Sample records for identification origin effect

  1. Geographic origin and individual assignment of Shorea platyclados (Dipterocarpaceae) for forensic identification

    PubMed Central

    Diway, Bibian; Khoo, Eyen

    2017-01-01

    The development of timber tracking methods based on genetic markers can provide scientific evidence to verify the origin of timber products and fulfill the growing requirement for sustainable forestry practices. In this study, the origin of an important Dark Red Meranti wood, Shorea platyclados, was studied by using the combination of seven chloroplast DNA and 15 short tandem repeats (STRs) markers. A total of 27 natural populations of S. platyclados were sampled throughout Malaysia to establish population level and individual level identification databases. A haplotype map was generated from chloroplast DNA sequencing for population identification, resulting in 29 multilocus haplotypes, based on 39 informative intraspecific variable sites. Subsequently, a DNA profiling database was developed from 15 STRs allowing for individual identification in Malaysia. Cluster analysis divided the 27 populations into two genetic clusters, corresponding to the region of Eastern and Western Malaysia. The conservativeness tests showed that the Malaysia database is conservative after removal of bias from population subdivision and sampling effects. Independent self-assignment tests correctly assigned individuals to the database in an overall 60.60−94.95% of cases for identified populations, and in 98.99−99.23% of cases for identified regions. Both the chloroplast DNA database and the STRs appear to be useful for tracking timber originating in Malaysia. Hence, this DNA-based method could serve as an effective addition tool to the existing forensic timber identification system for ensuring the sustainably management of this species into the future. PMID:28430826

  2. 19 CFR 102.23 - Origin and Manufacturer Identification

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ...; DEPARTMENT OF THE TREASURY RULES OF ORIGIN Rules of Origin § 102.23 Origin and Manufacturer Identification (a... 19 Customs Duties 1 2010-04-01 2010-04-01 false Origin and Manufacturer Identification 102.23... address of the entity performing the origin-conferring operations pursuant to § 102.21 or § 102.22, as...

  3. Transformational Leadership, Transactional Contingent Reward, and Organizational Identification: The Mediating Effect of Perceived Innovation and Goal Culture Orientations.

    PubMed

    Xenikou, Athena

    2017-01-01

    Purpose: The aim of this research was to investigate the effect of transformational leadership and transactional contingent reward as complementary, but distinct, forms of leadership on facets of organizational identification via the perception of innovation and goal organizational values. Design/Methodology/Approach: Three studies were carried out implementing either a measurement of mediation or experimental-causal-chain design to test for the hypothesized effects. Findings: The measurement of mediation study showed that transformational leadership had a positive direct and indirect effect, via innovation value orientation, on cognitive identification, whereas transactional contingent reward was more strongly related to affective, rather than cognitive, identification, and goal orientation was a mediator of their link. The findings of the two experimental-causal-chain studies further supported the hypothesized effects. Transformational leadership was found to lead subordinates to perceive the culture as more innovative compared to transactional contingent reward, whereas transactional contingent reward led employees to perceive the culture as more goal, than innovation, oriented. Finally, innovation, compared to goal, value orientation increased cognitive identification, while goal orientation facilitated affective, rather than cognitive, identification. Implications: The practical implications involve the development of strategies organizations can apply, such as leadership training programs, to strengthen their ties with their employees, which, in turn, may have a positive impact on in-role, as well as extra-role, behaviors. Originality/Value: The originality of this research concerns the identification of distinct mechanisms explaining the effect of transformational leadership and transactional contingent reward on cognitive and affective identification applying an organizational culture perspective and a combination of measurement and causal mediation designs.

  4. Transformational Leadership, Transactional Contingent Reward, and Organizational Identification: The Mediating Effect of Perceived Innovation and Goal Culture Orientations

    PubMed Central

    Xenikou, Athena

    2017-01-01

    Purpose: The aim of this research was to investigate the effect of transformational leadership and transactional contingent reward as complementary, but distinct, forms of leadership on facets of organizational identification via the perception of innovation and goal organizational values. Design/Methodology/Approach: Three studies were carried out implementing either a measurement of mediation or experimental-causal-chain design to test for the hypothesized effects. Findings: The measurement of mediation study showed that transformational leadership had a positive direct and indirect effect, via innovation value orientation, on cognitive identification, whereas transactional contingent reward was more strongly related to affective, rather than cognitive, identification, and goal orientation was a mediator of their link. The findings of the two experimental-causal-chain studies further supported the hypothesized effects. Transformational leadership was found to lead subordinates to perceive the culture as more innovative compared to transactional contingent reward, whereas transactional contingent reward led employees to perceive the culture as more goal, than innovation, oriented. Finally, innovation, compared to goal, value orientation increased cognitive identification, while goal orientation facilitated affective, rather than cognitive, identification. Implications: The practical implications involve the development of strategies organizations can apply, such as leadership training programs, to strengthen their ties with their employees, which, in turn, may have a positive impact on in-role, as well as extra-role, behaviors. Originality/Value: The originality of this research concerns the identification of distinct mechanisms explaining the effect of transformational leadership and transactional contingent reward on cognitive and affective identification applying an organizational culture perspective and a combination of measurement and causal mediation designs. PMID:29093688

  5. 40 CFR 52.2921 - Original identification of plan.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 4 2010-07-01 2010-07-01 false Original identification of plan. 52.2921 Section 52.2921 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS... Mariana Islands § 52.2921 Original identification of plan. (a) This section identified the original...

  6. 40 CFR 52.2673 - Original identification of plan.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 4 2010-07-01 2010-07-01 false Original identification of plan. 52... (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Guam § 52.2673 Original identification of plan. (a) This section identified the original “Implementation Plan for Compliance With the...

  7. 40 CFR 52.2823 - Original identification of plan.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 4 2010-07-01 2010-07-01 false Original identification of plan. 52... (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) American Samoa § 52.2823 Original identification of plan. (a) This section identified the original “Implementation Plan for Compliance With the...

  8. 40 CFR 52.2186 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 4 2010-07-01 2010-07-01 false Original identification of plan section. 52.2186 Section 52.2186 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR... Original identification of plan section. (a) This section identifies the original “Air Implementation Plan...

  9. 40 CFR 52.1281 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 4 2010-07-01 2010-07-01 false Original identification of plan section. 52.1281 Section 52.1281 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR... Original identification of plan section. (a) This section identifies the original “Air Implementation Plan...

  10. 40 CFR 52.1426 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 4 2011-07-01 2011-07-01 false Original identification of plan section... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Nebraska § 52.1426 Original identification of plan section. (a) This section identifies the original “Nebraska Air Quality...

  11. 40 CFR 52.1426 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 4 2014-07-01 2014-07-01 false Original identification of plan section... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Nebraska § 52.1426 Original identification of plan section. (a) This section identifies the original “Nebraska Air Quality...

  12. 40 CFR 52.1426 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 4 2012-07-01 2012-07-01 false Original identification of plan section... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Nebraska § 52.1426 Original identification of plan section. (a) This section identifies the original “Nebraska Air Quality...

  13. 40 CFR 52.622 - Original identification of plan.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 3 2010-07-01 2010-07-01 false Original identification of plan. 52.622... (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Hawaii § 52.622 Original identification of plan. (a) This section identified the original “State of Hawaii Air Pollution Control Implementation Plan...

  14. 40 CFR 52.2465 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 5 2012-07-01 2012-07-01 false Original identification of plan section. 52.2465 Section 52.2465 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Virginia § 52.2465 Original identification of plan section. (a)...

  15. 40 CFR 52.2465 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 5 2013-07-01 2013-07-01 false Original identification of plan section. 52.2465 Section 52.2465 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Virginia § 52.2465 Original identification of plan section. (a)...

  16. [A new herbs traceability method based on DNA barcoding-origin-morphology analysis--an example from an adulterant of 'Heiguogouqi'].

    PubMed

    Gu, Xuan; Zhang, Xiao-qin; Song, Xiao-na; Zang, Yi-mei; Li Yan-peng; Ma, Chang-hua; Zhao, Bai-xiao; Liu, Chun-sheng

    2014-12-01

    The fruit of Lycium ruthenicum is a common folk medicine in China. Now it is popular for its antioxidative effect and other medical functions. The adulterants of the herb confuse consumers. In order to identify a new adulterant of L. ruthenicum, a research was performed based on NCBI Nucleotide Database ITS Sequence, combined analysis of the origin and morphology of the adulterant to traceable varieties. Total genomic DNA was isolated from the materials, and nuclear DNA ITS sequences were amplified and sequenced; DNA fragments were collated and matched by using ContingExpress. Similarity identification of BLAST analysis was performed. Besides, the distribution of plant origin and morphology were considered to further identification and verification. Families and genera were identified by molecular identification method. The adulterant was identified as plant belonging to Berberis. Origin analysis narrowed the range of sample identification. Seven different kinds of plants in Berberis were potential sources of the sample. Adulterants variety was traced by morphological analysis. The united molecular identification-origin-morphology research proves to be a preceding way to medical herbs traceability with time-saving and economic advantages and the results showed the new adulterant of L. ruthenicum was B. kaschgarica. The main differences between B. kaschgarica and L. ruthenicum are as follows: in terms of the traits, the surface of B. kaschgarica is smooth and crispy, and that of L. ruthenicum is shrinkage, solid and hard. In microscopic characteristics, epicarp cells of B. aschgarica thickening like a string of beads, stone cells as the rectangle, and the stone cell walls of L. ruthenicum is wavy, obvious grain layer. In molecular sequences, the length of ITS sequence of B. kaschgarica is 606 bp, L. ruthenicum is 654 bp, the similarity of the two sequences is 53.32%.

  17. Development of an improved rapid BACpro® protocol and a method for direct identification from blood-culture-positive bottles using matrix-assisted laser desorption ionization time-of-flight mass spectrometry.

    PubMed

    Yonezawa, Takatoshi; Watari, Tomohisa; Ashizawa, Kazuho; Hanada, Daisuke; Yanagiya, Takako; Watanabe, Naoki; Terada, Takashi; Tomoda, Yutaka; Fujii, Satoshi

    2018-05-01

    Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been incorporated into pathogenic bacterial identification methods and has improved their rapidity. Various methods have been reported to directly identify bacteria with MALDI-TOF MS by pretreating culture medium in blood culture bottles. Rapid BACpro® (Nittobo Medical Co., Ltd.) is a pretreatment kit for effective collection of bacteria with cationic copolymers. However, the Rapid BACpro® pretreatment kit is adapted only for MALDI Biotyper (Bruker Daltonics K.K.), and there has been a desire to expand its use to VITEK MS (VMS; bioMerieux SA). We improved the protocol and made it possible to analyze with VMS. The culture medium bacteria collection method was changed to a method with centrifugation after hemolysis using saponin; the cationic copolymer concentration was changed to 30% of the original concentration; the sequence with which reagents were added was changed; and a change was made to an ethanol/formic acid extraction method. The improved protocol enhanced the identification performance. When VMS was used, the identification rate was 100% with control samples. With clinical samples, the identification agreement rate with the cell smear method was 96.3%. The improved protocol is effective in blood culture rapid identification, being both simpler and having an improved identification performance compared with the original. Copyright © 2018 Elsevier B.V. All rights reserved.

  18. Holistic face processing can inhibit recognition of forensic facial composites.

    PubMed

    McIntyre, Alex H; Hancock, Peter J B; Frowd, Charlie D; Langton, Stephen R H

    2016-04-01

    Facial composite systems help eyewitnesses to show the appearance of criminals. However, likenesses created by unfamiliar witnesses will not be completely accurate, and people familiar with the target can find them difficult to identify. Faces are processed holistically; we explore whether this impairs identification of inaccurate composite images and whether recognition can be improved. In Experiment 1 (n = 64) an imaging technique was used to make composites of celebrity faces more accurate and identification was contrasted with the original composite images. Corrected composites were better recognized, confirming that errors in production of the likenesses impair identification. The influence of holistic face processing was explored by misaligning the top and bottom parts of the composites (cf. Young, Hellawell, & Hay, 1987). Misalignment impaired recognition of corrected composites but identification of the original, inaccurate composites significantly improved. This effect was replicated with facial composites of noncelebrities in Experiment 2 (n = 57). We conclude that, like real faces, facial composites are processed holistically: recognition is impaired because unlike real faces, composites contain inaccuracies and holistic face processing makes it difficult to perceive identifiable features. This effect was consistent across composites of celebrities and composites of people who are personally familiar. Our findings suggest that identification of forensic facial composites can be enhanced by presenting composites in a misaligned format. (c) 2016 APA, all rights reserved).

  19. Improving substructure identification accuracy of shear structures using virtual control system

    NASA Astrophysics Data System (ADS)

    Zhang, Dongyu; Yang, Yang; Wang, Tingqiang; Li, Hui

    2018-02-01

    Substructure identification is a powerful tool to identify the parameters of a complex structure. Previously, the authors developed an inductive substructure identification method for shear structures. The identification error analysis showed that the identification accuracy of this method is significantly influenced by the magnitudes of two key structural responses near a certain frequency; if these responses are unfavorable, the method cannot provide accurate estimation results. In this paper, a novel method is proposed to improve the substructure identification accuracy by introducing a virtual control system (VCS) into the structure. A virtual control system is a self-balanced system, which consists of some control devices and a set of self-balanced forces. The self-balanced forces counterbalance the forces that the control devices apply on the structure. The control devices are combined with the structure to form a controlled structure used to replace the original structure in the substructure identification; and the self-balance forces are treated as known external excitations to the controlled structure. By optimally tuning the VCS’s parameters, the dynamic characteristics of the controlled structure can be changed such that the original structural responses become more favorable for the substructure identification and, thus, the identification accuracy is improved. A numerical example of 6-story shear structure is utilized to verify the effectiveness of the VCS based controlled substructure identification method. Finally, shake table tests are conducted on a 3-story structural model to verify the efficacy of the VCS to enhance the identification accuracy of the structural parameters.

  20. Intrinsic and extrinsic motives for originally following a sport team and team identification.

    PubMed

    Wann, D L; Ensor, C L; Bilyeu, J K

    2001-10-01

    Research indicates that both highly and lowly identified fans are more likely to be intrinsically than extrinsically motivated and that highly identified fans have a particularly strong inclination for intrinsic motivation. The current investigation was designed to extend this work by examining the relationship between level of identification and one's intrinsic and extrinsic motives for originally following a sport team. Preference for intrinsic motives for originally following a team should be highest among those high on team identification. 88 participants completed questionnaires containing the Sport Spectator Identification Scale and items assessing their intrinsic and extrinsic motives for originally identifying with a team. Analyses provided clear support for the hypotheses.

  1. The effectiveness of vane-aileron excitation in the experimental determination of flutter speed by parameter identification

    NASA Technical Reports Server (NTRS)

    Nissim, Eli

    1990-01-01

    The effectiveness of aerodynamic excitation is evaluated analytically in conjunction with the experimental determination of flutter dynamic pressure by parameter identification. Existing control surfaces were used, with an additional vane located at the wingtip. The equations leading to the identification of the equations of motion were reformulated to accommodate excitation forces of aerodynamic origin. The aerodynamic coefficients of the excitation forces do not need to be known since they are determined by the identification procedure. The 12 degree-of-freedom numerical example treated in this work revealed the best wingtip vane locations, and demonstrated the effectiveness of the aileron-vane excitation system. Results from simulated data gathered at much lower dynamic pressures (approximately half the value of flutter dynamic pressure) predicted flutter dynamic pressures with 2-percent errors.

  2. 40 CFR 52.677 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Idaho § 52.677 Original identification of plan section. (a) This section identifies the original “Idaho Air Quality Implementation Plan” and all revisions submitted by Idaho that were federally approved prior to November 12, 2004. (b) The...

  3. 40 CFR 52.677 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Idaho § 52.677 Original identification of plan section. (a) This section identifies the original “Idaho Air Quality Implementation Plan” and all revisions submitted by Idaho that were federally approved prior to November 12, 2004. (b) The...

  4. 40 CFR 52.677 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Idaho § 52.677 Original identification of plan section. (a) This section identifies the original “Idaho Air Quality Implementation Plan” and all revisions submitted by Idaho that were federally approved prior to November 12, 2004. (b) The...

  5. 40 CFR 52.677 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Idaho § 52.677 Original identification of plan section. (a) This section identifies the original “Idaho Air Quality Implementation Plan” and all revisions submitted by Idaho that were federally approved prior to November 12, 2004. (b) The...

  6. 40 CFR 52.2134 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... for ozone nonattainment areas, PSD NOX increment regulations, and regulations listing the definition..., paragraph 4; covering PSD. These regulations were effective August 24, 1990, and submitted September 18... 4 covering PSD. These regulations were effective June 26, 1992, and submitted July 23, 1992. (ii...

  7. 40 CFR 52.2134 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... for ozone nonattainment areas, PSD NOX increment regulations, and regulations listing the definition..., paragraph 4; covering PSD. These regulations were effective August 24, 1990, and submitted September 18... 4 covering PSD. These regulations were effective June 26, 1992, and submitted July 23, 1992. (ii...

  8. 40 CFR 52.2134 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... for ozone nonattainment areas, PSD NOX increment regulations, and regulations listing the definition..., paragraph 4; covering PSD. These regulations were effective August 24, 1990, and submitted September 18... 4 covering PSD. These regulations were effective June 26, 1992, and submitted July 23, 1992. (ii...

  9. 40 CFR 52.2134 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... for ozone nonattainment areas, PSD NOX increment regulations, and regulations listing the definition..., paragraph 4; covering PSD. These regulations were effective August 24, 1990, and submitted September 18... 4 covering PSD. These regulations were effective June 26, 1992, and submitted July 23, 1992. (ii...

  10. 40 CFR 52.2239 - Original Identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Original Identification of plan section. (a) This section identifies the original “Tennessee Air Pollution... on February 3, 1972, by the Division of Air Pollution Control of the Tennessee Department of Public... Division of Air Pollution Control of the Tennessee Department of Public Health. (3) Statements of intent...

  11. Identification of the Species of Origin for Meat Products by Rapid Evaporative Ionization Mass Spectrometry.

    PubMed

    Balog, Julia; Perenyi, Dora; Guallar-Hoyas, Cristina; Egri, Attila; Pringle, Steven D; Stead, Sara; Chevallier, Olivier P; Elliott, Chris T; Takats, Zoltan

    2016-06-15

    Increasingly abundant food fraud cases have brought food authenticity and safety into major focus. This study presents a fast and effective way to identify meat products using rapid evaporative ionization mass spectrometry (REIMS). The experimental setup was demonstrated to be able to record a mass spectrometric profile of meat specimens in a time frame of <5 s. A multivariate statistical algorithm was developed and successfully tested for the identification of animal tissue with different anatomical origin, breed, and species with 100% accuracy at species and 97% accuracy at breed level. Detection of the presence of meat originating from a different species (horse, cattle, and venison) has also been demonstrated with high accuracy using mixed patties with a 5% detection limit. REIMS technology was found to be a promising tool in food safety applications providing a reliable and simple method for the rapid characterization of food products.

  12. Identification of Medicinal Mugua Origin by Near Infrared Spectroscopy Combined with Partial Least-squares Discriminant Analysis.

    PubMed

    Han, Bangxing; Peng, Huasheng; Yan, Hui

    2016-01-01

    Mugua is a common Chinese herbal medicine. There are three main medicinal origin places in China, Xuancheng City Anhui Province, Qijiang District Chongqing City, Yichang City, Hubei Province, and suitable for food origin places Linyi City Shandong Province. To construct a qualitative analytical method to identify the origin of medicinal Mugua by near infrared spectroscopy (NIRS). Partial least squares discriminant analysis (PLSDA) model was established after the Mugua derived from five different origins were preprocessed by the original spectrum. Moreover, the hierarchical cluster analysis was performed. The result showed that PLSDA model was established. According to the relationship of the origins-related important score and wavenumber, and K-mean cluster analysis, the Muguas derived from different origins were effectively identified. NIRS technology can quickly and accurately identify the origin of Mugua, provide a new method and technology for the identification of Chinese medicinal materials. After preprocessed by D1+autoscale, more peaks were increased in the preprocessed Mugua in the near infrared spectrumFive latent variable scores could reflect the information related to the origin place of MuguaOrigins of Mugua were well-distinguished according to K. mean value clustering analysis. Abbreviations used: TCM: Traditional Chinese Medicine, NIRS: Near infrared spectroscopy, SG: Savitzky-Golay smoothness, D1: First derivative, D2: Second derivative, SNV: Standard normal variable transformation, MSC: Multiplicative scatter correction, PLSDA: Partial least squares discriminant analysis, LV: Latent variable, VIP scores: Important score.

  13. The Role of Clear Sky Identification in the Study of Cloud Radiative Effects: Combine Analysis from ISCCP and the Scanner of Radiation Budget (ScaRaB)

    NASA Technical Reports Server (NTRS)

    Rossow, W. B.; Stubenrauch, C. J.; Briand, V.; Hansen, James E. (Technical Monitor)

    2001-01-01

    Since the effect of clouds on the earth's radiation balance is often estimated as the difference of net radiative fluxes at the top of the atmosphere between all situations and monthly averaged clear sky situations of the same regions, a reliable identification of clear sky is important for the study of cloud radiative effects. The Scanner for Radiation Balance (ScaRaB) radiometer on board the Russian Meteor-3/7 satellite provided earth radiation budget observations from March 1994 to February 1995 with two ERBE-Re broad-band longwave and shortwave channels. Two narrow-band channels, in the infrared atmospheric window and in the visible band, have been added to the ScaRaB instrument to improve the cloud scene identification. The International Satellite Cloud Climatology Project (ISCCP) method for cloud detection and determination of cloud and surface properties uses the same narrow-band channels as ScaRaB, but is employed to a collection of measurements at a better spatial resolution of about 5 km. By applying the original ISCCP algorithms to the ScaRaB data, the clear sky frequency is about 5% lower than the one over quasi-simultaneous original ISCCP data, an indication that the ISCCP cloud detection is quite stable. However, one would expect an about 10 to 20% smaller clear sky occurrence over the larger ScaRaB pixels. Adapting the ISCCP algorithms to the reduced spatial resolution of 60 km and to the different time sampling of the ScaRaB data leads therefore to a reduction of a residual cloud contamination. A sensitivity study with time-space collocated ScaRaB and original ISCCP data at a spatial resolution of 1deg longitude x 1deg latitude shows that the effect of clear sky identification method plays a higher role on the clear sky frequency and therefore on the statistics than on the zonal mean values of the clear sky fluxes. Nevertheless, the zonal outgoing longwave fluxes corresponding to ERBE clear sky are in general about 2 to 10 W/sq m higher than those obtained from the ScaRaB adapted ISCCP clear sky identifications. The latter are close to (about 1 W/sq m higher) fluxes corresponding to clear sky regions from original ISCCP data, whereas ScaRaB clear sky LW fluxes obtained with the original ISCCP identification lie about 1 to 2 W/sq m below. Especially in the tropics where water vapor abundance is high, the ERBE clear sky LW fluxes seem to be systematically overestimated by about 4 W/sq m, and SW fluxes are lower by about 5 to 10 W/sq m. However, the uncertainty in the analysis of monthly mean zonal cloud radiative effects is also produced by the low frequency of clear sky occurrence, illustrated when averaging over pixels or even over regions of 4deg longitude x 5deg latitude, corresponding to the spatial resolution of General Circulation Models. The systematic bias in the clear sky fluxes is not reflected in the zonal cloud radiative effects, because the clear sky regions selected by the different algorithms can occur in different geographic regions with different cloud properties.

  14. Risk Assessment in the 21st Century

    EPA Science Inventory

    For the past ~50 years, risk assessment depended almost exclusively on animal testing for hazard identification and dose-response assessment. Originally sound and effective, with increasing dependence on chemical tools and the number of chemicals in commerce, this traditional app...

  15. Simple and fast multiplex PCR method for detection of species origin in meat products.

    PubMed

    Izadpanah, Mehrnaz; Mohebali, Nazanin; Elyasi Gorji, Zahra; Farzaneh, Parvaneh; Vakhshiteh, Faezeh; Shahzadeh Fazeli, Seyed Abolhassan

    2018-02-01

    Identification of animal species is one of the major concerns in food regulatory control and quality assurance system. Different approaches have been used for species identification in animal origin of feedstuff. This study aimed to develop a multiplex PCR approach to detect the origin of meat and meat products. Specific primers were designed based on the conserved region of mitochondrial Cytochrome C Oxidase subunit I ( COX1 ) gene. This method could successfully distinguish the origin of the pig, camel, sheep, donkey, goat, cow, and chicken in one single reaction. Since PCR products derived from each species represent unique molecular weight, the amplified products could be identified by electrophoresis and analyzed based on their size. Due to the synchronized amplification of segments within a single PCR reaction, multiplex PCR is considered to be a simple, fast, and inexpensive technique that can be applied for identification of meat products in food industries. Nowadays, this technique has been considered as a practical method to identify the species origin, which could further applied for animal feedstuffs identification.

  16. 40 CFR 52.824 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... rules, “Iowa Administrative Code,” effective February 22, 1995. This revision approves new definitions... definition updates. (E) “Iowa Administrative Code,” section 567-31.1, effective February 22, 1995. This rule... Quality and replaced the Iowa air pollution control statute which appeared as Chapter 136B of the Code of...

  17. 40 CFR 52.824 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... rules, “Iowa Administrative Code,” effective February 22, 1995. This revision approves new definitions... definition updates. (E) “Iowa Administrative Code,” section 567-31.1, effective February 22, 1995. This rule... Quality and replaced the Iowa air pollution control statute which appeared as Chapter 136B of the Code of...

  18. 40 CFR 52.824 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... rules, “Iowa Administrative Code,” effective February 22, 1995. This revision approves new definitions... definition updates. (E) “Iowa Administrative Code,” section 567-31.1, effective February 22, 1995. This rule... Quality and replaced the Iowa air pollution control statute which appeared as Chapter 136B of the Code of...

  19. 40 CFR 52.824 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... rules, “Iowa Administrative Code,” effective February 22, 1995. This revision approves new definitions... definition updates. (E) “Iowa Administrative Code,” section 567-31.1, effective February 22, 1995. This rule... Quality and replaced the Iowa air pollution control statute which appeared as Chapter 136B of the Code of...

  20. Risk Assessment in the 21st Century - Conference Abstract

    EPA Science Inventory

    For the past ~50 years, risk assessment depended almost exclusively on animal testing for hazard identification and dose-response assessment. Originally sound and effective, with increasing dependence on chemical tools and the number of chemicals in commerce, this traditional ap...

  1. A novel technique to identify the nerve of origin in head and neck schwannomas.

    PubMed

    Ching, H H; Spinner, A G; Reeve, N H; Wang, R C

    2018-04-18

    Identifying the nerve of origin in head and neck schwannomas is a diagnostic challenge. Surgical management leads to a risk of permanent deficit. Accurate identification of the nerve would improve operative planning and patient counselling. Three patients with head and neck schwannomas underwent a diagnostic procedure hypothesised to identify the nerve of origin. The masses were infiltrated with 1 per cent lidocaine solution, and the patients were observed for neurological deficits. All three patients experienced temporary loss of nerve function after lidocaine injection. Facial nerve palsy, voice changes with documented unilateral same-side vocal fold paralysis, and numbness in the distribution of the maxillary nerve (V2), respectively, led to a likely identification of the nerve of origin. Injection of lidocaine into a schwannoma is a safe, in-office procedure that produces a temporary nerve deficit, which may enable accurate identification of the nerve of origin of a schwannoma. Identifying the nerve of origin enhances operative planning and patient counselling.

  2. Compressive sensing method for recognizing cat-eye effect targets.

    PubMed

    Li, Li; Li, Hui; Dang, Ersheng; Liu, Bo

    2013-10-01

    This paper proposes a cat-eye effect target recognition method with compressive sensing (CS) and presents a recognition method (sample processing before reconstruction based on compressed sensing, or SPCS) for image processing. In this method, the linear projections of original image sequences are applied to remove dynamic background distractions and extract cat-eye effect targets. Furthermore, the corresponding imaging mechanism for acquiring active and passive image sequences is put forward. This method uses fewer images to recognize cat-eye effect targets, reduces data storage, and translates the traditional target identification, based on original image processing, into measurement vectors processing. The experimental results show that the SPCS method is feasible and superior to the shape-frequency dual criteria method.

  3. 40 CFR 52.2239 - Original Identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Carbon Monoxide Reasonable Further Progress (RFP) curve adopted on May 8, 1985. (ii) Other material. (A...) Permit for battery receiving and breaking operation for Refined Metals Corporation which became effective... Efficiency. (35) Rule 1200-3-18-.46 Test Method for Determination of Solvent...

  4. 40 CFR 52.2239 - Original Identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Carbon Monoxide Reasonable Further Progress (RFP) curve adopted on May 8, 1985. (ii) Other material. (A...) Permit for battery receiving and breaking operation for Refined Metals Corporation which became effective... Efficiency. (35) Rule 1200-3-18-.46 Test Method for Determination of Solvent...

  5. Forensics for flatbed scanners

    NASA Astrophysics Data System (ADS)

    Gloe, Thomas; Franz, Elke; Winkler, Antje

    2007-02-01

    Within this article, we investigate possibilities for identifying the origin of images acquired with flatbed scanners. A current method for the identification of digital cameras takes advantage of image sensor noise, strictly speaking, the spatial noise. Since flatbed scanners and digital cameras use similar technologies, the utilization of image sensor noise for identifying the origin of scanned images seems to be possible. As characterization of flatbed scanner noise, we considered array reference patterns and sensor line reference patterns. However, there are particularities of flatbed scanners which we expect to influence the identification. This was confirmed by extensive tests: Identification was possible to a certain degree, but less reliable than digital camera identification. In additional tests, we simulated the influence of flatfielding and down scaling as examples for such particularities of flatbed scanners on digital camera identification. One can conclude from the results achieved so far that identifying flatbed scanners is possible. However, since the analyzed methods are not able to determine the image origin in all cases, further investigations are necessary.

  6. 40 CFR 52.677 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... identification of plan section. (a) This section identifies the original “Idaho Air Quality Implementation Plan... source review, and compliance schedules submitted on July 1, 1974, by the Governor. (12) Air quality... Community Services. (13) An amendment to Regulation C (Ambient Air Quality Standards) and Regulation S...

  7. 47 CFR 74.783 - Station identification.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... originating local programming as defined by § 74.701(h) operating over 0.001 kw peak visual power (0.002 kw... visual presentation or a clearly understandable aural presentation of the translator station's call... identification procedures given in § 73.1201 when locally originating programming, as defined by § 74.701(h). The...

  8. Initial Identification and Characterization of an Emerging Zoonotic Influenza Prior to Pandemic Spread

    DTIC Science & Technology

    2010-11-01

    equally closely strains of both H1N2 influenza A virus of swine origin and H3N2 influenza A virus of avian origin. The expected matches for each of...Naval Health Research Center Initial Identification and Characterization of an Emerging Zoonotic Influenza Virus Prior to Pandemic Spread...10.1128/JCM.01336-10 PMCID: PMC3020883 Initial Identification and Characterization of an Emerging Zoonotic Influenza Virus Prior to Pandemic

  9. Identification of FOPDT and SOPDT process dynamics using closed loop test.

    PubMed

    Bajarangbali, Raghunath; Majhi, Somanath; Pandey, Saurabh

    2014-07-01

    In this paper, identification of stable and unstable first order, second order overdamped and underdamped process dynamics with time delay is presented. Relay with hysteresis is used to induce a limit cycle output and using this information, unknown process model parameters are estimated. State space based generalized analytical expressions are derived to achieve accurate results. To show the performance of the proposed method expressions are also derived for systems with a zero. In real time systems, measurement noise is an important issue during identification of process dynamics. A relay with hysteresis reduces the effect of measurement noise, in addition a new multiloop control strategy is proposed to recover the original limit cycle. Simulation results are included to validate the effectiveness of the proposed method. Copyright © 2014 ISA. Published by Elsevier Ltd. All rights reserved.

  10. Material identification of real impact sounds: effects of size variation in steel, glass, wood, and plexiglass plates.

    PubMed

    Giordano, Bruno L; McAdams, Stephen

    2006-02-01

    Identification of the material of struck objects of variable size was investigated. Previous studies on this issue assumed recognition to be based on acoustical measures of damping. This assumption was tested, comparing the power of a damping measure in explaining identification data with that of several other acoustical descriptors. Listeners' performance was perfect with respect to gross material categories (steel-glass and wood-plexiglass) comprising materials of vastly different mechanical properties. Impaired performance was observed for materials within the same gross category, identification being based on the size of the objects alone. The damping descriptor accounted for the identification of the gross categories. However other descriptors such as signal duration explained the results equally well. Materials within the same gross category were identified mainly on the basis of signal frequency. Overall poor support for the relevance of damping to material perception was found. An analysis of the acoustical support for perfect material identification was carried out. Sufficient acoustical information for perfect performance was found. Thus, procedural biases for the origin of the effects of size could be discarded, pointing toward their cognitive, rather than methodological nature. Identification performance was explained in terms of the regularities of the everyday acoustical environment.

  11. Perceptual assessment of fricative--stop coarticulation.

    PubMed

    Repp, B H; Mann, V A

    1981-04-01

    The perceptual dependence of stop consonants on preceding fricatives [Mann and Repp, J. Acoust. Soc. Am. 69, 548--558 (1981)] was further investigated in two experiments employing both natural and synthetic speech. These experiments consistently replicated our original finding that listeners, report velar stops following [s]. In addition, our data confirmed earlier reports that natural fricative noises (excerpted from utterances of [st alpha], [sk alpha], [(formula: see text)k alpha]) contain cues to the following stop consonants; this was revealed in subjects' identifications of stops from isolated fricative noises and from stimuli consisting of these noises followed by synthetic CV portions drawn from a [t alpha]--[k alpha] continuum. However, these cues in the noise portion could not account for the contextual effect of fricative identity ([formula: see text] versus [sp) on stop perception (more "k" responses following [s]). Rather, this effect seems to be related to a coarticulatory influence of a preceding fricative on stop production; Subjects' responses to excised natural CV portions (with bursts and aspiration removed) were biased towards a relatively more forward place of stop articulation when the CVs had originally been preceded by [s]; and the identification of a preceding ambiguous fricative was biased in the direction of the original fricative context in which a given CV portion had been produced. These findings support an articulatory explanation for the effect of preceding fricatives on stop consonant perception.

  12. Identification of a Pi9 containing rice germplasm with a newly developed robust marker

    USDA-ARS?s Scientific Manuscript database

    The Pi9 gene, originating from Oryza minuta, is an effective resistance gene for controlling rice blast disease (Magnaporthe oryzae). However, currently available linked DNA markers do not accurately identify the function of Pi9, thus hindering its efficient incorporation into new cultivars through...

  13. 40 CFR 52.69 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Jefferson County Board of Health Air Pollution Control Rules and Regulations, which became effective June 14... Implementation Plan submitted on March 21, 1972, by the Alabama Air Pollution Control Commission. (2) Compliance schedules submitted on April 18, 1972, by the Alabama Air Pollution Control Commission. (3) Clarifying...

  14. 40 CFR 52.69 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Jefferson County Board of Health Air Pollution Control Rules and Regulations, which became effective June 14... Implementation Plan submitted on March 21, 1972, by the Alabama Air Pollution Control Commission. (2) Compliance schedules submitted on April 18, 1972, by the Alabama Air Pollution Control Commission. (3) Clarifying...

  15. 40 CFR 52.69 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Jefferson County Board of Health Air Pollution Control Rules and Regulations, which became effective June 14... Implementation Plan submitted on March 21, 1972, by the Alabama Air Pollution Control Commission. (2) Compliance schedules submitted on April 18, 1972, by the Alabama Air Pollution Control Commission. (3) Clarifying...

  16. Longitudinal Relations among Mexican-Origin Mothers' Cultural Characteristics, Cultural Socialization, and 5-Year-Old Children's Ethnic-Racial Identification

    ERIC Educational Resources Information Center

    Derlan, Chelsea L.; Umaña-Taylor, Adriana J.; Updegraff, Kimberly A.; Jahromi, Laudan B.

    2017-01-01

    The current longitudinal study examined the intergenerational transmission of ethnic-racial identity/identification and cultural orientation among Mexican-origin adolescent young mothers and their children (N = 161 dyads). Findings indicated that mothers' ethnic-racial identity and their cultural involvement were significantly associated with…

  17. The biological roots of political extremism.

    PubMed

    Keene, Justin Robert; Shoenberger, Heather; Berke, Collin K; Bolls, Paul D

    2017-01-01

    Recent research has revealed the complex origins of political identification and the possible effects of this identification on social and political behavior. This article reports the results of a structural equation analysis of national survey data that attempts to replicate the finding that an individual's negativity bias predicts conservative ideology. The analysis employs the Motivational Activation Measure (MAM) as an index of an individual's positivity offset and negativity bias. In addition, information-seeking behavior is assessed in relation to traditional and interactive media sources of political information. Results show that although MAM does not consistently predict political identification, it can be used to predict extremeness of political views. Specifically, high negativity bias was associated with extreme conservatism, whereas low negativity bias was associated with extreme liberalism. In addition, political identification was found to moderate the relationship between motivational traits and information-seeking behavior.

  18. Evaluation of a Wind Noise Attenuation Algorithm on Subjective Annoyance and Speech-in-Wind Performance.

    PubMed

    Korhonen, Petri; Kuk, Francis; Seper, Eric; Mørkebjerg, Martin; Roikjer, Majken

    2017-01-01

    Wind noise is a common problem reported by hearing aid wearers. The MarkeTrak VIII reported that 42% of hearing aid wearers are not satisfied with the performance of their hearing aids in situations where wind is present. The current study investigated the effect of a new wind noise attenuation (WNA) algorithm on subjective annoyance and speech recognition in the presence of wind. A single-blinded, repeated measures design was used. Fifteen experienced hearing aid wearers with bilaterally symmetrical (≤10 dB) mild-to-moderate sensorineural hearing loss participated in the study. Subjective rating for wind noise annoyance was measured for wind presented alone from 0° and 290° at wind speeds of 4, 5, 6, 7, and 10 m/sec. Phoneme identification performance was measured using Widex Office of Clinical Amplification Nonsense Syllable Test presented at 60, 65, 70, and 75 dB SPL from 270° in the presence of wind originating from 0° at a speed of 5 m/sec. The subjective annoyance from wind noise was reduced for wind originating from 0° at wind speeds from 4 to 7 m/sec. The largest improvement in phoneme identification with the WNA algorithm was 48.2% when speech was presented from 270° at 65 dB SPL and the wind originated from 0° azimuth at 5 m/sec. The WNA algorithm used in this study reduced subjective annoyance for wind speeds ranging from 4 to 7 m/sec. The algorithm was effective in improving speech identification in the presence of wind originating from 0° at 5 m/sec. These results suggest that the WNA algorithm used in the current study could expand the range of real-life situations where a hearing-impaired person can use the hearing aid optimally. American Academy of Audiology

  19. Alternatives to the sequential lineup: the importance of controlling the pictures.

    PubMed

    Lindsay, R C; Bellinger, K

    1999-06-01

    Because sequential lineups reduce false-positive choices, their use has been recommended (R. C. L. Lindsay, 1999; R. C. L. Lindsay & G. L. Wells, 1985). Blind testing is included in the recommended procedures. Police, concerned about blind testing, devised alternative procedures, including self-administered sequential lineups, to reduce use of relative judgments (G. L. Wells, 1984) while permitting the investigating officer to conduct the procedure. Identification data from undergraduates exposed to a staged crime (N = 165) demonstrated that 4 alternative identification procedures tested were less effective than the original sequential lineup. Allowing witnesses to control the photographs resulted in higher rates of false-positive identification. Self-reports of using relative judgments were shown to be postdictive of decision accuracy.

  20. Oligonucleotide (GTG)5 as a marker for Mycobacterium tuberculosis strain identification.

    PubMed Central

    Wiid, I J; Werely, C; Beyers, N; Donald, P; van Helden, P D

    1994-01-01

    Culture of Mycobacterium tuberculosis provides no information on the identity of a strain or the distribution of such a strain in the community. Strain identification of M. tuberculosis can help to address important epidemiological questions, e.g., the origin of an infection in a patient's household or community, whether reactivation of infection is endogenous or exogenous in origin, and the spread and early detection of organisms with acquired antibiotic resistance. To research this problem, strain identification must be reliable and accurate. Although genetic identification techniques already exist, it is valuable to have genetic identification techniques based on a number of genetic markers to improve the accurate identification of M. tuberculosis strains. We show that oligonucleotide (GTG)5 can be successfully applied to the identification of M. tuberculosis strains. This technique may be particularly useful in cases in which M. tuberculosis strains have few or no insertion elements (e.g., IS6110) or in identifying other strains of mycobacteria when informative probes are lacking. Images PMID:7914207

  1. Non-destructive geographical traceability of sea cucumber (Apostichopus japonicus) using near infrared spectroscopy combined with chemometric methods

    PubMed Central

    Cai, Rui; Wang, Shisheng; Tang, Bo; Li, Yueqing; Zhao, Weijie

    2018-01-01

    Sea cucumber is the major tonic seafood worldwide, and geographical origin traceability is an important part of its quality and safety control. In this work, a non-destructive method for origin traceability of sea cucumber (Apostichopus japonicus) from northern China Sea and East China Sea using near infrared spectroscopy (NIRS) and multivariate analysis methods was proposed. Total fat contents of 189 fresh sea cucumber samples were determined and partial least-squares (PLS) regression was used to establish the quantitative NIRS model. The ordered predictor selection algorithm was performed to select feasible wavelength regions for the construction of PLS and identification models. The identification model was developed by principal component analysis combined with Mahalanobis distance and scaling to the first range algorithms. In the test set of the optimum PLS models, the root mean square error of prediction was 0.45, and correlation coefficient was 0.90. The correct classification rates of 100% were obtained in both identification calibration model and test model. The overall results indicated that NIRS method combined with chemometric analysis was a suitable tool for origin traceability and identification of fresh sea cucumber samples from nine origins in China. PMID:29410795

  2. Non-destructive geographical traceability of sea cucumber (Apostichopus japonicus) using near infrared spectroscopy combined with chemometric methods.

    PubMed

    Guo, Xiuhan; Cai, Rui; Wang, Shisheng; Tang, Bo; Li, Yueqing; Zhao, Weijie

    2018-01-01

    Sea cucumber is the major tonic seafood worldwide, and geographical origin traceability is an important part of its quality and safety control. In this work, a non-destructive method for origin traceability of sea cucumber ( Apostichopus japonicus ) from northern China Sea and East China Sea using near infrared spectroscopy (NIRS) and multivariate analysis methods was proposed. Total fat contents of 189 fresh sea cucumber samples were determined and partial least-squares (PLS) regression was used to establish the quantitative NIRS model. The ordered predictor selection algorithm was performed to select feasible wavelength regions for the construction of PLS and identification models. The identification model was developed by principal component analysis combined with Mahalanobis distance and scaling to the first range algorithms. In the test set of the optimum PLS models, the root mean square error of prediction was 0.45, and correlation coefficient was 0.90. The correct classification rates of 100% were obtained in both identification calibration model and test model. The overall results indicated that NIRS method combined with chemometric analysis was a suitable tool for origin traceability and identification of fresh sea cucumber samples from nine origins in China.

  3. 40 CFR 52.1100 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... establish an Ambient Air Quality Monitoring Network. (45) Recodification of the Maryland Regulations... Practice (GEP) Stack Height Regulations, COMAR 10.18.01.08 (Determination of Ground Level Concentrations... consumption analysis. The amendments to COMAR 26.11.01.01, 26.11.02.10 (C)(9), and 26.11.06.14 were effective...

  4. 40 CFR 52.2477 - .Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...) as in effect 10/18/90; Washington Administrative Code Chapter 173-433 (Solid Fuel Burning Device... supplements to include the VMT Tracking Report data required for the Puget Sound CO Nonattainment Areas, dated... its I/M program in the two Washington ozone nonattainment areas classified as “marginal” and in the...

  5. 40 CFR 52.2477 - .Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) as in effect 10/18/90; Washington Administrative Code Chapter 173-433 (Solid Fuel Burning Device... supplements to include the VMT Tracking Report data required for the Puget Sound CO Nonattainment Areas, dated... its I/M program in the two Washington ozone nonattainment areas classified as “marginal” and in the...

  6. Color filter array pattern identification using variance of color difference image

    NASA Astrophysics Data System (ADS)

    Shin, Hyun Jun; Jeon, Jong Ju; Eom, Il Kyu

    2017-07-01

    A color filter array is placed on the image sensor of a digital camera to acquire color images. Each pixel uses only one color, since the image sensor can measure only one color per pixel. Therefore, empty pixels are filled using an interpolation process called demosaicing. The original and the interpolated pixels have different statistical characteristics. If the image is modified by manipulation or forgery, the color filter array pattern is altered. This pattern change can be a clue for image forgery detection. However, most forgery detection algorithms have the disadvantage of assuming the color filter array pattern. We present an identification method of the color filter array pattern. Initially, the local mean is eliminated to remove the background effect. Subsequently, the color difference block is constructed to emphasize the difference between the original pixel and the interpolated pixel. The variance measure of the color difference image is proposed as a means of estimating the color filter array configuration. The experimental results show that the proposed method is effective in identifying the color filter array pattern. Compared with conventional methods, our method provides superior performance.

  7. Outlier identification in urban soils and its implications for identification of potential contaminated land

    NASA Astrophysics Data System (ADS)

    Zhang, Chaosheng

    2010-05-01

    Outliers in urban soil geochemical databases may imply potential contaminated land. Different methodologies which can be easily implemented for the identification of global and spatial outliers were applied for Pb concentrations in urban soils of Galway City in Ireland. Due to its strongly skewed probability feature, a Box-Cox transformation was performed prior to further analyses. The graphic methods of histogram and box-and-whisker plot were effective in identification of global outliers at the original scale of the dataset. Spatial outliers could be identified by a local indicator of spatial association of local Moran's I, cross-validation of kriging, and a geographically weighted regression. The spatial locations of outliers were visualised using a geographical information system. Different methods showed generally consistent results, but differences existed. It is suggested that outliers identified by statistical methods should be confirmed and justified using scientific knowledge before they are properly dealt with.

  8. School Adjustment and Friendship Quality of First- and Second-Generation Adolescent Immigrants to Spain as a Function of Acculturation

    ERIC Educational Resources Information Center

    Alvarez Valdivia, Ibis M.; Schneider, Barry H.; Carrasco, Cecilia Villalobos

    2016-01-01

    The purpose of this study was to determine the links between school adjustment, friendship, and identification with both the cultures of origin and with the host culture. Our overriding hypothesis was that integration in Berry's terms, that is, simultaneous identification with both the culture of origin and the majority Spanish/Catalan culture,…

  9. Longitudinal relations among Mexican-origin mothers' cultural characteristics, cultural socialization, and 5-year-old children's ethnic-racial identification.

    PubMed

    Derlan, Chelsea L; Umaña-Taylor, Adriana J; Updegraff, Kimberly A; Jahromi, Laudan B

    2017-11-01

    The current longitudinal study examined the intergenerational transmission of ethnic-racial identity/identification and cultural orientation among Mexican-origin adolescent young mothers and their children (N = 161 dyads). Findings indicated that mothers' ethnic-racial identity and their cultural involvement were significantly associated with children's ethnic-racial identification via mothers' cultural socialization; however, associations varied significantly by children's gender and skin tone. For example, mothers' ethnic-racial centrality was positively associated with cultural socialization efforts among mothers with sons (regardless of skin tone); but with daughters, a positive association only emerged among those with lighter skin tones. Associations between cultural socialization and children's ethnic-racial identification also varied by children's gender and skin tone. For example, the relation between mothers' cultural socialization and children's self-labeling as Mexican was positive for girls regardless of skin tone, and for boys with lighter skin tones, but was not significant for boys with darker skin tones. Findings highlight the critical role of children's own characteristics, mothers' ethnic-racial identity and adaptive cultural characteristics, and mothers' cultural socialization efforts in the formation of young Mexican-origin children's ethnic-racial identification. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

  10. Identification of the geographical origins of sea cucumber (Apostichopus japonicus) in northern China by using stable isotope ratios and fatty acid profiles.

    PubMed

    Zhang, Xufeng; Liu, Yu; Li, Ying; Zhao, Xinda

    2017-03-01

    Geographic traceability is an important issue for food quality and safety control of seafood. In this study,δ 13 C and δ 15 N values, as well as fatty acid (FA) content of 133 samples of A. japonicus from seven sampling points in northern China Sea were determined to evaluate their applicability in the origin traceability of A. japonicus. Principal component analysis (PCA) and discriminant analysis (DA) were applied to different data sets in order to evaluate their performance in terms of classification or predictive ability. δ 13 C and δ 15 N values could effectively discriminate between different origins of A. japonicus. Significant differences in the FA compositions showed the effectiveness of FA composition as a tool for distinguishing between different origins of A. japonicus. The two technologies, combined with multivariate statistical analysis, can be promising methods to discriminate A. japonicus from different geographical areas. Copyright © 2016. Published by Elsevier Ltd.

  11. AUTOMATED BIOCHEMICAL IDENTIFICATION OF BACTERIAL FISH PATHOGENS USING THE ABBOTT QUANTUM II

    EPA Science Inventory

    The Quantum II, originally designed by Abbott Diagnostics for automated rapid identification of members of Enterobacteriaceae, was adapted for the identification of bacterial fish pathogens. he instrument operates as a spectrophotometer at a wavelength of 492.600 nm. ample cartri...

  12. Identification of Yr59 conferring high-temperature adult-plant resistance to stripe rust in wheat germplasm PI 178759

    USDA-ARS?s Scientific Manuscript database

    Stripe rust, caused by Puccinia striiformis f. sp. tritici, is one of the most widespread and destructive wheat diseases worldwide. Resistant cultivars are the preferred means of control. The spring wheat germplasm ‘PI 178759’ originating from Iraq showed effective resistance to stripe rust in fie...

  13. Automatic Identification of Artifact-Related Independent Components for Artifact Removal in EEG Recordings.

    PubMed

    Zou, Yuan; Nathan, Viswam; Jafari, Roozbeh

    2016-01-01

    Electroencephalography (EEG) is the recording of electrical activity produced by the firing of neurons within the brain. These activities can be decoded by signal processing techniques. However, EEG recordings are always contaminated with artifacts which hinder the decoding process. Therefore, identifying and removing artifacts is an important step. Researchers often clean EEG recordings with assistance from independent component analysis (ICA), since it can decompose EEG recordings into a number of artifact-related and event-related potential (ERP)-related independent components. However, existing ICA-based artifact identification strategies mostly restrict themselves to a subset of artifacts, e.g., identifying eye movement artifacts only, and have not been shown to reliably identify artifacts caused by nonbiological origins like high-impedance electrodes. In this paper, we propose an automatic algorithm for the identification of general artifacts. The proposed algorithm consists of two parts: 1) an event-related feature-based clustering algorithm used to identify artifacts which have physiological origins; and 2) the electrode-scalp impedance information employed for identifying nonbiological artifacts. The results on EEG data collected from ten subjects show that our algorithm can effectively detect, separate, and remove both physiological and nonbiological artifacts. Qualitative evaluation of the reconstructed EEG signals demonstrates that our proposed method can effectively enhance the signal quality, especially the quality of ERPs, even for those that barely display ERPs in the raw EEG. The performance results also show that our proposed method can effectively identify artifacts and subsequently enhance the classification accuracies compared to four commonly used automatic artifact removal methods.

  14. Automatic Identification of Artifact-related Independent Components for Artifact Removal in EEG Recordings

    PubMed Central

    Zou, Yuan; Nathan, Viswam; Jafari, Roozbeh

    2017-01-01

    Electroencephalography (EEG) is the recording of electrical activity produced by the firing of neurons within the brain. These activities can be decoded by signal processing techniques. However, EEG recordings are always contaminated with artifacts which hinder the decoding process. Therefore, identifying and removing artifacts is an important step. Researchers often clean EEG recordings with assistance from Independent Component Analysis (ICA), since it can decompose EEG recordings into a number of artifact-related and event related potential (ERP)-related independent components (ICs). However, existing ICA-based artifact identification strategies mostly restrict themselves to a subset of artifacts, e.g. identifying eye movement artifacts only, and have not been shown to reliably identify artifacts caused by non-biological origins like high-impedance electrodes. In this paper, we propose an automatic algorithm for the identification of general artifacts. The proposed algorithm consists of two parts: 1) an event-related feature based clustering algorithm used to identify artifacts which have physiological origins and 2) the electrode-scalp impedance information employed for identifying non-biological artifacts. The results on EEG data collected from 10 subjects show that our algorithm can effectively detect, separate, and remove both physiological and non-biological artifacts. Qualitative evaluation of the reconstructed EEG signals demonstrates that our proposed method can effectively enhance the signal quality, especially the quality of ERPs, even for those that barely display ERPs in the raw EEG. The performance results also show that our proposed method can effectively identify artifacts and subsequently enhance the classification accuracies compared to four commonly used automatic artifact removal methods. PMID:25415992

  15. DNA replication origins—where do we begin?

    PubMed Central

    Prioleau, Marie-Noëlle; MacAlpine, David M.

    2016-01-01

    For more than three decades, investigators have sought to identify the precise locations where DNA replication initiates in mammalian genomes. The development of molecular and biochemical approaches to identify start sites of DNA replication (origins) based on the presence of defining and characteristic replication intermediates at specific loci led to the identification of only a handful of mammalian replication origins. The limited number of identified origins prevented a comprehensive and exhaustive search for conserved genomic features that were capable of specifying origins of DNA replication. More recently, the adaptation of origin-mapping assays to genome-wide approaches has led to the identification of tens of thousands of replication origins throughout mammalian genomes, providing an unprecedented opportunity to identify both genetic and epigenetic features that define and regulate their distribution and utilization. Here we summarize recent advances in our understanding of how primary sequence, chromatin environment, and nuclear architecture contribute to the dynamic selection and activation of replication origins across diverse cell types and developmental stages. PMID:27542827

  16. Practical Method to Identify Orbital Anomaly as Breakup Event in the Geostationary Region

    DTIC Science & Technology

    2015-01-14

    point ! Geocentric distance at the pinch point Table 4 summarizes the results of the origin identifications. One object labeled x15300 was...Table 4. The result of origin identification of the seven detected objects Object name Parent object Inclination vector Pinch point Geocentric distance...of the object. X-Y, X’-Y’, and R.A.-Dec. represent the Image Coordinate before rotating the CCD sensor, after rotation, and the Geocentric Inertial

  17. Evaluation of a speaker identification system with and without fusion using three databases in the presence of noise and handset effects

    NASA Astrophysics Data System (ADS)

    S. Al-Kaltakchi, Musab T.; Woo, Wai L.; Dlay, Satnam; Chambers, Jonathon A.

    2017-12-01

    In this study, a speaker identification system is considered consisting of a feature extraction stage which utilizes both power normalized cepstral coefficients (PNCCs) and Mel frequency cepstral coefficients (MFCC). Normalization is applied by employing cepstral mean and variance normalization (CMVN) and feature warping (FW), together with acoustic modeling using a Gaussian mixture model-universal background model (GMM-UBM). The main contributions are comprehensive evaluations of the effect of both additive white Gaussian noise (AWGN) and non-stationary noise (NSN) (with and without a G.712 type handset) upon identification performance. In particular, three NSN types with varying signal to noise ratios (SNRs) were tested corresponding to street traffic, a bus interior, and a crowded talking environment. The performance evaluation also considered the effect of late fusion techniques based on score fusion, namely, mean, maximum, and linear weighted sum fusion. The databases employed were TIMIT, SITW, and NIST 2008; and 120 speakers were selected from each database to yield 3600 speech utterances. As recommendations from the study, mean fusion is found to yield overall best performance in terms of speaker identification accuracy (SIA) with noisy speech, whereas linear weighted sum fusion is overall best for original database recordings.

  18. DNA replication origins-where do we begin?

    PubMed

    Prioleau, Marie-Noëlle; MacAlpine, David M

    2016-08-01

    For more than three decades, investigators have sought to identify the precise locations where DNA replication initiates in mammalian genomes. The development of molecular and biochemical approaches to identify start sites of DNA replication (origins) based on the presence of defining and characteristic replication intermediates at specific loci led to the identification of only a handful of mammalian replication origins. The limited number of identified origins prevented a comprehensive and exhaustive search for conserved genomic features that were capable of specifying origins of DNA replication. More recently, the adaptation of origin-mapping assays to genome-wide approaches has led to the identification of tens of thousands of replication origins throughout mammalian genomes, providing an unprecedented opportunity to identify both genetic and epigenetic features that define and regulate their distribution and utilization. Here we summarize recent advances in our understanding of how primary sequence, chromatin environment, and nuclear architecture contribute to the dynamic selection and activation of replication origins across diverse cell types and developmental stages. © 2016 Prioleau and MacAlpine; Published by Cold Spring Harbor Laboratory Press.

  19. [Identification of original species of Mantidis Oötheca (Sangpiaoxiao) based on DNA barcoding].

    PubMed

    Wang, Xi; Hou, Fei-xia; Wang, Yi-xuan; Wang, Yu-xian; Li, Jun-de; Yuan, Yuan; Peng, Cheng; Guo, Jin-lin

    2015-10-01

    Both market research and literature reports both found that the ootheca of mantodea was all used as medicine. However, Chinese Pharmacopoeia only records the ootheca of three mantis species. The clinical use of ootheca unrecorded in Chinese Pharmacopoeia, will pose potential risks to drug safety. It's urgent to identify the origin of Mantidis Oötheca. The current researches about original animal in Mantidis Oötheca are based on morphology and unanimous. DNA barcoding fill gaps of the traditional morphological identification, which is widely used in animal classification studies. This study first use DNA barcoding to analyze genetic distance among different Mantidis Oötheca types, align COI sequences between mantis and Mantidis Oötheca and construct the phylogeny tree. The result confirmed that Tenodera sinensis and Hierodula patellifera were the origin insects of Tuanpiaoxiao and Heipiaoxiao, respectively, and Statilia maculate and Mantis religiosa were the origin insects of Changpiaoxiao.

  20. Visual Detection and Identification Are Not the Same: Evidence from Psychophysics and fMRI

    ERIC Educational Resources Information Center

    Straube, Sirko; Fahle, Manfred

    2011-01-01

    Sometimes object detection as opposed to identification is sufficient to initiate the appropriate action. To explore the neural origin of behavioural differences between the two tasks, we combine psychophysical measurements and fMRI, specifically contrasting shape detection versus identification of a figure. This figure consisted of Gabor elements…

  1. Exploring Dual Identification among Muslim-American Emerging Adults: A Mixed Methods Study

    ERIC Educational Resources Information Center

    Sirin, Selcuk R.; Bikmen, Nida; Mir, Madeeha; Fine, Michelle; Zaal, Mayida; Katsiaficas, Dalal

    2008-01-01

    This mixed methods study explored dual identification among Muslim-American emerging adults of immigrant origin. A closer look was taken at the relationship between American and Muslim identifications and how this relationship was influenced by experiences of discrimination, acculturative and religious practices, and whether it varied by gender.…

  2. Outlier identification and visualization for Pb concentrations in urban soils and its implications for identification of potential contaminated land.

    PubMed

    Zhang, Chaosheng; Tang, Ya; Luo, Lin; Xu, Weilin

    2009-11-01

    Outliers in urban soil geochemical databases may imply potential contaminated land. Different methodologies which can be easily implemented for the identification of global and spatial outliers were applied for Pb concentrations in urban soils of Galway City in Ireland. Due to its strongly skewed probability feature, a Box-Cox transformation was performed prior to further analyses. The graphic methods of histogram and box-and-whisker plot were effective in identification of global outliers at the original scale of the dataset. Spatial outliers could be identified by a local indicator of spatial association of local Moran's I, cross-validation of kriging, and a geographically weighted regression. The spatial locations of outliers were visualised using a geographical information system. Different methods showed generally consistent results, but differences existed. It is suggested that outliers identified by statistical methods should be confirmed and justified using scientific knowledge before they are properly dealt with.

  3. Data-driven mono-component feature identification via modified nonlocal means and MEWT for mechanical drivetrain fault diagnosis

    NASA Astrophysics Data System (ADS)

    Pan, Jun; Chen, Jinglong; Zi, Yanyang; Yuan, Jing; Chen, Binqiang; He, Zhengjia

    2016-12-01

    It is significant to perform condition monitoring and fault diagnosis on rolling mills in steel-making plant to ensure economic benefit. However, timely fault identification of key parts in a complicated industrial system under operating condition is still a challenging task since acquired condition signals are usually multi-modulated and inevitably mixed with strong noise. Therefore, a new data-driven mono-component identification method is proposed in this paper for diagnostic purpose. First, the modified nonlocal means algorithm (NLmeans) is proposed to reduce noise in vibration signals without destroying its original Fourier spectrum structure. During the modified NLmeans, two modifications are investigated and performed to improve denoising effect. Then, the modified empirical wavelet transform (MEWT) is applied on the de-noised signal to adaptively extract empirical mono-component modes. Finally, the modes are analyzed for mechanical fault identification based on Hilbert transform. The results show that the proposed data-driven method owns superior performance during system operation compared with the MEWT method.

  4. [Applications of DNA identification technology in protection of wild animals].

    PubMed

    Ni, Ping-Ya; Pei, Li; Ge, Wen-Dong; Zhang, Ying; Yang, Xue-Ying; Xu, Xiao-Yu; Tu, Zheng

    2011-12-01

    With the development of biotechnology, forensic DNA identification technology in protection of wild animals has been used more and more widely. This review introduces the global status of wildlife crime and the relevant protection to wildlife, outlines the practical applications of forensic DNA identification technology with regard to species identification, determination of geographic origin, individual identification and paternity identification. It focus on the techniques commonly used in DNA typing and their merits and demerits, as well as the problems and prospects of forensic DNA technology for wildlife conservation.

  5. Parental Modeling and Deidentification in Romantic Relationships Among Mexican-origin Youth.

    PubMed

    Kuo, Sally I-Chun; Wheeler, Lorey A; Updegraff, Kimberly A; McHale, Susan M; Umaña-Taylor, Adriana J; Perez-Brena, Norma J

    2017-10-01

    This study investigated youth's modeling of and de-identification from parents in romantic relationships, using two phases of data from adolescent siblings, mothers, and fathers in 246 Mexican-origin families. Each parent reported his/her marital satisfaction and conflict, and youth reported on parent-adolescent warmth and conflict at Time 1. Youth's reports of modeling of and de-identification from their mothers and fathers and three romantic relationship outcomes were assessed at Time 2. Findings revealed that higher parental marital satisfaction, lower marital conflict, and higher warmth and lower conflict in parent-adolescent relationships were associated with more modeling and less de-identification from parents. Moreover, higher de-identification was linked to a greater likelihood of youth being involved in a romantic relationship and cohabitation, whereas more modeling was linked to a lower likelihood of cohabitation and older age of first sex. Discussion underscores the importance of assessing parental modeling and de-identification and understanding correlates of these processes.

  6. Both odor identification and ApoE-ε4 contribute to normative cognitive aging.

    PubMed

    Finkel, Deborah; Reynolds, Chandra A; Larsson, Maria; Gatz, Margaret; Pedersen, Nancy L

    2011-12-01

    Research indicates that apoliprotein E (ApoE) plays a role in the development of Alzheimer's disease (AD) and possibly in the cognitive decline associated with normative aging. More recently, researchers have shown that ApoE is expressed in olfactory brain structures, and a relationship among ApoE, AD, and olfactory function has been proposed. In the current analyses, we investigated the contribution of ApoE and odor identification in decline trajectories associated with normative cognitive aging in various domains, using longitudinal data on cognitive performance available from the Swedish Adoption/Twin Study of Aging. Data on both ApoE status and olfactory functioning were available from 455 individuals ranging in age from 50 to 88 years at the first measurement occasion. Odor identification was measured via a mailed survey. Cognitive performance was assessed in up to 5 waves of in-person testing covering a period of 16 years. Latent growth curve analyses incorporating odor identification and ApoE status indicated a main effect of odor identification on the performance level in three cognitive domains: verbal, memory, and speed. A main effect of ApoE on rates of decline after age 65 was found for verbal, spatial, and speed factors. The consistency of results across cognitive domains provides support for theories that posit central nervous system-wide origins of the olfaction-cognition-ApoE relationship; however, olfactory errors and APOE ε4 show unique and differential effects on cognitive trajectory features.

  7. Intermarriage and the Intergenerational Transmission of Ethnic Identity and Human Capital for Mexican Americans

    PubMed Central

    Duncan, Brian; Trejo, Stephen J.

    2011-01-01

    We investigate whether selective intermarriage and endogenous ethnic identification interact to hide some of the intergenerational progress achieved by the Mexican-origin population in the United States. In part, we do this by comparing an “objective” indicator of Mexican descent (based on the countries of birth of the respondent and his parents and grandparents) with the standard “subjective” measure of Mexican self-identification (based on the respondent’s answer to the Hispanic origin question). For third-generation Mexican-American youth, we show that ethnic attrition is substantial and could produce significant downward bias in standard measures of attainment which rely on ethnic self-identification. PMID:22058602

  8. An improved design method of a tuned mass damper for an in-service footbridge

    NASA Astrophysics Data System (ADS)

    Shi, Weixing; Wang, Liangkun; Lu, Zheng

    2018-03-01

    Tuned mass damper (TMD) has a wide range of applications in the vibration control of footbridges. However, the traditional engineering design method may lead to a mistuned TMD. In this paper, an improved TMD design method based on the model updating is proposed. Firstly, the original finite element model (FEM) is studied and the natural characteristics of the in-service or newly built footbridge is identified by field test, and then the original FEM is updated. TMD is designed according to the new updated FEM, and it is optimized according to the simulation on vibration control effects. Finally, the installation and field measurement of TMD are carried out. The improved design method can be applied to both in-service and newly built footbridges. This paper illustrates the improved design method with an engineering example. The frequency identification results of field test and original FEM show that there is a relatively large difference between them. The TMD designed according to the updated FEM has better vibration control effect than the TMD designed according to the original FEM. The site test results show that TMD has good effect on controlling human-induced vibrations.

  9. 21 CFR 864.9160 - Blood group substances of nonhuman origin for in vitro diagnostic use.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Blood group substances of nonhuman origin for in... Used In Establishments That Manufacture Blood and Blood Products § 864.9160 Blood group substances of nonhuman origin for in vitro diagnostic use. (a) Identification. Blood group substances of nonhuman origin...

  10. 21 CFR 864.9160 - Blood group substances of nonhuman origin for in vitro diagnostic use.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Blood group substances of nonhuman origin for in... Used In Establishments That Manufacture Blood and Blood Products § 864.9160 Blood group substances of nonhuman origin for in vitro diagnostic use. (a) Identification. Blood group substances of nonhuman origin...

  11. 21 CFR 864.9160 - Blood group substances of nonhuman origin for in vitro diagnostic use.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Blood group substances of nonhuman origin for in... Used In Establishments That Manufacture Blood and Blood Products § 864.9160 Blood group substances of nonhuman origin for in vitro diagnostic use. (a) Identification. Blood group substances of nonhuman origin...

  12. Multidimensional Modeling of Atmospheric Effects and Surface Heterogeneities on Remote Sensing

    NASA Technical Reports Server (NTRS)

    Gerstl, S. A. W.; Simmer, C.; Zardecki, A. (Principal Investigator)

    1985-01-01

    The overall goal of this project is to establish a modeling capability that allows a quantitative determination of atmospheric effects on remote sensing including the effects of surface heterogeneities. This includes an improved understanding of aerosol and haze effects in connection with structural, angular, and spatial surface heterogeneities. One important objective of the research is the possible identification of intrinsic surface or canopy characteristics that might be invariant to atmospheric perturbations so that they could be used for scene identification. Conversely, an equally important objective is to find a correction algorithm for atmospheric effects in satellite-sensed surface reflectances. The technical approach is centered around a systematic model and code development effort based on existing, highly advanced computer codes that were originally developed for nuclear radiation shielding applications. Computational techniques for the numerical solution of the radiative transfer equation are adapted on the basis of the discrete-ordinates finite-element method which proved highly successful for one and two-dimensional radiative transfer problems with fully resolved angular representation of the radiation field.

  13. 12 CFR 268.601 - EEO group statistics.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ..., national origin, sex and disability(ies) of its employees. (b) Data on race, national origin and sex shall... disclosure. If, thereafter, the employee declines to change the apparently inaccurate self identification... or maintain any information on the race, national origin or sex of individual employees except in...

  14. 76 FR 69328 - Proposed Collection; Comment Request; Race and National Origin Identification

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-08

    ... DEPARTMENT OF THE TREASURY Proposed Collection; Comment Request; Race and National Origin... INFORMATION: OMB Number: 1505-0195. Type of Review: Revision of a currently approved collection. Title: Race...Connector, is used to capture race and national origin information electronically from an applicant. The...

  15. Ab initio gene identification in metagenomic sequences

    PubMed Central

    Zhu, Wenhan; Lomsadze, Alexandre; Borodovsky, Mark

    2010-01-01

    We describe an algorithm for gene identification in DNA sequences derived from shotgun sequencing of microbial communities. Accurate ab initio gene prediction in a short nucleotide sequence of anonymous origin is hampered by uncertainty in model parameters. While several machine learning approaches could be proposed to bypass this difficulty, one effective method is to estimate parameters from dependencies, formed in evolution, between frequencies of oligonucleotides in protein-coding regions and genome nucleotide composition. Original version of the method was proposed in 1999 and has been used since for (i) reconstructing codon frequency vector needed for gene finding in viral genomes and (ii) initializing parameters of self-training gene finding algorithms. With advent of new prokaryotic genomes en masse it became possible to enhance the original approach by using direct polynomial and logistic approximations of oligonucleotide frequencies, as well as by separating models for bacteria and archaea. These advances have increased the accuracy of model reconstruction and, subsequently, gene prediction. We describe the refined method and assess its accuracy on known prokaryotic genomes split into short sequences. Also, we show that as a result of application of the new method, several thousands of new genes could be added to existing annotations of several human and mouse gut metagenomes. PMID:20403810

  16. 29 CFR 1614.601 - EEO group statistics.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... origin, sex and disability of its employees. (b) Data on race, national origin and sex shall be collected..., thereafter, the employee declines to change the apparently inaccurate self-identification, the agency must..., national origin or sex of individual employees except when an automated data processing system is used in...

  17. 29 CFR 1614.601 - EEO group statistics.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... origin, sex and disability of its employees. (b) Data on race, national origin and sex shall be collected..., thereafter, the employee declines to change the apparently inaccurate self-identification, the agency must..., national origin or sex of individual employees except when an automated data processing system is used in...

  18. 29 CFR 1614.601 - EEO group statistics.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... origin, sex and disability of its employees. (b) Data on race, national origin and sex shall be collected..., thereafter, the employee declines to change the apparently inaccurate self-identification, the agency must..., national origin or sex of individual employees except when an automated data processing system is used in...

  19. 29 CFR 1614.601 - EEO group statistics.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... origin, sex and disability of its employees. (b) Data on race, national origin and sex shall be collected..., thereafter, the employee declines to change the apparently inaccurate self-identification, the agency must..., national origin or sex of individual employees except when an automated data processing system is used in...

  20. Visualization and Enabling Science at PO.DAAC

    NASA Astrophysics Data System (ADS)

    Tauer, E.; To, C.

    2017-12-01

    Facilitating the identification of appropriate data for scientific inquiry is important for efficient progress, but mechanisms for that identification vary, as does the effectiveness of those mechanisms. Appropriately crafted visualizations provide the means to quickly assess science data and scientific features, but providing the right visualization to the right application can present challenges. Even greater is the challenge of generating and/or re-constituting visualizations on the fly, particularly for large datasets. One avenue to mitigate the challenge is to arrive at an optimized intermediate data format that is tuned for rapid processing without sacrificing the provenance trace back to the original source data. This presentation will discuss the results of trading several current approaches towards an intermediate data format, and suggest a list of key attributes that will facilitate rapid visualization, and in the process, facilitate the identification of the right data for a given application.

  1. Private content identification based on soft fingerprinting

    NASA Astrophysics Data System (ADS)

    Voloshynovskiy, Sviatoslav; Holotyak, Taras; Koval, Oleksiy; Beekhof, Fokko; Farhadzadeh, Farzad

    2011-02-01

    In many problems such as biometrics, multimedia search, retrieval, recommendation systems requiring privacypreserving similarity computations and identification, some binary features are stored in the public domain or outsourced to third parties that might raise certain privacy concerns about the original data. To avoid this privacy leak, privacy protection is used. In most cases, privacy protection is uniformly applied to all binary features resulting in data degradation and corresponding loss of performance. To avoid this undesirable effect we propose a new privacy amplification technique that is based on data hiding principles and benefits from side information about bit reliability a.k.a. soft fingerprinting. In this paper, we investigate the identification-rate vs privacy-leak trade-off. The analysis is performed for the case of a perfect match between side information shared between the encoder and decoder as well as for the case of partial side information.

  2. 76 FR 5340 - Schedules for Atlantic Shark Identification Workshops and Protected Species Safe Handling...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-31

    ... inclement weather, NMFS cancelled the Protected Species Safe Handling, Release, and Identification workshop..., 2011, due to inclement weather along the east coast of the United States on the date of the originally...

  3. An intervention to decrease patient identification band errors in a children's hospital.

    PubMed

    Hain, Paul D; Joers, B; Rush, M; Slayton, J; Throop, P; Hoagg, S; Allen, L; Grantham, J; Deshpande, J K

    2010-06-01

    Patient misidentification continues to be a quality and safety issue. There is a paucity of US data describing interventions to reduce identification band error rates. Monroe Carell Jr Children's Hospital at Vanderbilt. Percentage of patients with defective identification bands. Web-based surveys were sent, asking hospital personnel to anonymously identify perceived barriers to reaching zero defects with identification bands. Corrective action plans were created and implemented with ideas from leadership, front-line staff and the online survey. Data from unannounced audits of patient identification bands were plotted on statistical process control charts and shared monthly with staff. All hospital personnel were expected to "stop the line" if there were any patient identification questions. The first audit showed a defect rate of 20.4%. The original mean defect rate was 6.5%. After interventions and education, the new mean defect rate was 2.6%. (a) The initial rate of patient identification band errors in the hospital was higher than expected. (b) The action resulting in most significant improvement was staff awareness of the problem, with clear expectations to immediately stop the line if a patient identification error was present. (c) Staff surveys are an excellent source of suggestions for combating patient identification issues. (d) Continued audit and data collection is necessary for sustainable staff focus and continued improvement. (e) Statistical process control charts are both an effective method to track results and an easily understood tool for sharing data with staff.

  4. Quantum confined Stark effect in organic fluorophores.

    NASA Astrophysics Data System (ADS)

    Peng, Xihong; Anderson, John; Tepper, Gary; Bandyopadhyay, Supriyo; Nayak, Saroj

    2008-03-01

    Fluorescent molecules have widely been used to detect and visualize structure and processes in biological samples due to its extraordinary sensitivity. However, the emission spectra of flurophores are usually broad and the accurate identification is difficult. Recently, experiments show that energy shifts by Stark effect can be used to aid the identification of organic molecules [1]. Stark effect originates from the shifting/splitting of energy levels when a molecule is under an external electric field, which shows a shift/splitting of a peak in absorption/emission spectra. The size of the shift depends on the magnitude of the external field and the molecular structure. In this talk we will show our theoretical study of the peak shifts on emission spectra for a series of organic fluorophores such as tyrosine, tryptophan, rhodamine123 and coumarin314 using density functional theory. We find that a particular peak shift is determined by the local dipole moments of molecular orbitals rather than the global dipole moment of the molecule. These molecular-specific shifts in emission spectra may enable to improve molecular identification in biosensors. Our results will be compared with experimental data. [1]Unpublished, S. Sarkar, B. Kanchibotla, S. Bandyopadhyay, G. Tepper, J. Edwards, J. Anderson, and R. Kessick.

  5. 28 CFR 17.25 - Identification and markings.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... classified at a level equivalent to that level of classification assigned by the originating foreign government. (c) Information assigned a level of classification under predecessor Executive Orders shall be... ACCESS TO CLASSIFIED INFORMATION Classified Information § 17.25 Identification and markings. (a...

  6. Development of Amplified 16S Ribosomal DNA Restriction Analysis for Identification of Actinomyces Species and Comparison with Pyrolysis-Mass Spectrometry and Conventional Biochemical Tests

    PubMed Central

    Hall, Val; O’Neill, G. L.; Magee, J. T.; Duerden, B. I.

    1999-01-01

    Identification of Actinomyces spp. by conventional phenotypic methods is notoriously difficult and unreliable. Recently, the application of chemotaxonomic and molecular methods has clarified the taxonomy of the group and has led to the recognition of several new species. A practical and discriminatory identification method is now needed for routine identification of clinical isolates. Amplified 16S ribosomal DNA restriction analysis (ARDRA) was applied to reference strains (n = 27) and clinical isolates (n = 36) of Actinomyces spp. and other gram-positive rods. Clinical strains were identified initially to the species level by conventional biochemical tests. However, given the low degree of confidence in conventional methods, the findings obtained by ARDRA were also compared with those obtained by pyrolysis-mass spectrometry. The ARDRA profiles generated by the combination of HaeIII and HpaII endonuclease digestion differentiated all reference strains to the species or subspecies level. The profiles correlated well with the findings obtained by pyrolysis-mass spectrometry and by conventional tests and enabled the identification of 31 of 36 clinical isolates to the species level. ARDRA was shown to be a simple, rapid, cost-effective, and highly discriminatory method for routine identification of Actinomyces spp. of clinical origin. PMID:10364594

  7. Ameloglyphics: A possible forensic tool for person identification following high temperature and acid exposure

    PubMed Central

    Juneja, Manjushree; Juneja, Saurabh; Rakesh, Nagaraju; Bhoomareddy Kantharaj, Yashoda Devi

    2016-01-01

    Introduction: Forensic odontology is a branch that is evolving over time and has opened newer avenues that may help in the identification of individuals. Tooth prints are the enamel rod end patterns on tooth surface and they are considered as a hard tissue analog to fingerprints. Teeth have the highest resistance to most environmental effects like fire, desiccation, and decomposition, and may be used as a forensic evidence. Aims and Objectives: The aim of the study was to evaluate if the tooth prints could be used for an individual's identification and reproducibility and permanency of these tooth prints after exposing the teeth to acid and various degrees of temperature. Materials and Methods: 90 tooth prints from 20 freshly extracted maxillary premolar teeth were obtained. Cellophane tape technique was used to record enamel rod end patterns on tooth surface. Ten teeth (one from each patient) were immersed in 36.46% hydrochloric acid and the tooth prints were obtained at various intervals (5 min, 10 min, and 20 min). The other 10 teeth (one from each patient) were incinerated and impression was made at various intervals (80° C, 400° C, 600° C, and 750° C). Tooth prints obtained from different teeth (total of 90 tooth prints) were analyzed using Verifinger® standard SDK version 5.0 software. Results: All the 20 original tooth prints were distinct from each other and no inter-individual or intra-individual similarity was found. The tooth prints from the same tooth after it was exposed to acid or heat were reproducible and showed high to very high similarity with the original tooth print of that particular tooth stored in the database. Conclusion: Tooth prints may be used as an effective aid in person identification even in adverse conditions such as burn and acid attack injuries. PMID:27051220

  8. Infectious causes of fever of unknown origin.

    PubMed

    McGregor, Alastair C; Moore, David A

    2015-06-01

    The causes of fever of unknown origin (FUO) are changing because advances in clinical practice and diagnostics have facilitated the identification of some infections. A variety of bacterial infections can cause FUO, and these can be divided into those that are easy to identify using culture and those that require serological or molecular tests for identification. A number of viral, parasitic and fungal infections can also cause prolonged fever. This article summarises the clinical features and diagnostic strategy of these infections. © Royal College of Physicians 2015. All rights reserved.

  9. [The identification investigation of the material evidence of biological origin after multifactorial exposure].

    PubMed

    Iakovlev, D Iu; Solodun, Iu V; Proskurin, V N

    1999-01-01

    The possibility of investigating pieces of material evidence of biological origin after exposure to various factors is evaluated. The possibility of detecting proteins of liquid media of human organism by electrophoresis in polyacrylamide denatured gel is investigated. The method is intended for identification of biological material in a state of grave destruction. Methodology of such studies is proposed. The data indicate that the structural integrity and qualitative composition of the spectrum of main serum proteins are retained after combined exposure to damaging factors and complete destruction of blood cells.

  10. What You Need to Know When Taking Anticoagulantion Medication

    MedlinePlus

    ... or week. However, once the medication leaves the original bottle, it loses its identification and instruction label. ... the number prescription on the label matches the original prescription.  Plan to get a new prescription when ...

  11. 5 CFR 1312.8 - Standard identification and markings.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... CLASSIFICATION, DOWNGRADING, DECLASSIFICATION AND SAFEGUARDING OF NATIONAL SECURITY INFORMATION Classification.... (a) Original classification. At the time classified material is produced, the classifier shall apply...: (1) Classification authority. The name/personal identifier, and position title of the original...

  12. 5 CFR 1312.8 - Standard identification and markings.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... CLASSIFICATION, DOWNGRADING, DECLASSIFICATION AND SAFEGUARDING OF NATIONAL SECURITY INFORMATION Classification.... (a) Original classification. At the time classified material is produced, the classifier shall apply...: (1) Classification authority. The name/personal identifier, and position title of the original...

  13. 5 CFR 1312.8 - Standard identification and markings.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... CLASSIFICATION, DOWNGRADING, DECLASSIFICATION AND SAFEGUARDING OF NATIONAL SECURITY INFORMATION Classification.... (a) Original classification. At the time classified material is produced, the classifier shall apply...: (1) Classification authority. The name/personal identifier, and position title of the original...

  14. Identification of parental line specific effects of MLF2 on resistance to coccidiosis in chickens

    PubMed Central

    2011-01-01

    Background MLF2 was the candidate gene associated with coccidiosis resistance in chickens. Although single marker analysis supported the association between MLF2 and coccidiosis resistance, causative mutation relevant to coccidiosis was not identified yet. Thus, this study suggested segregation analysis of MLF2 haplotype and the association test of the other candidate genes using improved data transformation. Results A haplotype probably originated from one parental line was found out of 4 major haplotypes of MLF2. Frequency of this haplotype was 0.2 in parental chickens and its offspring in 12 families. Allele substitution effect of the MLF2 haplotype originated from a specific line was associated with increased body weight and fecal egg count explaining coccidiosis resistance. Nevertheless Box-Cox transformation was able to improve normality; association test did not produce obvious different results compared with analysis with log transformed phenotype. Conclusion Allele substitution effect analysis and classification of MLF2 haplotype identified the segregation of haplotype associated with coccidiosis resistance. The haplotype originated from a specific parental line was associated with improving disease resistance. Estimating effect of MLF2 haplotype on coccidiosis resistance will provide useful information for selecting animals or lines for future study. PMID:21645301

  15. Multiple Identities.

    ERIC Educational Resources Information Center

    Butler, John Sibley

    1990-01-01

    Discusses use of the term "African-American" in the context of relationships among country of origin, identification with that country, and the American experience. Finds no association between name identification and current Black social movements. Suggests that the issue should not overshadow continued effort to gain economic stability…

  16. The use of Matrix-assisted laser desorption ionization-time of flight mass spectrometry in the identification of Francisella tularensis.

    PubMed

    Karatuna, Onur; Celebi, Bekir; Can, Simge; Akyar, Isin; Kilic, Selcuk

    2016-01-15

    Francisella tularensis is the cause of the zoonotic disease tularemia and is classified among highly pathogenic bacteria (HPB) due to its low infection dose and potential for airborne transmission. In the case of HBP, there is a pressing need for rapid, accurate and reliable identification. Phenotypic identification of Francisella species is inappropriate for clinical microbiology laboratories because it is time-consuming, hazardous and subject to variable interpretation. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) was recently evaluated as a useful tool for the rapid identification of a variety of microorganisms. In this study, we evaluated the use of MALDI-TOF MS for the rapid identification of Francisella tularensis and differentiation of its subspecies. Using national collection of Francisella isolates from the National Tularemia Reference Laboratory (Public Health Institute of Turkey, Ankara), a total of 75 clinical isolates were investigated by species and subspecies-specific polymerase chain reaction (PCR) test and MALDI-TOF MS. All isolates were originally identified as F. tularensis subsp. holarctica due to RD1 subspecies-specific PCR result. For all isolates MALDI-TOF MS provided results in concordance with subspecies-specific PCR analysis. Although PCR-based methods are effective in identifying Francisella species, they are labor-intensive and take longer periods of time to obtain the results when compared with MALDI-TOF MS. MALDI-TOF MS appeared to be a rapid, reliable and cost-effective identification technique for Francisella spp. Shorter analysis time and low cost make this an appealing new option in microbiology laboratories.

  17. The use of matrix-assisted laser desorption ionization-time of flight mass spectrometry in the identification of Francisella tularensis

    PubMed Central

    Karatuna, Onur; Çelebi, Bekir; Can, Simge; Akyar, Işın; Kiliç, Selçuk

    2016-01-01

    Francisella tularensis is the cause of the zoonotic disease tularemia and is classified among highly pathogenic bacteria (HPB) due to its low infection dose and potential for airborne transmission. In the case of HBP, there is a pressing need for rapid, accurate and reliable identification. Phenotypic identification of Francisella species is inappropriate for clinical microbiology laboratories because it is time-consuming, hazardous and subject to variable interpretation. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) was recently evaluated as a useful tool for the rapid identification of a variety of microorganisms. In this study, we evaluated the use of MALDI-TOF MS for the rapid identification of Francisella tularensis and differentiation of its subspecies. Using national collection of Francisella isolates from the National Tularemia Reference Laboratory (Public Health Institution of Turkey, Ankara), a total of 75 clinical isolates were investigated by species and subspecies-specific polymerase chain reaction (PCR) test and MALDI-TOF MS. All isolates were originally identified as F. tularensis subsp. holarctica according to region of difference 1 (RD1) subspecies-specific PCR results. For all isolates MALDI-TOF MS provided results in concordance with subspecies-specific PCR analysis. Although PCR-based methods are effective in identifying Francisella species, they are labor-intensive and take longer periods of time to obtain the results when compared with MALDI-TOF MS. MALDI-TOF MS appeared to be a rapid, reliable and cost-effective identification technique for Francisella spp. Shorter analysis time and low cost make this an appealing new option in microbiology laboratories. PMID:26773181

  18. Evaluation of speaker de-identification based on voice gender and age conversion

    NASA Astrophysics Data System (ADS)

    Přibil, Jiří; Přibilová, Anna; Matoušek, Jindřich

    2018-03-01

    Two basic tasks are covered in this paper. The first one consists in the design and practical testing of a new method for voice de-identification that changes the apparent age and/or gender of a speaker by multi-segmental frequency scale transformation combined with prosody modification. The second task is aimed at verification of applicability of a classifier based on Gaussian mixture models (GMM) to detect the original Czech and Slovak speakers after applied voice deidentification. The performed experiments confirm functionality of the developed gender and age conversion for all selected types of de-identification which can be objectively evaluated by the GMM-based open-set classifier. The original speaker detection accuracy was compared also for sentences uttered by German and English speakers showing language independence of the proposed method.

  19. Identification of detergents for forensic fiber analysis.

    PubMed

    Heider, Emily C; Mujumdar, Nirvani; Campiglia, Andres D

    2016-11-01

    Trace fibers are an important form of trace evidence, and identification of exogenous substances on textile fibers provides valuable information about the origin of the fiber. Laundering textiles can provide a unique fluorescent spectral signature of the whitening agent in the detergent that adsorbs to the fiber. Using fluorescence microscopy, the spectral characteristics of seven detergents adsorbed to single fibers drawn from laundered textiles were investigated, and principal component analysis of clusters was used to characterize the type of detergent on the fiber. On dyed nylon fibers, spectra from eight different detergent pairs could be resolved and washed validation fibers correctly classified. On dyed acrylic fibers, five different detergent pairs could be resolved and identified. Identification of the detergent type may prove useful in matching a trace fiber to its bulk specimen of origin.

  20. Idols as Sunshine or Road Signs: Comparing Absorption-Addiction Idolatry With Identification-Emulation Idolatry.

    PubMed

    Cheung, Chau-Kiu; Yue, Xiao Dong

    2018-01-01

    This study seeks to contrast absorption-addiction idolatry and identification-emulation idolatry. Whereas absorption-addiction idolatry progresses from entertainment/socializing to personalizing and obsession about the idol, identification-emulation idolatry unfolds in terms of identification, attachment, romantization, idealization, and consumption about the idol or his or her derivatives. Based on a sample of 1310 secondary school and university students in Hong Kong, the study verified the original factor model composed of five first-order identification-emulation idolatry and three first-order absorption-addiction idolatry factors, with the latter more predictable by fans' club membership.

  1. Origins of Ethnic Strife.

    ERIC Educational Resources Information Center

    Firestone, Robert W.

    Group identification is a major cause of religious, racial, and international conflict. Many forms of group identification are fantasy bonds, imagined connections with others offering security at the expense of individual self-realization. The fantasy bond forms in childhood in response to inadequate parenting. Human beings are not inherently…

  2. 78 FR 15337 - IRS Truncated Taxpayer Identification Numbers; Hearing Cancellation

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-03-11

    ... Service (IRS), Treasury. ACTION: Cancellation of a notice of public hearing on proposed rulemaking. SUMMARY: This document cancels a public hearing on proposed regulations under the Internal Revenue Code... IRS truncated taxpayer identification number, a TTIN. DATES: The public hearing, originally scheduled...

  3. 22 CFR 9.7 - Identification and marking.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... Foreign Relations DEPARTMENT OF STATE GENERAL SECURITY INFORMATION REGULATIONS § 9.7 Identification and marking. (a) Classified information shall be marked pursuant to the standards set forth in section 1.6 of... guidance in 12 Foreign Affairs Manual (FAM). (b) Foreign government information shall retain its original...

  4. 47 CFR 73.1212 - Sponsorship identification; list retention; related requirements.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 4 2013-10-01 2013-10-01 false Sponsorship identification; list retention; related requirements. 73.1212 Section 73.1212 Telecommunication FEDERAL COMMUNICATIONS COMMISSION... location specified under § 73.3526. If the broadcast is originated by a network, the list may, instead, be...

  5. 47 CFR 73.1212 - Sponsorship identification; list retention; related requirements.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 4 2012-10-01 2012-10-01 false Sponsorship identification; list retention; related requirements. 73.1212 Section 73.1212 Telecommunication FEDERAL COMMUNICATIONS COMMISSION... location specified under § 73.3526. If the broadcast is originated by a network, the list may, instead, be...

  6. 47 CFR 73.1212 - Sponsorship identification; list retention; related requirements.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 4 2014-10-01 2014-10-01 false Sponsorship identification; list retention; related requirements. 73.1212 Section 73.1212 Telecommunication FEDERAL COMMUNICATIONS COMMISSION... location specified under § 73.3526. If the broadcast is originated by a network, the list may, instead, be...

  7. 22 CFR 9.7 - Identification and marking.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... Foreign Relations DEPARTMENT OF STATE GENERAL SECURITY INFORMATION REGULATIONS § 9.7 Identification and marking. (a) Classified information shall be marked pursuant to the standards set forth in section 1.6 of... guidance in 12 Foreign Affairs Manual (FAM). (b) Foreign government information shall retain its original...

  8. Origins, Spectral Interpretation, Resource Identification, Security, Regolith Explorer Planning (OSIRIS-REx)

    NASA Technical Reports Server (NTRS)

    Nakamura-Messenger, Keiko; Messenger, Scott; Keller, Lindsay; Righter, Kevin

    2014-01-01

    Scientists at ARES are preparing to curate and analyze samples from the first U.S. mission to return samples from an asteroid. The Origins-Spectral Interpretation- Resource Identification-Security-Regolith Explorer, or OSIRIS-REx, was selected by NASA as the third mission in its New Frontiers Program. The robotic spacecraft will launch in 2016 and rendezvous with the near-Earth asteroid Bennu, in 2020. A robotic arm will collect at least 60 grams of material from the surface of the asteroid to be returned to Earth in 2023 for worldwide distribution by the NASA Astromaterials Curation Facility at ARES.

  9. Snakes on the Balearic islands: an invasion tale with implications for native biodiversity conservation.

    PubMed

    Silva-Rocha, Iolanda; Salvi, Daniele; Sillero, Neftalí; Mateo, Jose A; Carretero, Miguel A

    2015-01-01

    Biological invasions are a major conservation threat for biodiversity worldwide. Islands are particularly vulnerable to invasive species, especially Mediterranean islands which have suffered human pressure since ancient times. In the Balearic archipelago, reptiles represent an outstanding case with more alien than native species. Moreover, in the last decade a new wave of alien snakes landed in the main islands of the archipelago, some of which were originally snake-free. The identification of the origin and colonization pathways of alien species, as well as the prediction of their expansion, is crucial to develop effective conservation strategies. In this study, we used molecular markers to assess the allochthonous status and the putative origin of the four introduced snake species (Hemorrhois hippocrepis, Malpolon monspessulanus, Macroprotodon mauritanicus and Rhinechis scalaris) as well as ecological niche models to infer their patterns of invasion and expansion based on current and future habitat suitability. For most species, DNA sequence data suggested the Iberian Peninsula as the potential origin of the allochthonous populations, although the shallow phylogeographic structure of these species prevented the identification of a restricted source-area. For all of them, the ecological niche models showed a current low habitat suitability in the Balearic, which is however predicted to increase significantly in the next few decades under climate change scenarios. Evidence from direct observations and spatial distribution of the first-occurrence records of alien snakes (but also lizards and worm lizards) suggest the nursery trade, and in particular olive tree importation from Iberian Peninsula, as the main pathway of introduction of alien reptiles in the Balearic islands. This trend has been reported also for recent invasions in NE Spain, thus showing that olive trees transplantation may be an effective vector for bioinvasion across the Mediterranean. The combination of molecular and ecological tools used in this study reveals a promising approach for the understanding of the complex invasion process, hence guiding conservation management actions.

  10. Snakes on the Balearic Islands: An Invasion Tale with Implications for Native Biodiversity Conservation

    PubMed Central

    Sillero, Neftalí; Mateo, Jose A.; Carretero, Miguel A.

    2015-01-01

    Biological invasions are a major conservation threat for biodiversity worldwide. Islands are particularly vulnerable to invasive species, especially Mediterranean islands which have suffered human pressure since ancient times. In the Balearic archipelago, reptiles represent an outstanding case with more alien than native species. Moreover, in the last decade a new wave of alien snakes landed in the main islands of the archipelago, some of which were originally snake-free. The identification of the origin and colonization pathways of alien species, as well as the prediction of their expansion, is crucial to develop effective conservation strategies. In this study, we used molecular markers to assess the allochthonous status and the putative origin of the four introduced snake species (Hemorrhois hippocrepis, Malpolon monspessulanus, Macroprotodon mauritanicus and Rhinechis scalaris) as well as ecological niche models to infer their patterns of invasion and expansion based on current and future habitat suitability. For most species, DNA sequence data suggested the Iberian Peninsula as the potential origin of the allochthonous populations, although the shallow phylogeographic structure of these species prevented the identification of a restricted source-area. For all of them, the ecological niche models showed a current low habitat suitability in the Balearic, which is however predicted to increase significantly in the next few decades under climate change scenarios. Evidence from direct observations and spatial distribution of the first-occurrence records of alien snakes (but also lizards and worm lizards) suggest the nursery trade, and in particular olive tree importation from Iberian Peninsula, as the main pathway of introduction of alien reptiles in the Balearic islands. This trend has been reported also for recent invasions in NE Spain, thus showing that olive trees transplantation may be an effective vector for bioinvasion across the Mediterranean. The combination of molecular and ecological tools used in this study reveals a promising approach for the understanding of the complex invasion process, hence guiding conservation management actions. PMID:25853711

  11. Odorant-binding protein-based identification of natural spatial repellents for the African malaria mosquito Anopheles gambiae.

    PubMed

    Kröber, Thomas; Koussis, Konstantinos; Bourquin, Martine; Tsitoura, Panagiota; Konstantopoulou, Maria; Awolola, Taiwo Sam; Dani, Francesca R; Qiao, Huili; Pelosi, Paolo; Iatrou, Kostas; Guerin, Patrick M

    2018-05-01

    There is increasing interest in the development of effective mosquito repellents of natural origin to reduce transmission of diseases such as malaria and yellow fever. To achieve this we have employed an in vitro competition assay involving odorant-binding proteins (OBPs) of the malaria mosquito, Anopheles gambiae, with a predominantly female expression bias to identify plant essential oils (EOs) containing bioactive compounds that target mosquito olfactory function. EOs and their fractions capable of binding to such OBPs displayed repellence against female mosquitoes in a laboratory repellent assay. Repellent EOs were subjected to gas chromatographic analysis linked to antennogram (EAG) recordings from female A. gambiae to identify the biologically active constituents. Among these compounds cumin alcohol, carvacrol, ethyl cinnamate and butyl cinnamate proved as effective as DEET at an equivalent dose in the repellent assay, and combinations of carvacrol with either butyl cinnamate or cumin alcohol proved to be significantly more effective than DEET in the assay. When tested as spatial repellents in experimental shelters housing sleeping humans in northern Nigeria a binary mixture of carvacrol plus cumin alcohol caused mosquitoes to leave shelters in significantly higher numbers to those induced by DEET in female Anopheles spp. and in numbers equivalent to that of DEET in Culex spp. mosquitoes. These findings indicate an approach for the identification of biologically active molecules of natural origin serving as repellents for mosquitoes. Copyright © 2018 Elsevier Ltd. All rights reserved.

  12. Genome-wide identification and characterisation of human DNA replication origins by initiation site sequencing (ini-seq)

    PubMed Central

    Langley, Alexander R.; Gräf, Stefan; Smith, James C.; Krude, Torsten

    2016-01-01

    Next-generation sequencing has enabled the genome-wide identification of human DNA replication origins. However, different approaches to mapping replication origins, namely (i) sequencing isolated small nascent DNA strands (SNS-seq); (ii) sequencing replication bubbles (bubble-seq) and (iii) sequencing Okazaki fragments (OK-seq), show only limited concordance. To address this controversy, we describe here an independent high-resolution origin mapping technique that we call initiation site sequencing (ini-seq). In this approach, newly replicated DNA is directly labelled with digoxigenin-dUTP near the sites of its initiation in a cell-free system. The labelled DNA is then immunoprecipitated and genomic locations are determined by DNA sequencing. Using this technique we identify >25,000 discrete origin sites at sub-kilobase resolution on the human genome, with high concordance between biological replicates. Most activated origins identified by ini-seq are found at transcriptional start sites and contain G-quadruplex (G4) motifs. They tend to cluster in early-replicating domains, providing a correlation between early replication timing and local density of activated origins. Origins identified by ini-seq show highest concordance with sites identified by SNS-seq, followed by OK-seq and bubble-seq. Furthermore, germline origins identified by positive nucleotide distribution skew jumps overlap with origins identified by ini-seq and OK-seq more frequently and more specifically than do sites identified by either SNS-seq or bubble-seq. PMID:27587586

  13. Genome-wide identification and characterisation of human DNA replication origins by initiation site sequencing (ini-seq).

    PubMed

    Langley, Alexander R; Gräf, Stefan; Smith, James C; Krude, Torsten

    2016-12-01

    Next-generation sequencing has enabled the genome-wide identification of human DNA replication origins. However, different approaches to mapping replication origins, namely (i) sequencing isolated small nascent DNA strands (SNS-seq); (ii) sequencing replication bubbles (bubble-seq) and (iii) sequencing Okazaki fragments (OK-seq), show only limited concordance. To address this controversy, we describe here an independent high-resolution origin mapping technique that we call initiation site sequencing (ini-seq). In this approach, newly replicated DNA is directly labelled with digoxigenin-dUTP near the sites of its initiation in a cell-free system. The labelled DNA is then immunoprecipitated and genomic locations are determined by DNA sequencing. Using this technique we identify >25,000 discrete origin sites at sub-kilobase resolution on the human genome, with high concordance between biological replicates. Most activated origins identified by ini-seq are found at transcriptional start sites and contain G-quadruplex (G4) motifs. They tend to cluster in early-replicating domains, providing a correlation between early replication timing and local density of activated origins. Origins identified by ini-seq show highest concordance with sites identified by SNS-seq, followed by OK-seq and bubble-seq. Furthermore, germline origins identified by positive nucleotide distribution skew jumps overlap with origins identified by ini-seq and OK-seq more frequently and more specifically than do sites identified by either SNS-seq or bubble-seq. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  14. 40 CFR 52.2565 - Original identification of plan.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) Amended Regulations VI and VII, and an Identification and Analysis of the Impact of the 1979 West Virginia... State of West Virginia on November 4, 1983 which establishes an Ambient Air Quality Monitoring Network...) Revision to the State implementation plan consisting of a good engineering practice (GEP) for stack heights...

  15. 40 CFR 52.2565 - Original identification of plan.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...) Amended Regulations VI and VII, and an Identification and Analysis of the Impact of the 1979 West Virginia... State of West Virginia on November 4, 1983 which establishes an Ambient Air Quality Monitoring Network...) Revision to the State implementation plan consisting of a good engineering practice (GEP) for stack heights...

  16. 40 CFR 52.2565 - Original identification of plan.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...) Amended Regulations VI and VII, and an Identification and Analysis of the Impact of the 1979 West Virginia... State of West Virginia on November 4, 1983 which establishes an Ambient Air Quality Monitoring Network...) Revision to the State implementation plan consisting of a good engineering practice (GEP) for stack heights...

  17. 40 CFR 52.2565 - Original identification of plan.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...) Amended Regulations VI and VII, and an Identification and Analysis of the Impact of the 1979 West Virginia... State of West Virginia on November 4, 1983 which establishes an Ambient Air Quality Monitoring Network...) Revision to the State implementation plan consisting of a good engineering practice (GEP) for stack heights...

  18. 22 CFR 228.03 - Identification of principal geographic code numbers.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Identification of principal geographic code numbers. 228.03 Section 228.03 Foreign Relations AGENCY FOR INTERNATIONAL DEVELOPMENT RULES ON SOURCE, ORIGIN AND NATIONALITY FOR COMMODITIES AND SERVICES FINANCED BY USAID Definitions and Scope of This Part...

  19. Assimilation, Ethnic Competition, and Ethnic Identities of U.S.-Born Persons of Mexican Origin.

    ERIC Educational Resources Information Center

    Ono, Hiromi

    2002-01-01

    Explores processes governing the ethnic identification of second and later generations of Mexican immigrant descendants using the Latino National Political Survey. Ethnic identification arises directly from cultural continuity and lower levels of assimilation, experiences with ethnic competition, and a combination of both processes. Experiences…

  20. "I want to be a daddy!": meanings of masculine identifications in girls.

    PubMed

    Rees, K

    1987-07-01

    This paper suggests revisions in our understanding of feminine identity formation, the girl's negative oedipus complex, and masculine identifications in girls. Analytic material from the cases of three girls is used to explore the various origins and intrapsychic functions of masculine identifications at each phase of the girl's development. Accounts of feminine development based on such concepts as castration shock, primary femininity, primary identification with mother, or core gender identity are seen as oversimplified. Feminine and masculine identifications are neither primary nor secondary, but the product of a long line of development, of ongoing conflict resolution, and of defensive transformations.

  1. 12 CFR 268.601 - EEO group statistics.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... race, national origin, sex and disability(ies) of its employees. (b) Data on race, national origin and sex shall be collected by voluntary self-identification. If an employee does not voluntarily provide... prevent its unauthorized disclosure. If, thereafter, the employee declines to change the apparently...

  2. 12 CFR 268.601 - EEO group statistics.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... race, national origin, sex and disability(ies) of its employees. (b) Data on race, national origin and sex shall be collected by voluntary self-identification. If an employee does not voluntarily provide... prevent its unauthorized disclosure. If, thereafter, the employee declines to change the apparently...

  3. 12 CFR 268.601 - EEO group statistics.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... race, national origin, sex and disability(ies) of its employees. (b) Data on race, national origin and sex shall be collected by voluntary self-identification. If an employee does not voluntarily provide... prevent its unauthorized disclosure. If, thereafter, the employee declines to change the apparently...

  4. 40 CFR 52.1037 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... the Maine Department of Environmental Protection to Portsmouth Naval Shipyard on July 25, 1997. (F..., Amendment #4, condition 4 for Portsmouth Naval Shipyard issued by Maine Department of Environmental... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Maine § 52.1037 Original...

  5. 40 CFR 52.1037 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... the Maine Department of Environmental Protection to Portsmouth Naval Shipyard on July 25, 1997. (F..., Amendment #4, condition 4 for Portsmouth Naval Shipyard issued by Maine Department of Environmental... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Maine § 52.1037 Original...

  6. 40 CFR 52.1037 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... the Maine Department of Environmental Protection to Portsmouth Naval Shipyard on July 25, 1997. (F..., Amendment #4, condition 4 for Portsmouth Naval Shipyard issued by Maine Department of Environmental... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS (CONTINUED) Maine § 52.1037 Original...

  7. Defects and Impurities in 4H- and 6H-SiC Homoepitaxial Layers: Identification, Origin, Effect on Properties of Ohmic Contacts and Insulating Layers and Reduction

    DTIC Science & Technology

    1998-03-01

    98-3/31/98 R. F. Davis, M. O. Aboelfotoh , B. J. Baliga*, R. J. Nemanicht, P. Ananthanarayanan*, V. Nagapudi*, and H. S. Tomozawa Department of...Reduction 6. AUTHOR(S) R. F. Davis, M. O. Aboelfotoh , B. J. Baliga and R. J. Nemanich S. FUNDING NUMBERS ydl4951—01 312 N00179 N66020 4B855 7

  8. Acidification and γ-aminobutyric acid independently alter kairomone-induced behaviour

    PubMed Central

    Cohen, Jonathan H.

    2016-01-01

    Exposure to high pCO2 or low pH alters sensation and behaviour in many marine animals. We show that crab larvae lose their ability to detect and/or process predator kairomones after exposure to low pH over a time scale relevant to diel pH cycles in coastal environments. Previous work suggests that acidification affects sensation and behaviour through altered neural function, specifically the action of γ-aminobutyric acid (GABA), because a GABA antagonist, gabazine, restores the original behaviour. Here, however, gabazine resulted in a loss of kairomone detection/processing, regardless of pH. Our results also suggest that GABAergic signalling is necessary for kairomone identification in these larvae. Hence, the mechanism for the observed pH effect varies from the original GABA hypothesis. Furthermore, we suggest that this pH effect is adaptive under diel-cycling pH. PMID:27703697

  9. Bioactive Natural Product and Superacid Chemistry for Lead Compound Identification: A Case Study of Selective hCA III and L-Type Ca2+ Current Inhibitors for Hypotensive Agent Discovery.

    PubMed

    Carreyre, Hélène; Carré, Grégoire; Ouedraogo, Maurice; Vandebrouck, Clarisse; Bescond, Jocelyn; Supuran, Claudiu T; Thibaudeau, Sébastien

    2017-05-31

    Dodoneine (Ddn) is one of the active compounds identified from Agelanthus dodoneifolius , which is a medicinal plant used in African pharmacopeia and traditional medicine for the treatment of hypertension. In the context of a scientific program aiming at discovering new hypotensive agents through the original combination of natural product discovery and superacid chemistry diversification, and after evidencing dodoneine's vasorelaxant effect on rat aorta, superacid modifications allowed us to generate original analogues which showed selective human carbonic anhydrase III (hCA III) and L-type Ca 2+ current inhibition. These derivatives can now be considered as new lead compounds for vasorelaxant therapeutics targeting these two proteins.

  10. Development of molecular markers for determining continental origin of wood from White Oaks (Quercus L. sect. Quercus)

    Treesearch

    Hilke Schroeder; Richard Cronn; Yulai Yanbaev; Tara Jennings; Malte Mader; Bernd Degen; Birgit Kersten; Dusan Gomory

    2016-01-01

    To detect and avoid illegal logging of valuable tree species, identification methods for the origin of timber are necessary. We used next-generation sequencing to identify chloroplast genome regions that differentiate the origin of white oaks from the three continents; Asia, Europe, and North America. By using the chloroplast genome of Asian Q. mongolica...

  11. Hyper sausage neuron: Recognition of transgenic sugar-beet based on terahertz spectroscopy

    NASA Astrophysics Data System (ADS)

    Liu, Jianjun; Li, Zhi; Hu, Fangrong; Chen, Tao; Du, Yong; Xin, Haitao

    2015-01-01

    This paper presents a novel approach for identification of terahertz (THz) spectral of genetically modified organisms (GMOs) based on Hyper Sausage Neuron (HSN), and THz transmittance spectra of some typical transgenic sugar-beet samples are investigated to demonstrate its feasibility. Principal component analysis (PCA) is applied to extract features of the spectrum data, and instead of the original spectrum data, the feature signals are fed into the HSN pattern recognition, a new multiple weights neural network (MWNN). The experimental result shows that the HSN model not only can correctly classify different types of transgenic sugar-beets, but also can reject identity non similar samples in the same type. The proposed approach provides a new effective method for detection and identification of GMOs by using THz spectroscopy.

  12. Identification of Transgenic Organisms Based on Terahertz Spectroscopy and Hyper Sausage Neuron

    NASA Astrophysics Data System (ADS)

    Liu, J.; Li, Zh.; Hu, F.; Chen, T.; Du, Y.; Xin, H.

    2015-03-01

    This paper presents a novel approach for identifi cation of terahertz (THz) spectra of genetically modifi ed organisms (GMOs) based on hyper sausage neuron (HSN), and THz transmittance spectra of some typical transgenic sugarbeet samples are investigated to demonstrate its feasibility. Principal component analysis (PCA) is applied to extract features of the spectrum data, and instead of the original spectrum data, the feature signals are fed into the HSN pattern recognition, a new multiple weights neural network (MWNN). The experimental result shows that the HSN model not only can correctly classify different types of transgenic sugar-beets, but also can reject nonsimilar samples of the same type. The proposed approach provides a new effective method for detection and identification of genetically modified organisms by using THz spectroscopy.

  13. [Isolation and identification methods of enterobacteria group and its technological advancement].

    PubMed

    Furuta, Itaru

    2007-08-01

    In the last half-century, isolation and identification methods of enterobacteria groups have markedly improved by technological advancement. Clinical microbiology tests have changed overtime from tube methods to commercial identification kits and automated identification. Tube methods are the original method for the identification of enterobacteria groups, that is, a basically essential method to recognize bacterial fermentation and biochemical principles. In this paper, traditional tube tests are discussed, such as the utilization of carbohydrates, indole, methyl red, and citrate and urease tests. Commercial identification kits and automated instruments by computer based analysis as current methods are also discussed, and those methods provide rapidity and accuracy. Nonculture techniques of nucleic acid typing methods using PCR analysis, and immunochemical methods using monoclonal antibodies can be further developed.

  14. Effect of intonation on cantonese lexical tones.

    PubMed

    Ma, Joan K-Y; Ciocca, Valter; Whitehill, Tara L

    2006-12-01

    In tonal languages, there are potential conflicts between the FO-based changes due to the coexistence of intonation and lexical tones. In the present study, the interaction of tone and intonation in Cantonese was examined using acoustic and perceptual analyses. The acoustic patterns of tones at the initial, medial, and final positions of questions and statements were measured. Results showed that intonation affects both the FO level and contour, while the duration of the six tones varied as a function of positions within intonation contexts. All six tones at the final position of questions showed rising FO contour, regardless of their canonical form. Listeners were overall more accurate in the identification of tones presented within the original carrier than of the same tones in isolation. However, a large proportion of tones 33, 21, 23, and 22 at the final position of questions were misperceived as tone 25 both within the original carrier and as isolated words. These results suggest that although the intonation context provided cues for correct tone identification, the intonation-induced changes in FO contour cannot always be perceptually compensated for, resulting in some erroneous perception of the identity of Cantonese tone.

  15. Controlled recovery of phylogenetic communities from an evolutionary model using a network approach

    NASA Astrophysics Data System (ADS)

    Sousa, Arthur M. Y. R.; Vieira, André P.; Prado, Carmen P. C.; Andrade, Roberto F. S.

    2016-04-01

    This works reports the use of a complex network approach to produce a phylogenetic classification tree of a simple evolutionary model. This approach has already been used to treat proteomic data of actual extant organisms, but an investigation of its reliability to retrieve a traceable evolutionary history is missing. The used evolutionary model includes key ingredients for the emergence of groups of related organisms by differentiation through random mutations and population growth, but purposefully omits other realistic ingredients that are not strictly necessary to originate an evolutionary history. This choice causes the model to depend only on a small set of parameters, controlling the mutation probability and the population of different species. Our results indicate that for a set of parameter values, the phylogenetic classification produced by the used framework reproduces the actual evolutionary history with a very high average degree of accuracy. This includes parameter values where the species originated by the evolutionary dynamics have modular structures. In the more general context of community identification in complex networks, our model offers a simple setting for evaluating the effects, on the efficiency of community formation and identification, of the underlying dynamics generating the network itself.

  16. 9 CFR 79.5 - Issuance of certificates.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... any unused space on the document for recording animal identification, must be crossed out in ink; and (4) The following information must be typed or written in ink in the identification column on the original and each copy of the certificate and must be circled or boxed, also in ink, so that no additional...

  17. 9 CFR 79.5 - Issuance of certificates.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... any unused space on the document for recording animal identification, must be crossed out in ink; and (4) The following information must be typed or written in ink in the identification column on the original and each copy of the certificate and must be circled or boxed, also in ink, so that no additional...

  18. 9 CFR 79.5 - Issuance of certificates.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... any unused space on the document for recording animal identification, must be crossed out in ink; and (4) The following information must be typed or written in ink in the identification column on the original and each copy of the certificate and must be circled or boxed, also in ink, so that no additional...

  19. 77 FR 38775 - Schedules for Atlantic Shark Identification Workshops and Protected Species Safe Handling...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-29

    ..., 2012, in Rosenberg, TX, has been changed to August 16, 2012. This workshop notice originally published... & Suites, 28332 SW Freeway 59, Rosenberg, TX 77471. The July and September workshop dates remain unchanged... Atlantic Shark Identification Workshop scheduled for August 9, 2012, in Rosenberg, TX, has been rescheduled...

  20. A Rejoinder on the PSW Model for SLD Identification: Still Concerned

    ERIC Educational Resources Information Center

    McGill, Ryan J.; Busse, R. T.

    2017-01-01

    We address Christo, D'Incau, and Ponzuric's response to our original contribution to this journal "When theory trumps science: A critique of the PSW model for SLD identification." Christo and colleagues stated that there is an empirical support for pattern of strengths and weaknesses (PSW) procedures as a component in the identification…

  1. 9 CFR 81.4 - Issuance of certificates.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... certificates. As an alternative to typing or writing individual animal identification on a certificate, another... be crossed out in ink; and (4) The following information must be typed or written in ink in the identification column on the original and each copy of the certificate and must be circled or boxed, also in ink...

  2. 9 CFR 81.4 - Issuance of certificates.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... certificates. As an alternative to typing or writing individual animal identification on a certificate, another... be crossed out in ink; and (4) The following information must be typed or written in ink in the identification column on the original and each copy of the certificate and must be circled or boxed, also in ink...

  3. ION COMPOSITION ELUCIDATION (ICE): A HIGH RESOLUTION MASS SPECTROMETRIC TECHNIQUE FOR CHARACTERIZATION AND IDENTIFICATION OF ORGANIC COMPOUNDS

    EPA Science Inventory

    Identifying compounds found in the environment without knowledge of their origin is a very difficult analytical problem. Comparison of the low resolution mass spectrum of a compound with those in the NIST or Wiley mass spectral libraries can provide a tentative identification whe...

  4. Identification of the ancestral haplotype for apolipoprotein B suggests an African origin of Homo sapiens sapiens and traces their subsequent migration to Europe and the Pacific.

    PubMed Central

    Rapacz, J; Chen, L; Butler-Brunner, E; Wu, M J; Hasler-Rapacz, J O; Butler, R; Schumaker, V N

    1991-01-01

    The probable ancestral haplotype for human apolipoprotein B (apoB) has been identified through immunological analysis of chimpanzee and gorilla serum and sequence analysis of their DNA. Moreover, the frequency of this ancestral apoB haplotype among different human populations provides strong support for the African origin of Homo sapiens sapiens and their subsequent migration from Africa to Europe and to the Pacific. The approach used here for the identification of the ancestral human apoB haplotype is likely to be applicable to many other genes. PMID:1996341

  5. Identification of the ancestral haplotype for apolipoprotein B suggests an African origin of Homo sapiens sapiens and traces their subsequent migration to Europe and the Pacific

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Rapacz, J.; Hasler-Rapacz, J.O.; Chen, L.

    1991-02-15

    The probable ancestral haplotype for human apolipoprotein B (apoB) has been identified through immunological analysis of chimpanzee and gorilla serum and sequence analysis of their DNA. Moreover, the frequency of this ancestral apoB haplotype among different human populations provides strong support for the African origin of Homo sapiens sapiens and their subsequent migration from Africa to Europe and to the Pacific. The approach used here for the identification of the ancestral human apoB haplotype is likely to be applicable to many other genes.

  6. Study of weathering effects on the distribution of aromatic steroid hydrocarbons in crude oils and oil residues.

    PubMed

    Wang, Chuanyuan; Chen, Bing; Zhang, Baiyu; Guo, Ping; Zhao, Mingming

    2014-01-01

    The composition and distribution of triaromatic steroid hydrocarbons in oil residues after biodegradation and photo-oxidation processes were detected, and the diagnostic ratios for oil spill identification were developed and evaluated based on the relative standard deviation (RSD) and the repeatability limit. The preferential loss of C27 methyl triaromatic steranes (MTAS) relative to C28 MTAS and C29 MTAS was shown during the photo-oxidation process. In contrast to the photochemical degradation, the MTAS with the original 20R biological configuration was preferentially degraded during the biodegradation process. The RSD of most of the diagnostic ratios of MTAS ranged from 9 to 84% during the photo-oxidation process. However, the RSDs of such ratios derived from MTAS were all <5% even in high biodegradation, and such parameters may also provide new methods on oil spill identification. The parameters of monoaromatic sterane and monoaromatic sterane are not used well for oil spill identification after photo-oxidation. The triaromatic steroid hydrocarbons retained their molecular compositions after biodegradation and photo-oxidation and most of the diagnostic ratios derived from them could be efficiently used in oil spill identification.

  7. Theft reduction in a grocery store through product identification and graphing of losses for employees

    PubMed Central

    Carter, Ned; Holmström, Anne; Simpanen, Monica; Melin, Lennart

    1988-01-01

    Shoplifting and employee theft constitute a major problem for retailers. Previous research has described techniques for effectively reducing either type of theft but has not addressed the problem of thefts of unspecified origin. In a grocery store we evaluated the effect of identifying for employees frequently stolen products from three groups of items and graphing, twice weekly in the lunchroom, losses for the separate groups. After the products were identified and losses graphed, thefts from the three groups dropped from eight per day to two per day. PMID:16795718

  8. Evaluation of Automated Yeast Identification System

    NASA Technical Reports Server (NTRS)

    McGinnis, M. R.

    1996-01-01

    One hundred and nine teleomorphic and anamorphic yeast isolates representing approximately 30 taxa were used to evaluate the accuracy of the Biolog yeast identification system. Isolates derived from nomenclatural types, environmental, and clinica isolates of known identity were tested in the Biolog system. Of the isolates tested, 81 were in the Biolog database. The system correctly identified 40, incorrectly identified 29, and was unable to identify 12. Of the 28 isolates not in the database, 18 were given names, whereas 10 were not. The Biolog yeast identification system is inadequate for the identification of yeasts originating from the environment during space program activities.

  9. World Trade Center human identification project: experiences with individual body identification cases.

    PubMed

    Budimlija, Zoran M; Prinz, Mechthild K; Zelson-Mundorff, Amy; Wiersema, Jason; Bartelink, Eric; MacKinnon, Gaille; Nazzaruolo, Bianca L; Estacio, Sheila M; Hennessey, Michael J; Shaler, Robert C

    2003-06-01

    To present individual body identification efforts, as part of the World Trade Center (WTC) mass disaster identification project. More than 500 samples were tested by using polymerase chain reaction (PCR) amplification and short tandem repeat (STR) typing. The extent to which the remains were fragmented and affected by taphonomic factors complicated the identification project. Anthropologists reviewed 19,000 samples, and detected inconsistencies in 69, which were further split into 239 new cases and re-sampled by DNA specialists. The severity and nature of the disaster required an interdisciplinary effort. DNA profiling of 500 samples was successful in 75% of the cases. All discrepancies, which occurred between bone and tissue samples taken from the same body part, were resolved by re-sampling and re-testing of preferably bone tissue. Anthropologists detected inconsistencies in 69 cases, which were then split into 239 new cases. Out of 125 "split" cases, 65 were excluded from their original case. Of these 65 cases, 37 did not match any profiles in M-FISys, probably because profiles were incomplete or no exemplar for the victim was available. Out of the 60 remains not excluded from their original case, 30 were partial profiles and did not reach the statistical requirement to match their original case, because the population frequency of the DNA profile had to be

  10. 40 CFR 52.590 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... PROGRAMS (CONTINUED) APPROVAL AND PROMULGATION OF IMPLEMENTATION PLANS Georgia> § 52.590 Original... of Georgia” and all revisions submitted by Georgia that were federally approved prior to December 1... public hearing and miscellaneous additions to Chapter 391-3-1, Sections .02(2)(d), .02(2)(q), .02(2)(r...

  11. 76 FR 40935 - Agency Information Collection Activities: Proposed Collection Comments Requested Race and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-12

    ...] Agency Information Collection Activities: Proposed Collection Comments Requested Race and National Origin... collection. (2) Title of the Form/Collection: Race and National Origin Identification. (3) Agency form number.... Other: none. Need for Collection: The information collection is used to maintain Race and National...

  12. [Data fusion and multi-components quantitative analysis for identification and quality evaluation of Gentiana rigescens from different geographical origins].

    PubMed

    Wang, Qin-Qin; Shen, Tao; Zuo, Zhi-Tian; Huang, Heng-Yu; Wang, Yuan-Zhong

    2018-03-01

    The accumulation of secondary metabolites of traditional Chinese medicine (TCM) is closely related to its origins. The identification of origins and multi-components quantitative evaluation are of great significance to ensure the quality of medicinal materials. In this study, the identification of Gentiana rigescens from different geographical origins was conducted by data fusion of Fourier transform infrared (FTIR) spectroscopy and high performance liquid chromatography (HPLC) in combination of partial least squares discriminant analysis; meanwhile quantitative analysis of index components was conducted to provide an accurate and comprehensive identification and quality evaluation strategy for selecting the best production areas of G. rigescens. In this study, the FTIR and HPLC information of 169 G. rigescens samples from Yunnan, Sichuan, Guangxi and Guizhou Provinces were collected. The raw infrared spectra were pre-treated by multiplicative scatter correction, standard normal variate (SNV) and Savitzky-Golay (SG) derivative. Then the performances of FTIR, HPLC, and low-level data fusion and mid-level data fusion for identification were compared, and the contents of gentiopicroside, swertiamarin, loganic acid and sweroside were determined by HPLC. The results showed that the FTIR spectra of G. rigescens from different geographical origins were different, and the best pre-treatment method was SNV+SG-derivative (second derivative, 15 as the window parameter, and 2 as the polynomial order). The results showed that the accuracy rate of low- and mid-level data fusion (96.43%) in prediction set was higher than that of FTIR and HPLC (94.64%) in prediction set. In addition, the accuracy of low-level data fusion (100%) in the training set was higher than that of mid-level data fusion (99.12%) in training set. The contents of the iridoid glycosides in Yunnan were the highest among different provinces. The average content of gentiopicroside, as a bioactive marker in Chinese pharmacopoeia, was 47.40 mg·g⁻¹, and the maximum was 79.83 mg·g⁻¹. The contents of loganic acid, sweroside and gentiopicroside in Yunnan were significantly different from other provinces ( P <0.05). In comparison of total content of iridoid glycosides in G. rigescens with different geographical origins in Yunnan, it was found that the amount of iridoid glycosides was higher in Eryuan Dali (68.59 mg·g⁻¹) and Yulong Lijiang (66.68 mg·g⁻¹), significantly higher than that in Wuding Chuxiong (52.99 mg·g⁻¹), Chengjiang Yuxi (52.29 mg·g⁻¹) and Xundian Kunming (46.71 mg·g⁻¹) ( P <0.05), so these two places can be used as a reference region for screening cultivation and excellent germplasm resources of G. rigescens. A comprehensive and accurate method was established by data fusion of HPLC-FTIR and quantitative analysis of HPLC for identification and quality evaluation of G. rigescens, which could provide a support for the development and utilization of G. rigescens. Copyright© by the Chinese Pharmaceutical Association.

  13. Isotopic Determination of Region of Origin in Modern Peoples: Applications for Identification of U.S. War-Dead From the Vietnam Conflict

    DTIC Science & Technology

    2006-08-01

    corn increased, but corn -based snacks such as popcorn, chips, and sodas/colas sweetened with high - fructose corn syrup are essentially a staple of...Identification Laboratory (JPAC-CIL). The identification of unknown remains believed to be missing U.S. service personnel is frequently hampered by high ...the collagen in dentin, because of its high nitrogen content, primarily mirrors the protein content of the diet (van der Merwe 1982, Harrison and

  14. Recovery of Mycobacterium lentiflavum from bronchial lavage during follow-up of an extrapulmonary tuberculosis patient.

    PubMed

    Vise, Esther; Mawlong, Michael; Garg, Akshay; Sen, Arnab; Shakuntala, Ingudam; Das, Samir

    2017-01-01

    Initially diagnosed with cervical lymphadenitis, a 15-year-old boy was started with category I anti-tuberculosis (TB) drugs. Follow-up investigations led to isolation and identification of Mycobacterium lentiflavum by multiple diagnostic and identification approaches. Observation of this rare pathogen from human origin urges cautious diagnosis while attending TB cases.

  15. Vibrational microspectroscopic identification of powdered traditional medicines: Chemical micromorphology of Poria observed by infrared and Raman microspectroscopy

    NASA Astrophysics Data System (ADS)

    Chen, Jian-bo; Sun, Su-qin; Ma, Fang; Zhou, Qun

    2014-07-01

    Microscopic identification using optical microscopes is a simple and effective method to identify powdered traditional medicines made from plants, animals and fungi. Sometimes, the criteria based on physical properties of the microscopic characteristics of drug powder may be ambiguous, which makes the microscopic identification method subjective and empirical to some extent. In this research, the vibrational microspectroscopic identification method is proposed for more explicit discrimination of powdered traditional medicines. The chemical micromorphology, i.e., chemical compositions and related physical morphologies, of the drug powder can be profiled objectively and quantitatively by infrared and Raman microspectroscopy, leading to better understanding about the formation mechanisms of microscopic characteristics and more accurate identification criteria. As an example, the powder of Poria, which is one of the most used traditional Chinese medicines, is studied in this research. Three types of hyphae are classified according to their infrared spectral features in the region from 1200 to 900 cm-1. Different kinds of polysaccharides indicate that these hyphae may be in different stages of the growth. The granular and branched clumps observed by the optical microscope may be formed from the aggregation of the mature hyphae with β-D-glucan reserves. The newfound spherical particles may originate from the exuded droplets in the fresh Poria because they are both composed of α-D-glucan. The results are helpful to understand the development of the hyphae and the formation of active polysaccharides in Poria and to establish accurate microspectroscopic identification criteria.

  16. Image features dependant correlation-weighting function for efficient PRNU based source camera identification.

    PubMed

    Tiwari, Mayank; Gupta, Bhupendra

    2018-04-01

    For source camera identification (SCI), photo response non-uniformity (PRNU) has been widely used as the fingerprint of the camera. The PRNU is extracted from the image by applying a de-noising filter then taking the difference between the original image and the de-noised image. However, it is observed that intensity-based features and high-frequency details (edges and texture) of the image, effect quality of the extracted PRNU. This effects correlation calculation and creates problems in SCI. For solving this problem, we propose a weighting function based on image features. We have experimentally identified image features (intensity and high-frequency contents) effect on the estimated PRNU, and then develop a weighting function which gives higher weights to image regions which give reliable PRNU and at the same point it gives comparatively less weights to the image regions which do not give reliable PRNU. Experimental results show that the proposed weighting function is able to improve the accuracy of SCI up to a great extent. Copyright © 2018 Elsevier B.V. All rights reserved.

  17. The effects of verbal descriptions on performance in lineups and showups.

    PubMed

    Wilson, Brent M; Seale-Carlisle, Travis M; Mickes, Laura

    2018-01-01

    Verbally describing a face has been found to impair subsequent recognition of that face from a photo lineup, a phenomenon known as the verbal overshadowing effect (Schooler & Engstler-Schooler, 1990). Recently, a large direct replication study successfully reproduced that original finding (Alogna et al., 2014). However, in both the original study and the replication studies, memory was tested using only target-present lineups (i.e., lineups containing the previously seen target face), making it possible to compute the correct identification rate (correct ID rate; i.e., the hit rate) but not the false identification rate (false ID rate; i.e., the false alarm rate). Thus, the lower correct ID rate for the verbal condition could reflect either reduced discriminability or a conservative criterion shift relative to the control condition. In four verbal overshadowing experiments reported here, we measured both correct ID rates and false ID rates using photo lineups (Experiments 1 and 2) or single-photo showups (Experiments 3 and 4). The experimental manipulation (verbally describing the face or not) occurred either immediately after encoding (Experiments 1 and 3) or 20-min after encoding (Experiments 2 and 4). In the immediate condition, discriminability did not differ between groups, but in the delayed condition, discriminability was lower in the verbal description group (i.e., a verbal overshadowing effect was observed). A fifth experiment found that the effect of the immediate-versus-delayed manipulation may be attributable to a change in the content of verbal descriptions, with the ratio of diagnostic to generic facial features in the descriptions decreasing as delay increases. (PsycINFO Database Record (c) 2018 APA, all rights reserved).

  18. Cosmic physics data analysis program

    NASA Technical Reports Server (NTRS)

    Wilkes, R. Jeffrey

    1993-01-01

    A data analysis program was carried out to investigate the intensity, propagation, and origin of primary Cosmic Ray Galactic electrons. Scanning was carried out on two new balloon flight experiments as well as the border area of previous experiments. The identification and evaluation of the energies of the primary electrons were carried out. A new analysis of these data were incorporated into an overall evaluation of the roll of electrons in the problem of the origin of cosmic rays. Recent measurements indicate that the earth may be within the expanding Geminga supernova shock wave which is expected to have a major effect upon the propagation and the energy spectrum of galactic electrons. Calculations with the Geminga model indicate that the cut-off energy may be very close to the observed highest energy electrons in our analysis.

  19. The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes

    USDA-ARS?s Scientific Manuscript database

    Phytophthora infestans is a destructive plant pathogen best known for causing the disease that triggered the Irish potato famine and continues to be the most costly potato pathogen to manage worldwide. Identification of its elusive center of origin is critical to understanding the mechanisms of repe...

  20. Application of infrared spectroscopy and pyrolysis gas chromatography for characterisation of adhesive tapes

    NASA Astrophysics Data System (ADS)

    Zięba-Palus, Janina; Nowińska, Sabina; Kowalski, Rafał

    2016-12-01

    Infrared spectroscopy and pyrolysis GC/MS were applied in the comparative analysis of adhesive tapes. By providing information about the polymer composition, it was possible to classify both backings and adhesives of tapes into defined chemical classes. It was found that samples of the same type (of backings and adhesives) and similar infrared spectra can in most cases be effectively differentiated using Py-GC/MS, sometimes based only on the presence of peaks of very low intensity originating from minor components. The results obtained enabled us to draw the conclusion that Py-GC/MS appears to be a valuable analytical technique for examining tapes, which is complementary to infrared spectroscopy. Identification of pyrolysis products enables discrimination of samples. Both methods also provide crucial information that is useful for identification of adhesive tapes found at the crime scene.

  1. Building face composites can harm lineup identification performance.

    PubMed

    Wells, Gary L; Charman, Steve D; Olson, Elizabeth A

    2005-09-01

    Face composite programs permit eyewitnesses to build likenesses of target faces by selecting facial features and combining them into an intact face. Research has shown that these composites are generally poor likenesses of the target face. Two experiments tested the proposition that this composite-building process could harm the builder's memory for the face. In Experiment 1 (n = 150), the authors used 50 different faces and found that the building of a composite reduced the chances that the person could later identify the original face from a lineup when compared with no composite control conditions or with yoked composite-exposure control conditions. In Experiment 2 (n = 200), the authors found that this effect generalized to a simulated-crime video, but mistaken identifications from target-absent lineups were not inflated by composite building. Copyright 2005 APA, all rights reserved.

  2. Identification of milk origin and process-induced changes in milk by stable isotope ratio mass spectrometry.

    PubMed

    Scampicchio, Matteo; Mimmo, Tanja; Capici, Calogero; Huck, Christian; Innocente, Nadia; Drusch, Stephan; Cesco, Stefano

    2012-11-14

    Stable isotope values were used to develop a new analytical approach enabling the simultaneous identification of milk samples either processed with different heating regimens or from different geographical origins. The samples consisted of raw, pasteurized (HTST), and ultrapasteurized (UHT) milk from different Italian origins. The approach consisted of the analysis of the isotope ratio of δ¹³C and δ¹⁵N for the milk samples and their fractions (fat, casein, and whey). The main finding of this work is that as the heat processing affects the composition of the milk fractions, changes in δ¹³C and δ¹⁵N were also observed. These changes were used as markers to develop pattern recognition maps based on principal component analysis and supervised classification models, such as linear discriminant analysis (LDA), multivariate regression (MLR), principal component regression (PCR), and partial least-squares (PLS). The results give proof of the concept that isotope ratio mass spectroscopy can discriminate simultaneously between milk samples according to their geographical origin and type of processing.

  3. Direct Identification of Dilute Surface Spins on Al2 O3 : Origin of Flux Noise in Quantum Circuits

    NASA Astrophysics Data System (ADS)

    de Graaf, S. E.; Adamyan, A. A.; Lindström, T.; Erts, D.; Kubatkin, S. E.; Tzalenchuk, A. Ya.; Danilov, A. V.

    2017-02-01

    An on-chip electron spin resonance technique is applied to reveal the nature and origin of surface spins on Al2 O3 . We measure a spin density of 2.2 ×1 017 spins/m2 , attributed to physisorbed atomic hydrogen and S =1 /2 electron spin states on the surface. This is direct evidence for the nature of spins responsible for flux noise in quantum circuits, which has been an issue of interest for several decades. Our findings open up a new approach to the identification and controlled reduction of paramagnetic sources of noise and decoherence in superconducting quantum devices.

  4. Unique Association of Rare Cardiovascular Disease in an Athlete With Ventricular Arrhythmias.

    PubMed

    Santomauro, V; Contursi, M; Dellegrottaglie, S; Borsellino, G

    2015-01-01

    Ventricular arrhythmias are a leading cause of non-elegibility to competitive sport. The failure to detect a significant organic substrate in the initial stage of screening does not preclude the identification of structural pathologies in the follow-up by using advanced imaging techniques. Here we report the case of a senior athlete judged not elegible because an arrhythmia with the morphology consistent with the origin of the left ventricle, in which subsequent execution of a cardiac MR and a thoracic CT scan has allowed the identification of an unique association between an area of myocardial damage, probable site of origine of the arrhythma, and a rare aortic malformation.

  5. Improving the Efficiency and Effectiveness of Community Detection via Prior-Induced Equivalent Super-Network.

    PubMed

    Yang, Liang; Jin, Di; He, Dongxiao; Fu, Huazhu; Cao, Xiaochun; Fogelman-Soulie, Francoise

    2017-03-29

    Due to the importance of community structure in understanding network and a surge of interest aroused on community detectability, how to improve the community identification performance with pairwise prior information becomes a hot topic. However, most existing semi-supervised community detection algorithms only focus on improving the accuracy but ignore the impacts of priors on speeding detection. Besides, they always require to tune additional parameters and cannot guarantee pairwise constraints. To address these drawbacks, we propose a general, high-speed, effective and parameter-free semi-supervised community detection framework. By constructing the indivisible super-nodes according to the connected subgraph of the must-link constraints and by forming the weighted super-edge based on network topology and cannot-link constraints, our new framework transforms the original network into an equivalent but much smaller Super-Network. Super-Network perfectly ensures the must-link constraints and effectively encodes cannot-link constraints. Furthermore, the time complexity of super-network construction process is linear in the original network size, which makes it efficient. Meanwhile, since the constructed super-network is much smaller than the original one, any existing community detection algorithm is much faster when using our framework. Besides, the overall process will not introduce any additional parameters, making it more practical.

  6. Identification of serial number on bank card using recurrent neural network

    NASA Astrophysics Data System (ADS)

    Liu, Li; Huang, Linlin; Xue, Jian

    2018-04-01

    Identification of serial number on bank card has many applications. Due to the different number printing mode, complex background, distortion in shape, etc., it is quite challenging to achieve high identification accuracy. In this paper, we propose a method using Normalization-Cooperated Gradient Feature (NCGF) and Recurrent Neural Network (RNN) based on Long Short-Term Memory (LSTM) for serial number identification. The NCGF maps the gradient direction elements of original image to direction planes such that the RNN with direction planes as input can recognize numbers more accurately. Taking the advantages of NCGF and RNN, we get 90%digit string recognition accuracy.

  7. Identification and geochemical significance of sulphurized fatty acids in sedimentary organic matter from the Lorca Basin, SE Spain

    NASA Astrophysics Data System (ADS)

    Russell, Marie; Hartgers, Walter A.; Grimalt, Joan O.

    2000-11-01

    The presence of free sulphurized fatty acids in various sediment types (carbonates, marls, organic-rich shales) of the Messinian of the Lorca Basin, SE Spain, is reported. These compounds are found in the majority, but not all, of the samples from this basin which also contain sulphur-bound hydrocarbons. They constitute mixtures of C 16-C 26 linear fatty acids predominated by the C 18 homologues with thiophene, thiolane, and thiane rings attached at various chain positions, with the most abundant isomers being those with ring substitution at position C-9. The dominance of these isomers points to an early sulphurization process involving octadec-9,12-dienoic acid and/or octadeca-9-enoic acid, major lipid constituents of algae. In general, the alkylthiophene fatty acids are more abundant than the alkylthiolane or alkylthiane fatty acids. The presence of the sulphur moiety and structural identification was confirmed by GC-HRMS and by desulphurization of the fatty acid fraction. Desulphurization also showed that a portion of the sulphur containing fatty acids is intermolecularly bound to the polymeric organic matter. The samples exhibiting higher proportions of macromolecularly bound fatty acids were also those showing higher abundances of alkylthiolane or alkylthiane fatty acids. The identification of these compounds shows that the original algal lipids, including the fatty acid pool, can be effectively preserved in sedimentary samples by sulphurization. However, sulphur-bonding only occurs by addition to the unsaturated carbons. Thus, only unsaturated fatty acids are preserved, constituting a major bias in terms of the original sedimentary distributions.

  8. [The Identification of the Origin of Chinese Wolfberry Based on Infrared Spectral Technology and the Artificial Neural Network].

    PubMed

    Li, Zhong; Liu, Ming-de; Ji, Shou-xiang

    2016-03-01

    The Fourier Transform Infrared Spectroscopy (FTIR) is established to find the geographic origins of Chinese wolfberry quickly. In the paper, the 45 samples of Chinese wolfberry from different places of Qinghai Province are to be surveyed by FTIR. The original data matrix of FTIR is pretreated with common preprocessing and wavelet transform. Compared with common windows shifting smoothing preprocessing, standard normal variation correction and multiplicative scatter correction, wavelet transform is an effective spectrum data preprocessing method. Before establishing model through the artificial neural networks, the spectra variables are compressed by means of the wavelet transformation so as to enhance the training speed of the artificial neural networks, and at the same time the related parameters of the artificial neural networks model are also discussed in detail. The survey shows even if the infrared spectroscopy data is compressed to 1/8 of its original data, the spectral information and analytical accuracy are not deteriorated. The compressed spectra variables are used for modeling parameters of the backpropagation artificial neural network (BP-ANN) model and the geographic origins of Chinese wolfberry are used for parameters of export. Three layers of neural network model are built to predict the 10 unknown samples by using the MATLAB neural network toolbox design error back propagation network. The number of hidden layer neurons is 5, and the number of output layer neuron is 1. The transfer function of hidden layer is tansig, while the transfer function of output layer is purelin. Network training function is trainl and the learning function of weights and thresholds is learngdm. net. trainParam. epochs=1 000, while net. trainParam. goal = 0.001. The recognition rate of 100% is to be achieved. It can be concluded that the method is quite suitable for the quick discrimination of producing areas of Chinese wolfberry. The infrared spectral analysis technology combined with the artificial neural networks is proved to be a reliable and new method for the identification of the original place of Traditional Chinese Medicine.

  9. Mexican-Origin Parents' Stress and Satisfaction: The Role of Emotional Support.

    PubMed

    Popp, Tierney K; Delgado, Melissa Y; Wheeler, Lorey A

    2018-01-24

    Guided by a process model of parenting and the integrative model, this study examined sources of emotional support (i.e., partner, maternal, paternal) as related to stress and satisfaction resulting from the parenting role in a sample of Mexican-origin young adult parents who participated in the National Longitudinal Study of Adolescent to Adult Health (Add Health) during Wave IV. Participants were male and female parents (26-35 years of age; 59% female; N = 737) who had children and a partner. Results from structural equation modeling revealed support from mothers as salient; high levels of maternal support were associated with high levels of parenting satisfaction. Tests of indirect effects suggested that parenting satisfaction played an intervening role in the link between maternal support and parenting stress. The pattern of results held across levels of linguistic acculturation but varied by gender. Understanding the mechanisms that predict parenting stress and satisfaction within the Mexican-origin population may help in the identification of culturally sensitive intervention strategies. © 2018 Family Process Institute.

  10. 36 CFR 1254.8 - What information do I need to provide when applying for a researcher identification card?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... other identification is not current. Students who consider the home of their parents as their permanent address, but who do not live there during the academic session, must provide their current student address. If you travel long distance to conduct research in original archival materials at a NARA facility, we...

  11. Identification of a nonsense mutation in APAF1 that is likely causal for a decrease in reproductive efficiency in Holstein dairy cattle

    USDA-ARS?s Scientific Manuscript database

    A haplotype on cattle chromosome 5 carrying a recessive lethal allele was found to originate in a Holstein-Friesian foundation sire. Resequencing led to the identification of a stop-gain mutation in exon 11 of APAF1, a gene known to cause embryonic lethality and neurodevelopmental abnormalities in ...

  12. Identification of Tunisian Leishmania spp. by PCR amplification of cysteine proteinase B (cpb) genes and phylogenetic analysis.

    PubMed

    Chaouch, Melek; Fathallah-Mili, Akila; Driss, Mehdi; Lahmadi, Ramzi; Ayari, Chiraz; Guizani, Ikram; Ben Said, Moncef; Benabderrazak, Souha

    2013-03-01

    Discrimination of the Old World Leishmania parasites is important for diagnosis and epidemiological studies of leishmaniasis. We have developed PCR assays that allow the discrimination between Leishmania major, Leishmania tropica and Leishmania infantum Tunisian species. The identification was performed by a simple PCR targeting cysteine protease B (cpb) gene copies. These PCR can be a routine molecular biology tools for discrimination of Leishmania spp. from different geographical origins and different clinical forms. Our assays can be an informative source for cpb gene studying concerning drug, diagnostics and vaccine research. The PCR products of the cpb gene and the N-acetylglucosamine-1-phosphate transferase (nagt) Leishmania gene were sequenced and aligned. Phylogenetic trees of Leishmania based cpb and nagt sequences are close in topology and present the classic distribution of Leishmania in the Old World. The phylogenetic analysis has enabled the characterization and identification of different strains, using both multicopy (cpb) and single copy (nagt) genes. Indeed, the cpb phylogenetic analysis allowed us to identify the Tunisian Leishmania killicki species, and a group which gathers the least evolved isolates of the Leishmania donovani complex, that was originated from East Africa. This clustering confirms the African origin for the visceralizing species of the L. donovani complex. Copyright © 2012 Elsevier B.V. All rights reserved.

  13. [Effect of core: dentin thickness ratio on the flexure strength of IPS Empress II heat-pressed all-ceramic restorative material].

    PubMed

    Liu, Yi-hong; Feng, Hai-lan; Bao, Yi-wang; Qiu, Yan

    2007-02-18

    To evaluate the effect of core:dentin thickness ratio on the flexure strength, fracture mode and origin of bilayered IPS Empress II ceramic composite specimens. IPS Empress II core ceramic, dentin porcelain and bilayered composite specimens with core:dentin thickness ratio of 2:1 and 1:1 were tested in three-point flexure strength. Mean strengths and standard deviations were determined. The optical microscopy was employed for identification of the fracture mode and origin. The flexure strength of dentin porcelain was the smallest(62.7 MPa), and the strength of bilayered composite specimens was smaller than single-layered core ceramic(190.2 MPa). The core: dentin ratio did not influence the strength of bilayered composite specimens. The frequency of occurrence of bilayered specimen delaminations was higher in the group of core: dentin thickness ratio of 1:1 than in the group of 2:1. IPS Empress II core ceramic was significantly stronger than veneering dentin porcelain. Core:dentin thickness ratio could significantly influence the fracture mode and origin, and bilayered IPS Empress II ceramic composite specimens showed little influence in the fracture strength.

  14. Identification of eggs from different production systems based on hyperspectra and CS-SVM.

    PubMed

    Sun, J; Cong, S L; Mao, H P; Zhou, X; Wu, X H; Zhang, X D

    2017-06-01

    1. To identify the origin of table eggs more accurately, a method based on hyperspectral imaging technology was studied. 2. The hyperspectral data of 200 samples of intensive and extensive eggs were collected. Standard normalised variables combined with a Savitzky-Golay were used to eliminate noise, then stepwise regression (SWR) was used for feature selection. Grid search algorithm (GS), genetic search algorithm (GA), particle swarm optimisation algorithm (PSO) and cuckoo search algorithm (CS) were applied by support vector machine (SVM) methods to establish an SVM identification model with the optimal parameters. The full spectrum data and the data after feature selection were the input of the model, while egg category was the output. 3. The SWR-CS-SVM model performed better than the other models, including SWR-GS-SVM, SWR-GA-SVM, SWR-PSO-SVM and others based on full spectral data. The training and test classification accuracy of the SWR-CS-SVM model were respectively 99.3% and 96%. 4. SWR-CS-SVM proved effective for identifying egg varieties and could also be useful for the non-destructive identification of other types of egg.

  15. Peer effects in risk aversion.

    PubMed

    Balsa, Ana I; Gandelman, Néstor; González, Nicolás

    2015-01-01

    We estimate peer effects in risk attitudes in a sample of high school students. Relative risk aversion is elicited from surveys administered at school. Identification of peer effects is based on parents not being able to choose the class within the school of their choice, and on the use of instrumental variables conditional on school-grade fixed effects. We find a significant and quantitatively large impact of peers' risk attitudes on a male individual's coefficient of risk aversion. Specifically, a one standard deviation increase in the group's coefficient of risk aversion increases an individual's risk aversion by 43%. Our findings shed light on the origin and stability of risk attitudes and, more generally, on the determinants of economic preferences. © 2014 Society for Risk Analysis.

  16. Identification of species origin of meat and meat products on the DNA basis: a review.

    PubMed

    Kumar, Arun; Kumar, Rajiv Ranjan; Sharma, Brahm Deo; Gokulakrishnan, Palanisamy; Mendiratta, Sanjod Kumar; Sharma, Deepak

    2015-01-01

    The adulteration/substitution of meat has always been a concern for various reasons such as public health, religious factors, wholesomeness, and unhealthy competition in meat market. Consumer should be protected from these malicious practices of meat adulterations by quick, precise, and specific identification of meat animal species. Several analytical methodologies have been employed for meat speciation based on anatomical, histological, microscopic, organoleptic, chemical, electrophoretic, chromatographic, or immunological principles. However, by virtue of their inherent limitations, most of these techniques have been replaced by the recent DNA-based molecular techniques. In the last decades, several methods based on polymerase chain reaction have been proposed as useful means for identifying the species origin in meat and meat products, due to their high specificity and sensitivity, as well as rapid processing time and low cost. This review intends to provide an updated and extensive overview on the DNA-based methods for species identification in meat and meat products.

  17. On the contribution of unconscious processes to recognition memory.

    PubMed

    Cleary, Anne M

    2012-01-01

    Abstract Voss et al. review work showing unconscious contributions to recognition memory. An electrophysiological effect, the N300, appears to signify an unconscious recognition process. Whether such unconscious recognition requires highly specific experimental circumstances or can occur in typical types of recognition testing situations has remained a question. The fact that the N300 has also been shown to be the sole electrophysiological correlate of the recognition-without-identification effect that occurs with visual word fragments suggests that unconscious processes may contribute to a wider range of recognition testing situations than those originally investigated by Voss and colleagues. Some implications of this possibility are discussed.

  18. Meta-analysis of aberrant lymphatic drainage in recurrent breast cancer.

    PubMed

    Ahmed, M; Baker, R; Rubio, I T

    2016-11-01

    Sentinel node biopsy (SNB) in recurrent breast cancer offers targeted axillary staging compared with axillary lymph node dissection (ALND) or no treatment. The evidence for lymphatic mapping in recurrent breast cancer is reviewed, focusing on aberrant drainage and its implications for patient management. A meta-analysis of studies evaluating lymphatic mapping in recurrent breast cancer was performed. Outcomes included sentinel node identification, aberrant lymphatic pathways and metastatic node rates in aberrant drainage and ipsilateral axilla. Pooled odds ratios (ORs) and 95 per cent confidence intervals (c.i.) were estimated using fixed-effect analyses, or random-effects analyses in the event of statistically significant heterogeneity. Seven studies reported data on lymphatic mapping in 1053 patients with recurrent breast cancer. The intraoperative sentinel node identification rate was 59·6 (95 per cent c.i. 56·7 to 62·6) per cent, and significantly greater when the original axillary surgery was SNB compared with ALND (OR 2·97, 95 per cent c.i. 1·66 to 5·32). The rate of aberrant lymphatic drainage identification was 25·7 (23·0 to 28·3) per cent, and significantly greater when the original axillary surgery was ALND (OR 0·27, 0·19 to 0·38). The metastatic sentinel node rate was 10·4 (8·6 to 12·3) per cent, and a significantly greater metastatic nodal burden was identified in the ipsilateral axilla (OR 6·31, 1·03 to 38·79). Lymphatic mapping is feasible in recurrent breast cancer. It avoids ALND in over 50 per cent of patients who have undergone SNB, and allows the 4 per cent of patients with metastatically involved aberrant nodes to receive targeted surgical and adjuvant therapies. © 2016 BJS Society Ltd Published by John Wiley & Sons Ltd.

  19. Exploring Attachment to the “Homeland” and Its Association with Heritage Culture Identification

    PubMed Central

    Ferenczi, Nelli; Marshall, Tara C.

    2013-01-01

    Conceptualisations of attachment to one's nation of origin reflecting a symbolic caregiver can be found cross-culturally in literature, art, and language. Despite its prevalence, the relationship with one's nation has not been investigated empirically in terms of an attachment theory framework. Two studies employed an attachment theory approach to investigate the construct validity of symbolic attachment to one's nation of origin, and its association with acculturation (operationalized as heritage and mainstream culture identification). Results for Study 1 indicated a three-factor structure of nation attachment; the factors were labelled secure-preoccupied, fearful, and dismissive nation attachment. Hierarchical linear modelling was employed to control for differing cultures across participants. Secure-preoccupied nation attachment was a significant predictor of increased heritage culture identification for participants residing in their country of birth, whilst dismissive nation attachment was a significant predictor of decreased heritage culture identification for international migrants. Secure-preoccupied nation attachment was also associated with higher levels of subjective-wellbeing. Study 2 further confirmed the validity of the nation attachment construct through confirmatory factor analysis; the three-factor model adequately fit the data. Similar to the results of Study 1, secure-preoccupied nation attachment was associated with increased levels of heritage culture identification and psychological well-being. Implications of the tripartite model of nation attachment for identity and well-being will be discussed. PMID:23372673

  20. Source identification of western Oregon Douglas-Fir wood cores using mass spectrometry and random forest Classification

    Treesearch

    Kristen Finch; Edgard Espinoza; F. Andrew Jones; Richard Cronn

    2017-01-01

    Premise of the study: We investigated whether wood metabolite profiles from direct analysis in real time (time-of-flight) mass spectrometry (DART-TOFMS) could be used to determine the geographic origin of Douglas-fir wood cores originating from two regions in western Oregon, USA. Methods: Three annual ring mass...

  1. The impact of organizational support and leader-member exchange on the work-related behaviour of nursing professionals: the moderating effect of professional and organizational identification.

    PubMed

    Trybou, Jeroen; Gemmel, Paul; Pauwels, Yarrid; Henninck, Charlene; Clays, Els

    2014-02-01

    The aim of this study was to examine the relations between perceived organizational support, the quality of leader-member exchange, in-role and extra-role behaviour, professional identification and organizational identification among registered nurses and nurse assistants. Theoretically, employees will reciprocate received beneficial treatment with positive attitudes and behaviour. Recently, it has been shown that this principle may be more complex than originally anticipated. A quantitative, cross-sectional survey design was used. The quality of social exchange and identification was scored by the involved registered nurses and nurse assistants; in-role and extra-role behaviour was rated by the head nurse. The survey was administered to nurses and nurse assistants (n = 196) working in five Belgian nursing homes. Data were collected from February-March 2012. Pearson correlation analyses, t-test analyses and hierarchical regression were used to analyse the data. Our results showed no relationship between perceived organizational support and leader-member exchange and in-role behaviour. A positive relationship was found between perceived organizational support and extra-role behaviour and a trend towards significance between leader-member exchange and extra-role behaviour. Organizational and professional identification moderated the relationship between perceived organizational support and extra-role behaviour. Our study demonstrates the importance of social exchange to nurses and nurse assistants and therefore nursing administrators and leaders. When registered nurses and nurse assistants perceive high-quality social exchange, they are more likely to go the extra mile on behalf of the organization. Fostering social identification could enhance this. © 2013 John Wiley & Sons Ltd.

  2. Use of amplitude modulation cues recovered from frequency modulation for cochlear implant users when original speech cues are severely degraded.

    PubMed

    Won, Jong Ho; Shim, Hyun Joon; Lorenzi, Christian; Rubinstein, Jay T

    2014-06-01

    Won et al. (J Acoust Soc Am 132:1113-1119, 2012) reported that cochlear implant (CI) speech processors generate amplitude-modulation (AM) cues recovered from broadband speech frequency modulation (FM) and that CI users can use these cues for speech identification in quiet. The present study was designed to extend this finding for a wide range of listening conditions, where the original speech cues were severely degraded by manipulating either the acoustic signals or the speech processor. The manipulation of the acoustic signals included the presentation of background noise, simulation of reverberation, and amplitude compression. The manipulation of the speech processor included changing the input dynamic range and the number of channels. For each of these conditions, multiple levels of speech degradation were tested. Speech identification was measured for CI users and compared for stimuli having both AM and FM information (intact condition) or FM information only (FM condition). Each manipulation degraded speech identification performance for both intact and FM conditions. Performance for the intact and FM conditions became similar for stimuli having the most severe degradations. Identification performance generally overlapped for the intact and FM conditions. Moreover, identification performance for the FM condition was better than chance performance even at the maximum level of distortion. Finally, significant correlations were found between speech identification scores for the intact and FM conditions. Altogether, these results suggest that despite poor frequency selectivity, CI users can make efficient use of AM cues recovered from speech FM in difficult listening situations.

  3. Identification of tissular origin of particles based on autofluorescence multispectral image analysis at the macroscopic scale

    NASA Astrophysics Data System (ADS)

    Corcel, Mathias; Devaux, Marie-Françoise; Guillon, Fabienne; Barron, Cécile

    2017-06-01

    Powders produced from plant materials are heterogeneous in relation to native plant heterogeneity, and during grinding, dissociation often occurred at the tissue scale. The tissue composition of powdery samples could be modified through dry fractionation diagrams and impact their end-uses properties. If tissue identification is often made on native plant structure, this characterization is not straightforward in destructured samples such powders. Taking advantage of the autofluorescence properties of cell wall components, multispectral image acquisition is envisioned to identify the tissular origin of particles. Images were acquired on maize stem sections and ground tissues isolated from the same stem by hand dissection. The variability in fluorescence intensity profiles was analysed using principal component analysis. The correspondence between fluorescence profiles and the different tissues observed in maize sections was assessed based on histology or known compositional heterogeneity. Similar variability was encountered in fluorescence profiles extracted from powder leading to the potential ability to predict tissular origin based on this autofluorescence multispectral signal.

  4. Radiation preservation of foods of plant origin. Part 1. Potatoes and other tuber crops

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Thomas, P.

    1984-01-01

    In Part 1 of a planned series of articles on preservation of foods of plant origin by gamma irradiation, the current state of research on the technological, nutritional, and biochemical aspects of sprout inhibition of potatoes and other tuber crops are reviewed. These include varietal responses, dose effects, time of irradiation, pre- and postirradiation storage, and handling requirements; postirradiation changes in carbohydrates, ascorbic acid, amino acids, and other nutrients; respiration; biochemical mechanisms involved in sprout inhibition; wound healing and microbial infection during storage; formation of wound and light-induced glycoalkaloids and identification of irradiated potatoes. The culinary and processing qualities withmore » particular reference to darkening of boiled and processed potatoes are discussed. The prospects of irradiation on an industrial scale as an alternative to chemical sprout inhibitors or mechanical refrigeration are considered.« less

  5. On the physical significance of the Effective Independence method for sensor placement

    NASA Astrophysics Data System (ADS)

    Jiang, Yaoguang; Li, Dongsheng; Song, Gangbing

    2017-05-01

    Optimally deploy sparse sensors for better damage identification and structural health monitoring is always a challenging task. The Effective Independence(EI) is one of the most influential sensor placement method and to be discussed in the paper. Specifically, the effect of the different weighting coefficients on the maximization of the Fisher information matrix(FIM) and the physical significance of the re-orthogonalization of modal shapes through QR decomposition in the EI method are addressed. By analyzing the widely used EI method, we found that the absolute identification space put forward along with the EI method is preferable to ensuring the maximization of the FIM, instead of the original EI coefficient which was post-multiolied by a weighting matrix. That is, deleting the row with the minimum EI coefficient can’t achieve the objective of maximizing the trace of FIM as initially conceived. Furthermore, we observed that in the computation of EI method, the sum of each retained row in the absolute identification space is a constant in each iteration. This potential property can be revealed distinctively by the product of target mode and its transpose, and its form is similar to an alternative formula of the EI method through orthogonal-triangular(QR) decomposition previously proposed by the authors. With it, the physical significance of re-orthogonalization of modal shapes through QR decomposition in the computation of EI method can be obviously manifested from a new perspective. Finally, two simple examples are provided to demonstrate the above two observations.

  6. 47 CFR 74.780 - Broadcast regulations applicable to translators, low power, and booster stations.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... TV translator, low power TV, and TV booster stations: Section 73.653—Operation of TV aural and visual... stations locally originating programming as defined by § 74.701(h)). Section 73.1201—Station identification (for low power TV stations locally originating programming as defined by § 74.701(h)). Section 73.1206...

  7. Principal opium alkaloids as possible biochemical markers for the source identification of Indian opium.

    PubMed

    Mohana, Mudiam; Reddy, Krishna; Jayshanker, Gurumurthy; Suresh, Velayudhan; Sarin, Rajendra Kumar; Sashidhar, R B

    2005-08-01

    A total of 124 opium samples originating from different licit opium growing divisions of India were analyzed for their principal alkaloid (thebaine, codeine, morphine, papaverine, and narcotine) content by capillary zone electrophoresis (CZE) without derivatization or purification. Absence of papaverine in Bareilly, Tilhar, and most of the samples originating from Kota is a significant observation in relation to the source of Indian opium. Multiple discriminant analysis was applied to the quantitative principal alkaloid data to determine an optimal classifier in order to evaluate the source of Indian opium. The predictive value based on the discriminant analysis was found to be 85% in relation to the source of opium and the study also revealed that all the principal alkaloids have to be analyzed for source identification of Indian opium. Chemometrics performed with principal alkaloids analytical data was used successfully in discriminating the licit opium growing divisions of India into three major groups, viz., group I, II, and III. The methodology developed may find wide forensic application in identifying the source of licit or illicit opium originating from India, and to differentiate it from opium originating from other opium producing countries.

  8. Computed Tomography Image Origin Identification Based on Original Sensor Pattern Noise and 3-D Image Reconstruction Algorithm Footprints.

    PubMed

    Duan, Yuping; Bouslimi, Dalel; Yang, Guanyu; Shu, Huazhong; Coatrieux, Gouenou

    2017-07-01

    In this paper, we focus on the "blind" identification of the computed tomography (CT) scanner that has produced a CT image. To do so, we propose a set of noise features derived from the image chain acquisition and which can be used as CT-scanner footprint. Basically, we propose two approaches. The first one aims at identifying a CT scanner based on an original sensor pattern noise (OSPN) that is intrinsic to the X-ray detectors. The second one identifies an acquisition system based on the way this noise is modified by its three-dimensional (3-D) image reconstruction algorithm. As these reconstruction algorithms are manufacturer dependent and kept secret, our features are used as input to train a support vector machine (SVM) based classifier to discriminate acquisition systems. Experiments conducted on images issued from 15 different CT-scanner models of 4 distinct manufacturers demonstrate that our system identifies the origin of one CT image with a detection rate of at least 94% and that it achieves better performance than sensor pattern noise (SPN) based strategy proposed for general public camera devices.

  9. Final Report - Advanced Ion Trap Mass Spectrometry Program - Oak Ridge National Laboratory - Sandia National Laboratory

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Whitten, W.B.

    This report covers the three main projects that collectively comprised the Advanced Ion Trap Mass Spectrometry Program. Chapter 1 describes the direct interrogation of individual particles by laser desorption within the ion trap mass spectrometer analyzer. The goals were (1) to develop an ''intelligent trigger'' capable of distinguishing particles of biological origin from those of nonbiological origin in the background and interferent particles and (2) to explore the capability for individual particle identification. Direct interrogation of particles by laser ablation and ion trap mass spectrometry was shown to have good promise for discriminating between particles of biological origin and thosemore » of nonbiological origin, although detailed protocols and operating conditions were not worked out. A library of more than 20,000 spectra of various types of biological particles has been assembled. Methods based on multivariate analysis and on neural networks were used to discriminate between particles of biological origin and those of nonbiological origin. It was possible to discriminate between at least some species of bacteria if mass spectra of several hundred similar particles were obtained. Chapter 2 addresses the development of a new ion trap mass analyzer geometry that offers the potential for a significant increase in ion storage capacity for a given set of analyzer operating conditions. This geometry may lead to the development of smaller, lower-power field-portable ion trap mass spectrometers while retaining laboratory-scale analytical performance. A novel ion trap mass spectrometer based on toroidal ion storage geometry has been developed. The analyzer geometry is based on the edge rotation of a quadrupolar ion trap cross section into the shape of a torus. Initial performance of this device was poor, however, due to the significant contribution of nonlinear fields introduced by the rotation of the symmetric ion-trapping geometry. These nonlinear resonances contributed to poor mass resolution and sensitivity and to erratic ion ejection behavior. To correct for these nonlinear effects, the geometry of the toroid ion trap analyzer has been modified to create an asymmetric torus, as first suggested by computer simulations that predicted significantly improved performance and unit mass resolution for this geometry. A reduced-sized version (one-fifth scale) has been fabricated but was not tested within the scope of this project. Chapter 3 describes groundbreaking progress toward the use of ion-ion chemistry to control the charge state of ions formed by the electrospray ionization process, which in turn enables precision analysis of whole proteins. In addition, this technique may offer the unique possibility of a priori identification of unknown biological material when employed with existing proteomics and genomic databases. Ion-ion chemistry within the ion trap was used to reduce the ions in highly charged states to states of +1 and +2 charges. Reduction in charge greatly simplifies identification of molecular weights of fragments from large biological molecules. This technique enables the analysis of whole proteins as biomarkers for the detection and identification of all three classes of biological weapons (bacteria, toxins, and viruses). In addition to methods development, tests were carried out with samples of tap water, local creek water, and soil (local red clay) spiked with melittin (bee venom), cholera toxin, and virus MS2. All three analytes were identified in tap water and soil; however, all three were problematic for detection in creek water at concentrations of 1 nM. More development of methods is needed.« less

  10. DNA Barcoding of the Endangered Aquilaria (Thymelaeaceae) and Its Application in Species Authentication of Agarwood Products Traded in the Market

    PubMed Central

    Lee, Shiou Yih; Ng, Wei Lun; Mahat, Mohd Noor; Nazre, Mohd; Mohamed, Rozi

    2016-01-01

    The identification of Aquilaria species from their resinous non-wood product, the agarwood, is challenging as conventional techniques alone are unable to ascertain the species origin. Aquilaria is a highly protected species due to the excessive exploitation of its precious agarwood. Here, we applied the DNA barcoding technique to generate barcode sequences for Aquilaria species and later applied the barcodes to identify the source species of agarwood found in the market. We developed a reference DNA barcode library using eight candidate barcode loci (matK, rbcL, rpoB, rpoC1, psbA-trnH, trnL-trnF, ITS, and ITS2) amplified from 24 leaf accessions of seven Aquilaria species obtained from living trees. Our results indicated that all single barcodes can be easily amplified and sequenced with the selected primers. The combination of trnL-trnF+ITS and trnL-trnF+ITS2 yielded the greatest species resolution using the least number of loci combination, while matK+trnL-trnF+ITS showed potential in detecting the geographical origins of Aquilaria species. We propose trnL-trnF+ITS2 as the best candidate barcode for Aquilaria as ITS2 has a shorter sequence length compared to ITS, which eases PCR amplification especially when using degraded DNA samples such as those extracted from processed agarwood products. A blind test conducted on eight agarwood samples in different forms using the proposed barcode combination proved successful in their identification up to the species level. Such potential of DNA barcoding in identifying the source species of agarwood will contribute to the international timber trade control, by providing an effective method for species identification and product authentication. PMID:27128309

  11. Identification of Mycobacterium spp. of veterinary importance using rpoB gene sequencing

    PubMed Central

    2011-01-01

    Background Studies conducted on Mycobacterium spp. isolated from human patients indicate that sequencing of a 711 bp portion of the rpoB gene can be useful in assigning a species identity, particularly for members of the Mycobacterium avium complex (MAC). Given that MAC are important pathogens in livestock, companion animals, and zoo/exotic animals, we were interested in evaluating the use of rpoB sequencing for identification of Mycobacterium isolates of veterinary origin. Results A total of 386 isolates, collected over 2008 - June 2011 from 378 animals (amphibians, reptiles, birds, and mammals) underwent PCR and sequencing of a ~ 711 bp portion of the rpoB gene; 310 isolates (80%) were identified to the species level based on similarity at ≥ 98% with a reference sequence. The remaining 76 isolates (20%) displayed < 98% similarity with reference sequences and were assigned to a clade based on their location in a neighbor-joining tree containing reference sequences. For a subset of 236 isolates that received both 16S rRNA and rpoB sequencing, 167 (70%) displayed a similar species/clade assignation for both sequencing methods. For the remaining 69 isolates, species/clade identities were different with each sequencing method. Mycobacterium avium subsp. hominissuis was the species most frequently isolated from specimens from pigs, cervids, companion animals, cattle, and exotic/zoo animals. Conclusions rpoB sequencing proved useful in identifying Mycobacterium isolates of veterinary origin to clade, species, or subspecies levels, particularly for assemblages (such as the MAC) where 16S rRNA sequencing alone is not adequate to demarcate these taxa. rpoB sequencing can represent a cost-effective identification tool suitable for routine use in the veterinary diagnostic laboratory. PMID:22118247

  12. Polyphasic approach to the identification and characterization of aflatoxigenic strains of Aspergillus section Flavi isolated from peanuts and peanut-based products marketed in Malaysia.

    PubMed

    Norlia, M; Jinap, S; Nor-Khaizura, M A R; Son, R; Chin, C K; Sardjono

    2018-05-31

    Peanuts are widely consumed as the main ingredient in many local dishes in Malaysia. However, the tropical climate in Malaysia (high temperature and humidity) favours the growth of fungi from Aspergillus section Flavi, especially during storage. Most of the species from this section, such as A. flavus, A. parasiticus and A. nomius, are natural producers of aflatoxins. Precise identification of local isolates and information regarding their ability to produce aflatoxins are very important to evaluate the safety of food marketed in Malaysia. Therefore, this study aimed to identify and characterize the aflatoxigenic and non-aflatoxigenic strains of Aspergillus section Flavi in peanuts and peanut-based products. A polyphasic approach, consisting of morphological and chemical characterizations was applied to 128 isolates originating from raw peanuts and peanut-based products. On the basis of morphological characters, 127 positively identified as Aspergillus flavus, and the other as A. nomius. Chemical characterization revealed six chemotype profiles which indicates diversity of toxigenic potential. About 58.6%, 68.5%, and 100% of the isolates are positive for aflatoxins, cyclopiazonic acid and aspergillic acid productions respectively. The majority of the isolates originating from raw peanut samples (64.8%) were aflatoxigenic, while those from peanut-based products were less toxigenic (39.1%). The precise identification of these species may help in developing control strategies for aflatoxigenic fungi and aflatoxin contamination in peanuts, especially during storage. These findings also highlight the possibility of the co-occurrence of other toxins, which could increase the potential toxic effects of peanuts. Copyright © 2018. Published by Elsevier B.V.

  13. Contaminant source identification using semi-supervised machine learning

    NASA Astrophysics Data System (ADS)

    Vesselinov, Velimir V.; Alexandrov, Boian S.; O'Malley, Daniel

    2018-05-01

    Identification of the original groundwater types present in geochemical mixtures observed in an aquifer is a challenging but very important task. Frequently, some of the groundwater types are related to different infiltration and/or contamination sources associated with various geochemical signatures and origins. The characterization of groundwater mixing processes typically requires solving complex inverse models representing groundwater flow and geochemical transport in the aquifer, where the inverse analysis accounts for available site data. Usually, the model is calibrated against the available data characterizing the spatial and temporal distribution of the observed geochemical types. Numerous different geochemical constituents and processes may need to be simulated in these models which further complicates the analyses. In this paper, we propose a new contaminant source identification approach that performs decomposition of the observation mixtures based on Non-negative Matrix Factorization (NMF) method for Blind Source Separation (BSS), coupled with a custom semi-supervised clustering algorithm. Our methodology, called NMFk, is capable of identifying (a) the unknown number of groundwater types and (b) the original geochemical concentration of the contaminant sources from measured geochemical mixtures with unknown mixing ratios without any additional site information. NMFk is tested on synthetic and real-world site data. The NMFk algorithm works with geochemical data represented in the form of concentrations, ratios (of two constituents; for example, isotope ratios), and delta notations (standard normalized stable isotope ratios).

  14. Contaminant source identification using semi-supervised machine learning

    DOE PAGES

    Vesselinov, Velimir Valentinov; Alexandrov, Boian S.; O’Malley, Dan

    2017-11-08

    Identification of the original groundwater types present in geochemical mixtures observed in an aquifer is a challenging but very important task. Frequently, some of the groundwater types are related to different infiltration and/or contamination sources associated with various geochemical signatures and origins. The characterization of groundwater mixing processes typically requires solving complex inverse models representing groundwater flow and geochemical transport in the aquifer, where the inverse analysis accounts for available site data. Usually, the model is calibrated against the available data characterizing the spatial and temporal distribution of the observed geochemical types. Numerous different geochemical constituents and processes may needmore » to be simulated in these models which further complicates the analyses. In this paper, we propose a new contaminant source identification approach that performs decomposition of the observation mixtures based on Non-negative Matrix Factorization (NMF) method for Blind Source Separation (BSS), coupled with a custom semi-supervised clustering algorithm. Our methodology, called NMFk, is capable of identifying (a) the unknown number of groundwater types and (b) the original geochemical concentration of the contaminant sources from measured geochemical mixtures with unknown mixing ratios without any additional site information. NMFk is tested on synthetic and real-world site data. Finally, the NMFk algorithm works with geochemical data represented in the form of concentrations, ratios (of two constituents; for example, isotope ratios), and delta notations (standard normalized stable isotope ratios).« less

  15. Contaminant source identification using semi-supervised machine learning

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vesselinov, Velimir Valentinov; Alexandrov, Boian S.; O’Malley, Dan

    Identification of the original groundwater types present in geochemical mixtures observed in an aquifer is a challenging but very important task. Frequently, some of the groundwater types are related to different infiltration and/or contamination sources associated with various geochemical signatures and origins. The characterization of groundwater mixing processes typically requires solving complex inverse models representing groundwater flow and geochemical transport in the aquifer, where the inverse analysis accounts for available site data. Usually, the model is calibrated against the available data characterizing the spatial and temporal distribution of the observed geochemical types. Numerous different geochemical constituents and processes may needmore » to be simulated in these models which further complicates the analyses. In this paper, we propose a new contaminant source identification approach that performs decomposition of the observation mixtures based on Non-negative Matrix Factorization (NMF) method for Blind Source Separation (BSS), coupled with a custom semi-supervised clustering algorithm. Our methodology, called NMFk, is capable of identifying (a) the unknown number of groundwater types and (b) the original geochemical concentration of the contaminant sources from measured geochemical mixtures with unknown mixing ratios without any additional site information. NMFk is tested on synthetic and real-world site data. Finally, the NMFk algorithm works with geochemical data represented in the form of concentrations, ratios (of two constituents; for example, isotope ratios), and delta notations (standard normalized stable isotope ratios).« less

  16. Fractography, NDE, and fracture mechanics applications in failure analysis studies

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Morin, C.R.; Shipley, R.J.; Wilkinson, J.A.

    1994-10-01

    While identification of the precise mode of a failure can lead logically to the underlying cause, a thorough failure investigation requires much more than just the identification of a specific metallurgical mechanism, for example, fatigue, creep, stress corrosion cracking, etc. Failures involving fracture provide good illustrations of this concept. An initial step in characterizing fracture surfaces is often the identification of an origin or origins. However, the analysis should not stop there. If the origin is associated with a discontinuity, the manner in which it was formed must also be addressed. The stresses that would have existed at the originmore » must be determined and compared with material properties to determine whether or not a crack should have initiated and propagated during normal operation. Many critical components are inspected throughout their lives by nondestructive methods. When a crack progresses to failure, its nondetection at earlier inspections must also be understood. Careful study of the fracture surface combined with crack growth analysis based on fracture mechanics can provide an estimate of the crack length at the times of previous inspections. An important issue often overlooked in such studies is how processing of parts during manufacture or rework affects the probability of detection of such cracks. The ultimate goal is to understand thoroughly the progression of the failure, to understand the root cause(s), and to design appropriate corrective action(s) to minimize recurrence.« less

  17. Identification of Corynebacterium amycolatum and other nonlipophilic fermentative corynebacteria of human origin.

    PubMed

    Wauters, G; Van Bosterhaut, B; Janssens, M; Verhaegen, J

    1998-05-01

    Four identification tests, proposed in addition to conventional methods, were evaluated with 320 fermentative nonlipophilic Corynebacterium strains: growth at 20 degrees C, glucose fermentation at 42 degrees C, alkalinization of sodium formate, and acid production from ethylene glycol. These tests were highly discriminant. Corynebacterium amycolatum displayed a unique profile, allowing it to be distinguished from similar species, such as C. xerosis, C. striatum, and C. minutissimum.

  18. Influence of Geographical Origin and Flour Type on Diversity of Lactic Acid Bacteria in Traditional Belgian Sourdoughs▿ †

    PubMed Central

    Scheirlinck, Ilse; Van der Meulen, Roel; Van Schoor, Ann; Vancanneyt, Marc; De Vuyst, Luc; Vandamme, Peter; Huys, Geert

    2007-01-01

    A culture-based approach was used to investigate the diversity of lactic acid bacteria (LAB) in Belgian traditional sourdoughs and to assess the influence of flour type, bakery environment, geographical origin, and technological characteristics on the taxonomic composition of these LAB communities. For this purpose, a total of 714 LAB from 21 sourdoughs sampled at 11 artisan bakeries throughout Belgium were subjected to a polyphasic identification approach. The microbial composition of the traditional sourdoughs was characterized by bacteriological culture in combination with genotypic identification methods, including repetitive element sequence-based PCR fingerprinting and phenylalanyl-tRNA synthase (pheS) gene sequence analysis. LAB from Belgian sourdoughs belonged to the genera Lactobacillus, Pediococcus, Leuconostoc, Weissella, and Enterococcus, with the heterofermentative species Lactobacillus paralimentarius, Lactobacillus sanfranciscensis, Lactobacillus plantarum, and Lactobacillus pontis as the most frequently isolated taxa. Statistical analysis of the identification data indicated that the microbial composition of the sourdoughs is mainly affected by the bakery environment rather than the flour type (wheat, rye, spelt, or a mixture of these) used. In conclusion, the polyphasic approach, based on rapid genotypic screening and high-resolution, sequence-dependent identification, proved to be a powerful tool for studying the LAB diversity in traditional fermented foods such as sourdough. PMID:17675431

  19. Influence of geographical origin and flour type on diversity of lactic acid bacteria in traditional Belgian sourdoughs.

    PubMed

    Scheirlinck, Ilse; Van der Meulen, Roel; Van Schoor, Ann; Vancanneyt, Marc; De Vuyst, Luc; Vandamme, Peter; Huys, Geert

    2007-10-01

    A culture-based approach was used to investigate the diversity of lactic acid bacteria (LAB) in Belgian traditional sourdoughs and to assess the influence of flour type, bakery environment, geographical origin, and technological characteristics on the taxonomic composition of these LAB communities. For this purpose, a total of 714 LAB from 21 sourdoughs sampled at 11 artisan bakeries throughout Belgium were subjected to a polyphasic identification approach. The microbial composition of the traditional sourdoughs was characterized by bacteriological culture in combination with genotypic identification methods, including repetitive element sequence-based PCR fingerprinting and phenylalanyl-tRNA synthase (pheS) gene sequence analysis. LAB from Belgian sourdoughs belonged to the genera Lactobacillus, Pediococcus, Leuconostoc, Weissella, and Enterococcus, with the heterofermentative species Lactobacillus paralimentarius, Lactobacillus sanfranciscensis, Lactobacillus plantarum, and Lactobacillus pontis as the most frequently isolated taxa. Statistical analysis of the identification data indicated that the microbial composition of the sourdoughs is mainly affected by the bakery environment rather than the flour type (wheat, rye, spelt, or a mixture of these) used. In conclusion, the polyphasic approach, based on rapid genotypic screening and high-resolution, sequence-dependent identification, proved to be a powerful tool for studying the LAB diversity in traditional fermented foods such as sourdough.

  20. Assessment of SPOT-6 optical remote sensing data against GF-1 using NNDiffuse image fusion algorithm

    NASA Astrophysics Data System (ADS)

    Zhao, Jinling; Guo, Junjie; Cheng, Wenjie; Xu, Chao; Huang, Linsheng

    2017-07-01

    A cross-comparison method was used to assess the SPOT-6 optical satellite imagery against Chinese GF-1 imagery using three types of indicators: spectral and color quality, fusion effect and identification potential. More specifically, spectral response function (SRF) curves were used to compare the two imagery, showing that the SRF curve shape of SPOT-6 is more like a rectangle compared to GF-1 in blue, green, red and near-infrared bands. NNDiffuse image fusion algorithm was used to evaluate the capability of information conservation in comparison with wavelet transform (WT) and principal component (PC) algorithms. The results show that NNDiffuse fused image has extremely similar entropy vales than original image (1.849 versus 1.852) and better color quality. In addition, the object-oriented classification toolset (ENVI EX) was used to identify greenlands for comparing the effect of self-fusion image of SPOT-6 and inter-fusion image between SPOT-6 and GF-1 based on the NNDiffuse algorithm. The overall accuracy is 97.27% and 76.88%, respectively, showing that self-fused image of SPOT-6 has better identification capability.

  1. A numerical scheme for the identification of hybrid systems describing the vibration of flexible beams with tip bodies

    NASA Technical Reports Server (NTRS)

    Rosen, I. G.

    1984-01-01

    A cubic spline based Galerkin-like method is developed for the identification of a class of hybrid systems which describe the transverse vibration to flexible beams with attached tip bodies. The identification problem is formulated as a least squares fit to data subject to the system dynamics given by a coupled system of ordnary and partial differential equations recast as an abstract evolution equation (AEE) in an appropriate infinite dimensional Hilbert space. Projecting the AEE into spline-based subspaces leads naturally to a sequence of approximating finite dimensional identification problems. The solutions to these problems are shown to exist, are relatively easily computed, and are shown to, in some sense, converge to solutions to the original identification problem. Numerical results for a variety of examples are discussed.

  2. Charge Identification of Highly Ionizing Particles in Desensitized Nuclear Emulsion Using High Speed Read-Out System

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Toshito, T.; Kodama, K.; Yusa, K.

    2006-05-10

    We performed an experimental study of charge identification of heavy ions from helium to carbon having energy of about 290 MeV/u using an emulsion chamber. Emulsion was desensitized by means of forced fading (refreshing) to expand a dynamic range of response to highly charged particles. For the track reconstruction and charge identification, the fully automated high speed emulsion read-out system, which was originally developed for identifying minimum ionizing particles, was used without any modification. Clear track by track charge identification up to Z=6 was demonstrated. The refreshing technique has proved to be a powerful technique to expand response of emulsionmore » film to highly ionizing particles.« less

  3. Accurate Identification of Cancerlectins through Hybrid Machine Learning Technology.

    PubMed

    Zhang, Jieru; Ju, Ying; Lu, Huijuan; Xuan, Ping; Zou, Quan

    2016-01-01

    Cancerlectins are cancer-related proteins that function as lectins. They have been identified through computational identification techniques, but these techniques have sometimes failed to identify proteins because of sequence diversity among the cancerlectins. Advanced machine learning identification methods, such as support vector machine and basic sequence features (n-gram), have also been used to identify cancerlectins. In this study, various protein fingerprint features and advanced classifiers, including ensemble learning techniques, were utilized to identify this group of proteins. We improved the prediction accuracy of the original feature extraction methods and classification algorithms by more than 10% on average. Our work provides a basis for the computational identification of cancerlectins and reveals the power of hybrid machine learning techniques in computational proteomics.

  4. Computer-assisted handwriting style identification system for questioned document examination

    NASA Astrophysics Data System (ADS)

    Cha, Sung-Hyuk; Yoon, Sungsoo; Tappert, Charles C.; Lee, Yillbyung

    2005-03-01

    Handwriting originates from a particular copybook style such as Palmer or Zaner-Bloser that one learns in childhood. Since questioned document examination plays an important investigative and forensic role in many types of crime, it is important to develop a system that helps objectively identify a questioned document"s handwriting style. Here, we propose a computer vision system that can assist a document examiner in the identification of a writer"s handwriting style and therefore the origin or nationality of an unknown writer of a questioned document. We collected 33 Roman alphabet copybook styles from 18 countries. Each character in a questioned document is segmented and matched against all of the 33 handwriting copybook styles. The more characters present in the questioned document, the higher the accuracy observed.

  5. Identification of Epigenetic Changes in Prostate Cancer using Induced Pluripotent Stem Cells

    DTIC Science & Technology

    2014-04-01

    somatic cells in human iPS cells. Nat Cell Bioi, 13: 541, 2011 5. Polo, J. M., Liu, S., Figueroa , M. E. et al.: Cell type of origin influences the...human iPS cells. Nat Cell Bioi 13: 5•1 \\ - 5•19. 18. Poloj:\\ə, Lu S, Figueroa ME, Kulalert W, Eminli S, ct a!. (20 10) Cell type of origin

  6. DETAILED ANALYSIS OF SOA ORIGINATING FROM THE PHOTOOXIDATION OF D-LIMONENE IN THE PRESENCE OF NO X AND UV LIGHT AND ITS IMPLICATION TO AMBIENT PM 2.5

    EPA Science Inventory

    A detailed analysis was carried out of the aerosol phase originated from the photooxidation of d-limonene in the presence of NOx and artificial light with the analytical emphasis on the identification of oxygenated organic compounds. The major components included six ...

  7. Scientific returns from a program of space missions to comets

    NASA Technical Reports Server (NTRS)

    Delsemme, A. H.

    1979-01-01

    A program of cometary missions is proposed. The nature and size of interstellar dust, its origin and evolution; identification of new interstellar molecules; clarification of interstellar chemistry; accretion of grains into protosolar cometesimals; role of a T Tauri wind in the dissipation of the protosolar nebula; record of isotopic anomalies, better preserved in comets than in meteorites; cosmogenic and radiogenic dating of comets; cosmochronology and mineralogy of meteorites, as compared with that of cometary samples; origin of the earth's biosphere, and the origin of life are topics discussed in relation to comet exploration.

  8. Vibronic Origin for the Diffuse Band Spectrum

    NASA Astrophysics Data System (ADS)

    Duley, W. W.

    1983-09-01

    The two arguments outlined by Nuth and Donn (1983) against an interpretation of the diffuse band spectrum between 677 and 536 nm as vibronic systems associated with forbidden origins at 14321, 15153, and 15343 cm-1 (Duley, 1982) are controverted. It is concluded that the vibronic analysis presented by Duley, 1983 for the diffuse band spectrum is in keeping with current spectroscopic practice. The identification of a forbidden origin for 19 of these bands at 14321 cm-1 strongly suggests the involvement of Cr3+ ions in MgO solids in the production of these features.

  9. Mental Mechanisms for Topics Identification

    PubMed Central

    2014-01-01

    Topics identification (TI) is the process that consists in determining the main themes present in natural language documents. The current TI modeling paradigm aims at acquiring semantic information from statistic properties of large text datasets. We investigate the mental mechanisms responsible for the identification of topics in a single document given existing knowledge. Our main hypothesis is that topics are the result of accumulated neural activation of loosely organized information stored in long-term memory (LTM). We experimentally tested our hypothesis with a computational model that simulates LTM activation. The model assumes activation decay as an unavoidable phenomenon originating from the bioelectric nature of neural systems. Since decay should negatively affect the quality of topics, the model predicts the presence of short-term memory (STM) to keep the focus of attention on a few words, with the expected outcome of restoring quality to a baseline level. Our experiments measured topics quality of over 300 documents with various decay rates and STM capacity. Our results showed that accumulated activation of loosely organized information was an effective mental computational commodity to identify topics. It was furthermore confirmed that rapid decay is detrimental to topics quality but that limited capacity STM restores quality to a baseline level, even exceeding it slightly. PMID:24744775

  10. New pattern recognition system in the e-nose for Chinese spirit identification

    NASA Astrophysics Data System (ADS)

    Hui, Zeng; Qiang, Li; Yu, Gu

    2016-02-01

    This paper presents a new pattern recognition system for Chinese spirit identification by using the polymer quartz piezoelectric crystal sensor based e-nose. The sensors are designed based on quartz crystal microbalance (QCM) principle, and they could capture different vibration frequency signal values for Chinese spirit identification. For each sensor in an 8-channel sensor array, seven characteristic values of the original vibration frequency signal values, i.e., average value (A), root-mean-square value (RMS), shape factor value (Sf), crest factor value (Cf), impulse factor value (If), clearance factor value (CLf), kurtosis factor value (Kv) are first extracted. Then the dimension of the characteristic values is reduced by the principle components analysis (PCA) method. Finally the back propagation (BP) neutral network algorithm is used to recognize Chinese spirits. The experimental results show that the recognition rate of six kinds of Chinese spirits is 93.33% and our proposed new pattern recognition system can identify Chinese spirits effectively. Project supported by the National High Technology Research and Development Program of China (Grant No. 2013AA030901) and the Fundamental Research Funds for the Central Universities, China (Grant No. FRF-TP-14-120A2).

  11. A drilling tool design and in situ identification of planetary regolith mechanical parameters

    NASA Astrophysics Data System (ADS)

    Zhang, Weiwei; Jiang, Shengyuan; Ji, Jie; Tang, Dewei

    2018-05-01

    The physical and mechanical properties as well as the heat flux of regolith are critical evidence in the study of planetary origin and evolution. Moreover, the mechanical properties of planetary regolith have great value for guiding future human planetary activities. For planetary subsurface exploration, an inchworm boring robot (IBR) has been proposed to penetrate the regolith, and the mechanical properties of the regolith are expected to be simultaneously investigated during the penetration process using the drilling tool on the IBR. This paper provides a preliminary study of an in situ method for measuring planetary regolith mechanical parameters using a drilling tool on a test bed. A conical-screw drilling tool was designed, and its drilling load characteristics were experimentally analyzed. Based on the drilling tool-regolith interaction model, two identification methods for determining the planetary regolith bearing and shearing parameters are proposed. The bearing and shearing parameters of lunar regolith simulant were successfully determined according to the pressure-sinkage tests and shear tests conducted on the test bed. The effects of the operating parameters on the identification results were also analyzed. The results indicate a feasible scheme for future planetary subsurface exploration.

  12. Discrimination of Rhizoma Gastrodiae (Tianma) using 3D synchronous fluorescence spectroscopy coupled with principal component analysis

    NASA Astrophysics Data System (ADS)

    Fan, Qimeng; Chen, Chaoyin; Huang, Zaiqiang; Zhang, Chunmei; Liang, Pengjuan; Zhao, Shenglan

    2015-02-01

    Rhizoma Gastrodiae (Tianma) of different variants and different geographical origins has vital difference in quality and physiological efficacy. This paper focused on the classification and identification of Tianma of six types (two variants from three different geographical origins) using three dimensional synchronous fluorescence spectroscopy (3D-SFS) coupled with principal component analysis (PCA). 3D-SF spectra of aqueous extracts, which were obtained from Tianma of the six types, were measured by a LS-50B luminescence spectrofluorometer. The experimental results showed that the characteristic fluorescent spectral regions of the 3D-SF spectra were similar, while the intensities of characteristic regions are different significantly. Coupled these differences in peak intensities with PCA, Tianma of six types could be discriminated successfully. In conclusion, 3D-SFS coupled with PCA, which has such advantages as effective, specific, rapid, non-polluting, has an edge for discrimination of the similar Chinese herbal medicine. And the proposed methodology is a useful tool to classify and identify Tianma of different variants and different geographical origins.

  13. Identifying mechanical property parameters of planetary soil using in-situ data obtained from exploration rovers

    NASA Astrophysics Data System (ADS)

    Ding, Liang; Gao, Haibo; Liu, Zhen; Deng, Zongquan; Liu, Guangjun

    2015-12-01

    Identifying the mechanical property parameters of planetary soil based on terramechanics models using in-situ data obtained from autonomous planetary exploration rovers is both an important scientific goal and essential for control strategy optimization and high-fidelity simulations of rovers. However, identifying all the terrain parameters is a challenging task because of the nonlinear and coupling nature of the involved functions. Three parameter identification methods are presented in this paper to serve different purposes based on an improved terramechanics model that takes into account the effects of slip, wheel lugs, etc. Parameter sensitivity and coupling of the equations are analyzed, and the parameters are grouped according to their sensitivity to the normal force, resistance moment and drawbar pull. An iterative identification method using the original integral model is developed first. In order to realize real-time identification, the model is then simplified by linearizing the normal and shearing stresses to derive decoupled closed-form analytical equations. Each equation contains one or two groups of soil parameters, making step-by-step identification of all the unknowns feasible. Experiments were performed using six different types of single-wheels as well as a four-wheeled rover moving on planetary soil simulant. All the unknown model parameters were identified using the measured data and compared with the values obtained by conventional experiments. It is verified that the proposed iterative identification method provides improved accuracy, making it suitable for scientific studies of soil properties, whereas the step-by-step identification methods based on simplified models require less calculation time, making them more suitable for real-time applications. The models have less than 10% margin of error comparing with the measured results when predicting the interaction forces and moments using the corresponding identified parameters.

  14. Identification of Corynebacterium amycolatum and Other Nonlipophilic Fermentative Corynebacteria of Human Origin

    PubMed Central

    Wauters, Georges; Van Bosterhaut, Bernard; Janssens, Michèle; Verhaegen, Jan

    1998-01-01

    Four identification tests, proposed in addition to conventional methods, were evaluated with 320 fermentative nonlipophilic Corynebacterium strains: growth at 20°C, glucose fermentation at 42°C, alkalinization of sodium formate, and acid production from ethylene glycol. These tests were highly discriminant. Corynebacterium amycolatum displayed a unique profile, allowing it to be distinguished from similar species, such as C. xerosis, C. striatum, and C. minutissimum. PMID:9574722

  15. 40 CFR 52.2299 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    .../hydrocarbons in Texas designated regions 7 and 10; regulation VII; and control strategy for nitrogen oxides in... printing; rotogravure printing; surface coating processes; transfer efficiency; and vapor balance system...

  16. 40 CFR 52.2299 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    .../hydrocarbons in Texas designated regions 7 and 10; regulation VII; and control strategy for nitrogen oxides in... printing; rotogravure printing; surface coating processes; transfer efficiency; and vapor balance system...

  17. 34 CFR 280.4 - What definitions apply to this program?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... North America, and who maintains cultural identification through tribal affiliation or community..., China, India, Japan, Korea, the Philippine Islands, and Samoa. (3) Black (Not of Hispanic Origin). A...

  18. 34 CFR 280.4 - What definitions apply to this program?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... North America, and who maintains cultural identification through tribal affiliation or community..., China, India, Japan, Korea, the Philippine Islands, and Samoa. (3) Black (Not of Hispanic Origin). A...

  19. 34 CFR 280.4 - What definitions apply to this program?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... North America, and who maintains cultural identification through tribal affiliation or community..., China, India, Japan, Korea, the Philippine Islands, and Samoa. (3) Black (Not of Hispanic Origin). A...

  20. The foot in forensic human identification - a review.

    PubMed

    Davies, C M; Hackman, L; Black, S M

    2014-03-01

    The identification of human remains is a process which can be attempted irrespective of the stage of decomposition in which the remains are found or the anatomical regions recovered. In recent years, the discovery of fragmented human remains has garnered significant attention from the national and international media, particularly the recovery of multiple lower limbs and feet from coastlines in North America. While cases such as these stimulate public curiosity, they present unique challenges to forensic practitioners in relation to the identification of the individual from whom the body part originated. There is a paucity of literature pertaining to the foot in forensic human identification and in particular, in relation to the assessment of the parameters represented by the biological profile. This article presents a review of the literature relating to the role of the foot in forensic human identification and highlights the areas in which greater research is required. Copyright © 2013. Published by Elsevier Ltd.

  1. Development of a Digital Meteorite Identification Program at University of New Mexico (UNM) (Institute of Meteoritics) and Southwestern Indian Polytechnic Institute (SIPI)

    NASA Technical Reports Server (NTRS)

    Gakin, R.; Lewis, K.; Simmons, J.; Gchachu, K.; Karner, J. M.; Newsom, H. E.; Jones, R. H.

    2003-01-01

    Determining the origin and chemical composition of suspect extra terrestrial specimens has lead to meteorite identification research programs. Such programs, like the University of New Mexico-Southwestern Indian Polytechnic Institute partnership, are being inundated with many non-meteorites (meteor wrongs) sent in by interested individuals from all over the world. This meteorite identification program developed a spreadsheet that aids in identifying the types of minerals in a sample for physical properties, possible meteorite characteristics, minerals and rock properties, and possible man made characteristics. Samples that show meteorite distinctiveness are further analyzed via the Scanning Electron Microprobe (SEM).

  2. Affirmative Action Compliance Program for Fiscal Year 1980

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    Eleven chapters are used to delineate Lawrence Berkeley Lab's compliance, namely: (1) a description of LBL's facility, history, staff, mission, etc; (2) Affirmative Action policy statement; (3) dissemination (internal and external) per the implementation regulations; (4) identification of Affirmative Action responsibilities; (5) personnel policies; (6) past goal-setting process and accomplishment; (7) work-force array, job groups, availability determinations, identification of underutilization, and goals and timetables; (8) identification of problem areas and action-oriented programs; (9) listing and brief description of specific LBL Affirmative Action programs; (10) compliance with sex-discrimination guidelines; and (11) compliance with guidelines on discrimination because of religion or nationalmore » origin.« less

  3. Air pollution source identification

    NASA Technical Reports Server (NTRS)

    Fordyce, J. S.

    1975-01-01

    Techniques for air pollution source identification are reviewed, and some results obtained with them are evaluated. Described techniques include remote sensing from satellites and aircraft, on-site monitoring, and the use of injected tracers and pollutants themselves as tracers. The use of a large number of trace elements in ambient airborne particulate matter as a practical means of identifying sources is discussed in detail. Sampling and analysis techniques are described, and it is shown that elemental constituents can be related to specific source types such as those found in the earth's crust and those associated with specific industries. Source identification sytems are noted which utilize charged particle X-ray fluorescence analysis of original field data.

  4. Patent and product piracy

    NASA Astrophysics Data System (ADS)

    Ignat, V.

    2016-08-01

    Advanced industrial countries are affected by technology theft. German industry annually loses more than 50 billion euros. The main causes are industrial espionage and fraudulent copying patents and industrial products. Many Asian countries are profiteering saving up to 65% of production costs. Most affected are small medium enterprises, who do not have sufficient economic power to assert themselves against some powerful countries. International organizations, such as Interpol and World Customs Organization - WCO - work together to combat international economic crime. Several methods of protection can be achieved by registering patents or specific technical methods for recognition of product originality. They have developed more suitable protection, like Hologram, magnetic stripe, barcode, CE marking, digital watermarks, DNA or Nano-technologies, security labels, radio frequency identification, micro color codes, matrix code, cryptographic encodings. The automotive industry has developed the method “Manufactures against Product Piracy”. A sticker on the package features original products and it uses a Data Matrix verifiable barcode. The code can be recorded with a smartphone camera. The smartphone is connected via Internet to a database, where the identification numbers of the original parts are stored.

  5. [Development and application of real-time PCR for identification and detection of horse meat in animal-origin products].

    PubMed

    Li, Nan; Wang, Jiahui; Shen, Qing; Han, Chunhui; Zhang, Jing; Li, Fengqin; Xu, Jin; Jiang, Tao

    2013-11-01

    To develop a real-time PCR method for identification and detection of domestic horse meat (Equus caballus) in animal-origin products. The primer and TaqMan-probe was designed and synthesized according to the EU reference laboratory and 87 bp fragments was amplified for horse ingredients. The specificity and sensitivity was tested by artificially spiked horse meat into other domestic meat, such as cattle, sheep, pork, chicken, duck and rabbit. 122 samples of cattle and sheep products were random collected in Beijing market and the detection of horse meat was carried out. The real-time PCR in this study has high specificity and sensitivity for horse meat. No cross-reaction was observed between the horse and sheep, pork, chicken, duck and rabbit meat. There was little cross reaction between horse and cattle when the CT value reach 33. 81. The method can detect 0.1% of horse meat mixed with other domestic animal-origin products. No horse meat ingredients were detected in 122 samples in this survey. There was no horse meat mixed into cattle and sheep products in Beijing marked.

  6. Identification and its vicissitudes as observed in children: a developmental approach.

    PubMed

    Kramer, S

    1986-01-01

    In the last thirty-five years, theories derived from observational studies on normally developing infants and toddlers as well as on children with severe pathology have augmented Freud's original contribution to the theory of identification. Mahler's formulations, in particular, are used in this paper to demonstrate the importance for identification of the mutual interaction between mother (or caregiver) and even the very young infant, and to delineate the gradual process by which are achieved intrapsychic self and object-representations. The thread of identification is followed from earliest mirroring of the young infant to post-oedipal ego identifications. I present aspects of the treatment of a borderline adopted boy to demonstrate problems in identification which occurs in part because his two primary caregivers competed to such a degree for possession of him, each demanding loyalty to herself and to herself alone, that his identity and identifications were confused, in fact duplicated. This white child had as his alter-ego, really as part of his self-representation, a black half of the self, personified as a black boy whom he fantasized to be his twin.

  7. The genetic evidence for human origin of Jivaroan shrunken heads in collections from the Polish museums.

    PubMed

    Piniewska, Danuta; Sanak, Marek; Wojtas, Marta; Polanska, Nina

    2017-05-01

    Advances in forensic identification using molecular genetics are helpful in resolving some historical mysteries. The aim of this study was to confirm the authenticity of shrunken-head artifacts exhibited by two Polish museums. Shrunken heads, known as tsantsas, were headhunting trophies of South American Indians (Jivaroan). A special preparation preserved their hair and facial appearance. However, it was quite common to offer counterfeit shrunken heads of sloths or monkeys to collectors of curiosities. We sampled small skin specimens of four shrunken-head skin from the museum collection from Warsaw and Krakow, Poland. Following genomic DNA isolation, highly polymorphic short tandem repeats were genotyped using a commercial chemistry and DNA sequencing analyzer. Haplogroups of human Y chromosome were identified. We obtained an informative genetic profile of genomic short tandem repeats from all the samples of shrunken heads. Moreover, amplification of amelogenin loci allowed for sex determination. All four studied shrunken heads were of human origin. In two ones, a shared Y-chromosome haplogroup Q characteristic for Indigenous Americans was detected. Another artifact was counterfeited because Y-chromosome haplogroup I2 was found, characteristic for the Southeastern European origin. Commercial genetic methods of identification can be applied successfully in studies on the origin and authenticity of some unusual collection items.

  8. Video Head Impulse Test to Preoperatively Identify the Nerve of Origin of Vestibular Schwannomas.

    PubMed

    Constanzo, Felipe; Sens, Patricia; Teixeira, Bernardo Corrêa de Almeida; Ramina, Ricardo

    2018-05-10

    Identification of the nerve of origin in vestibular schwannoma (VS) is an important prognostic factor for hearing preservation surgery. Thus far, vestibular functional tests and magnetic resonance imaging have not yielded reliable results to preoperatively evaluate this information. The development of the video head impulse test (vHIT) has allowed a precise evaluation of each semicircular canal, and its localizing value has been tested for some peripheral vestibular diseases, but not for VS. To correlate patterns of semicircular canal alteration on vHIT to intraoperative identification of the nerve of origin of VSs. A total 31 patients with sporadic VSs were preoperatively evaluated with vHIT (gain of vestibule-ocular reflex, overt and covert saccades on each semicircular canal) and then the nerve of origin was surgically identified during surgical resection via retrosigmoid approach. vHIT results were classified as normal, isolated superior vestibular nerve (SVN) pattern, isolated inferior vestibular nerve (IVN) pattern, predominant SVN pattern, and predominant IVN pattern. Hannover classification, cystic component, and distance between the tumor and the end of the internal auditory canal were also considered for analysis. Three patients had a normal vHIT, 12 had an isolated SVN pattern, 5 had an isolated IVN pattern, 7 had a predominant SVN pattern, and 4 had a predominant IVN pattern. vHIT was able to correctly identify the nerve of origin in 89.7% of cases (100% of altered exams). The pattern of semicircular canal dysfunction on vHIT has a localizing value to identify the nerve of origin in VSs.

  9. Grouping in object recognition: the role of a Gestalt law in letter identification.

    PubMed

    Pelli, Denis G; Majaj, Najib J; Raizman, Noah; Christian, Christopher J; Kim, Edward; Palomares, Melanie C

    2009-02-01

    The Gestalt psychologists reported a set of laws describing how vision groups elements to recognize objects. The Gestalt laws "prescribe for us what we are to recognize 'as one thing'" (Kohler, 1920). Were they right? Does object recognition involve grouping? Tests of the laws of grouping have been favourable, but mostly assessed only detection, not identification, of the compound object. The grouping of elements seen in the detection experiments with lattices and "snakes in the grass" is compelling, but falls far short of the vivid everyday experience of recognizing a familiar, meaningful, named thing, which mediates the ordinary identification of an object. Thus, after nearly a century, there is hardly any evidence that grouping plays a role in ordinary object recognition. To assess grouping in object recognition, we made letters out of grating patches and measured threshold contrast for identifying these letters in visual noise as a function of perturbation of grating orientation, phase, and offset. We define a new measure, "wiggle", to characterize the degree to which these various perturbations violate the Gestalt law of good continuation. We find that efficiency for letter identification is inversely proportional to wiggle and is wholly determined by wiggle, independent of how the wiggle was produced. Thus the effects of three different kinds of shape perturbation on letter identifiability are predicted by a single measure of goodness of continuation. This shows that letter identification obeys the Gestalt law of good continuation and may be the first confirmation of the original Gestalt claim that object recognition involves grouping.

  10. Grouping in object recognition: The role of a Gestalt law in letter identification

    PubMed Central

    Pelli, Denis G.; Majaj, Najib J.; Raizman, Noah; Christian, Christopher J.; Kim, Edward; Palomares, Melanie C.

    2009-01-01

    The Gestalt psychologists reported a set of laws describing how vision groups elements to recognize objects. The Gestalt laws “prescribe for us what we are to recognize ‘as one thing’” (Köhler, 1920). Were they right? Does object recognition involve grouping? Tests of the laws of grouping have been favourable, but mostly assessed only detection, not identification, of the compound object. The grouping of elements seen in the detection experiments with lattices and “snakes in the grass” is compelling, but falls far short of the vivid everyday experience of recognizing a familiar, meaningful, named thing, which mediates the ordinary identification of an object. Thus, after nearly a century, there is hardly any evidence that grouping plays a role in ordinary object recognition. To assess grouping in object recognition, we made letters out of grating patches and measured threshold contrast for identifying these letters in visual noise as a function of perturbation of grating orientation, phase, and offset. We define a new measure, “wiggle”, to characterize the degree to which these various perturbations violate the Gestalt law of good continuation. We find that efficiency for letter identification is inversely proportional to wiggle and is wholly determined by wiggle, independent of how the wiggle was produced. Thus the effects of three different kinds of shape perturbation on letter identifiability are predicted by a single measure of goodness of continuation. This shows that letter identification obeys the Gestalt law of good continuation and may be the first confirmation of the original Gestalt claim that object recognition involves grouping. PMID:19424881

  11. 40 CFR 52.1322 - Original Identification of Plan Section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... listed below were submitted on the dates specified. (1) Budget and manpower projections were submitted by... analysis of those measures, and the results of the carbon monoxide dispersion modeling, submitted on...

  12. 40 CFR 52.1322 - Original Identification of Plan Section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... listed below were submitted on the dates specified. (1) Budget and manpower projections were submitted by... analysis of those measures, and the results of the carbon monoxide dispersion modeling, submitted on...

  13. 40 CFR 52.1322 - Original Identification of Plan Section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... listed below were submitted on the dates specified. (1) Budget and manpower projections were submitted by... analysis of those measures, and the results of the carbon monoxide dispersion modeling, submitted on...

  14. 40 CFR 52.1322 - Original Identification of Plan Section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... listed below were submitted on the dates specified. (1) Budget and manpower projections were submitted by... analysis of those measures, and the results of the carbon monoxide dispersion modeling, submitted on...

  15. 40 CFR 52.1322 - Original Identification of Plan Section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... listed below were submitted on the dates specified. (1) Budget and manpower projections were submitted by... analysis of those measures, and the results of the carbon monoxide dispersion modeling, submitted on...

  16. 40 CFR 52.2635 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... October 30, 1990. (ii) Additional material. (A) November 5, 1990, letter from Douglas Skie, EPA, to...)(ii)(B), (k)(vii) and (o). (ii) Additional material. (A) Letter from Mary A. Throne, Assistant...

  17. 40 CFR 52.2635 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... October 30, 1990. (ii) Additional material. (A) November 5, 1990, letter from Douglas Skie, EPA, to...)(ii)(B), (k)(vii) and (o). (ii) Additional material. (A) Letter from Mary A. Throne, Assistant...

  18. 40 CFR 52.2635 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... October 30, 1990. (ii) Additional material. (A) November 5, 1990, letter from Douglas Skie, EPA, to...)(ii)(B), (k)(vii) and (o). (ii) Additional material. (A) Letter from Mary A. Throne, Assistant...

  19. 40 CFR 52.2635 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... October 30, 1990. (ii) Additional material. (A) November 5, 1990, letter from Douglas Skie, EPA, to...)(ii)(B), (k)(vii) and (o). (ii) Additional material. (A) Letter from Mary A. Throne, Assistant...

  20. 40 CFR 52.2635 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... October 30, 1990. (ii) Additional material. (A) November 5, 1990, letter from Douglas Skie, EPA, to...)(ii)(B), (k)(vii) and (o). (ii) Additional material. (A) Letter from Mary A. Throne, Assistant...

  1. Hiding in plain sight: use of realistic surrogates to reduce exposure of protected health information in clinical text.

    PubMed

    Carrell, David; Malin, Bradley; Aberdeen, John; Bayer, Samuel; Clark, Cheryl; Wellner, Ben; Hirschman, Lynette

    2013-01-01

    Secondary use of clinical text is impeded by a lack of highly effective, low-cost de-identification methods. Both, manual and automated methods for removing protected health information, are known to leave behind residual identifiers. The authors propose a novel approach for addressing the residual identifier problem based on the theory of Hiding In Plain Sight (HIPS). HIPS relies on obfuscation to conceal residual identifiers. According to this theory, replacing the detected identifiers with realistic but synthetic surrogates should collectively render the few 'leaked' identifiers difficult to distinguish from the synthetic surrogates. The authors conducted a pilot study to test this theory on clinical narrative, de-identified by an automated system. Test corpora included 31 oncology and 50 family practice progress notes read by two trained chart abstractors and an informaticist. Experimental results suggest approximately 90% of residual identifiers can be effectively concealed by the HIPS approach in text containing average and high densities of personal identifying information. This pilot test suggests HIPS is feasible, but requires further evaluation. The results need to be replicated on larger corpora of diverse origin under a range of detection scenarios. Error analyses also suggest areas where surrogate generation techniques can be refined to improve efficacy. If these results generalize to existing high-performing de-identification systems with recall rates of 94-98%, HIPS could increase the effective de-identification rates of these systems to levels above 99% without further advancements in system recall. Additional and more rigorous assessment of the HIPS approach is warranted.

  2. Determination of the ruminant origin of bone particles using fluorescence in situ hybridization (FISH)

    PubMed Central

    Lecrenier, M. C.; Ledoux, Q.; Berben, G.; Fumière, O.; Saegerman, C.; Baeten, V.; Veys, P.

    2014-01-01

    Molecular biology techniques such as PCR constitute powerful tools for the determination of the taxonomic origin of bones. DNA degradation and contamination by exogenous DNA, however, jeopardise bone identification. Despite the vast array of techniques used to decontaminate bone fragments, the isolation and determination of bone DNA content are still problematic. Within the framework of the eradication of transmissible spongiform encephalopathies (including BSE, commonly known as “mad cow disease”), a fluorescence in situ hybridization (FISH) protocol was developed. Results from the described study showed that this method can be applied directly to bones without a demineralisation step and that it allows the identification of bovine and ruminant bones even after severe processing. The results also showed that the method is independent of exogenous contamination and that it is therefore entirely appropriate for this application. PMID:25034259

  3. Determination of the ruminant origin of bone particles using fluorescence in situ hybridization (FISH).

    PubMed

    Lecrenier, M C; Ledoux, Q; Berben, G; Fumière, O; Saegerman, C; Baeten, V; Veys, P

    2014-07-17

    Molecular biology techniques such as PCR constitute powerful tools for the determination of the taxonomic origin of bones. DNA degradation and contamination by exogenous DNA, however, jeopardise bone identification. Despite the vast array of techniques used to decontaminate bone fragments, the isolation and determination of bone DNA content are still problematic. Within the framework of the eradication of transmissible spongiform encephalopathies (including BSE, commonly known as "mad cow disease"), a fluorescence in situ hybridization (FISH) protocol was developed. Results from the described study showed that this method can be applied directly to bones without a demineralisation step and that it allows the identification of bovine and ruminant bones even after severe processing. The results also showed that the method is independent of exogenous contamination and that it is therefore entirely appropriate for this application.

  4. Optimized scalar promotion with load and splat SIMD instructions

    DOEpatents

    Eichenberger, Alexander E; Gschwind, Michael K; Gunnels, John A

    2013-10-29

    Mechanisms for optimizing scalar code executed on a single instruction multiple data (SIMD) engine are provided. Placement of vector operation-splat operations may be determined based on an identification of scalar and SIMD operations in an original code representation. The original code representation may be modified to insert the vector operation-splat operations based on the determined placement of vector operation-splat operations to generate a first modified code representation. Placement of separate splat operations may be determined based on identification of scalar and SIMD operations in the first modified code representation. The first modified code representation may be modified to insert or delete separate splat operations based on the determined placement of the separate splat operations to generate a second modified code representation. SIMD code may be output based on the second modified code representation for execution by the SIMD engine.

  5. Optimized scalar promotion with load and splat SIMD instructions

    DOEpatents

    Eichenberger, Alexandre E [Chappaqua, NY; Gschwind, Michael K [Chappaqua, NY; Gunnels, John A [Yorktown Heights, NY

    2012-08-28

    Mechanisms for optimizing scalar code executed on a single instruction multiple data (SIMD) engine are provided. Placement of vector operation-splat operations may be determined based on an identification of scalar and SIMD operations in an original code representation. The original code representation may be modified to insert the vector operation-splat operations based on the determined placement of vector operation-splat operations to generate a first modified code representation. Placement of separate splat operations may be determined based on identification of scalar and SIMD operations in the first modified code representation. The first modified code representation may be modified to insert or delete separate splat operations based on the determined placement of the separate splat operations to generate a second modified code representation. SIMD code may be output based on the second modified code representation for execution by the SIMD engine.

  6. Geometric morphometric methods for three-dimensional virtual reconstruction of a fragmented cranium: the case of Angelo Poliziano.

    PubMed

    Benazzi, S; Stansfield, E; Milani, C; Gruppioni, G

    2009-07-01

    The process of forensic identification of missing individuals is frequently reliant on the superimposition of cranial remains onto an individual's picture and/or facial reconstruction. In the latter, the integrity of the skull or a cranium is an important factor in successful identification. Here, we recommend the usage of computerized virtual reconstruction and geometric morphometrics for the purposes of individual reconstruction and identification in forensics. We apply these methods to reconstruct a complete cranium from facial remains that allegedly belong to the famous Italian humanist of the fifteenth century, Angelo Poliziano (1454-1494). Raw data was obtained by computed tomography scans of the Poliziano face and a complete reference skull of a 37-year-old Italian male. Given that the amount of distortion of the facial remains is unknown, two reconstructions are proposed: The first calculates the average shape between the original and its reflection, and the second discards the less preserved left side of the cranium under the assumption that there is no deformation on the right. Both reconstructions perform well in the superimposition with the original preserved facial surface in a virtual environment. The reconstruction by means of averaging between the original and reflection yielded better results during the superimposition with portraits of Poliziano. We argue that the combination of computerized virtual reconstruction and geometric morphometric methods offers a number of advantages over traditional plastic reconstruction, among which are speed, reproducibility, easiness of manipulation when superimposing with pictures in virtual environment, and assumptions control.

  7. Class and ideological orientations revisited: an exploration of class-based mechanisms.

    PubMed

    Bengtsson, Mattias; Berglund, Tomas; Oskarson, Maria

    2013-12-01

    Studies of the relationship between class position and political outlooks still only have a limited understanding of the class-related mechanisms that matter for ideological orientations. This article presents a comprehensive analysis of the mechanisms that link class position and left/right and authoritarian/libertarian orientations. Besides main factors such as income, career prospects, job security, education, class origin and class identification, the significance of work-related factors such as work autonomy, working in a team, a physically demanding job and a mentally demanding job is studied. The findings are based on a survey specifically designed for this purpose and collected in Sweden in 2008/2009. A great deal of the association between class position and left/right orientations is explained by socio-economic conditions; different classes sympathize with policies that will benefit them economically. Another important factor is class identification. Work-related factors also have relevance, but the effect of class position on left/right orientations works mainly through the remuneration system. Class position is also related to authoritarian/libertarian orientations. However, this relationship is less explained by socio-economic position per se, but is rather an effect of the educational system and its allocation of the workforce into different class positions. It also turns out that work-related factors do not explain the class effects; however, a physically demanding job shows a unique effect. Overall, our findings suggest that besides factors such as class position, income, education and class identification, we need to consider work-related aspects to derive a more complete understanding of the distribution of ideological orientations in Western societies. © London School of Economics and Political Science 2013.

  8. Motion capture based identification of the human body inertial parameters.

    PubMed

    Venture, Gentiane; Ayusawa, Ko; Nakamura, Yoshihiko

    2008-01-01

    Identification of body inertia, masses and center of mass is an important data to simulate, monitor and understand dynamics of motion, to personalize rehabilitation programs. This paper proposes an original method to identify the inertial parameters of the human body, making use of motion capture data and contact forces measurements. It allows in-vivo painless estimation and monitoring of the inertial parameters. The method is described and then obtained experimental results are presented and discussed.

  9. Combination of cytochrome b heteroduplex-assay and sequencing for identification of triatomine blood meals.

    PubMed

    Buitrago, Rosio; Depickère, Stéphanie; Bosseno, Marie-France; Patzi, Edda Siñani; Waleckx, Etienne; Salas, Renata; Aliaga, Claudia; Brenière, Simone Frédérique

    2012-01-01

    The identification of blood meals in vectors contributes greatly to the understanding of interactions between vectors, microorganisms and hosts. The aim of the current work was to complement the validation of cytochrome b (Cytb) heteroduplex assay (HDA) previously described, and to add the sequencing of the Cytb gene of some samples for the identification of blood meals in triatomines. Experimental feedings of reared triatomines helped to clarify the sensitivity of the HDA. Moreover, the sequencing coupled with the HDA, allowed the assessment of the technique's taxonomic level of discrimination. The primers used to produce DNA fragments of Cytb genes for HDA had a very high sensitivity for vertebrate DNAs, rather similar for mammals, birds and reptiles. However, the formation of heteroduplex depended on blood meal's quality rather than its quantity; a correlation was observed between blood meals' color and the positivity of HDA. HDA electrophoresis profiles were reproducible, and allowed the discrimination of blood origins at the species level. However, in some cases, intraspecific variability of Cytb gene generated different HDA profiles. The HDA based on comparison of electrophoresis profiles is a very useful tool for screening large samples to determine blood origins; the subsequent sequencing of PCR products of Cytb corresponding to different HDA profiles allowed the identification of species whatever the biotope in which the vectors were captured. Copyright © 2011. Published by Elsevier B.V.

  10. Molecular identification of coliform bacteria isolated from drinking water reservoirs with traditional methods and the Colilert-18 system.

    PubMed

    Kämpfer, Peter; Nienhüser, Anita; Packroff, Gabriele; Wernicke, Frank; Mehling, Arnd; Nixdorf, Katja; Fiedler, Stefanie; Kolauch, Claudia; Esser, Michael

    2008-07-01

    The accuracy of a traditional method (lactose utilization with acid and gas production) for the detection of coliform bacteria and E. coli was tested in comparison with method ISO 9308-1 (based on acid formation from lactose) and the Colilert-18 system (detection of beta-galactosidase). A total of 345 isolates were identified after isolation from water samples using API 20E strips. The Colilert-18 led to the highest number of positive findings (95% of the isolates were assigned to coliforms), whereas the ISO-9308-1 method resulted only in 29% coliform findings. With the traditional method only 15% were rated positive. Most of the isolates were identified by the API 20E system as Enterobacter spp. (species of the Enterobacter cloacae complex), Serratia spp., Citrobacter spp.and Klebsiella spp.; but species identification remained vague in several cases. A more detailed identification of 126 pure cultures by using 16S rRNA gene sequence analysis and analysis of the hsp60 gene resulted in the identification of Enterobacter nimipressuralis, E. amnigenus, E. asburiae, E. hormaechei, and Serratia fonticola as predominat coliforms. These species are beta-galactosidase positive, but show acid formation from lactose often after a prolonged incubation time. They are often not of fecal origin and may interfere with the ability to accurately detect coliforms of fecal origin.

  11. Identification of Lactobacillus strains of goose origin using MALDI-TOF mass spectrometry and 16S-23S rDNA intergenic spacer PCR analysis.

    PubMed

    Dec, Marta; Urban-Chmiel, Renata; Gnat, Sebastian; Puchalski, Andrzej; Wernicki, Andrzej

    2014-04-01

    The objective of our study was to identify Lactobacillus sp. strains of goose origin using MALDI-TOF mass spectrometry, ITS-PCR and ITS-PCR/RFLP. All three techniques proved to be valuable tools for identification of avian lactobacilli and produced comparable classification results. Lactobacillus strains were isolated from 100% of geese aged 3 weeks to 4 years, but from only 25% of chicks aged 1-10 days. Among the 104 strains isolated, we distinguished 14 Lactobacillus species. The dominant species was Lactobacillus salivarius (35.6%), followed by Lactobacillus johnsonii (18.3%), Lactobacillus ingluviei (11.5%) and Lactobacillus agilis (7.7%). The intact-cell MALDI-TOF mass spectrometry enabled rapid species identification of the lactobacilli with minimal pretreatment. However, it produced more than one identification result for 11.5% examined strains (mainly of the species L. johnsonii). ITS-PCR distinguished 12 genotypes among the isolates, but was not able to differentiate closely related strains, i.e. between Lactobacillus amylovorus and Lactobacillus kitasatonis and between Lactobacillus paracasei, Lactobacillus rhamnosus and Lactobacillus zeae. These species were differentiated by ITS-PCR/RFLP using the restriction enzymes TaqI and MseI. The results obtained indicate that ITS-PCR and ITS-PCR/RFLP assays could be used not only for interspecific, but also for intraspecific, typing. Copyright © 2014 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  12. Reviewing the current evidence supporting early B-cells as the cellular origin of Merkel cell carcinoma.

    PubMed

    Sauer, C M; Haugg, A M; Chteinberg, E; Rennspiess, D; Winnepenninckx, V; Speel, E-J; Becker, J C; Kurz, A K; Zur Hausen, A

    2017-08-01

    Merkel cell carcinoma (MCC) is a highly malignant skin cancer characterized by early metastases and poor survival. Although MCC is a rare malignancy, its incidence is rapidly increasing in the U.S. and Europe. The discovery of the Merkel cell polyomavirus (MCPyV) has enormously impacted our understanding of its etiopathogenesis and biology. MCCs are characterized by trilinear differentiation, comprising the expression of neuroendocrine, epithelial and B-lymphoid lineage markers. To date, it is generally accepted that the initial assumption of MCC originating from Merkel cells (MCs) is unlikely. This is owed to their post-mitotic character, absence of MCPyV in MCs and discrepant protein expression pattern in comparison to MCC. Evidence from mouse models suggests that epidermal/dermal stem cells might be of cellular origin in MCC. The recently formulated hypothesis of MCC originating from early B-cells is based on morphology, the consistent expression of early B-cell lineage markers and the finding of clonal immunoglobulin chain rearrangement in MCC cells. In this review we elaborate on the cellular ancestry of MCC, the identification of which could pave the way for novel and more effective therapeutic regimens. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

  13. Carbon isotope ratios and isotopic correlations between components in fruit juices

    NASA Astrophysics Data System (ADS)

    Wierzchnicki, Ryszard

    2013-04-01

    Nowadays food products are defined by geographical origin, method of production and by some regulations concerning terms of their authenticity. Important data for confirm the authenticity of product are providing by isotopic methods of food control. The method checks crucial criteria which characterize the authenticity of inspected product. The European Union Regulations clearly show the tendency for application of the isotopic methods for food authenticity control (wine, honey, juice). The aim of the legislation steps is the protection of European market from possibility of the commercial frauds. Method of isotope ratio mass spectrometry is very effective tool for the use distinguishably the food products of various geographical origin. The basic problem for identification of the sample origin is the lack of databases of isotopic composition of components and information about the correlations of the data. The subject of the work was study the isotopic correlations existing between components of fruits. The chemical and instrumental methods of separation: water, sugars, organic acids and pulp from fruit were implemented. IRMS technique was used to measure isotopic composition of samples. The final results for original samples of fruits (apple, strawberry etc.) will be presented and discussed. Acknowledgement: This work was supported by the Polish Ministry of Science and Higher Education under grant NR12-0043-10/2010.

  14. Discrimination of almonds (Prunus dulcis) geographical origin by minerals and fatty acids profiling.

    PubMed

    Amorello, Diana; Orecchio, Santino; Pace, Andrea; Barreca, Salvatore

    2016-09-01

    Twenty-one almond samples from three different geographical origins (Sicily, Spain and California) were investigated by determining minerals and fatty acids compositions. Data were used to discriminate by chemometry almond origin by linear discriminant analysis. With respect to previous PCA profiling studies, this work provides a simpler analytical protocol for the identification of almonds geographical origin. Classification by using mineral contents data only was correct in 77% of the samples, while, by using fatty acid profiles, the percentages of samples correctly classified reached 82%. The coupling of mineral contents and fatty acid profiles lead to an increased efficiency of the classification with 87% of samples correctly classified.

  15. Identification Of Geographical Origin Of Coffee Before And After Roasting By Electronic Noses

    NASA Astrophysics Data System (ADS)

    Sberveglieri, V.; Concina, I.; Falasconi, M.; Ongo, E.; Pulvirenti, A.; Fava, P.

    2011-09-01

    Geographical origin traceability of food is a relevant issue for both producers' business protection and customers' rights safeguard. Differentiation of coffees on the basis of geographical origin is still a challenging issue, though possible by means of chemical techniques [1]. Between the most widely consumed beverage, coffee is a valuable one, with an aroma constituted by hundreds of volatiles [2]. Since the final global volatile composition is also determined by the cultivation climatic conditions, Electronic Noses (ENs) could be interesting candidates for distinguishing the geographical provenience by exploiting differences in chemical volatile profile. The present investigation is directed toward the characterization of green and roasted coffees samples according to their geographical origin.

  16. MALDI-TOF MS identification of Anopheles gambiae Giles blood meal crushed on Whatman filter papers.

    PubMed

    Niare, Sirama; Almeras, Lionel; Tandina, Fatalmoudou; Yssouf, Amina; Bacar, Affane; Toilibou, Ali; Doumbo, Ogobara; Raoult, Didier; Parola, Philippe

    2017-01-01

    Identification of the source of mosquito blood meals is an important component for disease control and surveillance. Recently, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) profiling has emerged as an effective tool for mosquito blood meal identification, using the abdomens of freshly engorged mosquitoes. In the field, mosquito abdomens are crushed on Whatman filter papers to determine the host feeding patterns by identifying the origin of their blood meals. The aim of this study was to test whether crushing engorged mosquito abdomens on Whatman filter papers was compatible with MALDI-TOF MS for mosquito blood meal identification. Both laboratory reared and field collected mosquitoes were tested. Sixty Anopheles gambiae Giles were experimentally engorged on the blood of six distinct vertebrate hosts (human, sheep, rabbit, dog, chicken and rat). The engorged mosquito abdomens were crushed on Whatman filter papers for MALDI-TOF MS analysis. 150 Whatman filter papers, with mosquitoes engorged on cow and goat blood, were preserved. A total of 77 engorged mosquito abdomens collected in the Comoros Islands and crushed on Whatman filter papers were tested with MALDI-TOF MS. The MS profiles generated from mosquito engorged abdomens crushed on Whatman filter papers exhibited high reproducibility according to the original host blood. The blood meal host was correctly identified from mosquito abdomens crushed on Whatman filter papers by MALDI-TOF MS. The MS spectra obtained after storage were stable regardless of the room temperature and whether or not they were frozen. The MS profiles were reproducible for up to three months. For the Comoros samples, 70/77 quality MS spectra were obtained and matched with human blood spectra. This was confirmed by molecular tools. The results demonstrated that MALDI-TOF MS could identify mosquito blood meals from Whatman filter papers collected in the field during entomological surveys. The application of MALDI-TOF MS has proved to be rapid and successful, making it a new and efficient tool for mosquito-borne disease surveillance.

  17. [Discrimination of varieties of borneol using terahertz spectra based on principal component analysis and support vector machine].

    PubMed

    Li, Wu; Hu, Bing; Wang, Ming-wei

    2014-12-01

    In the present paper, the terahertz time-domain spectroscopy (THz-TDS) identification model of borneol based on principal component analysis (PCA) and support vector machine (SVM) was established. As one Chinese common agent, borneol needs a rapid, simple and accurate detection and identification method for its different source and being easily confused in the pharmaceutical and trade links. In order to assure the quality of borneol product and guard the consumer's right, quickly, efficiently and correctly identifying borneol has significant meaning to the production and transaction of borneol. Terahertz time-domain spectroscopy is a new spectroscopy approach to characterize material using terahertz pulse. The absorption terahertz spectra of blumea camphor, borneol camphor and synthetic borneol were measured in the range of 0.2 to 2 THz with the transmission THz-TDS. The PCA scores of 2D plots (PC1 X PC2) and 3D plots (PC1 X PC2 X PC3) of three kinds of borneol samples were obtained through PCA analysis, and both of them have good clustering effect on the 3 different kinds of borneol. The value matrix of the first 10 principal components (PCs) was used to replace the original spectrum data, and the 60 samples of the three kinds of borneol were trained and then the unknown 60 samples were identified. Four kinds of support vector machine model of different kernel functions were set up in this way. Results show that the accuracy of identification and classification of SVM RBF kernel function for three kinds of borneol is 100%, and we selected the SVM with the radial basis kernel function to establish the borneol identification model, in addition, in the noisy case, the classification accuracy rates of four SVM kernel function are above 85%, and this indicates that SVM has strong generalization ability. This study shows that PCA with SVM method of borneol terahertz spectroscopy has good classification and identification effects, and provides a new method for species identification of borneol in Chinese medicine.

  18. Improved Estimates of Clear Sky Longwave Flux and Application to the Tropical Greenhouse Effect

    NASA Technical Reports Server (NTRS)

    Collins, W. D.

    1997-01-01

    The first objective of this investigation is to eliminate the clear-sky offset introduced by the scene-identification procedures developed for the Earth Radiation Budget Experiment (ERBE). Estimates of this systematic bias range from 10 to as high as 30 W/sq m. The initial version of the ScaRaB data is being processed with the original ERBE algorithm. Since the ERBE procedure for scene identification is based upon zonal flux averages, clear scenes with longwave emission well below the zonal mean value are mistakenly classified as cloudy. The erroneous classification is more frequent in regions with deep convection and enhanced mid- and upper-tropospheric humidity. We will develop scene identification parameters with zonal and/or time dependence to reduce or eliminate the bias in the clear- sky data. The modified scene identification procedure could be used for the ScaRaB-specific version of the Earth-radiation products. The second objective is to investigate changes in the clear-sky Outgoing Longwave Radiation (OLR) associated with decadal variations in the tropical and subtropical climate. There is considerable evidence for a shift in the climate state starting in approximately 1977. The shift is accompanied by higher SSTs in the equatorial Pacific, increased tropical convection, and higher values of atmospheric humidity. Other evidence indicates that the humidity in the tropical troposphere has been steadily increasing over the last 30 years. It is not known whether the atmospheric greenhouse effect has increased during this period in response to these changes in SST and precipitable water. We will investigate the decadal-scale fluctuations in the greenhouse effect using Nimbus-7, ERBE, and ScaRaB measurements spaning 1979 to the present. The data from the different satellites will be intercalibrated by comparison with model calculations based upon ship radiosonde observations. The fluxes calculated from the radiation model will also be used for validation of the ScaRaB fluxes.

  19. Multivariate analysis for source identification of pollution in sediment of Linggi River, Malaysia.

    PubMed

    Elias, Md Suhaimi; Ibrahim, Shariff; Samuding, Kamarudin; Rahman, Shamsiah Ab; Wo, Yii Mei; Daung, Jeremy Andy Dominic

    2018-03-29

    Rapid socioeconomic development in the Linggi River Basin has contributed to the significant increase of pollution discharge into the Linggi River and its adjacent coastal areas. The toxic element contents and distributions in the sediment samples collected along the Linggi River were determined using neutron activation analysis (NAA) and inductively coupled plasma-mass spectrometry (ICP-MS) techniques. The measured mean concentration of As, Cd, Pb, Sb, U, Th and Zn is relatively higher compared to the continental crust value of the respective element. Most of the elements (As, Cr, Fe, Pb, Sb and Zn) exceeded the freshwater sediment quality guideline-threshold effect concentration (FSQG-TEC) value. Downstream stations of the Linggi River showed that As concentrations in sediment exceeded the freshwater sediment quality guideline-probable effect concentration (FSQG-PEC) value. This indicates that the concentration of As will give an adverse effect to the growth of sediment-dwelling organisms. Generally, the Linggi River sediment can be categorised as unpolluted to strongly polluted and unpolluted to strongly to extremely polluted. The correlation matrix of metal-metal relationship, principle component analysis (PCA) and cluster analysis (CA) indicates that the pollution sources of Cu, Ni, Zn, Cd and Pb in sediments of the Linggi River originated from the industry of electronics and electroplating. Elements of As, Cr, Sb and Fe mainly originated from motor-vehicle workshops and metal work, whilst U and Th originated from natural processes such as terrestrial runoff and land erosion.

  20. Renormalization group flow of the Higgs potential

    NASA Astrophysics Data System (ADS)

    Gies, Holger; Sondenheimer, René

    2018-01-01

    We summarize results for local and global properties of the effective potential for the Higgs boson obtained from the functional renormalization group, which allows one to describe the effective potential as a function of both scalar field amplitude and renormalization group scale. This sheds light onto the limitations of standard estimates which rely on the identification of the two scales and helps in clarifying the origin of a possible property of meta-stability of the Higgs potential. We demonstrate that the inclusion of higher-dimensional operators induced by an underlying theory at a high scale (GUT or Planck scale) can relax the conventional lower bound on the Higgs mass derived from the criterion of absolute stability. This article is part of the Theo Murphy meeting issue `Higgs cosmology'.

  1. Wing serial homologs and the origin and evolution of the insect wing.

    PubMed

    Ohde, Takahiro; Yaginuma, Toshinobu; Niimi, Teruyuki

    2014-04-01

    The origin and evolution of insect wings has been the subject of extensive debate. The issue has remained controversial largely because of the absence of definitive fossil evidence or direct developmental evidence of homology between wings and a putative wing origin. Recent identification of wing serial homologs (WSHs) has provided researchers with a potential strategy for identifying WSHs in other species. Future comparative developmental analyses between wings and WSHs may clarify the important steps underlying the evolution of insect wings. Copyright © 2013 The Authors. Published by Elsevier GmbH.. All rights reserved.

  2. The effects of the National School Lunch Program on education and health.

    PubMed

    Hinrichs, Peter

    2010-01-01

    This paper estimates the effects of participating in the National School Lunch Program in the middle of the 20th century on adult health outcomes and educational attainment. I utilize an instrumental variables strategy that exploits a change in the formula used by the federal government to allocate funding to the states. Identification is achieved by the fact that different birth cohorts were exposed to different degrees to the original formula and the new formula, along with the fact that the change of the formula affected states differentially by per capita income. Participation in the program as a child appears to have few long-run effects on health, but the effects on educational attainment are sizable. These results may suggest that subsidized lunches induced children to attend school but displaced food consumption from other sources. Alternatively, the program may have had short-run health effects that dissipated over time but that facilitated higher educational attainment.

  3. Identification of specific bovine blood biomarkers with a non-targeted approach using HPLC ESI tandem mass spectrometry.

    PubMed

    Lecrenier, M C; Marbaix, H; Dieu, M; Veys, P; Saegerman, C; Raes, M; Baeten, V

    2016-12-15

    Animal by-products are valuable protein sources in animal nutrition. Among them are blood products and blood meal, which are used as high-quality material for their beneficial effects on growth and health. Within the framework of the feed ban relaxation, the development of complementary methods in order to refine the identification of processed animal proteins remains challenging. The aim of this study was to identify specific biomarkers that would allow the detection of bovine blood products and processed animal proteins using tandem mass spectrometry. Seventeen biomarkers were identified: nine peptides for bovine plasma powder; seven peptides for bovine haemoglobin powder, including six peptides for bovine blood meal; and one peptide for porcine blood. They were not detected in several commercial compound feed or feed materials, such as blood by-products of other animal origins, milk-derived products and fish meal. These biomarkers could be used for developing a species-specific and blood-specific detection method. Copyright © 2016 Elsevier Ltd. All rights reserved.

  4. Identification Code of Interstellar Cloud within IRAF

    NASA Astrophysics Data System (ADS)

    Lee, Youngung; Jung, Jae Hoon; Kim, Hyun-Goo

    1997-12-01

    We present a code which identifies individual clouds in crowded region using IMFORT interface within Image Reduction and Analysis Facility(IRAF). We define a cloud as an object composed of all pixels in longitude, latitude, and velocity that are simply connected and that lie above some threshold temperature. The code searches the whole pixels of the data cube in efficient way to isolate individual clouds. Along with identification of clouds it is designed to estimate their mean values of longitudes, latitudes, and velocities. In addition, a function of generating individual images(or cube data) of identified clouds is added up. We also present identified individual clouds using a 12CO survey data cube of Galactic Anticenter Region(Lee et al. 1997) as a test example. We used a threshold temperature of 5 sigma rms noise level of the data. With a higher threshold temperature, we isolated subclouds of a huge cloud identified originally. As the most important parameter to identify clouds is the threshold value, its effect to the size and velocity dispersion is discussed rigorously.

  5. Identification and resolution of artifacts in the interpretation of imprinted gene expression.

    PubMed

    Proudhon, Charlotte; Bourc'his, Déborah

    2010-12-01

    Genomic imprinting refers to genes that are epigenetically programmed in the germline to express exclusively or preferentially one allele in a parent-of-origin manner. Expression-based genome-wide screening for the identification of imprinted genes has failed to uncover a significant number of new imprinted genes, probably because of the high tissue- and developmental-stage specificity of imprinted gene expression. A very large number of technical and biological artifacts can also lead to the erroneous evidence of imprinted gene expression. In this article, we focus on three common sources of potential confounding effects: (i) random monoallelic expression in monoclonal cell populations, (ii) genetically determined monoallelic expression and (iii) contamination or infiltration of embryonic tissues with maternal material. This last situation specifically applies to genes that occur as maternally expressed in the placenta. Beside the use of reciprocal crosses that are instrumental to confirm the parental specificity of expression, we provide additional methods for the detection and elimination of these situations that can be misinterpreted as cases of imprinted expression.

  6. Application of Barcoding to Reduce Error of Patient Identification and to Increase Patient's Information Confidentiality of Test Tube Labelling in a Psychiatric Teaching Hospital.

    PubMed

    Liu, Hsiu-Chu; Li, Hsing; Chang, Hsin-Fei; Lu, Mei-Rou; Chen, Feng-Chuan

    2015-01-01

    Learning from the experience of another medical center in Taiwan, Kaohsiung Municipal Kai-Suan Psychiatric Hospital has changed the nursing informatics system step by step in the past year and a half . We considered ethics in the original idea of implementing barcodes on the test tube labels to process the identification of the psychiatric patients. The main aims of this project are to maintain the confidential information and to transport the sample effectively. The primary nurses had been using different work sheets for this project to ensure the acceptance of the new barcode system. In the past two years the errors in the blood testing process were as high as 11,000 in 14,000 events per year, resulting in wastage of resources. The actions taken by the nurses and the new barcode system implementation can improve the clinical nursing care quality, safety of the patients, and efficiency, while decreasing the cost due to the human error.

  7. Experimental parameter identification of a multi-scale musculoskeletal model controlled by electrical stimulation: application to patients with spinal cord injury.

    PubMed

    Benoussaad, Mourad; Poignet, Philippe; Hayashibe, Mitsuhiro; Azevedo-Coste, Christine; Fattal, Charles; Guiraud, David

    2013-06-01

    We investigated the parameter identification of a multi-scale physiological model of skeletal muscle, based on Huxley's formulation. We focused particularly on the knee joint controlled by quadriceps muscles under electrical stimulation (ES) in subjects with a complete spinal cord injury. A noninvasive and in vivo identification protocol was thus applied through surface stimulation in nine subjects and through neural stimulation in one ES-implanted subject. The identification protocol included initial identification steps, which are adaptations of existing identification techniques to estimate most of the parameters of our model. Then we applied an original and safer identification protocol in dynamic conditions, which required resolution of a nonlinear programming (NLP) problem to identify the serial element stiffness of quadriceps. Each identification step and cross validation of the estimated model in dynamic condition were evaluated through a quadratic error criterion. The results highlighted good accuracy, the efficiency of the identification protocol and the ability of the estimated model to predict the subject-specific behavior of the musculoskeletal system. From the comparison of parameter values between subjects, we discussed and explored the inter-subject variability of parameters in order to select parameters that have to be identified in each patient.

  8. Heuristics to Evaluate Interactive Systems for Children with Autism Spectrum Disorder (ASD).

    PubMed

    Khowaja, Kamran; Salim, Siti Salwah; Asemi, Adeleh

    2015-01-01

    In this paper, we adapted and expanded a set of guidelines, also known as heuristics, to evaluate the usability of software to now be appropriate for software aimed at children with autism spectrum disorder (ASD). We started from the heuristics developed by Nielsen in 1990 and developed a modified set of 15 heuristics. The first 5 heuristics of this set are the same as those of the original Nielsen set, the next 5 heuristics are improved versions of Nielsen's, whereas the last 5 heuristics are new. We present two evaluation studies of our new heuristics. In the first, two groups compared Nielsen's set with the modified set of heuristics, with each group evaluating two interactive systems. The Nielsen's heuristics were assigned to the control group while the experimental group was given the modified set of heuristics, and a statistical analysis was conducted to determine the effectiveness of the modified set, the contribution of 5 new heuristics and the impact of 5 improved heuristics. The results show that the modified set is significantly more effective than the original, and we found a significant difference between the five improved heuristics and their corresponding heuristics in the original set. The five new heuristics are effective in problem identification using the modified set. The second study was conducted using a system which was developed to ascertain if the modified set was effective at identifying usability problems that could be fixed before the release of software. The post-study analysis revealed that the majority of the usability problems identified by the experts were fixed in the updated version of the system.

  9. An effective selection method for low-mass active black holes and first spectroscopic identification

    NASA Astrophysics Data System (ADS)

    Morokuma, Tomoki; Tominaga, Nozomu; Tanaka, Masaomi; Yasuda, Naoki; Furusawa, Hisanori; Taniguchi, Yuki; Kato, Takahiro; Jiang, Ji-an; Nagao, Tohru; Kuncarayakti, Hanindyo; Morokuma-Matsui, Kana; Ikeda, Hiroyuki; Blinnikov, Sergei; Nomoto, Ken'ichi; Kokubo, Mitsuru; Doi, Mamoru

    2016-06-01

    We present a new method for effectively selecting objects which may be low-mass active black holes (BHs) at galaxy centers using high-cadence optical imaging data, and our first spectroscopic identification of an active 2.7 × 106 M⊙ BH at z = 0.164. This active BH was originally selected due to its rapid optical variability, from a few hours to a day, based on Subaru Hyper Suprime-Cam g-band imaging data taken with a 1 hr cadence. Broad and narrow Hα lines and many other emission ones are detected in our optical spectra taken with Subaru FOCAS, and the BH mass is measured via the broad Hα emission line width (1880 km s-1) and luminosity (4.2 × 1040 erg s-1) after careful correction to the atmospheric absorption around 7580-7720 Å. We measure the Eddington ratio and find it to be as low as 0.05, considerably smaller than those in a previous SDSS sample with similar BH mass and redshift, which indicates one of the special potentials of our Subaru survey. The g - r color and morphology of the extended component indicate that the host galaxy is a star-forming galaxy. We also show the effectiveness of our variability selection for low-mass active BHs.

  10. Identification of a nucleoside analog active against adenosine kinase-expressing plasma cell malignancies.

    PubMed

    Nayar, Utthara; Sadek, Jouliana; Reichel, Jonathan; Hernandez-Hopkins, Denise; Akar, Gunkut; Barelli, Peter J; Sahai, Michelle A; Zhou, Hufeng; Totonchy, Jennifer; Jayabalan, David; Niesvizky, Ruben; Guasparri, Ilaria; Hassane, Duane; Liu, Yifang; Sei, Shizuko; Shoemaker, Robert H; Warren, J David; Elemento, Olivier; Kaye, Kenneth M; Cesarman, Ethel

    2017-06-01

    Primary effusion lymphoma (PEL) is a largely incurable malignancy of B cell origin with plasmacytic differentiation. Here, we report the identification of a highly effective inhibitor of PEL. This compound, 6-ethylthioinosine (6-ETI), is a nucleoside analog with toxicity to PEL in vitro and in vivo, but not to other lymphoma cell lines tested. We developed and performed resistome analysis, an unbiased approach based on RNA sequencing of resistant subclones, to discover the molecular mechanisms of sensitivity. We found different adenosine kinase-inactivating (ADK-inactivating) alterations in all resistant clones and determined that ADK is required to phosphorylate and activate 6-ETI. Further, we observed that 6-ETI induces ATP depletion and cell death accompanied by S phase arrest and DNA damage only in ADK-expressing cells. Immunohistochemistry for ADK served as a biomarker approach to identify 6-ETI-sensitive tumors, which we documented for other lymphoid malignancies with plasmacytic features. Notably, multiple myeloma (MM) expresses high levels of ADK, and 6-ETI was toxic to MM cell lines and primary specimens and had a robust antitumor effect in a disseminated MM mouse model. Several nucleoside analogs are effective in treating leukemias and T cell lymphomas, and 6-ETI may fill this niche for the treatment of PEL, plasmablastic lymphoma, MM, and other ADK-expressing cancers.

  11. The origin and evolution of assessment criteria for persistent, bioaccumulative and toxic (PBT) chemicals and persistent organic pollutants (POPs).

    PubMed

    Matthies, Michael; Solomon, Keith; Vighi, Marco; Gilman, Andy; Tarazona, Jose V

    2016-09-14

    General public concern over the effects of persistent chemicals began in the early 1960s. Since then, significant scientific advances have increased our understanding of persistent, bioaccumulative, and toxic (PBT) chemicals and the properties and processes that influence their fates in, and adverse effects on, human health and the environment. In addition to the scientific advances, a number of legislations and agreements for national, international, and global identification and control of PBT chemicals have been adopted. However, some of the rationales and thoughts that were relied upon when the first criteria were developed to identify and categorize PBT chemicals and then POPs (persistent organic pollutants) have not been carried forward. Criteria have been based upon available data of neutral hydrophobic substances as reference chemicals, derived under laboratory conditions. They evolved over the last decades due to the diversification of the protection aims under various national regulatory frameworks and international agreements, advances in methods for estimation of physical/chemical properties, and the identification of chemicals which are non-traditional POPs. Criteria are not defined purely by science; they also are subject to the aims of policy. This paper offers a historical perspective on the development of criteria for PBT chemicals and POPs. It also offers suggestions for rationalization of protection goals, describes some emerging procedures for identification of compounds of concern, and proposes information that needs to be considered when applying criteria to screening and/or evaluation of new chemicals.

  12. [Applylication of new type combined fragments: nrDNA ITS+ nad 1-intron 2 for identification of Dendrobium species of Fengdous].

    PubMed

    Geng, Li-xia; Zheng, Rui; Ren, Jie; Niu, Zhi-tao; Sun, Yu-long; Xue, Qing-yun; Liu, Wei; Ding, Xiao-yu

    2015-08-01

    In this study, 17 kinds of Dendrobium species of Fengdous including 39 individuals were collected from 4 provinces. Mitochondrial gene sequences co I, nad 5, nad 1-intron 2 and chloroplast gene sequences rbcL, matK amd psbA-trnH were amplified from these materials, as well as nrDNA ITS. Furthermore, suitable sequences for identification of Dendrobium species of Fengdous were screened by K-2-P and P-distance. The results showed that during the mentioned 7 sequences, nrDNA ITS, nad 1-intron 2 and psbA-trnH which had a high degree of variability could be used to identify Dendrobium species of Fengdous. However, single fragment could not be used to distinguish D. moniliforme and D. huoshanense. Moreover, compared to other combined fragments, new type combined fragments nrDNA ITS+nad 1-intron 2 was more effective in identifying the original plants of Dendrobium species and could be used to identify D. huoshanense and D. moniliforme. Besides, according to the UPGMA tree constructed with nrDNA ITS+nad 1-intron 2, 3 inspected Dendrobium plants were identified as D. huoshanense, D. moniliforme and D. officinale, respectively. This study identified Dendrobium species of Fengdous by combined fragments nrDNA ITS+nad 1-intron 2 for the first time, which provided a more effective basis for identification of Dendrobium species. And this study will be helpful for regulating the market of Fengdous.

  13. Evaluating the Use of Synthetic Replicas for SEM Identification of Bloodstains (with Emphasis on Archaeological and Ethnographic Artifacts).

    PubMed

    Hortolà, Policarp

    2015-12-01

    Some archaeological or ethnographic specimens are unavailable for direct examination using a scanning electron microscope (SEM) due to methodological obstacles or legal issues. In order to assess the feasibility of using SEM synthetic replicas for the identification of bloodstains (BSs) via morphology of red blood cells (RBCs), three fragments of different natural raw material (inorganic, stone; plant, wood; animal, shell) were smeared with peripheral human blood. Afterwards, molds and casts of the bloodstained areas were made using vinyl polysiloxane (VPS) silicone impression and polyurethane (PU) resin casting material, respectively. Then, the original samples and the resulting casts were coated with gold and examined in secondary-electron mode using a high-vacuum SEM. Results suggest that PU resin casts obtained from VPS silicone molds can preserve RBC morphology in BSs, and consequently that synthetic replicas are feasible for SEM identification of BSs on cultural heritage specimens made of natural raw materials. Although the focus of this study was on BSs, the method reported in this paper may be applicable to organic residues other than blood, as well as to the surface of other specimens when, for any reason, the original is unavailable for an SEM.

  14. Estimation on nonlinear damping in second order distributed parameter systems

    NASA Technical Reports Server (NTRS)

    Banks, H. T.; Reich, Simeon; Rosen, I. G.

    1989-01-01

    An approximation and convergence theory for the identification of nonlinear damping in abstract wave equations is developed. It is assumed that the unknown dissipation mechanism to be identified can be described by a maximal monotone operator acting on the generalized velocity. The stiffness is assumed to be linear and symmetric. Functional analytic techniques are used to establish that solutions to a sequence of finite dimensional (Galerkin) approximating identification problems in some sense approximate a solution to the original infinite dimensional inverse problem.

  15. Metabolic identification of germs isolated from ozonized water mixed with underground water

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fransolet, G.; Villers, G.; Goyens, A.

    Twenty bacterial strains having shown a characteristic regrowth, starting from surface water treated and ozonized and then mixed with water of underground origin have been isolated. After verification of the purity of these strains, their preliminary identification has been attempted by utilizing more than 60 tests. The identification was limited to biochemical tests based on the following types of metabolism: energetic metabolism, carbohydrate metabolism, lipid metabolism, proteic metabolism, nutritional metabolism, and utilization of special media. In support of the results, one is able to affirm that the 20 strains belong to seven families consisting of Pseudomonadaceae, Bacillaceae, the group ofmore » Coryneformes, the Azotobactericeae, Micrococcaceae, Enterobacteriaceae and Vibrionaceae.« less

  16. Cultural and social determinants of health among indigenous Mexican migrants in the United States.

    PubMed

    Lee, Junghee; Donlan, William; Cardoso, Edgar Ezequiel Orea; Paz, Juan Jesus

    2013-01-01

    Despite growing numbers, indigenous Mexican migrants are relatively invisible to health practitioners who group them with nonindigenous, mestizo Mexican-origin populations. Associations between indigenous and mestizo cultural identifications with psychosocial characteristics and health indicators among indigenous Mexican migrants were examined. Results revealed gender differences in cultural identifications, perceived discrimination, self-esteem, self-efficacy, and various health indicators including depression severity, culture-bound syndromes, and self-rated health. Multivariate regression and structural equation path modeling demonstrated how indigenous cultural identification and perceived discrimination affects health. Findings suggest that interventions should utilize indigenous community-based activities designed to promote self-esteem and the value of indigenous culture, with a focus on females.

  17. 40 CFR 52.1100 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Department of Health and Mental Hygiene on March 30, 1987, consisting of amendments to the Good Engineering... definition for the term web printing; and renumbering of all definitions. (11) Amendments to COMAR 26.11.19...

  18. 40 CFR 52.2063 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... transmitting source-specific VOC and/or NOx RACT determinations in the form of plan approvals and/or operating... VOC and/or NOx RACT determinations in the form of plan approvals and/or operating permits for the...

  19. 40 CFR 52.2063 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... transmitting source-specific VOC and/or NOx RACT determinations in the form of plan approvals and/or operating... VOC and/or NOx RACT determinations in the form of plan approvals and/or operating permits for the...

  20. 40 CFR 52.2063 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... transmitting source-specific VOC and/or NOx RACT determinations in the form of plan approvals and/or operating... VOC and/or NOx RACT determinations in the form of plan approvals and/or operating permits for the...

  1. 40 CFR 52.2063 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... transmitting source-specific VOC and/or NOx RACT determinations in the form of plan approvals and/or operating... VOC and/or NOx RACT determinations in the form of plan approvals and/or operating permits for the...

  2. 40 CFR 52.2299 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... high pour point crude oil) and Regulation V (i.e., sections 115.101-106, section 115.191 (9) and (10.... Based on the availability of enhanced emissions and monitoring data, as well as more sophisticated...

  3. [Rapid identification of hogwash oil by using synchronous fluorescence spectroscopy].

    PubMed

    Sun, Yan-Hui; An, Hai-Yang; Jia, Xiao-Li; Wang, Juan

    2012-10-01

    To identify hogwash oil quickly, the characteristic delta lambda of hogwash oil was analyzed by three dimensional fluorescence spectroscopy with parallel factor analysis, and the model was built up by using synchronous fluorescence spectroscopy with support vector machines (SVM). The results showed that the characteristic delta lambda of hogwash oil was 60 nm. Collecting original spectrum of different samples under the condition of characteristic delta lambda 60 nm, the best model was established while 5 principal components were selected from original spectrum and the radial basis function (RBF) was used as the kernel function, and the optimal penalty factor C and kernel function g were 512 and 0.5 respectively obtained by the grid searching and 6-fold cross validation. The discrimination rate of the model was 100% for both training sets and prediction sets. Thus, it is quick and accurate to apply synchronous fluorescence spectroscopy to identification of hogwash oil.

  4. Detection of mycoloylglycerol by thin-layer chromatography as a tool for the rapid inclusion of corynebacteria of clinical origin in the genus Corynebacterium.

    PubMed

    Yagüe, G; Segovia, M; Valero-Guillén, P L

    2000-01-28

    A chemotaxonomic study of some corynebacteria isolated from clinical samples revealed characteristic thin-layer chromatographic patterns for meso-diaminopimelic acid containing species included in the genera Corynebacterium, Dermabacter and Brevibacterium. Notably, a specific compound was consistently detected in mycolic acid containing species of the genus Corynebacterium. This compound was composed by glycerol and mycolic acids and structural analyses carried out by fast atom bombardment mass spectrometry in C. minutissimum confirmed its identification as mycoloylglycerol. The chain length of mycoloyl groups in this molecule ranged from 28 to 34 carbon atoms, being mono-, di- or triunsaturated. Detection of mycoloylglycerol by thin-layer chromatography may be thus useful for the rapid inclusion of a great variety of corynebacteria of clinical origin in the genus Corynebacterium in laboratories employing chromatographic techniques as an adjunct for the identification of these microorganisms.

  5. An IR-Based Approach Utilizing Query Expansion for Plagiarism Detection in MEDLINE.

    PubMed

    Nawab, Rao Muhammad Adeel; Stevenson, Mark; Clough, Paul

    2017-01-01

    The identification of duplicated and plagiarized passages of text has become an increasingly active area of research. In this paper, we investigate methods for plagiarism detection that aim to identify potential sources of plagiarism from MEDLINE, particularly when the original text has been modified through the replacement of words or phrases. A scalable approach based on Information Retrieval is used to perform candidate document selection-the identification of a subset of potential source documents given a suspicious text-from MEDLINE. Query expansion is performed using the ULMS Metathesaurus to deal with situations in which original documents are obfuscated. Various approaches to Word Sense Disambiguation are investigated to deal with cases where there are multiple Concept Unique Identifiers (CUIs) for a given term. Results using the proposed IR-based approach outperform a state-of-the-art baseline based on Kullback-Leibler Distance.

  6. The use of immunochromatographic rapid test for soft tissue remains identification in order to distinguish between human and non-human origin.

    PubMed

    Gascho, Dominic; Morf, Nadja V; Thali, Michael J; Schaerli, Sarah

    2017-05-01

    Clear identification of soft tissue remains as being of non-human origin may be visually difficult in some cases e.g. due to decomposition. Thus, an additional examination is required. The use of an immunochromatographic rapid tests (IRT) device can be an easy solution with the additional advantage to be used directly at the site of discovery. The use of these test devices for detecting human blood at crime scenes is a common method. However, the IRT is specific not only for blood but also for differentiation between human and non-human soft tissue remains. In the following this method is discussed and validated by means of two forensic cases and several samples of various animals. Copyright © 2017 The Chartered Society of Forensic Sciences. Published by Elsevier B.V. All rights reserved.

  7. Active thermography and post-processing image enhancement for recovering of abraded and paint-covered alphanumeric identification marks

    NASA Astrophysics Data System (ADS)

    Montanini, R.; Quattrocchi, A.; Piccolo, S. A.

    2016-09-01

    Alphanumeric marking is a common technique employed in industrial applications for identification of products. However, the realised mark can undergo deterioration, either by extensive use or voluntary deletion (e.g. removal of identification numbers of weapons or vehicles). For recovery of the lost data many destructive or non-destructive techniques have been endeavoured so far, which however present several restrictions. In this paper, active infrared thermography has been exploited for the first time in order to assess its effectiveness in restoring paint covered and abraded labels made by means of different manufacturing processes (laser, dot peen, impact, cold press and scribe). Optical excitation of the target surface has been achieved using pulse (PT), lock-in (LT) and step heating (SHT) thermography. Raw infrared images were analysed with a dedicated image processing software originally developed in Matlab™, exploiting several methods, which include thermographic signal reconstruction (TSR), guided filtering (GF), block guided filtering (BGF) and logarithmic transformation (LN). Proper image processing of the raw infrared images resulted in superior contrast and enhanced readability. In particular, for deeply abraded marks, good outcomes have been obtained by application of logarithmic transformation to raw PT images and block guided filtering to raw phase LT images. With PT and LT it was relatively easy to recover labels covered by paint, with the latter one providing better thermal contrast for all the examined targets. Step heating thermography never led to adequate label identification instead.

  8. Cytochrome C oxidase subunit I barcodes provide an efficient tool for Jinqian Baihua She (Bungarus parvus) authentication

    PubMed Central

    Chao, Zhi; Liao, Jing; Liang, Zhenbiao; Huang, Suhua; Zhang, Liang; Li, Junde

    2014-01-01

    Objective: To test the feasibility of DNA barcoding for accurate identification of Jinqian Baihua She and its adulterants. Materials and Methods: Standard cytochrome C oxidase subunit I (COI) gene fragments were sequenced for DNA barcoding of 39 samples from 9 snake species, including Bungarus multicinctus, the officially recognized origin animal by Chinese Pharmacopoeia, and other 8 adulterate species. The aligned sequences, 658 base pairs in length, were analyzed for divergence using the Kimura-2-parameter (K2P) distance model with MEGA5.0. Results: The mean intraspecific K2P distance was 0.0103 and the average interspecific genetic distance was 0.2178 in B. multicinctus, far greater than the minimal interspecific genetic distance of 0.027 recommended for species identification. A neighbor-joining (NJ) tree was constructed, in which each species formed a monophyletic clade with bootstrap supports of 100%. All the data were submitted to Barcode of Life Data system version 3.0 (BOLD, http://www.barcodinglife.org) under the project title “DNA barcoding Bungarus multicinctus and its adulterants”. Ten samples of commercially available crude drugs of JBS were identified using the identification engine provided by BOLD. All the samples were clearly identified at the species level, among which five were found to be the adulterants and identified as Dinodon rufozonatum. Conclusion: DNA barcoding using the standard COI gene fragments provides an effective and accurate means for JBS identification and authentication. PMID:25422545

  9. Optical/digital identification/verification system based on digital watermarking technology

    NASA Astrophysics Data System (ADS)

    Herrigel, Alexander; Voloshynovskiy, Sviatoslav V.; Hrytskiv, Zenon D.

    2000-06-01

    This paper presents a new approach for the secure integrity verification of driver licenses, passports or other analogue identification documents. The system embeds (detects) the reference number of the identification document with the DCT watermark technology in (from) the owner photo of the identification document holder. During verification the reference number is extracted and compared with the reference number printed in the identification document. The approach combines optical and digital image processing techniques. The detection system must be able to scan an analogue driver license or passport, convert the image of this document into a digital representation and then apply the watermark verification algorithm to check the payload of the embedded watermark. If the payload of the watermark is identical with the printed visual reference number of the issuer, the verification was successful and the passport or driver license has not been modified. This approach constitutes a new class of application for the watermark technology, which was originally targeted for the copyright protection of digital multimedia data. The presented approach substantially increases the security of the analogue identification documents applied in many European countries.

  10. Evaluation of Earthquake Detection Performance in Terms of Quality and Speed in SEISCOMP3 Using New Modules Qceval, Npeval and Sceval

    NASA Astrophysics Data System (ADS)

    Roessler, D.; Weber, B.; Ellguth, E.; Spazier, J.

    2017-12-01

    The geometry of seismic monitoring networks, site conditions and data availability as well as monitoring targets and strategies typically impose trade-offs between data quality, earthquake detection sensitivity, false detections and alert times. Network detection capabilities typically change with alteration of the seismic noise level by human activity or by varying weather and sea conditions. To give helpful information to operators and maintenance coordinators, gempa developed a range of tools to evaluate earthquake detection and network performance including qceval, npeval and sceval. qceval is a module which analyzes waveform quality parameters in real-time and deactivates and reactivates data streams based on waveform quality thresholds for automatic processing. For example, thresholds can be defined for latency, delay, timing quality, spikes and gaps count and rms. As changes in the automatic processing have a direct influence on detection quality and speed, another tool called "npeval" was designed to calculate in real-time the expected time needed to detect and locate earthquakes by evaluating the effective network geometry. The effective network geometry is derived from the configuration of stations participating in the detection. The detection times are shown as an additional layer on the map and updated in real-time as soon as the effective network geometry changes. Yet another new tool, "sceval", is an automatic module which classifies located seismic events (Origins) in real-time. sceval evaluates the spatial distribution of the stations contributing to an Origin. It confirms or rejects the status of Origins, adds comments or leaves the Origin unclassified. The comments are passed to an additional sceval plug-in where the end user can customize event types. This unique identification of real and fake events in earthquake catalogues allows to lower network detection thresholds. In real-time monitoring situations operators can limit the processing to events with unclassified Origins, reducing their workload. Classified Origins can be treated specifically by other procedures. These modules have been calibrated and fully tested by several complex seismic monitoring networks in the region of Indonesia and Northern Chile.

  11. A Galerkin method for the estimation of parameters in hybrid systems governing the vibration of flexible beams with tip bodies

    NASA Technical Reports Server (NTRS)

    Banks, H. T.; Rosen, I. G.

    1985-01-01

    An approximation scheme is developed for the identification of hybrid systems describing the transverse vibrations of flexible beams with attached tip bodies. In particular, problems involving the estimation of functional parameters are considered. The identification problem is formulated as a least squares fit to data subject to the coupled system of partial and ordinary differential equations describing the transverse displacement of the beam and the motion of the tip bodies respectively. A cubic spline-based Galerkin method applied to the state equations in weak form and the discretization of the admissible parameter space yield a sequence of approximating finite dimensional identification problems. It is shown that each of the approximating problems admits a solution and that from the resulting sequence of optimal solutions a convergent subsequence can be extracted, the limit of which is a solution to the original identification problem. The approximating identification problems can be solved using standard techniques and readily available software.

  12. Rapid Molecular Identification of Human Taeniid Cestodes by Pyrosequencing Approach

    PubMed Central

    Thanchomnang, Tongjit; Tantrawatpan, Chairat; Intapan, Pewpan M.; Sanpool, Oranuch; Janwan, Penchom; Lulitanond, Viraphong; Tourtip, Somjintana; Yamasaki, Hiroshi; Maleewong, Wanchai

    2014-01-01

    Taenia saginata, T. solium, and T. asiatica are causative agents of taeniasis in humans. The difficulty of morphological identification of human taeniids can lead to misdiagnosis or confusion. To overcome this problem, several molecular methods have been developed, but use of these tends to be time-consuming. Here, a rapid and high-throughput pyrosequencing approach was developed for the identification of three human taeniids originating from various countries. Primers targeting the mitochondrial cytochrome c oxidase subunit 1 (cox1) gene of the three Taenia species were designed. Variations in a 26-nucleotide target region were used for identification. The reproducibility and accuracy of the pyrosequencing technology was confirmed by Sanger sequencing. This technique will be a valuable tool to distinguish between sympatric human taeniids that occur in Thailand, Asia and Pacific countries. This method could potentially be used for the molecular identification of the taeniid species that might be associated with suspicious cysts and lesions, or cyst residues in humans or livestock at the slaughterhouse. PMID:24945530

  13. An Improved Algorithm of Congruent Matching Cells (CMC) Method for Firearm Evidence Identifications

    PubMed Central

    Tong, Mingsi; Song, John; Chu, Wei

    2015-01-01

    The Congruent Matching Cells (CMC) method was invented at the National Institute of Standards and Technology (NIST) for firearm evidence identifications. The CMC method divides the measured image of a surface area, such as a breech face impression from a fired cartridge case, into small correlation cells and uses four identification parameters to identify correlated cell pairs originating from the same firearm. The CMC method was validated by identification tests using both 3D topography images and optical images captured from breech face impressions of 40 cartridge cases fired from a pistol with 10 consecutively manufactured slides. In this paper, we discuss the processing of the cell correlations and propose an improved algorithm of the CMC method which takes advantage of the cell correlations at a common initial phase angle and combines the forward and backward correlations to improve the identification capability. The improved algorithm is tested by 780 pairwise correlations using the same optical images and 3D topography images as the initial validation. PMID:26958441

  14. Writer identification on historical Glagolitic documents

    NASA Astrophysics Data System (ADS)

    Fiel, Stefan; Hollaus, Fabian; Gau, Melanie; Sablatnig, Robert

    2013-12-01

    This work aims at automatically identifying scribes of historical Slavonic manuscripts. The quality of the ancient documents is partially degraded by faded-out ink or varying background. The writer identification method used is based on image features, which are described with Scale Invariant Feature Transform (SIFT) features. A visual vocabulary is used for the description of handwriting characteristics, whereby the features are clustered using a Gaussian Mixture Model and employing the Fisher kernel. The writer identification approach is originally designed for grayscale images of modern handwritings. But contrary to modern documents, the historical manuscripts are partially corrupted by background clutter and water stains. As a result, SIFT features are also found on the background. Since the method shows also good results on binarized images of modern handwritings, the approach was additionally applied on binarized images of the ancient writings. Experiments show that this preprocessing step leads to a significant performance increase: The identification rate on binarized images is 98.9%, compared to an identification rate of 87.6% gained on grayscale images.

  15. An Improved Algorithm of Congruent Matching Cells (CMC) Method for Firearm Evidence Identifications.

    PubMed

    Tong, Mingsi; Song, John; Chu, Wei

    2015-01-01

    The Congruent Matching Cells (CMC) method was invented at the National Institute of Standards and Technology (NIST) for firearm evidence identifications. The CMC method divides the measured image of a surface area, such as a breech face impression from a fired cartridge case, into small correlation cells and uses four identification parameters to identify correlated cell pairs originating from the same firearm. The CMC method was validated by identification tests using both 3D topography images and optical images captured from breech face impressions of 40 cartridge cases fired from a pistol with 10 consecutively manufactured slides. In this paper, we discuss the processing of the cell correlations and propose an improved algorithm of the CMC method which takes advantage of the cell correlations at a common initial phase angle and combines the forward and backward correlations to improve the identification capability. The improved algorithm is tested by 780 pairwise correlations using the same optical images and 3D topography images as the initial validation.

  16. [Algorithm of toxigenic genetically altered Vibrio cholerae El Tor biovar strain identification].

    PubMed

    Smirnova, N I; Agafonov, D A; Zadnova, S P; Cherkasov, A V; Kutyrev, V V

    2014-01-01

    Development of an algorithm of genetically altered Vibrio cholerae biovar El Tor strai identification that ensures determination of serogroup, serovar and biovar of the studied isolate based on pheno- and genotypic properties, detection of genetically altered cholera El Tor causative agents, their differentiation by epidemic potential as well as evaluation of variability of key pathogenicity genes. Complex analysis of 28 natural V. cholerae strains was carried out by using traditional microbiological methods, PCR and fragmentary sequencing. An algorithm of toxigenic genetically altered V. cholerae biovar El Tor strain identification was developed that includes 4 stages: determination of serogroup, serovar and biovar based on phenotypic properties, confirmation of serogroup and biovar based on molecular-genetic properties determination of strains as genetically altered, differentiation of genetically altered strains by their epidemic potential and detection of ctxB and tcpA key pathogenicity gene polymorphism. The algorithm is based on the use of traditional microbiological methods, PCR and sequencing of gene fragments. The use of the developed algorithm will increase the effectiveness of detection of genetically altered variants of the cholera El Tor causative agent, their differentiation by epidemic potential and will ensure establishment of polymorphism of genes that code key pathogenicity factors for determination of origins of the strains and possible routes of introduction of the infection.

  17. MIDAS: a database-searching algorithm for metabolite identification in metabolomics.

    PubMed

    Wang, Yingfeng; Kora, Guruprasad; Bowen, Benjamin P; Pan, Chongle

    2014-10-07

    A database searching approach can be used for metabolite identification in metabolomics by matching measured tandem mass spectra (MS/MS) against the predicted fragments of metabolites in a database. Here, we present the open-source MIDAS algorithm (Metabolite Identification via Database Searching). To evaluate a metabolite-spectrum match (MSM), MIDAS first enumerates possible fragments from a metabolite by systematic bond dissociation, then calculates the plausibility of the fragments based on their fragmentation pathways, and finally scores the MSM to assess how well the experimental MS/MS spectrum from collision-induced dissociation (CID) is explained by the metabolite's predicted CID MS/MS spectrum. MIDAS was designed to search high-resolution tandem mass spectra acquired on time-of-flight or Orbitrap mass spectrometer against a metabolite database in an automated and high-throughput manner. The accuracy of metabolite identification by MIDAS was benchmarked using four sets of standard tandem mass spectra from MassBank. On average, for 77% of original spectra and 84% of composite spectra, MIDAS correctly ranked the true compounds as the first MSMs out of all MetaCyc metabolites as decoys. MIDAS correctly identified 46% more original spectra and 59% more composite spectra at the first MSMs than an existing database-searching algorithm, MetFrag. MIDAS was showcased by searching a published real-world measurement of a metabolome from Synechococcus sp. PCC 7002 against the MetaCyc metabolite database. MIDAS identified many metabolites missed in the previous study. MIDAS identifications should be considered only as candidate metabolites, which need to be confirmed using standard compounds. To facilitate manual validation, MIDAS provides annotated spectra for MSMs and labels observed mass spectral peaks with predicted fragments. The database searching and manual validation can be performed online at http://midas.omicsbio.org.

  18. Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples.

    PubMed

    Keller, A; Danner, N; Grimmer, G; Ankenbrand, M; von der Ohe, K; von der Ohe, W; Rost, S; Härtel, S; Steffan-Dewenter, I

    2015-03-01

    The identification of pollen plays an important role in ecology, palaeo-climatology, honey quality control and other areas. Currently, expert knowledge and reference collections are essential to identify pollen origin through light microscopy. Pollen identification through molecular sequencing and DNA barcoding has been proposed as an alternative approach, but the assessment of mixed pollen samples originating from multiple plant species is still a tedious and error-prone task. Next-generation sequencing has been proposed to avoid this hindrance. In this study we assessed mixed pollen probes through next-generation sequencing of amplicons from the highly variable, species-specific internal transcribed spacer 2 region of nuclear ribosomal DNA. Further, we developed a bioinformatic workflow to analyse these high-throughput data with a newly created reference database. To evaluate the feasibility, we compared results from classical identification based on light microscopy from the same samples with our sequencing results. We assessed in total 16 mixed pollen samples, 14 originated from honeybee colonies and two from solitary bee nests. The sequencing technique resulted in higher taxon richness (deeper assignments and more identified taxa) compared to light microscopy. Abundance estimations from sequencing data were significantly correlated with counted abundances through light microscopy. Simulation analyses of taxon specificity and sensitivity indicate that 96% of taxa present in the database are correctly identifiable at the genus level and 70% at the species level. Next-generation sequencing thus presents a useful and efficient workflow to identify pollen at the genus and species level without requiring specialised palynological expert knowledge. © 2014 German Botanical Society and The Royal Botanical Society of the Netherlands.

  19. Quarry identification of historical building materials by means of laser induced breakdown spectroscopy, X-ray fluorescence and chemometric analysis

    NASA Astrophysics Data System (ADS)

    Colao, F.; Fantoni, R.; Ortiz, P.; Vazquez, M. A.; Martin, J. M.; Ortiz, R.; Idris, N.

    2010-08-01

    To characterize historical building materials according to the geographic origin of the quarries from which they have been mined, the relative content of major and trace elements were determined by means of Laser Induced Breakdown Spectroscopy (LIBS) and X-ray Fluorescence (XRF) techniques. 48 different specimens were studied and the entire samples' set was divided in two different groups: the first, used as reference set, was composed by samples mined from eight different quarries located in Seville province; the second group was composed by specimens of unknown provenance collected in several historical buildings and churches in the city of Seville. Data reduction and analysis on laser induced breakdown spectroscopy and X-ray fluorescence measurements was performed using multivariate statistical approach, namely the Linear Discriminant Analysis (LDA), Principal Component Analysis (PCA) and Soft Independent Modeling of Class Analogy (SIMCA). A clear separation among reference sample materials mined from different quarries was observed in Principal Components (PC) score plots, then a supervised soft independent modeling of class analogy classification was trained and run, aiming to assess the provenance of unknown samples according to their elemental content. The obtained results were compared with the provenance assignments made on the basis of petrographical description. This work gives experimental evidence that laser induced breakdown spectroscopy measurements on a relatively small set of elements is a fast and effective method for the purpose of origin identification.

  20. Twenty years of the G protein-coupled estrogen receptor GPER: Historical and personal perspectives.

    PubMed

    Barton, Matthias; Filardo, Edward J; Lolait, Stephen J; Thomas, Peter; Maggiolini, Marcello; Prossnitz, Eric R

    2018-02-01

    Estrogens play a critical role in many aspects of physiology, particularly female reproductive function, but also in pathophysiology, and are associated with protection from numerous diseases in premenopausal women. Steroids and the effects of estrogen have been known for ∼90 years, with the first evidence for a receptor for estrogen presented ∼50 years ago. The original ancestral steroid receptor, extending back into evolution more than 500 million years, was likely an estrogen receptor, whereas G protein-coupled receptors (GPCRs) trace their origins back into history more than one billion years. The classical estrogen receptors (ERα and ERβ) are ligand-activated transcription factors that confer estrogen sensitivity upon many genes. It was soon apparent that these, or novel receptors may also be responsible for the "rapid"/"non-genomic" membrane-associated effects of estrogen. The identification of an orphan GPCR (GPR30, published in 1996) opened a new field of research with the description in 2000 that GPR30 expression is required for rapid estrogen signaling. In 2005-2006, the field was greatly stimulated by two studies that described the binding of estrogen to GPR30-expressing cell membranes, followed by the identification of a GPR30-selective agonist (that lacked binding and activity towards ERα and ERβ). Renamed GPER (G protein-coupled estrogen receptor) by IUPHAR in 2007, the total number of articles in PubMed related to this receptor recently surpassed 1000. In this article, the authors present personal perspectives on how they became involved in the discovery and/or advancement of GPER research. These areas include non-genomic effects on vascular tone, receptor cloning, molecular and cellular biology, signal transduction mechanisms and pharmacology of GPER, highlighting the roles of GPER and GPER-selective compounds in diseases such as obesity, diabetes, and cancer and the obligatory role of GPER in propagating cardiovascular aging, arterial hypertension and heart failure through the stimulation of Nox expression. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. Real-time measurements of radon activity with the Timepix-based RADONLITE and RADONPIX detectors

    NASA Astrophysics Data System (ADS)

    Caresana, M.; Garlati, L.; Murtas, F.; Romano, S.; Severino, C. T.; Silari, M.

    2014-11-01

    Radon gas is the most important source of ionizing radiation among those of natural origin. Two new systems for radon measurement based on the Timepix silicon detector were developed. The positively charged radon daughters are electrostatically collected on the surface of the Si detector and their energy spectrum measured. Pattern recognition of the tracks on the sensor and particle identification are used to determine number and energy of the alpha particles and to subtract the background, allowing for efficient radon detection. The systems include an algorithm for real-time measurement of the radon concentration and the calculation of the effective dose to the lungs.

  2. Method of identification of patent trends based on descriptions of technical functions

    NASA Astrophysics Data System (ADS)

    Korobkin, D. M.; Fomenkov, S. A.; Golovanchikov, A. B.

    2018-05-01

    The use of the global patent space to determine the scientific and technological priorities for the technical systems development (identifying patent trends) allows one to forecast the direction of the technical systems development and, accordingly, select patents of priority technical subjects as a source for updating the technical functions database and physical effects database. The authors propose an original method that uses as trend terms not individual unigrams or n-gram (usually for existing methods and systems), but structured descriptions of technical functions in the form “Subject-Action-Object” (SAO), which in the authors’ opinion are the basis of the invention.

  3. Timetable for oral prevention in childhood--developing dentition and oral habits: a current opinion.

    PubMed

    Majorana, Alessandra; Bardellini, Elena; Amadori, Francesca; Conti, Giulio; Polimeni, Antonella

    2015-01-01

    As most of the etiologic factors of malocclusion are of genetic origin and thus cannot be prevented, environmental causative factors have become the focus for correction. Early interception of oral habits may be an important step in order to prevent occlusal disturbances in children. The identification of an abnormal habit and the assessment of its potential immediate and long-term effects on the dentition and potentially on the craniofacial complex should be made at an early stage. This paper focuses on the most common oral habits influencing dentofacial growth in childhood and management of these habits in the developing dentition.

  4. Science of science.

    PubMed

    Fortunato, Santo; Bergstrom, Carl T; Börner, Katy; Evans, James A; Helbing, Dirk; Milojević, Staša; Petersen, Alexander M; Radicchi, Filippo; Sinatra, Roberta; Uzzi, Brian; Vespignani, Alessandro; Waltman, Ludo; Wang, Dashun; Barabási, Albert-László

    2018-03-02

    Identifying fundamental drivers of science and developing predictive models to capture its evolution are instrumental for the design of policies that can improve the scientific enterprise-for example, through enhanced career paths for scientists, better performance evaluation for organizations hosting research, discovery of novel effective funding vehicles, and even identification of promising regions along the scientific frontier. The science of science uses large-scale data on the production of science to search for universal and domain-specific patterns. Here, we review recent developments in this transdisciplinary field. Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  5. Aptamer-siRNA Chimeras: Discovery, Progress, and Future Prospects

    PubMed Central

    Kruspe, Sven; Giangrande, Paloma H.

    2017-01-01

    Synthetic nucleic acid ligands (aptamers) have emerged as effective delivery tools for many therapeutic oligonucleotide-based drugs, including small interfering RNAs (siRNAs). In this review, we summarize recent progress in the aptamer selection technology that has made possible the identification of cell-specific, cell-internalizing aptamers for the cell-targeted delivery of therapeutic oligonucleotides. In addition, we review the original, proof-of-concept aptamer-siRNA delivery studies and discuss recent advances in aptamer-siRNA conjugate designs for applications ranging from cancer therapy to the development of targeted antivirals. Challenges and prospects of aptamer-targeted siRNA drugs for clinical development are further highlighted. PMID:28792479

  6. Defects and Impurities in 4H- and 6H-SiC Homoepitaxial Layers: Identification, Origin, Effect on Properties of Ohmic Contacts and Insulating Layers and Reduction.

    DTIC Science & Technology

    1997-03-01

    Grant #N00014-95-l-1080 Office of the Chief of Naval Research Report for the period 1/1/97-3/31/97 R. F. Davis, M. O. Aboelfotoh , B. J. Baliga*, R. J...Contacts and Insulating Layers and Reduction . AUTHOR(S) R. F. Davis, M. O. Aboelfotoh , B. J. Baliga and R. J. Nemanich 5. FUNDING NUMBERS ydl4951... Aboelfotoh , B. J. Baliga, R. J. Nemanich, M. C. Benjamin, S. W. King, M. L. O’Brien, L. S. Porter, S. Sridevan, and H. S. Tomozawa, Quarterly Technical

  7. Prospective Identification of Oligoclonal/Abnormal Band of the Same Immunoglobulin Type as the Malignant Clone by Differential Location of M-Spike and Oligoclonal Band.

    PubMed

    Vyas, Shikhar G; Singh, Gurmukh

    2017-10-01

    Serum and urine protein electrophoreses and immunofixation electrophoreses are the gold standards in diagnosing monoclonal gammopathy. Identification of oligoclonal bands in post-treatment patients has emerged as an important issue and recording the location of the malignant monoclonal peak may facilitate prospective identification of a new "monoclonal" spike as being distinct from the malignant peak. We recorded the locations of monoclonal spikes in descriptive terms, such as being in the cathodal region, mid-gamma region, anodal region, and beta region. The location of monoclonal or restricted heterogeneity bands in subsequent protein electrophoreses was compared to the location of the original malignant spike. In a patient with plasma cell myeloma, the original monoclonal IgG kappa band was located at the anodal end of gamma region. Post-treatment, an IgG kappa band was noted in mid-gamma region and the primary malignant clone was not detectable by serum protein immunofixation electrophoresis (SIFE) in post-treatment sample. Even though the κ/λ ratio remained abnormal, we were able to recognize stringent complete response by noting the different location of the new IgG kappa band as a benign regenerative process. Recording the location of the malignant monoclonal spike facilitates the identification of post-treatment oligoclonal bands, prospectively. Recognizing the regenerative, benign, bands in post-transplant patients facilitates the determination of stringent complete response despite an abnormal κ/λ ratio.

  8. Identification of RNA molecules by specific enzyme digestion and mass spectrometry: software for and implementation of RNA mass mapping

    PubMed Central

    Matthiesen, Rune; Kirpekar, Finn

    2009-01-01

    The idea of identifying or characterizing an RNA molecule based on a mass spectrum of specifically generated RNA fragments has been used in various forms for well over a decade. We have developed software—named RRM for ‘RNA mass mapping’—which can search whole prokaryotic genomes or RNA FASTA sequence databases to identify the origin of a given RNA based on a mass spectrum of RNA fragments. As input, the program uses the masses of specific RNase cleavage of the RNA under investigation. RNase T1 digestion is used here as a demonstration of the usability of the method for RNA identification. The concept for identification is that the masses of the digestion products constitute a specific fingerprint, which characterize the given RNA. The search algorithm is based on the same principles as those used in peptide mass fingerprinting, but has here been extended to work for both RNA sequence databases and for genome searches. A simple and powerful probability model for ranking RNA matches is proposed. We demonstrate viability of the entire setup by identifying the DNA template of a series of RNAs of biological and of in vitro transcriptional origin in complete microbial genomes and by identifying authentic 16S ribosomal RNAs in a ‘small ribosomal subunit RNA’ database. Thus, we present a new tool for a rapid identification of unknown RNAs using only a few picomoles of starting material. PMID:19264806

  9. Fecal Source Identification with Real-Time Quantitative PCR

    EPA Science Inventory

    Waterborne diseases that originate from fecal pollution remain a significant public health issue. Current fecal indicator technologies recommended by the U.S. Environmental Protection Agency for water quality testing do not discriminate between different animal sources of fecal ...

  10. Identification and Analysis of Partial Shading Breakdown Sites in CuIn xGa (1-x)Se 2 Modules

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Palmiotti, Elizabeth; Johnston, Steven; Gerber, Andreas

    In this paper, CuIn xGa (1-x) (CIGS) mini-modules are stressed under reverse bias, resembling partial shading conditions, to predict and characterize where failures occur. Partial shading can cause permanent damage in the form of 'wormlike' defects on thin-film modules due to thermal runaway. This results in module-scale power losses. We have used dark lock-in thermography (DLIT) to spatially observe localized heating when reverse-bias breakdown occurs on various CIGS mini-modules. For better understanding of how and where these defects originated and propagated, we have developed techniques where the current is limited during reverse-bias stressing. This allows for DLIT-based detection and detailedmore » studying of the region where breakdown is initiated before thermal runaway leads to permanent damage. Statistics of breakdown sites using current-limited conditions has allowed for reasonable identification of the as-grown defects where permanent breakdown will likely originate. Scanning electron microscope results and wormlike defect analysis show that breakdown originates in defects such as small pits, craters, or cracks in the CIGS layer, and the wormlike defects propagate near the top CIGS interface.« less

  11. Phenolic profiles of nectar and honey of Quillaja saponaria Mol. (Quillajaceae) as potential chemical markers.

    PubMed

    Montenegro, Gloria; Díaz-Forestier, Javiera; Fredes, Carolina; Rodríguez, Sharon

    2013-01-01

    Quillaja saponaria Mol. (Quillajaceae) is one of the most important melliferous species in Chile, mainly as a source of monofloral honey. Honey made by A. mellifera presents biological activity against pathogens and antioxidant capacity associated with the presence of phenolic compounds deriving from the nectar, as a result of bee honey foraging. The aim of this study was to identify and quantify the phenolic compounds from the floral nectar of Q. saponaria and the honey made in apiaries in the central zone, and compare the composition of the chromatographic profiles of nectar and honey to known phenolic compounds. The results obtained by HPLC-DAD (high-performance liquid chromatography with diode-array detection) showed a similar profile of phenolic compounds, in which gallic acid, myricetin, rutin, quercetin and naringenin were identified. The phenolic compounds detected could be used as a reference for future studies for determining potential chemical markers of this honey, complementing the present identification of honeys by determining their botanical origin. The identification of bioindicators of the floral origins for honey of this species could provide added value to honey commercialization by certifying the botanical origin of their chemical features and biological attributes.

  12. Identification and Analysis of Partial Shading Breakdown Sites in CuIn xGa (1-x)Se 2 Modules

    DOE PAGES

    Palmiotti, Elizabeth; Johnston, Steven; Gerber, Andreas; ...

    2017-12-20

    In this paper, CuIn xGa (1-x) (CIGS) mini-modules are stressed under reverse bias, resembling partial shading conditions, to predict and characterize where failures occur. Partial shading can cause permanent damage in the form of 'wormlike' defects on thin-film modules due to thermal runaway. This results in module-scale power losses. We have used dark lock-in thermography (DLIT) to spatially observe localized heating when reverse-bias breakdown occurs on various CIGS mini-modules. For better understanding of how and where these defects originated and propagated, we have developed techniques where the current is limited during reverse-bias stressing. This allows for DLIT-based detection and detailedmore » studying of the region where breakdown is initiated before thermal runaway leads to permanent damage. Statistics of breakdown sites using current-limited conditions has allowed for reasonable identification of the as-grown defects where permanent breakdown will likely originate. Scanning electron microscope results and wormlike defect analysis show that breakdown originates in defects such as small pits, craters, or cracks in the CIGS layer, and the wormlike defects propagate near the top CIGS interface.« less

  13. The reliability of information on work-related injuries available from hospitalisation data in Australia.

    PubMed

    McKenzie, Kirsten; Mitchell, Rebecca; Scott, Deborah Anne; Harrison, James Edward; McClure, Roderick John

    2009-08-01

    To examine the reliability of work-related activity coding for injury-related hospitalisations in Australia. A random sample of 4,373 injury-related hospital separations from 1 July 2002 to 30 June 2004 were obtained from a stratified random sample of 50 hospitals across four states in Australia. From this sample, cases were identified as work-related if they contained an ICD-10-AM work-related activity code (U73) allocated by either: (i) the original coder; (ii) an independent auditor, blinded to the original code; or (iii) a research assistant, blinded to both the original and auditor codes, who reviewed narrative text extracted from the medical record. The concordance of activity coding and number of cases identified as work-related using each method were compared. Of the 4,373 cases sampled, 318 cases were identified as being work-related using any of the three methods for identification. The original coder identified 217 and the auditor identified 266 work-related cases (68.2% and 83.6% of the total cases identified, respectively). Around 10% of cases were only identified through the text description review. The original coder and auditor agreed on the assignment of work-relatedness for 68.9% of cases. The best estimates of the frequency of hospital admissions for occupational injury underestimate the burden by around 32%. This is a substantial underestimate that has major implications for public policy, and highlights the need for further work on improving the quality and completeness of routine, administrative data sources for a more complete identification of work-related injuries.

  14. Pigment identification on ``Pietà'' of Barletta, example of Renaissance Apulian sculpture: A Raman microscopy study

    NASA Astrophysics Data System (ADS)

    Marano, D.; Catalano, I. M.; Monno, A.

    2006-08-01

    A study of the original painting layer of the "Pietà" of Barletta, a polychrome statue, important example of Renaissance Apulian sculpture, was performed by μ-Raman spectroscopy. Vermilion was identified in the original layer of the blood drops on Jesus knee. Lazurite was identified as the original blue pigment on Our Lady's veil and lace, currently a yellow ochre-like color. The use of lazurite demonstrates the historical-artistic importance of this polychrome statue, and supports the hypothesis that this artwork was probably commissioned by Our Lady's devotees to itinerant artists inspired by the more precious Vesperbilder model.

  15. Origin, development, and evolution of butterfly eyespots.

    PubMed

    Monteiro, Antónia

    2015-01-07

    This article reviews the latest developments in our understanding of the origin, development, and evolution of nymphalid butterfly eyespots. Recent contributions to this field include insights into the evolutionary and developmental origin of eyespots and their ancestral deployment on the wing, the evolution of eyespot number and eyespot sexual dimorphism, and the identification of genes affecting eyespot development and black pigmentation. I also compare features of old and more recently proposed models of eyespot development and propose a schematic for the genetic regulatory architecture of eyespots. Using this schematic I propose two hypotheses for why we observe limits to morphological diversity across these serially homologous traits.

  16. MAC, A System for Automatically IPR Identification, Collection and Distribution

    NASA Astrophysics Data System (ADS)

    Serrão, Carlos

    Controlling Intellectual Property Rights (IPR) in the Digital World is a very hard challenge. The facility to create multiple bit-by-bit identical copies from original IPR works creates the opportunities for digital piracy. One of the most affected industries by this fact is the Music Industry. The Music Industry has supported huge losses during the last few years due to this fact. Moreover, this fact is also affecting the way that music rights collecting and distributing societies are operating to assure a correct music IPR identification, collection and distribution. In this article a system for automating this IPR identification, collection and distribution is presented and described. This system makes usage of advanced automatic audio identification system based on audio fingerprinting technology. This paper will present the details of the system and present a use-case scenario where this system is being used.

  17. Various approaches in EPR identification of gamma-irradiated plant foodstuffs: A review.

    PubMed

    Aleksieva, Katerina I; Yordanov, Nicola D

    2018-03-01

    Irradiation of food in the world is becoming a preferred method for their sterilization and extending their shelf life. For the purpose of trade with regard to the rights of consumers is necessary marking of irradiated foodstuffs, and the use of appropriate methods for unambiguous identification of radiation treatment. One-third of the current standards of the European Union to identify irradiated foods use the method of the Electron Paramagnetic Resonance (EPR) spectroscopy. On the other hand the current standards for irradiated foods of plant origin have some weaknesses that led to the development of new methodologies for the identification of irradiated food. New approaches for EPR identification of radiation treatment of herbs and spices when the specific signal is absent or disappeared after irradiation are discussed. Direct EPR measurements of dried fruits and vegetables and different pretreatments for fresh samples are reviewed. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. A Survey and Proposed Framework on the Soft Biometrics Technique for Human Identification in Intelligent Video Surveillance System

    PubMed Central

    Kim, Min-Gu; Moon, Hae-Min; Chung, Yongwha; Pan, Sung Bum

    2012-01-01

    Biometrics verification can be efficiently used for intrusion detection and intruder identification in video surveillance systems. Biometrics techniques can be largely divided into traditional and the so-called soft biometrics. Whereas traditional biometrics deals with physical characteristics such as face features, eye iris, and fingerprints, soft biometrics is concerned with such information as gender, national origin, and height. Traditional biometrics is versatile and highly accurate. But it is very difficult to get traditional biometric data from a distance and without personal cooperation. Soft biometrics, although featuring less accuracy, can be used much more freely though. Recently, many researchers have been made on human identification using soft biometrics data collected from a distance. In this paper, we use both traditional and soft biometrics for human identification and propose a framework for solving such problems as lighting, occlusion, and shadowing. PMID:22919273

  19. An approximation theory for the identification of nonlinear distributed parameter systems

    NASA Technical Reports Server (NTRS)

    Banks, H. T.; Reich, Simeon; Rosen, I. G.

    1988-01-01

    An abstract approximation framework for the identification of nonlinear distributed parameter systems is developed. Inverse problems for nonlinear systems governed by strongly maximal monotone operators (satisfying a mild continuous dependence condition with respect to the unknown parameters to be identified) are treated. Convergence of Galerkin approximations and the corresponding solutions of finite dimensional approximating identification problems to a solution of the original finite dimensional identification problem is demonstrated using the theory of nonlinear evolution systems and a nonlinear analog of the Trotter-Kato approximation result for semigroups of bounded linear operators. The nonlinear theory developed here is shown to subsume an existing linear theory as a special case. It is also shown to be applicable to a broad class of nonlinear elliptic operators and the corresponding nonlinear parabolic partial differential equations to which they lead. An application of the theory to a quasilinear model for heat conduction or mass transfer is discussed.

  20. Viscoelastic material properties' identification using high speed full field measurements on vibrating plates

    NASA Astrophysics Data System (ADS)

    Giraudeau, A.; Pierron, F.

    2010-06-01

    The paper presents an experimental application of a method leading to the identification of the elastic and damping material properties of isotropic vibrating plates. The theory assumes that the searched parameters can be extracted from curvature and deflection fields measured on the whole surface of the plate at two particular instants of the vibrating motion. The experimental application consists in an original excitation fixture, a particular adaptation of an optical full-field measurement technique, a data preprocessing giving the curvature and deflection fields and finally in the identification process using the Virtual Fields Method (VFM). The principle of the deflectometry technique used for the measurements is presented. First results of identification on an acrylic plate are presented and compared to reference values. Details about a new experimental arrangement, currently in progress, is presented. It uses a high speed digital camera to over sample the full-field measurements.

  1. A survey and proposed framework on the soft biometrics technique for human identification in intelligent video surveillance system.

    PubMed

    Kim, Min-Gu; Moon, Hae-Min; Chung, Yongwha; Pan, Sung Bum

    2012-01-01

    Biometrics verification can be efficiently used for intrusion detection and intruder identification in video surveillance systems. Biometrics techniques can be largely divided into traditional and the so-called soft biometrics. Whereas traditional biometrics deals with physical characteristics such as face features, eye iris, and fingerprints, soft biometrics is concerned with such information as gender, national origin, and height. Traditional biometrics is versatile and highly accurate. But it is very difficult to get traditional biometric data from a distance and without personal cooperation. Soft biometrics, although featuring less accuracy, can be used much more freely though. Recently, many researchers have been made on human identification using soft biometrics data collected from a distance. In this paper, we use both traditional and soft biometrics for human identification and propose a framework for solving such problems as lighting, occlusion, and shadowing.

  2. Specimen Identification Errors in Breast Biopsies: Age Matters. Report of Two Near-Miss Events and Review of the Literature.

    PubMed

    Tozbikian, Gary; Gemignani, Mary L; Brogi, Edi

    2017-09-01

    The consequences of patient identification errors due to specimen mislabeling can be deleterious. We describe two near-miss events involving mislabeled breast specimens from two patients who sought treatment at our institution. In both cases, microscopic review of the slides identified inconsistencies between the histologic findings and patient age, unveiling specimen identification errors. By correlating the clinical information with the microscopic findings, we identified mistakes that had occurred at the time of specimen accessioning at the original laboratories. In both cases, thanks to a timely reassignment of the specimens, the patients suffered no harm. These cases highlight the importance of routine clinical and pathologic correlation as a critical component of quality assurance and patient safety. A review of possible specimen identification errors in the anatomic pathology setting is presented. © 2017 Wiley Periodicals, Inc.

  3. Discovery of phosphoinositide 3-kinases (PI3K) p110β isoform inhibitor 4-[2-hydroxyethyl(1-naphthylmethyl)amino]-6-[(2S)-2-methylmorpholin-4-yl]-1H-pyrimidin-2-one, an effective antithrombotic agent without associated bleeding and insulin resistance.

    PubMed

    Giordanetto, Fabrizio; Wållberg, Andreas; Ghosal, Saswati; Iliefski, Tommy; Cassel, Johan; Yuan, Zhong-Qing; von Wachenfeldt, Henrik; Andersen, Søren M; Inghardt, Tord; Tunek, Anders; Nylander, Sven

    2012-11-01

    Structure-based evolution of the original fragment leads resulted in the identification of 4-[2-hydroxyethyl(1-naphthylmethyl)amino]-6-[(2S)-2-methylmorpholin-4-yl]-1H-pyrimidin-2-one, (S)-21, a potent, selective phosphoinositide 3-kinases (PI3K) p110β isoform inhibitor with favourable in vivo antiplatelet effect. Despite its antiplatelet action, (S)-21 did not significantly increase bleeding time in dogs. Additionally, due to its enhanced selectivity over p110α, (S)-21 did not induce any insulin resistance in rats. Copyright © 2012 Elsevier Ltd. All rights reserved.

  4. Renormalization group flow of the Higgs potential.

    PubMed

    Gies, Holger; Sondenheimer, René

    2018-03-06

    We summarize results for local and global properties of the effective potential for the Higgs boson obtained from the functional renormalization group, which allows one to describe the effective potential as a function of both scalar field amplitude and renormalization group scale. This sheds light onto the limitations of standard estimates which rely on the identification of the two scales and helps in clarifying the origin of a possible property of meta-stability of the Higgs potential. We demonstrate that the inclusion of higher-dimensional operators induced by an underlying theory at a high scale (GUT or Planck scale) can relax the conventional lower bound on the Higgs mass derived from the criterion of absolute stability.This article is part of the Theo Murphy meeting issue 'Higgs cosmology'. © 2018 The Author(s).

  5. Identification of Campylobacter with hyperspectral microscope imaging

    USDA-ARS?s Scientific Manuscript database

    Campylobacter is the major group of bacteria responsible for foodborne gastroenteritis in humans worldwide. Most of the cases of campylobacteriosis have revealed their poultry origins so that various detection methods have been employed from the farm to processing levels. Especially Campylobacter ...

  6. 40 CFR 52.1490 - Original identification of plan.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... measures. (ii) A modeling analysis indicating 1982 attainment. (iii) Documentation of the modeling analysis... agencies, (ii) Additional supporting documentation for the 1982 attainment modeling analysis which included... factors for the model. (iii) A revised 1982 attainment modeling analysis and supporting documentation...

  7. 40 CFR 52.1490 - Original identification of plan.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... measures. (ii) A modeling analysis indicating 1982 attainment. (iii) Documentation of the modeling analysis... agencies, (ii) Additional supporting documentation for the 1982 attainment modeling analysis which included... factors for the model. (iii) A revised 1982 attainment modeling analysis and supporting documentation...

  8. 40 CFR 52.1490 - Original identification of plan.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... measures. (ii) A modeling analysis indicating 1982 attainment. (iii) Documentation of the modeling analysis... agencies, (ii) Additional supporting documentation for the 1982 attainment modeling analysis which included... factors for the model. (iii) A revised 1982 attainment modeling analysis and supporting documentation...

  9. 28 CFR 42.402 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Pacific Islands. This area includes, for example, China, Japan, Korea, the Philippine Islands, and Samoa... North America, and who maintain cultural identification through tribal affiliation or community... Europe, North Africa, or the Middle East. Additional sub-categories based on national origin or primary...

  10. 28 CFR 42.402 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Pacific Islands. This area includes, for example, China, Japan, Korea, the Philippine Islands, and Samoa... North America, and who maintain cultural identification through tribal affiliation or community... Europe, North Africa, or the Middle East. Additional sub-categories based on national origin or primary...

  11. 28 CFR 42.402 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Pacific Islands. This area includes, for example, China, Japan, Korea, the Philippine Islands, and Samoa... North America, and who maintain cultural identification through tribal affiliation or community... Europe, North Africa, or the Middle East. Additional sub-categories based on national origin or primary...

  12. 28 CFR 42.402 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Pacific Islands. This area includes, for example, China, Japan, Korea, the Philippine Islands, and Samoa... North America, and who maintain cultural identification through tribal affiliation or community... Europe, North Africa, or the Middle East. Additional sub-categories based on national origin or primary...

  13. Talent Identification and Development in Male Football: A Systematic Review.

    PubMed

    Sarmento, Hugo; Anguera, M Teresa; Pereira, Antonino; Araújo, Duarte

    2018-04-01

    Expertise has been extensively studied in several sports over recent years. The specificities of how excellence is achieved in Association Football, a sport practiced worldwide, are being repeatedly investigated by many researchers through a variety of approaches and scientific disciplines. The aim of this review was to identify and synthesise the most significant literature addressing talent identification and development in football. We identified the most frequently researched topics and characterised their methodologies. A systematic review of Web of Science™ Core Collection and Scopus databases was performed according to PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-analyses) guidelines. The following keywords were used: "football" and "soccer". Each word was associated with the terms "talent", "expert*", "elite", "elite athlete", "identification", "career transition" or "career progression". The selection was for the original articles in English containing relevant data about talent development/identification on male footballers. The search returned 2944 records. After screening against set criteria, a total of 70 manuscripts were fully reviewed. The quality of the evidence reviewed was generally excellent. The most common topics of analysis were (1) task constraints: (a) specificity and volume of practice; (2) performers' constraints: (a) psychological factors; (b) technical and tactical skills; (c) anthropometric and physiological factors; (3) environmental constraints: (a) relative age effect; (b) socio-cultural influences; and (4) multidimensional analysis. Results indicate that the most successful players present technical, tactical, anthropometric, physiological and psychological advantages that change non-linearly with age, maturational status and playing positions. These findings should be carefully considered by those involved in the identification and development of football players. This review highlights the need for coaches and scouts to consider the players' technical and tactical skills combined with their anthropometric and physiological characteristics scaled to age. Moreover, research addressing the psychological and environmental aspects that influence talent identification and development in football is currently lacking. The limitations detected in the reviewed studies suggest that future research should include the best performers and adopt a longitudinal and multidimensional perspective.

  14. Classifying Vessels Operating in the South China Sea by Origin with the Automatic Identification System

    DTIC Science & Technology

    2018-03-01

    operating vessel’s origin, by country and geographical region. Two types of models are built. The first model captures the naturally dependent nature of AIS... dependency between AIS signals in order to characterize maritime patterns of behavior by country and region. With relative accuracy, both types of...of models are built. The first model captures the naturally dependent nature of AIS signals and serves as a proof of concept for how well a global

  15. Identification of Candidates for BACT Determinations

    EPA Pesticide Factsheets

    This document may be of assistance in applying the New Source Review (NSR) air permitting regulations including the Prevention of Significant Deterioration (PSD) requirements. This document is part of the NSR Policy and Guidance Database. Some documents in the database are a scanned or retyped version of a paper photocopy of the original. Although we have taken considerable effort to quality assure the documents, some may contain typographical errors. Contact the office that issued the document if you need a copy of the original.

  16. Identification and Characterization of Intercritical Heat-Affected Zone in As-Welded Grade 91 Weldment

    NASA Astrophysics Data System (ADS)

    Wang, Yiyu; Kannan, Rangasayee; Li, Leijun

    2016-12-01

    A metallurgical method is proposed for locating the intercritical heat-affected zone in the as-welded Grade 91 steel. New austenitic grains, preferentially formed along the original prior austenite grain boundaries, are characterized to contain finer M23C6 carbides and higher strain levels than the original prior austenite grains. Kurdjumov-Sachs Group 1 variant pairs, with a low misorientation of 7 deg within a martensitic block, are identified as the dominant variants in the new PAGs.

  17. Evaluation of different derivatisation approaches for gas chromatographic-mass spectrometric analysis of carbohydrates in complex matrices of biological and synthetic origin.

    PubMed

    Becker, M; Zweckmair, T; Forneck, A; Rosenau, T; Potthast, A; Liebner, F

    2013-03-15

    Gas chromatographic analysis of complex carbohydrate mixtures requires highly effective and reliable derivatisation strategies for successful separation, identification, and quantitation of all constituents. Different single-step (per-trimethylsilylation, isopropylidenation) and two-step approaches (ethoximation-trimethylsilylation, ethoximation-trifluoroacetylation, benzoximation-trimethylsilylation, benzoximation-trifluoroacetylation) have been comprehensively studied with regard to chromatographic characteristics, informational value of mass spectra, ease of peak assignment, robustness toward matrix effects, and quantitation using a set of reference compounds that comprise eight monosaccharides (C(5)-C(6)), glycolaldehyde, and dihydroxyacetone. It has been shown that isopropylidenation and the two oximation-trifluoroacetylation approaches are least suitable for complex carbohydrate matrices. Whereas the former is limited to compounds that contain vicinal dihydroxy moieties in cis configuration, the latter two methods are sensitive to traces of trifluoroacetic acid which strongly supports decomposition of ketohexoses. It has been demonstrated for two "real" carbohydrate-rich matrices of biological and synthetic origin, respectively, that two-step ethoximation-trimethylsilylation is superior to other approaches due to the low number of peaks obtained per carbohydrate, good peak separation performance, structural information of mass spectra, low limits of detection and quantitation, minor relative standard deviations, and low sensitivity toward matrix effects. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Applications of Fault Detection in Vibrating Structures

    NASA Technical Reports Server (NTRS)

    Eure, Kenneth W.; Hogge, Edward; Quach, Cuong C.; Vazquez, Sixto L.; Russell, Andrew; Hill, Boyd L.

    2012-01-01

    Structural fault detection and identification remains an area of active research. Solutions to fault detection and identification may be based on subtle changes in the time series history of vibration signals originating from various sensor locations throughout the structure. The purpose of this paper is to document the application of vibration based fault detection methods applied to several structures. Overall, this paper demonstrates the utility of vibration based methods for fault detection in a controlled laboratory setting and limitations of applying the same methods to a similar structure during flight on an experimental subscale aircraft.

  19. Heuristics to Evaluate Interactive Systems for Children with Autism Spectrum Disorder (ASD)

    PubMed Central

    Khowaja, Kamran; Salim, Siti Salwah

    2015-01-01

    In this paper, we adapted and expanded a set of guidelines, also known as heuristics, to evaluate the usability of software to now be appropriate for software aimed at children with autism spectrum disorder (ASD). We started from the heuristics developed by Nielsen in 1990 and developed a modified set of 15 heuristics. The first 5 heuristics of this set are the same as those of the original Nielsen set, the next 5 heuristics are improved versions of Nielsen's, whereas the last 5 heuristics are new. We present two evaluation studies of our new heuristics. In the first, two groups compared Nielsen’s set with the modified set of heuristics, with each group evaluating two interactive systems. The Nielsen’s heuristics were assigned to the control group while the experimental group was given the modified set of heuristics, and a statistical analysis was conducted to determine the effectiveness of the modified set, the contribution of 5 new heuristics and the impact of 5 improved heuristics. The results show that the modified set is significantly more effective than the original, and we found a significant difference between the five improved heuristics and their corresponding heuristics in the original set. The five new heuristics are effective in problem identification using the modified set. The second study was conducted using a system which was developed to ascertain if the modified set was effective at identifying usability problems that could be fixed before the release of software. The post-study analysis revealed that the majority of the usability problems identified by the experts were fixed in the updated version of the system. PMID:26196385

  20. A new qualitative acoustic emission parameter based on Shannon's entropy for damage monitoring

    NASA Astrophysics Data System (ADS)

    Chai, Mengyu; Zhang, Zaoxiao; Duan, Quan

    2018-02-01

    An important objective of acoustic emission (AE) non-destructive monitoring is to accurately identify approaching critical damage and to avoid premature failure by means of the evolutions of AE parameters. One major drawback of most parameters such as count and rise time is that they are strongly dependent on the threshold and other settings employed in AE data acquisition system. This may hinder the correct reflection of original waveform generated from AE sources and consequently bring difficulty for the accurate identification of the critical damage and early failure. In this investigation, a new qualitative AE parameter based on Shannon's entropy, i.e. AE entropy is proposed for damage monitoring. Since it derives from the uncertainty of amplitude distribution of each AE waveform, it is independent of the threshold and other time-driven parameters and can characterize the original micro-structural deformations. Fatigue crack growth test on CrMoV steel and three point bending test on a ductile material are conducted to validate the feasibility and effectiveness of the proposed parameter. The results show that the new parameter, compared to AE amplitude, is more effective in discriminating the different damage stages and identifying the critical damage.

  1. Unmasking Upstream Gene Expression Regulators with miRNA-corrected mRNA Data

    PubMed Central

    Bollmann, Stephanie; Bu, Dengpan; Wang, Jiaqi; Bionaz, Massimo

    2015-01-01

    Expressed micro-RNA (miRNA) affects messenger RNA (mRNA) abundance, hindering the accuracy of upstream regulator analysis. Our objective was to provide an algorithm to correct such bias. Large mRNA and miRNA analyses were performed on RNA extracted from bovine liver and mammary tissue. Using four levels of target scores from TargetScan (all miRNA:mRNA target gene pairs or only the top 25%, 50%, or 75%). Using four levels of target scores from TargetScan (all miRNA:mRNA target gene pairs or only the top 25%, 50%, or 75%) and four levels of the magnitude of miRNA effect (ME) on mRNA expression (30%, 50%, 75%, and 83% mRNA reduction), we generated 17 different datasets (including the original dataset). For each dataset, we performed upstream regulator analysis using two bioinformatics tools. We detected an increased effect on the upstream regulator analysis with larger miRNA:mRNA pair bins and higher ME. The miRNA correction allowed identification of several upstream regulators not present in the analysis of the original dataset. Thus, the proposed algorithm improved the prediction of upstream regulators. PMID:27279737

  2. Towards the automated identification of Chrysomya blow flies from wing images.

    PubMed

    Macleod, N; Hall, M J R; Wardhana, A H

    2018-04-15

    The Old World screwworm fly (OWSF), Chrysomya bezziana (Diptera: Calliphoridae), is an important agent of traumatic myiasis and, as such, a major human and animal health problem. In the implementation of OWSF control operations, it is important to determine the geographical origins of such disease-causing species in order to establish whether they derive from endemic or invading populations. Gross morphological and molecular studies have demonstrated the existence of two distinct lineages of this species, one African and the other Asian. Wing morphometry is known to be of substantial assistance in identifying the geographical origin of individuals because it provides diagnostic markers that complement molecular diagnostics. However, placement of the landmarks used in traditional geometric morphometric analysis can be time-consuming and subject to error caused by operator subjectivity. Here we report results of an image-based approach to geometric morphometric analysis for delivering wing-based identifications. Our results indicate that this approach can produce identifications that are practically indistinguishable from more traditional landmark-based results. In addition, we demonstrate that the direct analysis of digital wing images can be used to discriminate between three Chrysomya species of veterinary and forensic importance and between C. bezziana genders. © 2018 The Trustees of the Natural History Museum, London. Medical and Veterinary Entomology © 2018 Royal Entomological Society.

  3. Use of Dual Frequency Identification Sonar to Determine Adult Chinook Salmon (Oncorhynchus tshawytscha) Escapement in the Secesh River, Idaho ; Annual Report, January 2008 – December 2008.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kucera, Paul A.

    2009-06-26

    Chinook salmon in the Snake River basin were listed as threatened under the Endangered Species Act in 1992 (NMFS 1992). The Secesh River represents the only stream in the Snake River basin where natural origin (wild) salmon escapement monitoring occurs at the population level, absent a supplementation program. As such the Secesh River has been identified as a long term salmon escapement and productivity monitoring site by the Nez Perce Tribe Department of Fisheries Resources Management. Salmon managers will use this data for effective population management and evaluation of the effect of conservation actions on a natural origin salmon population.more » The Secesh River also acts as a reference stream for supplementation program comparison. Dual frequency identification sonar (DIDSON) was used to determine adult spring and summer Chinook salmon escapement in the Secesh River in 2008. DIDSON technology was selected because it provided a non-invasive method for escapement monitoring that avoided listed species trapping and handling incidental mortality, and fish impedance related concerns. The DIDSON monitoring site was operated continuously from June 13 to September 14. The first salmon passage was observed on July 3. DIDSON site total estimated salmon escapement, natural and hatchery fish, was 888 fish {+-} 65 fish (95% confidence interval). Coefficient of variation associated with the escapement estimate was 3.7%. The DIDSON unit was operational 98.1% of the salmon migration period. Adult salmon migration timing in the Secesh River occurred over 74 days from July 3 to September 14, with 5,262 total fish passages observed. The spawning migration had 10%, median, and 90% passage dates of July 8, July 16, and August 12, respectively. The maximum number of net upstream migrating salmon was above the DIDSON monitoring site on August 27. Validation monitoring of DIDSON target counts with underwater optical cameras occurred for species identification. A total of 860 optical camera identified salmon passage observations were identical to DIDSON target counts. However, optical cameras identified eight jack salmon (3 upstream, 5 downstream) less than 55 cm in length that DIDSON did not count as salmon because of the length criteria employed ({ge} 55 cm). Precision of the DIDSON technology was evaluated by comparing estimated net upstream salmon escapement and associated 95% confidence intervals between two DIDSON sonar units operated over a five day period. The DIDSON 1 salmon escapement was 145.7 fish ({+-} 2.3), and the DIDSON 2 escapement estimate was 150.5 fish ({+-} 5). The overlap in the 95% confidence intervals suggested that the two escapement estimates were not significantly different from each other. Known length salmon carcass trials were conducted in 2008 to examine the accuracy of manually measured lengths, obtained using DIDSON software, on high frequency files at a 5 m window length. Linear regression demonstrated a highly significant relationship between known lengths and manually measured salmon carcass lengths (p < 0.0001). A positive bias in manual length measurement of 6.8% to 8% existed among the two observers in the analysis. Total Secesh River salmon escapement (natural origin and hatchery) in 2008 was 912 fish. Natural origin salmon escapement in the entire Secesh River drainage was 847 fish. The estimated natural origin spawner abundance was 836 fish. Salmon spawner abundance in 2008 increased by three fold compared to 2007 abundance levels. The 10 year geometric mean natural origin spawner abundance was 538 salmon and was below the recommended viable population threshold level established by the ICTRT (2007). One additional Snake River basin salmon population was assessed for comparison of natural origin salmon spawner abundance. The Johnson Creek/EFSF Salmon River population had a 10 year geometric mean natural origin spawner abundance of 254 salmon. Salmon spawner abundance levels in both streams were below viable population thresholds. DIDSON technology has been used in the Secesh River to determine salmon escapement over the past five years. The results suggest that DIDSON technology is reliable and can be used to generate accurate and precise estimates of salmon escapement if appropriate methods are used.« less

  4. Mathematical Model of FLIR Performance

    DTIC Science & Technology

    1972-10-19

    two pairs of warships, the cruisers Baltimore and Sverdlov and the destroyers Forrest Sherman and Kotlin . In these cases, the original scale was 150...Johnson’s criterion for identification . To illustrate, if one examines the block silhouettes of the Kotlin and Forrest Sherman classes of

  5. Human fecal source identification with real-time quantitative PCR

    EPA Science Inventory

    Waterborne diseases represent a significant public health risk worldwide, and can originate from contact with water contaminated with human fecal material. We describe a real-time quantitative PCR (qPCR) method that targets a Bacteroides dori human-associated genetic marker for...

  6. 40 CFR 52.1974 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... air pollution control rules for Clackamas, Columbia, Multnomah and Washington Counties and certification of the dissolution of regulations for the Columbia-Willamette Air Pollution Authority submitted on...), of the Lane Regional Air Pollution Authority Rules and Regulations, submitted November 18, 1975 by...

  7. IDENTIFICATION OF SOURCES OF FECAL POLLUTION IN ENVIRONMENTAL WATERS

    EPA Science Inventory

    A number of Microbial Source Tracking (MST) methods are currently used to determine the origin of fecal pollution impacting environmental waters. MST is based on the assumption that given the appropriate method and indicator organism, the source of fecal microbial pollution can ...

  8. 49 CFR 599.200 - Registration of participating dealers.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... franchise agreement to sell new automobiles with an original equipment manufacturer of automobiles; (4) A...) Dealer's Federal Tax Identification Number (TIN) and OEM assigned dealer franchise number; (ii) Legal.... (e) Revocation of Dealer Registration. (1) Termination or Discontinuance of Franchise. (i) A dealer...

  9. 49 CFR 599.200 - Registration of participating dealers.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... franchise agreement to sell new automobiles with an original equipment manufacturer of automobiles; (4) A...) Dealer's Federal Tax Identification Number (TIN) and OEM assigned dealer franchise number; (ii) Legal.... (e) Revocation of Dealer Registration. (1) Termination or Discontinuance of Franchise. (i) A dealer...

  10. 49 CFR 599.200 - Registration of participating dealers.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... franchise agreement to sell new automobiles with an original equipment manufacturer of automobiles; (4) A...) Dealer's Federal Tax Identification Number (TIN) and OEM assigned dealer franchise number; (ii) Legal.... (e) Revocation of Dealer Registration. (1) Termination or Discontinuance of Franchise. (i) A dealer...

  11. 49 CFR 599.200 - Registration of participating dealers.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... franchise agreement to sell new automobiles with an original equipment manufacturer of automobiles; (4) A...) Dealer's Federal Tax Identification Number (TIN) and OEM assigned dealer franchise number; (ii) Legal.... (e) Revocation of Dealer Registration. (1) Termination or Discontinuance of Franchise. (i) A dealer...

  12. 49 CFR 599.200 - Registration of participating dealers.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... franchise agreement to sell new automobiles with an original equipment manufacturer of automobiles; (4) A...) Dealer's Federal Tax Identification Number (TIN) and OEM assigned dealer franchise number; (ii) Legal.... (e) Revocation of Dealer Registration. (1) Termination or Discontinuance of Franchise. (i) A dealer...

  13. 40 CFR 52.515 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Natural Resources and Environmental Control. (19) The Plan revision entitled “Revisions to the..., Cylinder wipe, Emission unit, Federally enforceable, Flexography, Fugitive emission, Gas services, Gas..., Freeboard ratio, Mayor, Vehicular fuel tank. Abbreviations: (Degree), VOC, “%”. (ii) Additional material. (A...

  14. 44 CFR 65.7 - Floodway revisions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... HOMELAND SECURITY INSURANCE AND HAZARD MITIGATION National Flood Insurance Program IDENTIFICATION AND... described below: (i) The floodway analysis must be performed using the hydraulic computer model used to... output data from the original and modified computer models must be submitted. (5) Delineation of the...

  15. 44 CFR 65.7 - Floodway revisions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... HOMELAND SECURITY INSURANCE AND HAZARD MITIGATION National Flood Insurance Program IDENTIFICATION AND... described below: (i) The floodway analysis must be performed using the hydraulic computer model used to... output data from the original and modified computer models must be submitted. (5) Delineation of the...

  16. 44 CFR 65.7 - Floodway revisions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... HOMELAND SECURITY INSURANCE AND HAZARD MITIGATION National Flood Insurance Program IDENTIFICATION AND... described below: (i) The floodway analysis must be performed using the hydraulic computer model used to... output data from the original and modified computer models must be submitted. (5) Delineation of the...

  17. 44 CFR 65.7 - Floodway revisions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... HOMELAND SECURITY INSURANCE AND HAZARD MITIGATION National Flood Insurance Program IDENTIFICATION AND... described below: (i) The floodway analysis must be performed using the hydraulic computer model used to... output data from the original and modified computer models must be submitted. (5) Delineation of the...

  18. 44 CFR 65.7 - Floodway revisions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... HOMELAND SECURITY INSURANCE AND HAZARD MITIGATION National Flood Insurance Program IDENTIFICATION AND... described below: (i) The floodway analysis must be performed using the hydraulic computer model used to... output data from the original and modified computer models must be submitted. (5) Delineation of the...

  19. Historic American apple cultivars: Identification and availability

    USDA-ARS?s Scientific Manuscript database

    Apples have been important throughout the centuries in North America. Historic books, publications, and nursery catalogs were surveyed to identify apple cultivars that were propagated and grown in the United States prior to 1908. We collected synonym, introduction date, and original source country i...

  20. 40 CFR 52.1222 - Original Identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... episode criteria was forwarded on February 7, 1972. (Non-regulatory) (2) Information concerning... Minneapolis-St. Paul Intrastate Air Quality Control Region. (7) Information concerning the transportation... schedules were submitted on June 28, 1973, by the Minnesota Pollution Control Agency. (9) Information...

  1. 40 CFR 52.1222 - Original Identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... episode criteria was forwarded on February 7, 1972. (Non-regulatory) (2) Information concerning... Minneapolis-St. Paul Intrastate Air Quality Control Region. (7) Information concerning the transportation... schedules were submitted on June 28, 1973, by the Minnesota Pollution Control Agency. (9) Information...

  2. 40 CFR 52.1222 - Original Identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... episode criteria was forwarded on February 7, 1972. (Non-regulatory) (2) Information concerning... Minneapolis-St. Paul Intrastate Air Quality Control Region. (7) Information concerning the transportation... schedules were submitted on June 28, 1973, by the Minnesota Pollution Control Agency. (9) Information...

  3. 40 CFR 52.1222 - Original Identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... episode criteria was forwarded on February 7, 1972. (Non-regulatory) (2) Information concerning... Minneapolis-St. Paul Intrastate Air Quality Control Region. (7) Information concerning the transportation... schedules were submitted on June 28, 1973, by the Minnesota Pollution Control Agency. (9) Information...

  4. The Dyslexia Simulation: Impact and Implications

    ERIC Educational Resources Information Center

    Wadlington, Elizabeth; Elliot, Cynthia; Kirylo, James

    2008-01-01

    Many students with reading difficulties have a specific learning disability called dyslexia, which is neurobiological in origin and characterized by problems with spelling, decoding, and accurate/fluent word identification, negatively impacting vocabulary growth and comprehension. Consequently, the role of the insightful teacher is critical in…

  5. Origin Replication Complex Binding, Nucleosome Depletion Patterns, and a Primary Sequence Motif Can Predict Origins of Replication in a Genome with Epigenetic Centromeres

    PubMed Central

    Tsai, Hung-Ji; Baller, Joshua A.; Liachko, Ivan; Koren, Amnon; Burrack, Laura S.; Hickman, Meleah A.; Thevandavakkam, Mathuravani A.; Rusche, Laura N.

    2014-01-01

    ABSTRACT Origins of DNA replication are key genetic elements, yet their identification remains elusive in most organisms. In previous work, we found that centromeres contain origins of replication (ORIs) that are determined epigenetically in the pathogenic yeast Candida albicans. In this study, we used origin recognition complex (ORC) binding and nucleosome occupancy patterns in Saccharomyces cerevisiae and Kluyveromyces lactis to train a machine learning algorithm to predict the position of active arm (noncentromeric) origins in the C. albicans genome. The model identified bona fide active origins as determined by the presence of replication intermediates on nondenaturing two-dimensional (2D) gels. Importantly, these origins function at their native chromosomal loci and also as autonomously replicating sequences (ARSs) on a linear plasmid. A “mini-ARS screen” identified at least one and often two ARS regions of ≥100 bp within each bona fide origin. Furthermore, a 15-bp AC-rich consensus motif was associated with the predicted origins and conferred autonomous replicating activity to the mini-ARSs. Thus, while centromeres and the origins associated with them are epigenetic, arm origins are dependent upon critical DNA features, such as a binding site for ORC and a propensity for nucleosome exclusion. PMID:25182328

  6. [DNA barcoding and its utility in commonly-used medicinal snakes].

    PubMed

    Huang, Yong; Zhang, Yue-yun; Zhao, Cheng-jian; Xu, Yong-li; Gu, Ying-le; Huang, Wen-qi; Lin, Kui; Li, Li

    2015-03-01

    Identification accuracy of traditional Chinese medicine is crucial for the traditional Chinese medicine research, production and application. DNA barcoding based on the mitochondrial gene coding for cytochrome c oxidase subunit I (COI), are more and more used for identification of traditional Chinese medicine. Using universal barcoding primers to sequence, we discussed the feasibility of DNA barcoding method for identification commonly-used medicinal snakes (a total of 109 samples belonging to 19 species 15 genera 6 families). The phylogenetic trees using Neighbor-joining were constructed. The results indicated that the mean content of G + C(46.5%) was lower than that of A + T (53.5%). As calculated by Kimera-2-parameter model, the mean intraspecies genetic distance of Trimeresurus albolabris, Ptyas dhumnades and Lycodon rufozonatus was greater than 2%. Further phylogenetic relationship results suggested that identification of one sample of T. albolabris was erroneous. The identification of some samples of P. dhumnades was also not correct, namely originally P. korros was identified as P. dhumnades. Factors influence on intraspecific genetic distance difference of L. rufozonatus need to be studied further. Therefore, DNA barcoding for identification of medicinal snakes is feasible, and greatly complements the morphological classification method. It is necessary to further study in identification of traditional Chinese medicine.

  7. Extended version of the "Sniffin' Sticks" identification test: test-retest reliability and validity.

    PubMed

    Sorokowska, A; Albrecht, E; Haehner, A; Hummel, T

    2015-03-30

    The extended, 32-item version of the Sniffin' Sticks identification test was developed in order to create a precise tool enabling repeated, longitudinal testing of individual olfactory subfunctions. Odors of the previous test version had to be changed for technical reasons, and the odor identification test needed re-investigation in terms of reliability, validity, and normative values. In our study we investigated olfactory abilities of a group of 100 patients with olfactory dysfunction and 100 controls. We reconfirmed the high test-retest reliability of the extended version of the Sniffin' Sticks identification test and high correlations between the new and the original part of this tool. In addition, we confirmed the validity of the test as it discriminated clearly between controls and patients with olfactory loss. The additional set of 16 odor identification sticks can be either included in the current olfactory test, thus creating a more detailed diagnosis tool, or it can be used separately, enabling to follow olfactory function over time. Additionally, the normative values presented in our paper might provide useful guidelines for interpretation of the extended identification test results. The revised version of the Sniffin' Sticks 32-item odor identification test is a reliable and valid tool for the assessment of olfactory function. Copyright © 2015 Elsevier B.V. All rights reserved.

  8. Adaptive error detection for HDR/PDR brachytherapy: Guidance for decision making during real-time in vivo point dosimetry

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kertzscher, Gustavo, E-mail: guke@dtu.dk; Andersen, Claus E., E-mail: clan@dtu.dk; Tanderup, Kari, E-mail: karitand@rm.dk

    Purpose: This study presents an adaptive error detection algorithm (AEDA) for real-timein vivo point dosimetry during high dose rate (HDR) or pulsed dose rate (PDR) brachytherapy (BT) where the error identification, in contrast to existing approaches, does not depend on an a priori reconstruction of the dosimeter position. Instead, the treatment is judged based on dose rate comparisons between measurements and calculations of the most viable dosimeter position provided by the AEDA in a data driven approach. As a result, the AEDA compensates for false error cases related to systematic effects of the dosimeter position reconstruction. Given its nearly exclusivemore » dependence on stable dosimeter positioning, the AEDA allows for a substantially simplified and time efficient real-time in vivo BT dosimetry implementation. Methods: In the event of a measured potential treatment error, the AEDA proposes the most viable dosimeter position out of alternatives to the original reconstruction by means of a data driven matching procedure between dose rate distributions. If measured dose rates do not differ significantly from the most viable alternative, the initial error indication may be attributed to a mispositioned or misreconstructed dosimeter (false error). However, if the error declaration persists, no viable dosimeter position can be found to explain the error, hence the discrepancy is more likely to originate from a misplaced or misreconstructed source applicator or from erroneously connected source guide tubes (true error). Results: The AEDA applied on twoin vivo dosimetry implementations for pulsed dose rate BT demonstrated that the AEDA correctly described effects responsible for initial error indications. The AEDA was able to correctly identify the major part of all permutations of simulated guide tube swap errors and simulated shifts of individual needles from the original reconstruction. Unidentified errors corresponded to scenarios where the dosimeter position was sufficiently symmetric with respect to error and no-error source position constellations. The AEDA was able to correctly identify all false errors represented by mispositioned dosimeters contrary to an error detection algorithm relying on the original reconstruction. Conclusions: The study demonstrates that the AEDA error identification during HDR/PDR BT relies on a stable dosimeter position rather than on an accurate dosimeter reconstruction, and the AEDA’s capacity to distinguish between true and false error scenarios. The study further shows that the AEDA can offer guidance in decision making in the event of potential errors detected with real-timein vivo point dosimetry.« less

  9. Identification of a nucleoside analog active against adenosine kinase–expressing plasma cell malignancies

    PubMed Central

    Sadek, Jouliana; Hernandez-Hopkins, Denise; Akar, Gunkut; Barelli, Peter J.; Sahai, Michelle A.; Zhou, Hufeng; Totonchy, Jennifer; Jayabalan, David; Niesvizky, Ruben; Guasparri, Ilaria; Liu, Yifang; Sei, Shizuko; Shoemaker, Robert H.; Elemento, Olivier; Kaye, Kenneth M.

    2017-01-01

    Primary effusion lymphoma (PEL) is a largely incurable malignancy of B cell origin with plasmacytic differentiation. Here, we report the identification of a highly effective inhibitor of PEL. This compound, 6-ethylthioinosine (6-ETI), is a nucleoside analog with toxicity to PEL in vitro and in vivo, but not to other lymphoma cell lines tested. We developed and performed resistome analysis, an unbiased approach based on RNA sequencing of resistant subclones, to discover the molecular mechanisms of sensitivity. We found different adenosine kinase–inactivating (ADK-inactivating) alterations in all resistant clones and determined that ADK is required to phosphorylate and activate 6-ETI. Further, we observed that 6-ETI induces ATP depletion and cell death accompanied by S phase arrest and DNA damage only in ADK-expressing cells. Immunohistochemistry for ADK served as a biomarker approach to identify 6-ETI–sensitive tumors, which we documented for other lymphoid malignancies with plasmacytic features. Notably, multiple myeloma (MM) expresses high levels of ADK, and 6-ETI was toxic to MM cell lines and primary specimens and had a robust antitumor effect in a disseminated MM mouse model. Several nucleoside analogs are effective in treating leukemias and T cell lymphomas, and 6-ETI may fill this niche for the treatment of PEL, plasmablastic lymphoma, MM, and other ADK-expressing cancers. PMID:28504647

  10. The Contribution of Buckwheat Genetic Resources to Health and Dietary Diversity

    PubMed Central

    Sytar, Oksana; Brestic, Marian; Zivcak, Marek; Tran, Lam-Son Phan

    2016-01-01

    Despite several reports on the beneficial effects of buckwheat in prevention of human diseases, little attention has been devoted to the variability of biochemical and physiological traits in different buckwheat genetic resources. This review describes the biochemical evaluation of buckwheat genetic resources and the identification of elite genotypes for plant breeding and exploitation. The various types of bioactive compounds present in different varieties provide basic background information needed for the efficient production of buckwheat foods with added value. In this review, we will provide an integrated view of the biochemistry of bioactive compounds of buckwheat plants of different origin, especially of fagopyrin, proteins and amino acids, as well as of other phenolic compounds including rutin and chlorogenic acid. In addition to the genetic background, the effect of different growth conditions is discussed. The health effects of fagopyrin, phenolic acids, specific proteins and rutin are also presented. PMID:27252586

  11. Uncertainty quantification and experimental design based on unsupervised machine learning identification of contaminant sources and groundwater types using hydrogeochemical data

    NASA Astrophysics Data System (ADS)

    Vesselinov, V. V.

    2017-12-01

    Identification of the original groundwater types present in geochemical mixtures observed in an aquifer is a challenging but very important task. Frequently, some of the groundwater types are related to different infiltration and/or contamination sources associated with various geochemical signatures and origins. The characterization of groundwater mixing processes typically requires solving complex inverse models representing groundwater flow and geochemical transport in the aquifer, where the inverse analysis accounts for available site data. Usually, the model is calibrated against the available data characterizing the spatial and temporal distribution of the observed geochemical species. Numerous geochemical constituents and processes may need to be simulated in these models which further complicates the analyses. As a result, these types of model analyses are typically extremely challenging. Here, we demonstrate a new contaminant source identification approach that performs decomposition of the observation mixtures based on Nonnegative Matrix Factorization (NMF) method for Blind Source Separation (BSS), coupled with a custom semi-supervised clustering algorithm. Our methodology, called NMFk, is capable of identifying (a) the number of groundwater types and (b) the original geochemical concentration of the contaminant sources from measured geochemical mixtures with unknown mixing ratios without any additional site information. We also demonstrate how NMFk can be extended to perform uncertainty quantification and experimental design related to real-world site characterization. The NMFk algorithm works with geochemical data represented in the form of concentrations, ratios (of two constituents; for example, isotope ratios), and delta notations (standard normalized stable isotope ratios). The NMFk algorithm has been extensively tested on synthetic datasets; NMFk analyses have been actively performed on real-world data collected at the Los Alamos National Laboratory (LANL) groundwater sites related to Chromium and RDX contamination.

  12. Comprehensive examination of conventional and innovative body fluid identification approaches and DNA profiling of laundered blood- and saliva-stained pieces of cloths.

    PubMed

    Kulstein, G; Wiegand, P

    2018-01-01

    Body fluids like blood and saliva are commonly encountered during investigations of high volume crimes like homicides. The identification of the cellular origin and the composition of the trace can link suspects or victims to a certain crime scene and provide a probative value for criminal investigations. To erase all traces from the crime scene, perpetrators often wash away their traces. Characteristically, items that show exposed stains like blood are commonly cleaned or laundered to free them from potential visible leftovers. Mostly, investigators do not delegate the DNA analysis of laundered items. However, some studies have already revealed that items can still be used for DNA analysis even after they have been laundered. Nonetheless, a systematical evaluation of laundered blood and saliva traces that provides a comparison of different established and newly developed methods for body fluid identification (BFI) is still missing. Herein, we present the results of a comprehensive study of laundered blood- and saliva-stained pieces of cloths that were applied to a broad range of methods for BFI including conventional approaches as well as molecular mRNA profiling. The study included the evaluation of cellular origin as well as DNA profiling of blood- and saliva-stained (synthetic fiber and cotton) pieces of cloths, which have been washed at various washing temperatures for one or multiple times. Our experiments demonstrate that, while STR profiling seems to be sufficiently sensitive for the individualization of laundered items, there is a lack of approaches for BFI with the same sensitivity and specificity allowing to characterize the cellular origin of challenging, particularly laundered, blood and saliva samples.

  13. Cryptoblemes: A New Discovery with Major Economic Implications and Profound Changes to the Geologic Paradigm

    NASA Technical Reports Server (NTRS)

    Windolph, J., Jr.; Sutton, J.

    1997-01-01

    Cryptoblemes are subtle impact shock signatures imprinted by cosmic debris on the crustal surfaces of lunar planetary bodes. These signatures constitute a complex cumulative overprinting of topographic, structural geophysical, and tectonic patterns that have a conspicuous radial centric multiringed symmetry. The geometry and distribution of cryptoblemes on Earth is comparable to the size and density of impact features on lunar planetary surfaces. Analysis of satellite imagery, sea-floor sonar, side-looking radar and aerial photographs of specific sites reveals new criteria for the identification and confirmation of impact-shock signatures. These criteria include joint and foliation patterns with asbestiform minerals, ribbon-quartz, spheroidal weathering, domal exfoliation, pencil shale, and shock spheres, which may originate from hydrocavitation of water-saturated sedimentary rocks. Cryptoblemes may also be associated with breccia pipes, sinkholes, buttes, mesas, and bogs, high-Rn anomalies, nodular concentrations, and earthquake epicenters. Major implications of cryptobleme identification include exploratory targeting of hydrocarbon and mineral deposits and the explanation of their origins. Analysis of known mineral deposits, structural traps and sedimentary basins show a direct correlation with cryptobleme patterns. Significant geologic paradigm shifts related to cryptoblemes include mountain building processes, structural orogenies, induced volcanism, earthquake origins, hydrocarbon diagenesis, formation mineral deposits, continental rifting, and plate movements, magnetic overprinting and local regional, and global geologic extinction and speciation patterns. Two figures provide a comparison between a multiring impact overprint in water and multiring cryptobleme in the U.S. basin range. (Additional information is contained in the original document).

  14. Quantitative and Discriminative Evaluation of Contents of Phenolic and Flavonoid and Antioxidant Competence for Chinese Honeys from Different Botanical Origins.

    PubMed

    Shen, Shi; Wang, Jingbo; Zhuo, Qin; Chen, Xi; Liu, Tingting; Zhang, Shuang-Qing

    2018-05-08

    Phenolics and flavonoids in honey are considered as the main phytonutrients which not only act as natural antioxidants, but can also be used as floral markers for honey identification. In this study, the chemical profiles of phenolics and flavonoids, antioxidant competences including total phenolic content, DPPH and ABTS assays and discrimination using chemometric analysis of various Chinese monofloral honeys from six botanical origins (acacia, Vitex , linden, rapeseed, Astragalus and Codonopsis ) were examined. A reproducible and sensitive ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) method was optimized and validated for the simultaneous determination of 38 phenolics, flavonoids and abscisic acid in honey. Formononetin, ononin, calycosin and calycosin-7- O -β-d-glucoside were identified and quantified in honeys for the first time. Principal component analysis (PCA) showed obvious differences among the honey samples in three-dimensional space accounting for 72.63% of the total variance. Hierarchical cluster analysis (HCA) also revealed that the botanical origins of honey samples correlated with their phenolic and flavonoid contents. Partial least squares-discriminant analysis (PLS-DA) classification was performed to derive a model with high prediction ability. Orthogonal partial least squares-discriminant analysis (OPLS-DA) model was employed to identify markers specific to a particular honey type. The results indicated that Chinese honeys contained various and discriminative phenolics and flavonoids, as well as antioxidant competence from different botanical origins, which was an alternative approach to honey identification and nutritional evaluation.

  15. Comparative analysis of quality parameters of Italian extra virgin olive oils according to their region of origin

    NASA Astrophysics Data System (ADS)

    Mignani, Anna Grazia; García-Allende, Pilar Beatriz; Ciaccheri, Leonardo; Conde, Olga M.; Cimato, Antonio; Attilio, Cristina; Tura, Debora

    2008-04-01

    Italian extra virgin olive oils from four regions covering different latitudes of the country were considered. They were analyzed by means of absorption spectroscopy in the wide 200-2800 nm spectral range, and multivariate data processing was applied. These spectra were virtually a signature identification from which to extract information on the region of origin and on the most important quality indicators. A classification map was created which was able to group the 80 oils on the basis of their region of origin. Furthermore, a model for the prediction of quality parameters such as oleic acidity, peroxide number, K232, K270 and Delta K, was developed.

  16. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry: a new possibility for the identification and typing of anaerobic bacteria.

    PubMed

    Nagy, Elizabeth

    2014-01-01

    Anaerobic bacteria predominate in the normal flora of humans and are important, often life-threatening pathogens in mixed infections originating from the indigenous microbiota. The isolation and identification of anaerobes by phenotypic and DNA-based molecular methods at a species level is time-consuming and laborious. Following the successful adaptation of the matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the routine laboratory identification of bacteria, the extensive development of a database has been initiated to use this method for the identification of anaerobic bacteria. Not only frequently isolated anaerobic species, but also newly recognized and taxonomically rearranged genera and species can be identified using direct smear samples or whole-cell protein extraction, and even phylogenetically closely related species can be identified correctly by means of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Typing of anaerobic bacteria on a subspecies level, determination of antibiotic resistance and direct identification of blood culture isolates will revolutionize anaerobe bacteriology in the near future.

  17. Isolation and molecular identification of Sunshine virus, a novel paramyxovirus found in Australian snakes.

    PubMed

    Hyndman, Timothy H; Marschang, Rachel E; Wellehan, James F X; Nicholls, Philip K

    2012-10-01

    This paper describes the isolation and molecular identification of a novel paramyxovirus found during an investigation of an outbreak of neurorespiratory disease in a collection of Australian pythons. Using Illumina® high-throughput sequencing, a 17,187 nucleotide sequence was assembled from RNA extracts from infected viper heart cells (VH2) displaying widespread cytopathic effects in the form of multinucleate giant cells. The sequence appears to contain all the coding regions of the genome, including the following predicted paramyxoviral open reading frames (ORFs): 3'--Nucleocapsid (N)--putative Phosphoprotein (P)--Matrix (M)--Fusion (F)--putative attachment protein--Polymerase (L)--5'. There is also a 540 nucleotide ORF between the N and putative P genes that may be an additional coding region. Phylogenetic analyses of the complete N, M, F and L genes support the clustering of this virus within the family Paramyxoviridae but outside both of the current subfamilies: Paramyxovirinae and Pneumovirinae. We propose to name this new virus, Sunshine virus, after the geographic origin of the first isolate--the Sunshine Coast of Queensland, Australia. Copyright © 2012 Elsevier B.V. All rights reserved.

  18. Isolation and molecular identification of endophytic diazotrophs from seeds and stems of three cereal crops.

    PubMed

    Liu, Huawei; Zhang, Lei; Meng, Aihua; Zhang, Junbiao; Xie, Miaomiao; Qin, Yaohong; Faulk, Dylan Chase; Zhang, Baohong; Yang, Shushen; Qiu, Li

    2017-01-01

    Ten strains of endophytic diazotroph were isolated and identified from the plants collected from three different agricultural crop species, wheat, rice and maize, using the nitrogen-free selective isolation conditions. The nitrogen-fixing ability of endophytic diazotroph was verified by the nifH-PCR assay that showed positive nitrogen fixation ability. These identified strains were classified by 879F-RAPD and 16S rRNA sequence analysis. RAPD analyses revealed that the 10 strains were clustered into seven 879F-RAPD groups, suggesting a clonal origin. 16S rRNA sequencing analyses allowed the assignment of the 10 strains to known groups of nitrogen-fixing bacteria, including organisms from the genera Paenibacillus, Enterobacter, Klebsiella and Pantoea. These representative genus are not endophytic diazotrophs in the conventional sense. They may have obtained nitrogen fixation ability through lateral gene transfer, however, the evolutionary forces of lateral gene transfer are not well known. Molecular identification results from 16S rRNA analyses were also confirmed by morphological and biochemical data. The test strains SH6A and MZB showed positive effect on the growth of plants.

  19. Multi-level hot zone identification for pedestrian safety.

    PubMed

    Lee, Jaeyoung; Abdel-Aty, Mohamed; Choi, Keechoo; Huang, Helai

    2015-03-01

    According to the National Highway Traffic Safety Administration (NHTSA), while fatalities from traffic crashes have decreased, the proportion of pedestrian fatalities has steadily increased from 11% to 14% over the past decade. This study aims at identifying two zonal levels factors. The first is to identify hot zones at which pedestrian crashes occurs, while the second are zones where crash-involved pedestrians came from. Bayesian Poisson lognormal simultaneous equation spatial error model (BPLSESEM) was estimated and revealed significant factors for the two target variables. Then, PSIs (potential for safety improvements) were computed using the model. Subsequently, a novel hot zone identification method was suggested to combine both hot zones from where vulnerable pedestrians originated with hot zones where many pedestrian crashes occur. For the former zones, targeted safety education and awareness campaigns can be provided as countermeasures whereas area-wide engineering treatments and enforcement may be effective safety treatments for the latter ones. Thus, it is expected that practitioners are able to suggest appropriate safety treatments for pedestrian crashes using the method and results from this study. Copyright © 2015 Elsevier Ltd. All rights reserved.

  20. Identification and resolution of artifacts in the interpretation of imprinted gene expression

    PubMed Central

    Proudhon, Charlotte

    2010-01-01

    Genomic imprinting refers to genes that are epigenetically programmed in the germline to express exclusively or preferentially one allele in a parent-of-origin manner. Expression-based genome-wide screening for the identification of imprinted genes has failed to uncover a significant number of new imprinted genes, probably because of the high tissue- and developmental-stage specificity of imprinted gene expression. A very large number of technical and biological artifacts can also lead to the erroneous evidence of imprinted gene expression. In this article, we focus on three common sources of potential confounding effects: (i) random monoallelic expression in monoclonal cell populations, (ii) genetically determined monoallelic expression and (iii) contamination or infiltration of embryonic tissues with maternal material. This last situation specifically applies to genes that occur as maternally expressed in the placenta. Beside the use of reciprocal crosses that are instrumental to confirm the parental specificity of expression, we provide additional methods for the detection and elimination of these situations that can be misinterpreted as cases of imprinted expression. PMID:20829207

  1. Cultural Adaptation of the Portuguese Version of the “Sniffin’ Sticks” Smell Test: Reliability, Validity, and Normative Data

    PubMed Central

    Ribeiro, João Carlos; Simões, João; Silva, Filipe; Silva, Eduardo D.; Hummel, Cornelia; Hummel, Thomas; Paiva, António

    2016-01-01

    The cross-cultural adaptation and validation of the Sniffin`Sticks test for the Portuguese population is described. Over 270 people participated in four experiments. In Experiment 1, 67 participants rated the familiarity of presented odors and seven descriptors of the original test were adapted to a Portuguese context. In Experiment 2, the Portuguese version of Sniffin`Sticks test was administered to 203 healthy participants. Older age, male gender and active smoking status were confirmed as confounding factors. The third experiment showed the validity of the Portuguese version of Sniffin`Sticks test in discriminating healthy controls from patients with olfactory dysfunction. In Experiment 4, the test-retest reliability for both the composite score (r71 = 0.86) and the identification test (r71 = 0.62) was established (p<0.001). Normative data for the Portuguese version of Sniffin`Sticks test is provided, showing good validity and reliability and effectively distinguishing patients from healthy controls with high sensitivity and specificity. The Portuguese version of Sniffin`Sticks test identification test is a clinically suitable screening tool in routine outpatient Portuguese settings. PMID:26863023

  2. mirVAFC: A Web Server for Prioritizations of Pathogenic Sequence Variants from Exome Sequencing Data via Classifications.

    PubMed

    Li, Zhongshan; Liu, Zhenwei; Jiang, Yi; Chen, Denghui; Ran, Xia; Sun, Zhong Sheng; Wu, Jinyu

    2017-01-01

    Exome sequencing has been widely used to identify the genetic variants underlying human genetic disorders for clinical diagnoses, but the identification of pathogenic sequence variants among the huge amounts of benign ones is complicated and challenging. Here, we describe a new Web server named mirVAFC for pathogenic sequence variants prioritizations from clinical exome sequencing (CES) variant data of single individual or family. The mirVAFC is able to comprehensively annotate sequence variants, filter out most irrelevant variants using custom criteria, classify variants into different categories as for estimated pathogenicity, and lastly provide pathogenic variants prioritizations based on classifications and mutation effects. Case studies using different types of datasets for different diseases from publication and our in-house data have revealed that mirVAFC can efficiently identify the right pathogenic candidates as in original work in each case. Overall, the Web server mirVAFC is specifically developed for pathogenic sequence variant identifications from family-based CES variants using classification-based prioritizations. The mirVAFC Web server is freely accessible at https://www.wzgenomics.cn/mirVAFC/. © 2016 WILEY PERIODICALS, INC.

  3. Analytical specificity and sensitivity of a real-time polymerase chain reaction assay for identification of bovine mastitis pathogens.

    PubMed

    Koskinen, M T; Holopainen, J; Pyörälä, S; Bredbacka, P; Pitkälä, A; Barkema, H W; Bexiga, R; Roberson, J; Sølverød, L; Piccinini, R; Kelton, D; Lehmusto, H; Niskala, S; Salmikivi, L

    2009-03-01

    Intramammary infection (IMI), also known as mastitis, is the most frequently occurring and economically the most important infectious disease in dairy cattle. This study provides a validation of the analytical specificity and sensitivity of a real-time PCR-based assay that identifies 11 major pathogen species or species groups responsible for IMI, and a gene coding for staphylococcal beta-lactamase production (penicillin resistance). Altogether, 643 culture isolates originating from clinical bovine mastitis, human, and companion animal samples were analyzed using the assay. The isolates represented 83 different species, groups, or families, and originated from 6 countries in Europe and North America. The analytical specificity and sensitivity of the assay was 100% in bacterial and beta-lactamase identification across all isolates originating from bovine mastitis (n = 454). When considering the entire culture collection (including also the isolates originating from human and companion animal samples), 4 Streptococcus pyogenes, 1 Streptococcus salivarius, and 1 Streptococcus sanguis strain of human origin were identified as Streptococcus uberis, and 3 Shigella spp. strains were identified as Escherichia coli, decreasing specificity to 99% in Strep. uberis and to 99.5% in E. coli. These false-positive results were confirmed by sequencing of the 16S rRNA gene. Specificity and sensitivity remained at 100% for all other bacterial targets across the entire culture collection. In conclusion, the real-time PCR assay shows excellent analytical accuracy and holds much promise for use in routine bovine IMI testing programs. This study provides the basis for evaluating the assay's diagnostic performance against the conventional bacterial culture method in clinical field trials using mastitis milk samples.

  4. Bovine tuberculosis slaughter surveillance in the United States 2001–2010: assessment of its traceback investigation function

    PubMed Central

    2014-01-01

    Background The success of tracing cattle to the herd of origin after the detection and confirmation of bovine tuberculosis (TB) lesions in cattle at slaughter is a critical component of the national bovine TB eradication program in the United States (U.S.). The aims of this study were to 1) quantify the number of bovine TB cases identified at slaughter that were successfully traced to their herd of origin in the U.S. during 2001–2010, 2) quantify the number of successful traceback investigations that found additional TB infected animals in the herd of origin or epidemiologically linked herds, and 3) describe the forms of animal identification present on domestic bovine TB cases and their association with traceback success. Results We analyzed 2001–2010 data in which 371 granulomatous lesions were confirmed as bovine TB. From these 114 bovine TB cases, 78 adults (i.e. sexually intact bovines greater than two years of age), and 36 fed (i.e. less than or equal to two years of age) were classified as domestic cattle (U.S. originated). Of these adults and fed cases, 83% and 13% were successfully traced, respectively. Of these traceback investigations, 70% of adult cases and 50% of fed cases identified additional bovine TB infected animals in the herd of origin or an epidemiologically linked herd. We found that the presence of various forms of animal identification on domestic bovine TB cases at slaughter may facilitate successful traceback investigations; however, they do not guarantee it. Conclusions These results provide valuable information with regard to epidemiological traceback investigations and serve as a baseline to aid U.S. officials when assessing the impact of newly implemented strategies as part of the national bovine TB eradication in the U.S. PMID:25123050

  5. 7 CFR 1767.15 - General instructions.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... by such detailed information as will permit ready identification, analysis, and verification of all... utility's records shall be so kept as to permit ready analysis by prescribed accounts (by direct reference to sources of original entry to the extent practicable) and to permit preparation of financial and...

  6. 7 CFR 1767.15 - General instructions.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... by such detailed information as will permit ready identification, analysis, and verification of all... utility's records shall be so kept as to permit ready analysis by prescribed accounts (by direct reference to sources of original entry to the extent practicable) and to permit preparation of financial and...

  7. 7 CFR 1767.15 - General instructions.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... by such detailed information as will permit ready identification, analysis, and verification of all... utility's records shall be so kept as to permit ready analysis by prescribed accounts (by direct reference to sources of original entry to the extent practicable) and to permit preparation of financial and...

  8. 75 FR 7546 - Foreign Trade Regulations (FTR): Eliminate the Social Security Number (SSN) as an Identification...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-22

    ... for updating AES account information if a filer was originally registered with an SSN. Several... of current AES account information. However, if they are currently registered under an SSN, AESDirect filers can complete the [[Page 7548

  9. The Modification of Mars Fluvial Surfaces

    NASA Technical Reports Server (NTRS)

    Bourke, M. C.; Zimbelman, J. R.; Finnegan, D.; Banerdt, B.

    2001-01-01

    The identification of fluvial deposits on Mars is impaired by modifying geological processes. An analysis of surface patterns of superimposed dunes and channels in paleoflood environments in Washington State and Australia can yield information on buried surfaces. Additional information is contained in the original extended abstract.

  10. Communication by Design. A Public Relations Handbook.

    ERIC Educational Resources Information Center

    Illinois State Board of Education, Springfield. Dept. of Adult, Vocational and Technical Education.

    This handbook provides information and forms for conducting successful public relations activities for vocational education. Chapter 1 discusses the importance of planning. The research, consultation, objective, and plan design phases are covered. Chapter 2 is an original discourse on communications theory with identification of crucial elements…

  11. 40 CFR 52.939 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Performance for Existing Solvent Metal Cleaning Equipment. (7) Regulation 6.19 Standard of Performance for Existing Metal Furniture Surface Coating Operations. (8) Regulation 6.23 Standard of Performance for...) Regulation 6.31 Standard of Performance for Existing Miscellaneous Metal Parts and Products Surface Coating...

  12. 40 CFR 52.939 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Performance for Existing Solvent Metal Cleaning Equipment. (7) Regulation 6.19 Standard of Performance for Existing Metal Furniture Surface Coating Operations. (8) Regulation 6.23 Standard of Performance for...) Regulation 6.31 Standard of Performance for Existing Miscellaneous Metal Parts and Products Surface Coating...

  13. 40 CFR 52.939 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Performance for Existing Solvent Metal Cleaning Equipment. (7) Regulation 6.19 Standard of Performance for Existing Metal Furniture Surface Coating Operations. (8) Regulation 6.23 Standard of Performance for...) Regulation 6.31 Standard of Performance for Existing Miscellaneous Metal Parts and Products Surface Coating...

  14. 40 CFR 52.465 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... through XIV inclusive of the Delaware Regulations Governing Air Pollution, and Amendments to the Delaware... Plan, covering changes to the air pollution monitoring system; submitted on September 3, 1975 by the..., consisting of an amendment to Delaware Regulations Governing Air Pollution, Regulation XVII, establishing...

  15. 40 CFR 52.465 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... through XIV inclusive of the Delaware Regulations Governing Air Pollution, and Amendments to the Delaware... Plan, covering changes to the air pollution monitoring system; submitted on September 3, 1975 by the..., consisting of an amendment to Delaware Regulations Governing Air Pollution, Regulation XVII, establishing...

  16. 40 CFR 52.465 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... through XIV inclusive of the Delaware Regulations Governing Air Pollution, and Amendments to the Delaware... Plan, covering changes to the air pollution monitoring system; submitted on September 3, 1975 by the..., consisting of an amendment to Delaware Regulations Governing Air Pollution, Regulation XVII, establishing...

  17. Identifying the Gifted Child Humorist.

    ERIC Educational Resources Information Center

    Fern, Tami L.

    1991-01-01

    This study attempted to identify gifted child humorists among 1,204 children in grades 3-6. Final identification of 13 gifted child humorists was determined through application of such criteria as funniness, originality, and exemplary performance or product. The influence of intelligence, development, social factors, sex differences, family…

  18. 7 CFR 1485.16 - Reimbursement rules.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... design and production of packaging, labeling or origin identification, to be used during the activity... exceeds locally prevailing levels which the MAP participant shall document by a salary survey or other...) Market research; (17) Evaluations, if not required by CCC to ensure compliance with program requirements...

  19. 7 CFR 1485.16 - Reimbursement rules.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... design and production of packaging, labeling or origin identification, to be used during the activity... exceeds locally prevailing levels which the MAP participant shall document by a salary survey or other...) Market research; (17) Evaluations, if not required by CCC to ensure compliance with program requirements...

  20. Identification of a nucleopolyhedrovirus in winter moth populations from Massachusetts

    Treesearch

    John P. Burand; Anna Welch; Woojin Kim; Vince D' Amico; Joseph S. Elkinton

    2011-01-01

    The winter moth, Operophtera brumata, originally from Europe, has recently invaded eastern Massachusetts. This insect has caused widespread defoliation of many deciduous tree species and severely damaged a variety of crop plants in the infested area including apple, strawberry, and especially blueberry.

  1. Identification and evaluation of bioremediation potential of laccase isoforms produced by Cyathus bulleri on wheat bran.

    PubMed

    Vats, Arpita; Mishra, Saroj

    2018-02-15

    Multiplicity in laccases among lignin degrading fungal species is of interest as it confers the ability to degrade several types of lignocellulosics. The combination of laccases produced on such substrates could be beneficial for treatment of complex aromatics, including dyes. In this study, we report on production of high units (679.6Ug -1 substrate) of laccase on solid wheat bran (WB) by Cyathus bulleri. Laccase, purified from the culture filtrates of WB grown fungus, was effective for oxidation of veratryl alcohol, Reactive blue 21 and textile effluent without assistance of externally added mediators. De novo sequencing of the 'purified' laccase lead to identification of several peptides that originated from different laccase genes. Transcriptome analysis of the fungus, cultivated on WB, confirmed presence of 8 isozymes, that were re-amplified and sequenced from the cDNA prepared from WB grown fungus. The 8 isozymes were grouped into 3 classes, based on their sequence relationship with other basidiomycete laccases. The isoforms produced on WB decolorized (by ∼57%) and degraded textile effluent far more effectively, compared to laccase obtained from Basal salt cultivated fungus. The decolorization and degradation was also accompanied by more than 95% reduction in phytotoxicity. Copyright © 2017 Elsevier B.V. All rights reserved.

  2. Characterization of selected volatile organic compounds, polycyclic aromatic hydrocarbons and carbonyl compounds at a roadside monitoring station

    NASA Astrophysics Data System (ADS)

    Ho, K. F.; Lee, S. C.; Chiu, Gloria M. Y.

    Volatile organic compounds (VOCs), PAHs and carbonyl compounds are the major toxic components in Hong Kong. Emissions from motor vehicles have been one of the primary pollution sources in the metropolitan areas throughout Hong Kong for a long time. A 1-yr monitoring program for VOCs, PAHs and carbonyl compounds had been performed at a roadside urban station at Hong Kong Polytechnic University in order to determine the variations and correlations of each selected species (VOCs, PAHs and carbonyl compounds). This study is aimed to analyze toxic volatile organic compounds (benzene, toluene, ethylbenzene and xylene), two carbonyl compounds (formaldehyde, acetaldehyde), and selective polycyclic aromatic hydrocarbons. The monitoring program started from 16 April 1999 to 30 March 2000. Ambient VOC concentrations, many of which originate from the same sources as particulate PAHs and carbonyls compounds, show significant quantities of benzene, toluene and xylenes. Correlations and multivariate analysis of selected gaseous and particulate phase organic pollutants were performed. Source identification by principle component analysis and hierarchical cluster analysis allowed the identification of four sources (factors) for the roadside monitoring station. Factor 1 represents the effect of diesel vehicle exhaust. Factor 2 shows the contribution of aromatic compounds. Factor 3 explains photochemical products—formaldehyde and acetaldehyde. Factor 4 explains the effect of gasoline vehicle exhaust.

  3. A Rational Approach for the Identification of Non-Hydroxamate HDAC6-Selective Inhibitors

    NASA Astrophysics Data System (ADS)

    Goracci, Laura; Deschamps, Nathalie; Randazzo, Giuseppe Marco; Petit, Charlotte; Dos Santos Passos, Carolina; Carrupt, Pierre-Alain; Simões-Pires, Claudia; Nurisso, Alessandra

    2016-07-01

    The human histone deacetylase isoform 6 (HDAC6) has been demonstrated to play a major role in cell motility and aggresome formation, being interesting for the treatment of multiple tumour types and neurodegenerative conditions. Currently, most HDAC inhibitors in preclinical or clinical evaluations are non-selective inhibitors, characterised by a hydroxamate zinc-binding group (ZBG) showing off-target effects and mutagenicity. The identification of selective HDAC6 inhibitors with novel chemical properties has not been successful yet, also because of the absence of crystallographic information that makes the rational design of HDAC6 selective inhibitors difficult. Using HDAC inhibitory data retrieved from the ChEMBL database and ligand-based computational strategies, we identified 8 original new non-hydroxamate HDAC6 inhibitors from the SPECS database, with activity in the low μM range. The most potent and selective compound, bearing a hydrazide ZBG, was shown to increase tubulin acetylation in human cells. No effects on histone H4 acetylation were observed. To the best of our knowledge, this is the first report of an HDAC6 selective inhibitor bearing a hydrazide ZBG. Its capability to passively cross the blood-brain barrier (BBB), as observed through PAMPA assays, and its low cytotoxicity in vitro, suggested its potential for drug development.

  4. [FMEA applied to the radiotherapy patient care process].

    PubMed

    Meyrieux, C; Garcia, R; Pourel, N; Mège, A; Bodez, V

    2012-10-01

    Failure modes and effects analysis (FMEA), is a risk analysis method used at the Radiotherapy Department of Institute Sainte-Catherine as part of a strategy seeking to continuously improve the quality and security of treatments. The method comprises several steps: definition of main processes; for each of them, description for every step of prescription, treatment preparation, treatment application; identification of the possible risks, their consequences, their origins; research of existing safety elements which may avoid these risks; grading of risks to assign a criticality score resulting in a numerical organisation of the risks. Finally, the impact of proposed corrective actions was then estimated by a new grading round. For each process studied, a detailed map of the risks was obtained, facilitating the identification of priority actions to be undertaken. For example, we obtain five steps in patient treatment planning with an unacceptable level of risk, 62 a level of moderate risk and 31 an acceptable level of risk. The FMEA method, used in the industrial domain and applied here to health care, is an effective tool for the management of risks in patient care. However, the time and training requirements necessary to implement this method should not be underestimated. Copyright © 2012 Société française de radiothérapie oncologique (SFRO). Published by Elsevier SAS. All rights reserved.

  5. Mitochondrial DNA, restoring Beethovens music.

    PubMed

    Merheb, Maxime; Vaiedelich, Stéphane; Maniguet, Thiérry; Hänni, Catherine

    2016-01-01

    Great ancient composers have endured many obstacles and constraints which are very difficult to understand unless we perform the restoration process of ancient music. Species identification in leather used during manufacturing is the key step to start such a restoration process in order to produce a facsimile of a museum piano. Our study reveals the species identification in the leather covering the hammer head in a piano created by Erard in 1802. This is the last existing piano similar to the piano that Beethoven used with its leather preserved in its original state. The leather sample was not present in a homogeneous piece, yet combined with glue. Using a DNA extraction method that avoids PCR inhibitors; we discovered that sheep and cattle are the origin of the combination. To identify the species in the leather, we focused on the amounts of mitochondrial DNA in both leather and glue and results have led us to the conclusion that the leather used to cover the hammer head in this piano was made of cattle hide.

  6. Missing data reconstruction using Gaussian mixture models for fingerprint images

    NASA Astrophysics Data System (ADS)

    Agaian, Sos S.; Yeole, Rushikesh D.; Rao, Shishir P.; Mulawka, Marzena; Troy, Mike; Reinecke, Gary

    2016-05-01

    Publisher's Note: This paper, originally published on 25 May 2016, was replaced with a revised version on 16 June 2016. If you downloaded the original PDF, but are unable to access the revision, please contact SPIE Digital Library Customer Service for assistance. One of the most important areas in biometrics is matching partial fingerprints in fingerprint databases. Recently, significant progress has been made in designing fingerprint identification systems for missing fingerprint information. However, a dependable reconstruction of fingerprint images still remains challenging due to the complexity and the ill-posed nature of the problem. In this article, both binary and gray-level images are reconstructed. This paper also presents a new similarity score to evaluate the performance of the reconstructed binary image. The offered fingerprint image identification system can be automated and extended to numerous other security applications such as postmortem fingerprints, forensic science, investigations, artificial intelligence, robotics, all-access control, and financial security, as well as for the verification of firearm purchasers, driver license applicants, etc.

  7. Who we were and who we will be: the temporal context of women's in-group stereotype content.

    PubMed

    Morton, Thomas A; Rabinovich, Anna; Postmes, Tom

    2012-06-01

    Research has elaborated considerably on the dimensions of out-group stereotype content and on the origins and functions of different content combinations. Less attention has been given to the origins and functions of in-group stereotype content. We argue that in-group stereotypes are likely to serve different social identity functions, and thus attract different content, dependent on individual differences in in-group identification and on the temporal perspective of the perceiver. Two studies (Ns = 43 and 93) found that women's in-group stereotype content varied as a function of gender group identification and temporal perspective. When the past was primed, highly identified women generated stereotypes that emphasized the warmth (but not competence) of their group. When the future was primed, highly identified women generated stereotypes that emphasized the competence (as well as warmth) of their group. These results are discussed in terms of the use of stereotypes for social creativity versus social change. © 2012 The British Psychological Society.

  8. Optimum electrode configuration selection for electrical resistance change based damage detection in composites using an effective independence measure

    NASA Astrophysics Data System (ADS)

    Escalona, Luis; Díaz-Montiel, Paulina; Venkataraman, Satchi

    2016-04-01

    Laminated carbon fiber reinforced polymer (CFRP) composite materials are increasingly used in aerospace structures due to their superior mechanical properties and reduced weight. Assessing the health and integrity of these structures requires non-destructive evaluation (NDE) techniques to detect and measure interlaminar delamination and intralaminar matrix cracking damage. The electrical resistance change (ERC) based NDE technique uses the inherent changes in conductive properties of the composite to characterize internal damage. Several works that have explored the ERC technique have been limited to thin cross-ply laminates with simple linear or circular electrode arrangements. This paper investigates a method of optimum selection of electrode configurations for delamination detection in thick cross-ply laminates using ERC. Inverse identification of damage requires numerical optimization of the measured response with a model predicted response. Here, the electrical voltage field in the CFRP composite laminate is calculated using finite element analysis (FEA) models for different specified delamination size and locations, and location of ground and current electrodes. Reducing the number of sensor locations and measurements is needed to reduce hardware requirements, and computational effort needed for inverse identification. This paper explores the use of effective independence (EI) measure originally proposed for sensor location optimization in experimental vibration modal analysis. The EI measure is used for selecting the minimum set of resistance measurements among all possible combinations of selecting a pair of electrodes among the n electrodes. To enable use of EI to ERC required, it is proposed in this research a singular value decomposition SVD to obtain a spectral representation of the resistance measurements in the laminate. The effectiveness of EI measure in eliminating redundant electrode pairs is demonstrated by performing inverse identification of damage using the full set of resistance measurements and the reduced set of measurements. The investigation shows that the EI measure is effective for optimally selecting the electrode pairs needed for resistance measurements in ERC based damage detection.

  9. Mitochondrial cytochrome b DNA sequence variations: an approach to fish species identification in processed fish products.

    PubMed

    Pepe, Tiziana; Trotta, Michele; di Marco, Isolina; Cennamo, Paola; Anastasio, Aniello; Cortesi, Maria Luisa

    2005-02-01

    The identification of fish species in food products is problematic because morphological features of the fish are partially or completely lost during processing. It is important to determine fish origin because of the increasing international seafood trade and because European Community Regulation 104/2000 requires that the products be labeled correctly. Sequence analysis of PCR products from a conserved region of the cytochrome b gene was used to identity fish species belonging to the families Gadidae and Merluccidae in 18 different processed fish products. This method allowed the identification of fish species in all samples. Fish in all of the examined products belonged to these two families, with the exception of one sample of smoked baccalà (salt cod), which was not included in the Gadidae cluster.

  10. A Fully Coupled Simulation and Optimization Scheme for the Design of 3D Powder Injection Molding Processes

    NASA Astrophysics Data System (ADS)

    Ayad, G.; Song, J.; Barriere, T.; Liu, B.; Gelin, J. C.

    2007-05-01

    The paper is concerned with optimization and parametric identification of Powder Injection Molding process that consists first in injection of powder mixture with polymer binder and then to the sintering of the resulting powders parts by solid state diffusion. In the first part, one describes an original methodology to optimize the injection stage based on the combination of Design Of Experiments and an adaptive Response Surface Modeling. Then the second part of the paper describes the identification strategy that one proposes for the sintering stage, using the identification of sintering parameters from dilatometer curves followed by the optimization of the sintering process. The proposed approaches are applied to the optimization for manufacturing of a ceramic femoral implant. One demonstrates that the proposed approach give satisfactory results.

  11. Selectivity of similar compounds' identification using IR spectrometry: β-Lactam antibiotics

    NASA Astrophysics Data System (ADS)

    Sadlej-Sosnowska, Nina; Ocios, Agnieszka; Fuks, Leon

    2006-07-01

    The study aims to develop a reliable, quantitative method for positive identification or discrimination of a substance, when it is compared to a set of similar ones. In the course of the study a group of structurally related compounds, namely a set of β-lactam antimicrobial agents has been explored. Identification of a substance was based on the comparison of its spectrum with that of a reference material by using two functional algorithms. The algorithm based on the calculation of correlation coefficient between the first derivatives of the spectra has been proved more powerful than that using the original spectra. Then the results in a few spectral regions were likened. Limiting values were proposed for correlation coefficients that allow for qualification of a substance as identical to the reference one.

  12. Electronegativity identification of novel superhard materials.

    PubMed

    Li, Keyan; Wang, Xingtao; Zhang, Fangfang; Xue, Dongfeng

    2008-06-13

    We show that electronegativity can be used to effectively identify the hardness of crystal materials on the basis of a new microscopic model for hardness. Bond electronegativity is proposed to characterize the electron-holding energy of a bond, which is the intrinsic origin of hardness. Applying this model to c-BC(2)N materials, we confirm the proper bond composition of the experimentally observed phase of c-BC(2)N, in which the bond ratio N(C-C):N(B-N):N(B-C):N(C-N) is 3:3:1:1. A number of bonds that can or cannot form a superhard material are qualitatively distinguished, which enables us to explore novel superhard materials by screening possible elemental combinations.

  13. Founder effect in 20 Afrikaner kindreds with pseudoxanthoma elasticum.

    PubMed

    Torrington, M; Viljoen, D L

    1991-01-05

    The pedigrees of 20 families with pseudoxanthoma elasticum (PXE) were investigated. The analyses involved 13 generations up to and including the initial settlers, who arrived in the Cape before 1660. Four settler surnames predominate in these pedigrees. Because of the marriage patterns of the settlers' descendants it was necessary to classify the four surnames into two groups. It is suggested that these two groups are the founder groups of present-day PXE patients. Similar genealogical studies have been performed on kindreds with familial polyposis, familial heart block and familial hypercholesterolaemia, among other disorders. Due to geographical isolation, political developments and cultural factors in the Afrikaner, these investigations are feasible and often lead to the identification of founder origin.

  14. Identification of Ice Nucleation Active Sites on Feldspar Dust Particles

    PubMed Central

    2015-01-01

    Mineral dusts originating from Earth’s crust are known to be important atmospheric ice nuclei. In agreement with earlier studies, feldspar was found as the most active of the tested natural mineral dusts. Here we investigated in closer detail the reasons for its activity and the difference in the activity of the different feldspars. Conclusions are drawn from scanning electron microscopy, X-ray powder diffraction, infrared spectroscopy, and oil-immersion freezing experiments. K-feldspar showed by far the highest ice nucleation activity. Finally, we give a potential explanation of this effect, finding alkali-metal ions having different hydration shells and thus an influence on the ice nucleation activity of feldspar surfaces. PMID:25584435

  15. [Development of throat clearing herbal teas].

    PubMed

    Puodziūniene, Gene; Janulis, Valdimaras; Milasius, Arvydas; Budnikas, Milasius

    2004-01-01

    Medicinal herbs in tea for throat clearing are used from ancient times. Taking into consideration the bronchial mucus secretion stimulating and antispasmodic, antimicrobial, antiphlogistic and stimulating effect on the ciliated epithelium two new formulations of throat clearing herbal tea were originated. The first formulation consists of liquorice roots, sweet fennel and thyme, and the second one consists of pine gemmae, thyme and elder flowers. The methods for identification and assay of the active substances of the components were adapted. The purity of the mixtures was regulated by the limitation of the loss on drying, total ash, microbial contamination, contamination with radionuclides, heavy metals, pesticides and foreign matter. Expiry date of both throat clearing herbal teas was confirmed to be 2 years.

  16. Development of a genetic tool for product regulation in the diverse British pig breed market.

    PubMed

    Wilkinson, Samantha; Archibald, Alan L; Haley, Chris S; Megens, Hendrik-Jan; Crooijmans, Richard P M A; Groenen, Martien A M; Wiener, Pamela; Ogden, Rob

    2012-11-15

    The application of DNA markers for the identification of biological samples from both human and non-human species is widespread and includes use in food authentication. In the food industry the financial incentive to substituting the true name of a food product with a higher value alternative is driving food fraud. This applies to British pork products where products derived from traditional pig breeds are of premium value. The objective of this study was to develop a genetic assay for regulatory authentication of traditional pig breed-labelled products in the porcine food industry in the United Kingdom. The dataset comprised of a comprehensive coverage of breed types present in Britain: 460 individuals from 7 traditional breeds, 5 commercial purebreds, 1 imported European breed and 1 imported Asian breed were genotyped using the PorcineSNP60 beadchip. Following breed-informative SNP selection, assignment power was calculated for increasing SNP panel size. A 96-plex assay created using the most informative SNPs revealed remarkably high genetic differentiation between the British pig breeds, with an average FST of 0.54 and Bayesian clustering analysis also indicated that they were distinct homogenous populations. The posterior probability of assignment of any individual of a presumed origin actually originating from that breed given an alternative breed origin was > 99.5% in 174 out of 182 contrasts, at a test value of log(LR) > 0. Validation of the 96-plex assay using independent test samples of known origin was successful; a subsequent survey of market samples revealed a high level of breed label conformity. The newly created 96-plex assay using selected markers from the PorcineSNP60 beadchip enables powerful assignment of samples to traditional breed origin and can effectively identify mislabelling, providing a highly effective tool for DNA analysis in food forensics.

  17. Development of a genetic tool for product regulation in the diverse British pig breed market

    PubMed Central

    2012-01-01

    Background The application of DNA markers for the identification of biological samples from both human and non-human species is widespread and includes use in food authentication. In the food industry the financial incentive to substituting the true name of a food product with a higher value alternative is driving food fraud. This applies to British pork products where products derived from traditional pig breeds are of premium value. The objective of this study was to develop a genetic assay for regulatory authentication of traditional pig breed-labelled products in the porcine food industry in the United Kingdom. Results The dataset comprised of a comprehensive coverage of breed types present in Britain: 460 individuals from 7 traditional breeds, 5 commercial purebreds, 1 imported European breed and 1 imported Asian breed were genotyped using the PorcineSNP60 beadchip. Following breed-informative SNP selection, assignment power was calculated for increasing SNP panel size. A 96-plex assay created using the most informative SNPs revealed remarkably high genetic differentiation between the British pig breeds, with an average FST of 0.54 and Bayesian clustering analysis also indicated that they were distinct homogenous populations. The posterior probability of assignment of any individual of a presumed origin actually originating from that breed given an alternative breed origin was > 99.5% in 174 out of 182 contrasts, at a test value of log(LR) > 0. Validation of the 96-plex assay using independent test samples of known origin was successful; a subsequent survey of market samples revealed a high level of breed label conformity. Conclusion The newly created 96-plex assay using selected markers from the PorcineSNP60 beadchip enables powerful assignment of samples to traditional breed origin and can effectively identify mislabelling, providing a highly effective tool for DNA analysis in food forensics. PMID:23150935

  18. Replication profile of Saccharomyces cerevisiae chromosome VI.

    PubMed

    Friedman, K L; Brewer, B J; Fangman, W L

    1997-11-01

    An understanding of the replication programme at the genome level will require the identification and characterization of origins of replication through large, contiguous regions of DNA. As a step toward this goal, origin efficiencies and replication times were determined for 10 ARSs spanning most of the 270 kilobase (kb) chromosome VI of Saccharomyces cerevisiae. Chromosome VI shows a wide variation in the percentage of cell cycles in which different replication origins are utilized. Most of the origins are activated in only a fraction of cells, suggesting that the pattern of origin usage on chromosome VI varies greatly within the cell population. The replication times of fragments containing chromosome VI origins show a temporal pattern that has been recognized on other chromosomes--the telomeres replicate late in S phase, while the central region of the chromosome replicates early. As demonstrated here for chromosome VI, analysis of the direction of replication fork movement along a chromosome and determination of replication time by measuring a period of hemimethylation may provide an efficient means of surveying origin activity over large regions of the genome.

  19. A computable phenotype for asthma case identification in adult and pediatric patients: External validation in the Chicago Area Patient-Outcomes Research Network (CAPriCORN).

    PubMed

    Afshar, Majid; Press, Valerie G; Robison, Rachel G; Kho, Abel N; Bandi, Sindhura; Biswas, Ashvini; Avila, Pedro C; Kumar, Harsha Vardhan Madan; Yu, Byung; Naureckas, Edward T; Nyenhuis, Sharmilee M; Codispoti, Christopher D

    2017-10-13

    Comprehensive, rapid, and accurate identification of patients with asthma for clinical care and engagement in research efforts is needed. The original development and validation of a computable phenotype for asthma case identification occurred at a single institution in Chicago and demonstrated excellent test characteristics. However, its application in a diverse payer mix, across different health systems and multiple electronic health record vendors, and in both children and adults was not examined. The objective of this study is to externally validate the computable phenotype across diverse Chicago institutions to accurately identify pediatric and adult patients with asthma. A cohort of 900 asthma and control patients was identified from the electronic health record between January 1, 2012 and November 30, 2014. Two physicians at each site independently reviewed the patient chart to annotate cases. The inter-observer reliability between the physician reviewers had a κ-coefficient of 0.95 (95% CI 0.93-0.97). The accuracy, sensitivity, specificity, negative predictive value, and positive predictive value of the computable phenotype were all above 94% in the full cohort. The excellent positive and negative predictive values in this multi-center external validation study establish a useful tool to identify asthma cases in in the electronic health record for research and care. This computable phenotype could be used in large-scale comparative-effectiveness trials.

  20. OSIRIS-REx Solar Array Illumination Test

    NASA Image and Video Library

    2016-08-05

    Inside the Payload Hazardous Servicing Facility at NASA's Kennedy Space Center in Florida, illumination testing is underway on the power-producing solar arrays for the agency’s Origins, Spectral Interpretation, Resource Identification, Security-Regolith Explorer, or OSIRIS-REx spacecraft. Targeted for liftoff Sept. 8, 2016, OSIRIS-Rex will be the first U.S. mission to sample an asteroid, retrieve at least two ounces of surface material and return it to Earth for study. The asteroid, Bennu, may hold clues to the origin of the solar system and the source of water and organic molecules found on Earth.

  1. OSIRIS-REx Solar Array Illumination Test

    NASA Image and Video Library

    2016-08-05

    Inside the Payload Hazardous Servicing Facility at NASA's Kennedy Space Center in Florida, illumination testing is underway on the power -producing solar arrays for the agency’s Origins, Spectral Interpretation, Resource Identification, Security-Regolith Explorer, or OSIRIS-REx spacecraft. Targeted for liftoff Sept. 8, 2016, OSIRIS-Rex will be the first U.S. mission to sample an asteroid, retrieve at least two ounces of surface material and return it to Earth for study. The asteroid, Bennu, may hold clues to the origin of the solar system and the source of water and organic molecules found on Earth.

  2. OSIRIS-REx Rollout for Launch

    NASA Image and Video Library

    2016-09-07

    The United Launch Alliance Atlas V rocket arrives at Space Launch Complex 41 at Cape Canaveral Air Force Station in Florida. The launch vehicle will boost NASA’s Origins, Spectral Interpretation, Resource Identification, Security-Regolith Explorer, or OSIRIS-REx spacecraft. This will be the first U.S. mission to sample an asteroid, retrieve at least two ounces of surface material and return it to Earth for study. The asteroid, Bennu, may hold clues to the origin of the solar system and the source of water and organic molecules found on Earth.

  3. OSIRIS-REx Rollout for Launch

    NASA Image and Video Library

    2016-09-07

    After leaving the Vertical Integration Facility, a United Launch Alliance Atlas V rocket arrives at Space Launch Complex 41 at Cape Canaveral Air Force Station in Florida. The launch vehicle will boost NASA’s Origins, Spectral Interpretation, Resource Identification, Security-Regolith Explorer, or OSIRIS-REx spacecraft. This will be the first U.S. mission to sample an asteroid, retrieve at least two ounces of surface material and return it to Earth for study. The asteroid, Bennu, may hold clues to the origin of the solar system and the source of water and organic molecules found on Earth.

  4. OSIRIS-REx Rollout for Launch

    NASA Image and Video Library

    2016-09-07

    The United Launch Alliance Atlas V rocket arrives at Space Launch Complex 41 at Cape Canaveral Air Force Station in Florida. The launch vehicle will boost NASA’s Origins, Spectral Interpretation, Resource Identification, Security-Regolith Explorer, or OSIRIS-REx spacecraft. This will be the first U.S. mission to sample an asteroid, retrieve at least two ounces of surface material and return it to Earth for study. The asteroid, Bennu, may hold clues to the origin of the solar system and the source of water and organic molecules found on Earth. Photo credit: NASA/Kim Shiflett

  5. OSIRIS-REx NASA Social

    NASA Image and Video Library

    2016-09-07

    Social media followers were briefed by NASA scientists on asteroids, how they relate to the origins of our solar system and the search for life beyond Earth, during a NASA Social presentation in the Operations Support Building II at the agency’s Kennedy Space Center in Florida. The presentation took place before launch of the agency’s Origins, Spectral Interpretation, Resource Identification, Security-Regolith Explorer, or OSIRIS-REx spacecraft. From the left, are Dante Lauretta, OSIRIS-REx principal investigator from the University of Arizona at Tucson, and Christina Richey, OSIRIS-REx deputy program scientists at NASA Headquarters in Washington.

  6. 40 CFR 52.2465 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... engineering practice (GEP) stack height,” “hazardous air pollutant,” “nearby,” “stationary source” and... good engineering practice (GEP) stack height requirements submitted on May 12, 1986 by the Virginia... Executive Director, Virginia State Air Pollution Control Board, transmitting the revised good engineering...

  7. Identification of highly variable supernumerary chromosome segments in an asexual pathogen

    USDA-ARS?s Scientific Manuscript database

    Supernumerary chromosome segments are known to harbor different transposons from their essential counterparts. The aim of this study was to investigate the role of transposons in the origin and evolution of supernumerary segments in the asexual fungal pathogen Fusariumvirguliforme. We compared the g...

  8. 40 CFR 52.536 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... Florida Department of Pollution Control. (15) Revised limits on sulfur dioxide emissions from fossil-fuel... specific Fossil Fuel Steam Generators, submitted on November 6, 1978, and February 3, 1979, by the Florida..., fossil fuel steam generators-visible emissions, submitted on October 19, 1979; revision describing...

  9. 40 CFR 52.536 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Florida Department of Pollution Control. (15) Revised limits on sulfur dioxide emissions from fossil-fuel... specific Fossil Fuel Steam Generators, submitted on November 6, 1978, and February 3, 1979, by the Florida..., fossil fuel steam generators-visible emissions, submitted on October 19, 1979; revision describing...

  10. 40 CFR 52.536 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Florida Department of Pollution Control. (15) Revised limits on sulfur dioxide emissions from fossil-fuel... specific Fossil Fuel Steam Generators, submitted on November 6, 1978, and February 3, 1979, by the Florida..., fossil fuel steam generators-visible emissions, submitted on October 19, 1979; revision describing...

  11. 40 CFR 52.536 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... Florida Department of Pollution Control. (15) Revised limits on sulfur dioxide emissions from fossil-fuel... specific Fossil Fuel Steam Generators, submitted on November 6, 1978, and February 3, 1979, by the Florida..., fossil fuel steam generators-visible emissions, submitted on October 19, 1979; revision describing...

  12. 40 CFR 52.200 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... plan to incorporate Federal Prevention of Significant Deterioration (PSD) Regulations 40 CFR 52.21 by... Plan for Prevention of Significant Deterioration (PSD) of Air Quality Supplement Arkansas Plan of Implementation for Air Pollution Control (PSD nitrogen dioxide increments), as adopted on May 25, 1990, by the...

  13. 40 CFR 52.200 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... plan to incorporate Federal Prevention of Significant Deterioration (PSD) Regulations 40 CFR 52.21 by... Plan for Prevention of Significant Deterioration (PSD) of Air Quality Supplement Arkansas Plan of Implementation for Air Pollution Control (PSD nitrogen dioxide increments), as adopted on May 25, 1990, by the...

  14. 40 CFR 52.200 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... plan to incorporate Federal Prevention of Significant Deterioration (PSD) Regulations 40 CFR 52.21 by... Plan for Prevention of Significant Deterioration (PSD) of Air Quality Supplement Arkansas Plan of Implementation for Air Pollution Control (PSD nitrogen dioxide increments), as adopted on May 25, 1990, by the...

  15. 50 CFR 17.52 - Permits-similarity of appearance.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... species designated as Endangered or Threatened due to its similarity of appearance. Such a permit may... information: Documentary evidence, sworn affidavits, or other information to show species identification and the origin of the wildlife or plant in question. This information may be in the form of hunting...

  16. 50 CFR 17.52 - Permits-similarity of appearance.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... species designated as Endangered or Threatened due to its similarity of appearance. Such a permit may... information: Documentary evidence, sworn affidavits, or other information to show species identification and the origin of the wildlife or plant in question. This information may be in the form of hunting...

  17. 50 CFR 17.52 - Permits-similarity of appearance.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... species designated as Endangered or Threatened due to its similarity of appearance. Such a permit may... information: Documentary evidence, sworn affidavits, or other information to show species identification and the origin of the wildlife or plant in question. This information may be in the form of hunting...

  18. 50 CFR 17.52 - Permits-similarity of appearance.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... species designated as Endangered or Threatened due to its similarity of appearance. Such a permit may... information: Documentary evidence, sworn affidavits, or other information to show species identification and the origin of the wildlife or plant in question. This information may be in the form of hunting...

  19. Learning Disabilities: An Interdisciplinary Perspective.

    ERIC Educational Resources Information Center

    Zollinger, Ruth H., Ed.; Klein, Nancy K., Ed.

    Presented are six papers originally delivered at a colloquium series on the problems of the learning disabled child, with emphasis on a multidisciplinary perspective. In "One Psychologist's Perspective on Learning Disabilities," J. Kessler provides an overview of the field with sections on definition and identification, etiology, testing as a…

  20. 40 CFR 52.1100 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Coating, Interior Sheet Drum Lining). (i) Incorporation by reference. (A) Revisions to COMAR 10.18.21.10... paper and plastic parts coating, including definitions for the terms fountain, letterpress printing... coating, and the addition of definitions for the terms sheet-fed paper coating and ultraviolet curable...

  1. Identification and initial characterization of a novel turkey-origin picobirnavirus using a metagenomic approach

    USDA-ARS?s Scientific Manuscript database

    Using the Genome Sequencer FLX Titanium technology (Roche, 454 Life Sciences), a ribonucleic acid (RNA) virus-specific metagenome was prepared using the pooled intestinal contents collected from North Carolina turkey flocks experiencing enteric disease signs. This analysis produced 6526 contigs rang...

  2. 40 CFR 52.515 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...) Amendments to Sections 8-2:702 (Definitions), 8-2:708 (Fuel Burning Particulate Emission) and 8-2:720..., submitted on December 6, 1983. (25) Plan revision, excluding the required vehicle emission inspection... Carbon Monoxide Attainment Plan consisting of an approvable vehicle emission inspection and maintenance...

  3. Identification of stars and digital version of the catalogue of 1958 by Brodskaya and Shajn

    NASA Astrophysics Data System (ADS)

    Gorbunov, M. A.; Shlyapnikov, A. A.

    2017-12-01

    The following topics are considered: the identification of objects on search maps, the determination of their coordinates at the epoch of 2000, and converting the published version of the catalogue of 1958 by Brodskaya and Shajn into a machine-readable format. The statistics for photometric and spectral data from the original catalogue is presented. A digital version of the catalogue is described, as well as its presentation in HTML, VOTable and AJS formats and the basic principles of work in the interactive application of International Virtual Observatory - the Aladin Sky Atlas.

  4. Who is Hispanic? Definitions and their consequences.

    PubMed Central

    Zimmerman, R S; Vega, W A; Gil, A G; Warheit, G J; Apospori, E; Biafora, F

    1994-01-01

    What is the appropriate method for classifying Spanish-speaking-origin inhabitants of the United States? This paper presents relevant data from the first wave of a longitudinal study of adolescents in the greater Miami area. As expected, the broadest definition--"up to third generation" Hispanic--identified the largest proportion of the sample as Hispanic, whereas parent self-report placed the smallest proportion into the Hispanic category. When policymakers are concerned about enumerating the entire Hispanic population, a definition broader than self-identification should be used; in estimating prevalence rates, however, the use of self-identification may be adequate. PMID:7998642

  5. Systematic toxicological analysis: computer-assisted identification of poisons in biological materials.

    PubMed

    Stimpfl, Th; Demuth, W; Varmuza, K; Vycudilik, W

    2003-06-05

    A new software was developed to improve the chances for identification of a "general unknown" in complex biological materials. To achieve this goal, the total ion current chromatogram was simplified by filtering the acquired mass spectra via an automated subtraction procedure, which removed mass spectra originating from the sample matrix, as well as interfering substances from the extraction procedure. It could be shown that this tool emphasizes mass spectra of exceptional compounds, and therefore provides the forensic toxicologist with further evidence-even in cases where mass spectral data of the unknown compound are not available in "standard" spectral libraries.

  6. B-Raf kinase inhibitors: hit enrichment through scaffold hopping.

    PubMed

    Gopalsamy, Ariamala; Shi, Mengxiao; Hu, Yongbo; Lee, Frederick; Feldberg, Larry; Frommer, Eileen; Kim, Steven; Collins, Karen; Wojciechowicz, Donald; Mallon, Robert

    2010-04-15

    In continuation of our efforts toward hit identification and optimization for a B-Raf kinase project, we have employed a scaffold hopping strategy. The original HTS hit scaffold pyrazolo[1,5-a]pyrimidine was replaced with different thienopyrimidine and thienopyridine scaffolds to append the optimal pharmacophore moieties in order to generate novel B-raf kinase inhibitors with desirable potency and properties. This strategy led to the identification of additional lead compound 11b which had good enzyme and cell potency, while maintaining selectivity over a number of kinases. Copyright 2010 Elsevier Ltd. All rights reserved.

  7. Fingerprint Ridge Density as a Potential Forensic Anthropological Tool for Sex Identification.

    PubMed

    Dhall, Jasmine Kaur; Kapoor, Anup Kumar

    2016-03-01

    In cases of partial or poor print recovery and lack of database/suspect print, fingerprint evidence is generally neglected. In light of such constraints, this study was designed to examine whether ridge density can aid in narrowing down the investigation for sex identification. The study was conducted on the right-hand index digit of 245 males and 246 females belonging to the Punjabis of Delhi region. Five ridge density count areas, namely upper radial, radial, ulnar, upper ulnar, and proximal, were selected and designated. Probability of sex origin was calculated, and stepwise discriminant function analysis was performed to determine the discriminating ability of the selected areas. Females were observed with a significantly higher ridge density than males in all the five areas. Discriminant function analysis and logistic regression exhibited 96.8% and 97.4% accuracy, respectively, in sex identification. Hence, fingerprint ridge density is a potential tool for sex identification, even from partial prints. © 2015 American Academy of Forensic Sciences.

  8. DART - LTQ ORBITRAP as an expedient tool for the identification of synthetic cannabinoids.

    PubMed

    Habala, Ladislav; Valentová, Jindra; Pechová, Iveta; Fuknová, Mária; Devínsky, Ferdinand

    2016-05-01

    Synthetic cannabinoids as designer drugs constitute a major problem due to their rapid increase in number and the difficulties connected with their identification in complex mixtures. DART (Direct Analysis in Real Time) has emerged as an advantageous tool for the direct and rapid analysis of complex samples by mass spectrometry. Here we report on the identification of six synthetic cannabinoids originating from seized material in various matrices, employing the combination of ambient pressure ion source DART and hybrid ion trap - LTQ ORBITRAP mass spectrometer. This report also describes the sampling techniques for the provided herbal material containing the cannabinoids, either directly as plant parts or as an extract in methanol and their influence on the outcome of the analysis. The high resolution mass spectra supplied by the LTQ ORBITRAP instrument allowed for an unambiguous assignment of target compounds. The utilized instrumental coupling proved to be a convenient way for the identification of synthetic cannabinoids in real-world samples. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  9. MALDI TOF imaging mass spectrometry in clinical pathology: a valuable tool for cancer diagnostics (review).

    PubMed

    Kriegsmann, Jörg; Kriegsmann, Mark; Casadonte, Rita

    2015-03-01

    Matrix-assisted laser desorption/ionization (MALDI) time-of-flight (TOF) imaging mass spectrometry (IMS) is an evolving technique in cancer diagnostics and combines the advantages of mass spectrometry (proteomics), detection of numerous molecules, and spatial resolution in histological tissue sections and cytological preparations. This method allows the detection of proteins, peptides, lipids, carbohydrates or glycoconjugates and small molecules.Formalin-fixed paraffin-embedded tissue can also be investigated by IMS, thus, this method seems to be an ideal tool for cancer diagnostics and biomarker discovery. It may add information to the identification of tumor margins and tumor heterogeneity. The technique allows tumor typing, especially identification of the tumor of origin in metastatic tissue, as well as grading and may provide prognostic information. IMS is a valuable method for the identification of biomarkers and can complement histology, immunohistology and molecular pathology in various fields of histopathological diagnostics, especially with regard to identification and grading of tumors.

  10. Multi-Task Learning with Low Rank Attribute Embedding for Multi-Camera Person Re-Identification.

    PubMed

    Su, Chi; Yang, Fan; Zhang, Shiliang; Tian, Qi; Davis, Larry Steven; Gao, Wen

    2018-05-01

    We propose Multi-Task Learning with Low Rank Attribute Embedding (MTL-LORAE) to address the problem of person re-identification on multi-cameras. Re-identifications on different cameras are considered as related tasks, which allows the shared information among different tasks to be explored to improve the re-identification accuracy. The MTL-LORAE framework integrates low-level features with mid-level attributes as the descriptions for persons. To improve the accuracy of such description, we introduce the low-rank attribute embedding, which maps original binary attributes into a continuous space utilizing the correlative relationship between each pair of attributes. In this way, inaccurate attributes are rectified and missing attributes are recovered. The resulting objective function is constructed with an attribute embedding error and a quadratic loss concerning class labels. It is solved by an alternating optimization strategy. The proposed MTL-LORAE is tested on four datasets and is validated to outperform the existing methods with significant margins.

  11. Is the corticomedullary index valid to distinguish human from nonhuman bones: a multislice computed tomography study.

    PubMed

    Rérolle, Camille; Saint-Martin, Pauline; Dedouit, Fabrice; Rousseau, Hervé; Telmon, Norbert

    2013-09-10

    The first step in the identification process of bone remains is to determine whether they are of human or nonhuman origin. This issue may arise when only a fragment of bone is available, as the species of origin is usually easily determined on a complete bone. The present study aims to assess the validity of a morphometric method used by French forensic anthropologists to determine the species of origin: the corticomedullary index (CMI), defined by the ratio of the diameter of the medullary cavity to the total diameter of the bone. We studied the constancy of the CMI from measurements made on computed tomography images (CT scans) of different human bones, and compared our measurements with reference values selected in the literature. The measurements obtained on CT scans at three different sites of 30 human femurs, 24 tibias, and 24 fibulas were compared between themselves and with the CMI reference values for humans, pigs, dogs and sheep. Our results differed significantly from these reference values, with three exceptions: the proximal quarter of the femur and mid-fibular measurements for the human CMI, and the proximal quarter of the tibia for the sheep CMI. Mid-tibial, mid-femoral, and mid-fibular measurements also differed significantly between themselves. Only 22.6% of CT scans of human bones were correctly identified as human. We concluded that the CMI is not an effective method for determining the human origin of bone remains. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  12. Tracing the first steps of American sturgeon pioneers in Europe

    USGS Publications Warehouse

    Ludwig, A.; Arndt, U.; Lippold, S.; Benecke, N.; Debus, L.; King, T.L.; Matsumura, S.

    2008-01-01

    Background. A Baltic population of Atlantic sturgeon was founded ???1,200 years ago by migrants from North America, but after centuries of persistence, the population was extirpated in the 1960s, mainly as a result of over-harvest and habitat alterations. As there are four genetically distinct groups of Atlantic sturgeon inhabiting North American rivers today, we investigated the genetic provenance of the historic Baltic population by ancient DNA analyses using mitochondrial and nuclear markers. Results. The phylogeographic signal obtained from multilocus microsatellite DNA genotypes and mitochondrial DNA control region haplotypes, when compared to existing baseline datasets from extant populations, allowed for the identification of the region-of-origin of the North American Atlantic sturgeon founders. Moreover, statistical and simulation analyses of the multilocus genotypes allowed for the calculation of the effective number of individuals that originally founded the European population of Atlantic sturgeon. Our findings suggest that the Baltic population of A. oxyrinchus descended from a relatively small number of founders originating from the northern extent of the species' range in North America. Conclusion. These results demonstrate that the most northerly distributed North American A. oxyrinchus colonized the Baltic Sea ???1,200 years ago, suggesting that Canadian specimens should be the primary source of broodstock used for restoration in Baltic rivers. This study illustrates the great potential of patterns obtained from ancient DNA to identify population-of-origin to investigate historic genotype structure of extinct populations. ?? 2008 Ludwig et al; licensee BioMed Central Ltd.

  13. The fibroblast surface markers FAP, anti-fibroblast, and FSP are expressed by cells of epithelial origin and may be altered during epithelial-to-mesenchymal transition.

    PubMed

    Kahounová, Zuzana; Kurfürstová, Daniela; Bouchal, Jan; Kharaishvili, Gvantsa; Navrátil, Jiří; Remšík, Ján; Šimečková, Šárka; Študent, Vladimír; Kozubík, Alois; Souček, Karel

    2017-04-06

    The identification of fibroblasts and cancer-associated fibroblasts from human cancer tissue using surface markers is difficult, especially because the markers used currently are usually not expressed solely by fibroblasts, and the identification of fibroblast-specific surface molecules is still under investigation. It was aimed to compare three commercially available antibodies in the detection of different surface epitopes of fibroblasts (anti-fibroblast, fibroblast activation protein α, and fibroblast surface protein). The specificity of their expression, employing fibroblast cell lines and tumor-derived fibroblasts from breast and prostate tissues was investigated. Both the established fibroblast cell line HFF-1 and ex vivo primary fibroblasts isolated from breast and prostate cancer tissues expressed the tested surface markers to different degrees. Surprisingly, those markers were expressed also by permanent cell lines of epithelial origin, both benign and cancer-derived (breast-cell lines MCF 10A, HMLE and prostate-cell lines BPH-1, DU 145, and PC-3). The expression of fibroblast activation protein α increased on the surface of previously described models of epithelial cells undergoing epithelial-to-mesenchymal transition in response to treatment with TGF-β1. To prove the co-expression of the fibroblast markers on cells of epithelial origin, we used freshly dissociated human prostate and breast cancer tissues. The results confirmed the co-expression of anti-fibroblast and fibroblast surface protein on CD31/CD45-negative/EpCAM-positive epithelial cells. In summary, our data support the findings that the tested fibroblast markers are not fibroblast specific and may be expressed also by cells of epithelial origin (e.g., cells undergoing EMT). Therefore, the expression of these markers should be interpreted with caution, and the combination of several epitopes for both positive (anti-fibroblast or fibroblast activation protein α) and negative (EpCAM) identification of fibroblasts from breast and prostate tumor tissues is advised. © 2017 International Society for Advancement of Cytometry. © 2017 International Society for Advancement of Cytometry.

  14. Are Associations Between "Sexist" Video Games and Decreased Empathy Toward Women Robust? A Reanalysis of Gabbiadini et al. 2016.

    PubMed

    Ferguson, Christopher J; Donnellan, M Brent

    2017-12-01

    Gabbiadini, A., Riva, P., Andrighetto, L., Volpato, C., & Bushman, B, (PloS ONE, 2016) provided evidence for a connection between "sexist" video games and decreased empathy toward girls using an experimental paradigm. These claims are based on a moderated mediation model. They reported a three-way interaction between game condition, gender, and avatar identification when predicting masculine ideology in their original study. Masculine ideology was associated, in turn, with decreased empathy. However, there were no main experimental effects for video game condition on empathy. The current analysis considers the strength of the evidence for claims made in the original study on a sample of 153 adolescents (M age  = 16.812, SD = 1.241; 44.2% male). We confirmed that there was little evidence for an overall effect of game condition on empathy toward girls or women. We tested the robustness of the original reported moderated mediation models against other, theoretically derived alternatives, and found that effects differed based on how variables were measured (using alternatives in their public data file) and the statistical model used. The experimental groups differed significantly and substantially in terms of age suggesting that there might have been issues with the procedures used to randomly assign participants to conditions. These results highlight the need for preregistration of experimental protocols in video game research and raise some concerns about how moderated mediation models are used to support causal inferences. These results call into question whether use of "sexist" video games is a causal factor in the development of reduced empathy toward girls and women among adolescents.

  15. Output-only modal dynamic identification of frames by a refined FDD algorithm at seismic input and high damping

    NASA Astrophysics Data System (ADS)

    Pioldi, Fabio; Ferrari, Rosalba; Rizzi, Egidio

    2016-02-01

    The present paper deals with the seismic modal dynamic identification of frame structures by a refined Frequency Domain Decomposition (rFDD) algorithm, autonomously formulated and implemented within MATLAB. First, the output-only identification technique is outlined analytically and then employed to characterize all modal properties. Synthetic response signals generated prior to the dynamic identification are adopted as input channels, in view of assessing a necessary condition for the procedure's efficiency. Initially, the algorithm is verified on canonical input from random excitation. Then, modal identification has been attempted successfully at given seismic input, taken as base excitation, including both strong motion data and single and multiple input ground motions. Rather than different attempts investigating the role of seismic response signals in the Time Domain, this paper considers the identification analysis in the Frequency Domain. Results turn-out very much consistent with the target values, with quite limited errors in the modal estimates, including for the damping ratios, ranging from values in the order of 1% to 10%. Either seismic excitation and high values of damping, resulting critical also in case of well-spaced modes, shall not fulfill traditional FFD assumptions: this shows the consistency of the developed algorithm. Through original strategies and arrangements, the paper shows that a comprehensive rFDD modal dynamic identification of frames at seismic input is feasible, also at concomitant high damping.

  16. Toxocara eggs shed by dogs and cats and their molecular and morphometric species-specific identification: is the finding of T. cati eggs shed by dogs of epidemiological relevance?

    PubMed

    Fahrion, A S; Schnyder, M; Wichert, B; Deplazes, P

    2011-04-19

    Intestinal infections with Toxocara cati and Toxocara canis in their definitive host (felids and canids, respectively) are diagnosed by egg identification in faeces using coproscopical techniques. The Toxocara species is assumed to comply with the species from which the examined faeces were obtained, i.e. T. cati in cats and T. canis in dogs. We isolated and measured Toxocara eggs from faecal samples of 36 cats and 35 dogs from Switzerland and identified the Toxocara species by PCR. Amongst the isolates originating from dogs, 24 (68.5%) were determined as T. canis and 11 (31.5%) as T. cati. In all samples originating from cats, only T. cati was identified. Based on PCR identification, eggs of T. canis (n=241) and T. cati (n=442) were measured, revealing statistically significant different (p<0.001) mean sizes of 62.3 by 72.7 μm for T. cati and 74.8 by 86.0 μm for T. canis eggs. Considering that coprophagy is not unusual for dogs, a considerable percentage of Toxocara infections coproscopically diagnosed in dogs, as well as assumptions on anthelminthic resistance in regularly treated dogs, might in fact relate to intestinal passages of eggs following the uptake of other animals' faeces. Copyright © 2010 Elsevier B.V. All rights reserved.

  17. A new efficient method of generating photoaffinity beads for drug target identification.

    PubMed

    Nishiya, Yoichi; Hamada, Tomoko; Abe, Masayuki; Takashima, Michio; Tsutsumi, Kyoko; Okawa, Katsuya

    2017-02-15

    Affinity purification is one of the most prevalent methods for the target identification of small molecules. Preparation of an appropriate chemical for immobilization, however, is a tedious and time-consuming process. A decade ago, a photoreaction method for generating affinity beads was reported, where compounds are mixed with agarose beads carrying a photoreactive group (aryldiazirine) and then irradiated with ultraviolet light under dry conditions to form covalent attachment. Although the method has proven useful for identifying drug targets, the beads suffer from inefficient ligand incorporation and tend to shrink and aggregate, which can cause nonspecific binding and low reproducibility. We therefore decided to craft affinity beads free from these shortcomings without compromising the ease of preparation. We herein report a modified method; first, a compound of interest is mixed with a crosslinker having an activated ester and a photoreactive moiety on each end. This mixture is then dried in a glass tube and irradiated with ultraviolet light. Finally, the conjugates are dissolved and reacted with agarose beads with a primary amine. This protocol enabled us to immobilize compounds more efficiently (approximately 500-fold per bead compared to the original method) and generated beads without physical deterioration. We herein demonstrated that the new FK506-immobilized beads specifically isolated more FKBP12 than the original beads, thereby proving our method to be applicable to target identification experiments. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. 48 CFR 252.246-7007 - Contractor Counterfeit Electronic Part Detection and Avoidance System.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... chain back to the original manufacturer, whether the electronic parts are supplied as discrete...; clear identification of the name and location of supply chain intermediaries from the manufacturer to... the supply chain until such time that the parts are determined to be authentic. (7) Methodologies to...

  19. 77 FR 25524 - Sixth Meeting: RTCA, NextGen Advisory Committee

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-30

    ... provide the following information: Name (as it appears on your identification), Company, Phone number, Country of origin. FOR FURTHER INFORMATION CONTACT: The RTCA Secretariat, 1150 18th Street NW., Suite 910....rtca.org . SUPPLEMENTARY INFORMATION: Pursuant to section 10(a)(2) of the Federal Advisory Committee...

  20. 40 CFR 52.1960 - Original Identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ..., 1972. (Non-regulatory) (7) Sections 16.1, 16.3, and 16.5 of Regulation No. 16, “Control of Emissions of... plan revision designed to achieve the ozone standard in Tulsa County, including control strategy... Quality Control Implementation Plan” and all revisions submitted by Oklahoma that were federally approved...

  1. 40 CFR 52.800 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... were submitted on the dates specified. (1) The State Air Pollution Control Board submitted a SO2 control strategy for the City of Indianapolis on March 16, 1972. (2) The Governor submitted Pub. L. 100...) The State Air Pollution Control Board submitted additional information on surveillance methodology...

  2. 40 CFR 52.1960 - Original Identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ..., 1972. (Non-regulatory) (7) Sections 16.1, 16.3, and 16.5 of Regulation No. 16, “Control of Emissions of... plan revision designed to achieve the ozone standard in Tulsa County, including control strategy... Quality Control Implementation Plan” and all revisions submitted by Oklahoma that were federally approved...

  3. 40 CFR 52.1960 - Original Identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ..., 1972. (Non-regulatory) (7) Sections 16.1, 16.3, and 16.5 of Regulation No. 16, “Control of Emissions of... plan revision designed to achieve the ozone standard in Tulsa County, including control strategy... Quality Control Implementation Plan” and all revisions submitted by Oklahoma that were federally approved...

  4. 40 CFR 52.800 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... were submitted on the dates specified. (1) The State Air Pollution Control Board submitted a SO2 control strategy for the City of Indianapolis on March 16, 1972. (2) The Governor submitted Pub. L. 100...) The State Air Pollution Control Board submitted additional information on surveillance methodology...

  5. 40 CFR 52.1960 - Original Identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ..., 1972. (Non-regulatory) (7) Sections 16.1, 16.3, and 16.5 of Regulation No. 16, “Control of Emissions of... plan revision designed to achieve the ozone standard in Tulsa County, including control strategy... Quality Control Implementation Plan” and all revisions submitted by Oklahoma that were federally approved...

  6. Combining genomic selection and gene identification for crop improvement

    USDA-ARS?s Scientific Manuscript database

    The use of genetic information to predict the value of individuals in plant breeding populations began about 40 years ago. The original paradigm was to identify genomic regions with outsize influence on a trait of economic value, then to use markers in that genomic region to select individuals carry...

  7. 40 CFR 52.1783 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Residual Oil Burners 15 NCAC 2D.0902, Applicability (Volatile Organic Compounds) 15 NCAC 2H.0603... or Residual Oil Burners 15 NCAC 2D.0939, Determination of Volatile Organic Compound Emissions (B) The... 2D.0943, Synthetic Organic Chemical and Polymer Manufacturing 15 NCAC 2D.0944, Manufacturing of...

  8. Interannual Variation in Stable Carbon and Nitrogen Isotope Biogeochemistry of the Mattaponi River, Virginia

    EPA Science Inventory

    This manuscript addresses the difficult issue of identifying the origin of particulate organic matter (POM) in estuaries . . . The objectives of this study were to quantify spatial and temporal variability of the C and N stable isotope composition of suspended POM, and to identif...

  9. The Interacting Dynamics of Institutional Racism in Higher Education

    ERIC Educational Resources Information Center

    Pilkington, Andrew

    2013-01-01

    This article has its origins in the Macpherson report's contention that public organisations in British society are characterised by institutional racism. Drawing upon the Parekh report's identification of ten components of institutional racism, the article examines which, if any, of these components are manifest in a university in Central England…

  10. 40 CFR 52.800 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... were submitted on the dates specified. (1) The State Air Pollution Control Board submitted a SO2 control strategy for the City of Indianapolis on March 16, 1972. (2) The Governor submitted Pub. L. 100...) The State Air Pollution Control Board submitted additional information on surveillance methodology...

  11. Characterization of 14 microsatellite markers for genetic analysis and cultivar identification of walnut

    USDA-ARS?s Scientific Manuscript database

    One hundred and forty-seven primer pairs originally designed to amplify microsatellites, also known as simple sequence repeats (SSR), in black walnut (Juglans nigra L.) were screened for utility in persian walnut (J. regia L.). Based on scorability and number of informative polymorphisms, the best 1...

  12. Origins of the Xylella fastidiosa prophage-like regions and their impact in genome differentiation

    USDA-ARS?s Scientific Manuscript database

    Xylella fastidiosa is a Gram negative plant pathogen causing many economically important diseases, and analyses of completely sequenced X. fastidiosa genome strains allowed the identification of many prophage-like elements and possibly phage remnants, accounting for up to 15% of the genome compositi...

  13. 40 CFR 52.200 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... were held was submitted by the State Department of Pollution Control and Ecology on January 25, 1972. (Non-regulatory) (2) State Department of Pollution Control and Ecology letter outlining projected... submitted by the Department of Pollution Control and Ecology on July 7, 1972. (4) June 27, 1975, letter from...

  14. 40 CFR 52.200 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... were held was submitted by the State Department of Pollution Control and Ecology on January 25, 1972. (Non-regulatory) (2) State Department of Pollution Control and Ecology letter outlining projected... submitted by the Department of Pollution Control and Ecology on July 7, 1972. (4) June 27, 1975, letter from...

  15. 49 CFR 172.802 - Components of a security plan.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... from origin to destination, including shipments stored incidental to movement. (b) The security plan must also include the following: (1) Identification by job title of the senior management official... business and must make the security plan available upon request, at a reasonable time and location, to an...

  16. 40 CFR 52.1837 - Original identification of plan section.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... deterioration of air quality (PSD) regulations to incorporate the nitrogen dioxide (NO2) increments and to make... permitting of new PSD sources, PSD major modifications, and sources to be located in nonattainment areas. (23... changes in the Federal PSD permitting regulations for utility pollution control projects, PM-10 increments...

  17. 40 CFR 52.1837 - Original identification of plan section.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... deterioration of air quality (PSD) regulations to incorporate the nitrogen dioxide (NO2) increments and to make... permitting of new PSD sources, PSD major modifications, and sources to be located in nonattainment areas. (23... changes in the Federal PSD permitting regulations for utility pollution control projects, PM-10 increments...

  18. 40 CFR 52.1837 - Original identification of plan section.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... deterioration of air quality (PSD) regulations to incorporate the nitrogen dioxide (NO2) increments and to make... permitting of new PSD sources, PSD major modifications, and sources to be located in nonattainment areas. (23... changes in the Federal PSD permitting regulations for utility pollution control projects, PM-10 increments...

  19. 40 CFR 52.1837 - Original identification of plan section.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... deterioration of air quality (PSD) regulations to incorporate the nitrogen dioxide (NO2) increments and to make... permitting of new PSD sources, PSD major modifications, and sources to be located in nonattainment areas. (23... changes in the Federal PSD permitting regulations for utility pollution control projects, PM-10 increments...

  20. 40 CFR 52.1837 - Original identification of plan section.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... deterioration of air quality (PSD) regulations to incorporate the nitrogen dioxide (NO2) increments and to make... permitting of new PSD sources, PSD major modifications, and sources to be located in nonattainment areas. (23... changes in the Federal PSD permitting regulations for utility pollution control projects, PM-10 increments...

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