private loci and demonstrated a remarkable level of genetic variation, both among populations and within populations; those populations with the highest level of isolation show the lowest genetic variation within populations. The low number of individuals, as well as the observed genetic structure of the analyzed populations makes it necessary to protect them to ensure their survival before they are too small to persist naturally. PMID:24905405

Dynamics of social behaviour at parturition in a gregarious ungulate.

PubMed

Pérez-Barbería, F J; Walker, D M

2018-05-01

Group living is the behavioural response that results when individuals assess the costs vs benefits of sociality, and these trade-offs vary across an animal's life. Here we quantitatively assess how periparturient condition (mother/non-mother) and births affect the dynamics of social interactions of a gregarious ungulate, and how such can help to explain evolutionary hypotheses of the mother-offspring bond. To achieve this we used data of the individual movement of a group of Scottish blackface sheep (Ovis aries) marked with GPS collars and properties of mathematical graphs (networks). Euclidean pair-wise distance between sheep were threshold at different percentiles to determine network links, and these thresholds have a profound effect on the connectivity of the resulting network. Births increased the average pair-wise distance between mothers, and between mothers and non-mothers, with less effect on the distance between non-mothers. Mothers occupied peripheral positions within the flock, more evident following births. Associations between individuals (i.e. network community change) were highly dynamic, though mothers were less likely to change community than non-mothers, especially after births. Births hampered individual communication within the flock (assessed via network closeness centrality), especially in mothers. Overall leadership (lead positioning relative to flock movement) was not associated to reproductive condition, and individual leadership rank was not affected by births. A ten minute GPS acquisition time was adequate to capture complex social dynamics in sheep movement. The results on mother's isolation behaviour support the hypotheses of selection for maternal imprint facilitation, reducing risks to nursing alien offspring, and group/multilevel selection on group formation. Copyright © 2018 Elsevier B.V. All rights reserved.

Animal tuberculosis maintenance at low abundance of suitable wildlife reservoir hosts: A case study in northern Spain.

PubMed

Gortázar, C; Fernández-Calle, L M; Collazos-Martínez, J A; Mínguez-González, O; Acevedo, P

2017-10-01

Animal tuberculosis (TB), which is caused by infection with members of the Mycobacterium tuberculosis complex (MTC), is a typical multi-host infection that flourishes at the livestock-wildlife interface. TB epidemiology is well characterized in the Mediterranean woodland habitats and Atlantic regions of southwestern Europe. However, much less is known about huge regions that do not form part of the two abovementioned settings, which have a low abundance of wild reservoirs. We hypothesized that MTC would be maintained in multi- rather than single-host communities in which wildlife would make a relatively low contribution to the maintenance of TB. Between 2011 and 2015, 7729 Eurasian wild boar (Sus scrofa) and 1729 wild ruminants were sampled for culture during hunting events on unfenced sites. In addition, 1058 wild ungulates were sampled on 23 fenced hunting estates. Infection prevalence data were modeled along with official data on cattle and goat TB, on livestock distribution and management, and on wild boar abundance. The mean individual MTC infection prevalence was 4.28% in wild boar, while the cattle skin test reactor percent was 0.17%. The prevalence of MTC infection in wild ungulates (mostly wild boar) from the fenced hunting estates was 11.6%. Modeling revealed that the main driver of TB in cattle was their management (beef; communal pastures). However, wild boar abundance, the prevalence of MTC infection in wild boar and the presence of fenced hunting estates also contributed to explaining cattle TB. The model used for goat TB identified communal pastures as a risk factor. The model for the prevalence of MTC infection in wild boar included wild boar abundance and communal pastures. We conclude that the MTC maintenance host community is most likely of a multi-host nature. While cattle and communal pastures pose the main risk regarding TB, it is also necessary to consider increasing wild boar densities and specific risks owing to fenced wildlife. We infer

Wild genius - domestic fool? Spatial learning abilities of wild and domestic guinea pigs.

PubMed

Lewejohann, Lars; Pickel, Thorsten; Sachser, Norbert; Kaiser, Sylvia

2010-03-25

Domestic animals and their wild relatives differ in a wide variety of aspects. The process of domestication of the domestic guinea pig (Cavia aperea f. porcellus), starting at least 4500 years ago, led to changes in the anatomy, physiology, and behaviour compared with their wild relative, the wild cavy, Cavia aperea. Although domestic guinea pigs are widely used as a laboratory animal, learning and memory capabilities are often disregarded as being very scarce. Even less is known about learning and memory of wild cavies. In this regard, one striking domestic trait is a reduction in relative brain size, which in the domesticated form of the guinea pig amounts to 13%. However, the common belief, that such a reduction of brain size in the course of domestication of different species is accomplished by less learning capabilities is not at all very well established in the literature. Indeed, domestic animals might also even outperform their wild conspecifics taking advantage of their adaptation to a man-made environment.In our study we compared the spatial learning abilities of wild and domestic guinea pigs. We expected that the two forms are different regarding their learning performance possibly related to the process of domestication. Therefore wild cavies as well as domestic guinea pigs of both sexes, aged 35 to 45 days, were tested in the Morris water maze to investigate their ability of spatial learning. Both, wild cavies and domestic guinea pigs were able to learn the task, proving the water maze to be a suitable test also for wild cavies. Regarding the speed of learning, male as well as female domestic guinea pigs outperformed their wild conspecifics significantly. Interestingly, only domestic guinea pigs showed a significant spatial association of the platform position, while other effective search strategies were used by wild cavies. The results demonstrate that domestic guinea pigs do not at all perform worse than their wild relatives in tests of spatial

Wild genius - domestic fool? Spatial learning abilities of wild and domestic guinea pigs

PubMed Central

2010-01-01

Background Domestic animals and their wild relatives differ in a wide variety of aspects. The process of domestication of the domestic guinea pig (Cavia aperea f. porcellus), starting at least 4500 years ago, led to changes in the anatomy, physiology, and behaviour compared with their wild relative, the wild cavy, Cavia aperea. Although domestic guinea pigs are widely used as a laboratory animal, learning and memory capabilities are often disregarded as being very scarce. Even less is known about learning and memory of wild cavies. In this regard, one striking domestic trait is a reduction in relative brain size, which in the domesticated form of the guinea pig amounts to 13%. However, the common belief, that such a reduction of brain size in the course of domestication of different species is accomplished by less learning capabilities is not at all very well established in the literature. Indeed, domestic animals might also even outperform their wild conspecifics taking advantage of their adaptation to a man-made environment. In our study we compared the spatial learning abilities of wild and domestic guinea pigs. We expected that the two forms are different regarding their learning performance possibly related to the process of domestication. Therefore wild cavies as well as domestic guinea pigs of both sexes, aged 35 to 45 days, were tested in the Morris water maze to investigate their ability of spatial learning. Results Both, wild cavies and domestic guinea pigs were able to learn the task, proving the water maze to be a suitable test also for wild cavies. Regarding the speed of learning, male as well as female domestic guinea pigs outperformed their wild conspecifics significantly. Interestingly, only domestic guinea pigs showed a significant spatial association of the platform position, while other effective search strategies were used by wild cavies. Conclusion The results demonstrate that domestic guinea pigs do not at all perform worse than their wild

Future Drought Projections over the Iberian Peninsula using Drought Indices

NASA Astrophysics Data System (ADS)

Garcia-Valdecasas Ojeda, M.; Yeste Donaire, P.; Góngora García, T. M.; Gámiz-Fortis, S. R.; Castro-Diez, Y.; Esteban-Parra, M. J.

2017-12-01

Currently, drought events are the cause of numerous annual economic losses. In a context of climate change, it is expected an increase in the severity and the frequency of drought occurrences, especially in areas such as the Mediterranean region. This study makes use of two drought indices in order to analyze the potential changes on future drought events and their effects at different time scales over a vulnerable region, the Iberian Peninsula. The indices selected were the Standardized Precipitation Evapotranspiration Index (SPEI), which takes into account the global warming through the temperature, and the Standardized Precipitation Index (SPI), based solely on precipitation data, at a spatial resolution of 0.088º ( 10 km). For their computation, current (1980-2014) and future (2021-2050 and 2071-2100) high resolution simulations were carried out using the Weather Research and Forecasting (WRF) model over a domain centered in the Iberian Peninsula, and nested in the 0.44 EUROCORDEX region. WRF simulations were driven by two different global bias-corrected climate models: the version 1 of NCAR's Community Earth System Model (CESM1) and the Max Planck Institute's Earth System Model (MPI-ESM-LR), and under two different Representative Concentration Pathway (RCP) scenarios: RCP 4.5 and RCP 8.5. Future projections were analyzed regarding to changes in mean, median and variance of drought indices with respect to the historical distribution, as well as changes in the frequency and duration of moderate and severe drought events. In general, results suggest an increase in frequency and severity of drought, especially for 2071-2100 period in the RCP 8.5 scenario. Results also shown an increase of drought phenomena more evident using the SPEI. Conclusions from this study could provide a valuable contribution to the understanding of how the increase of the temperature would affect the drought variability in the Mediterranean regions which is necessary for a suitable

Moisture balance over the Iberian Peninsula computed using a high resolution regional climate model. The impact of 3DVAR data assimilation.

NASA Astrophysics Data System (ADS)

González-Rojí, Santos J.; Sáenz, Jon; Ibarra-Berastegi, Gabriel

2016-04-01

A numerical downscaling exercise over the Iberian Peninsula has been run nesting the WRF model inside ERA Interim. The Iberian Peninsula has been covered by a 15km x 15 km grid with 51 vertical levels. Two model configurations have been tested in two experiments spanning the period 2010-2014 after a one year spin-up (2009). In both cases, the model uses high resolution daily-varying SST fields and the Noah land surface model. In the first experiment (N), after the model is initialised, boundary conditions drive the model, as usual in numerical downscaling experiments. The second experiment (D) is configured the same way as the N case, but 3DVAR data assimilation is run every six hours (00Z, 06Z, 12Z and 18Z) using observations obtained from the PREPBUFR dataset (NCEP ADP Global Upper Air and Surface Weather Observations) using a 120' window around analysis times. For the data assimilation experiment (D), seasonally (monthly) varying background error covariance matrices have been prepared according to the parameterisations used and the mesoscale model domain. For both N and D runs, the moisture balance of the model runs has been evaluated over the Iberian Peninsula, both internally according to the model results (moisture balance in the model) and also in terms of the observed moisture fields from observational datasets (particularly precipitable water and precipitation from observations). Verification has been performed both at the daily and monthly time scales. The verification has also been performed for ERA Interim, the driving coarse-scale dataset used to drive the regional model too. Results show that the leading terms that must be considered over the area are the tendency in the precipitable water column, the divergence of moisture flux, evaporation (computed from latent heat flux at the surface) and precipitation. In the case of ERA Interim, the divergence of Qc is also relevant, although still a minor player in the moisture balance. Both mesoscale model

A Powerful Antidote, a Strange Camel and Turkish Pepper: Iberian Science, the Discovery of the New World and the Early Modem Czech Lands.

PubMed

Cerna, Jana

2016-08-01

This article analyses the reception of knowledge about new world nature, and, more specifically, the reception of Iberian scientific knowledge of nature in the Americas, in the early modem Czech lands. It shows how the process of the reception of information about nature in the new world differed among the urban classes, intellectuals and the nobility; particular attention is paid to herbals, cosmographical works and travel reports. On the one hand, the study reveals that the efforts of Central European intellectuals to interpret new world nature were limited by the lack of necessary data and experience, which led to some misinterpretations and simplifications. On the other hand, it shows these Central European scholars to be fully-fledged members of an information network, whose works share many of the same characteristics as Iberian and, in general, early modem European science.

S-type granite generation and emplacement during a regional switch from extensional to contractional deformation (Central Iberian Zone, Iberian autochthonous domain, Variscan Orogeny)

NASA Astrophysics Data System (ADS)

Pereira, M. F.; Díez Fernández, R.; Gama, C.; Hofmann, M.; Gärtner, A.; Linnemann, U.

2018-01-01

Zircon grains extracted from S-type granites of the Mêda-Escalhão-Penedono Massif (Central Iberian Zone, Variscan Orogen) constrain the timing of emplacement and provide information about potential magma sources. Simple and composite zircon grains from three samples of S-type granite were analyzed by LA-ICP-MS. New U-Pb data indicate that granites crystallized in the Bashkirian (318.7 ± 4.8 Ma) overlapping the proposed age range of ca. 321-317 Ma of the nearby S-type granitic rocks of the Carrazeda de Anciães, Lamego and Ucanha-Vilar massifs. The timing of emplacement of such S-type granites seems to coincide with the waning stages of activity of a D2 extensional shear zone (i.e. Pinhel shear zone) developed in metamorphic conditions that reached partial melting and anatexis (ca. 321-317 Ma). Dykes of two-mica granites (resembling diatexite migmatite) are concordant and discordant to the compositional layering and S2 (main) foliation of the high-grade metamorphic rocks of the Pinhel shear zone. Much of the planar fabric in these dykes was formed during magmatic crystallization and subsequent solid-state deformation. Field relationships suggest contemporaneity between the ca. 319-317 Ma old magmatism of the study area and the switch from late D2 extensional deformation to early D3 contractional deformation. Inherited zircon cores are well preserved in these late D2-early D3 S-type granite plutons. U-Pb ages of inherited zircon cores range from ca. 2576 to ca. 421 Ma. The spectra of inherited cores overlap closely the range of detrital and magmatic zircon grains displayed by the Ediacaran to Silurian metasedimentary and metaigneous rocks of the Iberian autochthonous and parautochthonous domains. This is evidence of a genetic relationship between S-type granites and the host metamorphic rocks. There is no substantial evidence for the addition of mantle-derived material in the genesis of these late D2-early D3 S-type granitic rocks. The ɛNd arrays of heterogeneous

Inherited segmentation of the Iberian-African margins and tectonic reconstruction of a diffuse plate boundary.

NASA Astrophysics Data System (ADS)

Fernàndez, Manel; Torne, Montserrat; Vergés, Jaume; Casciello, Emilio

2016-04-01

Diffuse plate-boundary regions are characterized by non-well defined contacts between tectonic plates thus making difficult their reconstruction through time. The Western Mediterranean is one of these regions, where the convergence between the African and Iberian plates since Late Cretaceous resulted in the Betic-Rif arcuate orogen, the Gulf of Cadiz imbricate wedge, and the Alboran back-arc basin. Whereas the Iberia-Africa plate boundary is well defined west to the Gorringe Bank and along the Gloria Fault, it becomes much more diffuse eastwards with seismicity spreading over both the south-Iberian and north-African margins. Gravity data, when filtered for short wavelengths, show conspicuous positive Bouguer anomalies associated with the Gorringe Bank, the Gulf of Cadiz High and the Ronda/Beni-Bousera peridotitic massifs reflecting an inherited Jurassic margin segmentation. The subsequent Alpine convergence between Africa and Iberia reactivated these domains, producing crustal-scale thrusting in the Atlantic segments and eventually subduction in the proto-Mediterranean segments. The Jurassic segmentation of the Iberia-Africa margins substantiates the double-polarity subduction model proposed for the region characterized by a change from SE-dipping polarity in the Gorringe, Gulf of Cadiz and Betic-Rif domains, to NW-dipping polarity in the proto-Algerian domain. Therefore, the Algerian and Tyrrhenian basins in the east and the Alboran basin in the west are the result of SSE-E and NW-W retreating slabs of oceanic and/or hyper-extended Tethyan domains, respectively.

Weather Types, temperature and relief relationship in the Iberian Peninsula: A regional adiabatic processes under directional weather types

NASA Astrophysics Data System (ADS)

Peña Angulo, Dhais; Trigo, Ricardo; Cortesi, Nicola; Gonzalez-Hidalgo, Jose Carlos

2016-04-01

We have analyzed at monthly scale the spatial distribution of Pearson correlation between monthly mean of maximum (Tmax) and minimum (Tmin) temperatures with weather types (WTs) in the Iberian Peninsula (IP), represent them in a high spatial resolution grid (10km x 10km) from MOTEDAS dataset (Gonzalez-Hidalgo et al., 2015a). The WT classification was that developed by Jenkinson and Collison, adapted to the Iberian Peninsula by Trigo and DaCamara, using Sea Level Pressure data from NCAR/NCEP Reanalysis dataset (period 1951-2010). The spatial distribution of Pearson correlations shows a clear zonal gradient in Tmax under the zonal advection produced in westerly (W) and easterly (E) flows, with negative correlation in the coastland where the air mass come from but positive correlation to the inland areas. The same is true under North-West (NW), North-East (NE), South-West (SW) and South-East (SE) WTs. These spatial gradients are coherent with the spatial distribution of the main mountain chain and offer an example of regional adiabatic phenomena that affect the entire IP (Peña-Angulo et al., 2015b). These spatial gradients have not been observed in Tmin. We suggest that Tmin values are less sensitive to changes in Sea Level Pressure and more related to local factors. These directional WT present a monthly frequency over 10 days and could be a valuable tool for downscaling processes. González-Hidalgo J.C., Peña-Angulo D., Brunetti M., Cortesi, C. (2015a): MOTEDAS: a new monthly temperature database for mainland Spain and the trend in temperature (1951-2010). International Journal of Climatology 31, 715-731. DOI: 10.1002/joc.4298 Peña-Angulo, D., Trigo, R., Cortesi, C., González-Hidalgo, J.C. (2015b): The influence of weather types on the monthly average maximum and minimum temperatures in the Iberian Peninsula. Submitted to Hydrology and Earth System Sciences.

Cadomian magmatism and metamorphism at the Ossa Morena/Central Iberian zone boundary, Iberian Massif, Central Portugal: Geochemistry and P-T constraints of the Sardoal Complex

NASA Astrophysics Data System (ADS)

Henriques, S. B. A.; Neiva, A. M. R.; Tajčmanová, L.; Dunning, G. R.

2017-01-01

A well preserved Cadomian basement is exposed in the Iberian Massif, Central Portugal, at the Ossa Morena/Central Iberian zone boundary, which allows the determination of reliable geochemical data. A sequence of Cadomian and Variscan magmatic and tectonometamorphic events has been already described for this area and are documented in other areas of the Avalonian-Cadomian orogen. However, the geochemical information concerning the Cadomian basement for this area is still limited. We present whole rock geochemical and oxygen isotopic information to characterize the igneous protoliths of the Sardoal Complex, located within the Tomar-Badajoz-Córdoba Shear Zone, and identify their tectonic setting. We use detailed petrography, mineral chemistry and P-T data to characterize the final Cadomian tectonometamorphic event. The Sardoal Complex contains orthogneiss and amphibolite units. The protoliths of the orthogneiss are calc-alkaline magmas of acid composition and peraluminous character that were generated in an active continental margin in three different stages (ca. 692 Ma, ca. 569 Ma and ca. 548 Ma). The most significant processes in their petrogenesis are the partial melting of old metasedimentary and meta-igneous crust at different crustal levels and the crystal fractionation of plagioclase, alkali feldspars, apatite, zircon and Fe-Ti oxides. The protoliths of the amphibolite, older than ca. 540 Ma, are tholeiitic and calc-alkaline magmas of basic composition that display N-, T- and E-MORB affinities. They were generated in an active continental margin. Crustal contamination and fractional crystallization of hornblende and diopside were involved in their petrogenesis. However, the fractional crystallization was not significant. The magmatic activity recorded in the Sardoal Complex indicates the existence of a long-lived continental arc (ca. 692-540 Ma) with coeval felsic and mafic magmatism. The final stage of the Cadomian metamorphism is usually represented in other

Non-stationary influence of El Niño-Southern Oscillation and winter temperature on oak latewood growth in NW Iberian Peninsula.

PubMed

Rozas, Vicente; García-González, Ignacio

2012-09-01

The properties of El Niño-Southern Oscillation (ENSO), such as period, amplitude, and teleconnection strength to extratropical regions, have changed since the mid-1970s. ENSO affects the regional climatic regime in SW Europe, thus tree performance in the Iberian Peninsula could be affected by recent ENSO dynamics. We established four Quercus robur chronologies of earlywood and latewood widths in the NW Iberian Peninsula. The relationship between tree growth and the Southern Oscillation Index (SOI), the atmospheric expression of ENSO, showed that only latewood growth was correlated negatively with the SOI of the previous summer-autumn-winter. This relationship was non-stationary, with significant correlations only during the period 1952-1980; and also non-linear, with enhanced latewood growth only in La Niña years, i.e. years with a negative SOI index for the previous autumn. Non-linear relationship between latewood and SOI indicates an asymmetric influence of ENSO on tree performance, biassed towards negative SOI phases. During La Niña years, climate in the study area was warmer and wetter than during positive years, but only for 1952-1980. Winter temperatures became the most limiting factor for latewood growth since 1980, when mean regional temperatures increased by 1°C in comparison to previous periods. As a result, higher winter respiration rates, and the extension of the growing season, would probably cause an additional consumption of stored carbohydrates. The influence of ENSO and winter temperatures proved to be of great importance for tree growth, even at lower altitudes and under mild Atlantic climate in the NW Iberian Peninsula.

An initial study on the succession of sarcosaprophagous Diptera (Insecta) on carrion in the southeastern Iberian peninsula.

PubMed

Arnaldos, I; Romera, E; García, M D; Luna, A

2001-01-01

We present the results of the first study concerning Diptera carried out on the sarcosaprophagous fauna of southeastern Spain. This work represents the first attempt to describe dipteran sarcosaprophagous fauna in the Iberian peninsula, the seasonal succession, main features of the population dynamics and the main taxa useful for estimation of the post-mortem interval. The results of this study could be very useful for further forensic case work in the west Mediterranean area.

Analysis of aspen stand structure and composition in the Western U.S.: implications for management

Treesearch

J. D. Shaw

2004-01-01

Aspen communities in the western U.S. are considered at risk because of low levels of disturbance and high levels of herbivory by wild and domestic ungulates. There appears to be a trend toward the loss of aspen-dominated stands West-wide. In some cases the loss is caused by succession, with shade-tolerant conifers becoming dominant. On dry sites where aspen is...

Patterns of lesions of bovine tuberculosis in wild red deer and wild boar.

PubMed

Zanella, G; Duvauchelle, A; Hars, J; Moutou, F; Boschiroli, M L; Durand, B

2008-07-12

The data obtained from a survey of Mycobacterium bovis infection in wild red deer (Cervus elaphus) and wild boar (Sus scrofa) conducted in France in the 2005/06 hunting season were used to describe and quantify the pathological findings in the two species. The red deer had caseous abscessed lesions in their organs and lymph nodes, whereas in the wild boar the lesions were predominantly caseocalcareous and occurred mainly in the lymph nodes. The severity of the gross tuberculosis-like lesions was estimated on the basis of a numerical score. The significant difference between the distribution of the scores in the two species indicated that the disease was more serious in the red deer than in the wild boar. Unlike the red deer, the wild boar did not show a generalised pattern of disease. Among the lymph nodes examined systematically, gross lesions were most frequently observed in the mesenteric lymph nodes in the red deer and in the retropharyngeal lymph nodes in the wild boar. In both species, the presence of gross lesions showed the closest agreement with the isolation of M bovis from the same lymph nodes. The different patterns of the lesions of tuberculosis in the two species suggest that red deer might play an important role in the intraspecies and interspecies dissemination of the infection, whereas in wild boar the spread of the infection would be more likely to be restricted to other wild boar.

Is a wild mammal kept and reared in captivity still a wild animal?

PubMed

Künzl, Christine; Kaiser, Sylvia; Meier, Edda; Sachser, Norbert

2003-01-01

This study compared domestic guinea pigs (Cavia aperea f. porcellus; DGP) and two different populations of the wild cavy (Cavia aperea), its ancestor, to examine whether rearing of wild mammals in captivity affects their behavior and physiological stress responses. One population of wild cavies consisted of wild-trapped animals and their first laboratory-reared offspring (WGP-1). The animals of the other population were reared in captivity for about 30 generations (WGP-30). The spontaneous behavior of each of six groups of WGP-1 and WGP-30 and nine groups of DGP, each consisting of one adult male and two adult females, was analyzed quantitatively. Blood samples of the males were taken to determine cortisol, epinephrine, and norepinephrine concentrations. In addition, the exploratory behavior of 60-day-old male WGP-1, WGP-30, and DGP was investigated in an exploration apparatus. The domesticated animals displayed significantly less aggression, but significantly more sociopositive and male courtship behavior than their wild ancestors. In addition, DGP were much less attentive to their physical environment. Surprisingly, no behavioral difference was found between WGP-1 and WGP-30. Basal cortisol concentrations did not differ between wild and domestic guinea pigs. Catecholamine concentrations, however, as well as the challenge values of cortisol, were distinctly reduced in the DGP. WGP-1 and WGP-30 did not differ with respect to their endocrine stress responses. In the exploration apparatus both forms of wild cavies were much more explorative than the domestic animals. These data suggest that the long-term breeding and rearing of wild guinea pigs in captivity do not result in significant changes in behavior and hormonal stress responses. It appears to take much longer periods of time and artificial selection by humans to bring about characters of domestication in wild animals.

Cretaceous subduction in the Pyrenees: Iberian plate-kinematics in a mantle reference frame

NASA Astrophysics Data System (ADS)

Vissers, Reinoud; van Hinsbergen, Douwe; van der Meer, Douwe; Spakman, Wim

2016-04-01

During the Cretaceous, Iberia was a microplate separated from Laurasia and Gondwana by ridges and transforms, and by a convergent margin to its northeast along which the Pyrenean fold-thrust belt developed. As a microplate, Iberia underwent a well-defined but ill-understood Albian-Aptian ~ 35° counterclockwise rotation relative to Eurasia. Three competing kinematic scenarios for Iberian motion in the late Mesozoic are all compatible with the Pyrenean geological record and comprise (1) transtensional eastward motion of Iberia versus Eurasia, (2) strike-slip motion followed by orthogonal extension and (3) scissor-style opening of the Bay of Biscay coupled with subduction in the Pyrenean realm. The last scenario is the only one consistent with paleomagnetic and ocean floor anomaly constraints showing Iberia's rotation, but is criticized because the upper mantle below the Pyrenees contains no evidence for a subducted slab. Here we show that when taking absolute plate motions into account, Aptian oceanic subduction in the Pyrenees followed by Albian slab break-off should leave a slab remnant in the present-day mid-mantle below NW Africa instead of below the Pyrenees. Mantle tomography shows a positive seismic velocity anomaly that matches the predicted position and dimension of such a slab remnant between 1900 and 1500 km depth below Reggane in Southern Algeria. Seismic tomographic imaging of the mantle structure therefore does not falsify the Pyrenean subduction hypothesis, and provides no basis to discard marine magnetic and paleomagnetic constraints on Iberia's kinematic history. Slab break-off explains the well-dated Albian-Cenomanian high-temperature metamorphism in the Pyrenees that hitherto has been interpreted as an expression of continental break-up and hyperextension. We suspect that subduction in the Pyrenees may have played a key role in driving the rapid Aptian rotation of the Iberian microplate.

An indicator approach to capture impacts of white-tailed deer and other ungulates in the presence of multiple associated stressors.

PubMed

Blossey, Bernd; Dávalos, Andrea; Nuzzo, Victoria

2017-09-01

Management of ungulates is contested ground that lacks stakeholder agreement on desirable population sizes and management approaches. Unfortunately, we often miss information about extent of local impacts, for example on plant communities, to guide management decisions. Typical vegetation impact assessments like the woody browse index do not assess herbaceous plants, and differences in browse severity can be a function of deer density, deer legacy effects, localized deer feeding preferences and/or differences in plant community composition. Furthermore, in heavily affected areas, few remnant plants may remain for assessments. We used a sentinel approach to assess impact of white-tailed deer ( Odocoileus virginianus ), rodent attack, invasive earthworms and three invasive plants on survival and growth of 3-month-old red oak ( Quercus rubra ) individuals. We planted cohorts in 2010 and 2011 into deer accessible and fenced 30 × 30 m plots at 12 forests in New York State. We found year and site-specific effects with high deer herbivory of unprotected individuals (70-90 % of oaks browsed by deer versus none in fenced areas) far exceeding importance of rodent attacks. Oaks planted at low earthworm density sites were at significantly higher risk of being browsed compared with oaks at high earthworm density sites, but there was no detectable negative effect of invasive plants. Surviving oaks grew (~2 cm per year) under forest canopy cover, but only when fenced. We consider planting of oak or other woody or herbaceous sentinels to assess deer browse pressure a promising method to provide quantifiable evidence for deer impacts and to gauge success of different management techniques. The strength of this approach is that typical problems associated with multiple stressor impacts can be avoided, areas devoid of forest floor vegetation but under heavy deer browse pressure can still be assessed and the method can be implemented by non-specialists. Implementation of regular

An indicator approach to capture impacts of white-tailed deer and other ungulates in the presence of multiple associated stressors

PubMed Central

Dávalos, Andrea; Nuzzo, Victoria

2017-01-01

Abstract Management of ungulates is contested ground that lacks stakeholder agreement on desirable population sizes and management approaches. Unfortunately, we often miss information about extent of local impacts, for example on plant communities, to guide management decisions. Typical vegetation impact assessments like the woody browse index do not assess herbaceous plants, and differences in browse severity can be a function of deer density, deer legacy effects, localized deer feeding preferences and/or differences in plant community composition. Furthermore, in heavily affected areas, few remnant plants may remain for assessments. We used a sentinel approach to assess impact of white-tailed deer (Odocoileus virginianus), rodent attack, invasive earthworms and three invasive plants on survival and growth of 3-month-old red oak (Quercus rubra) individuals. We planted cohorts in 2010 and 2011 into deer accessible and fenced 30 × 30 m plots at 12 forests in New York State. We found year and site-specific effects with high deer herbivory of unprotected individuals (70–90 % of oaks browsed by deer versus none in fenced areas) far exceeding importance of rodent attacks. Oaks planted at low earthworm density sites were at significantly higher risk of being browsed compared with oaks at high earthworm density sites, but there was no detectable negative effect of invasive plants. Surviving oaks grew (~2 cm per year) under forest canopy cover, but only when fenced. We consider planting of oak or other woody or herbaceous sentinels to assess deer browse pressure a promising method to provide quantifiable evidence for deer impacts and to gauge success of different management techniques. The strength of this approach is that typical problems associated with multiple stressor impacts can be avoided, areas devoid of forest floor vegetation but under heavy deer browse pressure can still be assessed and the method can be implemented by non-specialists. Implementation of