Science.gov

Sample records for image library search

  1. How Users Search the Library from a Single Search Box

    ERIC Educational Resources Information Center

    Lown, Cory; Sierra, Tito; Boyer, Josh

    2013-01-01

    Academic libraries are turning increasingly to unified search solutions to simplify search and discovery of library resources. Unfortunately, very little research has been published on library user search behavior in single search box environments. This study examines how users search a large public university library using a prominent, single…

  2. Image-analysis library

    NASA Technical Reports Server (NTRS)

    1980-01-01

    MATHPAC image-analysis library is collection of general-purpose mathematical and statistical routines and special-purpose data-analysis and pattern-recognition routines for image analysis. MATHPAC library consists of Linear Algebra, Optimization, Statistical-Summary, Densities and Distribution, Regression, and Statistical-Test packages.

  3. The NCSA Astronomy Digital Image Library

    NASA Astrophysics Data System (ADS)

    Plante, Raymond L.; Crutcher, Richard M.; Sharpe, Randall K.

    We announce the opening of the NCSA Astronomy Digital Image Library (URL = http://imagelib.ncsa.uiuc.edu/imagelib.html). The mission of the Library is to collect fully processed astronomical images in FITS format and make them available to the research community and the general public via the World Wide Web. Users may search the Library's contents, browse preview images, and download the full FITS images. All items contained in the Library may either be accessed via the HTML interface or through unique URNs. The latter method allows for easy linking to Library items from other databases or hypertext documents on the Web. The Library is expected to provide many benefits not only to users retrieving information but also to authors who add to the images in the Library's collection.

  4. Library Instruction and Online Database Searching.

    ERIC Educational Resources Information Center

    Mercado, Heidi

    1999-01-01

    Reviews changes in online database searching in academic libraries. Topics include librarians conducting all searches; the advent of end-user searching and the need for user instruction; compact disk technology; online public catalogs; the Internet; full text databases; electronic information literacy; user education and the remote library user;…

  5. The North Carolina State University Libraries Search Experience: Usability Testing Tabbed Search Interfaces for Academic Libraries

    ERIC Educational Resources Information Center

    Teague-Rector, Susan; Ballard, Angela; Pauley, Susan K.

    2011-01-01

    Creating a learnable, effective, and user-friendly library Web site hinges on providing easy access to search. Designing a search interface for academic libraries can be particularly challenging given the complexity and range of searchable library collections, such as bibliographic databases, electronic journals, and article search silos. Library…

  6. Tandem mass spectrometry spectral libraries and library searching.

    PubMed

    Deutsch, Eric W

    2011-01-01

    Spectral library searching in the field of proteomics has been gaining visibility and use in the last few years, primarily due to the expansion of public proteomics data repositories and the large spectral libraries that can be generated from them. Spectral library searching has several advantages over conventional sequence searching: it is generally much faster, and has higher specificity and sensitivity. The speed increase is primarily, due to having a smaller, fully indexable search space of real spectra that are known to be observable. The increase in specificity and sensitivity is primarily due to the ability of a search engine to utilize the known intensities of the fragment ions, rather than just comparing with theoretical spectra as is done with sequence searching. The main disadvantage of spectral library searching is that one can only identify peptide ions that have been seen before and are stored in the spectral library. In this chapter, an overview of spectral library searching and the libraries currently available are presented.

  7. Online Database Searching in Smaller Public Libraries.

    ERIC Educational Resources Information Center

    Roose, Tina

    1983-01-01

    Online database searching experiences of nine Illinois public libraries--Arlington Heights, Deerfield, Elk Grove Village, Evanston, Glenview, Northbrook, Schaumburg Township, Waukegan, Wilmette--are discussed, noting search costs, user charges, popular databases, library acquisition, interaction with users, and staff training. Three sources are…

  8. Planetary Image Geometry Library

    NASA Technical Reports Server (NTRS)

    Deen, Robert C.; Pariser, Oleg

    2010-01-01

    The Planetary Image Geometry (PIG) library is a multi-mission library used for projecting images (EDRs, or Experiment Data Records) and managing their geometry for in-situ missions. A collection of models describes cameras and their articulation, allowing application programs such as mosaickers, terrain generators, and pointing correction tools to be written in a multi-mission manner, without any knowledge of parameters specific to the supported missions. Camera model objects allow transformation of image coordinates to and from view vectors in XYZ space. Pointing models, specific to each mission, describe how to orient the camera models based on telemetry or other information. Surface models describe the surface in general terms. Coordinate system objects manage the various coordinate systems involved in most missions. File objects manage access to metadata (labels, including telemetry information) in the input EDRs and RDRs (Reduced Data Records). Label models manage metadata information in output files. Site objects keep track of different locations where the spacecraft might be at a given time. Radiometry models allow correction of radiometry for an image. Mission objects contain basic mission parameters. Pointing adjustment ("nav") files allow pointing to be corrected. The object-oriented structure (C++) makes it easy to subclass just the pieces of the library that are truly mission-specific. Typically, this involves just the pointing model and coordinate systems, and parts of the file model. Once the library was developed (initially for Mars Polar Lander, MPL), adding new missions ranged from two days to a few months, resulting in significant cost savings as compared to rewriting all the application programs for each mission. Currently supported missions include Mars Pathfinder (MPF), MPL, Mars Exploration Rover (MER), Phoenix, and Mars Science Lab (MSL). Applications based on this library create the majority of operational image RDRs for those missions. A

  9. Automated medical image library creation for education.

    PubMed

    Smith, Mark; Feied, Craig; Gillam, Michael; Handler, Jonathan

    2006-01-01

    The authors describe a method to create a medical teaching library that is automatically maintained, contains tens of thousands of radiologic images and is built using existing, internal, hospital dictations, radiologic images, and an off-the-shelf commercial search engine product (Google Inc.).

  10. Image analysis library software development

    NASA Technical Reports Server (NTRS)

    Guseman, L. F., Jr.; Bryant, J.

    1977-01-01

    The Image Analysis Library consists of a collection of general purpose mathematical/statistical routines and special purpose data analysis/pattern recognition routines basic to the development of image analysis techniques for support of current and future Earth Resources Programs. Work was done to provide a collection of computer routines and associated documentation which form a part of the Image Analysis Library.

  11. Medical image libraries: ICoS project

    NASA Astrophysics Data System (ADS)

    Honniball, John; Thomas, Peter

    1999-08-01

    FOr use of digital techniques for the production, manipulation and storage of images has resulted in the creation of digital image libraries. These libraries often store many thousands of images. While provision of storage media for such large amounts of data has been straightforward, provision of effective searching and retrieval tools has not. Medicine relies heavily on images as a diagnostic tool. The most obvious example is the x-ray, but many other image forms are in everyday use. Advances in technology are affecting the ways medical images are generated, stored and retrieved. The paper describes the work of the Image COding and Segmentation to Support Variable Rate Transmission Channels and Variable Resolution Platforms (ICoS) research project currently under way in Bristol, UK. ICoS is a project of the Mobile of England and Hewlett-Packard Research Laboratories Europe. Funding is provided by the Engineering and PHysical Sciences Research Council. The aim of the ICoS project is to demonstrate the practical application of computer networking to medical image libraries. Work at the University of the West of England concentrates on user interface and indexing issues. Metadata is used to organize the images, coded using the WWW Consortium standard Resource Description Framework. We are investigating the application of such standards to medical images, one outcome being to implement a metadata-based image library. This paper describes the ICoS project in detail and discuses both metadata system and user interfaces in the context of medical applications.

  12. The Library as Search Engine

    ERIC Educational Resources Information Center

    Chronicle of Higher Education, 2007

    2007-01-01

    This article presents a Technology Forum that focuses on online archives and their role in academe. The forum brought together Daniel Greenstein, associate vice provost for scholarly information and university librarian at the California Digital Library of the University of California; Adam Smith, group business-product manager for the Google Book…

  13. Evaluation of Federated Searching Options for the School Library

    ERIC Educational Resources Information Center

    Abercrombie, Sarah E.

    2008-01-01

    Three hosted federated search tools, Follett One Search, Gale PowerSearch Plus, and WebFeat Express, were configured and implemented in a school library. Databases from five vendors and the OPAC were systematically searched. Federated search results were compared with each other and to the results of the same searches in the database's native…

  14. Image Searching across the Web.

    ERIC Educational Resources Information Center

    Pack, Thomas

    2002-01-01

    Discusses how to find digital images on the Web. Considers images and copyright; provides an overview of the search capabilities of six search engines, including AltaVista, Google, AllTheWeb.com, Ditto.com, Picsearch, and Lycos; and describes specialized image search engines. (LRW)

  15. ESS: The Library of Congress Experimental Search System.

    ERIC Educational Resources Information Center

    Wilder, Dean; Greenfield, Rich

    1997-01-01

    Describes the Library of Congress's Experimental Search System (ESS), a Web-based online public access catalog that introduced new search methods to replace Boolean searching as well as powerful navigational aids for browsing and cross-linking. Discusses problems, ESS user comments, acceptance by Library of Congress staff, and future…

  16. A Corporate Library's "Single Search Box" Solution

    ERIC Educational Resources Information Center

    Waldstein, Robert

    2013-01-01

    Alcatel-Lucent has had an internal library website called InfoView since 1993. They always had pages for the various diverse resources they maintained for Alcatel-Lucent employees, such as books, serials, artifacts, market reports, and discounts. Each page had two search boxes: one for a "site" search on all pages and one searching the…

  17. Use of an Academic Library Web Site Search Engine.

    ERIC Educational Resources Information Center

    Fagan, Jody Condit

    2002-01-01

    Describes an analysis of the search engine logs of Southern Illinois University, Carbondale's library to determine how patrons used the site search. Discusses results that showed patrons did not understand the function of the search and explains improvements that were made in the Web site and in online reference services. (Author/LRW)

  18. Federated Search and the Library Web Site: A Study of Association of Research Libraries Member Web Sites

    ERIC Educational Resources Information Center

    Williams, Sarah C.

    2010-01-01

    The purpose of this study was to investigate how federated search engines are incorporated into the Web sites of libraries in the Association of Research Libraries. In 2009, information was gathered for each library in the Association of Research Libraries with a federated search engine. This included the name of the federated search service and…

  19. Designing Search: Effective Search Interfaces for Academic Library Web Sites

    ERIC Educational Resources Information Center

    Teague-Rector, Susan; Ghaphery, Jimmy

    2008-01-01

    Academic libraries customize, support, and provide access to myriad information systems, each with complex graphical user interfaces. The number of possible information entry points on an academic library Web site is both daunting to the end-user and consistently challenging to library Web site designers. Faced with the challenges inherent in…

  20. The British Library Initiatives for Access Seminar: Digital Imaging.

    ERIC Educational Resources Information Center

    Alexander, Michael

    1996-01-01

    Provides an overview of the British Library's Initiatives for Access program which uses digital imaging. Highlights include digitization of microfilm, the electronic "Beowulf", electronic photographic viewing system, computer software that uses neural networks and fuzzy matching to provide links to search terms, and international…

  1. Image Editing Via Searching Source Image

    NASA Astrophysics Data System (ADS)

    Yu, Han; Deng, Liang-Jian

    Image editing has important applications by changing the image texture, illumination, target location, etc. As an important application of Poisson equation, Poisson image editing processes images on the gradient domain and has been applied to seamless clone, selection editing, image denoising, etc. In this paper, we present a new application of Poisson image editing, which is based on searching source image. The main feature of the new application is all modifying information comes from the source image. Experimental results show that the proposed application performs well.

  2. Is Library Database Searching a Language Learning Activity?

    ERIC Educational Resources Information Center

    Bordonaro, Karen

    2010-01-01

    This study explores how non-native speakers of English think of words to enter into library databases when they begin the process of searching for information in English. At issue is whether or not language learning takes place when these students use library databases. Language learning in this study refers to the use of strategies employed by…

  3. Visualizing Document Classification: A Search Aid for the Digital Library.

    ERIC Educational Resources Information Center

    Lieu, Yew-Huey; Dantzig, Paul; Sachs, Martin; Corey, James T.; Hinnebusch, Mark T.; Damashek, Marc; Cohen, Jonathan

    2000-01-01

    Discusses access to digital libraries on the World Wide Web via Web browsers and describes the design of a language-independent document classification system to help users of the Florida Center for Library Automation analyze search query results. Highlights include similarity scores, clustering, graphical representation of document similarity,…

  4. Annotating images by mining image search results.

    PubMed

    Wang, Xin-Jing; Zhang, Lei; Li, Xirong; Ma, Wei-Ying

    2008-11-01

    Although it has been studied for years by the computer vision and machine learning communities, image annotation is still far from practical. In this paper, we propose a novel attempt at model-free image annotation, which is a data-driven approach that annotates images by mining their search results. Some 2.4 million images with their surrounding text are collected from a few photo forums to support this approach. The entire process is formulated in a divide-and-conquer framework where a query keyword is provided along with the uncaptioned image to improve both the effectiveness and efficiency. This is helpful when the collected data set is not dense everywhere. In this sense, our approach contains three steps: 1) the search process to discover visually and semantically similar search results, 2) the mining process to identify salient terms from textual descriptions of the search results, and 3) the annotation rejection process to filter out noisy terms yielded by Step 2. To ensure real-time annotation, two key techniques are leveraged-one is to map the high-dimensional image visual features into hash codes, the other is to implement it as a distributed system, of which the search and mining processes are provided as Web services. As a typical result, the entire process finishes in less than 1 second. Since no training data set is required, our approach enables annotating with unlimited vocabulary and is highly scalable and robust to outliers. Experimental results on both real Web images and a benchmark image data set show the effectiveness and efficiency of the proposed algorithm. It is also worth noting that, although the entire approach is illustrated within the divide-and conquer framework, a query keyword is not crucial to our current implementation. We provide experimental results to prove this.

  5. Building and Searching Tandem Mass Spectral Libraries for Peptide Identification*

    PubMed Central

    Lam, Henry

    2011-01-01

    Spectral library searching is an emerging approach in peptide identifications from tandem mass spectra, a critical step in proteomic data analysis. Conceptually, the premise of this approach is that the tandem MS fragmentation pattern of a peptide under some fixed conditions is a reproducible fingerprint of that peptide, such that unknown spectra acquired under the same conditions can be identified by spectral matching. In actual practice, a spectral library is first meticulously compiled from a large collection of previously observed and identified tandem MS spectra, usually obtained from shotgun proteomics experiments of complex mixtures. Then, a query spectrum is then identified by spectral matching using recently developed spectral search engines. This review discusses the basic principles of the two pillars of this approach: spectral library construction, and spectral library searching. An overview of the software tools available for these two tasks, as well as a high-level description of the underlying algorithms, will be given. Finally, several new methods that utilize spectral libraries for peptide identification in ways other than straightforward spectral matching will also be described. PMID:21900153

  6. Searching for a New Way to Reach Patrons: A Search Engine Optimization Pilot Project at Binghamton University Libraries

    ERIC Educational Resources Information Center

    Rushton, Erin E.; Kelehan, Martha Daisy; Strong, Marcy A.

    2008-01-01

    Search engine use is one of the most popular online activities. According to a recent OCLC report, nearly all students start their electronic research using a search engine instead of the library Web site. Instead of viewing search engines as competition, however, librarians at Binghamton University Libraries decided to employ search engine…

  7. After Losing Users in Catalogs, Libraries Find Better Search Software

    ERIC Educational Resources Information Center

    Parry, Marc

    2010-01-01

    Traditional online library catalogs do not tend to order search results by ranked relevance, and they can befuddle users with clunky interfaces. However, that's changing because of two technology trends. First, a growing number of universities are shelling out serious money for sophisticated software that makes exploring their collections more…

  8. Personalisation of Generic Library Search Results Using Student Enrolment Information

    ERIC Educational Resources Information Center

    Alaofi, Marwah; Rumantir, Grace

    2015-01-01

    This research explores the application of implicit personalisation techniques in information retrieval in the context of education. Motivated by the large and ever-growing volume of resources in digital libraries, coupled with students' limited experience in searching for these resources, particularly in translating their information needs into…

  9. Image Searching on the Excite Web Search Engine.

    ERIC Educational Resources Information Center

    Goodrum, Abby; Spink, Amanda

    2001-01-01

    Examines visual information needs as expressed in users' Web image queries on the Excite search engine. Discusses metadata; content-based image retrieval; user interaction with images; terms per query; term frequency; and implications for the development of models for visual information retrieval and for the design of Web search engines.…

  10. Beyond Text Queries and Ranked Lists: Faceted Search in Library Catalogs

    ERIC Educational Resources Information Center

    Niu, Xi

    2012-01-01

    Since the adoption of faceted search in a small number of academic libraries in 2006, faceted library catalogs have gained popularity in many academic and public libraries. This dissertation seeks to understand whether faceted search improves the interactions between searchers and library catalogs and to understand ways that facets are used in…

  11. Manually Classifying User Search Queries on an Academic Library Web Site

    ERIC Educational Resources Information Center

    Chapman, Suzanne; Desai, Shevon; Hagedorn, Kat; Varnum, Ken; Mishra, Sonali; Piacentine, Julie

    2013-01-01

    The University of Michigan Library wanted to learn more about the kinds of searches its users were conducting through the "one search" search box on the Library Web site. Library staff conducted two investigations. A preliminary investigation in 2011 involved the manual review of the 100 most frequently occurring queries conducted…

  12. Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics.

    PubMed

    Lam, Henry; Deutsch, Eric W; Aebersold, Ruedi

    2010-01-01

    The challenge of estimating false discovery rates (FDR) in peptide identification from MS/MS spectra has received increased attention in proteomics. The simple approach of target-decoy searching has become popular with traditional sequence (database) searching methods, but has yet to be practiced in spectral (library) searching, an emerging alternative to sequence searching. We extended this target-decoy searching approach to spectral searching by developing and validating a robust method to generate realistic, but unnatural, decoy spectra. Our method involves randomly shuffling the peptide identification of each reference spectrum in the library, and repositioning each fragment ion peak along the m/z axis to match the fragment ions expected from the shuffled sequence. We show that this method produces decoy spectra that are sufficiently realistic, such that incorrect identifications are equally likely to match real and decoy spectra, a key assumption necessary for decoy counting. This approach has been implemented in the open-source library building software, SpectraST.

  13. Spectrum-based method to generate good decoy libraries for spectral library searching in peptide identifications.

    PubMed

    Cheng, Chia-Ying; Tsai, Chia-Feng; Chen, Yu-Ju; Sung, Ting-Yi; Hsu, Wen-Lian

    2013-05-03

    As spectral library searching has received increasing attention for peptide identification, constructing good decoy spectra from the target spectra is the key to correctly estimating the false discovery rate in searching against the concatenated target-decoy spectral library. Several methods have been proposed to construct decoy spectral libraries. Most of them construct decoy peptide sequences and then generate theoretical spectra accordingly. In this paper, we propose a method, called precursor-swap, which directly constructs decoy spectral libraries directly at the "spectrum level" without generating decoy peptide sequences by swapping the precursors of two spectra selected according to a very simple rule. Our spectrum-based method does not require additional efforts to deal with ion types (e.g., a, b or c ions), fragment mechanism (e.g., CID, or ETD), or unannotated peaks, but preserves many spectral properties. The precursor-swap method is evaluated on different spectral libraries and the results of obtained decoy ratios show that it is comparable to other methods. Notably, it is efficient in time and memory usage for constructing decoy libraries. A software tool called Precursor-Swap-Decoy-Generation (PSDG) is publicly available for download at http://ms.iis.sinica.edu.tw/PSDG/.

  14. Semantically Enriching the Search System of a Music Digital Library

    NASA Astrophysics Data System (ADS)

    de Juan, Paloma; Iglesias, Carlos

    Traditional search systems are usually based on keywords, a very simple and convenient mechanism to express a need for information. This is the most popular way of searching the Web, although it is not always an easy task to accurately summarize a natural language query in a few keywords. Working with keywords means losing the context, which is the only thing that can help us deal with ambiguity. This is the biggest problem of keyword-based systems. Semantic Web technologies seem a perfect solution to this problem, since they make it possible to represent the semantics of a given domain. In this chapter, we present three projects, Harmos, Semusici and Cantiga, whose aim is to provide access to a music digital library. We will describe two search systems, a traditional one and a semantic one, developed in the context of these projects and compare them in terms of usability and effectiveness.

  15. Java, Image Browsing, and the NCSA Astronomy Digital Image Library

    NASA Astrophysics Data System (ADS)

    Plante, R. L.; Goscha, D.

    We review our experience, including some lessons learned, with using Java to create data browsing tools for use with the Astronomy Digital Image Library (ADIL) and related digital library projects at NCSA\\@. We give an overview of our Image Data Browser, a generalized tool under development through a collaboration with the NCSA/NASA Project Horizon in support of access to earth and space science data. Emphasis has been placed on a design that can support a variety of data formats and applications both within and outside of astronomy. ADIL will use this tool in a variety of guises to browse and download images from the Library's collection. We see such a tool filling an important niche as a pipeline from a data repository to specialized, native data analysis software (e.g., IRAF, AIPS).

  16. Liverpool's Discovery: A University Library Applies a New Search Tool to Improve the User Experience

    ERIC Educational Resources Information Center

    Kenney, Brian

    2011-01-01

    This article features the University of Liverpool's arts and humanities library, which applies a new search tool to improve the user experience. In nearly every way imaginable, the Sydney Jones Library and the Harold Cohen Library--the university's two libraries that serve science, engineering, and medical students--support the lives of their…

  17. Amino acid alphabet size in protein evolution experiments: better to search a small library thoroughly or a large library sparsely?

    PubMed

    Muñoz, Enrique; Deem, Michael W

    2008-05-01

    We compare the results obtained from searching a smaller library thoroughly versus searching a more diverse, larger library sparsely. We study protein evolution with reduced amino acid alphabets, by simulating directed evolution experiments at three different alphabet sizes: 20, 5 and 2. We employ a physical model for evolution, the generalized NK model, that has proved successful in modeling protein evolution, antibody evolution and T-cell selection. We find that antibodies with higher affinity are found by searching a library with a larger alphabet sparsely than by searching a smaller library thoroughly, even with well-designed reduced libraries. We also find ranked amino acid usage frequencies in agreement with observations of the CDR-H3 variable region of human antibodies.

  18. Discovering How Students Search a Library Web Site: A Usability Case Study.

    ERIC Educational Resources Information Center

    Augustine, Susan; Greene, Courtney

    2002-01-01

    Discusses results of a usability study at the University of Illinois Chicago that investigated whether Internet search engines have influenced the way students search library Web sites. Results show students use the Web site's internal search engine rather than navigating through the pages; have difficulty interpreting library terminology; and…

  19. Investigating User Search Tactic Patterns and System Support in Using Digital Libraries

    ERIC Educational Resources Information Center

    Joo, Soohyung

    2013-01-01

    This study aims to investigate users' search tactic application and system support in using digital libraries. A user study was conducted with sixty digital library users. The study was designed to answer three research questions: 1) How do users engage in a search process by applying different types of search tactics while conducting different…

  20. The ELISE II Project: A Digital Image Library for Europe.

    ERIC Educational Resources Information Center

    Strunz, Bob; Waters, Mairead

    This paper describes the progress made under the ELISE II electronic image library project from a technical standpoint. The ELISE II project is a European-wide initiative that aims to provide a comprehensive electronic image library service for Europe. It is funded under the European Commission, DG XIII-E, Telematics for Libraries Initiative. The…

  1. Solar System Object Image Search: A precovery search engine

    NASA Astrophysics Data System (ADS)

    Gwyn, Stephen D. J.; Hill, Norman; Kavelaars, Jj

    2016-01-01

    While regular astronomical image archive searches can find images at a fixed location, they cannot find images of moving targets such as asteroids or comets. The Solar System Object Image Search (SSOIS) at the Canadian Astronomy Data Centre allows users to search for images of moving objects, allowing precoveries. SSOIS accepts as input either an object designation, a list of observations, a set of orbital elements, or a user-generated ephemeris for an object. It then searches for observations of that object over a range of dates. The user is then presented with a list of images containing that object from a variety of archives. Initially created to search the CFHT MegaCam archive, SSOIS has been extended to other telescopes including Gemini, Subaru/SuprimeCam, WISE, HST, the SDSS, AAT, the ING telescopes, the ESO telescopes, and the NOAO telescopes (KPNO/CTIO/WIYN), for a total of 24.5 million images. As the Pan-STARRS and Hyper Suprime-Cam archives become available, they will be incorporated as well. The SSOIS tool is located on the web at http://www.cadc-ccda.hia-iha.nrc-cnrc.gc.ca/en/ssois/.

  2. Solar System object image search: A precovery search engine

    NASA Astrophysics Data System (ADS)

    Gwyn, Stephen; Hill, Norman; Kavelaars, JJ

    2015-08-01

    While regular archive searches can find images at a fixed location, they cannot find images of moving targets such as asteroids or comets. The Solar System Object Image Search (SSOIS) at the Canadian Astronomy Data Centre allows users to search for images of moving objects, allowing precoveries. SSOIS accepts as input either a list of observations, an object designation, a set of orbital elements, or a user-generated ephemeris for an object. It then searches for observations of that object over a range of dates. The user is then presented with a list of images containing that object from a variety of archives. Initially created to search the CFHT MegaCam archive, SSOIS has been extended to other telescopes including Gemini, Subaru/SuprimeCam, WISE, HST, the SDSS, AAT, the ING telescopes, the ESO telescopes, and the NOAO telescopes (KPNO/CTIO/WIYN), for a total of 18 million images. The SSOIS tool is located on the web at http://www.cadc-ccda.hia-iha.nrc-cnrc.gc.ca/en/ssois/.

  3. Solar System object image search: A precovery search engine

    NASA Astrophysics Data System (ADS)

    Gwyn, S.; Hill, N.; Kavelaars, J.

    2014-07-01

    While regular archive searches can find images at a fixed location, they cannot find images of moving targets such as asteroids or comets. The Solar System Object Image Search (SSOIS) at the Canadian Astronomy Data Centre allows users to search for images of moving objects, allowing precoveries. SSOIS accepts as input either a list of observations, an object designation, a set of orbital elements, or a user-generated ephemeris for an object. It then searches for observations of that object over a range of dates. The user is then presented with a list of images containing that object from a variety of archives. Initially created to search the CFHT MegaCam archive, SSOIS has been extended to other telescopes including Gemini, Subaru/SuprimeCam, HST, the SDSS, AAT, the ESO telescopes, and the NOAO telescopes (KPNO/CTIO/WIYN), for a total of 7.6 million images. The SSOIS tool is located on the web at http://www.cadc-ccda.hia-iha.nrc-cnrc.gc.ca/en/ssois/.

  4. The Library, Information, and Institutional Outcomes: Searching in a Time of Change.

    ERIC Educational Resources Information Center

    Brittingham, Barbara

    1997-01-01

    Describes how the University of Rhode Island conducted its search for a newly configured position of Vice Provost for Information and Dean of University Libraries. Discusses the search committee members, the two professional "cultures" representing libraries and academic computing, degree requirements, job responsibilities and…

  5. What Do the Public Search for on the Catalogue of the State Library of Victoria?

    ERIC Educational Resources Information Center

    Waller, Vivienne

    2009-01-01

    This study examines what the public search for in the catalogue of the State Library of Victoria (SLV). As well as indicating the type of content being accessed, this gives an indication of what catalogue users expect of the State Library collection. A content analysis was undertaken of a random, stratified sample of 4,000 search queries typed in…

  6. Interactive searching of facial image databases

    NASA Astrophysics Data System (ADS)

    Nicholls, Robert A.; Shepherd, John W.; Shepherd, Jean

    1995-09-01

    A set of psychological facial descriptors has been devised to enable computerized searching of criminal photograph albums. The descriptors have been used to encode image databased of up to twelve thousand images. Using a system called FACES, the databases are searched by translating a witness' verbal description into corresponding facial descriptors. Trials of FACES have shown that this coding scheme is more productive and efficient than searching traditional photograph albums. An alternative method of searching the encoded database using a genetic algorithm is currenly being tested. The genetic search method does not require the witness to verbalize a description of the target but merely to indicate a degree of similarity between the target and a limited selection of images from the database. The major drawback of FACES is that is requires a manual encoding of images. Research is being undertaken to automate the process, however, it will require an algorithm which can predict human descriptive values. Alternatives to human derived coding schemes exist using statistical classifications of images. Since databases encoded using statistical classifiers do not have an obvious direct mapping to human derived descriptors, a search method which does not require the entry of human descriptors is required. A genetic search algorithm is being tested for such a purpose.

  7. Search prefilters to assist in library searching of infrared spectra of automotive clear coats.

    PubMed

    Lavine, Barry K; Fasasi, Ayuba; Mirjankar, Nikhil; White, Collin; Sandercock, Mark

    2015-01-01

    Clear coat searches of the infrared (IR) spectral library of the paint data query (PDQ) forensic database often generate an unusable number of hits that span multiple manufacturers, assembly plants, and years. To improve the accuracy of the hit list, pattern recognition methods have been used to develop search prefilters (i.e., principal component models) that differentiate between similar but non-identical IR spectra of clear coats on the basis of manufacturer (e.g., General Motors, Ford, Chrysler) or assembly plant. A two step procedure to develop these search prefilters was employed. First, the discrete wavelet transform was used to decompose each IR spectrum into wavelet coefficients to enhance subtle but significant features in the spectral data. Second, a genetic algorithm for IR spectral pattern recognition was employed to identify wavelet coefficients characteristic of the manufacturer or assembly plant of the vehicle. Even in challenging trials where the paint samples evaluated were all from the same manufacturer (General Motors) within a limited production year range (2000-2006), the respective assembly plant of the vehicle was correctly identified. Search prefilters to identify assembly plants were successfully validated using 10 blind samples provided by the Royal Canadian Mounted Police (RCMP) as part of a study to populate PDQ to current production years, whereas the search prefilter to discriminate among automobile manufacturers was successfully validated using IR spectra obtained directly from the PDQ database.

  8. The Science Library Catalog Project: Comparison of Children's Searching Behavior in Hypertext and a Keyword Search System.

    ERIC Educational Resources Information Center

    Borgman, Christine L.; And Others

    1991-01-01

    Reports on a continuing project to study children's use of the Science Library Catalog (SLC), a graphically based direct manipulation microcomputer interface for locating science materials in elementary school libraries. Search success on SLC, which uses HyperCard, is compared with a Boolean system; effects of age and gender are studied; and user…

  9. Visual search engine for product images

    NASA Astrophysics Data System (ADS)

    Lin, Xiaofan; Gokturk, Burak; Sumengen, Baris; Vu, Diem

    2008-01-01

    Nowadays there are many product comparison web sites. But most of them only use text information. This paper introduces a novel visual search engine for product images, which provides a brand-new way of visually locating products through Content-based Image Retrieval (CBIR) technology. We discusses the unique technical challenges, solutions, and experimental results in the design and implementation of this system.

  10. Building and searching tandem mass (MS/MS) spectral libraries for peptide identification in proteomics.

    PubMed

    Lam, Henry; Aebersold, Ruedi

    2011-08-01

    Spectral library searching is an emerging approach in peptide identifications from tandem mass spectra, a critical step in proteomic data analysis. In spectral library searching, a spectral library is first meticulously compiled from a large collection of previously observed peptide MS/MS spectra that are conclusively assigned to their corresponding amino acid sequence. An unknown spectrum is then identified by comparing it to all the candidates in the spectral library for the most similar match. This review discusses the basic principles of spectral library building and searching, describes its advantages and limitations, and provides a primer for researchers interested in adopting this new approach in their data analysis. It will also discuss the future outlook on the evolution and utility of spectral libraries in the field of proteomics.

  11. The Hybrid Search: A Mass Spectral Library Search Method for Discovery of Modifications in Proteomics.

    PubMed

    Burke, Meghan Catherine; Mirokhin, Yuri A; Tchekhovskoi, Dmitrii V; Markey, Sanford P; Heidbrink Thompson, Jenny L; Larkin, Christopher; Stein, Stephen E

    2017-04-03

    We present a mass spectral library based method to identify tandem mass spectra of peptides that contain unanticipated modifications and amino acid variants. We describe this as a 'hybrid' method because it combines matching both ion m/z and mass losses. The losses are differences in mass between an ion peak and its precursor mass. This difference, termed DeltaMass, is used to shift the product ions in the library spectrum that contain the modification, thereby allowing library product ions that contain the unexpected modification to match the query spectrum. Clustered unidentified spectra from the Clinical Proteomic Tumor Analysis Consortium (CPTAC) and Chinese hamster ovary cells were used to evaluate this method. Results demonstrate the ability of the hybrid method to identify unanticipated modifications, insertions and deletions, which may include those due to an incomplete protein sequence database or to search settings that exclude the correct identification, in high resolution tandem mass spectra without regard of their precursor mass. This has been made possible by indexing of m/z values of each fragment ion and their difference in mass from their precursor ion.

  12. Google vs. the Library (Part II): Student Search Patterns and Behaviors When Using Google and a Federated Search Tool

    ERIC Educational Resources Information Center

    Georgas, Helen

    2014-01-01

    This study examines the information-seeking behavior of undergraduate students within a research context. Student searches were recorded while the participants used Google and a library (federated) search tool to find sources (one book, two articles, and one other source of their choosing) for a selected topic. The undergraduates in this study…

  13. Histology image search using multimodal fusion.

    PubMed

    Caicedo, Juan C; Vanegas, Jorge A; Páez, Fabian; González, Fabio A

    2014-10-01

    This work proposes a histology image indexing strategy based on multimodal representations obtained from the combination of visual features and associated semantic annotations. Both data modalities are complementary information sources for an image retrieval system, since visual features lack explicit semantic information and semantic terms do not usually describe the visual appearance of images. The paper proposes a novel strategy to build a fused image representation using matrix factorization algorithms and data reconstruction principles to generate a set of multimodal features. The methodology can seamlessly recover the multimodal representation of images without semantic annotations, allowing us to index new images using visual features only, and also accepting single example images as queries. Experimental evaluations on three different histology image data sets show that our strategy is a simple, yet effective approach to building multimodal representations for histology image search, and outperforms the response of the popular late fusion approach to combine information.

  14. Learning object detectors from online image search

    NASA Astrophysics Data System (ADS)

    Tang, Feng; Tretter, Daniel R.

    2011-03-01

    Being able to detect distinguishable objects is a key component in many high level computer vision applications. Traditional methods for building such detectors require a large amount of carefully collected and cleaned data. For example to build a face detector, a large number of face images need to be collected and faces in each image need to be cropped and aligned as the data for training. This process is tedious and error-pruning. Recently more and more people are sharing their photos on the internet, if we could leverage these data for building a detector, it will save tremendous amount of effort in collecting training data. Popular internet search engines and community photo websites like Google image search, Picassa, Flickr make it possible to harvesting online images for image understanding tasks. In this paper, we develop a method leveraging images obtained from online image search to build an object detector. The proposed method can automatically identify the most distinguishable features across the downloaded images. Using these learned features, a detector can be built to detect the object in a new image. Experiments show promising results of our approach.

  15. Feedback and Exploratory Mechanisms for Assisting Library Staff Improve On-Line Catalog Searching. Final Report.

    ERIC Educational Resources Information Center

    Martin, Thomas H.; Wyman, John C.

    The purpose of this research project was to develop techniques for analyzing user searches of the Syracuse University Libraries Information Retrieval Systems (SULIRS) to enable library staff to identify and test potentially high payoff modifications to the system and/or to user documentation. The first task was an exploratory analysis of recorded…

  16. The comparative effectiveness of conventional and digital image libraries.

    PubMed

    McColl, R I; Johnson, A

    2001-03-01

    Before introducing a hospital-wide image database to improve access, navigation and retrieval speed, a comparative study between a conventional slide library and a matching image database was undertaken to assess its relative benefits. Paired time trials and personal questionnaires revealed faster retrieval rates, higher image quality, and easier viewing for the pilot digital image database. Analysis of confidentiality, copyright and data protection exposed similar issues for both systems, thus concluding that the digital image database is a more effective library system. The authors suggest that in the future, medical images will be stored on large, professionally administered, centrally located file servers, allowing specialist image libraries to be tailored locally for individual users. The further integration of the database with web technology will enable cheap and efficient remote access for a wide range of users.

  17. Integrating digital topology in image-processing libraries.

    PubMed

    Lamy, Julien

    2007-01-01

    This paper describes a method to integrate digital topology informations in image-processing libraries. This additional information allows a library user to write algorithms respecting topological constraints, for example, a seed fill or a skeletonization algorithm. As digital topology is absent from most image-processing libraries, such constraints cannot be fulfilled. We describe and give code samples for all the structures necessary for this integration, and show a use case in the form of a homotopic thinning filter inside ITK. The obtained filter can be up to a hundred times as fast as ITK's thinning filter and works for any image dimension. This paper mainly deals of integration within ITK, but can be adapted with only minor modifications to other image-processing libraries.

  18. Imaging Technology in Libraries: Photo CD Offers New Possibilities.

    ERIC Educational Resources Information Center

    Beiser, Karl

    1993-01-01

    Describes Kodak's Photo CD technology, a format for the storage and retrieval of photographic images in electronic form. Highlights include current and future Photo CD formats; computer imaging technology; ownership issues; hardware for using Photo CD; software; library and information center applications, including image collections and…

  19. Image searching in a shipping product

    NASA Astrophysics Data System (ADS)

    Equitz, Will

    1995-03-01

    Searching in image databases using image content has made the transition from the laboratory to consumer software. Storm Software is a pioneer in bringing these techniques to shrink- wrapped software applications, and this presentation describes some of the methods we use in our products and some of the experiences we have had in bringing this new technology to consumers. We describe the scope of the problem we are trying to solve as well as some of the algorithms and interfaces we used. We also describe some of the rationales (based on theory as well as on user testing) we had for the various design decisions we made. Finally, we describe some of the challenges and opportunities we see ahead. Descriptions and screen shots of two software products implementing image searching (EasyPhoto and Apple PhotoFlash) are provided. Both products were developed by Storm Software.

  20. End User Search Systems: Access to Library and Information Science Literature.

    ERIC Educational Resources Information Center

    LaBorie, Tim; Garson, Ken

    1988-01-01

    This study investigated the usefulness of end user systems to library and information science students. Seventeen volunteers were offered free searching on BRS/After Dark and DIALOG's Knowledge Index. The search itself, postsearch questionnaire, and completed research papers were analyzed for databases used, cost and time online, and precision.…

  1. Plug Your Users into Library Resources with OpenSearch Plug-Ins

    ERIC Educational Resources Information Center

    Baker, Nicholas C.

    2007-01-01

    To bring the library catalog and other online resources right into users' workspace quickly and easily without needing much more than a short XML file, the author, a reference and Web services librarian at Williams College, learned to build and use OpenSearch plug-ins. OpenSearch is a set of simple technologies and standards that allows the…

  2. Improving e-book access via a library-developed full-text search tool*

    PubMed Central

    Foust, Jill E.; Bergen, Phillip; Maxeiner, Gretchen L.; Pawlowski, Peter N.

    2007-01-01

    Purpose: This paper reports on the development of a tool for searching the contents of licensed full-text electronic book (e-book) collections. Setting: The Health Sciences Library System (HSLS) provides services to the University of Pittsburgh's medical programs and large academic health system. Brief Description: The HSLS has developed an innovative tool for federated searching of its e-book collections. Built using the XML-based Vivísimo development environment, the tool enables a user to perform a full-text search of over 2,500 titles from the library's seven most highly used e-book collections. From a single “Google-style” query, results are returned as an integrated set of links pointing directly to relevant sections of the full text. Results are also grouped into categories that enable more precise retrieval without reformulation of the search. Results/Evaluation: A heuristic evaluation demonstrated the usability of the tool and a web server log analysis indicated an acceptable level of usage. Based on its success, there are plans to increase the number of online book collections searched. Conclusion: This library's first foray into federated searching has produced an effective tool for searching across large collections of full-text e-books and has provided a good foundation for the development of other library-based federated searching products. PMID:17252065

  3. Understanding the foundation: the state of generalist search education in library schools as related to the needs of expert searchers in medical libraries

    PubMed Central

    Nicholson, Scott

    2005-01-01

    Purpose: The paper explores the current state of generalist search education in library schools and considers that foundation in respect to the Medical Library Association's statement on expert searching. Setting/Subjects: Syllabi from courses with significant searching components were examined from ten of the top library schools, as determined by the U.S. News & World Report rankings. Methodology: Mixed methods were used, but primarily quantitative bibliometric methods were used. Results: The educational focus in these searching components was on understanding the generalist searching resources and typical users and on performing a reflective search through application of search strategies, controlled vocabulary, and logic appropriate to the search tool. There is a growing emphasis on Web-based search tools and a movement away from traditional set-based searching and toward free-text search strategies. While a core set of authors is used in these courses, no core set of readings is used. Discussion/Conclusion: While library schools provide a strong foundation, future medical librarians still need to take courses that introduce them to the resources, settings, and users associated with medical libraries. In addition, as more emphasis is placed on Web-based search tools and free-text searching, instructors of the specialist medical informatics courses will need to focus on teaching traditional search methods appropriate for common tools in the medical domain. PMID:15685276

  4. State of the art of expert searching: results of a Medical Library Association survey

    PubMed Central

    Holst, Ruth; Funk, Carla J.

    2005-01-01

    Objectives: Medical Library Association (MLA) members were surveyed to gather background about the current state of expert searching in institutions. The survey results were intended to guide the recommendations of the Task Force on Expert Searching for promoting the importance of expert searching and implementing those recommendations. Methods: MLA members were surveyed, and data obtained from the survey were compiled and analyzed to answer three general questions: what is the perceived value of searching skills to the institution, how do health sciences librarians maintain and improve their searching skills, and how are searching services promoted and/or mandated in the institution. Results: There were 256 responses to the survey. Over 95% of the respondents saw their expert-searching skills were of value to their institutions, primarily through performing mediated searches and search consultations. Over 83% of the respondents believed that their searching skills had improved over the past 10 years. Most indicated that continued training was very important in maintaining and improving their skills. Respondents promoted searching services most frequently through orientations, brochures, and the libraries' Web pages. No respondent's institution mandated expert searching. Less than 2% of respondents' institutions had best practice guidelines related to expert searching, and only about 8% had guidelines or policies that identified situations where expert searching was recommended. Conclusions: The survey supports the belief that health sciences librarians still play a valuable role in searching, particularly in answering questions about treatment options and in providing education. It also highlights the need for more expert searching courses. There has been minimal discussion about the perceived need for expert-searching guidelines in the institutions represented by survey respondents. PMID:15685274

  5. Pathfinder: multiresolution region-based searching of pathology images using IRM.

    PubMed Central

    Wang, J. Z.

    2000-01-01

    The fast growth of digitized pathology slides has created great challenges in research on image database retrieval. The prevalent retrieval technique involves human-supplied text annotations to describe slide contents. These pathology images typically have very high resolution, making it difficult to search based on image content. In this paper, we present Pathfinder, an efficient multiresolution region-based searching system for high-resolution pathology image libraries. The system uses wavelets and the IRM (Integrated Region Matching) distance. Experiments with a database of 70,000 pathology image fragments have demonstrated high retrieval accuracy and high speed. The algorithm can be combined with our previously developed wavelet-based progressive pathology image transmission and browsing algorithm and is expandable for medical image databases. Images Figure 4 Figure 6 Figure 7 Figure 5 Figure 8 Figure 9 PMID:11080011

  6. Close the Textbook & Open "The Cell: An Image Library"

    ERIC Educational Resources Information Center

    Saunders, Cheston; Taylor, Amy

    2014-01-01

    Many students leave the biology classroom with misconceptions centered on cellular structure. This article presents an activity in which students utilize images from an online database called "The Cell: An Image Library" (http://www.cellimagelibrary. org/) to gain a greater understanding of the diversity of cellular structure and the…

  7. Pathfinder: multiresolution region-based searching of pathology images using IRM.

    PubMed

    Wang, J Z

    2000-01-01

    The fast growth of digitized pathology slides has created great challenges in research on image database retrieval. The prevalent retrieval technique involves human-supplied text annotations to describe slide contents. These pathology images typically have very high resolution, making it difficult to search based on image content. In this paper, we present Pathfinder, an efficient multiresolution region-based searching system for high-resolution pathology image libraries. The system uses wavelets and the IRM (Integrated Region Matching) distance. Experiments with a database of 70,000 pathology image fragments have demonstrated high retrieval accuracy and high speed. The algorithm can be combined with our previously developed wavelet-based progressive pathology image transmission and browsing algorithm and is expandable for medical image databases.

  8. An Analysis of Web Image Queries for Search.

    ERIC Educational Resources Information Center

    Pu, Hsiao-Tieh

    2003-01-01

    Examines the differences between Web image and textual queries, and attempts to develop an analytic model to investigate their implications for Web image retrieval systems. Provides results that give insight into Web image searching behavior and suggests implications for improvement of current Web image search engines. (AEF)

  9. Developing a portable GPU library for hyperspectral image processing

    NASA Astrophysics Data System (ADS)

    Pérez-Irizarry, Gabriel J.; De La Cruz-Sanchez, Francisco; Landrón-Rivera, Brian A.; Santiago, Nayda G.; Velez-Reyes, Miguel

    2012-06-01

    The increasing volume of data produced by hyperspectral image sensors have forced researches and developers to seek out new and more ecient ways of analyzing the data as quick as possible. Medical, scientic, and military applications present performance requirements for tools that perform operations on hyperspectral sensor data. By providing a hyperspectral image analysis library, we aim to accelerate hyperspectral image application development. Development of a cross-platform library, Libdect, with GPU support for hyperspectral image analysis is presented. Coupling library development with ecient hyperspectral algorithms escalates into a signicant time invest- ment in many projects or prototypes. Provided a solution to these issues, developers can implement hyperspectral image analysis applications in less time. Developers will not be focused on implementing target detection code and potential issues related to platform or GPU architecture dierences. Libdect's development team counts with previously implemented detection algorithms. By utilizing proven tools, such as CMake and CTest, to develop Libdect's infrastructure, we were able to develop and test a prototype library that provides target detection code with GPU support on Linux platforms. As a whole, Libdect is an early prototype of an open and documented example of Software Engineering practices and tools. They are put together in an eort to increase developer productivity and encourage new developers into the eld of hyperspectral image application development.

  10. Evaluation of mass spectral library search algorithms implemented in commercial software.

    PubMed

    Samokhin, Andrey; Sotnezova, Ksenia; Lashin, Vitaly; Revelsky, Igor

    2015-06-01

    Performance of several library search algorithms (against EI mass spectral databases) implemented in commercial software products ( acd/specdb, chemstation, gc/ms solution and ms search) was estimated. Test set contained 1000 mass spectra, which were randomly selected from NIST'08 (RepLib) mass spectral database. It was shown that composite (also known as identity) algorithm implemented in ms search (NIST) software gives statistically the best results: the correct compound occupied the first position in the list of possible candidates in 81% of cases; the correct compound was within the list of top ten candidates in 98% of cases. It was found that use of presearch option can lead to rejection of the correct answer from the list of possible candidates (therefore presearch option should not be used, if possible). Overall performance of library search algorithms was estimated using receiver operating characteristic curves.

  11. Using internet search engines and library catalogs to locate toxicology information.

    PubMed

    Wukovitz, L D

    2001-01-12

    The increasing importance of the Internet demands that toxicologists become aquainted with its resources. To find information, researchers must be able to effectively use Internet search engines, directories, subject-oriented websites, and library catalogs. The article will explain these resources, explore their benefits and weaknesses, and identify skills that help the researcher to improve search results and critically evaluate sources for their relevancy, validity, accuracy, and timeliness.

  12. Public Images of the Role of Information Technology in Public Libraries: Alternatives and Controversies.

    ERIC Educational Resources Information Center

    Raber, Douglas; Budd, John M.

    1999-01-01

    Discusses four competing public images of the public library and its relation to information technology, as identified in recent research: the traditional library, the resisting library, the adapting library, and the co-opted library. Suggests that the public perceives the management of public information as a complex problem requiring a variety…

  13. Deep Hashing for Scalable Image Search.

    PubMed

    Lu, Jiwen; Liong, Venice Erin; Zhou, Jie

    2017-03-03

    In this paper, we propose a new deep hashing (DH) approach to learn compact binary codes for scalable image search. Unlike most existing binary codes learning methods which usually seek a single linear projection to map each sample into a binary feature vector, we develop a deep neural network to seek multiple hierarchical non-linear transformations to learn these binary codes, so that the nonlinear relationship of samples can be well exploited. Our model is learned under three constraints at the top layer of the developed deep network: 1) the loss between the compact real-valued code and the learned binary vector is minimized, 2) the binary codes distribute evenly on each bit, and 3) different bits are as independent as possible. To further improve the discriminative power of the learned binary codes, we extend DH into supervised DH (SDH) and multi-label supervised DH (MSDH) by including a discriminative term into the objective function of DH which simultaneously maximizes the inter-class variations and minimizes the intra-class variations of the learned binary codes with the single-label and multilabel settings, respectively. Extensive experimental results on eight widely used image search datasets show that our proposed methods achieve very competitive results with the state-of-thearts.

  14. CALIL.JP, a new web service that provides one-stop searching of Japan-wide libraries' collections

    NASA Astrophysics Data System (ADS)

    Yoshimoto, Ryuuji

    Calil.JP is a new free online service that enables federated searching, marshalling and integration of Web-OPAC data on the collections of libraries from around Japan. It offers the search results through user-friendly interface. Developed with a concept of accelerating discovery of fun-to-read books and motivating users to head for libraries, Calil was initially designed mainly for public library users. It now extends to cover university libraries and special libraries. This article presents the Calil's basic capabilities, concept, progress made thus far, and plan for further development as viewed from an engineering development manager.

  15. Many Libraries Have Gone to Federated Searching to Win Users Back from Google. Is It Working?

    ERIC Educational Resources Information Center

    King, Douglas

    2008-01-01

    In the last issue, this journal asked a question on many librarians' minds, and it was pleased with the depth and variety of responses. As suggested by this journal editorial board member Oliver Pesch, readers were asked, "Many libraries have gone to federated searching to win users back from Google. Is it working?" Respondents approached the…

  16. Information Retrieval Strategies of Millennial Undergraduate Students in Web and Library Database Searches

    ERIC Educational Resources Information Center

    Porter, Brandi

    2009-01-01

    Millennial students make up a large portion of undergraduate students attending colleges and universities, and they have a variety of online resources available to them to complete academically related information searches, primarily Web based and library-based online information retrieval systems. The content, ease of use, and required search…

  17. Data Manipulation in an XML-Based Digital Image Library

    ERIC Educational Resources Information Center

    Chang, Naicheng

    2005-01-01

    Purpose: To help to clarify the role of XML tools and standards in supporting transition and migration towards a fully XML-based environment for managing access to information. Design/methodology/approach: The Ching Digital Image Library, built on a three-tier architecture, is used as a source of examples to illustrate a number of methods of data…

  18. Fast parallel tandem mass spectral library searching using GPU hardware acceleration.

    PubMed

    Baumgardner, Lydia Ashleigh; Shanmugam, Avinash Kumar; Lam, Henry; Eng, Jimmy K; Martin, Daniel B

    2011-06-03

    Mass spectrometry-based proteomics is a maturing discipline of biologic research that is experiencing substantial growth. Instrumentation has steadily improved over time with the advent of faster and more sensitive instruments collecting ever larger data files. Consequently, the computational process of matching a peptide fragmentation pattern to its sequence, traditionally accomplished by sequence database searching and more recently also by spectral library searching, has become a bottleneck in many mass spectrometry experiments. In both of these methods, the main rate-limiting step is the comparison of an acquired spectrum with all potential matches from a spectral library or sequence database. This is a highly parallelizable process because the core computational element can be represented as a simple but arithmetically intense multiplication of two vectors. In this paper, we present a proof of concept project taking advantage of the massively parallel computing available on graphics processing units (GPUs) to distribute and accelerate the process of spectral assignment using spectral library searching. This program, which we have named FastPaSS (for Fast Parallelized Spectral Searching), is implemented in CUDA (Compute Unified Device Architecture) from NVIDIA, which allows direct access to the processors in an NVIDIA GPU. Our efforts demonstrate the feasibility of GPU computing for spectral assignment, through implementation of the validated spectral searching algorithm SpectraST in the CUDA environment.

  19. IPLIB (Image processing library) user's manual

    NASA Technical Reports Server (NTRS)

    Faulcon, N. D.; Monteith, J. H.; Miller, K.

    1985-01-01

    IPLIB is a collection of HP FORTRAN 77 subroutines and functions that facilitate the use of a COMTAL image processing system driven by an HP-1000 computer. It is intended for programmers who want to use the HP 1000 to drive the COMTAL Vision One/20 system. It is assumed that the programmer knows HP 1000 FORTRAN 77 or at least one FORTRAN dialect. It is also assumed that the programmer has some familiarity with the COMTAL Vision One/20 system.

  20. ESO C Library for an Image Processing Software Environment (eclipse)

    NASA Astrophysics Data System (ADS)

    Devillard, N.

    Written in ANSI C, eclipse is a library offering numerous services related to astronomical image processing: FITS data access, various image and cube loading methods, binary image handling and filtering (including convolution and morphological filters), 2-D cross-correlation, connected components, cube and image arithmetic, dead pixel detection and correction, object detection, data extraction, flat-fielding with robust fit, image generation, statistics, photometry, image-space resampling, image combination, and cube stacking. It also contains support for mathematical tools like random number generation, FFT, curve fitting, matrices, fast median computation, and point-pattern matching. The main feature of this library is its ability to handle large amounts of input data (up to 2 GB in the current version) regardless of the amount of memory and swap available on the local machine. Another feature is the very high speed allowed by optimized C, making it an ideal base tool for programming efficient number-crunching applications, e.g., on parallel (Beowulf) systems. Running on all Unix-like platforms, eclipse is portable. A high-level interface to Python is foreseen that would allow programmers to prototype their applications much faster than through C programs.

  1. Eclipse: ESO C Library for an Image Processing Software Environment

    NASA Astrophysics Data System (ADS)

    Devillard, Nicolas

    2011-12-01

    Written in ANSI C, eclipse is a library offering numerous services related to astronomical image processing: FITS data access, various image and cube loading methods, binary image handling and filtering (including convolution and morphological filters), 2-D cross-correlation, connected components, cube and image arithmetic, dead pixel detection and correction, object detection, data extraction, flat-fielding with robust fit, image generation, statistics, photometry, image-space resampling, image combination, and cube stacking. It also contains support for mathematical tools like random number generation, FFT, curve fitting, matrices, fast median computation, and point-pattern matching. The main feature of this library is its ability to handle large amounts of input data (up to 2GB in the current version) regardless of the amount of memory and swap available on the local machine. Another feature is the very high speed allowed by optimized C, making it an ideal base tool for programming efficient number-crunching applications, e.g., on parallel (Beowulf) systems.

  2. Google vs. the Library: Student Preferences and Perceptions when Doing Research Using Google and a Federated Search Tool

    ERIC Educational Resources Information Center

    Georgas, Helen

    2013-01-01

    Federated searching was once touted as the library world's answer to Google, but ten years since federated searching technology's inception, how does it actually compare? This study focuses on undergraduate student preferences and perceptions when doing research using both Google and a federated search tool. Students were asked about their…

  3. Log analysis to understand medical professionals' image searching behaviour.

    PubMed

    Tsikrika, Theodora; Müller, Henning; Kahn, Charles E

    2012-01-01

    This paper reports on the analysis of the query logs of a visual medical information retrieval system that provides access to radiology resources. Our analysis shows that, despite sharing similarities with general Web search and also with biomedical text search, query formulation and query modification when searching for visual biomedical information have unique characteristics that need to be taken into account in order to enhance the effectiveness of the search support offered by such systems. Typical information needs of medical professionals searching radiology resources are also identified with the goal to create realistic search tasks for a medical image retrieval evaluation benchmark.

  4. A Library of Local Search Heuristics for the Vehicle Routing Problem

    SciTech Connect

    Groer, Christopher S; Golden, Bruce; Edward, Wasil

    2010-01-01

    The vehicle routing problem (VRP) is a difficult and well-studied combinatorial optimization problem. Real-world instances of the VRP can contain hundreds and even thousands of customer locations and can involve many complicating constraints, necessitating the use of heuristic methods. We present a software library of local search heuristics that allow one to quickly generate good solutions to VRP instances. The code has a logical, object-oriented design and uses efficient data structures to store and modify solutions. The core of the library is the implementation of seven local search operators that share a similar interface and are designed to be extended to handle additional options with minimal code change. The code is well-documented, is straightforward to compile, and is freely available for download at http://sites.google.com/site/vrphlibrary/ . The distribution of the code contains several applications that can be used to generate solutions to instances of the capacitated VRP.

  5. Deconvolution of fluorescence lifetime imaging microscopy by a library of exponentials

    PubMed Central

    Campos-Delgado, Daniel U.; Navarro, O. Gutierrez; Arce-Santana, E. R.; Walsh, Alex J.; Skala, Melissa C.; Jo, Javier A.

    2015-01-01

    Fluorescence lifetime microscopy imaging (FLIM) is an optic technique that allows a quantitative characterization of the fluorescent components of a sample. However, for an accurate interpretation of FLIM, an initial processing step is required to deconvolve the instrument response of the system from the measured fluorescence decays. In this paper, we present a novel strategy for the deconvolution of FLIM data based on a library of exponentials. Our approach searches for the scaling coefficients of the library by non-negative least squares approximations plus Thikonov/l2 or l1 regularization terms. The parameters of the library are given by the lower and upper bounds in the characteristic lifetimes of the exponential functions and the size of the library, where we observe that this last variable is not a limiting factor in the resulting fitting accuracy. We compare our proposal to nonlinear least squares and global non-linear least squares estimations with a multi-exponential model, and also to constrained Laguerre-base expansions, where we visualize an advantage of our proposal based on Thikonov/l2 regularization in terms of estimation accuracy, computational time, and tuning strategy. Our validation strategy considers synthetic datasets subject to both shot and Gaussian noise and samples with different lifetime maps, and experimental FLIM data of ex-vivo atherosclerotic plaques and human breast cancer cells. PMID:26368470

  6. Development and tuning of an original search engine for patent libraries in medicinal chemistry

    PubMed Central

    2014-01-01

    Background The large increase in the size of patent collections has led to the need of efficient search strategies. But the development of advanced text-mining applications dedicated to patents of the biomedical field remains rare, in particular to address the needs of the pharmaceutical & biotech industry, which intensively uses patent libraries for competitive intelligence and drug development. Methods We describe here the development of an advanced retrieval engine to search information in patent collections in the field of medicinal chemistry. We investigate and combine different strategies and evaluate their respective impact on the performance of the search engine applied to various search tasks, which covers the putatively most frequent search behaviours of intellectual property officers in medical chemistry: 1) a prior art search task; 2) a technical survey task; and 3) a variant of the technical survey task, sometimes called known-item search task, where a single patent is targeted. Results The optimal tuning of our engine resulted in a top-precision of 6.76% for the prior art search task, 23.28% for the technical survey task and 46.02% for the variant of the technical survey task. We observed that co-citation boosting was an appropriate strategy to improve prior art search tasks, while IPC classification of queries was improving retrieval effectiveness for technical survey tasks. Surprisingly, the use of the full body of the patent was always detrimental for search effectiveness. It was also observed that normalizing biomedical entities using curated dictionaries had simply no impact on the search tasks we evaluate. The search engine was finally implemented as a web-application within Novartis Pharma. The application is briefly described in the report. Conclusions We have presented the development of a search engine dedicated to patent search, based on state of the art methods applied to patent corpora. We have shown that a proper tuning of the system to

  7. Searching for Pulsars Using Image Pattern Recognition

    NASA Astrophysics Data System (ADS)

    Zhu, W. W.; Berndsen, A.; Madsen, E. C.; Tan, M.; Stairs, I. H.; Brazier, A.; Lazarus, P.; Lynch, R.; Scholz, P.; Stovall, K.; Ransom, S. M.; Banaszak, S.; Biwer, C. M.; Cohen, S.; Dartez, L. P.; Flanigan, J.; Lunsford, G.; Martinez, J. G.; Mata, A.; Rohr, M.; Walker, A.; Allen, B.; Bhat, N. D. R.; Bogdanov, S.; Camilo, F.; Chatterjee, S.; Cordes, J. M.; Crawford, F.; Deneva, J. S.; Desvignes, G.; Ferdman, R. D.; Freire, P. C. C.; Hessels, J. W. T.; Jenet, F. A.; Kaplan, D. L.; Kaspi, V. M.; Knispel, B.; Lee, K. J.; van Leeuwen, J.; Lyne, A. G.; McLaughlin, M. A.; Siemens, X.; Spitler, L. G.; Venkataraman, A.

    2014-02-01

    In the modern era of big data, many fields of astronomy are generating huge volumes of data, the analysis of which can sometimes be the limiting factor in research. Fortunately, computer scientists have developed powerful data-mining techniques that can be applied to various fields. In this paper, we present a novel artificial intelligence (AI) program that identifies pulsars from recent surveys by using image pattern recognition with deep neural nets—the PICS (Pulsar Image-based Classification System) AI. The AI mimics human experts and distinguishes pulsars from noise and interference by looking for patterns from candidate plots. Different from other pulsar selection programs that search for expected patterns, the PICS AI is taught the salient features of different pulsars from a set of human-labeled candidates through machine learning. The training candidates are collected from the Pulsar Arecibo L-band Feed Array (PALFA) survey. The information from each pulsar candidate is synthesized in four diagnostic plots, which consist of image data with up to thousands of pixels. The AI takes these data from each candidate as its input and uses thousands of such candidates to train its ~9000 neurons. The deep neural networks in this AI system grant it superior ability to recognize various types of pulsars as well as their harmonic signals. The trained AI's performance has been validated with a large set of candidates from a different pulsar survey, the Green Bank North Celestial Cap survey. In this completely independent test, the PICS ranked 264 out of 277 pulsar-related candidates, including all 56 previously known pulsars and 208 of their harmonics, in the top 961 (1%) of 90,008 test candidates, missing only 13 harmonics. The first non-pulsar candidate appears at rank 187, following 45 pulsars and 141 harmonics. In other words, 100% of the pulsars were ranked in the top 1% of all candidates, while 80% were ranked higher than any noise or interference. The

  8. Searching for pulsars using image pattern recognition

    SciTech Connect

    Zhu, W. W.; Berndsen, A.; Madsen, E. C.; Tan, M.; Stairs, I. H.; Brazier, A.; Lazarus, P.; Lynch, R.; Scholz, P.; Stovall, K.; Cohen, S.; Dartez, L. P.; Lunsford, G.; Martinez, J. G.; Mata, A.; Ransom, S. M.; Banaszak, S.; Biwer, C. M.; Flanigan, J.; Rohr, M. E-mail: berndsen@phas.ubc.ca; and others

    2014-02-01

    In the modern era of big data, many fields of astronomy are generating huge volumes of data, the analysis of which can sometimes be the limiting factor in research. Fortunately, computer scientists have developed powerful data-mining techniques that can be applied to various fields. In this paper, we present a novel artificial intelligence (AI) program that identifies pulsars from recent surveys by using image pattern recognition with deep neural nets—the PICS (Pulsar Image-based Classification System) AI. The AI mimics human experts and distinguishes pulsars from noise and interference by looking for patterns from candidate plots. Different from other pulsar selection programs that search for expected patterns, the PICS AI is taught the salient features of different pulsars from a set of human-labeled candidates through machine learning. The training candidates are collected from the Pulsar Arecibo L-band Feed Array (PALFA) survey. The information from each pulsar candidate is synthesized in four diagnostic plots, which consist of image data with up to thousands of pixels. The AI takes these data from each candidate as its input and uses thousands of such candidates to train its ∼9000 neurons. The deep neural networks in this AI system grant it superior ability to recognize various types of pulsars as well as their harmonic signals. The trained AI's performance has been validated with a large set of candidates from a different pulsar survey, the Green Bank North Celestial Cap survey. In this completely independent test, the PICS ranked 264 out of 277 pulsar-related candidates, including all 56 previously known pulsars and 208 of their harmonics, in the top 961 (1%) of 90,008 test candidates, missing only 13 harmonics. The first non-pulsar candidate appears at rank 187, following 45 pulsars and 141 harmonics. In other words, 100% of the pulsars were ranked in the top 1% of all candidates, while 80% were ranked higher than any noise or interference. The

  9. Scanners and drillers: Characterizing expert visual search through volumetric images

    PubMed Central

    Drew, Trafton; Vo, Melissa Le-Hoa; Olwal, Alex; Jacobson, Francine; Seltzer, Steven E.; Wolfe, Jeremy M.

    2013-01-01

    Modern imaging methods like computed tomography (CT) generate 3-D volumes of image data. How do radiologists search through such images? Are certain strategies more efficient? Although there is a large literature devoted to understanding search in 2-D, relatively little is known about search in volumetric space. In recent years, with the ever-increasing popularity of volumetric medical imaging, this question has taken on increased importance as we try to understand, and ultimately reduce, errors in diagnostic radiology. In the current study, we asked 24 radiologists to search chest CTs for lung nodules that could indicate lung cancer. To search, radiologists scrolled up and down through a “stack” of 2-D chest CT “slices.” At each moment, we tracked eye movements in the 2-D image plane and coregistered eye position with the current slice. We used these data to create a 3-D representation of the eye movements through the image volume. Radiologists tended to follow one of two dominant search strategies: “drilling” and “scanning.” Drillers restrict eye movements to a small region of the lung while quickly scrolling through depth. Scanners move more slowly through depth and search an entire level of the lung before moving on to the next level in depth. Driller performance was superior to the scanners on a variety of metrics, including lung nodule detection rate, percentage of the lung covered, and the percentage of search errors where a nodule was never fixated. PMID:23922445

  10. Scanners and drillers: characterizing expert visual search through volumetric images.

    PubMed

    Drew, Trafton; Vo, Melissa Le-Hoa; Olwal, Alex; Jacobson, Francine; Seltzer, Steven E; Wolfe, Jeremy M

    2013-08-06

    Modern imaging methods like computed tomography (CT) generate 3-D volumes of image data. How do radiologists search through such images? Are certain strategies more efficient? Although there is a large literature devoted to understanding search in 2-D, relatively little is known about search in volumetric space. In recent years, with the ever-increasing popularity of volumetric medical imaging, this question has taken on increased importance as we try to understand, and ultimately reduce, errors in diagnostic radiology. In the current study, we asked 24 radiologists to search chest CTs for lung nodules that could indicate lung cancer. To search, radiologists scrolled up and down through a "stack" of 2-D chest CT "slices." At each moment, we tracked eye movements in the 2-D image plane and coregistered eye position with the current slice. We used these data to create a 3-D representation of the eye movements through the image volume. Radiologists tended to follow one of two dominant search strategies: "drilling" and "scanning." Drillers restrict eye movements to a small region of the lung while quickly scrolling through depth. Scanners move more slowly through depth and search an entire level of the lung before moving on to the next level in depth. Driller performance was superior to the scanners on a variety of metrics, including lung nodule detection rate, percentage of the lung covered, and the percentage of search errors where a nodule was never fixated.

  11. Screening of a virtual mirror-image library of natural products.

    PubMed

    Noguchi, Taro; Oishi, Shinya; Honda, Kaori; Kondoh, Yasumitsu; Saito, Tamio; Ohno, Hiroaki; Osada, Hiroyuki; Fujii, Nobutaka

    2016-06-08

    We established a facile access to an unexplored mirror-image library of chiral natural product derivatives using d-protein technology. In this process, two chemical syntheses of mirror-image substances including a target protein and hit compound(s) allow the lead discovery from a virtual mirror-image library without the synthesis of numerous mirror-image compounds.

  12. Development of user-centered interfaces to search the knowledge resources of the Virginia Henderson International Nursing Library.

    PubMed

    Jones, Josette; Harris, Marcelline; Bagley-Thompson, Cheryl; Root, Jane

    2003-01-01

    This poster describes the development of user-centered interfaces in order to extend the functionality of the Virginia Henderson International Nursing Library (VHINL) from library to web based portal to nursing knowledge resources. The existing knowledge structure and computational models are revised and made complementary. Nurses' search behavior is captured and analyzed, and the resulting search models are mapped to the revised knowledge structure and computational model.

  13. Development of User-Centered Interfaces to Search the Knowledge Resources of the Virginia Henderson International Nursing Library

    PubMed Central

    Jones, Josette; Harris, Marcelline; Thompson, Cheryl Bagley; Root, Jane

    2003-01-01

    This poster describes the development of user-centered interfaces in order to extend the functionality of the Virginia Henderson International Nursing Library (VHINL) from library to web based portal to nursing knowledge resources. The existing knowledge structure and computational models are revised and made complementary. Nurses’ search behavior is captured and analyzed, and the resulting search models are mapped to the revised knowledge structure and computational model. PMID:14728389

  14. Building a Digital Library for Multibeam Data, Images and Documents

    NASA Astrophysics Data System (ADS)

    Miller, S. P.; Staudigel, H.; Koppers, A.; Johnson, C.; Cande, S.; Sandwell, D.; Peckman, U.; Becker, J. J.; Helly, J.; Zaslavsky, I.; Schottlaender, B. E.; Starr, S.; Montoya, G.

    2001-12-01

    The Scripps Institution of Oceanography, the UCSD Libraries and the San Diego Supercomputing Center have joined forces to establish a digital library for accessing a wide range of multibeam and marine geophysical data, to a community that ranges from the MGG researcher to K-12 outreach clients. This digital library collection will include 233 multibeam cruises with grids, plots, photographs, station data, technical reports, planning documents and publications, drawn from the holdings of the Geological Data Center and the SIO Archives. Inquiries will be made through an Ocean Exploration Console, reminiscent of a cockpit display where a multitude of data may be displayed individually or in two or three-dimensional projections. These displays will provide access to cruise data as well as global databases such as Global Topography, crustal age, and sediment thickness, thus meeting the day-to-day needs of researchers as well as educators, students, and the public. The prototype contains a few selected expeditions, and a review of the initial approach will be solicited from the user community during the poster session. The search process can be focused by a variety of constraints: geospatial (lat-lon box), temporal (e.g., since 1996), keyword (e.g., cruise, place name, PI, etc.), or expert-level (e.g., K-6 or researcher). The Storage Resource Broker (SRB) software from the SDSC manages the evolving collection as a series of distributed but related archives in various media, from shipboard data through processing and final archiving. The latest version of MB-System provides for the systematic creation of standard metadata, and for the harvesting of metadata from multibeam files. Automated scripts will be used to load the metadata catalog to enable queries with an Oracle database management system. These new efforts to bridge the gap between libraries and data archives are supported by the NSF Information Technology and National Science Digital Library (NSDL) programs

  15. Beyond Failure: Potentially Mitigating Failed Author Searches in the Online Library Catalog through the Use of Linked Data

    ERIC Educational Resources Information Center

    Moulaison, Heather Lea; Stanley, Susan Nicole

    2013-01-01

    Linked data stores house vetted content that can supplement the information available through online library catalogs, potentially mitigating failed author searches if information about the author exists in linked data formats. In this case study, a total of 689 failed author index queries from a large Midwestern academic library's online library…

  16. Image 100 procedures manual development: Applications system library definition and Image 100 software definition

    NASA Technical Reports Server (NTRS)

    Guseman, L. F., Jr.; Decell, H. P., Jr.

    1975-01-01

    An outline for an Image 100 procedures manual for Earth Resources Program image analysis was developed which sets forth guidelines that provide a basis for the preparation and updating of an Image 100 Procedures Manual. The scope of the outline was limited to definition of general features of a procedures manual together with special features of an interactive system. Computer programs were identified which should be implemented as part of an applications oriented library for the system.

  17. Searching for patterns in remote sensing image databases using neural networks

    NASA Technical Reports Server (NTRS)

    Paola, Justin D.; Schowengerdt, Robert A.

    1995-01-01

    We have investigated a method, based on a successful neural network multispectral image classification system, of searching for single patterns in remote sensing databases. While defining the pattern to search for and the feature to be used for that search (spectral, spatial, temporal, etc.) is challenging, a more difficult task is selecting competing patterns to train against the desired pattern. Schemes for competing pattern selection, including random selection and human interpreted selection, are discussed in the context of an example detection of dense urban areas in Landsat Thematic Mapper imagery. When applying the search to multiple images, a simple normalization method can alleviate the problem of inconsistent image calibration. Another potential problem, that of highly compressed data, was found to have a minimal effect on the ability to detect the desired pattern. The neural network algorithm has been implemented using the PVM (Parallel Virtual Machine) library and nearly-optimal speedups have been obtained that help alleviate the long process of searching through imagery.

  18. OLIVER: an online library of images for veterinary education and research.

    PubMed

    McGreevy, Paul; Shaw, Tim; Burn, Daniel; Miller, Nick

    2007-01-01

    As part of a strategic move by the University of Sydney toward increased flexibility in learning, the Faculty of Veterinary Science undertook a number of developments involving Web-based teaching and assessment. OLIVER underpins them by providing a rich, durable repository for learning objects. To integrate Web-based learning, case studies, and didactic presentations for veterinary and animal science students, we established an online library of images and other learning objects for use by academics in the Faculties of Veterinary Science and Agriculture. The objectives of OLIVER were to maximize the use of the faculty's teaching resources by providing a stable archiving facility for graphic images and other multimedia learning objects that allows flexible and precise searching, integrating indexing standards, thesauri, pull-down lists of preferred terms, and linking of objects within cases. OLIVER offers a portable and expandable Web-based shell that facilitates ongoing storage of learning objects in a range of media. Learning objects can be downloaded in common, standardized formats so that they can be easily imported for use in a range of applications, including Microsoft PowerPoint, WebCT, and Microsoft Word. OLIVER now contains more than 9,000 images relating to many facets of veterinary science; these are annotated and supported by search engines that allow rapid access to both images and relevant information. The Web site is easily updated and adapted as required.

  19. Predicting rhesus monkey eye movements during natural-image search.

    PubMed

    Segraves, Mark A; Kuo, Emory; Caddigan, Sara; Berthiaume, Emily A; Kording, Konrad P

    2017-03-01

    There are three prominent factors that can predict human visual-search behavior in natural scenes: the distinctiveness of a location (salience), similarity to the target (relevance), and features of the environment that predict where the object might be (context). We do not currently know how well these factors are able to predict macaque visual search, which matters because it is arguably the most popular model for asking how the brain controls eye movements. Here we trained monkeys to perform the pedestrian search task previously used for human subjects. Salience, relevance, and context models were all predictive of monkey eye fixations and jointly about as precise as for humans. We attempted to disrupt the influence of scene context on search by testing the monkeys with an inverted set of the same images. Surprisingly, the monkeys were able to locate the pedestrian at a rate similar to that for upright images. The best predictions of monkey fixations in searching inverted images were obtained by rotating the results of the model predictions for the original image. The fact that the same models can predict human and monkey search behavior suggests that the monkey can be used as a good model for understanding how the human brain enables natural-scene search.

  20. Predicting rhesus monkey eye movements during natural-image search

    PubMed Central

    Segraves, Mark A.; Kuo, Emory; Caddigan, Sara; Berthiaume, Emily A.; Kording, Konrad P.

    2017-01-01

    There are three prominent factors that can predict human visual-search behavior in natural scenes: the distinctiveness of a location (salience), similarity to the target (relevance), and features of the environment that predict where the object might be (context). We do not currently know how well these factors are able to predict macaque visual search, which matters because it is arguably the most popular model for asking how the brain controls eye movements. Here we trained monkeys to perform the pedestrian search task previously used for human subjects. Salience, relevance, and context models were all predictive of monkey eye fixations and jointly about as precise as for humans. We attempted to disrupt the influence of scene context on search by testing the monkeys with an inverted set of the same images. Surprisingly, the monkeys were able to locate the pedestrian at a rate similar to that for upright images. The best predictions of monkey fixations in searching inverted images were obtained by rotating the results of the model predictions for the original image. The fact that the same models can predict human and monkey search behavior suggests that the monkey can be used as a good model for understanding how the human brain enables natural-scene search. PMID:28355625

  1. Generating "fragment-based virtual library" using pocket similarity search of ligand-receptor complexes.

    PubMed

    Khashan, Raed S

    2015-01-01

    As the number of available ligand-receptor complexes is increasing, researchers are becoming more dedicated to mine these complexes to aid in the drug design and development process. We present free software which is developed as a tool for performing similarity search across ligand-receptor complexes for identifying binding pockets which are similar to that of a target receptor. The search is based on 3D-geometric and chemical similarity of the atoms forming the binding pocket. For each match identified, the ligand's fragment(s) corresponding to that binding pocket are extracted, thus forming a virtual library of fragments (FragVLib) that is useful for structure-based drug design. The program provides a very useful tool to explore available databases.

  2. Advanced Image Search: A Strategy for Creating Presentation Boards

    ERIC Educational Resources Information Center

    Frey, Diane K.; Hines, Jean D.; Swinker, Mary E.

    2008-01-01

    Finding relevant digital images to create presentation boards requires advanced search skills. This article describes a course assignment involving a technique designed to develop students' literacy skills with respect to locating images of desired quality and content from Internet databases. The assignment was applied in a collegiate apparel…

  3. The Library in Your Toolbar: You Can Make It Easy to Search Library Resources from Your Own Browser

    ERIC Educational Resources Information Center

    Webster, Peter

    2007-01-01

    For years, patrons have been able to access library services from home and in the library building, but in the world of Google, Yahoo, YouTube, MySpace, and Facebook, library web sites and catalogs are too often not the first place people go to look for information. The innovative use of toolbars could change this. Toolbars have been popular for…

  4. Target image search using fMRI signals

    NASA Astrophysics Data System (ADS)

    Xiong, Shi; Song, Sutao; Zhan, Yu; Zhang, Jiacai

    2014-03-01

    Recent neural signal decoding studies based on functional magnetic resonance imaging (fMRI) have identified the specific image presenting to the subject from a set of potential images, and some studies extend neural decoding into image reconstruction, i.e. image contents that the subject perceived were decoded from the fMRI signals recorded during the subject looking at images. In this paper, we decoded the target images using fMRI signals and described a target image searching method based on the relationship between target image stimuli and fMRI activity. We recorded fMRI data during a serial visual stimuli image presentation task, some of the stimuli images were target images and the rest images were non-target ones. Our fMRI data analysis results showed that in the serial visual presentation task, target images elicited a stereotypical response in the fMRI, which can be detected by multi-voxel pattern analysis (MVPA). Classifiers designed with support vector machine (SVM) used this response to decipher target images from non-target images. The leave-one-run-out cross-validation showed that we can pick out the target images with a possibility far above the chance level, which indicate that there's a neural signatures correlated with the target image recognition process in the human systems.

  5. Library+

    ERIC Educational Resources Information Center

    Merrill, Alex

    2011-01-01

    This article discusses possible future directions for academic libraries in the post Web/Library 2.0 world. These possible directions include areas such as data literacy, linked data sets, and opportunities for libraries in support of digital humanities. The author provides a brief sketch of the background information regarding the topics and…

  6. Computational assessment of visual search strategies in volumetric medical images

    PubMed Central

    Wen, Gezheng; Aizenman, Avigael; Drew, Trafton; Wolfe, Jeremy M.; Haygood, Tamara Miner; Markey, Mia K.

    2016-01-01

    Abstract. When searching through volumetric images [e.g., computed tomography (CT)], radiologists appear to use two different search strategies: “drilling” (restrict eye movements to a small region of the image while quickly scrolling through slices), or “scanning” (search over large areas at a given depth before moving on to the next slice). To computationally identify the type of image information that is used in these two strategies, 23 naïve observers were instructed with either “drilling” or “scanning” when searching for target T’s in 20 volumes of faux lung CTs. We computed saliency maps using both classical two-dimensional (2-D) saliency, and a three-dimensional (3-D) dynamic saliency that captures the characteristics of scrolling through slices. Comparing observers’ gaze distributions with the saliency maps showed that search strategy alters the type of saliency that attracts fixations. Drillers’ fixations aligned better with dynamic saliency and scanners with 2-D saliency. The computed saliency was greater for detected targets than for missed targets. Similar results were observed in data from 19 radiologists who searched five stacks of clinical chest CTs for lung nodules. Dynamic saliency may be superior to the 2-D saliency for detecting targets embedded in volumetric images, and thus “drilling” may be more efficient than “scanning.” PMID:26759815

  7. Epsilon-Q: An Automated Analyzer Interface for Mass Spectral Library Search and Label-Free Protein Quantification.

    PubMed

    Cho, Jin-Young; Lee, Hyoung-Joo; Jeong, Seul-Ki; Paik, Young-Ki

    2017-04-04

    Mass spectrometry (MS) is a widely used proteome analysis tool for biomedical science. In an MS-based bottom-up proteomic approach to protein identification, sequence database (DB) searching has been routinely used because of its simplicity and convenience. However, searching a sequence DB with multiple variable modification options can increase processing time, false-positive errors in large and complicated MS data sets. Spectral library searching is an alternative solution, avoiding the limitations of sequence DB searching and allowing the detection of more peptides with high sensitivity. Unfortunately, this technique has less proteome coverage, resulting in limitations in the detection of novel and whole peptide sequences in biological samples. To solve these problems, we previously developed the "Combo-Spec Search" method, which uses manually multiple references and simulated spectral library searching to analyze whole proteomes in a biological sample. In this study, we have developed a new analytical interface tool called "Epsilon-Q" to enhance the functions of both the Combo-Spec Search method and label-free protein quantification. Epsilon-Q performs automatically multiple spectral library searching, class-specific false-discovery rate control, and result integration. It has a user-friendly graphical interface and demonstrates good performance in identifying and quantifying proteins by supporting standard MS data formats and spectrum-to-spectrum matching powered by SpectraST. Furthermore, when the Epsilon-Q interface is combined with the Combo-Spec search method, called the Epsilon-Q system, it shows a synergistic function by outperforming other sequence DB search engines for identifying and quantifying low-abundance proteins in biological samples. The Epsilon-Q system can be a versatile tool for comparative proteome analysis based on multiple spectral libraries and label-free quantification.

  8. Finding corners in images by foveated search

    NASA Astrophysics Data System (ADS)

    Arnow, Thomas L.; Bovik, Alan C.

    2006-01-01

    We develop a new approach to finding corners in images that combines foveated edge detection and curvature calculation with saccadic placement of foveal fixations. Each saccade moves the fovea to a location of high curvature combined with high edge gradient. Edges are located using a foveated Canny edge detector with spatial constant that increases with eccentricity. Next, we calculate a measure of local corner strength, based on a product of curvature and gradient. An inhibition factor based on previous visits to a region of the image prevents the system from repeatedly returning to the same locale. A long saccade is move thes fovea to previously unexplored areas of the image. Subsequent short saccades improve the accuracy of the location of the corner approximated by the long saccade. The system is tested on two natural scenes and the results compared against subjects observing the same test images through an eyetracker. Results show that the algorithm is a good locator of corners.

  9. The RightPages Service: An Image-Based Electronic Library.

    ERIC Educational Resources Information Center

    Hoffman, Melia M.; And Others

    1993-01-01

    Describes The RightPages Service developed by AT&T Bell Laboratories library and computer researchers to enable AT&T employees to access the library from their workstations. The service incorporates ASCII text, bitmap images, and an alerting service. Copyright issues, user interface, image and text processing procedures, results, and…

  10. High Res at High Speed: Automated Delivery of High-Resolution Images from Digital Library Collections

    ERIC Educational Resources Information Center

    Westbrook, R. Niccole; Watkins, Sean

    2012-01-01

    As primary source materials in the library are digitized and made available online, the focus of related library services is shifting to include new and innovative methods of digital delivery via social media, digital storytelling, and community-based and consortial image repositories. Most images on the Web are not of sufficient quality for most…

  11. Design of combinatorial libraries for the exploration of virtual hits from fragment space searches with LoFT.

    PubMed

    Lessel, Uta; Wellenzohn, Bernd; Fischer, J Robert; Rarey, Matthias

    2012-02-27

    A case study is presented illustrating the design of a focused CDK2 library. The scaffold of the library was detected by a feature trees search in a fragment space based on reactions from combinatorial chemistry. For the design the software LoFT (Library optimizer using Feature Trees) was used. The special feature called FTMatch was applied to restrict the parts of the queries where the reagents are permitted to match. This way a 3D scoring function could be simulated. Results were compared with alternative designs by GOLD docking and ROCS 3D alignments.

  12. Optical-digital hybrid image search system in cloud environment

    NASA Astrophysics Data System (ADS)

    Ikeda, Kanami; Kodate, Kashiko; Watanabe, Eriko

    2016-09-01

    To improve the versatility and usability of optical correlators, we developed an optical-digital hybrid image search system consisting of digital servers and an optical correlator that can be used to perform image searches in the cloud environment via a web browser. This hybrid system employs a simple method to obtain correlation signals and has a distributed network design. The correlation signals are acquired by using an encoder timing signal generated by a rotating disk, and the distributed network design facilitates the replacement and combination of the digital correlation server and the optical correlator.

  13. ERP component analysis for rapid image searching in finer categories.

    PubMed

    Xiao, Siyuan; Cai, Bangyu; Jiang, Lei; Wang, Yiweng; Chen, Weidong; Zheng, Xiaoxiang

    2013-01-01

    Event-related potentials (ERP)-based image triage (or search) in the context of Rapid Serial Visual Presentation (RSVP) exploits difference in the human brain response to target and distracted stimuli in the form of an image. So far, most paradigms focus on image triage (or search) among rough object categories. In this paper, we explored the possibility and effectiveness of target detection among finer categories like different animals. We analyzed on the difference of ERP components in two image search tasks, a simple-recognition task in which all images of a target are the same and a discriminative-recognition task in which all images are randomly different but belong to the same target category (the same kind of animal). We observed that the P3 amplitude reduced and the P3 latency delayed on the discriminative-recognition condition due to the increased difficulty of identifying different images belonging to the same category. But the average area under ROC curve reached 0.82 which indicated that rapid target detection among finer categories by single-trial ERP were feasible with trivial contribution of N1 and stable contribution of N2 and P3.

  14. Relevance Preserving Projection and Ranking for Web Image Search Reranking.

    PubMed

    Ji, Zhong; Pang, Yanwei; Li, Xuelong

    2015-11-01

    An image search reranking (ISR) technique aims at refining text-based search results by mining images' visual content. Feature extraction and ranking function design are two key steps in ISR. Inspired by the idea of hypersphere in one-class classification, this paper proposes a feature extraction algorithm named hypersphere-based relevance preserving projection (HRPP) and a ranking function called hypersphere-based rank (H-Rank). Specifically, an HRPP is a spectral embedding algorithm to transform an original high-dimensional feature space into an intrinsically low-dimensional hypersphere space by preserving the manifold structure and a relevance relationship among the images. An H-Rank is a simple but effective ranking algorithm to sort the images by their distances to the hypersphere center. Moreover, to capture the user's intent with minimum human interaction, a reversed k-nearest neighbor (KNN) algorithm is proposed, which harvests enough pseudorelevant images by requiring that the user gives only one click on the initially searched images. The HRPP method with reversed KNN is named one-click-based HRPP (OC-HRPP). Finally, an OC-HRPP algorithm and the H-Rank algorithm form a new ISR method, H-reranking. Extensive experimental results on three large real-world data sets show that the proposed algorithms are effective. Moreover, the fact that only one relevant image is required to be labeled makes it has a strong practical significance.

  15. Image superresolution of cytology images using wavelet based patch search

    NASA Astrophysics Data System (ADS)

    Vargas, Carlos; García-Arteaga, Juan D.; Romero, Eduardo

    2015-01-01

    Telecytology is a new research area that holds the potential of significantly reducing the number of deaths due to cervical cancer in developing countries. This work presents a novel super-resolution technique that couples high and low frequency information in order to reduce the bandwidth consumption of cervical image transmission. The proposed approach starts by decomposing into wavelets the high resolution images and transmitting only the lower frequency coefficients. The transmitted coefficients are used to reconstruct an image of the original size. Additional details are added by iteratively replacing patches of the wavelet reconstructed image with equivalent high resolution patches from a previously acquired image database. Finally, the original transmitted low frequency coefficients are used to correct the final image. Results show a higher signal to noise ratio in the proposed method over simply discarding high frequency wavelet coefficients or replacing directly down-sampled patches from the image-database.

  16. Searching near-replicas of images via clustering

    NASA Astrophysics Data System (ADS)

    Chang, Edward Y.; Li, Chen; Wang, James Z.; Mork, Peter; Wiederhold, Gio

    1999-08-01

    Internet piracy has been one of the major concerns for Web publishing. In this study we present a system, RIME, that we have prototyped for detecting unauthorized image copying on the WWW. To speed up the copy detection, RIME uses a new clustering/hashing approach that first clusters similar images on adjacent disk cylinders and then builds indexes to access the clusters made in this way. Searching for the replicas of an image often takes just one IO to loop up the location of the cluster containing similar objects and one sequential file IO to read in this cluster. Our experimental results show that RIME can detect images copies both more efficiently and effectively than the traditional content- based image retrieval systems that use tree-like structures to index images. In addition, RIME copes well with image format conversion, resampling, requantization and geometric transformation.

  17. Hard x ray imaging graphics development and literature search

    NASA Technical Reports Server (NTRS)

    Emslie, A. Gordon

    1991-01-01

    This report presents work performed between June 1990 and June 1991 and has the following objectives: (1) a comprehensive literature search of imaging technology and coded aperture imaging as well as relevant topics relating to solar flares; (2) an analysis of random number generators; and (3) programming simulation models of hard x ray telescopes. All programs are compatible with NASA/MSFC Space Science LAboratory VAX Cluster and are written in VAX FORTRAN and VAX IDL (Interactive Data Language).

  18. On-Line Computer Literature Searching in the Small-To-Medium Size Research Library. A Comparison of Results in 1973 and 1974 Periods.

    ERIC Educational Resources Information Center

    Linepensel, Kenneth C.

    The experience of the research library of International Flavors and Fragrances using on-line data bases is described. On-line searches of Chemical Abstracts condensates and other data bases are compared with the library's previous experience with manual indexes. Two tables show the number of literature searches conducted and the time required.…

  19. Feasibility of LC/TOFMS and elemental database searching as a spectral library for pesticides in food.

    PubMed

    Thurman, E Michael; Ferrer, Imma; Malato, Octavio; Fernández-Alba, Amadeo Rodriguez

    2006-11-01

    Traditionally, the screening of unknown pesticides in food has been accomplished by GC/MS methods using conventional library-searching routines. However, many of the new polar and thermally labile pesticides are more readily and easily analysed by LC/MS methods and no searchable libraries currently exist (with the exception of some user libraries, which are limited). Therefore, there is a need for LC/MS libraries that can detect pesticides and their degradation products. This paper reports an identification scheme using a combination of LC/MS time-of-flight (accurate mass) and an Access database of 350 pesticides that are amenable to positive ion electrospray. The approach differs from conventional library searching of fragment ions. The concept consists of three parts: (1) initial screening of possible pesticides in actual market-place fruit extracts (apple and orange) using accurate mass and generating an accurate mass via an automatic ion-extraction routine, (2) searching the Access database manually for screening identification of a pesticide, and (3) identification of the suspected compound by accurate mass of at least one fragment ion and comparison of retention time with an actual standard. Imazalil and iprodione were identified in apples and thiabendazole in oranges using this database approach.

  20. Action Properties of Object Images Facilitate Visual Search.

    PubMed

    Gomez, Michael A; Snow, Jacqueline C

    2017-03-06

    There is mounting evidence that constraints from action can influence the early stages of object selection, even in the absence of any explicit preparation for action. Here, we examined whether action properties of images can influence visual search, and whether such effects were modulated by hand preference. Observers searched for an oddball target among 3 distractors. The search arrays consisted either of images of graspable "handles" ("action-related" stimuli), or images that were otherwise identical to the handles but in which the semicircular fulcrum element was reoriented so that the stimuli no longer looked like graspable objects ("non-action-related" stimuli). In Experiment 1, right-handed observers, who have been shown previously to prefer to use the right hand over the left for manual tasks, were faster to detect targets in action-related versus non-action-related arrays, and showed a response time (reaction time [RT]) advantage for rightward- versus leftward-oriented action-related handles. In Experiment 2, left-handed observers, who have been shown to use the left and right hands relatively equally in manual tasks, were also faster to detect targets in the action-related versus non-action-related arrays, but RTs were equally fast for rightward- and leftward-oriented handle targets. Together, or results suggest that action properties in images, and constraints for action imposed by preferences for manual interaction with objects, can influence attentional selection in the context of visual search. (PsycINFO Database Record

  1. The Use of OPAC in a Large Academic Library: A Transactional Log Analysis Study of Subject Searching

    ERIC Educational Resources Information Center

    Villen-Rueda, Luis; Senso, Jose A.; de Moya-Anegon, Felix

    2007-01-01

    The analysis of user searches in catalogs has been the topic of research for over four decades, involving numerous studies and diverse methodologies. The present study looks at how different types of users effect queries in the catalog of a university library. For this purpose, we analyzed log files to determine which was the most frequent type of…

  2. Information Retrieval Techniques: The Differences in Cognitive Strategies and Search Behaviors among Graduate Students in an Academic Library.

    ERIC Educational Resources Information Center

    Simon, Charlotte E.

    Graduate schools have been admitting more and more students older than the "traditional" 18- to 24-year-old campus population. These adult learners may come to their programs of study without formal training in library use in general or literature searches in particular. By examining various successful and unsuccessful strategies used by…

  3. Newborn Screening: National Library of Medicine Literature Search, January 1980 through March 1987. No. 87-2.

    ERIC Educational Resources Information Center

    Patrias, Karen

    This bibliography, prepared by the National Library of Medicine through a literature search of its online databases, covers all aspects of newborn screening. It includes references to screening for: inborn errors of metabolism, such as phenylketonuria and galactosemia; hemoglobinopathies, particularly sickle cell disease; congenital hypothyroidism…

  4. Paths of Discovery: Comparing the Search Effectiveness of EBSCO Discovery Service, Summon, Google Scholar, and Conventional Library Resources

    ERIC Educational Resources Information Center

    Asher, Andrew D.; Duke, Lynda M.; Wilson, Suzanne

    2013-01-01

    In 2011, researchers at Bucknell University and Illinois Wesleyan University compared the search efficacy of Serial Solutions Summon, EBSCO Discovery Service, Google Scholar, and conventional library databases. Using a mixed-methods approach, qualitative and quantitative data were gathered on students' usage of these tools. Regardless of the…

  5. A Kind of Transformation of Information Service--Science and Technology Novelty Search in Chinese University Libraries

    ERIC Educational Resources Information Center

    Aiguo, Li

    2007-01-01

    Science and Technology Novelty Search (S&TNS) is a special information consultation service developed as part of the Chinese Sci-Tech system. The author introduces the concept of S&TNS, and explains its role, and the role of the university library in the process. A quality control model to improve the quality of service of the S&TNS at…

  6. Internet Access to National Library of Medicine SDI Search Results: The Benefits of Locally Written Software for Automated Postprocessing.

    ERIC Educational Resources Information Center

    Watson, Michael; And Others

    1997-01-01

    Library staff at Louisiana State University Medical Center in Shreveport have written two computer programs automating much of its selective dissemination of information (SDI) postprocessing. The software sorts SDI results, gathers and reports statistical data without requiring manual data entry, allows delivery of search results as hard copy or…

  7. Safe storage and multi-modal search for medical images.

    PubMed

    Kommeri, Jukka; Niinimäki, Marko; Müller, Henning

    2011-01-01

    Modern hospitals produce enormous amounts of data in all departments, from images, to lab results, medication use, and release letters. Since several years these data are most often produced in digital form, making them accessible for researchers to optimize the outcome of care process and analyze all available data across patients. The Geneva University Hospitals (HUG) are no exception with its daily radiology department's output of over 140'000 images in 2010, with a majority of them being tomographic slices. In this paper we introduce tools for uploading and accessing DICOM images and associated metadata in a secure Grid storage. These data are made available for authorized persons using a Grid security framework, as security is a main problem in secondary use of image data, where images are to be stored outside of the clinical image archive. Our tool combines the security and metadata access of a Grid middleware with the visual search that uses GIFT.

  8. The Convergence of Information Technology, Data, and Management in a Library Imaging Program

    ERIC Educational Resources Information Center

    France, Fenella G.; Emery, Doug; Toth, Michael B.

    2010-01-01

    Integrating advanced imaging and processing capabilities in libraries, archives, and museums requires effective systems and information management to ensure that the large amounts of digital data about cultural artifacts can be readily acquired, stored, archived, accessed, processed, and linked to other data. The Library of Congress is developing…

  9. The Sci/Tech Image Invasion: Approaches to Managing the Digital Library.

    ERIC Educational Resources Information Center

    Schwarzwalder, Robert

    1995-01-01

    Discusses the networking of image-based libraries of scientific and technical documents and the role of information professionals in the future of libraries and information access. Topics include commercial databanks, projects involving cooperation between technical publishers and universities, and the Internet and World Wide Web. (LRW)

  10. Gender Images in Library Publications: Is a Picture Worth a Thousand Words?

    ERIC Educational Resources Information Center

    Carle, Daria O.; Anthes, Susan H.

    1999-01-01

    Visual images of gender from five years of three library publications were examined. Results, charted in five figures, are discussed in terms of journal covers, entire issues, text, advertisements, number of professional librarians, and academic versus general libraries. Findings show that women are visually underrepresented. (AEF)

  11. Searching for the limit of image quality in film radiography

    SciTech Connect

    Vaessen, B.; Perdieus, P.; Florens, R.

    1993-12-31

    Radiographic film image quality in general was, and in most cases still is, considered as a very subjective and rather vague parameter. Yet it is of vital importance to the NDT and related quality control and quality assurance industry. Therefore, lately Agfa has put a major effort into quantifying image quality in an objective, measurable way. It was in the framework of this optimization project, that the authors, based on these new insights in imaging of industrial film systems, strived to search for the limit of the highest achievable image quality. In this paper they report these results. They not only report these results in an academic way, meaning how this highest image quality can be achieved under lab conditions, but also how these same results can be obtained under practical e.g. field-conditions.

  12. Library Media Specialists and Spirituality in Schools: Native American Images as a Beginning.

    ERIC Educational Resources Information Center

    Barron, Daniel D.

    2002-01-01

    Discussion of spirituality in schools focuses on Native American images, especially as used for school mascots and product marketing. Includes various resources, both electronic and printed, that are helpful to school library media specialists as well as other educators. (LRW)

  13. Development of a Reference Image Collection Library for Histopathology Image Processing, Analysis and Decision Support Systems Research.

    PubMed

    Kostopoulos, Spiros; Ravazoula, Panagiota; Asvestas, Pantelis; Kalatzis, Ioannis; Xenogiannopoulos, George; Cavouras, Dionisis; Glotsos, Dimitris

    2017-01-12

    Histopathology image processing, analysis and computer-aided diagnosis have been shown as effective assisting tools towards reliable and intra-/inter-observer invariant decisions in traditional pathology. Especially for cancer patients, decisions need to be as accurate as possible in order to increase the probability of optimal treatment planning. In this study, we propose a new image collection library (HICL-Histology Image Collection Library) comprising 3831 histological images of three different diseases, for fostering research in histopathology image processing, analysis and computer-aided diagnosis. Raw data comprised 93, 116 and 55 cases of brain, breast and laryngeal cancer respectively collected from the archives of the University Hospital of Patras, Greece. The 3831 images were generated from the most representative regions of the pathology, specified by an experienced histopathologist. The HICL Image Collection is free for access under an academic license at http://medisp.bme.teiath.gr/hicl/ . Potential exploitations of the proposed library may span over a board spectrum, such as in image processing to improve visualization, in segmentation for nuclei detection, in decision support systems for second opinion consultations, in statistical analysis for investigation of potential correlations between clinical annotations and imaging findings and, generally, in fostering research on histopathology image processing and analysis. To the best of our knowledge, the HICL constitutes the first attempt towards creation of a reference image collection library in the field of traditional histopathology, publicly and freely available to the scientific community.

  14. Full Elastic Waveform Search Engine for Near Surface Imaging

    NASA Astrophysics Data System (ADS)

    Zhang, J.; Zhang, X.

    2014-12-01

    For processing land seismic data, the near-surface problem is often very complex and may severely affect our capability to image the subsurface. The current state-of-the-art technology for near surface imaging is the early arrival waveform inversion that solves an acoustic wave-equation problem. However, fitting land seismic data with acoustic wavefield is sometimes invalid. On the other hand, performing elastic waveform inversion is very time-consuming. Similar to a web search engine, we develop a full elastic waveform search engine that includes a large database with synthetic elastic waveforms accounting for a wide range of interval velocity models in the CMP domain. With each CMP gather of real data as an entry, the search engine applies Multiple-Randomized K-Dimensional (MRKD) tree method to find approximate best matches to the entry in about a second. Interpolation of the velocity models at CMP positions creates 2D or 3D Vp, Vs, and density models for the near surface area. The method does not just return one solution; it gives a series of best matches in a solution space. Therefore, the results can help us to examine the resolution and nonuniqueness of the final solution. Further, this full waveform search method can avoid the issues of initial model and cycle skipping that the method of full waveform inversion is difficult to deal with.

  15. Evidential significance of automotive paint trace evidence using a pattern recognition based infrared library search engine for the Paint Data Query Forensic Database.

    PubMed

    Lavine, Barry K; White, Collin G; Allen, Matthew D; Fasasi, Ayuba; Weakley, Andrew

    2016-10-01

    A prototype library search engine has been further developed to search the infrared spectral libraries of the paint data query database to identify the line and model of a vehicle from the clear coat, surfacer-primer, and e-coat layers of an intact paint chip. For this study, search prefilters were developed from 1181 automotive paint systems spanning 3 manufacturers: General Motors, Chrysler, and Ford. The best match between each unknown and the spectra in the hit list generated by the search prefilters was identified using a cross-correlation library search algorithm that performed both a forward and backward search. In the forward search, spectra were divided into intervals and further subdivided into windows (which corresponds to the time lag for the comparison) within those intervals. The top five hits identified in each search window were compiled; a histogram was computed that summarized the frequency of occurrence for each library sample, with the IR spectra most similar to the unknown flagged. The backward search computed the frequency and occurrence of each line and model without regard to the identity of the individual spectra. Only those lines and models with a frequency of occurrence greater than or equal to 20% were included in the final hit list. If there was agreement between the forward and backward search results, the specific line and model common to both hit lists was always the correct assignment. Samples assigned to the same line and model by both searches are always well represented in the library and correlate well on an individual basis to specific library samples. For these samples, one can have confidence in the accuracy of the match. This was not the case for the results obtained using commercial library search algorithms, as the hit quality index scores for the top twenty hits were always greater than 99%.

  16. Searching for Images: The Analysis of Users' Queries for Image Retrieval in American History.

    ERIC Educational Resources Information Center

    Choi, Youngok; Rasmussen, Edie M.

    2003-01-01

    Studied users' queries for visual information in American history to identify the image attributes important for retrieval and the characteristics of users' queries for digital images, based on queries from 38 faculty and graduate students. Results of pre- and post-test questionnaires and interviews suggest principle categories of search terms.…

  17. A rational workflow for sequential virtual screening of chemical libraries on searching for new tyrosinase inhibitors.

    PubMed

    Le-Thi-Thu, Huong; Casanola-Martín, Gerardo M; Marrero-Ponce, Yovani; Rescigno, Antonio; Abad, Concepcion; Khan, Mahmud Tareq Hassan

    2014-01-01

    The tyrosinase is a bifunctional, copper-containing enzyme widely distributed in the phylogenetic tree. This enzyme is involved in the production of melanin and some other pigments in humans, animals and plants, including skin pigmentations in mammals, and browning process in plants and vegetables. Therefore, enzyme inhibitors has been under the attention of the scientist community, due to its broad applications in food, cosmetic, agricultural and medicinal fields, to avoid the undesirable effects of abnormal melanin overproduction. However, the research of novel chemical with antityrosinase activity demands the use of more efficient tools to speed up the tyrosinase inhibitors discovery process. This chapter is focused in the different components of a predictive modeling workflow for the identification and prioritization of potential new compounds with activity against the tyrosinase enzyme. In this case, two structure chemical libraries Spectrum Collection and Drugbank are used in this attempt to combine different virtual screening data mining techniques, in a sequential manner helping to avoid the usually expensive and time consuming traditional methods. Some of the sequential steps summarize here comprise the use of drug-likeness filters, similarity searching, classification and potency QSAR multiclassifier systems, modeling molecular interactions systems, and similarity/diversity analysis. Finally, the methodologies showed here provide a rational workflow for virtual screening hit analysis and selection as a promissory drug discovery strategy for use in target identification phase.

  18. Embedding based on function approximation for large scale image search.

    PubMed

    Do, Thanh-Toan; Cheung, Ngai-Man

    2017-03-23

    The objective of this paper is to design an embedding method that maps local features describing an image (e.g. SIFT) to a higher dimensional representation useful for the image retrieval problem. First, motivated by the relationship between the linear approximation of a nonlinear function in high dimensional space and the stateof- the-art feature representation used in image retrieval, i.e., VLAD, we propose a new approach for the approximation. The embedded vectors resulted by the function approximation process are then aggregated to form a single representation for image retrieval. Second, in order to make the proposed embedding method applicable to large scale problem, we further derive its fast version in which the embedded vectors can be efficiently computed, i.e., in the closed-form. We compare the proposed embedding methods with the state of the art in the context of image search under various settings: when the images are represented by medium length vectors, short vectors, or binary vectors. The experimental results show that the proposed embedding methods outperform existing the state of the art on the standard public image retrieval benchmarks.

  19. The Use of Computers in Literature Searching and Related Reference Activities in Libraries. Proceedings of the 1975 Clinic on Library Applications of Data Processing (Champaign, Illinois, April 27-30, 1975).

    ERIC Educational Resources Information Center

    Lancaster, F. Wilfrid, Ed.

    Twelve papers from the Twelfth Annual Clinic on Library Applications of Data Processing are presented here. Following an introductory paper are two articles on data bases and information sources. The fourth article discusses computer-aided information retrieval in an industrial library. Bibliographic searches is the topic of the fifth article, and…

  20. Java Library for Input and Output of Image Data and Metadata

    NASA Technical Reports Server (NTRS)

    Deen, Robert; Levoe, Steven

    2003-01-01

    A Java-language library supports input and output (I/O) of image data and metadata (label data) in the format of the Video Image Communication and Retrieval (VICAR) image-processing software and in several similar formats, including a subset of the Planetary Data System (PDS) image file format. The library does the following: It provides low-level, direct access layer, enabling an application subprogram to read and write specific image files, lines, or pixels, and manipulate metadata directly. Two coding/decoding subprograms ("codecs" for short) based on the Java Advanced Imaging (JAI) software provide access to VICAR and PDS images in a file-format-independent manner. The VICAR and PDS codecs enable any program that conforms to the specification of the JAI codec to use VICAR or PDS images automatically, without specific knowledge of the VICAR or PDS format. The library also includes Image I/O plugin subprograms for VICAR and PDS formats. Application programs that conform to the Image I/O specification of Java version 1.4 can utilize any image format for which such a plug-in subprogram exists, without specific knowledge of the format itself. Like the aforementioned codecs, the VICAR and PDS Image I/O plug-in subprograms support reading and writing of metadata.

  1. Minnesota Zoological Garden Library.

    ERIC Educational Resources Information Center

    Norell, Angela

    1988-01-01

    Describes the history and functions of the Minnesota Zoological Garden library. Topics covered include the library collections; library services, including online search capabilities; and the various groups of users served by the library. (three references) (CLB)

  2. The library without walls: images, medical dictionaries, atlases, medical encyclopedias free on web.

    PubMed

    Giglia, E

    2008-09-01

    The aim of this article was to present the ''reference room'' of the Internet, a real library without walls. The reader will find medical encyclopedias, dictionaries, atlases, e-books, images, and will also learn something useful about the use and reuse of images in a text and in a web site, according to the copyright law.

  3. Remotely sensed image processing service composition based on heuristic search

    NASA Astrophysics Data System (ADS)

    Yang, Xiaoxia; Zhu, Qing; Li, Hai-feng; Zhao, Wen-hao

    2008-12-01

    As remote sensing technology become ever more powerful with multi-platform and multi-sensor, it has been widely recognized for contributing to geospatial information efforts. Because the remotely sensed image processing demands large-scale, collaborative processing and massive storage capabilities to satisfy the increasing demands of various applications, the effect and efficiency of the remotely sensed image processing is far from the user's expectation. The emergence of Service Oriented Architecture (SOA) may make this challenge manageable. It encapsulate all processing function into services and recombine them with service chain. The service composition on demand has become a hot topic. Aiming at the success rate, quality and efficiency of processing service composition for remote sensing application, a remote sensed image processing service composition method is proposed in this paper. It composes services for a user requirement through two steps: 1) dynamically constructs a complete service dependency graph for user requirement on-line; 2) AO* based heuristic searches for optimal valid path in service dependency graph. These services within the service dependency graph are considered relevant to the specific request, instead of overall registered services. The second step, heuristic search is a promising approach for automated planning. Starting with the initial state, AO* uses a heuristic function to select states until the user requirement is reached. Experimental results show that this method has a good performance even the repository has a large number of processing services.

  4. Rebels in search of champions: Envisioning the library of the future

    SciTech Connect

    Moulik, A.; Lai, D.

    1991-06-21

    The traditional role of librarians to secure and provide access to the archives of recorded knowledge is being rapidly challenged on three fronts: the increasing technical sophistication of library users, the wide availability of information management software, and economic pressures on the growth of library collections. While we may argue endlessly about turf'' and ownership'', the real challenge is to forge a new ethic of librarianship which defies the stereotype of the passive provider of information services, explores new models of partnership with users, and champions an interactive environment in which to create the library of the future. The Main Library at Lawrence Livermore National Laboratory is actively engaged in testing experimental models of the library of the future, centered on dynamic user-librarian interactions, versatile information technologies, and on forecasting creative partnerships with library users in different environments. These experiments are described, evaluated, and their implications for future development are explored. 39 refs.

  5. The Small Academic Library and Its Encounter with Technology: A Study of the Use of Online Searching and CD-ROM Technology in Small Private Colleges in Illinois.

    ERIC Educational Resources Information Center

    Selbert, Daphne

    This examination of the impact of technology on the educational role of small academic libraries focuses on the information access aspect of technology. Librarians at 26 colleges in Illinois with enrollments of under 3,000 students responded to a survey which measured the libraries' access to databases through online searching and the use of…

  6. Image Content Engine (ICE): A System for Fast Image Database Searches

    SciTech Connect

    Brase, J M; Paglieroni, D W; Weinert, G F; Grant, C W; Lopez, A S; Nikolaev, S

    2005-03-22

    The Image Content Engine (ICE) is being developed to provide cueing assistance to human image analysts faced with increasingly large and intractable amounts of image data. The ICE architecture includes user configurable feature extraction pipelines which produce intermediate feature vector and match surface files which can then be accessed by interactive relational queries. Application of the feature extraction algorithms to large collections of images may be extremely time consuming and is launched as a batch job on a Linux cluster. The query interface accesses only the intermediate files and returns candidate hits nearly instantaneously. Queries may be posed for individual objects or collections. The query interface prompts the user for feedback, and applies relevance feedback algorithms to revise the feature vector weighting and focus on relevant search results. Examples of feature extraction and both model-based and search-by-example queries are presented.

  7. Status and Future Directions of Online Search Services in Georgia Academic Libraries.

    ERIC Educational Resources Information Center

    Mosby, Anne Page; McKinney, Gayle

    This study evolved from a survey of all academic libraries in Georgia, designed to identify current online activities in the state's academic libraries, and to predict future directions and trends. The information was gathered to provide a pool of data for comparison, planning, management, and administration of online services, and to serve as a…

  8. In Search of Facilitating Citizens' Problem Solving: Public Libraries' Collaborative Development of Services with Related Organizations

    ERIC Educational Resources Information Center

    Ikeya, Nozomi; Tamura, Shunsaku; Miwa, Makiko; Koshizuka, Mika; Saito, Seiichi; Kasai, Yumiko

    2011-01-01

    Introduction: The paper attempts to understand value constellations in organising and using the business information service that was recently developed by various stakeholders with libraries who were in pursuit of supporting people's problem solving in Japanese public libraries. Method: In-depth interviews were conducted not only with users and…

  9. Texas A & M University Library. A Final Report from the Public Services Research Projects. A Comparison of Two End User Operated Search Systems. One of a Series of Self-Studies and Research Projects.

    ERIC Educational Resources Information Center

    Dodd, Jane; And Others

    This report summarizes research undertaken at the Sterling C. Evans Library, Texas A & M University to assess the impact that end user information retrieval systems may have on library staff and users. Two systems, BRS/After Dark and Search Helper, were made available in the library for end user searching at no cost. A total of 260 users…

  10. HSI-Find: A Visualization and Search Service for Terascale Spectral Image Catalogs

    NASA Astrophysics Data System (ADS)

    Thompson, D. R.; Smith, A. T.; Castano, R.; Palmer, E. E.; Xing, Z.

    2013-12-01

    Imaging spectrometers are remote sensing instruments commonly deployed on aircraft and spacecraft. They provide surface reflectance in hundreds of wavelength channels, creating data cubes known as hyperspecrtral images. They provide rich compositional information making them powerful tools for planetary and terrestrial science. These data products can be challenging to interpret because they contain datapoints numbering in the thousands (Dawn VIR) or millions (AVIRIS-C). Cross-image studies or exploratory searches involving more than one scene are rare; data volumes are often tens of GB per image and typical consumer-grade computers cannot store more than a handful of images in RAM. Visualizing the information in a single scene is challenging since the human eye can only distinguish three color channels out of the hundreds available. To date, analysis has been performed mostly on single images using purpose-built software tools that require extensive training and commercial licenses. The HSIFind software suite provides a scalable distributed solution to the problem of visualizing and searching large catalogs of spectral image data. It consists of a RESTful web service that communicates to a javascript-based browser client. The software provides basic visualization through an intuitive visual interface, allowing users with minimal training to explore the images or view selected spectra. Users can accumulate a library of spectra from one or more images and use these to search for similar materials. The result appears as an intensity map showing the extent of a spectral feature in a scene. Continuum removal can isolate diagnostic absorption features. The server-side mapping algorithm uses an efficient matched filter algorithm that can process a megapixel image cube in just a few seconds. This enables real-time interaction, leading to a new way of interacting with the data: the user can launch a search with a single mouse click and see the resulting map in seconds

  11. The NCSA Astronomy Digital Image Library: from data archiving to data publishing.

    NASA Astrophysics Data System (ADS)

    Plante, R. L.; Crutcher, R. M.; McGrath, R. E.

    1999-11-01

    The NCSA Astronomy Digital Image Library (ADIL), a repository providing astronomers with research-quality images over the Web, represents the final stage of the data-research pipeline that begins at the telescope and ends with the publication of scientific results. By examining the ADIL's mission and architecture, the authors highlight some of the challenges arising from the development of a scientific data library. After an overview of the motivation and context surrounding the Library, they present the two faces of its user interface: one for those looking for data, and one for those wishing to add to the Library's collection. They then outline the design of the Library's back-end system, describing some of the technical choices made during its development. Finally, the authors examine the role of the ADIL in the evolving life cycle of scientific data, highlighting two important issues: interoperability and data publishing. Today, the data life cycle is almost entirely electronic; thus, the scientific data library becomes a critical part of the solution to the 'Data Crisis' in astronomy: keeping up with the exploding growth of new data.

  12. Using relevant regions in image search and query refinement for medical CBIR

    NASA Astrophysics Data System (ADS)

    Kim, Edward; Antani, Sameer; Huang, Xiaolei; Long, L. Rodney; Demner-Fushman, Dina

    2011-03-01

    In clinical decision processes, relevant scientific publications and their associated medical images can provide valuable and insightful information. However, effectively searching through both text and image data is a difficult and arduous task. More specifically in the area of image search, finding similar images (or regions within images) poses another significant hurdle for effective knowledge dissemination. Thus, we propose a method using local regions within images to perform and refine medical image retrieval. In our first example, we define and extract large, characteristic regions within an image, and then show how to use these regions to match a query image to similar content. In our second example, we enable the formulation of a mixed query based upon text, image, and region information, to better represent the end user's search intentions. Given our new framework for region-based queries, we present an improved set of similar search results.

  13. Imaging combinatorial libraries by mass spectrometry: from peptide to organic-supported syntheses.

    PubMed

    Enjalbal, Christine; Maux, Delphine; Combarieu, Robert; Martinez, Jean; Aubagnac, Jean-Louis

    2003-01-01

    Supported peptide and drug-like organic molecule libraries were profiled in single nondestructive imaging static secondary ion mass spectrometric experiments. The selective rupture of the bond linking the compound and the insoluble polymeric support (resin) produced ions that were characteristic of the anchored molecules, thus allowing unambiguous resin bead assignment. Very high sensitivity and specificity were obtained with such a direct analytical method, which avoids the chemical release of the molecules from the support. Libraries issued from either mix-and-split or parallel solid-phase organic syntheses were profiled, demonstrating the usefulness of such a technique for characterization and optimization during combinatorial library development. Moreover, the fact that the control was effected at the bead level whatever the structure and quantity of the anchored molecules allows the sole identification of active beads selected from on-bead screening. Under such circumstances, the time-consuming whole-library characterization could thus be suppressed, enhancing the throughput of the analytical process.

  14. Managing biomedical image metadata for search and retrieval of similar images.

    PubMed

    Korenblum, Daniel; Rubin, Daniel; Napel, Sandy; Rodriguez, Cesar; Beaulieu, Chris

    2011-08-01

    Radiology images are generally disconnected from the metadata describing their contents, such as imaging observations ("semantic" metadata), which are usually described in text reports that are not directly linked to the images. We developed a system, the Biomedical Image Metadata Manager (BIMM) to (1) address the problem of managing biomedical image metadata and (2) facilitate the retrieval of similar images using semantic feature metadata. Our approach allows radiologists, researchers, and students to take advantage of the vast and growing repositories of medical image data by explicitly linking images to their associated metadata in a relational database that is globally accessible through a Web application. BIMM receives input in the form of standard-based metadata files using Web service and parses and stores the metadata in a relational database allowing efficient data query and maintenance capabilities. Upon querying BIMM for images, 2D regions of interest (ROIs) stored as metadata are automatically rendered onto preview images included in search results. The system's "match observations" function retrieves images with similar ROIs based on specific semantic features describing imaging observation characteristics (IOCs). We demonstrate that the system, using IOCs alone, can accurately retrieve images with diagnoses matching the query images, and we evaluate its performance on a set of annotated liver lesion images. BIMM has several potential applications, e.g., computer-aided detection and diagnosis, content-based image retrieval, automating medical analysis protocols, and gathering population statistics like disease prevalences. The system provides a framework for decision support systems, potentially improving their diagnostic accuracy and selection of appropriate therapies.

  15. Digitization and the Creation of Virtual Libraries: The Princeton University Image Card Catalog--Reaping the Benefits of Imaging.

    ERIC Educational Resources Information Center

    Henthorne, Eileen

    1995-01-01

    Describes a project at the Princeton University libraries that converted the pre-1981 public card catalog, using digital imaging and optical character recognition technology, to fully tagged and indexed records of text in MARC format that are available on an online database and will be added to the online catalog. (LRW)

  16. Featured Image: A Search for Stellar Bow Shock Nebulae

    NASA Astrophysics Data System (ADS)

    Kohler, Susanna

    2017-02-01

    These dynamic infrared images (click for the full view!) reveal what are known as bow shock nebulae nebulae that form at the interface between the interstellar medium and the stellar wind from a high-speed star zipping through the galaxy (the arrows show the direction of motion of the star). When the relative speed between the two is supersonic, an arc-shaped bow shock forms ahead of the star, like the six prototypical ones pictured here. A team of scientists led by Henry Kobulnicky (University of Wyoming) has recently searched through survey data from the Spitzer Space Telescope and the Wide Field Infrared Explorer (WISE) to build a catalog of more than 700 such bow-shock nebula candidates, the vast majority of which are new discoveries. To find out more about their sample, check out the paper below!CitationHenry A. Kobulnicky et al 2016 ApJS 227 18. doi:10.3847/0067-0049/227/2/18

  17. Lyman Continuum Emission Search at z 1 Using GALEX Imaging

    NASA Astrophysics Data System (ADS)

    Friedman, Peter G.; Small, T. A.; Deharveng, J. M.; Milliard, B.

    2007-12-01

    We present the status and results of a search for Lyman continuum emission from galaxies at z 1. We use GALEX data in the Extended Groth Strip. Our method is to stack FUV image flux at locations of DEEP2 redshift catalog galaxies in the redshift range 1 < z < 1.5. In this range, the GALEX FUV band (1350-1800 A) is sensitive only to rest wavelengths below 912 A. We normalize FUV flux to NUV flux and calculate the Lyman continuum emission escape fraction by fitting SED models to broad-band fluxes from ground-based surveys of the same galaxies. GALEX is a NASA Small Explorer mission with contributions from France and South Korea. This work uses data from the AEGIS collaboration, which is supported by grants from the National Science Foundation, NASA, and the Keck Observatory.

  18. GALEX Imaging Search for Lyman Continuum Emission at z 1

    NASA Astrophysics Data System (ADS)

    Friedman, Peter G.; Small, T. A.; Deharveng, J. M.; Milliard, B.

    2009-01-01

    We present the status and results of a search for Lyman continuum emission from galaxies at z 1. We use GALEX data in the Extended Groth Strip. Our method is to stack FUV image flux at locations of DEEP2 redshift catalog galaxies in the redshift range 1 < z < 1.5. In this range, the GALEX FUV band (1350-1800 A) is sensitive only to rest wavelengths below 912 A. We normalize FUV flux to NUV flux and calculate the Lyman continuum emission escape fraction by fitting SED models to broad-band fluxes from ground-based surveys of the same galaxies. GALEX is a NASA Small Explorer mission with contributions from France and South Korea. This work uses data from the AEGIS collaboration, which is supported by grants from the National Science Foundation, NASA, and the Keck Observatory.

  19. GALEX Imaging Search for Lyman Continuum Emission at z 1

    NASA Astrophysics Data System (ADS)

    Friedman, Peter G.; Small, T. A.; Deharveng, J. M.; Milliard, B.

    2010-01-01

    We present the status and results of a search for Lyman continuum emission from galaxies at z 1. We use GALEX data in the Extended Groth Strip. Our method is to stack FUV image flux at locations of DEEP2 redshift catalog galaxies in the redshift range 1 < z < 1.5. In this range, the GALEX FUV band (1350-1800 A) is sensitive only to rest wavelengths below 912 A. We normalize FUV flux to NUV flux and calculate the Lyman continuum emission escape fraction by fitting SED models to broad-band fluxes from ground-based surveys of the same galaxies. GALEX is a NASA Small Explorer mission with contributions from France and South Korea. This work uses data from the AEGIS collaboration, which is supported by grants from the National Science Foundation, NASA, and the Keck Observatory.

  20. Creating a large-scale content-based airphoto image digital library.

    PubMed

    Zhu, B; Ramsey, M; Chen, H

    2000-01-01

    This paper describes a content-based image retrieval digital library that supports geographical image retrieval over a testbed of 800 aerial photographs, each 25 megabytes in size. In addition, this paper also introduces a methodology to evaluate the performance of the algorithms in the prototype system. There are two major contributions: we suggest an approach that incorporates various image processing techniques including Gabor filters, image enhancement and image compression, as well as information analysis techniques such as the self-organizing map (SOM) into an effective large-scale geographical image retrieval system. We present two experiments that evaluate the performance of the Gabor-filter-extracted features along with the corresponding similarity measure against that of human perception, addressing the lack of studies in assessing the consistency between an image representation algorithm or an image categorization method and human mental model.

  1. Categorical and Specificity Differences between User-Supplied Tags and Search Query Terms for Images. An Analysis of "Flickr" Tags and Web Image Search Queries

    ERIC Educational Resources Information Center

    Chung, EunKyung; Yoon, JungWon

    2009-01-01

    Introduction: The purpose of this study is to compare characteristics and features of user supplied tags and search query terms for images on the "Flickr" Website in terms of categories of pictorial meanings and level of term specificity. Method: This study focuses on comparisons between tags and search queries using Shatford's categorization…

  2. Find Good Sources of Online Images: A Picture Doesn't Have to Be a Thousand Searches

    ERIC Educational Resources Information Center

    Branzburg, Jeffrey

    2006-01-01

    The Internet is a natural place to look for images that teachers can use in lessons and students can use in projects and assignments. Google, Yahoo, AltaVista--many of these popular search engines offer image searching. Usually there is a tab to click at the top of the page to select image searching; just enter a search term and go! However, this…

  3. Visual Image Transmission. An Examination of Electronic Delivery of Visual Images and Text from the Library to the Academic Community. Final Report.

    ERIC Educational Resources Information Center

    Smith, Merrill W.; And Others

    Designed to examine the potential for delivering images stored on videodisc and other optical media from the library to the classroom, the pilot project described in this report has focused on ways to transmit still color or black and white images from the library's collection to a constituent academic unit. This report discusses analog and…

  4. RVC-CAL library for endmember and abundance estimation in hyperspectral image analysis

    NASA Astrophysics Data System (ADS)

    Lazcano López, R.; Madroñal Quintín, D.; Juárez Martínez, E.; Sanz Álvaro, C.

    2015-10-01

    Hyperspectral imaging (HI) collects information from across the electromagnetic spectrum, covering a wide range of wavelengths. Although this technology was initially developed for remote sensing and earth observation, its multiple advantages - such as high spectral resolution - led to its application in other fields, as cancer detection. However, this new field has shown specific requirements; for instance, it needs to accomplish strong time specifications, since all the potential applications - like surgical guidance or in vivo tumor detection - imply real-time requisites. Achieving this time requirements is a great challenge, as hyperspectral images generate extremely high volumes of data to process. Thus, some new research lines are studying new processing techniques, and the most relevant ones are related to system parallelization. In that line, this paper describes the construction of a new hyperspectral processing library for RVC-CAL language, which is specifically designed for multimedia applications and allows multithreading compilation and system parallelization. This paper presents the development of the required library functions to implement two of the four stages of the hyperspectral imaging processing chain--endmember and abundances estimation. The results obtained show that the library achieves speedups of 30%, approximately, comparing to an existing software of hyperspectral images analysis; concretely, the endmember estimation step reaches an average speedup of 27.6%, which saves almost 8 seconds in the execution time. It also shows the existence of some bottlenecks, as the communication interfaces among the different actors due to the volume of data to transfer. Finally, it is shown that the library considerably simplifies the implementation process. Thus, experimental results show the potential of a RVC-CAL library for analyzing hyperspectral images in real-time, as it provides enough resources to study the system performance.

  5. Extending the Role of the Corporate Library: Corporate Database Applications Using BRS/Search Software.

    ERIC Educational Resources Information Center

    Lammert, Diana

    1993-01-01

    Describes the McKenna Information Center's application of BRS/SEARCH, information retrieval software, as part of its services to Kennmetal Inc., its parent company. Features and uses of the software, including commands, custom searching, menu-driven interfaces, preparing reports, and designing databases are covered. Nine examples of software…

  6. Strategies for Searching: A Self-Paced Workbook for Learning Basic Library Skills. 1991 Edition.

    ERIC Educational Resources Information Center

    Van Noate, Judith

    This self-paced workbook is designed to help students at the University of North Carolina-Charlotte acquire basic research skills in using a university library. The workbook, which is designed for use by students in English 1101, is divided into four major sections: (1) Introduction; (2) Encyclopedias (e.g., general, specialized, and encyclopedia…

  7. Searching for Materials to Teach about Religion? Check Your School Library.

    ERIC Educational Resources Information Center

    Boardman, Edna M.

    1992-01-01

    Provides a reference guide on religious materials in the public school library. Argues that social studies teachers can integrate references on religion into their teaching while respecting the freedom of conscience of their students. Identifies documents, fiction, nonfiction, periodicals, and the appropriate section of the Dewey Decimal…

  8. Strategies for Searching. A Self-Paced Workbook for Basic Library Skills. Second Edition.

    ERIC Educational Resources Information Center

    Hales, Celia; And Others

    This self-paced workbook is designed to help students at the University of North Carolina-Charlotte acquire basic skills in using a university library. The workbook, which is used in conjuction with course assignments, is divided into six sections: (l) Introduction; (2) How to Locate Background Information; (3) How to Locate Books; (4) How to…

  9. Online/CD-ROM Bibliographic Database Searching in a Small Academic Library.

    ERIC Educational Resources Information Center

    Pitet, Lynn T.

    The purpose of the project described in this paper was to gather information about online/CD-ROM database systems that would be useful in improving the services offered at the University of Findlay, a small private liberal arts college in northwestern Ohio. A survey was sent to 67 libraries serving colleges similar in size which included questions…

  10. Planning to Plan; A Search for a 1977 General Plan for Nebraska Libraries.

    ERIC Educational Resources Information Center

    Kemper, Robert Eugene

    This is a summary of the planning process which will be followed in pursuit of the "1977 General Plan," (LI004046). It is designed to guide the activities which give growth and direction to Nebraska libraries during at least the next five years. The summary of the Nebraska Five Year Long Range Planning Process represents the best…

  11. Using EPIC to search the OCLC Online Union Catalog in a health sciences library.

    PubMed

    Richwine, P W

    1991-01-01

    EPIC is a service that provides keyword or subject access to the OCLC Online Union Catalog (OLUC). This capability increases the success rate for title location as well as the potential uses of the OLUC. The features of the EPIC system, application of these features to the OLUC, and specific uses in health sciences libraries are described in this article.

  12. Teaching image processing and pattern recognition with the Intel OpenCV library

    NASA Astrophysics Data System (ADS)

    Kozłowski, Adam; Królak, Aleksandra

    2009-06-01

    In this paper we present an approach to teaching image processing and pattern recognition with the use of the OpenCV library. Image processing, pattern recognition and computer vision are important branches of science and apply to tasks ranging from critical, involving medical diagnostics, to everyday tasks including art and entertainment purposes. It is therefore crucial to provide students of image processing and pattern recognition with the most up-to-date solutions available. In the Institute of Electronics at the Technical University of Lodz we facilitate the teaching process in this subject with the OpenCV library, which is an open-source set of classes, functions and procedures that can be used in programming efficient and innovative algorithms for various purposes. The topics of student projects completed with the help of the OpenCV library range from automatic correction of image quality parameters or creation of panoramic images from video to pedestrian tracking in surveillance camera video sequences or head-movement-based mouse cursor control for the motorically impaired.

  13. SymDex: increasing the efficiency of chemical fingerprint similarity searches for comparing large chemical libraries by using query set indexing.

    PubMed

    Tai, David; Fang, Jianwen

    2012-08-27

    The large sizes of today's chemical databases require efficient algorithms to perform similarity searches. It can be very time consuming to compare two large chemical databases. This paper seeks to build upon existing research efforts by describing a novel strategy for accelerating existing search algorithms for comparing large chemical collections. The quest for efficiency has focused on developing better indexing algorithms by creating heuristics for searching individual chemical against a chemical library by detecting and eliminating needless similarity calculations. For comparing two chemical collections, these algorithms simply execute searches for each chemical in the query set sequentially. The strategy presented in this paper achieves a speedup upon these algorithms by indexing the set of all query chemicals so redundant calculations that arise in the case of sequential searches are eliminated. We implement this novel algorithm by developing a similarity search program called Symmetric inDexing or SymDex. SymDex shows over a 232% maximum speedup compared to the state-of-the-art single query search algorithm over real data for various fingerprint lengths. Considerable speedup is even seen for batch searches where query set sizes are relatively small compared to typical database sizes. To the best of our knowledge, SymDex is the first search algorithm designed specifically for comparing chemical libraries. It can be adapted to most, if not all, existing indexing algorithms and shows potential for accelerating future similarity search algorithms for comparing chemical databases.

  14. Effect of Reading Ability and Internet Experience on Keyword-Based Image Search

    ERIC Educational Resources Information Center

    Lei, Pei-Lan; Lin, Sunny S. J.; Sun, Chuen-Tsai

    2013-01-01

    Image searches are now crucial for obtaining information, constructing knowledge, and building successful educational outcomes. We investigated how reading ability and Internet experience influence keyword-based image search behaviors and performance. We categorized 58 junior-high-school students into four groups of high/low reading ability and…

  15. Trainable Cataloging for Digital Image Libraries with Applications to Volcano Detection

    NASA Technical Reports Server (NTRS)

    Burl, M. C.; Fayyad, U. M.; Perona, P.; Smyth, P.

    1995-01-01

    Users of digital image libraries are often not interested in image data per se but in derived products such as catalogs of objects of interest. Converting an image database into a usable catalog is typically carried out manually at present. For many larger image databases the purely manual approach is completely impractical. In this paper we describe the development of a trainable cataloging system: the user indicates the location of the objects of interest for a number of training images and the system learns to detect and catalog these objects in the rest of the database. In particular we describe the application of this system to the cataloging of small volcanoes in radar images of Venus. The volcano problem is of interest because of the scale (30,000 images, order of 1 million detectable volcanoes), technical difficulty (the variability of the volcanoes in appearance) and the scientific importance of the problem. The problem of uncertain or subjective ground truth is of fundamental importance in cataloging problems of this nature and is discussed in some detail. Experimental results are presented which quantify and compare the detection performance of the system relative to human detection performance. The paper concludes by discussing the limitations of the proposed system and the lessons learned of general relevance to the development of digital image libraries.

  16. Start Your Search Engines. Part 2: When Image is Everything, Here are Some Great Ways to Find One

    ERIC Educational Resources Information Center

    Adam, Anna; Mowers, Helen

    2008-01-01

    There is no doubt that Google is great for finding images. Simply head to its home page, click the "Images" link, enter criteria in the search box, and--voila! In this article, the authors share some of their other favorite search engines for finding images. To make sure the desired images are available for educational use, consider searching for…

  17. A geometry-based image search engine for advanced RADARSAT-1/2 GIS applications

    NASA Astrophysics Data System (ADS)

    Kotamraju, Vinay; Rabus, Bernhard; Busler, Jennifer

    2012-06-01

    Space-borne Synthetic Aperture Radar (SAR) sensors, such as RADARSAT-1 and -2, enable a multitude of defense and security applications owing to their unique capabilities of cloud penetration, day/night imaging and multi-polarization imaging. As a result, advanced SAR image time series exploitation techniques such as Interferometric SAR (InSAR) and Radargrammetry are now routinely used in applications such as underground tunnel monitoring, infrastructure monitoring and DEM generation. Imaging geometry, as determined by the satellite orbit and imaged terrain, plays a critical role in the success of such techniques. This paper describes the architecture and the current status of development of a geometry-based search engine that allows the search and visualization of archived and future RADARSAT-1 and -2 images appropriate for a variety of advanced SAR techniques and applications. Key features of the search engine's scalable architecture include (a) Interactive GIS-based visualization of the search results; (b) A client-server architecture for online access that produces up-to-date searches of the archive images and that can, in future, be extended to acquisition planning; (c) A techniquespecific search mode, wherein an expert user explicitly sets search parameters to find appropriate images for advanced SAR techniques such as InSAR and Radargrammetry; (d) A future application-specific search mode, wherein all search parameters implicitly default to preset values according to the application of choice such as tunnel monitoring, DEM generation and deformation mapping; (f) Accurate baseline calculations for InSAR searches, and, optimum beam configuration for Radargrammetric searches; (g) Simulated quick look images and technique-specific sensitivity maps in the future.

  18. Associative memory model for searching an image database by image snippet

    NASA Astrophysics Data System (ADS)

    Khan, Javed I.; Yun, David Y.

    1994-09-01

    This paper presents an associative memory called an multidimensional holographic associative computing (MHAC), which can be potentially used to perform feature based image database query using image snippet. MHAC has the unique capability to selectively focus on specific segments of a query frame during associative retrieval. As a result, this model can perform search on the basis of featural significance described by a subset of the snippet pixels. This capability is critical for visual query in image database because quite often the cognitive index features in the snippet are statistically weak. Unlike, the conventional artificial associative memories, MHAC uses a two level representation and incorporates additional meta-knowledge about the reliability status of segments of information it receives and forwards. In this paper we present the analysis of focus characteristics of MHAC.

  19. Multimedia explorer: image database, image proxy-server and search-engine.

    PubMed Central

    Frankewitsch, T.; Prokosch, U.

    1999-01-01

    Multimedia plays a major role in medicine. Databases containing images, movies or other types of multimedia objects are increasing in number, especially on the WWW. However, no good retrieval mechanism or search engine currently exists to efficiently track down such multimedia sources in the vast of information provided by the WWW. Secondly, the tools for searching databases are usually not adapted to the properties of images. HTML pages do not allow complex searches. Therefore establishing a more comfortable retrieval involves the use of a higher programming level like JAVA. With this platform independent language it is possible to create extensions to commonly used web browsers. These applets offer a graphical user interface for high level navigation. We implemented a database using JAVA objects as the primary storage container which are then stored by a JAVA controlled ORACLE8 database. Navigation depends on a structured vocabulary enhanced by a semantic network. With this approach multimedia objects can be encapsulated within a logical module for quick data retrieval. PMID:10566463

  20. Thermal Image Sensing Model for Robotic Planning and Search.

    PubMed

    Castro Jiménez, Lídice E; Martínez-García, Edgar A

    2016-08-08

    This work presents a search planning system for a rolling robot to find a source of infra-red (IR) radiation at an unknown location. Heat emissions are observed by a low-cost home-made IR passive visual sensor. The sensor capability for detection of radiation spectra was experimentally characterized. The sensor data were modeled by an exponential model to estimate the distance as a function of the IR image's intensity, and, a polynomial model to estimate temperature as a function of IR intensities. Both theoretical models are combined to deduce a subtle nonlinear exact solution via distance-temperature. A planning system obtains feed back from the IR camera (position, intensity, and temperature) to lead the robot to find the heat source. The planner is a system of nonlinear equations recursively solved by a Newton-based approach to estimate the IR-source in global coordinates. The planning system assists an autonomous navigation control in order to reach the goal and avoid collisions. Trigonometric partial differential equations were established to control the robot's course towards the heat emission. A sine function produces attractive accelerations toward the IR source. A cosine function produces repulsive accelerations against the obstacles observed by an RGB-D sensor. Simulations and real experiments of complex indoor are presented to illustrate the convenience and efficacy of the proposed approach.

  1. Comparing image search behaviour in the ARRS GoldMiner search engine and a clinical PACS/RIS.

    PubMed

    De-Arteaga, Maria; Eggel, Ivan; Do, Bao; Rubin, Daniel; Kahn, Charles E; Müller, Henning

    2015-08-01

    Information search has changed the way we manage knowledge and the ubiquity of information access has made search a frequent activity, whether via Internet search engines or increasingly via mobile devices. Medical information search is in this respect no different and much research has been devoted to analyzing the way in which physicians aim to access information. Medical image search is a much smaller domain but has gained much attention as it has different characteristics than search for text documents. While web search log files have been analysed many times to better understand user behaviour, the log files of hospital internal systems for search in a PACS/RIS (Picture Archival and Communication System, Radiology Information System) have rarely been analysed. Such a comparison between a hospital PACS/RIS search and a web system for searching images of the biomedical literature is the goal of this paper. Objectives are to identify similarities and differences in search behaviour of the two systems, which could then be used to optimize existing systems and build new search engines. Log files of the ARRS GoldMiner medical image search engine (freely accessible on the Internet) containing 222,005 queries, and log files of Stanford's internal PACS/RIS search called radTF containing 18,068 queries were analysed. Each query was preprocessed and all query terms were mapped to the RadLex (Radiology Lexicon) terminology, a comprehensive lexicon of radiology terms created and maintained by the Radiological Society of North America, so the semantic content in the queries and the links between terms could be analysed, and synonyms for the same concept could be detected. RadLex was mainly created for the use in radiology reports, to aid structured reporting and the preparation of educational material (Lanlotz, 2006) [1]. In standard medical vocabularies such as MeSH (Medical Subject Headings) and UMLS (Unified Medical Language System) specific terms of radiology are often

  2. Clinical evaluation of using semantic searching engine for radiological imaging services in RIS-integrated PACS

    NASA Astrophysics Data System (ADS)

    Ling, Tonghui; Zhang, Kai; Yang, Yuanyuan; Hua, Yanqing; Zhang, Jianguo

    2015-03-01

    We had designed a semantic searching engine (SSE) for radiological imaging to search both reports and images in RIS-integrated PACS environment. In this presentation, we present evaluation results of this SSE about how it impacting the radiologists' behaviors in reporting for different kinds of examinations, and how it improving the performance of retrieval and usage of historical images in RIS-integrated PACS.

  3. Design of Content Based Image Retrieval Scheme for Diabetic Retinopathy Images using Harmony Search Algorithm.

    PubMed

    Sivakamasundari, J; Natarajan, V

    2015-01-01

    Diabetic Retinopathy (DR) is a disorder that affects the structure of retinal blood vessels due to long-standing diabetes mellitus. Automated segmentation of blood vessel is vital for periodic screening and timely diagnosis. An attempt has been made to generate continuous retinal vasculature for the design of Content Based Image Retrieval (CBIR) application. The typical normal and abnormal retinal images are preprocessed to improve the vessel contrast. The blood vessels are segmented using evolutionary based Harmony Search Algorithm (HSA) combined with Otsu Multilevel Thresholding (MLT) method by best objective functions. The segmentation results are validated with corresponding ground truth images using binary similarity measures. The statistical, textural and structural features are obtained from the segmented images of normal and DR affected retina and are analyzed. CBIR in medical image retrieval applications are used to assist physicians in clinical decision-support techniques and research fields. A CBIR system is developed using HSA based Otsu MLT segmentation technique and the features obtained from the segmented images. Similarity matching is carried out between the features of query and database images using Euclidean Distance measure. Similar images are ranked and retrieved. The retrieval performance of CBIR system is evaluated in terms of precision and recall. The CBIR systems developed using HSA based Otsu MLT and conventional Otsu MLT methods are compared. The retrieval performance such as precision and recall are found to be 96% and 58% for CBIR system using HSA based Otsu MLT segmentation. This automated CBIR system could be recommended for use in computer assisted diagnosis for diabetic retinopathy screening.

  4. Hierarchical content-based image retrieval by dynamic indexing and guided search

    NASA Astrophysics Data System (ADS)

    You, Jane; Cheung, King H.; Liu, James; Guo, Linong

    2003-12-01

    This paper presents a new approach to content-based image retrieval by using dynamic indexing and guided search in a hierarchical structure, and extending data mining and data warehousing techniques. The proposed algorithms include: a wavelet-based scheme for multiple image feature extraction, the extension of a conventional data warehouse and an image database to an image data warehouse for dynamic image indexing, an image data schema for hierarchical image representation and dynamic image indexing, a statistically based feature selection scheme to achieve flexible similarity measures, and a feature component code to facilitate query processing and guide the search for the best matching. A series of case studies are reported, which include a wavelet-based image color hierarchy, classification of satellite images, tropical cyclone pattern recognition, and personal identification using multi-level palmprint and face features.

  5. Blocking of pornography-seeking behavior in digital image libraries: adventures in the skin trade.

    PubMed

    Lehmann, Christoph U; Cohen, Bernard A; Kim, George R

    2005-01-01

    The escalating competition between online pornography - seeking and disseminating behaviors and technologies that attempt to reduce them creates technical, semantic and legal barriers to the legitimate discussion of and education about sensitive health issues involving sexuality, anatomy and pathology, especially when image-based knowledge is used. The effects of this competition on the use and management of an online dermatology atlas are described with a discussion on the importance of anticipating, addressing and controlling this problem while developing and maintaining image-based digital libraries and other e-Health applications.

  6. State Virtual Libraries

    ERIC Educational Resources Information Center

    Pappas, Marjorie L.

    2003-01-01

    Virtual library? Electronic library? Digital library? Online information network? These all apply to the growing number of Web-based resource collections managed by consortiums of state library entities. Some, like "INFOhio" and "KYVL" ("Kentucky Virtual Library"), have been available for a few years, but others are just starting. Searching for…

  7. Images of Computer Searching: Depictions in Educational Research Textbooks.

    ERIC Educational Resources Information Center

    Schumacher, Mark

    1986-01-01

    Educational research textbooks often portray online computer searching as available only from distant database producers, or as something students can do for themselves without assistance from a reference librarian/search intermediary. User education may be needed in this area to correct users' misconceptions. (Author/EM)

  8. Digital Libraries.

    ERIC Educational Resources Information Center

    Fox, Edward A.; Urs, Shalini R.

    2002-01-01

    Provides an overview of digital libraries research, practice, and literature. Highlights include new technologies; redefining roles; historical background; trends; creating digital content, including conversion; metadata; organizing digital resources; services; access; information retrieval; searching; natural language processing; visualization;…

  9. Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits

    PubMed Central

    Hayworth, Kenneth J.; Morgan, Josh L.; Schalek, Richard; Berger, Daniel R.; Hildebrand, David G. C.; Lichtman, Jeff W.

    2014-01-01

    The automated tape-collecting ultramicrotome (ATUM) makes it possible to collect large numbers of ultrathin sections quickly—the equivalent of a petabyte of high resolution images each day. However, even high throughput image acquisition strategies generate images far more slowly (at present ~1 terabyte per day). We therefore developed WaferMapper, a software package that takes a multi-resolution approach to mapping and imaging select regions within a library of ultrathin sections. This automated method selects and directs imaging of corresponding regions within each section of an ultrathin section library (UTSL) that may contain many thousands of sections. Using WaferMapper, it is possible to map thousands of tissue sections at low resolution and target multiple points of interest for high resolution imaging based on anatomical landmarks. The program can also be used to expand previously imaged regions, acquire data under different imaging conditions, or re-image after additional tissue treatments. PMID:25018701

  10. The Control Point Library Building System. [for Landsat MSS and RBV geometric image correction

    NASA Technical Reports Server (NTRS)

    Niblack, W.

    1981-01-01

    The Earth Resources Observation System (EROS) Data Center in Sioux Falls, South Dakota distributes precision corrected Landsat MSS and RBV data. These data are derived from master data tapes produced by the Master Data Processor (MDP), NASA's system for computing and applying corrections to the data. Included in the MDP is the Control Point Library Building System (CPLBS), an interactive, menu-driven system which permits a user to build and maintain libraries of control points. The control points are required to achieve the high geometric accuracy desired in the output MSS and RBV data. This paper describes the processing performed by CPLBS, the accuracy of the system, and the host computer and special image viewing equipment employed.

  11. Dimensionality reduction and endmember extraction for hyperspectral imaging using an RVC-CAL library

    NASA Astrophysics Data System (ADS)

    Madroñal Quintín, D.; Lazcano López, R.; Juárez Martínez, E.; Sanz Álvaro, C.

    2015-10-01

    Hyperspectral Imaging (HI) collects high resolution spectral information consisting of hundred of bands raging from the infrared to the ultraviolet wave lengths. In the medical field, specifically, in the cancer tissue identification at the operating room, the potential of HI is huge. However, given the data volume of HI and the computational complexity and cost of identification algorithms, real-time processing is the key, differential feature that brings value to surgeons. In order to achieve real-time implementations, the parallelism available in a specification needs to be explicitly highlighted. Data-flow programming languages, like RVC-CAL, are able to accomplish this goal. In this paper, an RVC-CAL library to implement dimensionality reduction and endmember extraction is presented. The results obtained show significant improvements with regard to a state-of-the-art analysis tool. A speedup of 30% is carried out using the complete processing chain and, in particular, a speedup of 5% has been achieved in the dimensionality reduction step. This dimensionality reduction takes ten of the thirteen seconds that the whole system needs to analyze one of the images. In addition, the RVC-CAL library is an excellent tool to simplify the implementation process of HI algorithms. Effectively, during the experimental test, the potential of the RVC-CAL library to reveal possible bottlenecks present in the HI processing chain and, therefore, to improve the system performance to achieve real-time constraints has been shown. Furthermore, the RVC-CAL library provides the possibility of system performance testing.

  12. Information Literacy for Users at the National Medical Library of Cuba: Cochrane Library Course for the Search of Best Evidence for Clinical Decisions

    ERIC Educational Resources Information Center

    Santana Arroyo, Sonia; del Carmen Gonzalez Rivero, Maria

    2012-01-01

    The National Medical Library of Cuba is currently developing an information literacy program to train users in the use of biomedical databases. This paper describes the experience with the course "Cochrane Library: Evidence-Based Medicine," which aims to teach users how to make the best use of this database, as well as the evidence-based…

  13. Analyzing web log files of the health on the net HONmedia search engine to define typical image search tasks for image retrieval evaluation.

    PubMed

    Müller, Henning; Boyer, Célia; Gaudinat, Arnaud; Hersh, William; Geissbuhler, Antoine

    2007-01-01

    Medical institutions produce ever-increasing amount of diverse information. The digital form makes these data available for the use on more than a single patient. Images are no exception to this. However, less is known about how medical professionals search for visual medical information and how they want to use it outside of the context of a single patient. This article analyzes ten months of usage log files of the Health on the Net (HON) medical media search engine. Key words were extracted from all queries and the most frequent terms and subjects were identified. The dataset required much pre-treatment. Problems included national character sets, spelling errors and the use of terms in several languages. The results show that media search, particularly for images, was frequently used. The most common queries were for general concepts (e.g., heart, lung). To define realistic information needs for the ImageCLEFmed challenge evaluation (Cross Language Evaluation Forum medical image retrieval), we used frequent queries that were still specific enough to at least cover two of the three axes on modality, anatomic region, and pathology. Several research groups evaluated their image retrieval algorithms based on these defined topics.

  14. Web Image Search Re-ranking with Click-based Similarity and Typicality.

    PubMed

    Yang, Xiaopeng; Mei, Tao; Zhang, Yong Dong; Liu, Jie; Satoh, Shin'ichi

    2016-07-20

    In image search re-ranking, besides the well known semantic gap, intent gap, which is the gap between the representation of users' query/demand and the real intent of the users, is becoming a major problem restricting the development of image retrieval. To reduce human effects, in this paper, we use image click-through data, which can be viewed as the "implicit feedback" from users, to help overcome the intention gap, and further improve the image search performance. Generally, the hypothesis visually similar images should be close in a ranking list and the strategy images with higher relevance should be ranked higher than others are widely accepted. To obtain satisfying search results, thus, image similarity and the level of relevance typicality are determinate factors correspondingly. However, when measuring image similarity and typicality, conventional re-ranking approaches only consider visual information and initial ranks of images, while overlooking the influence of click-through data. This paper presents a novel re-ranking approach, named spectral clustering re-ranking with click-based similarity and typicality (SCCST). First, to learn an appropriate similarity measurement, we propose click-based multi-feature similarity learning algorithm (CMSL), which conducts metric learning based on clickbased triplets selection, and integrates multiple features into a unified similarity space via multiple kernel learning. Then based on the learnt click-based image similarity measure, we conduct spectral clustering to group visually and semantically similar images into same clusters, and get the final re-rank list by calculating click-based clusters typicality and withinclusters click-based image typicality in descending order. Our experiments conducted on two real-world query-image datasets with diverse representative queries show that our proposed reranking approach can significantly improve initial search results, and outperform several existing re-ranking approaches.

  15. Ideal and visual-search observers: accounting for anatomical noise in search tasks with planar nuclear imaging

    NASA Astrophysics Data System (ADS)

    Sen, Anando; Gifford, Howard C.

    2015-03-01

    Model observers have frequently been used for hardware optimization of imaging systems. For model observers to reliably mimic human performance it is important to account for the sources of variations in the images. Detection-localization tasks are complicated by anatomical noise present in the images. Several scanning observers have been proposed for such tasks. The most popular of these, the channelized Hotelling observer (CHO) incorporates anatomical variations through covariance matrices. We propose the visual-search (VS) observer as an alternative to the CHO to account for anatomical noise. The VS observer is a two-step process which first identifies suspicious tumor candidates and then performs a detailed analysis on them. The identification of suspicious candidates (search) implicitly accounts for anatomical noise. In this study we present a comparison of these two observers with human observers. The application considered is collimator optimization for planar nuclear imaging. Both observers show similar trends in performance with the VS observer slightly closer to human performance.

  16. A Fieldable-Prototype Large-Area Gamma-ray Imager for Orphan Source Search

    SciTech Connect

    Ziock, Klaus-Peter; Fabris, Lorenzo; Carr, Dennis; Collins, Jeff; Cunningham, Mark F; Habte Ghebretatios, Frezghi; Karnowski, Thomas Paul; Marchant, William

    2008-01-01

    We have constructed a unique instrument for use in the search for orphan sources. The system uses gamma-ray imaging to "see through" the natural background variations that effectively limit the search range of normal devices to ~10 m. The imager is mounted in a 4.9- m-long trailer and can be towed by a large personal vehicle. Source locations are determined both in range and along the direction of travel as the vehicle moves. A fully inertial platform coupled to a Global Positioning System receiver is used to map the gamma-ray images onto overhead geospatial imagery. The resulting images provide precise source locations, allowing rapid follow-up work. The instrument simultaneously searches both sides of the street to a distance of 50 m (100-m swath) for milliCurieclass sources with near-perfect performance.

  17. SimITK: visual programming of the ITK image-processing library within Simulink.

    PubMed

    Dickinson, Andrew W L; Abolmaesumi, Purang; Gobbi, David G; Mousavi, Parvin

    2014-04-01

    The Insight Segmentation and Registration Toolkit (ITK) is a software library used for image analysis, visualization, and image-guided surgery applications. ITK is a collection of C++ classes that poses the challenge of a steep learning curve should the user not have appropriate C++ programming experience. To remove the programming complexities and facilitate rapid prototyping, an implementation of ITK within a higher-level visual programming environment is presented: SimITK. ITK functionalities are automatically wrapped into "blocks" within Simulink, the visual programming environment of MATLAB, where these blocks can be connected to form workflows: visual schematics that closely represent the structure of a C++ program. The heavily templated C++ nature of ITK does not facilitate direct interaction between Simulink and ITK; an intermediary is required to convert respective data types and allow intercommunication. As such, a SimITK "Virtual Block" has been developed that serves as a wrapper around an ITK class which is capable of resolving the ITK data types to native Simulink data types. Part of the challenge surrounding this implementation involves automatically capturing and storing the pertinent class information that need to be refined from an initial state prior to being reflected within the final block representation. The primary result from the SimITK wrapping procedure is multiple Simulink block libraries. From these libraries, blocks are selected and interconnected to demonstrate two examples: a 3D segmentation workflow and a 3D multimodal registration workflow. Compared to their pure-code equivalents, the workflows highlight ITK usability through an alternative visual interpretation of the code that abstracts away potentially confusing technicalities.

  18. Combination of Multiple Spectral Libraries Improves the Current Search Methods Used to Identify Missing Proteins in the Chromosome-Centric Human Proteome Project.

    PubMed

    Cho, Jin-Young; Lee, Hyoung-Joo; Jeong, Seul-Ki; Kim, Kwang-Youl; Kwon, Kyung-Hoon; Yoo, Jong Shin; Omenn, Gilbert S; Baker, Mark S; Hancock, William S; Paik, Young-Ki

    2015-12-04

    Approximately 2.9 billion long base-pair human reference genome sequences are known to encode some 20 000 representative proteins. However, 3000 proteins, that is, ~15% of all proteins, have no or very weak proteomic evidence and are still missing. Missing proteins may be present in rare samples in very low abundance or be only temporarily expressed, causing problems in their detection and protein profiling. In particular, some technical limitations cause missing proteins to remain unassigned. For example, current mass spectrometry techniques have high limits and error rates for the detection of complex biological samples. An insufficient proteome coverage in a reference sequence database and spectral library also raises major issues. Thus, the development of a better strategy that results in greater sensitivity and accuracy in the search for missing proteins is necessary. To this end, we used a new strategy, which combines a reference spectral library search and a simulated spectral library search, to identify missing proteins. We built the human iRefSPL, which contains the original human reference spectral library and additional peptide sequence-spectrum match entries from other species. We also constructed the human simSPL, which contains the simulated spectra of 173 907 human tryptic peptides determined by MassAnalyzer (version 2.3.1). To prove the enhanced analytical performance of the combination of the human iRefSPL and simSPL methods for the identification of missing proteins, we attempted to reanalyze the placental tissue data set (PXD000754). The data from each experiment were analyzed using PeptideProphet, and the results were combined using iProphet. For the quality control, we applied the class-specific false-discovery rate filtering method. All of the results were filtered at a false-discovery rate of <1% at the peptide and protein levels. The quality-controlled results were then cross-checked with the neXtProt DB (2014-09-19 release). The two

  19. Global Image Dissimilarity in Macaque Inferotemporal Cortex Predicts Human Visual Search Efficiency

    PubMed Central

    Sripati, Arun P.; Olson, Carl R.

    2010-01-01

    Finding a target in a visual scene can be easy or difficult depending on the nature of the distractors. Research in humans has suggested that search is more difficult the more similar the target and distractors are to each other. However, it has not yielded an objective definition of similarity. We hypothesized that visual search performance depends on similarity as determined by the degree to which two images elicit overlapping patterns of neuronal activity in visual cortex. To test this idea, we recorded from neurons in monkey inferotemporal cortex (IT) and assessed visual search performance in humans using pairs of images formed from the same local features in different global arrangements. The ability of IT neurons to discriminate between two images was strongly predictive of the ability of humans to discriminate between them during visual search, accounting overall for 90% of the variance in human performance. A simple physical measure of global similarity – the degree of overlap between the coarse footprints of a pair of images – largely explains both the neuronal and the behavioral results. To explain the relation between population activity and search behavior, we propose a model in which the efficiency of global oddball search depends on contrast-enhancing lateral interactions in high-order visual cortex. PMID:20107054

  20. An adaptive image enhancement technique by combining cuckoo search and particle swarm optimization algorithm.

    PubMed

    Ye, Zhiwei; Wang, Mingwei; Hu, Zhengbing; Liu, Wei

    2015-01-01

    Image enhancement is an important procedure of image processing and analysis. This paper presents a new technique using a modified measure and blending of cuckoo search and particle swarm optimization (CS-PSO) for low contrast images to enhance image adaptively. In this way, contrast enhancement is obtained by global transformation of the input intensities; it employs incomplete Beta function as the transformation function and a novel criterion for measuring image quality considering three factors which are threshold, entropy value, and gray-level probability density of the image. The enhancement process is a nonlinear optimization problem with several constraints. CS-PSO is utilized to maximize the objective fitness criterion in order to enhance the contrast and detail in an image by adapting the parameters of a novel extension to a local enhancement technique. The performance of the proposed method has been compared with other existing techniques such as linear contrast stretching, histogram equalization, and evolutionary computing based image enhancement methods like backtracking search algorithm, differential search algorithm, genetic algorithm, and particle swarm optimization in terms of processing time and image quality. Experimental results demonstrate that the proposed method is robust and adaptive and exhibits the better performance than other methods involved in the paper.

  1. Similarity searching for chest CT images based on object features and spatial relation maps.

    PubMed

    Yu, Sung-Nien; Chiang, Chih-Tsung

    2004-01-01

    In this paper, an object-based image retrieval system for chest CT image databases is proposed. Based on the scheme of the content-based image retrieval method, we proposed an image segmentation method which combines the anatomical knowledge of the chest and the well-known watershed segmentation algorithm. The purpose of segmentation is to identify the mediastinum and the two lung lobes in a chest CT image. The ARGs (attributed relational graphs) are chosen to describe the features of segmented objects. Then, image database is constructed by the feature vectors of images. In database searching, two searching modes are provided that are "query by example" and "query by object". Our system uses Euclidean distance to measure the similarity between the image in query and the image in database. The system output the 30 most similar images in the chest CT image database as query results. The experimental results show that the average precision of our system is about 80% which is impressive in a totally automatic medical image retrieval system. Moreover, query concentrated in certain objects features usually show better result than the regular query by example. The possible reasons are discussed.

  2. Optimized multilevel codebook searching algorithm for vector quantization in image coding

    NASA Astrophysics Data System (ADS)

    Cao, Hugh Q.; Li, Weiping

    1996-02-01

    An optimized multi-level codebook searching algorithm (MCS) for vector quantization is presented in this paper. Although it belongs to the category of the fast nearest neighbor searching (FNNS) algorithms for vector quantization, the MCS algorithm is not a variation of any existing FNNS algorithms (such as k-d tree searching algorithm, partial-distance searching algorithm, triangle inequality searching algorithm...). A multi-level search theory has been introduced. The problem for the implementation of this theory has been solved by a specially defined irregular tree structure which can be built from a training set. This irregular tree structure is different from any tree structures used in TSVQ, prune tree VQ, quad tree VQ... Strictly speaking, it cannot be called tree structure since it allows one node has more than one set of parents, it is only a directed graph. This is the essential difference between MCS algorithm and other TSVQ algorithms which ensures its better performance. An efficient design procedure has been given to find the optimized irregular tree for practical source. The simulation results of applying MCS algorithm to image VQ show that this algorithm can reduce searching complexity to less than 3% of the exhaustive search vector quantization (ESVQ) (4096 codevectors and 16 dimension) while introducing negligible error (0.064 dB degradation from ESVQ). Simulation results also show that the searching complexity is close linearly increase with bitrate.

  3. Pattern Recognition-Assisted Infrared Library Searching of the Paint Data Query Database to Enhance Lead Information from Automotive Paint Trace Evidence.

    PubMed

    Lavine, Barry K; White, Collin G; Allen, Matthew D; Weakley, Andrew

    2017-03-01

    Multilayered automotive paint fragments, which are one of the most complex materials encountered in the forensic science laboratory, provide crucial links in criminal investigations and prosecutions. To determine the origin of these paint fragments, forensic automotive paint examiners have turned to the paint data query (PDQ) database, which allows the forensic examiner to compare the layer sequence and color, texture, and composition of the sample to paint systems of the original equipment manufacturer (OEM). However, modern automotive paints have a thin color coat and this layer on a microscopic fragment is often too thin to obtain accurate chemical and topcoat color information. A search engine has been developed for the infrared (IR) spectral libraries of the PDQ database in an effort to improve discrimination capability and permit quantification of discrimination power for OEM automotive paint comparisons. The similarity of IR spectra of the corresponding layers of various records for original finishes in the PDQ database often results in poor discrimination using commercial library search algorithms. A pattern recognition approach employing pre-filters and a cross-correlation library search algorithm that performs both a forward and backward search has been used to significantly improve the discrimination of IR spectra in the PDQ database and thus improve the accuracy of the search. This improvement permits inter-comparison of OEM automotive paint layer systems using the IR spectra alone. Such information can serve to quantify the discrimination power of the original automotive paint encountered in casework and further efforts to succinctly communicate trace evidence to the courts.

  4. Distraction in diagnostic radiology: How is search through volumetric medical images affected by interruptions?

    PubMed

    Williams, Lauren H; Drew, Trafton

    2017-01-01

    Observational studies have shown that interruptions are a frequent occurrence in diagnostic radiology. The present study used an experimental design in order to quantify the cost of these interruptions during search through volumetric medical images. Participants searched through chest CT scans for nodules that are indicative of lung cancer. In half of the cases, search was interrupted by a series of true or false math equations. The primary cost of these interruptions was an increase in search time with no corresponding increase in accuracy or lung coverage. This time cost was not modulated by the difficulty of the interruption task or an individual's working memory capacity. Eye-tracking suggests that this time cost was driven by impaired memory for which regions of the lung were searched prior to the interruption. Potential interventions will be discussed in the context of these results.

  5. What Can Pictures Tell Us About Web Pages? Improving Document Search Using Images.

    PubMed

    Rodriguez-Vaamonde, Sergio; Torresani, Lorenzo; Fitzgibbon, Andrew W

    2015-06-01

    Traditional Web search engines do not use the images in the HTML pages to find relevant documents for a given query. Instead, they typically operate by computing a measure of agreement between the keywords provided by the user and only the text portion of each page. In this paper we study whether the content of the pictures appearing in a Web page can be used to enrich the semantic description of an HTML document and consequently boost the performance of a keyword-based search engine. We present a Web-scalable system that exploits a pure text-based search engine to find an initial set of candidate documents for a given query. Then, the candidate set is reranked using visual information extracted from the images contained in the pages. The resulting system retains the computational efficiency of traditional text-based search engines with only a small additional storage cost needed to encode the visual information. We test our approach on one of the TREC Million Query Track benchmarks where we show that the exploitation of visual content yields improvement in accuracies for two distinct text-based search engines, including the system with the best reported performance on this benchmark. We further validate our approach by collecting document relevance judgements on our search results using Amazon Mechanical Turk. The results of this experiment confirm the improvement in accuracy produced by our image-based reranker over a pure text-based system.

  6. Study on Human Recognition by Ear Image Based on Genetic Local Search

    NASA Astrophysics Data System (ADS)

    Wang, Yu; Tsurusawa, Hidenobu; Yuizono, Takaya; Sato, Kiminori; Nakayama, Shigeru

    An individual recognition system using the genetic local search with respect to ear images has been examined. We generated a set of individuals which are ramdomly selected from the ear images consisted of 50 registrants, and carried out genetic operations to the set of the individuals in order to lead to new generation. The local search is applied to some top elites with the best fitnesses in the new generation. The best fitness is searched between some positions selected near the elite position. Individual recognition experiment using the ear image with the uncertain data was carried out in respect of the method. As the result, it is noted that the registrant recognition rate was 100 percent, and it became 100 percent, at the un-registrant denial rate.

  7. A neotropical Miocene pollen database employing image-based search and semantic modeling1

    PubMed Central

    Han, Jing Ginger; Cao, Hongfei; Barb, Adrian; Punyasena, Surangi W.; Jaramillo, Carlos; Shyu, Chi-Ren

    2014-01-01

    • Premise of the study: Digital microscopic pollen images are being generated with increasing speed and volume, producing opportunities to develop new computational methods that increase the consistency and efficiency of pollen analysis and provide the palynological community a computational framework for information sharing and knowledge transfer. • Methods: Mathematical methods were used to assign trait semantics (abstract morphological representations) of the images of neotropical Miocene pollen and spores. Advanced database-indexing structures were built to compare and retrieve similar images based on their visual content. A Web-based system was developed to provide novel tools for automatic trait semantic annotation and image retrieval by trait semantics and visual content. • Results: Mathematical models that map visual features to trait semantics can be used to annotate images with morphology semantics and to search image databases with improved reliability and productivity. Images can also be searched by visual content, providing users with customized emphases on traits such as color, shape, and texture. • Discussion: Content- and semantic-based image searches provide a powerful computational platform for pollen and spore identification. The infrastructure outlined provides a framework for building a community-wide palynological resource, streamlining the process of manual identification, analysis, and species discovery. PMID:25202648

  8. Hybrid Imaging-Periodicity Search for Radio Pulsars: A Pilot VLA Survey

    NASA Astrophysics Data System (ADS)

    Finn, Molly; Wharton, Robert; Chatterjee, Shami; Cordes, James M.; Kaplan, David L. A.; Burke-Spolaor, Sarah; Crawford, Fronefield; Deller, Adam; Lazio, Joseph; Ransom, Scott M.

    2015-01-01

    Almost all of the ~2300 known pulsars have been discovered using the standard period-dispersion measure (P-DM) search. In a P-DM search, time series intensity data are collected, de-dispersed for a set of trial DMs, and searched for periodic signals usually with frequency-domain algorithms but with fast-folding algorithms for long-period objects. Here we describe a hybrid imaging-periodicity search, an alternate method that uses an imaging survey to select radio point sources as pulsar candidates, followed by a deep P-DM search of these candidates using new or archival data. Since the hybrid search is largely conducted in the imaging domain of time-averaged intensities, it does not suffer reduced sensitivity (as the P-DM method does) when a pulsar signal is heavily modulated by orbital motion, pulse-broadened by scattering, or intermittently emitting (due to large-scale magnetospheric changes, eclipses, etc). As such, the hybrid method is sensitive to systems that are highly selected against in P-DM searches such as compact neutron star binaries, highly scattered millisecond pulsars, and pulsars with spin periods less than a millisecond (should they exist). Interferometric imaging also requires a lower significance threshold for detection than a periodicity search and is more robust against radio-frequency interference. We present preliminary results of a wide-field high dynamic range imaging survey conducted with the Jansky VLA at 1-2 GHz in a pilot program to test the efficacy of a hybrid imaging-periodicity search for radio pulsars in the Galactic plane. The survey region covers four square degrees (Galactic longitudes 32.5-36.5 degrees) using 38 pointings and overlaps with the Arecibo PALFA pulsar survey, which will be used as the periodicity component of our hybrid search. We analyze the observed properties of the 23 known radio pulsars in the survey region and discuss the implications for the selection process needed to narrow the thousands of detected

  9. Simultaneous screening of targeted and non-targeted contaminants using an LC-QTOF-MS system and automated MS/MS library searching.

    PubMed

    Herrera-Lopez, S; Hernando, M D; García-Calvo, E; Fernández-Alba, A R; Ulaszewska, M M

    2014-09-01

    Simultaneous high-resolution full-scan and tandem mass spectrometry (MS/MS) analysis using time of flight mass spectrometry brings an answer for increasing demand of retrospective and non-targeted data analysis. Such analysis combined with spectral library searching is a promising tool for targeted and untargeted screening of small molecules. Despite considerable extension of the panel of compounds of tandem mass spectral libraries, the heterogeneity of spectral data poses a major challenge against the effective usage of spectral libraries. Performance evaluation of available LC-MS/MS libraries will significantly increase credibility in the search results. The present work was aimed to evaluate fluctuation of MS/MS pattern, in the peak intensities distribution together with mass accuracy measurements, and in consequence, performance compliant with ion ratio and mass error criteria as principles in identification processes for targeted and untargeted contaminants at trace levels. Matrix effect and ultra-trace levels of concentration (from 50 ng l(-1) to 1000 ng l(-1) were evaluated as potential source of inaccuracy in the performance of spectral matching. Matrix-matched samples and real samples were screened for proof of applicability. By manual review of data and application of ion ratio and ppm error criteria, false negatives were obtained; this number diminished when in-house library was used, while with on-line MS/MS databases 100% of positive samples were found. In our experience, intensity of peaks across spectra was highly correlated to the concentration effect and matrix complexity. In turn, analysis of spectra acquired at trace concentrations and in different matrices results in better performance in providing correct and reliable identification.

  10. Visual-search observers for assessing tomographic x-ray image quality

    PubMed Central

    Gifford, Howard C.; Liang, Zhihua; Das, Mini

    2016-01-01

    Purpose: Mathematical model observers commonly used for diagnostic image-quality assessments in x-ray imaging research are generally constrained to relatively simple detection tasks due to their need for statistical prior information. Visual-search (VS) model observers that employ morphological features in sequential search and analysis stages have less need for such information and fewer task constraints. The authors compared four VS observers against human observers and an existing scanning model observer in a pilot study that quantified how mass detection and localization in simulated digital breast tomosynthesis (DBT) can be affected by the number P of acquired projections. Methods: Digital breast phantoms with embedded spherical masses provided single-target cases for a localization receiver operating characteristic (LROC) study. DBT projection sets based on an acquisition arc of 60° were generated for values of P between 3 and 51. DBT volumes were reconstructed using filtered backprojection with a constant 3D Butterworth postfilter; extracted 2D slices were used as test images. Three imaging physicists participated as observers. A scanning channelized nonprewhitening (CNPW) observer had knowledge of the mean lesion-absent images. The VS observers computed an initial single-feature search statistic that identified candidate locations as local maxima of either a template matched-filter (MF) image or a gradient-template MF (GMF) image. Search inefficiencies that modified the statistic were also considered. Subsequent VS candidate analyses were carried out with (i) the CNPW statistical discriminant and (ii) the discriminant computed from GMF training images. These location-invariant discriminants did not utilize covariance information. All observers read 36 training images and 108 study images per P value. Performance was scored in terms of area under the LROC curve. Results: Average human-observer performance was stable for P between 7 and 35. In the absence of

  11. Multi-scale saliency search in image analysis.

    SciTech Connect

    Slepoy, Alexander; Campisi, Anthony; Backer, Alejandro

    2005-10-01

    Saliency detection in images is an important outstanding problem both in machine vision design and the understanding of human vision mechanisms. Recently, seminal work by Itti and Koch resulted in an effective saliency-detection algorithm. We reproduce the original algorithm in a software application Vision and explore its limitations. We propose extensions to the algorithm that promise to improve performance in the case of difficult-to-detect objects.

  12. Rotating Modulation Imager for the Orphan Source Search Problem

    DTIC Science & Technology

    2008-01-01

    gamma camera for this application because of its ability to produce high resolution images over a large energy range (0.4-6.5 MeV for NSECT). The...is within the set energy window will trigger the generation of a 5 volt logic pulse. This logic pulse is then sent to a National Instruments data...acquisition board that counts the logic pulses as they are generated. Figure 3-4. Block diagram of the RMC data acquisition system. As

  13. Handbook To Facilitate Faculty Awareness of Library Resources and Services: One Library's Initial Response to the College of Business Administration's Search for AACSB Accreditation.

    ERIC Educational Resources Information Center

    Earle, Katherine Weeks

    Created by the College of Business Administration (COBA) and the libraries of the University of Northern Colorado, this 1988-89 handbook was part of a strategic plan to achieve initial accreditation by the American Assembly of Collegiate Schools of Business (AACSB). Constructed by the reference librarian who works directly with COBA, the handbook…

  14. A Multimodal Search Engine for Medical Imaging Studies.

    PubMed

    Pinho, Eduardo; Godinho, Tiago; Valente, Frederico; Costa, Carlos

    2017-02-01

    The use of digital medical imaging systems in healthcare institutions has increased significantly, and the large amounts of data in these systems have led to the conception of powerful support tools: recent studies on content-based image retrieval (CBIR) and multimodal information retrieval in the field hold great potential in decision support, as well as for addressing multiple challenges in healthcare systems, such as computer-aided diagnosis (CAD). However, the subject is still under heavy research, and very few solutions have become part of Picture Archiving and Communication Systems (PACS) in hospitals and clinics. This paper proposes an extensible platform for multimodal medical image retrieval, integrated in an open-source PACS software with profile-based CBIR capabilities. In this article, we detail a technical approach to the problem by describing its main architecture and each sub-component, as well as the available web interfaces and the multimodal query techniques applied. Finally, we assess our implementation of the engine with computational performance benchmarks.

  15. A survey of medical students on the impact of a new digital imaging library in the dissection room.

    PubMed

    Turmezei, T D; Tam, M D B S; Loughna, S

    2009-09-01

    Radiology has a recognised role in undergraduate anatomy education. The recent digitalisation of radiology has created new learning opportunities involving techniques such as image labelling, 3D reconstruction, and multiplanar reformatting. An opportunity was identified at the University of Nottingham to create a digital library of normal radiology images as a learner-driven adjunct in anatomy dissection sessions. We describe the process of creating a de novo digital library by sourcing images for presentation at computer workstations. Students' attitudes towards this new resource were assessed using a questionnaire which used a 5 point Likert scale and also offered free text responses. One hundred and forty-one out of 260 students (54%) completed the questionnaire. The most notable findings were: a positive response to the relevance of imaging to the session topics (median score 4), strong agreement that images should be available on the university website (median score 5), and disagreement that enough workstations were available (median score 2). About 24% of respondents suggested independently that images needed more labeling to help with orientation and identification. This first phase of supplying a comprehensive imaging library can be regarded as a success. Increasing availability and incorporating dynamic labeling are well recognized as important design concepts for electronic learning resources and these will be improved in the second phase of delivery as a direct result of student feedback. Hopefully other centers can benefit from this experience and will consider such a venture to be worthwhile.

  16. Thermal Image Sensing Model for Robotic Planning and Search

    PubMed Central

    Castro Jiménez, Lídice E.; Martínez-García, Edgar A.

    2016-01-01

    This work presents a search planning system for a rolling robot to find a source of infra-red (IR) radiation at an unknown location. Heat emissions are observed by a low-cost home-made IR passive visual sensor. The sensor capability for detection of radiation spectra was experimentally characterized. The sensor data were modeled by an exponential model to estimate the distance as a function of the IR image’s intensity, and, a polynomial model to estimate temperature as a function of IR intensities. Both theoretical models are combined to deduce a subtle nonlinear exact solution via distance-temperature. A planning system obtains feed back from the IR camera (position, intensity, and temperature) to lead the robot to find the heat source. The planner is a system of nonlinear equations recursively solved by a Newton-based approach to estimate the IR-source in global coordinates. The planning system assists an autonomous navigation control in order to reach the goal and avoid collisions. Trigonometric partial differential equations were established to control the robot’s course towards the heat emission. A sine function produces attractive accelerations toward the IR source. A cosine function produces repulsive accelerations against the obstacles observed by an RGB-D sensor. Simulations and real experiments of complex indoor are presented to illustrate the convenience and efficacy of the proposed approach. PMID:27509510

  17. Search for Exoplanets around Young Stellar Objects by Direct Imaging

    NASA Astrophysics Data System (ADS)

    Uyama, Taichi; Tamura, Motohide; Hashimoto, Jun; Kuzuhara, Masayuki

    2015-12-01

    SEEDS project, exploring exoplanets and protoplanetary disks with Subaru/HiCIAO, has observed about 500 stars by Direct Imaging from 2009 Dec to 2015 Apr. Among these targets we explore around Young Stellar Objects (YSOs; age ≦ 10Myr) which often have the protoplanetary disks where planets are being formed in order to detect young exoplanets and to understand the formation process. We analyzed 66 YSOs (about 100 data in total) with LOCI data reduction. We will report the results (companion candidates and detection limit) of our exploration.

  18. Selective Search and Intensity Context Based Retina Vessel Image Segmentation.

    PubMed

    Tang, Zhaohui; Zhang, Jin; Gui, Weihua

    2017-03-01

    In the framework of computer-aided diagnosis of eye disease, a new contextual image feature named influence degree of average intensity is proposed for retinal vessel image segmentation. This new feature evaluates the influence degree of current detected pixel decreasing the average intensity of the local row where that pixel located. Firstly, Hessian matrix is introduced to detect candidate regions, for the reason of accelerating segmentation. Then, the influence degree of average intensity of each pixel is extracted. Next, contextual feature vector for each pixel is constructed by concatenating the 8 feature neighbors. Finally, a classifier is built to classify each pixel into vessel or non-vessel based on its contextual feature. The effectiveness of the proposed method is demonstrated through receiver operating characteristic analysis on the benchmarked databases of DRIVE and STARE. Experiment results show that our method is comparable with the state-of-the-art methods. For example, the average accuracy, sensitivity, specificity achieved on the database DRIVE and STARE are 0.9611, 0.8174, 0.9747 and 0.9547, 0.7768, 0.9751, respectively.

  19. Searching for novel biomarkers using high resolution diffusion tensor imaging.

    PubMed

    Yassa, Michael A

    2011-01-01

    Diffusion tensor imaging is capable of resolving large fiber bundles (e.g. the corpus callosum) and has been quite informative in understanding the overall structural connectivity of the brain. Recent data has shown that traditional resolution limitations can be exceeded in humans in vivo to submillimeter resolution. This chapter discusses these new techniques, and specific applications to small pathways such as the perforant path in the medial temporal lobe. High-resolution diffusion tensor imaging is a promising new tool that can be used to discover novel biomarkers for Alzheimer's disease and other disorders. It allows for a much more detailed investigation of brain white matter than previously possible, perhaps offering clues into the first signs of synaptic deterioration that may precede frank neuron loss. Although these methods are still in their infancy and many challenges have to be overcome before they can be used in a clinical fashion, results so far have been promising. Challenges and future directions are discussed in detail.

  20. Cathodoluminescence : an imaging technique for the search of extraterrestrial life

    NASA Astrophysics Data System (ADS)

    Ramboz, C.; Rubert, Y.; Bost, N.; Westall, F.; Lerouge, C.

    2012-04-01

    Solids irradiated by a 10-20 keV electron beam emit ligth in the UV-visible range, which is called cathodoluminescence (CL). CL imagery is a powerful tool for visualizing minerals and their internal structures (lattice defects, zoning). For example, terrestrial calcite, either of sedimentary or biogenic origin, often display a bright orange CL, as a result of the incorporation of trace Mn2+ in its lattice. Aragonite can also be discriminated from calcite by its green CL. Carbonates are a major target for the search of life on Mars, and CL imagery could contribute to reveal carbonates in situ. Thomas et al. [1] have validated the concept of an electron lamp to make CL imagery of a rock surface placed in a martian CO2 atmosphere. We present 2 examples of terrestrial bacterial microstructures that are revealed by CL. (1) In Sinemurian sediments from the Montmiral borehole (Valence Basin, France), banded wavy calcite in contact with pyrite represents fossilized biofilms of sulfato-reducing bacteria, as confirmed by the sulfur isotopic composition of pyrite ~+36 %0 PDB. (2) At l'Ile Crémieux, north of the Valence basin, a dense filamentous microbial/fungal community with a bright orange CL signature is embedded in vuggy calcite from a tectonic vein. The mat is anchored 1-2 mm deep in the oolitic veinwall and emerges at right angle in the 'open' fracture space. Finally, carbonate vesicles and exhalite crusts from the Svalbard basalt in Groendland, with orange CL, are shown as analogues to carbonates from the martian ALH84001 igneous meteorite. [1]Thomas et al. (2009) in A. Gucsik (Ed.) "Cathodoluminescence and Its Application in the Planetary Sciences"

  1. Accounting for anatomical noise in search-capable model observers for planar nuclear imaging

    PubMed Central

    Sen, Anando; Gifford, Howard C.

    2016-01-01

    Abstract. Model observers intended to predict the diagnostic performance of human observers should account for the effects of both quantum and anatomical noise. We compared the abilities of several visual-search (VS) and scanning Hotelling-type models to account for anatomical noise in a localization receiver operating characteristic (LROC) study involving simulated nuclear medicine images. Our VS observer invoked a two-stage process of search and analysis. The images featured lesions in the prostate and pelvic lymph nodes. Lesion contrast and the geometric resolution and sensitivity of the imaging collimator were the study variables. A set of anthropomorphic mathematical phantoms was imaged with an analytic projector based on eight parallel-hole collimators with different sensitivity and resolution properties. The LROC study was conducted with human observers and the channelized nonprewhitening, channelized Hotelling (CH) and VS model observers. The CH observer was applied in a “background-known-statistically” protocol while the VS observer performed a quasi-background-known-exactly task. Both of these models were applied with and without internal noise in the decision variables. A perceptual search threshold was also tested with the VS observer. The model observers without inefficiencies failed to mimic the average performance trend for the humans. The CH and VS observers with internal noise matched the humans primarily at low collimator sensitivities. With both internal noise and the search threshold, the VS observer attained quantitative agreement with the human observers. Computational efficiency is an important advantage of the VS observer. PMID:26835503

  2. Developing a Web Tool for Searching and Viewing Collections of High-Quality Cultural Images

    ERIC Educational Resources Information Center

    Lazarinis, Fotis

    2010-01-01

    Purpose: Searching for information and viewing visual representations of products in e-organisations is a common activity of the e-visitors to these organisations. For example, in e-museums, users are shown images or other visual information of the existing objects. The aim of this paper is to present a tool which supports the effective searching…

  3. Arc-An OAI Service Provider for Digital Library Federation; Kepler-An OAI Data/Service Provider for the Individual; Information Objects and Rights Management: A Mediation-Based Approach to DRM Interoperability; Automated Name Authority Control and Enhanced Searching in the Levy Collection; Renardus Project Developments and the Wider Digital Library Context.

    ERIC Educational Resources Information Center

    Liu, Xiaoming; Maly, Kurt; Zubair, Mohammad; Nelson, Michael L.; Erickson, John S.; DiLauro, Tim; Choudhury, G. Sayeed; Patton, Mark; Warner, James W.; Brown, Elizabeth W.; Heery, Rachel; Carpenter, Leona; Day, Michael

    2001-01-01

    Includes five articles that discuss the OAI (Open Archive Initiative), an interface between data providers and service providers; information objects and digital rights management interoperability; digitizing library collections, including automated name authority control, metadata, and text searching engines; and building digital library services…

  4. Direct Imaging Search for Extrasolar Planets in the Pleiades

    NASA Technical Reports Server (NTRS)

    Yamamoto, Kodai; Matsuo, Taro; Shibai, Hiroshi; Itoh, Yoichi; Konishi, Mihokko; Sudo, Jun; Tanii, Ryoko; Fukagawa, Misato; Sumi, Takahiro; Kudo, Tomoyuki; Hashimoto, Jun; Kusakabe, Nobuhiko; Abe, Lyn; Brandner, Wolfgang; Brandt, Timothy D.; Carson, Joseph; Currie, Thayne; Egner, Sebastian E,; Feldt, Markus; Goto, Miwa; Grady, Carol; Guyon, Olivier; Hayano, Yutaka; McElwain, Mike; Serabyn, Eugene

    2013-01-01

    We carried out an imaging survey for extrasolar planets around stars in the Pleiades (125 Myr, 135 pc) in the H and K(sub S) bands using HiCIAO combined with adaptive optics, AO188, on the Subaru telescope. We found 13 companion candidates fainter than 14.5 mag in the H band around 9 stars. Five of these 13 were confirmed to be background stars by measurement of their proper motion. One was not found in the second epoch observation, and thus was not a background or companion object. One had multi-epoch images, but the precision of its proper motion was not sufficient to conclude whether it was a background object. Four other candidates are waiting for second-epoch observations to determine their proper motion. Finally, the remaining two were confirmed to be 60 M(sub J) brown dwarf companions orbiting around HD 23514 (G0) and HII 1348 (K5), respectively, as had been reported in previous studies. In our observations, the average detection limit for a point source was 20.3 mag in the H band beyond 1.'' 5 from the central star. On the basis of this detection limit, we calculated the detection efficiency to be 90% for a planet with 6 to 12 Jovian masses and a semi-major axis of 50–1000 AU. For this reason we extrapolated the distribution of the planet mass and the semi-major axis derived from radial velocity observations, and adopted the planet evolution model Baraffe et al. (2003, A&A, 402, 701). Since there was no detection of a planet, we estimated the frequency of such planets to be less than 17.9% (2 sigma) around one star of the Pleiades cluster.

  5. Cuckoo search algorithm based satellite image contrast and brightness enhancement using DWT-SVD.

    PubMed

    Bhandari, A K; Soni, V; Kumar, A; Singh, G K

    2014-07-01

    This paper presents a new contrast enhancement approach which is based on Cuckoo Search (CS) algorithm and DWT-SVD for quality improvement of the low contrast satellite images. The input image is decomposed into the four frequency subbands through Discrete Wavelet Transform (DWT), and CS algorithm used to optimize each subband of DWT and then obtains the singular value matrix of the low-low thresholded subband image and finally, it reconstructs the enhanced image by applying IDWT. The singular value matrix employed intensity information of the particular image, and any modification in the singular values changes the intensity of the given image. The experimental results show superiority of the proposed method performance in terms of PSNR, MSE, Mean and Standard Deviation over conventional and state-of-the-art techniques.

  6. Segmentation of MRI Brain Images with an Improved Harmony Searching Algorithm

    PubMed Central

    Yang, Zhang; Li, Guo; Weifeng, Ding

    2016-01-01

    The harmony searching (HS) algorithm is a kind of optimization search algorithm currently applied in many practical problems. The HS algorithm constantly revises variables in the harmony database and the probability of different values that can be used to complete iteration convergence to achieve the optimal effect. Accordingly, this study proposed a modified algorithm to improve the efficiency of the algorithm. First, a rough set algorithm was employed to improve the convergence and accuracy of the HS algorithm. Then, the optimal value was obtained using the improved HS algorithm. The optimal value of convergence was employed as the initial value of the fuzzy clustering algorithm for segmenting magnetic resonance imaging (MRI) brain images. Experimental results showed that the improved HS algorithm attained better convergence and more accurate results than those of the original HS algorithm. In our study, the MRI image segmentation effect of the improved algorithm was superior to that of the original fuzzy clustering method. PMID:27403428

  7. Segmentation of MRI Brain Images with an Improved Harmony Searching Algorithm.

    PubMed

    Yang, Zhang; Shufan, Ye; Li, Guo; Weifeng, Ding

    2016-01-01

    The harmony searching (HS) algorithm is a kind of optimization search algorithm currently applied in many practical problems. The HS algorithm constantly revises variables in the harmony database and the probability of different values that can be used to complete iteration convergence to achieve the optimal effect. Accordingly, this study proposed a modified algorithm to improve the efficiency of the algorithm. First, a rough set algorithm was employed to improve the convergence and accuracy of the HS algorithm. Then, the optimal value was obtained using the improved HS algorithm. The optimal value of convergence was employed as the initial value of the fuzzy clustering algorithm for segmenting magnetic resonance imaging (MRI) brain images. Experimental results showed that the improved HS algorithm attained better convergence and more accurate results than those of the original HS algorithm. In our study, the MRI image segmentation effect of the improved algorithm was superior to that of the original fuzzy clustering method.

  8. Cross-indexing of binary SIFT codes for large-scale image search.

    PubMed

    Liu, Zhen; Li, Houqiang; Zhang, Liyan; Zhou, Wengang; Tian, Qi

    2014-05-01

    In recent years, there has been growing interest in mapping visual features into compact binary codes for applications on large-scale image collections. Encoding high-dimensional data as compact binary codes reduces the memory cost for storage. Besides, it benefits the computational efficiency since the computation of similarity can be efficiently measured by Hamming distance. In this paper, we propose a novel flexible scale invariant feature transform (SIFT) binarization (FSB) algorithm for large-scale image search. The FSB algorithm explores the magnitude patterns of SIFT descriptor. It is unsupervised and the generated binary codes are demonstrated to be dispreserving. Besides, we propose a new searching strategy to find target features based on the cross-indexing in the binary SIFT space and original SIFT space. We evaluate our approach on two publicly released data sets. The experiments on large-scale partial duplicate image retrieval system demonstrate the effectiveness and efficiency of the proposed algorithm.

  9. Random walks with efficient search and contextually adapted image similarity for deformable registration.

    PubMed

    Tang, Lisa Y W; Hamarneh, Ghassan

    2013-01-01

    We develop a random walk-based image registration method that incorporates two novelties: 1) a progressive optimization scheme that conducts the solution search efficiently via a novel use of information derived from the obtained probabilistic solution, and 2) a data-likelihood re-weighting step that contextually performs feature selection in a spatially adaptive manner so that the data costs are based primarily on trusted information sources. Synthetic experiments on three public datasets of different anatomical regions and modalities showed that our method performed efficient search without sacrificing registration accuracy. Experiments performed on 60 real brain image pairs from a public dataset also demonstrated our method's better performance over existing non-probabilistic image registration methods.

  10. Missing pixels restoration for remote sensing images using adaptive search window and linear regression

    NASA Astrophysics Data System (ADS)

    Tai, Shen-Chuan; Chen, Peng-Yu; Chao, Chian-Yen

    2016-07-01

    The Consultative Committee for Space Data Systems proposed an efficient image compression standard that can do lossless compression (CCSDS-ICS). CCSDS-ICS is the most widely utilized standard for satellite communications. However, the original CCSDS-ICS is weak in terms of error resilience with even a single incorrect bit possibly causing numerous missing pixels. A restoration algorithm based on the neighborhood similar pixel interpolator is proposed to fill in missing pixels. The linear regression model is used to generate the reference image from other panchromatic or multispectral images. Furthermore, an adaptive search window is utilized to sieve out similar pixels from the pixels in the search region defined in the neighborhood similar pixel interpolator. The experimental results show that the proposed methods are capable of reconstructing missing regions with good visual quality.

  11. Optical Disc Technology and the Cooperative Television Library.

    ERIC Educational Resources Information Center

    Kranch, Douglas

    1989-01-01

    Discusses the feasibility of individual television film libraries combining film holdings onto optical disks and developing networks that would allow online searching of, access to, and transmission of video images. It is concluded that recent advances in technology would support fast and cost effective image retrieval with no loss in video…

  12. Bad Pixels, Cosmic Rays, and PSF-libraries from deep HST/WFC images

    NASA Astrophysics Data System (ADS)

    Franklin, B. E.; Duchene, N. S.; Schroeder, L. L.; Gordon, J. M.; Neuschaefer, L. W.; Windhorst, R. A.

    1992-12-01

    We present the careful removal of bad pixels and cosmic-ray (``CR'') events from HST/WFC images. The WFC bad-pixel map is known to vary with time, because the intense on-orbit CR-flux (see below) increases the dark-current of pixels that have been hit by CR's many times. This is not always properly reflected in the standard WFC dark-frames. We have thus begun a program to monitor and update ``new'' WFC bad pixels over time. Similarly, we present the construction of a library of PSF-stars from available Cycle 1 images across the WFC field-of-view in various filters. This will allow us to monitor the PSF's time- and focus-dependence, and to properly deconvolve objects seen in sub-sections of WFC images with no available nearby PSF-star (see our other HST AAS-posters this Volume). To assess the on-orbit cosmic-ray flux quantitatively, we constructed CR-clipped images from our 8---12 orbit WFC data-cube through an iterative local 2sigma -clip that uses and preserves the local S/N per pixel, and subtracted these from the straight image average. The resulting ``CR-images'' were processed with FOCAS using various detection thresholds. Differential CR ``magnitude-counts'' follow from their summed DN/unit time (as if all CR's had been misclassified as objects). The CR-``counts'' have a power-law slope gamma =~ 0.60 [N(m)~ m(gamma ) ]. At Gunn g=25 mag, the CR-``counts'' are ~ 1.0 dex higher in amplitude than the galaxy counts. They continue with a nearly ``Euclidean'' slope down to g=27.5 mag (our 1-sigma point source sensitivity), below which they turnover due to ``incompleteness'' and FOCAS splitting problems. Their formal sky-integral thus ``diverges'' into the noise, and their integral surface density approaches ~ 10(8) \\ deg(-2) down to g=28 mag, which corresponds to 1 out of every 12 pixels in the WFC data-cube, or an integrated sky-signal of at least V =~ 25.0--25.75 mag/arcsec(-2) . This work was supported by NASA/HST grants GO-2405-01-87A from STScI, which is

  13. Length-adaptive graph search for automatic segmentation of pathological features in optical coherence tomography images

    NASA Astrophysics Data System (ADS)

    Keller, Brenton; Cunefare, David; Grewal, Dilraj S.; Mahmoud, Tamer H.; Izatt, Joseph A.; Farsiu, Sina

    2016-07-01

    We introduce a metric in graph search and demonstrate its application for segmenting retinal optical coherence tomography (OCT) images of macular pathology. Our proposed "adjusted mean arc length" (AMAL) metric is an adaptation of the lowest mean arc length search technique for automated OCT segmentation. We compare this method to Dijkstra's shortest path algorithm, which we utilized previously in our popular graph theory and dynamic programming segmentation technique. As an illustrative example, we show that AMAL-based length-adaptive segmentation outperforms the shortest path in delineating the retina/vitreous boundary of patients with full-thickness macular holes when compared with expert manual grading.

  14. Development of a Navigator and Imaging Techniques for the Cryogenic Dark Matter Search Detectors

    SciTech Connect

    Wilen, Chris; /Carleton Coll. /KIPAC, Menlo Park

    2011-06-22

    This project contributes to the detection of flaws in the germanium detectors for the Cryogenic Dark Matter Search (CDMS) experiment. Specifically, after imaging the detector surface with a precise imaging and measuring device, they developed software to stitch the resulting images together, applying any necessary rotations, offsets, and averaging, to produce a smooth image of the whole detector that can be used to detect flaws on the surface of the detector. These images were also tiled appropriately for the Google Maps API to use as a navigation tool, allowing viewers to smoothly zoom and pan across the detector surface. Automated defect identification can now be implemented, increasing the scalability of the germanium detector fabrication.

  15. Report on the performance of a large-area, gamma-ray imager for search

    SciTech Connect

    Fabris, L; Ziock, K

    2005-10-07

    We are currently constructing a prototype, large-area, gamma-ray detector for conducting vehicle-mounted, mobile-search operations. The system is unique in that it relies on imaging to discriminate point sources of interest from the natural background variations. In a non-imaging instrument the background fluctuations mimic the signature seen from real sources at a distance and one is limited in sensitivity to detecting only those sources that overwhelm the local background variations --not just the counting statistics associated with a given measurement. The net result is that a larger detector is generally not more sensitive to detecting sources in the world at large. [1, 2] In a previous publication [3] we reported on the detection of a 1-mCi source at more than 80 meters from the detector using a proof-of-principle instrument (see Fig. 1) constructed to demonstrate how imaging removes the size limit on search instruments. In this report we document a systematic effort using the same detector to demonstrate that imaging detectors can reliably detect weak radiation sources at many 10's of meters. Specifically, we collected data on a 1-mCi {sup 137}Cs source 65 m from the path of the search instrument.

  16. BSIFT: toward data-independent codebook for large scale image search.

    PubMed

    Zhou, Wengang; Li, Houqiang; Hong, Richang; Lu, Yijuan; Tian, Qi

    2015-03-01

    Bag-of-Words (BoWs) model based on Scale Invariant Feature Transform (SIFT) has been widely used in large-scale image retrieval applications. Feature quantization by vector quantization plays a crucial role in BoW model, which generates visual words from the high- dimensional SIFT features, so as to adapt to the inverted file structure for the scalable retrieval. Traditional feature quantization approaches suffer several issues, such as necessity of visual codebook training, limited reliability, and update inefficiency. To avoid the above problems, in this paper, a novel feature quantization scheme is proposed to efficiently quantize each SIFT descriptor to a descriptive and discriminative bit-vector, which is called binary SIFT (BSIFT). Our quantizer is independent of image collections. In addition, by taking the first 32 bits out from BSIFT as code word, the generated BSIFT naturally lends itself to adapt to the classic inverted file structure for image indexing. Moreover, the quantization error is reduced by feature filtering, code word expansion, and query sensitive mask shielding. Without any explicit codebook for quantization, our approach can be readily applied in image search in some resource-limited scenarios. We evaluate the proposed algorithm for large scale image search on two public image data sets. Experimental results demonstrate the index efficiency and retrieval accuracy of our approach.

  17. Digital Libraries: An Overview.

    ERIC Educational Resources Information Center

    Schwartz, Candy

    2000-01-01

    Provides an overview of the basic components of a digital library. Highlights include library collections; metadata; services, including information seeking and retrieval, reference query fulfillment, and user training; user interaction with digital libraries, including searching, browsing, and navigation; economic support; maintenance;…

  18. Synthesis and systematic evaluation of dark resonance energy transfer (DRET)-based library and its application in cell imaging.

    PubMed

    Su, Dongdong; Teoh, Chai Lean; Kang, Nam-Young; Yu, Xiaotong; Sahu, Srikanta; Chang, Young-Tae

    2015-03-01

    In this paper, we report a new strategy for constructing a dye library with large Stokes shifts. By coupling a dark donor with BODIPY acceptors of tunable high quantum yield, a novel dark resonance energy transfer (DRET)-based library, named BNM, has been synthesized. Upon excitation of the dark donor (BDN) at 490 nm, the absorbed energy is transferred to the acceptor (BDM) with high efficiency, which was tunable in a broad range from 557 nm to 716 nm, with a high quantum yield of up to 0.8. It is noteworthy to mention that the majority of the non-radiative energy loss of the donor was converted into the acceptor's fluorescence output with a minimum leak of donor emission. Fluorescence imaging tested in live cells showed that the BNM compounds are cell-permeable and can also be employed for live-cell imaging. This is a new library which can be excited through a dark donor allowing for strong fluorescence emission in a wide range of wavelengths. Thus, the BNM library is well suited for high-throughput screening or multiplex experiments in biological applications by using a single laser excitation source.

  19. Evaluating the Impact of an Online Library Catalogue on Subject Searching Behaviour at the Catalogue and at the Shelves.

    ERIC Educational Resources Information Center

    Hancock-Beaulieu, Micheline

    1990-01-01

    Describes a study at the City University (London) that was conducted to evaluate the impact of an online catalog on subject searching behavior. Methods of using the catalog and browsing at the shelves are examined, and results are compared with an earlier study of subject searching with a manual PRECIS index. (25 references) (LRW)

  20. Keynote Talk: Mining the Web 2.0 for Improved Image Search

    NASA Astrophysics Data System (ADS)

    Baeza-Yates, Ricardo

    There are several semantic sources that can be found in the Web that are either explicit, e.g. Wikipedia, or implicit, e.g. derived from Web usage data. Most of them are related to user generated content (UGC) or what is called today the Web 2.0. In this talk we show how to use these sources of evidence in Flickr, such as tags, visual annotations or clicks, which represent the the wisdom of crowds behind UGC, to improve image search. These results are the work of the multimedia retrieval team at Yahoo! Research Barcelona and they are already being used in Yahoo! image search. This work is part of a larger effort to produce a virtuous data feedback circuit based on the right combination many different technologies to leverage the Web itself.

  1. Optimum wavelet based masking for the contrast enhancement of medical images using enhanced cuckoo search algorithm.

    PubMed

    Daniel, Ebenezer; Anitha, J

    2016-04-01

    Unsharp masking techniques are a prominent approach in contrast enhancement. Generalized masking formulation has static scale value selection, which limits the gain of contrast. In this paper, we propose an Optimum Wavelet Based Masking (OWBM) using Enhanced Cuckoo Search Algorithm (ECSA) for the contrast improvement of medical images. The ECSA can automatically adjust the ratio of nest rebuilding, using genetic operators such as adaptive crossover and mutation. First, the proposed contrast enhancement approach is validated quantitatively using Brain Web and MIAS database images. Later, the conventional nest rebuilding of cuckoo search optimization is modified using Adaptive Rebuilding of Worst Nests (ARWN). Experimental results are analyzed using various performance matrices, and our OWBM shows improved results as compared with other reported literature.

  2. A Web-Based Search Service to Support Imaging Spectrometer Instrument Operations

    NASA Technical Reports Server (NTRS)

    Smith, Alexander; Thompson, David R.; Sayfi, Elias; Xing, Zhangfan; Castano, Rebecca

    2013-01-01

    Imaging spectrometers yield rich and informative data products, but interpreting them demands time and expertise. There is a continual need for new algorithms and methods for rapid first-draft analyses to assist analysts during instrument opera-tions. Intelligent data analyses can summarize scenes to draft geologic maps, searching images to direct op-erator attention to key features. This validates data quality while facilitating rapid tactical decision making to select followup targets. Ideally these algorithms would operate in seconds, never grow bored, and be free from observation bias about the kinds of mineral-ogy that will be found.

  3. A secure image encryption method based on dynamic harmony search (DHS) combined with chaotic map

    NASA Astrophysics Data System (ADS)

    Mirzaei Talarposhti, Khadijeh; Khaki Jamei, Mehrzad

    2016-06-01

    In recent years, there has been increasing interest in the security of digital images. This study focuses on the gray scale image encryption using dynamic harmony search (DHS). In this research, first, a chaotic map is used to create cipher images, and then the maximum entropy and minimum correlation coefficient is obtained by applying a harmony search algorithm on them. This process is divided into two steps. In the first step, the diffusion of a plain image using DHS to maximize the entropy as a fitness function will be performed. However, in the second step, a horizontal and vertical permutation will be applied on the best cipher image, which is obtained in the previous step. Additionally, DHS has been used to minimize the correlation coefficient as a fitness function in the second step. The simulation results have shown that by using the proposed method, the maximum entropy and the minimum correlation coefficient, which are approximately 7.9998 and 0.0001, respectively, have been obtained.

  4. Halftone-image security improving using overall minimal-error searching.

    PubMed

    Guo, Jing-Ming; Liu, Yun-Fu

    2011-10-01

    For image-based data hiding, it is difficult to achieve good image quality when high embedding capacity and 100% data extraction are also demanded. In this study, the proposed method, namely, overall minimal-error searching (OMES) is developed to meet the aforementioned requirements. Moreover, the concept of secret sharing is also adopted to distribute watermarks into multiple halftone images, and the embedded information can only be extracted when all of the marked images are gathered. The OMES modifies the halftone values at the same position of all host images with the trained substitution table (S-Table). The S-Table makes the original combination of these halftone values as another meaningful combination for embedding watermark, which is the key part in determining the image quality. Thus, an optimization procedure is proposed to achieve the optimized S-Table. Two different encoders, called error-diffused-based and least-mean-square-based approaches are also developed to cooperate with the proposed OMES to cope with high processing speed and high image quality applications, respectively. Finally, for resisting the issues caused by the print-and-scan attack, such as zooming, rotation, and dot gain effect, a compensation correction procedure is also proposed. As demonstrated in the experimental results, the proposed approach provides good image quality, and is able to guard against some frequent happened attacks in printing applications.

  5. Structure-activity relationship in binding ligands to library of artificial receptors: the search for biocompatible sensor.

    PubMed

    Frączyk, Justyna; Mrozek, Agnieszka; Kamiński, Zbigniew J

    2010-11-01

    Structure-activity relationship (SAR) analysis was applied for studies of docking of colored ligands to library of artificial receptors formed by self-assembly of N-lipidated amino acids immobilised on the cellulose support. The studies show that the binding depends mainly on the structure of amino acid fragment but influence of N-lipidic fragment is less important.

  6. Quantitative digital image analysis of chromogenic assays for high throughput screening of alpha-amylase mutant libraries.

    PubMed

    Shankar, Manoharan; Priyadharshini, Ramachandran; Gunasekaran, Paramasamy

    2009-08-01

    An image analysis-based method for high throughput screening of an alpha-amylase mutant library using chromogenic assays was developed. Assays were performed in microplates and high resolution images of the assay plates were read using the Virtual Microplate Reader (VMR) script to quantify the concentration of the chromogen. This method is fast and sensitive in quantifying 0.025-0.3 mg starch/ml as well as 0.05-0.75 mg glucose/ml. It was also an effective screening method for improved alpha-amylase activity with a coefficient of variance of 18%.

  7. Strain Library Imaging Protocol for high-throughput, automated single-cell microscopy of large bacterial collections arrayed on multiwell plates.

    PubMed

    Shi, Handuo; Colavin, Alexandre; Lee, Timothy K; Huang, Kerwyn Casey

    2017-02-01

    Single-cell microscopy is a powerful tool for studying gene functions using strain libraries, but it suffers from throughput limitations. Here we describe the Strain Library Imaging Protocol (SLIP), which is a high-throughput, automated microscopy workflow for large strain collections that requires minimal user involvement. SLIP involves transferring arrayed bacterial cultures from multiwell plates onto large agar pads using inexpensive replicator pins and automatically imaging the resulting single cells. The acquired images are subsequently reviewed and analyzed by custom MATLAB scripts that segment single-cell contours and extract quantitative metrics. SLIP yields rich data sets on cell morphology and gene expression that illustrate the function of certain genes and the connections among strains in a library. For a library arrayed on 96-well plates, image acquisition can be completed within 4 min per plate.

  8. Visual-textual joint relevance learning for tag-based social image search.

    PubMed

    Gao, Yue; Wang, Meng; Zha, Zheng-Jun; Shen, Jialie; Li, Xuelong; Wu, Xindong

    2013-01-01

    Due to the popularity of social media websites, extensive research efforts have been dedicated to tag-based social image search. Both visual information and tags have been investigated in the research field. However, most existing methods use tags and visual characteristics either separately or sequentially in order to estimate the relevance of images. In this paper, we propose an approach that simultaneously utilizes both visual and textual information to estimate the relevance of user tagged images. The relevance estimation is determined with a hypergraph learning approach. In this method, a social image hypergraph is constructed, where vertices represent images and hyperedges represent visual or textual terms. Learning is achieved with use of a set of pseudo-positive images, where the weights of hyperedges are updated throughout the learning process. In this way, the impact of different tags and visual words can be automatically modulated. Comparative results of the experiments conducted on a dataset including 370+images are presented, which demonstrate the effectiveness of the proposed approach.

  9. Image copy-move forgery detection based on polar cosine transform and approximate nearest neighbor searching.

    PubMed

    Li, Yuenan

    2013-01-10

    Copy-move is one of the most commonly used image tampering operation, where a part of image content is copied and then pasted to another part of the same image. In order to make the forgery visually convincing and conceal its trace, the copied part may subject to post-processing operations such as rotation and blur. In this paper, we propose a polar cosine transform and approximate nearest neighbor searching based copy-move forgery detection algorithm. The algorithm starts by dividing the image into overlapping patches. Robust and compact features are extracted from patches by taking advantage of the rotationally-invariant and orthogonal properties of the polar cosine transform. Potential copy-move pairs are then detected by identifying the patches with similar features, which is formulated as approximate nearest neighbor searching and accomplished by means of locality-sensitive hashing (LSH). Finally, post-verifications are performed on potential pairs to filter out false matches and improve the accuracy of forgery detection. To sum up, the LSH based similar patch identification and the post-verification methods are two major novelties of the proposed work. Experimental results reveal that the proposed work can produce accurate detection results, and it exhibits high robustness to various post-processing operations. In addition, the LSH based similar patch detection scheme is much more effective than the widely used lexicographical sorting.

  10. Analyzing Medical Image Search Behavior: Semantics and Prediction of Query Results.

    PubMed

    De-Arteaga, Maria; Eggel, Ivan; Kahn, Charles E; Müller, Henning

    2015-10-01

    Log files of information retrieval systems that record user behavior have been used to improve the outcomes of retrieval systems, understand user behavior, and predict events. In this article, a log file of the ARRS GoldMiner search engine containing 222,005 consecutive queries is analyzed. Time stamps are available for each query, as well as masked IP addresses, which enables to identify queries from the same person. This article describes the ways in which physicians (or Internet searchers interested in medical images) search and proposes potential improvements by suggesting query modifications. For example, many queries contain only few terms and therefore are not specific; others contain spelling mistakes or non-medical terms that likely lead to poor or empty results. One of the goals of this report is to predict the number of results a query will have since such a model allows search engines to automatically propose query modifications in order to avoid result lists that are empty or too large. This prediction is made based on characteristics of the query terms themselves. Prediction of empty results has an accuracy above 88%, and thus can be used to automatically modify the query to avoid empty result sets for a user. The semantic analysis and data of reformulations done by users in the past can aid the development of better search systems, particularly to improve results for novice users. Therefore, this paper gives important ideas to better understand how people search and how to use this knowledge to improve the performance of specialized medical search engines.

  11. Uruguay: Le francais en quete d'image (Uruguay: French in Search of an Image).

    ERIC Educational Resources Information Center

    Francais dans le Monde, 1993

    1993-01-01

    The role of French language instruction in Uruguay is assessed. Drawing on results of recent surveys, it is observed that French suffers from a lackluster image, and from a lack of confidence among language teachers themselves. (MSE)

  12. Photo Library of the Nevada Site Office (Includes historical archive of nuclear testing images)

    DOE Data Explorer

    The Nevada Site Office makes available publicly released photos from their archive that includes photos from both current programs and historical activities. The historical collections include atmospheric and underground nuclear testing photos and photos of other events and people related to the Nevada Test Site. Current collections are focused on homeland security, stockpile stewardship, and environmental management and restoration. See also the Historical Film Library at http://www.nv.doe.gov/library/films/testfilms.aspx and the Current Film Library at http://www.nv.doe.gov/library/films/current.aspx. Current films can be viewed online, but only short clips of the historical films are viewable. They can be ordered via an online request form for a very small shipping and handling fee.

  13. Public Relations in Special Libraries.

    ERIC Educational Resources Information Center

    Rutkowski, Hollace Ann; And Others

    1991-01-01

    This theme issue includes 11 articles on public relations (PR) in special libraries. Highlights include PR at the Special Libraries Association (SLA); sources for marketing research for libraries; developing a library image; sample PR releases; brand strategies for libraries; case studies; publicizing a consortium; and a bibliography of pertinent…

  14. A Web-Based Library and Algorithm System for Satellite and Airborne Image Products

    DTIC Science & Technology

    2011-06-28

    Sequoia Scientific, Inc., and Dr. Paul Bissett at FERI, under other 6.1/6.2 program funding. 2 A Web-Based Library And Algorithm System For...of the spectrum matching approach to inverting hyperspectral imagery created by Drs. C. Mobley ( Sequoia Scientific) and P. Bissett (FERI...algorithms developed by Sequoia Scientific and FERI. Testing and Implementation of Library This project will result in the delivery of a WeoGeo

  15. Search for long-lived heavy charged particles using a ring imaging Cherenkov technique at LHCb.

    PubMed

    Aaij, R; Adeva, B; Adinolfi, M; Affolder, A; Ajaltouni, Z; Akar, S; Albrecht, J; Alessio, F; Alexander, M; Ali, S; Alkhazov, G; Alvarez Cartelle, P; Alves, A A; Amato, S; Amerio, S; Amhis, Y; An, L; Anderlini, L; Anderson, J; Andreotti, M; Andrews, J E; Appleby, R B; Aquines Gutierrez, O; Archilli, F; d'Argent, P; Artamonov, A; Artuso, M; Aslanides, E; Auriemma, G; Baalouch, M; Bachmann, S; Back, J J; Badalov, A; Baesso, C; Baldini, W; Barlow, R J; Barschel, C; Barsuk, S; Barter, W; Batozskaya, V; Battista, V; Bay, A; Beaucourt, L; Beddow, J; Bedeschi, F; Bediaga, I; Bel, L J; Belyaev, I; Ben-Haim, E; Bencivenni, G; Benson, S; Benton, J; Berezhnoy, A; Bernet, R; Bertolin, A; Bettler, M-O; van Beuzekom, M; Bien, A; Bifani, S; Bird, T; Birnkraut, A; Bizzeti, A; Blake, T; Blanc, F; Blouw, J; Blusk, S; Bocci, V; Bondar, A; Bondar, N; Bonivento, W; Borghi, S; Borgia, A; Borsato, M; Bowcock, T J V; Bowen, E; Bozzi, C; Brett, D; Britsch, M; Britton, T; Brodzicka, J; Brook, N H; Bursche, A; Buytaert, J; Cadeddu, S; Calabrese, R; Calvi, M; Calvo Gomez, M; Campana, P; Campora Perez, D; Capriotti, L; Carbone, A; Carboni, G; Cardinale, R; Cardini, A; Carniti, P; Carson, L; Carvalho Akiba, K; Casanova Mohr, R; Casse, G; Cassina, L; Castillo Garcia, L; Cattaneo, M; Cauet, Ch; Cavallero, G; Cenci, R; Charles, M; Charpentier, Ph; Chefdeville, M; Chen, S; Cheung, S F; Chiapolini, N; Chrzaszcz, M; Cid Vidal, X; Ciezarek, G; Clarke, P E L; Clemencic, M; Cliff, H V; Closier, J; Coco, V; Cogan, J; Cogneras, E; Cogoni, V; Cojocariu, L; Collazuol, G; Collins, P; Comerma-Montells, A; Contu, A; Cook, A; Coombes, M; Coquereau, S; Corti, G; Corvo, M; Counts, I; Couturier, B; Cowan, G A; Craik, D C; Crocombe, A; Cruz Torres, M; Cunliffe, S; Currie, R; D'Ambrosio, C; Dalseno, J; David, P N Y; Davis, A; De Bruyn, K; De Capua, S; De Cian, M; De Miranda, J M; De Paula, L; De Silva, W; De Simone, P; Dean, C T; Decamp, D; Deckenhoff, M; Del Buono, L; Déléage, N; Derkach, D; Deschamps, O; Dettori, F; Dey, B; Di Canto, A; Di Ruscio, F; Dijkstra, H; Donleavy, S; Dordei, F; Dorigo, M; Dosil Suárez, A; Dossett, D; Dovbnya, A; Dreimanis, K; Dujany, G; Dupertuis, F; Durante, P; Dzhelyadin, R; Dziurda, A; Dzyuba, A; Easo, S; Egede, U; Egorychev, V; Eidelman, S; Eisenhardt, S; Eitschberger, U; Ekelhof, R; Eklund, L; El Rifai, I; Elsasser, Ch; Ely, S; Esen, S; Evans, H M; Evans, T; Falabella, A; Färber, C; Farinelli, C; Farley, N; Farry, S; Fay, R; Ferguson, D; Fernandez Albor, V; Ferrari, F; Ferreira Rodrigues, F; Ferro-Luzzi, M; Filippov, S; Fiore, M; Fiorini, M; Firlej, M; Fitzpatrick, C; Fiutowski, T; Fol, P; Fontana, M; Fontanelli, F; Forty, R; Francisco, O; Frank, M; Frei, C; Frosini, M; Fu, J; Furfaro, E; Gallas Torreira, A; Galli, D; Gallorini, S; Gambetta, S; Gandelman, M; Gandini, P; Gao, Y; García Pardiñas, J; Garofoli, J; Garra Tico, J; Garrido, L; Gascon, D; Gaspar, C; Gauld, R; Gavardi, L; Gazzoni, G; Geraci, A; Gerick, D; Gersabeck, E; Gersabeck, M; Gershon, T; Ghez, Ph; Gianelle, A; Gianì, S; Gibson, V; Giubega, L; Gligorov, V V; Göbel, C; Golubkov, D; Golutvin, A; Gomes, A; Gotti, C; Grabalosa Gándara, M; Graciani Diaz, R; Granado Cardoso, L A; Graugés, E; Graverini, E; Graziani, G; Grecu, A; Greening, E; Gregson, S; Griffith, P; Grillo, L; Grünberg, O; Gui, B; Gushchin, E; Guz, Yu; Gys, T; Hadjivasiliou, C; Haefeli, G; Haen, C; Haines, S C; Hall, S; Hamilton, B; Hampson, T; Han, X; Hansmann-Menzemer, S; Harnew, N; Harnew, S T; Harrison, J; He, J; Head, T; Heijne, V; Hennessy, K; Henrard, P; Henry, L; Hernando Morata, J A; van Herwijnen, E; Heß, M; Hicheur, A; Hill, D; Hoballah, M; Hombach, C; Hulsbergen, W; Humair, T; Hussain, N; Hutchcroft, D; Hynds, D; Idzik, M; Ilten, P; Jacobsson, R; Jaeger, A; Jalocha, J; Jans, E; Jawahery, A; Jing, F; John, M; Johnson, D; Jones, C R; Joram, C; Jost, B; Jurik, N; Kandybei, S; Kanso, W; Karacson, M; Karbach, T M; Karodia, S; Kelsey, M; Kenyon, I R; Kenzie, M; Ketel, T; Khanji, B; Khurewathanakul, C; Klaver, S; Klimaszewski, K; Kochebina, O; Kolpin, M; Komarov, I; Koopman, R F; Koppenburg, P; Kravchuk, L; Kreplin, K; Kreps, M; Krocker, G; Krokovny, P; Kruse, F; Kucewicz, W; Kucharczyk, M; Kudryavtsev, V; Kurek, K; Kvaratskheliya, T; La Thi, V N; Lacarrere, D; Lafferty, G; Lai, A; Lambert, D; Lambert, R W; Lanfranchi, G; Langenbruch, C; Langhans, B; Latham, T; Lazzeroni, C; Le Gac, R; van Leerdam, J; Lees, J P; Lefèvre, R; Leflat, A; Lefrançois, J; Leroy, O; Lesiak, T; Leverington, B; Li, Y; Likhomanenko, T; Liles, M; Lindner, R; Linn, C; Lionetto, F; Liu, B; Lohn, S; Longstaff, I; Lopes, J H; Lucchesi, D; Luo, H; Lupato, A; Luppi, E; Lupton, O; Machefert, F; Machikhiliyan, I V; Maciuc, F; Maev, O; Malde, S; Malinin, A; Manca, G; Mancinelli, G; Manning, P; Mapelli, A; Maratas, J; Marchand, J F; Marconi, U; Marin Benito, C; Marino, P; Märki, R; Marks, J; Martellotti, G; Martinelli, M; Martinez Santos, D; Martinez Vidal, F; Martins Tostes, D; Massafferri, A; Matev, R; Mathe, Z; Matteuzzi, C; Mauri, A; Maurin, B; Mazurov, A; McCann, M; McCarthy, J; McNab, A; McNulty, R; McSkelly, B; Meadows, B; Meier, F; Meissner, M; Merk, M; Milanes, D A; Minard, M N; Mitzel, D S; Molina Rodriguez, J; Monteil, S; Morandin, M; Morawski, P; Mordà, A; Morello, M J; Moron, J; Morris, A B; Mountain, R; Muheim, F; Müller, J; Müller, K; Müller, V; Mussini, M; Muster, B; Naik, P; Nakada, T; Nandakumar, R; Nasteva, I; Needham, M; Neri, N; Neubert, S; Neufeld, N; Neuner, M; Nguyen, A D; Nguyen, T D; Nguyen-Mau, C; Niess, V; Niet, R; Nikitin, N; Nikodem, T; Novoselov, A; O'Hanlon, D P; Oblakowska-Mucha, A; Obraztsov, V; Ogilvy, S; Okhrimenko, O; Oldeman, R; Onderwater, C J G; Osorio Rodrigues, B; Otalora Goicochea, J M; Otto, A; Owen, P; Oyanguren, A; Palano, A; Palombo, F; Palutan, M; Panman, J; Papanestis, A; Pappagallo, M; Pappalardo, L L; Parkes, C; Passaleva, G; Patel, G D; Patel, M; Patrignani, C; Pearce, A; Pellegrino, A; Penso, G; Pepe Altarelli, M; Perazzini, S; Perret, P; Pescatore, L; Petridis, K; Petrolini, A; Picatoste Olloqui, E; Pietrzyk, B; Pilař, T; Pinci, D; Pistone, A; Playfer, S; Plo Casasus, M; Poikela, T; Polci, F; Poluektov, A; Polyakov, I; Polycarpo, E; Popov, A; Popov, D; Popovici, B; Potterat, C; Price, E; Price, J D; Prisciandaro, J; Pritchard, A; Prouve, C; Pugatch, V; Puig Navarro, A; Punzi, G; Qian, W; Quagliani, R; Rachwal, B; Rademacker, J H; Rakotomiaramanana, B; Rama, M; Rangel, M S; Raniuk, I; Rauschmayr, N; Raven, G; Redi, F; Reichert, S; Reid, M M; Dos Reis, A C; Ricciardi, S; Richards, S; Rihl, M; Rinnert, K; Rives Molina, V; Robbe, P; Rodrigues, A B; Rodrigues, E; Rodriguez Perez, P; Roiser, S; Romanovsky, V; Romero Vidal, A; Rotondo, M; Rouvinet, J; Ruf, T; Ruiz, H; Ruiz Valls, P; Saborido Silva, J J; Sagidova, N; Sail, P; Saitta, B; Salustino Guimaraes, V; Sanchez Mayordomo, C; Sanmartin Sedes, B; Santacesaria, R; Santamarina Rios, C; Santovetti, E; Sarti, A; Satriano, C; Satta, A; Saunders, D M; Savrina, D; Schiller, M; Schindler, H; Schlupp, M; Schmelling, M; Schmelzer, T; Schmidt, B; Schneider, O; Schopper, A; Schune, M H; Schwemmer, R; Sciascia, B; Sciubba, A; Semennikov, A; Sepp, I; Serra, N; Serrano, J; Sestini, L; Seyfert, P; Shapkin, M; Shapoval, I; Shcheglov, Y; Shears, T; Shekhtman, L; Shevchenko, V; Shires, A; Silva Coutinho, R; Simi, G; Sirendi, M; Skidmore, N; Skillicorn, I; Skwarnicki, T; Smith, E; Smith, E; Smith, J; Smith, M; Snoek, H; Sokoloff, M D; Soler, F J P; Soomro, F; Souza, D; Souza De Paula, B; Spaan, B; Spradlin, P; Sridharan, S; Stagni, F; Stahl, M; Stahl, S; Steinkamp, O; Stenyakin, O; Sterpka, F; Stevenson, S; Stoica, S; Stone, S; Storaci, B; Stracka, S; Straticiuc, M; Straumann, U; Stroili, R; Sun, L; Sutcliffe, W; Swientek, K; Swientek, S; Syropoulos, V; Szczekowski, M; Szczypka, P; Szumlak, T; T'Jampens, S; Tekampe, T; Teklishyn, M; Tellarini, G; Teubert, F; Thomas, C; Thomas, E; van Tilburg, J; Tisserand, V; Tobin, M; Todd, J; Tolk, S; Tomassetti, L; Tonelli, D; Topp-Joergensen, S; Torr, N; Tournefier, E; Tourneur, S; Trabelsi, K; Tran, M T; Tresch, M; Trisovic, A; Tsaregorodtsev, A; Tsopelas, P; Tuning, N; Ubeda Garcia, M; Ukleja, A; Ustyuzhanin, A; Uwer, U; Vacca, C; Vagnoni, V; Valenti, G; Vallier, A; Vazquez Gomez, R; Vazquez Regueiro, P; Vázquez Sierra, C; Vecchi, S; Velthuis, J J; Veltri, M; Veneziano, G; Vesterinen, M; Viaud, B; Vieira, D; Vieites Diaz, M; Vilasis-Cardona, X; Vollhardt, A; Volyanskyy, D; Voong, D; Vorobyev, A; Vorobyev, V; Voß, C; de Vries, J A; Waldi, R; Wallace, C; Wallace, R; Walsh, J; Wandernoth, S; Wang, J; Ward, D R; Watson, N K; Websdale, D; Weiden, A; Whitehead, M; Wiedner, D; Wilkinson, G; Wilkinson, M; Williams, M; Williams, M P; Williams, M; Wilson, F F; Wimberley, J; Wishahi, J; Wislicki, W; Witek, M; Wormser, G; Wotton, S A; Wright, S; Wyllie, K; Xie, Y; Xu, Z; Yang, Z; Yuan, X; Yushchenko, O; Zangoli, M; Zavertyaev, M; Zhang, L; Zhang, Y; Zhelezov, A; Zhokhov, A; Zhong, L

    A search is performed for heavy long-lived charged particles using 3.0 [Formula: see text] of proton-proton collisions collected at [Formula: see text][Formula: see text] 7 and 8  TeV with the LHCb detector. The search is mainly based on the response of the ring imaging Cherenkov detectors to distinguish the heavy, slow-moving particles from muons. No evidence is found for the production of such long-lived states. The results are expressed as limits on the Drell-Yan production of pairs of long-lived particles, with both particles in the LHCb pseudorapidity acceptance, [Formula: see text]. The mass-dependent cross-section upper limits are in the range 2-4 fb (at 95 % CL) for masses between 14 and 309 [Formula: see text].

  16. Search for long-lived heavy charged particles using a ring imaging Cherenkov technique at LHCb

    NASA Astrophysics Data System (ADS)

    Aaij, R.; Adeva, B.; Adinolfi, M.; Affolder, A.; Ajaltouni, Z.; Akar, S.; Albrecht, J.; Alessio, F.; Alexander, M.; Ali, S.; Alkhazov, G.; Alvarez Cartelle, P.; Alves, A. A., Jr.; Amato, S.; Amerio, S.; Amhis, Y.; An, L.; Anderlini, L.; Anderson, J.; Andreotti, M.; Andrews, J. E.; Appleby, R. B.; Aquines Gutierrez, O.; Archilli, F.; d'Argent, P.; Artamonov, A.; Artuso, M.; Aslanides, E.; Auriemma, G.; Baalouch, M.; Bachmann, S.; Back, J. J.; Badalov, A.; Baesso, C.; Baldini, W.; Barlow, R. J.; Barschel, C.; Barsuk, S.; Barter, W.; Batozskaya, V.; Battista, V.; Bay, A.; Beaucourt, L.; Beddow, J.; Bedeschi, F.; Bediaga, I.; Bel, L. J.; Belyaev, I.; Ben-Haim, E.; Bencivenni, G.; Benson, S.; Benton, J.; Berezhnoy, A.; Bernet, R.; Bertolin, A.; Bettler, M.-O.; van Beuzekom, M.; Bien, A.; Bifani, S.; Bird, T.; Birnkraut, A.; Bizzeti, A.; Blake, T.; Blanc, F.; Blouw, J.; Blusk, S.; Bocci, V.; Bondar, A.; Bondar, N.; Bonivento, W.; Borghi, S.; Borgia, A.; Borsato, M.; Bowcock, T. J. V.; Bowen, E.; Bozzi, C.; Brett, D.; Britsch, M.; Britton, T.; Brodzicka, J.; Brook, N. H.; Bursche, A.; Buytaert, J.; Cadeddu, S.; Calabrese, R.; Calvi, M.; Calvo Gomez, M.; Campana, P.; Campora Perez, D.; Capriotti, L.; Carbone, A.; Carboni, G.; Cardinale, R.; Cardini, A.; Carniti, P.; Carson, L.; Carvalho Akiba, K.; Casanova Mohr, R.; Casse, G.; Cassina, L.; Castillo Garcia, L.; Cattaneo, M.; Cauet, Ch.; Cavallero, G.; Cenci, R.; Charles, M.; Charpentier, Ph.; Chefdeville, M.; Chen, S.; Cheung, S. F.; Chiapolini, N.; Chrzaszcz, M.; Cid Vidal, X.; Ciezarek, G.; Clarke, P. E. L.; Clemencic, M.; Cliff, H. V.; Closier, J.; Coco, V.; Cogan, J.; Cogneras, E.; Cogoni, V.; Cojocariu, L.; Collazuol, G.; Collins, P.; Comerma-Montells, A.; Contu, A.; Cook, A.; Coombes, M.; Coquereau, S.; Corti, G.; Corvo, M.; Counts, I.; Couturier, B.; Cowan, G. A.; Craik, D. C.; Crocombe, A.; Cruz Torres, M.; Cunliffe, S.; Currie, R.; D'Ambrosio, C.; Dalseno, J.; David, P. N. Y.; Davis, A.; De Bruyn, K.; De Capua, S.; De Cian, M.; De Miranda, J. M.; De Paula, L.; De Silva, W.; De Simone, P.; Dean, C. T.; Decamp, D.; Deckenhoff, M.; Del Buono, L.; Déléage, N.; Derkach, D.; Deschamps, O.; Dettori, F.; Dey, B.; Di Canto, A.; Di Ruscio, F.; Dijkstra, H.; Donleavy, S.; Dordei, F.; Dorigo, M.; Dosil Suárez, A.; Dossett, D.; Dovbnya, A.; Dreimanis, K.; Dujany, G.; Dupertuis, F.; Durante, P.; Dzhelyadin, R.; Dziurda, A.; Dzyuba, A.; Easo, S.; Egede, U.; Egorychev, V.; Eidelman, S.; Eisenhardt, S.; Eitschberger, U.; Ekelhof, R.; Eklund, L.; El Rifai, I.; Elsasser, Ch.; Ely, S.; Esen, S.; Evans, H. M.; Evans, T.; Falabella, A.; Färber, C.; Farinelli, C.; Farley, N.; Farry, S.; Fay, R.; Ferguson, D.; Fernandez Albor, V.; Ferrari, F.; Ferreira Rodrigues, F.; Ferro-Luzzi, M.; Filippov, S.; Fiore, M.; Fiorini, M.; Firlej, M.; Fitzpatrick, C.; Fiutowski, T.; Fol, P.; Fontana, M.; Fontanelli, F.; Forty, R.; Francisco, O.; Frank, M.; Frei, C.; Frosini, M.; Fu, J.; Furfaro, E.; Gallas Torreira, A.; Galli, D.; Gallorini, S.; Gambetta, S.; Gandelman, M.; Gandini, P.; Gao, Y.; García Pardiñas, J.; Garofoli, J.; Garra Tico, J.; Garrido, L.; Gascon, D.; Gaspar, C.; Gauld, R.; Gavardi, L.; Gazzoni, G.; Geraci, A.; Gerick, D.; Gersabeck, E.; Gersabeck, M.; Gershon, T.; Ghez, Ph.; Gianelle, A.; Gianì, S.; Gibson, V.; Giubega, L.; Gligorov, V. V.; Göbel, C.; Golubkov, D.; Golutvin, A.; Gomes, A.; Gotti, C.; Grabalosa Gándara, M.; Graciani Diaz, R.; Granado Cardoso, L. A.; Graugés, E.; Graverini, E.; Graziani, G.; Grecu, A.; Greening, E.; Gregson, S.; Griffith, P.; Grillo, L.; Grünberg, O.; Gui, B.; Gushchin, E.; Guz, Yu.; Gys, T.; Hadjivasiliou, C.; Haefeli, G.; Haen, C.; Haines, S. C.; Hall, S.; Hamilton, B.; Hampson, T.; Han, X.; Hansmann-Menzemer, S.; Harnew, N.; Harnew, S. T.; Harrison, J.; He, J.; Head, T.; Heijne, V.; Hennessy, K.; Henrard, P.; Henry, L.; Hernando Morata, J. A.; van Herwijnen, E.; Heß, M.; Hicheur, A.; Hill, D.; Hoballah, M.; Hombach, C.; Hulsbergen, W.; Humair, T.; Hussain, N.; Hutchcroft, D.; Hynds, D.; Idzik, M.; Ilten, P.; Jacobsson, R.; Jaeger, A.; Jalocha, J.; Jans, E.; Jawahery, A.; Jing, F.; John, M.; Johnson, D.; Jones, C. R.; Joram, C.; Jost, B.; Jurik, N.; Kandybei, S.; Kanso, W.; Karacson, M.; Karbach, T. M.; Karodia, S.; Kelsey, M.; Kenyon, I. R.; Kenzie, M.; Ketel, T.; Khanji, B.; Khurewathanakul, C.; Klaver, S.; Klimaszewski, K.; Kochebina, O.; Kolpin, M.; Komarov, I.; Koopman, R. F.; Koppenburg, P.; Kravchuk, L.; Kreplin, K.; Kreps, M.; Krocker, G.; Krokovny, P.; Kruse, F.; Kucewicz, W.; Kucharczyk, M.; Kudryavtsev, V.; Kurek, K.; Kvaratskheliya, T.; La Thi, V. N.; Lacarrere, D.; Lafferty, G.; Lai, A.; Lambert, D.; Lambert, R. W.; Lanfranchi, G.; Langenbruch, C.; Langhans, B.; Latham, T.; Lazzeroni, C.; Le Gac, R.; van Leerdam, J.; Lees, J. P.; Lefèvre, R.; Leflat, A.; Lefrançois, J.; Leroy, O.; Lesiak, T.; Leverington, B.; Li, Y.; Likhomanenko, T.; Liles, M.; Lindner, R.; Linn, C.; Lionetto, F.; Liu, B.; Lohn, S.; Longstaff, I.; Lopes, J. H.; Lucchesi, D.; Luo, H.; Lupato, A.; Luppi, E.; Lupton, O.; Machefert, F.; Machikhiliyan, I. V.; Maciuc, F.; Maev, O.; Malde, S.; Malinin, A.; Manca, G.; Mancinelli, G.; Manning, P.; Mapelli, A.; Maratas, J.; Marchand, J. F.; Marconi, U.; Marin Benito, C.; Marino, P.; Märki, R.; Marks, J.; Martellotti, G.; Martinelli, M.; Martinez Santos, D.; Martinez Vidal, F.; Martins Tostes, D.; Massafferri, A.; Matev, R.; Mathe, Z.; Matteuzzi, C.; Mauri, A.; Maurin, B.; Mazurov, A.; McCann, M.; McCarthy, J.; McNab, A.; McNulty, R.; McSkelly, B.; Meadows, B.; Meier, F.; Meissner, M.; Merk, M.; Milanes, D. A.; Minard, M. N.; Mitzel, D. S.; Molina Rodriguez, J.; Monteil, S.; Morandin, M.; Morawski, P.; Mordà, A.; Morello, M. J.; Moron, J.; Morris, A. B.; Mountain, R.; Muheim, F.; Müller, J.; Müller, K.; Müller, V.; Mussini, M.; Muster, B.; Naik, P.; Nakada, T.; Nandakumar, R.; Nasteva, I.; Needham, M.; Neri, N.; Neubert, S.; Neufeld, N.; Neuner, M.; Nguyen, A. D.; Nguyen, T. D.; Nguyen-Mau, C.; Niess, V.; Niet, R.; Nikitin, N.; Nikodem, T.; Novoselov, A.; O'Hanlon, D. P.; Oblakowska-Mucha, A.; Obraztsov, V.; Ogilvy, S.; Okhrimenko, O.; Oldeman, R.; Onderwater, C. J. G.; Osorio Rodrigues, B.; Otalora Goicochea, J. M.; Otto, A.; Owen, P.; Oyanguren, A.; Palano, A.; Palombo, F.; Palutan, M.; Panman, J.; Papanestis, A.; Pappagallo, M.; Pappalardo, L. L.; Parkes, C.; Passaleva, G.; Patel, G. D.; Patel, M.; Patrignani, C.; Pearce, A.; Pellegrino, A.; Penso, G.; Pepe Altarelli, M.; Perazzini, S.; Perret, P.; Pescatore, L.; Petridis, K.; Petrolini, A.; Picatoste Olloqui, E.; Pietrzyk, B.; Pilař, T.; Pinci, D.; Pistone, A.; Playfer, S.; Plo Casasus, M.; Poikela, T.; Polci, F.; Poluektov, A.; Polyakov, I.; Polycarpo, E.; Popov, A.; Popov, D.; Popovici, B.; Potterat, C.; Price, E.; Price, J. D.; Prisciandaro, J.; Pritchard, A.; Prouve, C.; Pugatch, V.; Puig Navarro, A.; Punzi, G.; Qian, W.; Quagliani, R.; Rachwal, B.; Rademacker, J. H.; Rakotomiaramanana, B.; Rama, M.; Rangel, M. S.; Raniuk, I.; Rauschmayr, N.; Raven, G.; Redi, F.; Reichert, S.; Reid, M. M.; dos Reis, A. C.; Ricciardi, S.; Richards, S.; Rihl, M.; Rinnert, K.; Rives Molina, V.; Robbe, P.; Rodrigues, A. B.; Rodrigues, E.; Rodriguez Perez, P.; Roiser, S.; Romanovsky, V.; Romero Vidal, A.; Rotondo, M.; Rouvinet, J.; Ruf, T.; Ruiz, H.; Ruiz Valls, P.; Saborido Silva, J. J.; Sagidova, N.; Sail, P.; Saitta, B.; Salustino Guimaraes, V.; Sanchez Mayordomo, C.; Sanmartin Sedes, B.; Santacesaria, R.; Santamarina Rios, C.; Santovetti, E.; Sarti, A.; Satriano, C.; Satta, A.; Saunders, D. M.; Savrina, D.; Schiller, M.; Schindler, H.; Schlupp, M.; Schmelling, M.; Schmelzer, T.; Schmidt, B.; Schneider, O.; Schopper, A.; Schune, M. H.; Schwemmer, R.; Sciascia, B.; Sciubba, A.; Semennikov, A.; Sepp, I.; Serra, N.; Serrano, J.; Sestini, L.; Seyfert, P.; Shapkin, M.; Shapoval, I.; Shcheglov, Y.; Shears, T.; Shekhtman, L.; Shevchenko, V.; Shires, A.; Silva Coutinho, R.; Simi, G.; Sirendi, M.; Skidmore, N.; Skillicorn, I.; Skwarnicki, T.; Smith, E.; Smith, E.; Smith, J.; Smith, M.; Snoek, H.; Sokoloff, M. D.; Soler, F. J. P.; Soomro, F.; Souza, D.; Souza De Paula, B.; Spaan, B.; Spradlin, P.; Sridharan, S.; Stagni, F.; Stahl, M.; Stahl, S.; Steinkamp, O.; Stenyakin, O.; Sterpka, F.; Stevenson, S.; Stoica, S.; Stone, S.; Storaci, B.; Stracka, S.; Straticiuc, M.; Straumann, U.; Stroili, R.; Sun, L.; Sutcliffe, W.; Swientek, K.; Swientek, S.; Syropoulos, V.; Szczekowski, M.; Szczypka, P.; Szumlak, T.; T'Jampens, S.; Tekampe, T.; Teklishyn, M.; Tellarini, G.; Teubert, F.; Thomas, C.; Thomas, E.; van Tilburg, J.; Tisserand, V.; Tobin, M.; Todd, J.; Tolk, S.; Tomassetti, L.; Tonelli, D.; Topp-Joergensen, S.; Torr, N.; Tournefier, E.; Tourneur, S.; Trabelsi, K.; Tran, M. T.; Tresch, M.; Trisovic, A.; Tsaregorodtsev, A.; Tsopelas, P.; Tuning, N.; Ubeda Garcia, M.; Ukleja, A.; Ustyuzhanin, A.; Uwer, U.; Vacca, C.; Vagnoni, V.; Valenti, G.; Vallier, A.; Vazquez Gomez, R.; Vazquez Regueiro, P.; Vázquez Sierra, C.; Vecchi, S.; Velthuis, J. J.; Veltri, M.; Veneziano, G.; Vesterinen, M.; Viaud, B.; Vieira, D.; Vieites Diaz, M.; Vilasis-Cardona, X.; Vollhardt, A.; Volyanskyy, D.; Voong, D.; Vorobyev, A.; Vorobyev, V.; Voß, C.; de Vries, J. A.; Waldi, R.; Wallace, C.; Wallace, R.; Walsh, J.; Wandernoth, S.; Wang, J.; Ward, D. R.; Watson, N. K.; Websdale, D.; Weiden, A.; Whitehead, M.; Wiedner, D.; Wilkinson, G.; Wilkinson, M.; Williams, M.; Williams, M. P.; Williams, M.; Wilson, F. F.; Wimberley, J.; Wishahi, J.; Wislicki, W.; Witek, M.; Wormser, G.; Wotton, S. A.; Wright, S.; Wyllie, K.; Xie, Y.; Xu, Z.; Yang, Z.; Yuan, X.; Yushchenko, O.; Zangoli, M.; Zavertyaev, M.; Zhang, L.; Zhang, Y.; Zhelezov, A.; Zhokhov, A.; Zhong, L.

    2015-12-01

    A search is performed for heavy long-lived charged particles using 3.0 fb^{-1} of proton-proton collisions collected at √{s} = 7 and 8 TeV with the LHCb detector. The search is mainly based on the response of the ring imaging Cherenkov detectors to distinguish the heavy, slow-moving particles from muons. No evidence is found for the production of such long-lived states. The results are expressed as limits on the Drell-Yan production of pairs of long-lived particles, with both particles in the LHCb pseudorapidity acceptance, 1.8 < η < 4.9. The mass-dependent cross-section upper limits are in the range 2-4 fb (at 95 % CL) for masses between 14 and 309 { GeV/c^2}.

  17. An adaptive knowledge-driven medical image search engine for interactive diffuse parenchymal lung disease quantification

    NASA Astrophysics Data System (ADS)

    Tao, Yimo; Zhou, Xiang Sean; Bi, Jinbo; Jerebkoa, Anna; Wolf, Matthias; Salganicoff, Marcos; Krishnana, Arun

    2009-02-01

    Characterization and quantification of the severity of diffuse parenchymal lung diseases (DPLDs) using Computed Tomography (CT) is an important issue in clinical research. Recently, several classification-based computer-aided diagnosis (CAD) systems [1-3] for DPLD have been proposed. For some of those systems, a degradation of performance [2] was reported on unseen data because of considerable inter-patient variances of parenchymal tissue patterns. We believe that a CAD system of real clinical value should be robust to inter-patient variances and be able to classify unseen cases online more effectively. In this work, we have developed a novel adaptive knowledge-driven CT image search engine that combines offline learning aspects of classification-based CAD systems with online learning aspects of content-based image retrieval (CBIR) systems. Our system can seamlessly and adaptively fuse offline accumulated knowledge with online feedback, leading to an improved online performance in detecting DPLD in both accuracy and speed aspects. Our contribution lies in: (1) newly developed 3D texture-based and morphology-based features; (2) a multi-class offline feature selection method; and, (3) a novel image search engine framework for detecting DPLD. Very promising results have been obtained on a small test set.

  18. Optimal processing for gel electrophoresis images: Applying Monte Carlo Tree Search in GelApp.

    PubMed

    Nguyen, Phi-Vu; Ghezal, Ali; Hsueh, Ya-Chih; Boudier, Thomas; Gan, Samuel Ken-En; Lee, Hwee Kuan

    2016-08-01

    In biomedical research, gel band size estimation in electrophoresis analysis is a routine process. To facilitate and automate this process, numerous software have been released, notably the GelApp mobile app. However, the band detection accuracy is limited due to a band detection algorithm that cannot adapt to the variations in input images. To address this, we used the Monte Carlo Tree Search with Upper Confidence Bound (MCTS-UCB) method to efficiently search for optimal image processing pipelines for the band detection task, thereby improving the segmentation algorithm. Incorporating this into GelApp, we report a significant enhancement of gel band detection accuracy by 55.9 ± 2.0% for protein polyacrylamide gels, and 35.9 ± 2.5% for DNA SYBR green agarose gels. This implementation is a proof-of-concept in demonstrating MCTS-UCB as a strategy to optimize general image segmentation. The improved version of GelApp-GelApp 2.0-is freely available on both Google Play Store (for Android platform), and Apple App Store (for iOS platform).

  19. ‘Function-first’ Lead Discovery: Mode of Action Profiling of Natural Product Libraries Using Image-Based Screening

    PubMed Central

    Schulze, Christopher J.; Bray, Walter M.; Woerhmann, Marcos H.; Stuart, Joshua; Lokey, R. Scott; Linington, Roger G.

    2013-01-01

    Summary Cytological profiling is a high-content image-based screening technology that provides insight into the mode of action (MOA) for test compounds by directly measuring hundreds of phenotypic cellular features. We have extended this recently reported technology to the mechanistic characterization of unknown natural products libraries for the direct prediction of compound MOAs at the primary screening stage. By analyzing a training set of commercial compounds of known mechanism and comparing these profiles to those obtained from natural product library members, we have successfully annotated extracts based on mode of action, dereplicated known compounds based on biological similarity to the training set, and identified and predicted the MOA of a family of new iron siderophores. Coupled with traditional analytical techniques, cytological profiling provides a new avenue for the creation of ‘function-first’ platforms for natural products discovery. PMID:23438757

  20. Phage display biopanning and isolation of target-unrelated peptides: in search of nonspecific binders hidden in a combinatorial library.

    PubMed

    Bakhshinejad, Babak; Zade, Hesam Motaleb; Shekarabi, Hosna Sadat Zahed; Neman, Sara

    2016-12-01

    Phage display is known as a powerful methodology for the identification of targeting ligands that specifically bind to a variety of targets. The high-throughput screening of phage display combinatorial peptide libraries is performed through the affinity selection method of biopanning. Although phage display selection has proven very successful in the discovery of numerous high-affinity target-binding peptides with potential application in drug discovery and delivery, the enrichment of false-positive target-unrelated peptides (TUPs) without any actual affinity towards the target remains a major problem of library screening. Selection-related TUPs may emerge because of binding to the components of the screening system rather than the target. Propagation-related TUPs may arise as a result of faster growth rate of some phage clones enabling them to outcompete slow-propagating clones. Amplification of the library between rounds of biopanning makes a significant contribution to the selection of phage clones with propagation advantage. Distinguishing nonspecific TUPs from true target binders is of particular importance for the translation of biopanning findings from basic research to clinical applications. Different experimental and in silico approaches are applied to assess the specificity of phage display-derived peptides towards the target. Bioinformatic tools are playing a rapidly growing role in the analysis of biopanning data and identification of target-irrelevant TUPs. Recent progress in the introduction of efficient strategies for TUP detection holds enormous promise for the discovery of clinically relevant cell- and tissue-homing peptides and paves the way for the development of novel targeted diagnostic and therapeutic platforms in pharmaceutical areas.

  1. MapReduce Implementation of a Hybrid Spectral Library-Database Search Method for Large-Scale Peptide Identification

    SciTech Connect

    Kalyanaraman, Anantharaman; Cannon, William R.; Latt, Benjamin K.; Baxter, Douglas J.

    2011-11-01

    A MapReduce-based implementation called MR- MSPolygraph for parallelizing peptide identification from mass spectrometry data is presented. The underlying serial method, MSPolygraph, uses a novel hybrid approach to match an experimental spectrum against a combination of a protein sequence database and a spectral library. Our MapReduce implementation can run on any Hadoop cluster environment. Experimental results demonstrate that, relative to the serial version, MR-MSPolygraph reduces the time to solution from weeks to hours, for processing tens of thousands of experimental spectra. Speedup and other related performance studies are also reported on a 400-core Hadoop cluster using spectral datasets from environmental microbial communities as inputs.

  2. Searching for Water Ice at the Lunar North Pole Using High-Resolution Images and Radar

    NASA Technical Reports Server (NTRS)

    Mitchell, J. L.; Lawrence, S. J.; Robinson, M. S.; Speyerer, E. J.; Denevi, B. W.

    2017-01-01

    Permanently shadowed regions (PSRs) at the lunar poles are potential reservoirs of frozen volatiles, and are therefore high-priority exploration targets. PSRs trap water and other volatiles because their annual maximum temperatures (40-100K) are lower than the sublimation temperatures of these species (i.e. H2O approx.104K). Previous studies using various remote sensing techniques have not been able to definitively characterize the distribution or abundance of ice in lunar PSRs. The purpose of this study is to search for signs of ice in PSRs using two complimentary remote sensing techniques: radar and visible images.

  3. Search Middleware and the Simple Digital Library Interoperability Protocol [and] Meeting the Challenge of Film Research In the Electronic Age [and] Collection-based Persistent Digital Archives-Part 1 [and] The Virtual Union Catalog: A Comparative Study.

    ERIC Educational Resources Information Center

    Paepcke, Andreas; Brandriff, Robert; Janee, Greg; Larson, Ray; Ludaescher, Bertram; Melnik, Sergey; Raghavan, Sriram; [and] Owen, Catherine; Pearson, Tony; Arnold, Stephen; [and] Moore, Reagan; Baru, Chaitan; Rajasekar, Arcot; Ludaescher, Bertram; Marciano, Richard; Wan, Michael; Schroeder, Wayne; Gupta, Amarnath; [and] Coyle, Karen

    2000-01-01

    Includes four articles that discuss: (1) search middleware, or software packages that allow access to information sources for digital libraries; (2) film archives and building online collections of data for use in film research and teaching; (3) digital archives; and (4) a virtual union catalog for the University of California. (LRW)

  4. The Shape Interaction Matrix-Based Affine Invariant Mismatch Removal for Partial-Duplicate Image Search.

    PubMed

    Lin, Yang; Lin, Zhouchen; Zha, Hongbin

    2017-02-01

    Mismatch removal is a key step in many computer vision problems. In this paper, we handle the mismatch removal problem by adopting shape interaction matrix (SIM). Given the homogeneous coordinates of the two corresponding point sets, we first compute the SIMs of the two point sets. Then, we detect the mismatches by picking out the most different entries between the two SIMs. Even under strong affine transformations, outliers, noises, and burstiness, our method can still work well. Actually, this paper is the first non-iterative mismatch removal method that achieves affine invariance. Extensive results on synthetic 2D points matching data sets and real image matching data sets verify the effectiveness, efficiency, and robustness of our method in removing mismatches. Moreover, when applied to partial-duplicate image search, our method reaches higher retrieval precisions with shorter time cost compared with the state-of-the-art geometric verification methods.

  5. "Do Users Do What They Think They Do?"- A Comparative Study of User Perceived and Actual Information Searching Behaviour in the National Electronic Library of Infection

    NASA Astrophysics Data System (ADS)

    Roy, Anjana; Kostkova, Patty; Catchpole, Mike; Carson, Ewart

    In the last decade, the Internet has profoundly changed the delivery of healthcare. Medical websites for professionals and patients are playing an increasingly important role in providing the latest evidence-based knowledge for professionals, facilitating virtual patient support groups, and providing an invaluable information source for patients. Information seeking is the key user activity on the Internet. However, the discrepancy between what information is available and what the user is able to find has a profound effect on user satisfaction. The UK National electronic Library of Infection (NeLI, www.neli.org.uk) and its subsidiary projects provide a single-access portal for quality-appraised evidence in infectious diseases. We use this national portal, as test-bed for investigating our research questions. In this paper, we investigate actual and perceived user navigation behaviour that reveals important information about user perceptions and actions, in searching for information. Our results show: (i) all users were able to access information they were seeking; (ii) broadly, there is an agreement between "reported" behaviour (from questionnaires) and "observed" behaviour (from web logs), although some important differences were identified; (iii) both browsing and searching were equally used to answer specific questions and (iv) the preferred route for browsing for data on the NeLI website was to enter via the "Top Ten Topics" menu option. These findings provide important insights into how to improve user experience and satisfaction with health information websites.

  6. Search for satellites near comet 67P/Churyumov-Gerasimenko using Rosetta/OSIRIS images

    NASA Astrophysics Data System (ADS)

    Bertini, I.; Gutiérrez, P. J.; Lara, L. M.; Marzari, F.; Moreno, F.; Pajola, M.; La Forgia, F.; Sierks, H.; Barbieri, C.; Lamy, P.; Rodrigo, R.; Koschny, D.; Rickman, H.; Keller, H. U.; Agarwal, J.; A'Hearn, M. F.; Barucci, M. A.; Bertaux, J.-L.; Cremonese, G.; Da Deppo, V.; Davidsson, B.; Debei, S.; De Cecco, M.; Ferri, F.; Fornasier, S.; Fulle, M.; Giacomini, L.; Groussin, O.; Güttler, C.; Hviid, S. F.; Ip, W.-H.; Jorda, L.; Knollenberg, J.; Kramm, J. R.; Kührt, E.; Küppers, M.; Lazzarin, M.; Lopez Moreno, J. J.; Magrin, S.; Massironi, M.; Michalik, H.; Mottola, S.; Naletto, G.; Oklay, N.; Thomas, N.; Tubiana, C.; Vincent, J.-B.

    2015-11-01

    Context. TheEuropean Space Agency Rosetta mission reached and started escorting its main target, the Jupiter-family comet 67P/Churyumov-Gerasimenko, at the beginning of August 2014. Within the context of solar system small bodies, satellite searches from approaching spacecraft were extensively used in the past to study the nature of the visited bodies and their collisional environment. Aims: During the approaching phase to the comet in July 2014, the OSIRIS instrument onboard Rosetta performed a campaign aimed at detecting objects in the vicinity of the comet nucleus and at measuring these objects' possible bound orbits. In addition to the scientific purpose, the search also focused on spacecraft security to avoid hazardous material in the comet's environment. Methods: Images in the red spectral domain were acquired with the OSIRIS Narrow Angle Camera, when the spacecraft was at a distance between 5785 km and 5463 km to the comet, following an observational strategy tailored to maximize the scientific outcome. From the acquired images, sources were extracted and displayed to search for plausible displacements of all sources from image to image. After stars were identified, the remaining sources were thoroughly analyzed. To place constraints on the expected displacements of a potential satellite, we performed Monte Carlo simulations on the apparent motion of potential satellites within the Hill sphere. Results: We found no unambiguous detections of objects larger than ~6 m within ~20 km and larger than ~1 m between ~20 km and ~110 km from the nucleus, using images with an exposure time of 0.14 s and 1.36 s, respectively. Our conclusions are consistent with independent works on dust grains in the comet coma and on boulders counting on the nucleus surface. Moreover, our analysis shows that the comet outburst detected at the end of April 2014 was not strong enough to eject large objects and to place them into a stable orbit around the nucleus. Our findings underline

  7. Search for temperature-related albedo changes in nightside and posteclipse images of Io

    NASA Astrophysics Data System (ADS)

    Simonelli, D. P.; Boucher, J.; Helfenstein, P.; Veverka, J.; O'Shaughnessy, M.

    1994-02-01

    Using an image-summing process that increases the visibility of Jupiter-lit surface features in Voyager images, we have produced the best-ever violet-filter image of the nightside of Io and the best-ever nightside/dayside brightness ratio map of this jovian moon. The ratio map shows no convincing evidence, on either global or local scales, of diurnal temperature-dependent albedo variations. We have also taken an image-ratioing technique developed by O'Shaughnessy et al. (1989), which those authors applied to Voyager violet-filter observations of one Io eclipse reappearance, and extended it to two other, higher-resolution Voyager posteclipse imaging sequences. In none of three imaging sequences do we find any isolated surface regions that convincingly exhibit posteclipse temperature-related albedo variations. These negative results suggest that on Io, pure cyclo-octasulfur (S8), and transient nighttime or in-eclipse deposits of SO2 frost, are at best limited to isolated areas smaller than the resolution of the images in use (i.e., smaller than a few tens of kilometers in size). Such limits are consistent with (1) the negative results reported by the majority of telescopic observers who have searched for posteclipse brightening of Io, (2) indications that physical processes in the ionian surface environment will change any S8 into other allotropes of sulfur, and (3) suggestions that Io's atmosphere is too thin to allow the deposition of transient, optically thick SO2 frost layers at nighttime or during eclipse.

  8. THE DIFFERENCE IMAGING PIPELINE FOR THE TRANSIENT SEARCH IN THE DARK ENERGY SURVEY

    SciTech Connect

    Kessler, R.; Scolnic, D.; Marriner, J.; Finley, D. A.; Wester, W.; Childress, M.; Yuan, F.; Covarrubias, R.; D’Andrea, C. B.; Nichol, R. C.; Papadopoulos, A.; Fischer, J.; Sako, M.; Foley, R. J.; Goldstein, D.; Gupta, R. R.; Kuehn, K.; Marcha, M.; Smith, M.; Sullivan, M.; Collaboration: DES Collaboration; and others

    2015-12-15

    We describe the operation and performance of the difference imaging pipeline (DiffImg) used to detect transients in deep images from the Dark Energy Survey Supernova program (DES-SN) in its first observing season from 2013 August through 2014 February. DES-SN is a search for transients in which ten 3 deg{sup 2} fields are repeatedly observed in the g, r, i, z passbands with a cadence of about 1 week. The observing strategy has been optimized to measure high-quality light curves and redshifts for thousands of Type Ia supernovae (SNe Ia) with the goal of measuring dark energy parameters. The essential DiffImg functions are to align each search image to a deep reference image, do a pixel-by-pixel subtraction, and then examine the subtracted image for significant positive detections of point-source objects. The vast majority of detections are subtraction artifacts, but after selection requirements and image filtering with an automated scanning program, there are ∼130 detections per deg{sup 2} per observation in each band, of which only ∼25% are artifacts. Of the ∼7500 transients discovered by DES-SN in its first observing season, each requiring a detection on at least two separate nights, Monte Carlo (MC) simulations predict that 27% are expected to be SNe Ia or core-collapse SNe. Another ∼30% of the transients are artifacts in which a small number of observations satisfy the selection criteria for a single-epoch detection. Spectroscopic analysis shows that most of the remaining transients are AGNs and variable stars. Fake SNe Ia are overlaid onto the images to rigorously evaluate detection efficiencies and to understand the DiffImg performance. The DiffImg efficiency measured with fake SNe agrees well with expectations from a MC simulation that uses analytical calculations of the fluxes and their uncertainties. In our 8 “shallow” fields with single-epoch 50% completeness depth ∼23.5, the SN Ia efficiency falls to 1/2 at redshift z ≈ 0.7; in our 2

  9. The Difference Imaging Pipeline for the Transient Search in the Dark Energy Survey

    SciTech Connect

    Kessler, R.

    2015-09-09

    We describe the operation and performance of the difference imaging pipeline (DiffImg) used to detect transients in deep images from the Dark Energy Survey Supernova program (DES-SN) in its first observing season from 2013 August through 2014 February. DES-SN is a search for transients in which ten 3 deg2 fields are repeatedly observed in the g, r, i, zpassbands with a cadence of about 1 week. Our observing strategy has been optimized to measure high-quality light curves and redshifts for thousands of Type Ia supernovae (SNe Ia) with the goal of measuring dark energy parameters. The essential DiffImg functions are to align each search image to a deep reference image, do a pixel-by-pixel subtraction, and then examine the subtracted image for significant positive detections of point-source objects. The vast majority of detections are subtraction artifacts, but after selection requirements and image filtering with an automated scanning program, there are ~130 detections per deg2 per observation in each band, of which only ~25% are artifacts. Of the ~7500 transients discovered by DES-SN in its first observing season, each requiring a detection on at least two separate nights, Monte Carlo (MC) simulations predict that 27% are expected to be SNe Ia or core-collapse SNe. Another ~30% of the transients are artifacts in which a small number of observations satisfy the selection criteria for a single-epoch detection. Spectroscopic analysis shows that most of the remaining transients are AGNs and variable stars. Fake SNe Ia are overlaid onto the images to rigorously evaluate detection efficiencies and to understand the DiffImg performance. Furthermore, the DiffImg efficiency measured with fake SNe agrees well with expectations from a MC simulation that uses analytical calculations of the fluxes and their uncertainties. In our 8 "shallow" fields with single-epoch 50% completeness depth ~23.5, the SN Ia efficiency falls to 1/2 at redshift z ≈ 0.7; in our

  10. The Difference Imaging Pipeline for the Transient Search in the Dark Energy Survey

    DOE PAGES

    Kessler, R.

    2015-09-09

    We describe the operation and performance of the difference imaging pipeline (DiffImg) used to detect transients in deep images from the Dark Energy Survey Supernova program (DES-SN) in its first observing season from 2013 August through 2014 February. DES-SN is a search for transients in which ten 3 deg2 fields are repeatedly observed in the g, r, i, zpassbands with a cadence of about 1 week. Our observing strategy has been optimized to measure high-quality light curves and redshifts for thousands of Type Ia supernovae (SNe Ia) with the goal of measuring dark energy parameters. The essential DiffImg functions aremore » to align each search image to a deep reference image, do a pixel-by-pixel subtraction, and then examine the subtracted image for significant positive detections of point-source objects. The vast majority of detections are subtraction artifacts, but after selection requirements and image filtering with an automated scanning program, there are ~130 detections per deg2 per observation in each band, of which only ~25% are artifacts. Of the ~7500 transients discovered by DES-SN in its first observing season, each requiring a detection on at least two separate nights, Monte Carlo (MC) simulations predict that 27% are expected to be SNe Ia or core-collapse SNe. Another ~30% of the transients are artifacts in which a small number of observations satisfy the selection criteria for a single-epoch detection. Spectroscopic analysis shows that most of the remaining transients are AGNs and variable stars. Fake SNe Ia are overlaid onto the images to rigorously evaluate detection efficiencies and to understand the DiffImg performance. Furthermore, the DiffImg efficiency measured with fake SNe agrees well with expectations from a MC simulation that uses analytical calculations of the fluxes and their uncertainties. In our 8 "shallow" fields with single-epoch 50% completeness depth ~23.5, the SN Ia efficiency falls to 1/2 at redshift z ≈ 0.7; in our 2 "deep

  11. The Difference Imaging Pipeline for the Transient Search in the Dark Energy Survey

    NASA Astrophysics Data System (ADS)

    Kessler, R.; Marriner, J.; Childress, M.; Covarrubias, R.; D'Andrea, C. B.; Finley, D. A.; Fischer, J.; Foley, R. J.; Goldstein, D.; Gupta, R. R.; Kuehn, K.; Marcha, M.; Nichol, R. C.; Papadopoulos, A.; Sako, M.; Scolnic, D.; Smith, M.; Sullivan, M.; Wester, W.; Yuan, F.; Abbott, T.; Abdalla, F. B.; Allam, S.; Benoit-Lévy, A.; Bernstein, G. M.; Bertin, E.; Brooks, D.; Carnero Rosell, A.; Carrasco Kind, M.; Castander, F. J.; Crocce, M.; da Costa, L. N.; Desai, S.; Diehl, H. T.; Eifler, T. F.; Fausti Neto, A.; Flaugher, B.; Frieman, J.; Gerdes, D. W.; Gruen, D.; Gruendl, R. A.; Honscheid, K.; James, D. J.; Kuropatkin, N.; Li, T. S.; Maia, M. A. G.; Marshall, J. L.; Martini, P.; Miller, C. J.; Miquel, R.; Nord, B.; Ogando, R.; Plazas, A. A.; Reil, K.; Romer, A. K.; Roodman, A.; Sanchez, E.; Sevilla-Noarbe, I.; Smith, R. C.; Soares-Santos, M.; Sobreira, F.; Tarle, G.; Thaler, J.; Thomas, R. C.; Tucker, D.; Walker, A. R.; DES Collaboration

    2015-12-01

    We describe the operation and performance of the difference imaging pipeline (DiffImg) used to detect transients in deep images from the Dark Energy Survey Supernova program (DES-SN) in its first observing season from 2013 August through 2014 February. DES-SN is a search for transients in which ten 3 deg2 fields are repeatedly observed in the g, r, i, z passbands with a cadence of about 1 week. The observing strategy has been optimized to measure high-quality light curves and redshifts for thousands of Type Ia supernovae (SNe Ia) with the goal of measuring dark energy parameters. The essential DiffImg functions are to align each search image to a deep reference image, do a pixel-by-pixel subtraction, and then examine the subtracted image for significant positive detections of point-source objects. The vast majority of detections are subtraction artifacts, but after selection requirements and image filtering with an automated scanning program, there are ˜130 detections per deg2 per observation in each band, of which only ˜25% are artifacts. Of the ˜7500 transients discovered by DES-SN in its first observing season, each requiring a detection on at least two separate nights, Monte Carlo (MC) simulations predict that 27% are expected to be SNe Ia or core-collapse SNe. Another ˜30% of the transients are artifacts in which a small number of observations satisfy the selection criteria for a single-epoch detection. Spectroscopic analysis shows that most of the remaining transients are AGNs and variable stars. Fake SNe Ia are overlaid onto the images to rigorously evaluate detection efficiencies and to understand the DiffImg performance. The DiffImg efficiency measured with fake SNe agrees well with expectations from a MC simulation that uses analytical calculations of the fluxes and their uncertainties. In our 8 “shallow” fields with single-epoch 50% completeness depth ˜23.5, the SN Ia efficiency falls to 1/2 at redshift z ≈ 0.7; in our 2 “deep” fields with

  12. Laptop Computer Use in the Health Sciences Library.

    ERIC Educational Resources Information Center

    Powell, Tracy E.

    1992-01-01

    Describes the use of laptop computers by reference librarians at the East Carolina University Health Sciences Library. Topics discussed include computer selection; online searching; office space utilization; the professional image of librarians; security measures; expansion capabilities; and the development of a local area network. (LRW)

  13. A systematic search for undiscovered companions to near-Earth asteroids in radar images

    NASA Astrophysics Data System (ADS)

    Bowman, M. Oliver; Margot, Jean-Luc

    2015-11-01

    Radar observations have been paramount to the characterization of small (<20 km) Near-Earth Objects (NEOs), specifically with regards to asteroid trajectories, shapes, spins, and multi-component systems. Binary systems make up a sizable fraction (~16%) of the asteroid population in near-Earth space. Their formation process is understood to be rotational fission caused by the YORP effect. Possible outcomes of post-fission dynamics include contact binaries, tightly and loosely bound binaries, and asteroid pairs. Radar images have been used to identify asteroid satellites that orbit near the primary component, but relatively little attention has been paid to the detection of more distant satellites. We are conducting a systematic search for faint and/or distant satellites in the Arecibo radar data archive. To this end, we have developed a software package to identify candidate objects in radar images and to differentiate these candidates from background noise using statistical analysis; preliminary results of the search will be presented at the meeting. Possible future applications include systematic measurements of asteroid radar properties (e.g., Doppler and range extents) that could become part of an automated data reduction pipeline.

  14. Olfactory search-image use by a mosquito-eating predator

    PubMed Central

    Cross, Fiona R.; Jackson, Robert R.

    2010-01-01

    By choosing blood-carrying mosquitoes as prey, Evarcha culicivora, an East African salticid spider, specializes at feeding indirectly on vertebrate blood. It also has an exceptionally complex mate-choice system. An earlier study revealed that search-image use assists E. culicivora in finding prey and mates when restricted to using vision alone. Here we show that search-image use assists E. culicivora in finding prey and mates when restricted to using olfaction alone. After being primed with prey odour or mate odour (control: not primed with odour), spiders were transferred to an olfactometer designed to test ability to find a prey-odour or mate-odour source that was either ‘cryptic’ (i.e. accompanied by a masking odour source, Lantana camara) or ‘conspicuous’ (no L. camara odour). When tested with conspicuous odour, the identity of the priming odour had no significant effect on how many spiders found the odour source. However, when tested with cryptic odour, significantly more spiders found the odour source when primed with congruent odour and significantly fewer spiders found the odour source when primed with incongruent odour. PMID:20504813

  15. Automatic cytoplasm and nuclei segmentation for color cervical smear image using an efficient gap-search MRF.

    PubMed

    Zhao, Lili; Li, Kuan; Wang, Mao; Yin, Jianping; Zhu, En; Wu, Chengkun; Wang, Siqi; Zhu, Chengzhang

    2016-04-01

    Accurate and effective cervical smear image segmentation is required for automated cervical cell analysis systems. Thus, we proposed a novel superpixel-based Markov random field (MRF) segmentation framework to acquire the nucleus, cytoplasm and image background of cell images. We seek to classify color non-overlapping superpixel-patches on one image for image segmentation. This model describes the whole image as an undirected probabilistic graphical model and was developed using an automatic label-map mechanism for determining nuclear, cytoplasmic and background regions. A gap-search algorithm was designed to enhance the model efficiency. Data show that the algorithms of our framework provide better accuracy for both real-world and the public Herlev datasets. Furthermore, the proposed gap-search algorithm of this model is much more faster than pixel-based and superpixel-based algorithms.

  16. Medical literature search dot com.

    PubMed

    Jain, Vivek; Raut, Deepak K

    2011-01-01

    The Internet provides a quick access to a plethora of the medical literature, in the form of journals, databases, dictionaries, textbooks, indexes, and e-journals, thereby allowing access to more varied, individualized, and systematic educational opportunities. Web search engine is a tool designed to search for information on the World Wide Web, which may be in the form of web pages, images, information, and other types of files. Search engines for internet-based search of medical literature include Google, Google scholar, Yahoo search engine, etc., and databases include MEDLINE, PubMed, MEDLARS, etc. Commercial web resources (Medscape, MedConnect, MedicineNet) add to the list of resource databases providing some of their content for open access. Several web-libraries (Medical matrix, Emory libraries) have been developed as meta-sites, providing useful links to health resources globally. Availability of specific dermatology-related websites (DermIs, DermNet, and Genamics Jornalseek) is useful addition to the ever growing list of web-based resources. A researcher must keep in mind the strengths and limitations of a particular search engine/database while searching for a particular type of data. Knowledge about types of literature and levels of detail available, user interface, ease of access, reputable content, and period of time covered allow their optimal use and maximal utility in the field of medicine.

  17. Library Synthesis, Screening, and Discovery of Modified Zinc(II)-Bis(dipicolylamine) Probe for Enhanced Molecular Imaging of Cell Death

    PubMed Central

    2015-01-01

    Zinc(II)-bis(dipicolylamine) (Zn-BDPA) coordination complexes selectively target the surfaces of dead and dying mammalian cells, and they have promise as molecular probes for imaging cell death. A necessary step toward eventual clinical imaging applications is the development of next-generation Zn-BDPA complexes with enhanced affinity for the cell death membrane biomarker, phosphatidylserine (PS). This study employed an iterative cycle of library synthesis and screening, using a novel rapid equilibrium dialysis assay, to discover a modified Zn-BDPA structure with high and selective affinity for vesicles containing PS. The lead structure was converted into a deep-red fluorescent probe and its targeting and imaging performance was compared with an unmodified control Zn-BDPA probe. The evaluation process included a series of FRET-based vesicle titration studies, cell microscopy experiments, and rat tumor biodistribution measurements. In all cases, the modified probe exhibited comparatively higher affinity and selectivity for the target membranes of dead and dying cells. The results show that this next-generation deep-red fluorescent Zn-BDPA probe is well suited for preclinical molecular imaging of cell death in cell cultures and animal models. Furthermore, it should be possible to substitute the deep-red fluorophore with alternative reporter groups that enable clinically useful, deep-tissue imaging modalities, such as MRI and nuclear imaging. PMID:24575875

  18. Describing Images: A Case Study of Visual Literacy among Library and Information Science Students

    ERIC Educational Resources Information Center

    Beaudoin, Joan E.

    2016-01-01

    This paper reports on a study that examined the development of pedagogical methods for increasing the visual literacy skills of a group of library and information science students. Through a series of three assignments, students were asked to provide descriptive information for a set of historical photographs and record reflections on their…

  19. Searching for a traveling feature in Saturn's rings in Cassini Imaging Science Subsystem data

    NASA Astrophysics Data System (ADS)

    Aye, Klaus-Michael; Rehnberg, Morgan; Brown, Zarah; Esposito, Larry W.

    2016-10-01

    Introduction: Using Cassini UVIS occultation data, a traveling wave feature has been identified in the Saturn rings that is most likely caused by the radial positions swap of the moons Janus and Epimetheus [1]. The hypothesis is that non-linear interferences between the linear density waves when being relocated by the moon swap create a solitary wave that is traveling outward through the rings. The observations in [1] further lead to the derivation of values for the radial travel speeds of the identified traveling features, from 39.6 km/yr for the Janus 5:4 resonance up to 45.8 for the Janus 4:3 resonance.Previous confirmations in ISS data: Work in [1] also identified the feature in Cassini Imaging Science Subsystem (ISS) data that was taken around the time of the UVIS occultations where the phenomenon was first discovered, so far one ISS image for each Janus resonances 2:1, 4:3, 5:4, and 6:5.Search guided by predicted locations: Using the observation-fitted radial velocities from [1], we can extrapolate these to identify Saturn radii at which the traveling feature should be found at later times. Using this and new image analysis and plotting tools available in [2], we have identified a potential candidate feature in an ISS image that was taken 2.5 years after the feature causing moon swap in January 2006. We intend to expand our search by identifying candidate ISS data by a meta-database search constraining the radius at future times corresponding to the predicted future locations of the hypothesized solitary wave and present our findings at this conference.References: [1] Rehnberg, M.E., Esposito, L.W., Brown, Z.L., Albers, N., Sremčević, M., Stewart, G.R., 2016. A Traveling Feature in Saturn's Rings. Icarus, accepted in June 2016. [2] K.-Michael Aye. (2016). pyciss: v0.5.0. Zenodo. 10.5281/zenodo.53092

  20. Fully Polarimetric Passive W-band Millimeter Wave Imager for Wide Area Search

    SciTech Connect

    Tedeschi, Jonathan R.; Bernacki, Bruce E.; Sheen, David M.; Kelly, James F.; McMakin, Douglas L.

    2013-09-27

    We describe the design and phenomenology imaging results of a fully polarimetric W-band millimeter wave (MMW) radiometer developed by Pacific Northwest National Laboratory for wide-area search. Operating from 92 - 94 GHz, the W-band radiometer employs a Dicke switching heterodyne design isolating the horizontal and vertical mm-wave components with 40 dB of polarization isolation. Design results are presented for both infinite conjugate off-axis parabolic and finite conjugate off-axis elliptical fore-optics using optical ray tracing and diffraction calculations. The received linear polarizations are down-converted to a microwave frequency band and recombined in a phase-shifting network to produce all six orthogonal polarization states of light simultaneously, which are used to calculate the Stokes parameters for display and analysis. The resulting system performance produces a heterodyne receiver noise equivalent delta temperature (NEDT) of less than 150m Kelvin. The radiometer provides novel imaging capability by producing all four of the Stokes parameters of light, which are used to create imagery based on the polarization states associated with unique scattering geometries and their interaction with the down welling MMW energy. The polarization states can be exploited in such a way that man-made objects can be located and highlighted in a cluttered scene using methods such as image comparison, color encoding of Stokes parameters, multivariate image analysis, and image fusion with visible and infrared imagery. We also present initial results using a differential imaging approach used to highlight polarization features and reduce common-mode noise. Persistent monitoring of a scene using the polarimetric passive mm-wave technique shows great promise for anomaly detection caused by human activity.

  1. Fermilab Library projects

    SciTech Connect

    Garrett, P.; Ritchie, D.

    1990-05-03

    Preprint database management as done at various centers -- the subject of this workshop -- is hard to separate from the overall activities of the particular center. We therefore present the wider context at the Fermilab Library into which preprint database management fits. The day-to-day activities of the Library aside, the dominant activity at present is that of the ongoing Fermilab Library Automation. A less dominant but relatively time-consuming activity is that of doing more online searches in commercial databases on behalf of laboratory staff and visitors. A related activity is that of exploring the benefits of end-user searching of similar sources as opposed to library staff searching of the same. The Library Automation Project, which began about two years ago, is about to go fully online.'' The rationale behind this project is described in the documents developed during the December 1988--February 1989 planning phase.

  2. Using argumentation to retrieve articles with similar citations: an inquiry into improving related articles search in the MEDLINE digital library.

    PubMed

    Tbahriti, Imad; Chichester, Christine; Lisacek, Frédérique; Ruch, Patrick

    2006-06-01

    The aim of this study is to investigate the relationships between citations and the scientific argumentation found abstracts. We design a related article search task and observe how the argumentation can affect the search results. We extracted citation lists from a set of 3200 full-text papers originating from a narrow domain. In parallel, we recovered the corresponding MEDLINE records for analysis of the argumentative moves. Our argumentative model is founded on four classes: PURPOSE, METHODS, RESULTS and CONCLUSION. A Bayesian classifier trained on explicitly structured MEDLINE abstracts generates these argumentative categories. The categories are used to generate four different argumentative indexes. A fifth index contains the complete abstract, together with the title and the list of Medical Subject Headings (MeSH) terms. To appraise the relationship of the moves to the citations, the citation lists were used as the criteria for determining relatedness of articles, establishing a benchmark; it means that two articles are considered as "related" if they share a significant set of co-citations. Our results show that the average precision of queries with the PURPOSE and CONCLUSION features is the highest, while the precision of the RESULTS and METHODS features was relatively low. A linear weighting combination of the moves is proposed, which significantly improves retrieval of related articles.

  3. Image management research

    NASA Technical Reports Server (NTRS)

    Watson, Andrew B.

    1988-01-01

    Two types of research issues are involved in image management systems with space station applications: image processing research and image perception research. The image processing issues are the traditional ones of digitizing, coding, compressing, storing, analyzing, and displaying, but with a new emphasis on the constraints imposed by the human perceiver. Two image coding algorithms have been developed that may increase the efficiency of image management systems (IMS). Image perception research involves a study of the theoretical and practical aspects of visual perception of electronically displayed images. Issues include how rapidly a user can search through a library of images, how to make this search more efficient, and how to present images in terms of resolution and split screens. Other issues include optimal interface to an IMS and how to code images in a way that is optimal for the human perceiver. A test-bed within which such issues can be addressed has been designed.

  4. Exploring Library 2.0 on the Social Web

    ERIC Educational Resources Information Center

    Brantley, John S.

    2010-01-01

    Library 2.0 literature has described many of the possibilities Web 2.0 technologies offer to libraries. Case studies have assessed local use, but no studies have measured the Library 2.0 phenomenon by searching public social networking sites. This study used library-specific terms to search public social networking sites, blog search engines, and…

  5. Developing a UHPLC-QTOF-MS and Automated Library Search Method for Screening Drugs and Toxic Compounds in Postmortem Specimens.

    PubMed

    Liu, Hsiu-Chuan; Yang, Chu-An; Liu, Ray H; Lin, Dong-Liang

    2017-03-24

    Screening and confirming the presence of drugs and toxic compounds in various matrices are important and challenging tasks routinely faced by forensic and clinical laboratories. Recent advances in the liquid chromatographic and mass spectrometric technologies have provided an opportunity for the development of more specific and effective approaches to achieve the "screening" and "confirmation" goals in a single analytical step. The objectives of this study are: (i) the establishment of an ultra-high performance liquid chromatographic, quadrupole time-of-flight mass spectrometric mass spectrometric and MS-MS spectral database, including 1,200 compounds of interest; and (ii) the development of an effective protocol, using this database and three searching algorithms, for general unknown screening of these compounds. The established database and protocol were evaluated through the analysis of 30 external proficiency test and 100 postmortem samples and found to be significantly more effective than the LC-IT-MS and GC-MS approaches previously established in our laboratory.

  6. Real-time sound speed correction using golden section search to enhance ultrasound imaging quality

    NASA Astrophysics Data System (ADS)

    Yoon, Chong Ook; Yoon, Changhan; Yoo, Yangmo; Song, Tai-Kyong; Chang, Jin Ho

    2013-03-01

    In medical ultrasound imaging, high-performance beamforming is important to enhance spatial and contrast resolutions. A modern receive dynamic beamfomer uses a constant sound speed that is typically assumed to 1540 m/s in generating receive focusing delays [1], [2]. However, this assumption leads to degradation of spatial and contrast resolutions particularly when imaging obese patients or breast since the sound speed is significantly lower than the assumed sound speed [3]; the true sound speed in the fatty tissue is around 1450 m/s. In our previous study, it was demonstrated that the modified nonlinear anisotropic diffusion is capable of determining an optimal sound speed and the proposed method is a useful tool to improve ultrasound image quality [4], [5]. In the previous study, however, we utilized at least 21 iterations to find an optimal sound speed, which may not be viable for real-time applications. In this paper, we demonstrates that the number of iterations can be dramatically reduced using the GSS(golden section search) method with a minimal error. To evaluate performances of the proposed method, in vitro experiments were conducted with a tissue mimicking phantom. To emulate a heterogeneous medium, the phantom was immersed in the water. From the experiments, the number of iterations was reduced from 21 to 7 with GSS method and the maximum error of the lateral resolution between direct and GSS was less than 1%. These results indicate that the proposed method can be implemented in real time to improve the image quality in the medical ultrasound imaging.

  7. XML in Libraries.

    ERIC Educational Resources Information Center

    Tennant, Roy, Ed.

    This book presents examples of how libraries are using XML (eXtensible Markup Language) to solve problems, expand services, and improve systems. Part I contains papers on using XML in library catalog records: "Updating MARC Records with XMLMARC" (Kevin S. Clarke, Stanford University) and "Searching and Retrieving XML Records via the…

  8. Automatic hip cartilage segmentation from 3D MR images using arc-weighted graph searching.

    PubMed

    Xia, Ying; Chandra, Shekhar S; Engstrom, Craig; Strudwick, Mark W; Crozier, Stuart; Fripp, Jurgen

    2014-12-07

    Accurate segmentation of hip joint cartilage from magnetic resonance (MR) images offers opportunities for quantitative investigations of pathoanatomical conditions such as osteoarthritis. In this paper, we present a fully automatic scheme for the segmentation of the individual femoral and acetabular cartilage plates in the human hip joint from high-resolution 3D MR images. The developed scheme uses an improved optimal multi-object multi-surface graph search framework with an arc-weighted graph representation that incorporates prior morphological knowledge as a basis for segmentation of the individual femoral and acetabular cartilage plates despite weak or incomplete boundary interfaces. This automated scheme was validated against manual segmentations from 3D true fast imaging with steady-state precession (TrueFISP) MR examinations of the right hip joints in 52 asymptomatic volunteers. Compared with expert manual segmentations of the combined, femoral and acetabular cartilage volumes, the automatic scheme obtained mean (± standard deviation) Dice's similarity coefficients of 0.81 (± 0.03), 0.79 (± 0.03) and 0.72 (± 0.05). The corresponding mean absolute volume difference errors were 8.44% (± 6.36), 9.44% (± 7.19) and 9.05% (± 8.02). The mean absolute differences between manual and automated measures of cartilage thickness for femoral and acetabular cartilage plates were 0.13 mm (± 0.12) and 0.11 mm (± 0.11), respectively.

  9. Local search for optimal global map generation using mid-decadal landsat images

    USGS Publications Warehouse

    Khatib, L.; Gasch, J.; Morris, Robert; Covington, S.

    2007-01-01

    NASA and the US Geological Survey (USGS) are seeking to generate a map of the entire globe using Landsat 5 Thematic Mapper (TM) and Landsat 7 Enhanced Thematic Mapper Plus (ETM+) sensor data from the "mid-decadal" period of 2004 through 2006. The global map is comprised of thousands of scene locations and, for each location, tens of different images of varying quality to chose from. Furthermore, it is desirable for images of adjacent scenes be close together in time of acquisition, to avoid obvious discontinuities due to seasonal changes. These characteristics make it desirable to formulate an automated solution to the problem of generating the complete map. This paper formulates a Global Map Generator problem as a Constraint Optimization Problem (GMG-COP) and describes an approach to solving it using local search. Preliminary results of running the algorithm on image data sets are summarized. The results suggest a significant improvement in map quality using constraint-based solutions. Copyright ?? 2007, Association for the Advancement of Artificial Intelligence (www.aaai.org). All rights reserved.

  10. Web-Based Library and Algorithm System for Satellite and Airborne Image Products

    DTIC Science & Technology

    2011-01-01

    the spectrum matching approach to inverting hyperspectral imagery created by Drs. C. Mobley ( Sequoia Scientific) and P. Bissett (FERI). 5...matching algorithms developed by Sequoia Scientific and FERI. Testing and Implementation of Library This project will result in the delivery of a...transitioning VSW algorithms developed by Dr. Curtis D. Mobley at Sequoia Scientific, Inc., and Dr. Paul Bissett at FERI, under other 6.1/6.2 program funding.

  11. Electronic biomedical literature search for budding researcher.

    PubMed

    Thakre, Subhash B; Thakre S, Sushama S; Thakre, Amol D

    2013-09-01

    Search for specific and well defined literature related to subject of interest is the foremost step in research. When we are familiar with topic or subject then we can frame appropriate research question. Appropriate research question is the basis for study objectives and hypothesis. The Internet provides a quick access to an overabundance of the medical literature, in the form of primary, secondary and tertiary literature. It is accessible through journals, databases, dictionaries, textbooks, indexes, and e-journals, thereby allowing access to more varied, individualised, and systematic educational opportunities. Web search engine is a tool designed to search for information on the World Wide Web, which may be in the form of web pages, images, information, and other types of files. Search engines for internet-based search of medical literature include Google, Google scholar, Scirus, Yahoo search engine, etc., and databases include MEDLINE, PubMed, MEDLARS, etc. Several web-libraries (National library Medicine, Cochrane, Web of Science, Medical matrix, Emory libraries) have been developed as meta-sites, providing useful links to health resources globally. A researcher must keep in mind the strengths and limitations of a particular search engine/database while searching for a particular type of data. Knowledge about types of literature, levels of evidence, and detail about features of search engine as available, user interface, ease of access, reputable content, and period of time covered allow their optimal use and maximal utility in the field of medicine. Literature search is a dynamic and interactive process; there is no one way to conduct a search and there are many variables involved. It is suggested that a systematic search of literature that uses available electronic resource effectively, is more likely to produce quality research.

  12. Security Analysis of Image Encryption Based on Gyrator Transform by Searching the Rotation Angle with Improved PSO Algorithm.

    PubMed

    Sang, Jun; Zhao, Jun; Xiang, Zhili; Cai, Bin; Xiang, Hong

    2015-08-05

    Gyrator transform has been widely used for image encryption recently. For gyrator transform-based image encryption, the rotation angle used in the gyrator transform is one of the secret keys. In this paper, by analyzing the properties of the gyrator transform, an improved particle swarm optimization (PSO) algorithm was proposed to search the rotation angle in a single gyrator transform. Since the gyrator transform is continuous, it is time-consuming to exhaustedly search the rotation angle, even considering the data precision in a computer. Therefore, a computational intelligence-based search may be an alternative choice. Considering the properties of severe local convergence and obvious global fluctuations of the gyrator transform, an improved PSO algorithm was proposed to be suitable for such situations. The experimental results demonstrated that the proposed improved PSO algorithm can significantly improve the efficiency of searching the rotation angle in a single gyrator transform. Since gyrator transform is the foundation of image encryption in gyrator transform domains, the research on the method of searching the rotation angle in a single gyrator transform is useful for further study on the security of such image encryption algorithms.

  13. MINET in K.C.: A Report on the Kansas City Libraries Metropolitan Online Bibliographic Network.

    ERIC Educational Resources Information Center

    And Others; Byrd, Gary D.

    1979-01-01

    Summarizes use statistics for the first year of search activity for the Kansas City Libraries Metropolitan Information Network (MINET). Included are databases searched, types of participating libraries, patron status, search systems used, charges, nonpaid searches, and referrals. (SW)

  14. Searching for Planet Nine with Coadded WISE and NEOWISE-Reactivation Images

    NASA Astrophysics Data System (ADS)

    Meisner, Aaron M.; Bromley, Benjamin C.; Nugent, Peter E.; Schlegel, David J.; Kenyon, Scott J.; Schlafly, Edward F.; Dawson, Kyle S.

    2017-02-01

    A distant, as yet unseen ninth planet has been invoked to explain various observations of the outer solar system. While such a “Planet Nine,” if it exists, is most likely to be discovered via reflected light in the optical, it may emit much more strongly at 3‑5 μm than simple blackbody predictions would suggest, depending on its atmospheric properties. As a result, Planet Nine may be detectable at 3.4 μm with the Wide-field Infrared Survey Explorer, but single exposures are too shallow except at relatively small distances ({d}9≲ 430 au). We develop a method to search for Planet Nine far beyond the W1 single-exposure sensitivity, to distances as large as 800 au, using inertial coadds of W1 exposures binned into ∼1 day intervals. We apply our methodology to a ∼2000 square degree testbed sky region which overlaps a southern segment of Planet Nine’s anticipated orbital path. We do not detect a plausible Planet Nine candidate, but are able to derive a detailed completeness curve, ruling out its presence within the parameter space searched at W1 < 16.66 (90% completeness). Our method uses all publicly available W1 imaging, spanning 2010 January to 2015 December, and will become more sensitive with future NEOWISE-Reactivation releases of additional W1 exposures. We anticipate that our method will be applicable to the entire high Galactic latitude sky, and we will extend our search to that full footprint in the near future.

  15. The impact of complaint management and service quality on organizational image: A case study at the Malaysian public university library

    NASA Astrophysics Data System (ADS)

    Tan, Pei Kian; Mohd Suradi, Nur Riza; Saludin, Mohamad Nasir

    2013-04-01

    Service failure frequently occurs. This affects customer expectations which lead to complaint. However, not all dissatisfied customers actually complain. Without customer feedback, it would be impossible for a company to know whether they needed a change for improvement. Thus, complaint management brings a learning experience to organization in order to provide better service. Therefore, it is important to identify customer dissatisfaction through a systematic complaint handling or management. The study proposes a model of systematic complaint management which applied to academic library as a tool of service recovery. As such, the main purpose of this study is to investigate the critical success factors of complaint management towards service quality, customer satisfaction, customer loyalty and the impact to organizational image at academic library. Three academic libraries have been identified and selected for this project, the Library of Tun Sri Lanang, UKM, UTeM and UNIMAS. Using the justice theory, this study investigates the perception of customers on complaint management in terms of outcomes they receive, procedures used by organization and interpersonal treatment. In this study, there are five factors of complaint management identified, which includes speed of recovery, management system, empowerment, culture and psychology and tangible compensation. A questionnaire was designed and used as the data gathering instrument. A total of 600 respondents participated in this study. Ten hypotheses were used to test the relationships between complaint management, service quality, customer satisfaction, customer loyalty and organizational image. To measure the construct relationships, Structural Equation Model (SEM) approach was used. The results show that management system (b = 0.210; p < 0.05) exerts the highest positive impact on service quality. It followed by psychology and culture (b = 0.188; p < 0.05), empowerment (b = 0.179; p < 0.05) and tangible compensation

  16. A Method for Estimating View Transformations from Image Correspondences Based on the Harmony Search Algorithm.

    PubMed

    Cuevas, Erik; Díaz, Margarita

    2015-01-01

    In this paper, a new method for robustly estimating multiple view relations from point correspondences is presented. The approach combines the popular random sampling consensus (RANSAC) algorithm and the evolutionary method harmony search (HS). With this combination, the proposed method adopts a different sampling strategy than RANSAC to generate putative solutions. Under the new mechanism, at each iteration, new candidate solutions are built taking into account the quality of the models generated by previous candidate solutions, rather than purely random as it is the case of RANSAC. The rules for the generation of candidate solutions (samples) are motivated by the improvisation process that occurs when a musician searches for a better state of harmony. As a result, the proposed approach can substantially reduce the number of iterations still preserving the robust capabilities of RANSAC. The method is generic and its use is illustrated by the estimation of homographies, considering synthetic and real images. Additionally, in order to demonstrate the performance of the proposed approach within a real engineering application, it is employed to solve the problem of position estimation in a humanoid robot. Experimental results validate the efficiency of the proposed method in terms of accuracy, speed, and robustness.

  17. A Method for Estimating View Transformations from Image Correspondences Based on the Harmony Search Algorithm

    PubMed Central

    Cuevas, Erik; Díaz, Margarita

    2015-01-01

    In this paper, a new method for robustly estimating multiple view relations from point correspondences is presented. The approach combines the popular random sampling consensus (RANSAC) algorithm and the evolutionary method harmony search (HS). With this combination, the proposed method adopts a different sampling strategy than RANSAC to generate putative solutions. Under the new mechanism, at each iteration, new candidate solutions are built taking into account the quality of the models generated by previous candidate solutions, rather than purely random as it is the case of RANSAC. The rules for the generation of candidate solutions (samples) are motivated by the improvisation process that occurs when a musician searches for a better state of harmony. As a result, the proposed approach can substantially reduce the number of iterations still preserving the robust capabilities of RANSAC. The method is generic and its use is illustrated by the estimation of homographies, considering synthetic and real images. Additionally, in order to demonstrate the performance of the proposed approach within a real engineering application, it is employed to solve the problem of position estimation in a humanoid robot. Experimental results validate the efficiency of the proposed method in terms of accuracy, speed, and robustness. PMID:26339228

  18. Rapid screening and confirmation of drugs and toxic compounds in biological specimens using liquid chromatography/ion trap tandem mass spectrometry and automated library search.

    PubMed

    Liu, Hsiu-Chuan; Liu, Ray H; Lin, Dong-Liang; Ho, Hsiu-O

    2010-01-01

    Recent advances in liquid chromatography/tandem mass spectrometry (LC/MS/MS) technology have provided an opportunity for the development of more specific approaches to achieve the 'screen' and 'confirmation' goals in a single analytical step. For this purpose, this study adapts the electrospray ionization ion trap LC/MS/MS instrumentation (LC/ESI-MS/MS) for the screening and confirmation of over 800 drugs and toxic compounds in biological specimens. Liquid-liquid and solid-phase extraction protocols were coupled to LC/ESI-MS/MS using a 1.8-microm particle size analytical column operated at 50 degrees C. Gradient elution of the analytes was conducted using a solvent system composed of methanol and water containing 0.1% formic acid. Positive-ion ESI-MS/MS spectra and retention times for each of the 800 drugs and toxic compounds were first established using 1-10 microg/mL standard solutions. This spectra and retention time information was then transferred to the library and searched by the identification algorithm for the confirmation of compounds found in test specimens - based on retention time matches and scores of fit, reverse fit, and purity resulting from the searching process. The established method was found highly effective when applied to the analyses of postmortem specimens (blood, urine, and hair) and external proficiency test samples provided by the College of American Pathology (CAP). The development of this approach has significantly improved the efficiency of our routine laboratory operation that was based on a two-step (immunoassay and GC/MS) approach in the past.

  19. WEIRD : Wide orbit Exoplanet search with InfraRed Direct imaging

    NASA Astrophysics Data System (ADS)

    Baron, Frédérique; Artigau, Etienne; Rameau, Julien; Lafrenière, David; Albert, Loic; Naud, Marie-Eve; Gagné, Jonathan; Malo, Lison; Doyon, Rene; Beichman, Charles; Delorme, Philippe; Janson, Markus

    2015-12-01

    We currently do not know what does the emission spectrum of a young 1 Jupiter-mass planet look like, as no such object has yet been directly imaged. Arguably, the most useful Jupiter-mass planet would be one that is bound to a star of known age, distance and metallicity but which has an orbit large enough (100-5000 UA) that it can be studied as an "isolated" object. We are therefore searching for the most extreme planetary systems. We are currently gathering a large dataset to try to identify such objects through deep [3.6] and [4.5] imaging from SPITZER and deep seeing-limited J (with Flamingos 2 and WIRCam) and z imaging (with GMOS-S and MegaCam) of all 181 known confirmed members of a known young association (<120 Myr) within 70pc of the Sun. Our study will reveal distant planetary companions, over the reveal distant PMCs up to 5000 AU. AU separation range, through their distinctively red z-J and [4.5]-[3.6] colors. The sensitivity limits of our combined Spitzer+ground-based program will allow detection of planets with masses as low as 1 Mjup with very low contamination rates. Here we present some preliminary results of our survey. This approach is unique in the community and will give us an overview of the architecture of the outer part of planetary systems that were never probed before. Our survey will provide benchmark young Saturn and Jupiter for imaging and spectroscopy with the JWST

  20. Evaluation of Online Searches.

    ERIC Educational Resources Information Center

    Blood, Richard W.

    Based on an analysis of online search evaluation forms collected from all types of U.S. libraries, and a pilot test of a draft evaluation form in selected federal research libraries, this report presents the work of the American Library Association's (ALA's) Machine-Assisted Reference Section (MARS) Committee on Measurement and Evaluation. The…

  1. Losing Libraries, Saving Libraries

    ERIC Educational Resources Information Center

    Miller, Rebecca

    2010-01-01

    This summer, as public libraries continued to get budget hit after budget hit across the country, several readers asked for a comprehensive picture of the ravages of the recession on library service. In partnership with 2010 Movers & Shakers Laura Solomon and Mandy Knapp, Ohio librarians who bought the Losing Libraries domain name,…

  2. Digital Libraries on the Internet.

    ERIC Educational Resources Information Center

    Sharon, Taly; Frank, Ariel J.

    This paper discusses digital libraries on the Internet. The resource repository hierarchy, consisting of two major paradigms, search engines (SEs) and digital libraries, is presented. SEs are classified into three categories: basic-SE, directory, and meta-SE. The following six major characteristics of a library are summarized: collection of data…

  3. Iplt--image processing library and toolkit for the electron microscopy community.

    PubMed

    Philippsen, Ansgar; Schenk, Andreas D; Stahlberg, Henning; Engel, Andreas

    2003-01-01

    We present the foundation for establishing a modular, collaborative, integrated, open-source architecture for image processing of electron microscopy images, named iplt. It is designed around object oriented paradigms and implemented using the programming languages C++ and Python. In many aspects it deviates from classical image processing approaches. This paper intends to motivate developers within the community to participate in this on-going project. The iplt homepage can be found at http://www.iplt.org.

  4. Art Libraries Section. Special Libraries Division. Papers.

    ERIC Educational Resources Information Center

    International Federation of Library Associations, The Hague (Netherlands).

    Papers on art libraries and information services for the arts, which were presented at the 1983 International Federation of Library Associations (IFLA) conference, include: (1) "'I See All': Information Technology and the Universal Availability of Images" by Philip Pacey (United Kingdom); (2) "Online Databases in the Fine Arts"…

  5. SPOTS: Search for Planets Orbiting Two Stars A Direct Imaging Survey for Circumbinary Planets

    NASA Astrophysics Data System (ADS)

    Thalmann, C.; Desidera, S.; Bergfors, C.; Boccaletti, A.; Bonavita, M.; Carson, J. C.; Feldt, M.; Goto, M.; Henning, T.; Janson, M.; Mordasini, C.

    2013-09-01

    Over the last decade, a vast amount of effort has been poured into gaining a better understanding of the fre- quency and diversity of extrasolar planets. Yet, most of these studies focus on single stars, leaving the population of planets in multiple systems poorly explored. This investigational gap persists despite the fact that both theoretical and observational evidence suggest that such systems represent a significant fraction of the overall planet population. With SPOTS, the Search for Planets Orbiting Two Stars, we are now carrying out the first direct imaging campaign dedicated to circumbinary planets. Our long-term goals are to survey 66 spectroscopic binaries in H-band with VLT NaCo and VLT SPHERE over the course of 4-5 years. This will establish first constraints on the wide-orbit circumbinary planet population, and may yield the spectacular first image of a bona fide circumbinary planet. Here we report on the results of the first two years of the SPOTS survey, as well as on our ongoing observation program.

  6. Direct imaging search for planets around low-mass stars and spectroscopic characterization of young exoplanets

    NASA Astrophysics Data System (ADS)

    Bowler, Brendan Peter

    Low--mass stars between 0.1--0.6 M⊙ are the most abundant members our galaxy and may be the most common sites of planet formation, but little is known about the outer architecture of their planetary systems. We have carried out a high-contrast adaptive imaging search for gas giant planets between 1--13 MJup around 122 newly identified young M dwarfs in the solar neighborhood ( ≲ 35 pc). Half of our targets are younger than 145 Myr, and 90% are younger than 580 Myr. After removing 39 resolved stellar binaries, our homogeneous sample of 83 single young M dwarfs makes it the largest imaging search for planets around low--mass stars to date. Our H- and K- band coronagraphic observations with Subaru/HiCIAO and Keck/NIRC2 achieve typical contrasts of 9--13 mag and 12--14 mag at 100, respectively, which corresponds to limiting masses of ˜1--10 M Jup at 10--30 AU for most of our sample. We discovered four brown dwarfs with masses between 25--60 MJup at projected separations of 4--190 AU. Over 100 candidate planets were discovered, nearly all of which were found to be background stars from follow-up second epoch imaging. Our null detection of planets nevertheless provides strong statistical constraints on the occurrence rate of giant planets around M dwarfs. Assuming circular orbits and a logarithmically-flat power law distribution in planet mass and semi--major axis of the form d 2N=(dloga dlogm) infinity m0 a0, we measure an upper limit (at the 95% confidence level) of 8.8% and 12.6% for 1--13 MJup companions between 10--100 AU for hot start and cold start evolutionary models, respectively. For massive gas giant planets in the 5--13 M Jup range like those orbiting HR 8799, GJ 504, and beta Pictoris, we find that fewer than 5.3% (7.8%) of M dwarfs harbor these planets between 10--100 AU for a hot start (cold start) formation scenario. Our best constraints are for brown dwarf companions; the frequency of 13--75 MJup companions between (de--projected) physical

  7. Effect of a concurrent auditory task on visual search performance in a driving-related image-flicker task.

    PubMed

    Richard, Christian M; Wright, Richard D; Ee, Cheryl; Prime, Steven L; Shimizu, Yujiro; Vavrik, John

    2002-01-01

    The effect of a concurrent auditory task on visual search was investigated using an image-flicker technique. Participants were undergraduate university students with normal or corrected-to-normal vision who searched for changes in images of driving scenes that involved either driving-related (e.g., traffic light) or driving-unrelated (e.g., mailbox) scene elements. The results indicated that response times were significantly slower if the search was accompanied by a concurrent auditory task. In addition, slower overall responses to scenes involving driving-unrelated changes suggest that the underlying process affected by the concurrent auditory task is strategic in nature. These results were interpreted in terms of their implications for using a cellular telephone while driving. Actual or potential applications of this research include the development of safer in-vehicle communication devices.

  8. Deep IRAC Imaging Lensing Galaxy Clusters for JWST 'First Light' Search

    NASA Astrophysics Data System (ADS)

    Yan, Haojing; Conselice, Christopher; Windhorst, Rogier; Cohen, Seth; Alpaslan, Mehmet; Zitrin, Adi; Broadhurst, Tom; Frye, Brenda; Driver, Simon; Robotham, Aaron; Hopkins, Andrew; Wyithe, Staurt; Jansen, Rolf; Hathi, Nimish; Mechtley, Matthew; Ryan, Russell; Rutkowski, Michael; Finkelstein, Steven; Koekemoer, Anton

    2016-08-01

    JWST has a key goal to search for First Light objects beyond z>10. Our 110-hr JWST GTO program, 'Webb Medium-Deep Fields' (WMDF), will target both blank and lensed fields to probe both the bright and the faint ends of the galaxy luminosity function at z > 10. While a number of well studied lensing clusters exist, not all of them are optimal for the JWST search of First Light objects, either because of their low Ecliptic latitudes (and hence high Zodiacal background) or because of their strong intra-cluster light (ICL) at the critical curve regions corresponding to the redshifts of interest. For this reason, our WMDF candidate lensing targets will include some recently discovered, high-mass (log[M/Msun] ~ 15) galaxy clusters, which we choose either because of their high Ecliptic latitude (beta > 40 deg) or because of their extreme compactness that minimizes the impact of the ICL. As part of our effort to collect ancillary data for these new systems to finalize the target list, we propose IRAC observations for 13 of them that are lacking sufficient data. These 3.6/4.5um data will be critical for our guaranteed JWST program: (1) they will greatly facilitate the modeling of the straylight that JWST will suffer in 1--5 um (the key range to search for z>10--20 objects), a problem that has recently been identified. If left untreated, such straylight components would severely hamper the detection of faint sources in a lensing field. The JWST observations alone would be difficult to separate the ICL from the straylight at the level needed. (2) the new 3.6/4.5um data will best match our deep optical imaging and spectroscopy at HST, Gemini, LBT and MMT. We will derive accurate photometric redshifts for any lensed background galaxies (at z<6) and most member galaxies in the outskirts, which will be critical in refining the mass profile through strong/weak lensing analysis. Finally, we note that these data will be highly valuable for the study of these clusters themselves

  9. University Faculty Describe Their Use of Moving Images in Teaching and Learning and Their Perceptions of the Library's Role in That Use

    ERIC Educational Resources Information Center

    Otto, Jane Johnson

    2014-01-01

    The moving image plays a significant role in teaching and learning; faculty in a variety of disciplines consider it a crucial component of their coursework. Yet little has been written about how faculty identify, obtain, and use these resources and what role the library plays. This study, which engaged teaching faculty in a dialogue with library…

  10. Library resources on the Internet

    NASA Astrophysics Data System (ADS)

    Buchanan, Nancy L.

    1995-07-01

    Library resources are prevalent on the Internet. Library catalogs, electronic books, electronic periodicals, periodical indexes, reference sources, and U.S. Government documents are available by telnet, Gopher, World Wide Web, and FTP. Comparatively few copyrighted library resources are available freely on the Internet. Internet implementations of library resources can add useful features, such as full-text searching. There are discussion lists, Gophers, and World Wide Web pages to help users keep up with new resources and changes to existing ones. The future will bring more library resources, more types of library resources, and more integrated implementations of such resources to the Internet.

  11. Searching for transits in the WTS with the difference imaging light curves

    NASA Astrophysics Data System (ADS)

    Zendejas Dominguez, Jesus

    2013-12-01

    The search for exo-planets is currently one of the most exiting and active topics in astronomy. Small and rocky planets are particularly the subject of intense research, since if they are suitably located from their host star, they may be warm and potentially habitable worlds. On the other hand, the discovery of giant planets in short-period orbits provides important constraints on models that describe planet formation and orbital migration theories. Several projects are dedicated to discover and characterize planets outside of our solar system. Among them, the Wide-Field Camera Transit Survey (WTS) is a pioneer program aimed to search for extra-solar planets, that stands out for its particular aims and methodology. The WTS has been in operation since August 2007 with observations from the United Kingdom Infrared Telescope, and represents the first survey that searches for transiting planets in the near-infrared wavelengths; hence the WTS is designed to discover planets around M-dwarfs. The survey was originally assigned about 200 nights, observing four fields that were selected seasonally (RA = 03, 07, 17 and 19h) during a year. The images from the survey are processed by a data reduction pipeline, which uses aperture photometry to construct the light curves. For the most complete field (19h-1145 epochs) in the survey, we produce an alternative set of light curves by using the method of difference imaging, which is a photometric technique that has shown important advantages when used in crowded fields. A quantitative comparison between the photometric precision achieved with both methods is carried out in this work. We remove systematic effects using the sysrem algorithm, scale the error bars on the light curves, and perform a comparison of the corrected light curves. The results show that the aperture photometry light curves provide slightly better precision for objects with J < 16. However, difference photometry light curves present a significant improvement for

  12. Search and retrieval of medical images for improved diagnosis of neurodegenerative diseases

    NASA Astrophysics Data System (ADS)

    Ekin, Ahmet; Jasinschi, Radu; Turan, Erman; Engbers, Rene; van der Grond, Jeroen; van Buchem, Mark A.

    2007-01-01

    In the medical world, the accuracy of diagnosis is mainly affected by either lack of sufficient understanding of some diseases or the inter-, and/or intra-observer variability of the diagnoses. The former requires understanding the progress of diseases at much earlier stages, extraction of important information from ever growing amounts of data, and finally finding correlations with certain features and complications that will illuminate the disease progression. The latter (inter-, and intra- observer variability) is caused by the differences in the experience levels of different medical experts (inter-observer variability) or by mental and physical tiredness of one expert (intra-observer variability). We believe that the use of large databases can help improve the current status of disease understanding and decision making. By comparing large number of patients, some of the otherwise hidden relations can be revealed that results in better understanding, patients with similar complications can be found, the diagnosis and treatment can be compared so that the medical expert can make a better diagnosis. To this effect, this paper introduces a search and retrieval system for brain MR databases and shows that brain iron accumulation shape provides additional information to the shape-insensitive features, such as the total brain iron load, that are commonly used in the clinics. We propose to use Kendall's correlation value to automatically compare various returns to a query. We also describe a fully automated and fast brain MR image analysis system to detect degenerative iron accumulation in brain, as it is the case in Alzheimer's and Parkinson's. The system is composed of several novel image processing algorithms and has been extensively tested in Leiden University Medical Center over so far more than 600 patients.

  13. Visual Search of Experts in Medical Image Reading: The Effect of Training, Target Prevalence, and Expert Knowledge

    PubMed Central

    Nakashima, Ryoichi; Kobayashi, Kazufumi; Maeda, Eriko; Yoshikawa, Takeharu; Yokosawa, Kazuhiko

    2013-01-01

    The aims of this study are (a) To determine the effect of training on the multiple-target lesion search performance; and (b) To examine the effect of target prevalence on the performance of radiologists and novices. We conducted four sessions of 500 trials in a lesion search on a medical image task in which participants searched for three different target lesions. Participants were 10 radiologists and novices. In each session, the prevalence of the different target lesions varied from low (2%) to high (40%). The sensitivity of novices was higher in the later sessions than in the first session, whereas there were no differences among sessions in radiologists. The improvement on sensitivity of novices was largely due to attenuations of false alarm (FA) errors. In addition, miss rates of the three targets did not differ in data of novices, whereas radiologists produced a higher miss rate for the highest prevalence target lesion (non-serious lesion) than for the other two lesions (serious lesions). The conclusions are (a) The training for the multiple-target lesion search task can be effective to reduce FA errors; and (b) The prevalence effect on lesion search can be attenuated by the multiple-target identification and the knowledge about seriousness of lesions. This suggests that acquired knowledge about normal cases and serious lesions is an important aspect of a radiologists’ skill in searching for medical lesions and their high performance levels. PMID:23576997

  14. The search for high-redshift supernovae and the image reduction

    NASA Astrophysics Data System (ADS)

    Kim, Matthew Yongsok

    1999-11-01

    The absolute peak magnitudes of Type Ia supernovae are tightly bound and their small variation shows a strong correlation with their lightcurve widths and spectral features. This correlation can be used to calibrate Type Ia supernovae peak magnitudes, making Type Ia supernovae one of the most powerful cosmological distance indicators. The Supernova Cosmology Project has developed a new search technique for detecting Type Ia supernovae at high redshift and found more than 70 supernovae at 0.3 < z < 1.2. We have used these high-redshift Type Ia supernovae to measure the cosmological parameters, ΩM, and ΩΛ , of the standard big bang model. By analyzing the redshift-apparent brightness relationship on a sample of the first 42 supernovae at 0.3 < z < .85, we have succeeded in putting a significant constraint, on the cosmological parameters. In this paper, I will discuss our supernova detection technique and the image reduction process we have used in our project.

  15. Real-time imaging of Huntingtin aggregates diverting target search and gene transcription

    PubMed Central

    Li, Li; Liu, Hui; Dong, Peng; Li, Dong; Legant, Wesley R; Grimm, Jonathan B; Lavis, Luke D; Betzig, Eric; Tjian, Robert; Liu, Zhe

    2016-01-01

    The presumptive altered dynamics of transient molecular interactions in vivo contributing to neurodegenerative diseases have remained elusive. Here, using single-molecule localization microscopy, we show that disease-inducing Huntingtin (mHtt) protein fragments display three distinct dynamic states in living cells – 1) fast diffusion, 2) dynamic clustering and 3) stable aggregation. Large, stable aggregates of mHtt exclude chromatin and form 'sticky' decoy traps that impede target search processes of key regulators involved in neurological disorders. Functional domain mapping based on super-resolution imaging reveals an unexpected role of aromatic amino acids in promoting protein-mHtt aggregate interactions. Genome-wide expression analysis and numerical simulation experiments suggest mHtt aggregates reduce transcription factor target site sampling frequency and impair critical gene expression programs in striatal neurons. Together, our results provide insights into how mHtt dynamically forms aggregates and disrupts the finely-balanced gene control mechanisms in neuronal cells. DOI: http://dx.doi.org/10.7554/eLife.17056.001 PMID:27484239

  16. Neuron-Miner: An Advanced Tool for Morphological Search and Retrieval in Neuroscientific Image Databases.

    PubMed

    Conjeti, Sailesh; Mesbah, Sepideh; Negahdar, Mohammadreza; Rautenberg, Philipp L; Zhang, Shaoting; Navab, Nassir; Katouzian, Amin

    2016-10-01

    The steadily growing amounts of digital neuroscientific data demands for a reliable, systematic, and computationally effective retrieval algorithm. In this paper, we present Neuron-Miner, which is a tool for fast and accurate reference-based retrieval within neuron image databases. The proposed algorithm is established upon hashing (search and retrieval) technique by employing multiple unsupervised random trees, collectively called as Hashing Forests (HF). The HF are trained to parse the neuromorphological space hierarchically and preserve the inherent neuron neighborhoods while encoding with compact binary codewords. We further introduce the inverse-coding formulation within HF to effectively mitigate pairwise neuron similarity comparisons, thus allowing scalability to massive databases with little additional time overhead. The proposed hashing tool has superior approximation of the true neuromorphological neighborhood with better retrieval and ranking performance in comparison to existing generalized hashing methods. This is exhaustively validated by quantifying the results over 31266 neuron reconstructions from Neuromorpho.org dataset curated from 147 different archives. We envisage that finding and ranking similar neurons through reference-based querying via Neuron Miner would assist neuroscientists in objectively understanding the relationship between neuronal structure and function for applications in comparative anatomy or diagnosis.

  17. A nanobuffer reporter library for fine-scale imaging and perturbation of endocytic organelles

    PubMed Central

    Wang, Chensu; Wang, Yiguang; Li, Yang; Bodemann, Brian; Zhao, Tian; Ma, Xinpeng; Huang, Gang; Hu, Zeping; DeBerardinis, Ralph J.; White, Michael A.; Gao, Jinming

    2015-01-01

    Endosomes, lysosomes and related catabolic organelles are a dynamic continuum of vacuolar structures that impact a number of cell physiological processes such as protein/lipid metabolism, nutrient sensing and cell survival. Here we develop a library of ultra-pH-sensitive fluorescent nanoparticles with chemical properties that allow fine-scale, multiplexed, spatio-temporal perturbation and quantification of catabolic organelle maturation at single organelle resolution to support quantitative investigation of these processes in living cells. Deployment in cells allows quantification of the proton accumulation rate in endosomes; illumination of previously unrecognized regulatory mechanisms coupling pH transitions to endosomal coat protein exchange; discovery of distinct pH thresholds required for mTORC1 activation by free amino acids versus proteins; broad-scale characterization of the consequence of endosomal pH transitions on cellular metabolomic profiles; and functionalization of a context-specific metabolic vulnerability in lung cancer cells. Together, these biological applications indicate the robustness and adaptability of this nanotechnology-enabled ‘detection and perturbation' strategy. PMID:26437053

  18. Direct Geolocation of Satellite Images with the EO-CFI Libraries

    NASA Astrophysics Data System (ADS)

    de Miguel, Eduardo; Prado, Elena; Estebanez, Monica; Martin, Ana I.; Gonzalez, Malena

    2016-08-01

    The INTA Remote Sensing Laboratory has implemented a tool for the direct geolocation of satellite images. The core of the tool is a C code based on the "Earth Observation Mission CFI SW" from ESA. The tool accepts different types of inputs for satellite attitude (euler angles, quaternions, default attitude models). Satellite position can be provided either in ECEF or ECI coordinates. The line of sight of each individual detector is imported from an external file or is generated by the tool from camera parameters. Global DEM ACE2 is used to define ground intersection of the LOS.The tool has been already tailored for georeferencing images from the forthcoming Spanish Earth Observation mission SEOSat/Ingenio, and for the camera APIS onboard the INTA cubesat OPTOS. The next step is to configure it for the geolocation of Sentinel 2 L1b images.The tool has been internally validated by different means. This validation shows that the tool is suitable for georeferencing images from high spatial resolution missions. As part of the validation efforts, a code for simulating orbital info for LEO missions using EO-CFI has been produced.

  19. Creating Library Spaces: Libraries 2040.

    ERIC Educational Resources Information Center

    Bruijnzeels, Rob

    This paper suggests that by 2004, the traditional public libraries will have ceased to exist and new, attractive future libraries will have taken their place. The Libraries 2040 project of the Netherlands is initiating seven different libraries of the future. The Brabant library is the "ultimate library of the future" for the Dutch…

  20. Adaptive multi-objective archive-based hybrid scatter search for segmentation in lung computed tomography imaging

    NASA Astrophysics Data System (ADS)

    Bong, Chin Wei; Yoong Lam, Hong; Tajudin Khader, Ahamad; Kamarulzaman, Hamzah

    2012-03-01

    This article proposes a multi-objective clustering ensemble method for medical image segmentation. The proposed method is called adaptive multi-objective archive-based hybrid scatter search (AMAHSS). It utilizes fuzzy clustering with optimization of three fitness functions: global fuzzy compactness of the clusters, fuzzy separation and symmetry distance-based cluster validity index. The AMAHSS enables the search strategy to explore intensively the search space with high-quality solutions and to move to unexplored search space when necessary. The best single solution is processed using the metaclustering algorithm. The proposed framework is designed to segment lung computed tomography images for candidate nodule detection. This candidate nodule will then be classified as cancerous or non-cancerous. The authors validate the method with standard k-means, fuzzy c-means and the multi-objective genetic algorithm with different postprocessing methods for the final solution. The results obtained from the benchmark experiment indicate that the method achieves up to 90% of the positive predictive rate.

  1. Pre-Service Teachers' Use of Library Databases: Some Insights

    ERIC Educational Resources Information Center

    Lamb, Janeen; Howard, Sarah; Easey, Michael

    2014-01-01

    The aim of this study is to investigate if providing mathematics education pre-service teachers with animated library tutorials on library and database searches changes their searching practices. This study involved the completion of a survey by 138 students and seven individual interviews before and after library search demonstration videos were…

  2. Assessing the fundamental limits of multiple star formation: An imaging search for the lowest mass stellar companions to intermediate-mass stars

    NASA Astrophysics Data System (ADS)

    Duchene, Gaspard; Tzern Oon, Jner; Kantorski, Patrick; De Rosa, Robert J.; Thomas, Sandrine; Patience, Jennifer; Pueyo, Laurent; Nielsen, Eric L.; Konopacky, Quinn M.

    2017-01-01

    Stellar binaries are a common byproduct of star formation and therefore inform us on the processes of collapse and fragmentation of prestellar cores. While multiplicity surveys generally reveal an extensive diversity of multiple systems, with broad ranges of semi-major axis, mass ratio and eccentricities, one remarkable feature that was identified in the last two decades is the so-called brown dwarf desert, i.e., the apparent paucity of (non-planetary) substellar companions to solar-type stars. This "desert" was primarily identified among spectroscopic binaries but also appears to be a significant feature of wider, visual binaries. The physical origin of this feature has not been fully accounted for but is likely established during the formation of the systems. One way to shed new light on this question is to study the frequency of low-mass stellar companions to intermediate-mass star (late-B type, or 3-5 Msun), as those form through a similar, albeit scaled-up, mechanism as solar-type stars. Here we present preliminary results from two adaptive-optics based surveys to search for such multiple systems. Specifically, we are using the new ShaneAO system on the Lick3m telescope (~100 stars observed to date) and the Gemini Planet Imager (45 stars observed). We are targeting stars located both in open clusters and scattered in the Galactic field to search for potential evidence of dynamic evolution. To identify candidate low-mass companions as close in to target stars, we use advanced point spread function (PSF) subtraction algorithms, specifically implementations of the LOCI and KLIP algorithms. In the case of the ShaneAO observations, which do not allow for field rotation, we use LOCI in combination with Reference Differential Imaging (ADI), using our library of science images as input for PSF subtraction. In this contribution, we will discuss the potential of ShaneAO to reveal faint, subarcsecond companions in this context and present candidate companions from both

  3. A direct imaging search for close stellar and sub-stellar companions to young nearby stars

    NASA Astrophysics Data System (ADS)

    Vogt, N.; Mugrauer, M.; Neuhäuser, R.; Schmidt, T. O. B.; Contreras-Quijada, A.; Schmidt, J. G.

    2015-01-01

    A total of 28 young nearby stars (ages {≤ 60} Myr) have been observed in the K_s-band with the adaptive optics imager Naos-Conica of the Very Large Telescope at the Paranal Observatory in Chile. Among the targets are ten visual binaries and one triple system at distances between 10 and 130 pc, all previously known. During a first observing epoch a total of 20 faint stellar or sub-stellar companion-candidates were detected around seven of the targets. These fields, as well as most of the stellar binaries, were re-observed with the same instrument during a second epoch, about one year later. We present the astrometric observations of all binaries. Their analysis revealed that all stellar binaries are co-moving. In two cases (HD 119022 AB and FG Aqr B/C) indications for significant orbital motions were found. However, all sub-stellar companion candidates turned out to be non-moving background objects except PZ Tel which is part of this project but whose results were published elsewhere. Detection limits were determined for all targets, and limiting masses were derived adopting three different age values; they turn out to be less than 10 Jupiter masses in most cases, well below the brown dwarf mass range. The fraction of stellar multiplicity and of the sub-stellar companion occurrence in the star forming regions in Chamaeleon are compared to the statistics of our search, and possible reasons for the observed differences are discussed. Based on observations made with ESO telescopes at Paranal Observatory under programme IDs 083.C-0150(B), 084.C-0364(A), 084.C-0364(B), 084.C-0364(C), 086.C-0600(A) and 086.C-0600(B).

  4. A generative model for OCT retinal layer segmentation by integrating graph-based multi-surface searching and image registration.

    PubMed

    Zheng, Yuanjie; Xiao, Rui; Wang, Yan; Gee, James C

    2013-01-01

    We proposed a generative probabilistic modeling framework for automated segmentation of retinal layers from Optical Coherence Tomography (OCT) data. The objective is to learn a segmentation protocol from a collection of training images that have been manually labeled. Our model results in a novel OCT retinal layer segmentation approach which integrates algorithms of simultaneous searching of multiple interacting layer interfaces, image registration and machine learning. Different from previous work, our approach combines the benefits of constraining spatial layout of retinal layers, using a set of more robust local image descriptors, employing a mechanism for learning from manual labels and incorporating the inter-subject anatomical similarities of retina. With a set of OCT volumetric images from mutant canine retinas, we experimentally validated that our approach outperforms two state-of-the-art techniques.

  5. Understanding Internet Searching Performance in a Heterogeneous Portal for K-12 Students: Search Success, Search Time, Strategy, and Effort

    ERIC Educational Resources Information Center

    Zhang, Yin; Robins, David; Holmes, Jason; Salaba, Athena

    2009-01-01

    This study sought to better understand search performance using an online portal containing a collection of heterogeneous library resources for K-12 students. Search performance is examined in terms of search success, search time, strategy, and effort. This study revealed unsuccessful searches tended to take longer than successful searches;…

  6. Closing the loop in cortically-coupled computer vision: a brain-computer interface for searching image databases.

    PubMed

    Pohlmeyer, Eric A; Wang, Jun; Jangraw, David C; Lou, Bin; Chang, Shih-Fu; Sajda, Paul

    2011-06-01

    We describe a closed-loop brain-computer interface that re-ranks an image database by iterating between user generated 'interest' scores and computer vision generated visual similarity measures. The interest scores are based on decoding the electroencephalographic (EEG) correlates of target detection, attentional shifts and self-monitoring processes, which result from the user paying attention to target images interspersed in rapid serial visual presentation (RSVP) sequences. The highest scored images are passed to a semi-supervised computer vision system that reorganizes the image database accordingly, using a graph-based representation that captures visual similarity between images. The system can either query the user for more information, by adaptively resampling the database to create additional RSVP sequences, or it can converge to a 'done' state. The done state includes a final ranking of the image database and also a 'guess' of the user's chosen category of interest. We find that the closed-loop system's re-rankings can substantially expedite database searches for target image categories chosen by the subjects. Furthermore, better reorganizations are achieved than by relying on EEG interest rankings alone, or if the system were simply run in an open loop format without adaptive resampling.

  7. Children's Search Engines from an Information Search Process Perspective.

    ERIC Educational Resources Information Center

    Broch, Elana

    2000-01-01

    Describes cognitive and affective characteristics of children and teenagers that may affect their Web searching behavior. Reviews literature on children's searching in online public access catalogs (OPACs) and using digital libraries. Profiles two Web search engines. Discusses some of the difficulties children have searching the Web, in the…

  8. Robust coastal region detection method using image segmentation and sensor LOS information for infrared search and track

    NASA Astrophysics Data System (ADS)

    Kim, Sungho; Sun, Sun-Gu; Kwon, Soon; Kim, Kyung-Tae

    2013-05-01

    This paper presents a novel coastal region detection method for infrared search and track. The coastal region detection is critical to home land security and ship defense. Detected coastal region information can be used to the design of target detector such as moving target detection and threshold setting. We can detect coastal regions robustly by combining the infrared image segmentation and sensor line-of-sight (LOS) information. The K-means-based image segmentation can provide initial region information and the sensor LOS information can predict the approximate horizon location in images. The evidence of coastal region is confirmed by contour extraction results. The experimental results on remote coasts and near coasts validate the robustness of the proposed coastal region detector.

  9. A high-resolution CMOS imaging detector for the search of neutrinoless double β decay in 82Se

    NASA Astrophysics Data System (ADS)

    Chavarria, A. E.; Galbiati, C.; Li, X.; Rowlands, J. A.

    2017-03-01

    We introduce high-resolution solid-state imaging detectors for the search of neutrinoless double β decay. Based on the present literature, imaging devices from amorphous 82Se evaporated on a complementary metal-oxide-semiconductor (CMOS) active pixel array could have the energy and spatial resolution to produce two-dimensional images of ionizing tracks of utmost quality, effectively akin to an electronic bubble chamber in the double β decay energy regime. Still to be experimentally demonstrated, a detector consisting of a large array of these devices could have very low backgrounds, possibly reaching 1 × 10‑7/(kgy) in the neutrinoless decay region of interest (ROI), as it may be required for the full exploration of the neutrinoless double β decay parameter space in the most unfavorable condition of a strongly quenched nucleon axial coupling constant.

  10. A library of Lick Observatory Image Dissector Scanner indices for binary stellar populations

    NASA Astrophysics Data System (ADS)

    Zhang, Fenghui; Li, Lifang

    2006-08-01

    Using evolutionary population synthesis, we present 13 refined absorption-line indices defined by the Lick Observatory Image Dissector Scanner (Lick/IDS) system for an extensive set of instantaneous-burst binary stellar populations (BSPs) at high resolution (~0.3 Å), and 38 indices at intermediate resolution (3 Å). The ages of the populations are at an interval of 1Gyr in the range 1-15Gyr, and the metallicities are in the range 0.004-0.03. These indices are obtained by two methods: (i) using the empirical fitting functions (FFs method); (ii) measured directly from the synthetic spectra (DC method). Together with our previous paper, a data base of Lick/IDS spectral absorption-line indices for BSPs at high and intermediate resolutions is provided. This set of indices includes 21 indices of Worthey et al., four Balmer indices defined by Worthey & Ottaviani, and 13 indices with the new passband definitions of Trager et al. The full set of synthetic indices and the integrated pseudo-continuum are listed in the Appendices, which are only available online at http://www.blackwell-synergy.com/ or from our website (http://www.ast9.com/), or on request from the first author. Moreover, the full set of the integrated spectral energy distributions can be obtained from our website. We compare the synthetic Lick/IDS indices obtained by the FFs method and those by the DC method for BSPs with various metallicities, and find that the discrepancies are significant: Ca4455 (index 6), Fe4668 (8), Mgb (13), Fe5709 (17), NaD (19), TiO1 (20) and TiO2 (21, except for Z = 0.02) in the W94 system, Ca4455T (6T), C24668T (8T), NaDT (19T), TiOT1 (20T) and TiOT2 (21T, except for Z = 0.02) in the T98 system obtained by the DC method are less (bluer) than the corresponding ones obtained by the FFs method for all metallicities. Ca4227 (index 3), Fe5782 (18), Ca4227T (3T) and Fe5782T (18T) are greater at Z = 0.03 and become bluer at Z = 0.004; the Fe5709T (17T) index is less at Z = 0.03 and

  11. The library as a reference tool: online catalogs

    USGS Publications Warehouse

    Stark, M.

    1991-01-01

    Online catalogs are computerized listings of materials in a particular library or group of libraries. General characteristics of online catalogs include ability for searching interactively and for locating descriptions of books, maps, and reports on regional or topical geology. Suggestions for searching, evaluating results, modifying searches, and limitations of searching are presented. -Author

  12. Improving performance of content-based image retrieval schemes in searching for similar breast mass regions: an assessment.

    PubMed

    Wang, Xiao-Hui; Park, Sang Cheol; Zheng, Bin

    2009-02-21

    This study aims to assess three methods commonly used in content-based image retrieval (CBIR) schemes and investigate the approaches to improve scheme performance. A reference database involving 3000 regions of interest (ROIs) was established. Among them, 400 ROIs were randomly selected to form a testing dataset. Three methods, namely mutual information, Pearson's correlation and a multi-feature-based k-nearest neighbor (KNN) algorithm, were applied to search for the 15 'the most similar' reference ROIs to each testing ROI. The clinical relevance and visual similarity of searching results were evaluated using the areas under receiver operating characteristic (ROC) curves (A(Z)) and average mean square difference (MSD) of the mass boundary spiculation level ratings between testing and selected ROIs, respectively. The results showed that the A(Z) values were 0.893 +/- 0.009, 0.606 +/- 0.021 and 0.699 +/- 0.026 for the use of KNN, mutual information and Pearson's correlation, respectively. The A(Z) values increased to 0.724 +/- 0.017 and 0.787 +/- 0.016 for mutual information and Pearson's correlation when using ROIs with the size adaptively adjusted based on actual mass size. The corresponding MSD values were 2.107 +/- 0.718, 2.301 +/- 0.733 and 2.298 +/- 0.743. The study demonstrates that due to the diversity of medical images, CBIR schemes using multiple image features and mass size-based ROIs can achieve significantly improved performance.

  13. Large Spectral Library Problem

    SciTech Connect

    Chilton, Lawrence K.; Walsh, Stephen J.

    2008-10-03

    Hyperspectral imaging produces a spectrum or vector at each image pixel. These spectra can be used to identify materials present in the image. In some cases, spectral libraries representing atmospheric chemicals or ground materials are available. The challenge is to determine if any of the library chemicals or materials exist in the hyperspectral image. The number of spectra in these libraries can be very large, far exceeding the number of spectral channels collected in the ¯eld. Suppose an image pixel contains a mixture of p spectra from the library. Is it possible to uniquely identify these p spectra? We address this question in this paper and refer to it as the Large Spectral Library (LSL) problem. We show how to determine if unique identi¯cation is possible for any given library. We also show that if p is small compared to the number of spectral channels, it is very likely that unique identi¯cation is possible. We show that unique identi¯cation becomes less likely as p increases.

  14. Automating Small Libraries.

    ERIC Educational Resources Information Center

    Swan, James

    1996-01-01

    Presents a four-phase plan for small libraries strategizing for automation: inventory and weeding, data conversion, implementation, and enhancements. Other topics include selecting a system, MARC records, compatibility, ease of use, industry standards, searching capabilities, support services, system security, screen displays, circulation modules,…

  15. Excellence in Library Management.

    ERIC Educational Resources Information Center

    Naulty, Deborah

    By emulating traits of high-performing corporations such as those described in the book "In Search of Excellence," the library/information profession can also reach the goal of excellence. Attributes characterizing excellent companies include exhibiting a bias for action; maintaining quality service through closeness to the customer;…

  16. Facilitating medical information search using Google Glass connected to a content-based medical image retrieval system.

    PubMed

    Widmer, Antoine; Schaer, Roger; Markonis, Dimitrios; Muller, Henning

    2014-01-01

    Wearable computing devices are starting to change the way users interact with computers and the Internet. Among them, Google Glass includes a small screen located in front of the right eye, a camera filming in front of the user and a small computing unit. Google Glass has the advantage to provide online services while allowing the user to perform tasks with his/her hands. These augmented glasses uncover many useful applications, also in the medical domain. For example, Google Glass can easily provide video conference between medical doctors to discuss a live case. Using these glasses can also facilitate medical information search by allowing the access of a large amount of annotated medical cases during a consultation in a non-disruptive fashion for medical staff. In this paper, we developed a Google Glass application able to take a photo and send it to a medical image retrieval system along with keywords in order to retrieve similar cases. As a preliminary assessment of the usability of the application, we tested the application under three conditions (images of the skin; printed CT scans and MRI images; and CT and MRI images acquired directly from an LCD screen) to explore whether using Google Glass affects the accuracy of the results returned by the medical image retrieval system. The preliminary results show that despite minor problems due to the relative stability of the Google Glass, images can be sent to and processed by the medical image retrieval system and similar images are returned to the user, potentially helping in the decision making process.

  17. Content-based image retrieval for brain MRI: an image-searching engine and population-based analysis to utilize past clinical data for future diagnosis.

    PubMed

    Faria, Andreia V; Oishi, Kenichi; Yoshida, Shoko; Hillis, Argye; Miller, Michael I; Mori, Susumu

    2015-01-01

    Radiological diagnosis is based on subjective judgment by radiologists. The reasoning behind this process is difficult to document and share, which is a major obstacle in adopting evidence-based medicine in radiology. We report our attempt to use a comprehensive brain parcellation tool to systematically capture image features and use them to record, search, and evaluate anatomical phenotypes. Anatomical images (T1-weighted MRI) were converted to a standardized index by using a high-dimensional image transformation method followed by atlas-based parcellation of the entire brain. We investigated how the indexed anatomical data captured the anatomical features of healthy controls and a population with Primary Progressive Aphasia (PPA). PPA was chosen because patients have apparent atrophy at different degrees and locations, thus the automated quantitative results can be compared with trained clinicians' qualitative evaluations. We explored and tested the power of individual classifications and of performing a search for images with similar anatomical features in a database using partial least squares-discriminant analysis (PLS-DA) and principal component analysis (PCA). The agreement between the automated z-score and the averaged visual scores for atrophy (r = 0.8) was virtually the same as the inter-evaluator agreement. The PCA plot distribution correlated with the anatomical phenotypes and the PLS-DA resulted in a model with an accuracy of 88% for distinguishing PPA variants. The quantitative indices captured the main anatomical features. The indexing of image data has a potential to be an effective, comprehensive, and easily translatable tool for clinical practice, providing new opportunities to mine clinical databases for medical decision support.

  18. Library 2000.

    ERIC Educational Resources Information Center

    Drake, Miriam A.

    In fall 1984, the Georgia Institute of Technology administration and library staff began planning for Library 2000, a project aimed at creating a showcase library to demonstrate the application of the latest information technology in an academic and research environment. The purposes of Library 2000 include: increasing awareness of students,…

  19. Library Computing.

    ERIC Educational Resources Information Center

    Dayall, Susan A.; And Others

    1987-01-01

    Six articles on computers in libraries discuss training librarians and staff to use new software; appropriate technology; system upgrades of the Research Libraries Group's information system; pre-IBM PC microcomputers; multiuser systems for small to medium-sized libraries; and a library user's view of the traditional card catalog. (EM)

  20. Library Buildings.

    ERIC Educational Resources Information Center

    Manley, Will; And Others

    1989-01-01

    The innovative designs of three libraries are described: the Tempe (Arizona) Public Library, which emphasizes services for children and students; an underground library at Park College, Missouri; and a public library located in the Vancouver (Washington) Mall. The fourth article describes the work going on to restore the Los Angeles (California)…

  1. DEA Multimedia Drug Library: Marijuana

    MedlinePlus

    ... DEA Press Room » Multi-Media Library » Image Gallery » Marijuana MARIJUANA To Save Images: First click on the thumbnail ... Save in directory and then click Save. Indoor Marijuana Grow Indoor Marijuana Grow Loose Marijuana Marinol 10mg ...

  2. The Use of Social Tags in Text and Image Searching on the Web

    ERIC Educational Resources Information Center

    Kim, Yong-Mi

    2011-01-01

    In recent years, tags have become a standard feature on a diverse range of sites on the Web, accompanying blog posts, photos, videos, and online news stories. Tags are descriptive terms attached to Internet resources. Despite the rapid adoption of tagging, how people use tags during the search process is not well understood. There is little…

  3. Quality evaluation of tandem mass spectral libraries.

    PubMed

    Oberacher, Herbert; Weinmann, Wolfgang; Dresen, Sebastian

    2011-06-01

    Tandem mass spectral libraries are gaining more and more importance for the identification of unknowns in different fields of research, including metabolomics, forensics, toxicology, and environmental analysis. Particularly, the recent invention of reliable, robust, and transferable libraries has increased the general acceptance of these tools. Herein, we report on results obtained from thorough evaluation of the match reliabilities of two tandem mass spectral libraries: the MSforID library established by the Oberacher group in Innsbruck and the Weinmann library established by the Weinmann group in Freiburg. Three different experiments were performed: (1) Spectra of the libraries were searched against their corresponding library after excluding either this single compound-specific spectrum or all compound-specific spectra prior to searching; (2) the libraries were searched against each other using either library as reference set or sample set; (3) spectra acquired on different mass spectrometric instruments were matched to both libraries. Almost 13,000 tandem mass spectra were included in this study. The MSforID search algorithm was used for spectral matching. Statistical evaluation of the library search results revealed that principally both libraries enable the sensitive and specific identification of compounds. Due to higher mass accuracy of the QqTOF compared with the QTrap instrument, matches to the MSforID library were more reliable when comparing spectra with both libraries. Furthermore, only the MSforID library was shown to be efficiently transferable to different kinds of tandem mass spectrometers, including "tandem-in-time" instruments; this is due to the coverage of a large range of different collision energy settings-including the very low range-which is an outstanding characteristics of the MSforID library.

  4. Libraries and the Search for Academic Excellence. Proceedings of the Arden House Symposium (New York, New York, March 15-17, 1987).

    ERIC Educational Resources Information Center

    1987

    In the introductory paper Patricia Senn Breivik provides background information on and an overview of a national symposium. This introduction is followed by the full text of nine papers presented at the symposium: (1) "The Academic Library and Education for Leadership" (Major R. Owens, U.S. House of Representatives); (2) "Academic…

  5. Mold Image Library

    MedlinePlus

    ... on walls When built, the roof had a hole for the drainpipe; however, a drainpipe was not ... deposits resulting from rain pouring through the drain hole onto the walls. Photo courtesy of Terry Brennan ...

  6. A filmless radiology teaching conference system for pertinent displaying and image searching.

    PubMed

    Abe, Katsumi; Narata, Mitsuhiro; Tanaka, Ikue; Takahashi, Motoichiro; Igarashi, Akihito; Sasaki, Takahiro; Matsuyama, Kazuya; Tohi, Naokaz; Kosuda, Shigeru

    2009-12-01

    To solve the problems of image displays in filmless radiology conferences for the purpose of teaching, we made an experimental design of a conference system with dual 50-in. plasma monitors for displaying larger images and a shared folder containing shortcuts to images for quick display during conferences on the desktop of each client computer in a picture archival and communication system. The image quality of the monitors was evaluated using the TG18-QC test pattern. The display time of images was measured in 20 cases when the shared folder was used and when it was not. Monitor screen size and image quality, operability, display time of images, and overall impression given by the system were evaluated subjectively by five radiologists. Although the image quality of the monitor was not as high as that of the high-resolution monitors used for diagnostic radiology, its performance was good enough for teaching. The average display time using the shared folder (2.6 +/- 0.39 s) was significantly shorter than without it (16.9 +/- 5.04 s; p = 2.85 x 10(-6)). Despite the need for certain improvements in monitor size and in the operability of the system, the radiologists considered the system suitable for radiology teaching conferences. We believe that this system is useful for institutions that intend to introduce a filmless system for filmless radiology teaching conferences.

  7. BIRP: Software for interactive search and retrieval of image engineering data

    NASA Technical Reports Server (NTRS)

    Arvidson, R. E.; Bolef, L. K.; Guinness, E. A.; Norberg, P.

    1980-01-01

    Better Image Retrieval Programs (BIRP), a set of programs to interactively sort through and to display a database, such as engineering data for images acquired by spacecraft is described. An overview of the philosophy of BIRP design, the structure of BIRP data files, and examples that illustrate the capabilities of the software are provided.

  8. Using Quick Search.

    ERIC Educational Resources Information Center

    Maxfield, Sandy, Ed.; Kabus, Karl, Ed.

    This document is a guide to the use of Quick Search, a library service that provides access to more than 100 databases which contain references to journal articles and other research materials through two commercial systems--BRS After/Dark and DIALOG's Knowledge Index. The guide is divided into five sections: (1) Using Quick Search; (2) The…

  9. The Hybrid Feature Selection Algorithm Based on Maximum Minimum Backward Selection Search Strategy for Liver Tissue Pathological Image Classification

    PubMed Central

    2016-01-01

    We propose a novel feature selection algorithm for liver tissue pathological image classification. To improve the efficiency of feature selection, the same feature values of positive and negative samples are removed in rough selection. To obtain the optimal feature subset, a new heuristic search algorithm, which is called Maximum Minimum Backward Selection (MMBS), is proposed in precise selection. MMBS search strategy has the following advantages. (1) For the deficiency of Discernibility of Feature Subsets (DFS) evaluation criteria, which makes the class of small samples invalid for unbalanced samples, the Weighted Discernibility of Feature Subsets (WDFS) evaluation criteria are proposed as the evaluation strategy of MMBS, which is also available for unbalanced samples. (2) For the deficiency of Sequential Forward Selection (SFS) and Sequential Backward Selection (SBS), which can only add or only delete feature, MMBS decides whether to add the feature to feature subset according to WDFS criteria for each feature firstly; then it decides whether to remove the feature from feature subset according to SBS algorithm. In this way, the better feature subset can be obtained. The experiment results show that the proposed hybrid feature selection algorithm has good classification performance for liver tissue pathological image. PMID:27563344

  10. The Hybrid Feature Selection Algorithm Based on Maximum Minimum Backward Selection Search Strategy for Liver Tissue Pathological Image Classification.

    PubMed

    Liu, Huiling; Jiang, Huiyan; Zheng, Ruiping

    2016-01-01

    We propose a novel feature selection algorithm for liver tissue pathological image classification. To improve the efficiency of feature selection, the same feature values of positive and negative samples are removed in rough selection. To obtain the optimal feature subset, a new heuristic search algorithm, which is called Maximum Minimum Backward Selection (MMBS), is proposed in precise selection. MMBS search strategy has the following advantages. (1) For the deficiency of Discernibility of Feature Subsets (DFS) evaluation criteria, which makes the class of small samples invalid for unbalanced samples, the Weighted Discernibility of Feature Subsets (WDFS) evaluation criteria are proposed as the evaluation strategy of MMBS, which is also available for unbalanced samples. (2) For the deficiency of Sequential Forward Selection (SFS) and Sequential Backward Selection (SBS), which can only add or only delete feature, MMBS decides whether to add the feature to feature subset according to WDFS criteria for each feature firstly; then it decides whether to remove the feature from feature subset according to SBS algorithm. In this way, the better feature subset can be obtained. The experiment results show that the proposed hybrid feature selection algorithm has good classification performance for liver tissue pathological image.

  11. Evaluation of Diffusion-Tensor Imaging-Based Global Search and Tractography for Tumor Surgery Close to the Language System

    PubMed Central

    Richter, Mirco; Zolal, Amir; Ganslandt, Oliver; Buchfelder, Michael; Nimsky, Christopher; Merhof, Dorit

    2013-01-01

    Pre-operative planning and intra-operative guidance in neurosurgery require detailed information about the location of functional areas and their anatomo-functional connectivity. In particular, regarding the language system, post-operative deficits such as aphasia can be avoided. By combining functional magnetic resonance imaging and diffusion tensor imaging, the connectivity between functional areas can be reconstructed by tractography techniques that need to cope with limitations such as limited resolution and low anisotropic diffusion close to functional areas. Tumors pose particular challenges because of edema, displacement effects on brain tissue and infiltration of white matter. Under these conditions, standard fiber tracking methods reconstruct pathways of insufficient quality. Therefore, robust global or probabilistic approaches are required. In this study, two commonly used standard fiber tracking algorithms, streamline propagation and tensor deflection, were compared with a previously published global search, Gibbs tracking and a connection-oriented probabilistic tractography approach. All methods were applied to reconstruct neuronal pathways of the language system of patients undergoing brain tumor surgery, and control subjects. Connections between Broca and Wernicke areas via the arcuate fasciculus (AF) and the inferior fronto-occipital fasciculus (IFOF) were validated by a clinical expert to ensure anatomical feasibility, and compared using distance- and diffusion-based similarity metrics to evaluate their agreement on pathway locations. For both patients and controls, a strong agreement between all methods was observed regarding the location of the AF. In case of the IFOF however, standard fiber tracking and Gibbs tracking predominantly identified the inferior longitudinal fasciculus that plays a secondary role in semantic language processing. In contrast, global search resolved connections in almost every case via the IFOF which could be confirmed by

  12. A Novel Passive Millimeter Imager for Broad-Area Search - Final Report on Project PL09-NPMI-PD07 (PNNL-55180)

    SciTech Connect

    Tedeschi, Jonathan R.; Bernacki, Bruce E.; Kelly, James F.; Sheen, David M.; Harris, Robert V.; Hall, Thomas E.; Hatchell, Brian K.; Knopik, Clint D.; Lechelt, Wayne M.; McMakin, Douglas L.; Mendoza, Albert; Severtsen, Ronald H.; Valdez, Patrick LJ

    2011-12-31

    This report describes research and development efforts toward a novel passive millimeter-wave (mm-wave) electromagnetic imaging device for broad-area search. It addresses the technical challenge of detecting anomalies that occupy a small fraction of a pixel. The purpose of the imager is to pinpoint suspicious locations for cuing subsequent higher-resolution imaging. The technical basis for the approach is to exploit thermal and polarization anomalies that distinguish man-made features from natural features.

  13. Basic Research in Atkins Library. A Research Guide and Workbook.

    ERIC Educational Resources Information Center

    Van Noate, Judith

    This workbook is designed to help students at the University of North Carolina-Charlotte acquire basic research skills in using a university library. The workbook is divided into 10 sections: (1) Finding Books in Atkins Library; (2) Library of Congress Subject Headings; (3) Searching ALADDIN (the online catalog); (4) Searching a Subject; (5) Call…

  14. Search without Boundaries Using Simple APIs

    USGS Publications Warehouse

    Tong, Qi

    2009-01-01

    The U.S. Geological Survey (USGS) Library, where the author serves as the digital services librarian, is increasingly challenged to make it easier for users to find information from many heterogeneous information sources. Information is scattered throughout different software applications (i.e., library catalog, federated search engine, link resolver, and vendor websites), and each specializes in one thing. How could the library integrate the functionalities of one application with another and provide a single point of entry for users to search across? To improve the user experience, the library launched an effort to integrate the federated search engine into the library's intranet website. The result is a simple search box that leverages the federated search engine's built-in application programming interfaces (APIs). In this article, the author describes how this project demonstrated the power of APIs and their potential to be used by other enterprise search portals inside or outside of the library.

  15. Examining Search Functions of EAD Finding Aids Web Sites

    ERIC Educational Resources Information Center

    Zhou, Xiaomu

    2006-01-01

    This article examined the search functions for all individual EAD Web sites listed on the Library of Congress Web site in 2003. In particular, the type of search engine, search modes, options for searching, search results display, search feedback, and other features of the search systems were studied. The data analysis suggests that there have…

  16. Special Libraries

    ERIC Educational Resources Information Center

    Lavendel, Giuliana

    1977-01-01

    Discusses problems involved in maintaining special scientific or engineering libraries, including budget problems, remote storage locations, rental computer retrieval systems, protecting trade secrets, and establishing a magnetic tape library. (MLH)

  17. Use of ERTS-1 images in the search for porphyry copper deposits in Pakistani Baluchistan

    NASA Technical Reports Server (NTRS)

    Schmidt, R. G.

    1973-01-01

    Geomorphic features related to a known porphyry copper deposit at Saindak, western Chagai District, Pakistan, are easily distinguished on ERTS-1 images. New geologic information from the images was used in conjunction with known geology to evaluate one previously known prospect area and to suggest two additional ones, but no new prospects were recognized on the basis of the images alone. The study also showed that Saindak-type deposits are not likely to be present in some extensive areas of the Chagai District. The Saindak deposit is in an area of relatively easily eroded folded sedimentary and volcanic rocks. The deposit is characterized by an elongate zone of easily eroded sulfide-rich rock surrounded by this rim and the central sulfide-rich valley are conspicuous features on the images. Swarms of dikes are probably useful for distinguishing real rims from other resistant rock types, but there is no expression of them on the image, although they are easily seen on aerial photographs of the Saindak rim.

  18. Health sciences library building projects, 1998 survey.

    PubMed Central

    Bowden, V M

    1999-01-01

    Twenty-eight health sciences library building projects are briefly described, including twelve new buildings and sixteen additions, remodelings, and renovations. The libraries range in size from 2,144 square feet to 190,000 gross square feet. Twelve libraries are described in detail. These include three hospital libraries, one information center sponsored by ten institutions, and eight academic health sciences libraries. Images PMID:10550027

  19. High-throughput search for photoabsorbers for solar fuels

    NASA Astrophysics Data System (ADS)

    Mitrovic, Slobodan; Cornell, Earl; Newhouse, Paul; Haber, Joel; Jones, Ryan; Gregoire, John

    2015-03-01

    We present the suite of instrumentation developed specifically to search for light absorber materials for solar hydrogen and carbon-based fuels. A pre-screening method utilizes colorimetric image analysis to search for positive and negative metrics for electronic bandgaps, isolate materials not suitable for further screening and identify phase clusters in the compositional space of combinatorial material libraries. Then, two highly-automatized instruments screen for photocurrent, by performing incident-photon conversion efficiency measurement in a redox couple, and absorption properties via UV-Vis-NIR spectroscopy. Finally, we present a new instrument for multispectral microscopic imaging of material libraries. We will discuss the challenges in automated data analysis from large datasets and multispectral data-cubes. This material is based upon work performed by the Joint Center for Artificial Photosynthesis, a DOE Energy Innovation Hub, supported through the Office of Science of the U.S. Department of Energy under Award Number DE-SC000499.

  20. Semi-supervised Multi-view Discrete Hashing for Fast Image Search.

    PubMed

    Zhang, Chenghao; Zheng, Wei-Shi

    2017-02-24

    Hashing is an important method for fast neighbor search on large scale dataset in Hamming space. While most research on hash models are focusing on single-view data, recently the multi-view approaches with a majority of unsupervised multiview hash models have been considered. Despite of existence of millions of unlabeled data samples, it is believed that labeling a handful of data will remarkably improve the searching performance. In this work, we propose a semi-supervised multi-view hash model. Besides incorporating a portion of label information into the model, the proposed multi-view model differs from existing multi-view hash models in three-fold: 1) a composite discrete hash learning modeling that is able to minimize the loss jointly on multi-view features when using relaxation on learning hashing codes, 2) exploring statistically uncorrelated multi-view features for generating hash codes, and 3) a composite locality preserving modeling for locally compact coding. Extensive experiments have been conducted to show the effectiveness of the proposed semi-supervised multi-view hash model as compared to related multi-view hash models and semi-supervised hash models.

  1. Efficient Solutions for Time-Consuming Jobs in the Library

    ERIC Educational Resources Information Center

    Bailey, Kieren

    2011-01-01

    Two of the most time-consuming jobs in the library are taking inventory and keeping track of in-house uses of library material. Librarians have long been searching for more efficient solution for these two activities. New technology can be the answer to creating efficiency for libraries. In fact, if one is a SirsiDynix library, there is an easy…

  2. Accessing Digital Libraries: A Study of ARL Members' Digital Projects

    ERIC Educational Resources Information Center

    Kahl, Chad M.; Williams, Sarah C.

    2006-01-01

    To ensure efficient access to and integrated searching capabilities for their institution's new digital library projects, the authors studied Web sites of the Association of Research Libraries' (ARL) 111 academic, English-language libraries. Data were gathered on 1117 digital projects, noting library Web site and project access, metadata, and…

  3. Library Skills.

    ERIC Educational Resources Information Center

    Paul, Karin; Kuhlthau, Carol C.; Branch, Jennifer L.; Solowan, Diane Galloway; Case, Roland; Abilock, Debbie; Eisenberg, Michael B.; Koechlin, Carol; Zwaan, Sandi; Hughes, Sandra; Low, Ann; Litch, Margaret; Lowry, Cindy; Irvine, Linda; Stimson, Margaret; Schlarb, Irene; Wilson, Janet; Warriner, Emily; Parsons, Les; Luongo-Orlando, Katherine; Hamilton, Donald

    2003-01-01

    Includes 19 articles that address issues related to library skills and Canadian school libraries. Topics include information literacy; inquiry learning; critical thinking and electronic research; collaborative inquiry; information skills and the Big 6 approach to problem solving; student use of online databases; library skills; Internet accuracy;…

  4. Manual of General Searching Procedures.

    ERIC Educational Resources Information Center

    Cornell Univ., Ithaca, NY. Univ. Libraries

    A training and reference tool for searchers in the Preorder Section of Cornell's Olin Library Acquisitions Department, this manual establishes the rationale for searching operations and includes illustrations as well as detailed explanations of searching procedures and problems. The information given applies only to the searching of monographs,…

  5. (Meta)Search like Google

    ERIC Educational Resources Information Center

    Rochkind, Jonathan

    2007-01-01

    The ability to search and receive results in more than one database through a single interface--or metasearch--is something many users want. Google Scholar--the search engine of specifically scholarly content--and library metasearch products like Ex Libris's MetaLib, Serials Solution's Central Search, WebFeat, and products based on MuseGlobal used…

  6. Search Engines for Tomorrow's Scholars

    ERIC Educational Resources Information Center

    Fagan, Jody Condit

    2011-01-01

    Today's scholars face an outstanding array of choices when choosing search tools: Google Scholar, discipline-specific abstracts and index databases, library discovery tools, and more recently, Microsoft's re-launch of their academic search tool, now dubbed Microsoft Academic Search. What are these tools' strengths for the emerging needs of…

  7. BLISS: Basic Library Information Sources and Strategies: A Handbook for Library 101. Revised.

    ERIC Educational Resources Information Center

    Adalian, Paul T., Jr., Comp.; Rockman, Ilene F., Comp.

    This manual in library skills is designed to acquaint college students with the resources, services, and facilities of the California Polytechnic Library and library search strategies. The readings in the handbook support class lectures on the book collection and classification, main collection index, circulation and loan service, limited loan and…

  8. China Academic Library and Information System: An Academic Library Consortium in China.

    ERIC Educational Resources Information Center

    Dai, Longji; Chen, Ling; Zhang, Hongyang

    2000-01-01

    Describes CALIS (China Academic Library and Information System), a nationwide academic library consortium funded primarily by the Chinese government to serve multiple resource-sharing functions among the participating libraries, including online searching, interlibrary loan, document delivery, and coordinated purchasing and cataloging, by…

  9. A search for p-mode pulsations in white dwarf stars using the Berkeley Visible Imaging Tube detector

    NASA Astrophysics Data System (ADS)

    Kilkenny, D.; Welsh, B. Y.; Koen, C.; Gulbis, A. A. S.; Kotze, M. M.

    2014-01-01

    We present high-speed photometry (resolution 0.1 s) obtained during the commissioning of the Berkely Visible Imaging Tube system on the Southern African Large Telescope (SALT). The observations were an attempt to search for very rapid p-mode oscillations in white dwarf stars and included three DA stars known to be g-mode pulsators (ZZ Cet, HK Cet and AF Pic), one other DA star (WD 1056-384) not known to be variable and one AM Cvn star (HP Lib). No evidence was found for any variations greater than about 1 mmag in amplitude (˜0.1 per cent) at frequencies in excess of 60 mHz (periods <17 s) in any of the target stars, though several previously known g-mode frequencies were recovered.

  10. Binary and nonbinary description of hypointensity for search and retrieval of brain MR images

    NASA Astrophysics Data System (ADS)

    Unay, Devrim; Chen, Xiaojing; Ercil, Aytul; Cetin, Mujdat; Jasinschi, Radu; van Buchem, Marc A.; Ekin, Ahmet

    2009-01-01

    Diagnosis accuracy in the medical field, is mainly affected by either lack of sufficient understanding of some diseases or the inter/intra-observer variability of the diagnoses. We believe that mining of large medical databases can help improve the current status of disease understanding and decision making. In a previous study based on binary description of hypointensity in the brain, it was shown that brain iron accumulation shape provides additional information to the shape-insensitive features, such as the total brain iron load, that are commonly used in clinics. This paper proposes a novel, nonbinary description of hypointensity in the brain based on principal component analysis. We compare the complementary and redundant information provided by the two descriptions using Kendall's rank correlation coefficient in order to better understand the individual descriptions of iron accumulation in the brain and obtain a more robust and accurate search and retrieval system.

  11. SCIENCE PARAMETRICS FOR MISSIONS TO SEARCH FOR EARTH-LIKE EXOPLANETS BY DIRECT IMAGING

    SciTech Connect

    Brown, Robert A.

    2015-01-20

    We use N{sub t} , the number of exoplanets observed in time t, as a science metric to study direct-search missions like Terrestrial Planet Finder. In our model, N has 27 parameters, divided into three categories: 2 astronomical, 7 instrumental, and 18 science-operational. For various ''27-vectors'' of those parameters chosen to explore parameter space, we compute design reference missions to estimate N{sub t} . Our treatment includes the recovery of completeness c after a search observation, for revisits, solar and antisolar avoidance, observational overhead, and follow-on spectroscopy. Our baseline 27-vector has aperture D = 16 m, inner working angle IWA = 0.039'', mission time t = 0-5 yr, occurrence probability for Earth-like exoplanets η = 0.2, and typical values for the remaining 23 parameters. For the baseline case, a typical five-year design reference mission has an input catalog of ∼4700 stars with nonzero completeness, ∼1300 unique stars observed in ∼2600 observations, of which ∼1300 are revisits, and it produces N {sub 1} ∼ 50 exoplanets after one year and N {sub 5} ∼ 130 after five years. We explore offsets from the baseline for 10 parameters. We find that N depends strongly on IWA and only weakly on D. It also depends only weakly on zodiacal light for Z < 50 zodis, end-to-end efficiency for h > 0.2, and scattered starlight for ζ < 10{sup –10}. We find that observational overheads, completeness recovery and revisits, solar and antisolar avoidance, and follow-on spectroscopy are all important factors in estimating N.

  12. Generalizing the OpenURL Framework beyond References to Scholarly Works: The Bison-Fute Model; Digital Libraries and Education: Trends and Opportunities; E-Books and Their Future in Academic Libraries: An Overview; Penn State Visual Image User Study.

    ERIC Educational Resources Information Center

    Van de Sompel, Herbert; Beit-Arie, Oren; Roes, Hans; Snowhill, Lucia; Pisciotta, Henry; Brisson, Roger; Ferrin, Eric; Dooris, Michael; Spink, Amanda

    2001-01-01

    Includes four articles that discuss a conceptual framework for open and context-sensitive reference linking for Web-based scholarly information; issues for academic libraries due to increased use of information and communication technologies; the future of electronic books in academic libraries; and an academic library user study on the needs for…

  13. A Search for Fast Radio Bursts at Low Frequencies with Murchison Widefield Array High Time Resolution Imaging

    NASA Astrophysics Data System (ADS)

    Tingay, S. J.; Trott, C. M.; Wayth, R. B.; Bernardi, G.; Bowman, J. D.; Briggs, F.; Cappallo, R. J.; Deshpande, A. A.; Feng, L.; Gaensler, B. M.; Greenhill, L. J.; Hancock, P. J.; Hazelton, B. J.; Johnston-Hollitt, M.; Kaplan, D. L.; Lonsdale, C. J.; McWhirter, S. R.; Mitchell, D. A.; Morales, M. F.; Morgan, E.; Murphy, T.; Oberoi, D.; Prabu, T.; Udaya Shankar, N.; Srivani, K. S.; Subrahmanyan, R.; Webster, R. L.; Williams, A.; Williams, C. L.

    2015-12-01

    We present the results of a pilot study search for fast radio bursts (FRBs) using the Murchison Widefield Array (MWA) at low frequencies (139-170 MHz). We utilized MWA data obtained in a routine imaging mode from observations where the primary target was a field being studied for Epoch of Reionization detection. We formed images with 2 s time resolution and 1.28 MHz frequency resolution for 10.5 hr of observations, over 400 square degrees of the sky. We de-dispersed the dynamic spectrum in each of 372,100 resolution elements of 2 × 2 arcmin2, between dispersion measures of 170 and 675 pc cm-3. Based on the event rate calculations in Trott et al., which assume a standard candle luminosity of 8 × 1037 Js-1, we predict that with this choice of observational parameters, the MWA should detect (˜10, ˜2, ˜0) FRBs with spectral indices corresponding to (-2, -1, 0), based on a 7σ detection threshold. We find no FRB candidates above this threshold from our search, placing an event rate limit of \\lt 700 above 700 Jy ms per day per sky and providing evidence against spectral indices α \\lt -1.2 (S\\propto {ν }α ). We compare our event rate and spectral index limits with others from the literature. We briefly discuss these limits in light of recent suggestions that supergiant pulses from young neutron stars could explain FRBs. We find that such supergiant pulses would have to have much flatter spectra between 150 and 1400 MHz than have been observed from Crab giant pulses to be consistent with the FRB spectral index limit we derive.

  14. Millimeter wave radar system on a rotating platform for combined search and track functionality with SAR imaging

    NASA Astrophysics Data System (ADS)

    Aulenbacher, Uwe; Rech, Klaus; Sedlmeier, Johannes; Pratisto, Hans; Wellig, Peter

    2014-10-01

    Ground based millimeter wave radar sensors offer the potential for a weather-independent automatic ground surveillance at day and night, e.g. for camp protection applications. The basic principle and the experimental verification of a radar system concept is described, which by means of an extreme off-axis positioning of the antenna(s) combines azimuthal mechanical beam steering with the formation of a circular-arc shaped synthetic aperture (SA). In automatic ground surveillance the function of search and detection of moving ground targets is performed by means of the conventional mechanical scan mode. The rotated antenna structure designed as a small array with two or more RX antenna elements with simultaneous receiver chains allows to instantaneous track multiple moving targets (monopulse principle). The simultaneously operated SAR mode yields areal images of the distribution of stationary scatterers. For ground surveillance application this SAR mode is best suited for identifying possible threats by means of change detection. The feasibility of this concept was tested by means of an experimental radar system comprising of a 94 GHz (W band) FM-CW module with 1 GHz bandwidth and two RX antennas with parallel receiver channels, placed off-axis at a rotating platform. SAR mode and search/track mode were tested during an outdoor measurement campaign. The scenery of two persons walking along a road and partially through forest served as test for the capability to track multiple moving targets. For SAR mode verification an image of the area composed of roads, grassland, woodland and several man-made objects was reconstructed from the measured data.

  15. [The image of the dentist. Part 1: Results of a literature search].

    PubMed

    Wolf, Christian A; Ramseier, Christoph A

    2012-01-01

    The dentist enjoys a high degree of professional independence. He is seen as reliable and productive at work while carrying a big responsibility. His foremost social responsibility is to treat patients suffering from toothache and to promote oral health prevention for all people, regardless of their social status. At the same time, the dentist is prestigious, respected and honest. Comparable to other professions, however, dentistry is under public pressure. Media often associate the dental profession with negative properties such as sadism, immorality, or madness. Does the image of the dental profession suffer in this context? Our first article discusses the environmental factors which are identifiable to influence both each dentist and ultimately the whole image of dentistry.

  16. Machine Learning Search for Gamma-Ray Burst Afterglows in Optical Images

    NASA Astrophysics Data System (ADS)

    Topinka, M.

    2016-06-01

    Thanks to the advances in robotic telescopes, time domain astronomy leads to a large number of transient events detected in images every night. Data mining and machine learning tools used for object classification are presented. The goal is to automatically classify transient events for both further follow-up by a larger telescope and for statistical studies of transient events. Special attention is given to the identification of gamma-ray burst afterglows. Machine learning techniques are used to identify GROND gamma-ray burst afterglow among the astrophysical objects present in the SDSS archival images based on the g'-r', r'-i' and i'-z' color indices. The performance of the support vector machine, random forest and neural network algorithms is compared. A joint meta-classifier, built on top of the individual classifiers, can identify GRB afterglows with the overall accuracy of ≳ 90%.

  17. Report on the search for atmospheric holes using airs image data

    NASA Technical Reports Server (NTRS)

    Reinleitner, Lee A.

    1991-01-01

    Frank et al (1986) presented a very controversial hypothesis which states that the Earth is being bombarded by water-vapor clouds resulting from the disruption and vaporization of small comets. This hypothesis was based on single-pixel intensity decreases in the images of the earth's dayglow emissions at vacuum-ultraviolet (VUV) wavelengths using the DE-1 imager. These dark spots, or atmospheric holes, are hypothesized to be the result of VUV absorption by a water-vapor cloud between the imager and the dayglow-emitting region. Examined here is the VUV data set from the Auroral Ionospheric Remote Sensor (AIRS) instrument that was flown on the Polar BEAR satellite. AIRS was uniquely situated to test this hypothesis. Due to the altitude of the sensor, the holes should show multi-pixel intensity decreases in a scan line. A statistical estimate indicated that sufficient 130.4-nm data from AIRS existed to detect eight to nine such holes, but none was detected. The probability of this occurring is less than 1.0 x 10(exp -4). A statistical estimate indicated that sufficient 135.6-nm data from AIRS existed to detect approx. 2 holes, and two ambiguous cases are shown. In spite of the two ambiguous cases, the 135.6-nm data did not show clear support for the small-comet hypothesis. The 130.4-nm data clearly do not support the small-comet hypothesis.

  18. Characterizing populations and searching for diagnostics via elastic registration of MRI images

    NASA Astrophysics Data System (ADS)

    Pettey, David; Gee, James C.

    2001-07-01

    Given image data from two distinct populations and a family of functions, we find the scalar discriminant function which best discriminates between the populations. The goals are two-fold: first, to construct a discriminant function which can accurately and reliably classify subjects via the image data. Second, the best discriminant allows us to see which features in the images distinguish between the populations; these features can guide us to finding characteristic differences between the two groups even if these differences are not sufficient to perform classification. We apply our method to mid-sagittal MRI sections of the corpus callosum from 34 males and 52 females. While we are not certain of the ability of the derived discriminant function to perform sex classification, we find that regions in the anterior of the corpus callosum do appear to be more important for the discriminant function than other regions. This indicates there may be significant differences in the relative size of the splenium in males and females, as has been reported elsewhere. More notably, we applied previous methods which support this view on our larger data set, but found that these methods no longer show statistically significant differences between the male and female splenium.

  19. A nanobuffer reporter library for fine-scale imaging and perturbation of endocytic organelles | Office of Cancer Genomics

    Cancer.gov

    Endosomes, lysosomes and related catabolic organelles are a dynamic continuum of vacuolar structures that impact a number of cell physiological processes such as protein/lipid metabolism, nutrient sensing and cell survival. Here we develop a library of ultra-pH-sensitive fluorescent nanoparticles with chemical properties that allow fine-scale, multiplexed, spatio-temporal perturbation and quantification of catabolic organelle maturation at single organelle resolution to support quantitative investigation of these processes in living cells.

  20. Searching for molecular markers in head and neck squamous cell carcinomas (HNSCC) by statistical and bioinformatic analysis of larynx-derived SAGE libraries

    PubMed Central

    Silveira, Nelson JF; Varuzza, Leonardo; Machado-Lima, Ariane; Lauretto, Marcelo S; Pinheiro, Daniel G; Rodrigues, Rodrigo V; Severino, Patrícia; Nobrega, Francisco G; Silva, Wilson A; de B Pereira, Carlos A; Tajara, Eloiza H

    2008-01-01

    Background Head and neck squamous cell carcinoma (HNSCC) is one of the most common malignancies in humans. The average 5-year survival rate is one of the lowest among aggressive cancers, showing no significant improvement in recent years. When detected early, HNSCC has a good prognosis, but most patients present metastatic disease at the time of diagnosis, which significantly reduces survival rate. Despite extensive research, no molecular markers are currently available for diagnostic or prognostic purposes. Methods Aiming to identify differentially-expressed genes involved in laryngeal squamous cell carcinoma (LSCC) development and progression, we generated individual Serial Analysis of Gene Expression (SAGE) libraries from a metastatic and non-metastatic larynx carcinoma, as well as from a normal larynx mucosa sample. Approximately 54,000 unique tags were sequenced in three libraries. Results Statistical data analysis identified a subset of 1,216 differentially expressed tags between tumor and normal libraries, and 894 differentially expressed tags between metastatic and non-metastatic carcinomas. Three genes displaying differential regulation, one down-regulated (KRT31) and two up-regulated (BST2, MFAP2), as well as one with a non-significant differential expression pattern (GNA15) in our SAGE data were selected for real-time polymerase chain reaction (PCR) in a set of HNSCC samples. Consistent with our statistical analysis, quantitative PCR confirmed the upregulation of BST2 and MFAP2 and the downregulation of KRT31 when samples of HNSCC were compared to tumor-free surgical margins. As expected, GNA15 presented a non-significant differential expression pattern when tumor samples were compared to normal tissues. Conclusion To the best of our knowledge, this is the first study reporting SAGE data in head and neck squamous cell tumors. Statistical analysis was effective in identifying differentially expressed genes reportedly involved in cancer development. The

  1. Enterprise Reference Library

    NASA Technical Reports Server (NTRS)

    Bickham, Grandin; Saile, Lynn; Havelka, Jacque; Fitts, Mary

    2011-01-01

    Introduction: Johnson Space Center (JSC) offers two extensive libraries that contain journals, research literature and electronic resources. Searching capabilities are available to those individuals residing onsite or through a librarian s search. Many individuals have rich collections of references, but no mechanisms to share reference libraries across researchers, projects, or directorates exist. Likewise, information regarding which references are provided to which individuals is not available, resulting in duplicate requests, redundant labor costs and associated copying fees. In addition, this tends to limit collaboration between colleagues and promotes the establishment of individual, unshared silos of information The Integrated Medical Model (IMM) team has utilized a centralized reference management tool during the development, test, and operational phases of this project. The Enterprise Reference Library project expands the capabilities developed for IMM to address the above issues and enhance collaboration across JSC. Method: After significant market analysis for a multi-user reference management tool, no available commercial tool was found to meet this need, so a software program was built around a commercial tool, Reference Manager 12 by The Thomson Corporation. A use case approach guided the requirements development phase. The premise of the design is that individuals use their own reference management software and export to SharePoint when their library is incorporated into the Enterprise Reference Library. This results in a searchable user-specific library application. An accompanying share folder will warehouse the electronic full-text articles, which allows the global user community to access full -text articles. Discussion: An enterprise reference library solution can provide a multidisciplinary collection of full text articles. This approach improves efficiency in obtaining and storing reference material while greatly reducing labor, purchasing and

  2. Differentiation of Isodon japonica and Adulterants Based on Identification and Quantitation 14 Diterpenoids Using LC-MS-MS Library Search Approach and Hierarchical Cluster Analysis.

    PubMed

    Jin, Yiran; Tian, Tingting; Ma, Yinghua; Liu, Minyan; Xie, Weiwei; Wang, Xin; Xu, Huijun; Du, Yingfeng

    2016-03-01

    The aim of this study was to investigate the chemical differences between genunine Isodon japonica and its adulterants. A linear ion trap liquid chromatography with tandem mass spectrometry analytical method has been developed for the identification and quantification of 14 major diterpenoids in I. japonica. Data acquisition was multiple reaction monitoring transitions mode followed by an information-dependent acquisition using the enhanced product ion (EPI) scan in a single run. The target compounds were further identified and confirmed using an EPI spectral library. Overall validation of the assay was carried out including linearity, accuracy, precision, limits of detection and quantification. The results demonstrated that the method was selective, sensitive and reliable. The determination results of 21 batches of I. japonica and adulterants were then analyzed and differentiated by hierarchical clustering analysis.

  3. Advanced spectral imaging for noninvasive microanalysis of cultural heritage materials: review of application to documents in the U.S. Library of Congress.

    PubMed

    France, Fenella G

    2011-06-01

    Hyperspectral imaging was originally developed for remote sensing and astronomical applications, but adaptations of this technology have been of great benefit to the preservation of cultural heritage. Developments in noninvasive analytical techniques have advanced the preservation of cultural heritage materials by enabling the identification and analysis of a range of materials, utilizing their unique spectral response to nondestructively determine chemical composition, and determining states of deterioration and change due to environmental conditions. When used as a tool for noninvasive characterization of cultural heritage, these spectral imaging systems allow the collection of chemical identification information about materials without sampling, which is a critical factor for cultural heritage materials. The United States Library of Congress has been developing the application of hyperspectral imaging to the preservation and analysis of cultural heritage materials as a powerful noncontact technique. It allows noninvasive characterization of materials, by identifying and characterizing colorants, inks, and substrates with narrow-band illumination to protect the object while also monitoring deterioration or changes due to exhibit and other environmental conditions. Contiguous illumination from the ultraviolet, visible, and infrared spectral regions allows the capture of lost, obscured, and deteriorated information. The resulting image cube allows greater capabilities for mapping and coordinating a range of complementary chemical and spectral analyses. The capabilities of this technique are illustrated by a review of results from analysis of the Waldseemüller World Map, the L'Enfant plan for Washington, D.C., and the first draft of the U.S. Declaration of Independence.

  4. Bureaucracy and the School Library

    ERIC Educational Resources Information Center

    Shapiro, Lillian L.

    1973-01-01

    School libraries are at the mercy of school bureaucracy. Budgets, acquisitions and processing are controlled; red tape and communication gaps can be formidable. Libraries are at the bottom of the priority list and librarians must shed their submissive image to re-establish themselves at the forefront of education. (16 references) (DH)

  5. Facsimile Transmission Use in Libraries.

    ERIC Educational Resources Information Center

    Ryan, Joe

    Facsimile is an electro-mechanical system for transmitting and receiving images. Libraries began to take an active interest in using facsimile equipment in the latter part of the 1960s. Since that time, telefacsimile has been used by libraries primarily as a method of reducing document delivery time between cooperating interlending institutions.…

  6. Integrating the digital library puzzle: The library without walls at Los Alamos

    SciTech Connect

    Luce, R. E.

    1998-01-01

    Current efforts at the Research Library, Los Alamos National Laboratory (LANL), to develop digital library services are described. A key principle of LANL`s approach to delivering library information is the integration of products into a common interface and the use of the Web as the medium of service provision. Products described include science databases such as the SciSearch at LANL and electronic journals. Project developments described have significant ramifications for delivering library services over the Internet.

  7. Searching early bone metastasis on plain radiography by using digital imaging processing

    SciTech Connect

    Jaramillo-Nunez, A.; Perez-Meza, M.

    2012-10-23

    Some authors mention that it is not possible to detect early bone metastasis on plain radiography. In this work we use digital imaging processing to analyze three radiographs taken from a patient with bone metastasis discomfort on the right shoulder. The time period among the first and second radiography was approximately one month and between the first and the third one year. This procedure is a first approach in order to know if in this particular case it was possible to detect an early bone metastasis. The obtained results suggest that by carrying out a digital processing is possible to detect the metastasis since the radiography contains the information although visually it is not possible to observe it.

  8. On application of image analysis and natural language processing for music search

    NASA Astrophysics Data System (ADS)

    Gwardys, Grzegorz

    2013-10-01

    In this paper, I investigate a problem of finding most similar music tracks using, popular in Natural Language Processing, techniques like: TF-IDF and LDA. I de ned document as music track. Each music track is transformed to spectrogram, thanks that, I can use well known techniques to get words from images. I used SURF operation to detect characteristic points and novel approach for their description. The standard kmeans was used for clusterization. Clusterization is here identical with dictionary making, so after that I can transform spectrograms to text documents and perform TF-IDF and LDA. At the final, I can make a query in an obtained vector space. The research was done on 16 music tracks for training and 336 for testing, that are splitted in four categories: Hiphop, Jazz, Metal and Pop. Although used technique is completely unsupervised, results are satisfactory and encouraging to further research.

  9. A search for spectral units on the Uranian satellites using color ratio images

    NASA Astrophysics Data System (ADS)

    Bell, J. F., III; McCord, T. B.

    Twenty multispectral sets of calibrated coregistered Voyager 2 images of the Uranian satellites are analyzed in order to identify spectrally distinct surface units and associate these units with specific endogenic or exogenic surface processes. Several regions on each satellite where significant spectral/compositional diversity could be expected were identified by morphologic unit mapping. All the Uranian satellites were found to exhibit some degree of spectral variability associated with bright impact craters, with the typical trend being that the bright craters and their associated ejecta deposits are less red than the remainder of the satellites by 5 to 30 percent. Oberon shows the greatest variability, followed by Titania and Ariel. Morphologic features on Miranda and Ariel possibly associated with endogenic processes such as tectonism or ice volcanism do not exhibit as high a degree of spectral variability relative to their surroundings as bright impact craters.

  10. Searching early bone metastasis on plain radiography by using digital imaging processing

    NASA Astrophysics Data System (ADS)

    Jaramillo-Núñez, A.; Pérez-Meza, M.

    2012-10-01

    Some authors mention that it is not possible to detect early bone metastasis on plain radiography. In this work we use digital imaging processing to analyze three radiographs taken from a patient with bone metastasis discomfort on the right shoulder. The time period among the first and second radiography was approximately one month and between the first and the third one year. This procedure is a first approach in order to know if in this particular case it was possible to detect an early bone metastasis. The obtained results suggest that by carrying out a digital processing is possible to detect the metastasis since the radiography contains the information although visually it is not possible to observe it.

  11. A search for spectral units on the Uranian satellites using color ratio images

    NASA Technical Reports Server (NTRS)

    Bell, J. F., III; Mccord, T. B.

    1991-01-01

    Twenty multispectral sets of calibrated coregistered Voyager 2 images of the Uranian satellites are analyzed in order to identify spectrally distinct surface units and associate these units with specific endogenic or exogenic surface processes. Several regions on each satellite where significant spectral/compositional diversity could be expected were identified by morphologic unit mapping. All the Uranian satellites were found to exhibit some degree of spectral variability associated with bright impact craters, with the typical trend being that the bright craters and their associated ejecta deposits are less red than the remainder of the satellites by 5 to 30 percent. Oberon shows the greatest variability, followed by Titania and Ariel. Morphologic features on Miranda and Ariel possibly associated with endogenic processes such as tectonism or ice volcanism do not exhibit as high a degree of spectral variability relative to their surroundings as bright impact craters.

  12. Search for PET probes for imaging the globus pallidus studied with rat brain ex vivo autoradiography.

    PubMed

    Ishiwata, K; Ogi, N; Shimada, J; Wang, W; Ishii, K; Tanaka, A; Suzuki, F; Senda, M

    2000-12-01

    We have evaluated the feasibility of using four positron emission tomography (PET) tracers for imaging the globus pallidus by ex vivo autoradiography in rats. The tracers investigated were [11C]KF18446, [11C]SCH 23390 and [11C]raclopride for mapping adenosine A2A, dopamine D1 and dopamine D2 receptors, respectively, and [18F]FDG. The highest uptake by the globus pallidus was found for [11C]SCH 23390, followed by [18F]FDG, [11C]KF18446 and [11C]raclopride. The receptor-specific uptake by the globus pallidus was observed in [11C]KF18446 and [11C]SCH 23390, but not in [11C]raclopride. Uptake ratios of globus pallidus to the striatum for [18F]FDG and [11C]KF18446 were approximately 0.6, which was twice as large as that for [11C]SCH 23390. In a rat model of degeneration of striatopallidal gamma-aminobutyric acid-ergic-enkephalin neurons induced by intrastriatal injection of quinolinic acid, the uptake of [11C]KF18446 by the striatum and globus pallidus was remarkably reduced. To prove the visualization of the globus pallidus by PET with [18F]FDG and [11C]KF18446, PET-MRI registration technique and advances in PET technologies providing high-resolution PET scanner will be required. The metabolic activity of the globus pallidus could then be measured by PET with [18F]FDG, and [11C]KF18446 may be a candidate tracer for imaging the pallidal terminals projecting from the striatum.

  13. Libraries program

    USGS Publications Warehouse

    2011-01-01

    The U.S. Congress authorized a library for the U.S. Geological Survey (USGS) in 1879. The library was formally established in 1882 with the naming of the first librarian and began with a staff of three and a collection of 1,400 books. Today, the USGS Libraries Program is one of the world's largest Earth and natural science repositories and a resource of national significance used by researchers and the public worldwide.

  14. America's Star Libraries: Top-Rated Libraries

    ERIC Educational Resources Information Center

    Lance, Keith Curry; Lyons, Ray

    2009-01-01

    "Library Journal"'s national rating of public libraries, the "LJ" Index of Public Library Service 2009, Round 2, identifies 258 "star" libraries. Created by Keith Curry Lance and Ray Lyons and based on 2007 data from the IMLS, it rates 7,268 public libraries. The top libraries in each group get five, four, or three stars. All included libraries,…

  15. Image Querying by Image Professionals.

    ERIC Educational Resources Information Center

    Jorgensen, Corinne; Jorgensen, Peter

    2003-01-01

    Reports the analysis of search logs from a commercial image provider over a one-month period and discusses results in relation to previous findings. Analyzes image searches, image queries composing the search, user search modification strategies, results returned, and user browsing of results. (Author/AEF)

  16. Wide-scope screening of pesticides in fruits and vegetables using information-dependent acquisition employing UHPLC-QTOF-MS and automated MS/MS library searching.

    PubMed

    Wang, Zhibin; Cao, Yanzhong; Ge, Na; Liu, Xiaomao; Chang, Qiaoying; Fan, Chunlin; Pang, Guo-Fang

    2016-11-01

    This paper presents an application of ultra-high performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UHPLC-QTOF-MS) for simultaneous screening and identification of 427 pesticides in fresh fruit and vegetable samples. Both full MS scan mode for quantification, and an artificial-intelligence-based product ion scan mode information-dependent acquisition (IDA) providing automatic MS to MS/MS switching of product ion spectra for identification, were conducted by one injection. A home-in collision-induced-dissociation all product ions accurate mass spectra library containing more than 1700 spectra was developed prior to actual application. Both qualitative and quantitative validations of the method were carried out. The result showed that 97.4 % of the pesticides had the screening detection limit (SDL) less than 50 μg kg(-1) and more than 86.7 % could be confirmed by accurate MS/MS spectra embodied in the home-made library. Meanwhile, calibration curves covering two orders of magnitude were performed, and they were linear over the concentration range studied for the selected matrices (from 5 to 500 μg kg(-1) for most of the pesticides). Recoveries between 80 and 110 % in four matrices (apple, orange, tomato, and spinach) at two spiked levels, 10 and 100 μg kg(-1), was 88.7 or 86.8 %. Furthermore, the overall relative standard deviation (RSD, n = 12) for 94.3 % of the pesticides in 10 μg kg(-1) and 98.1 % of the pesticides in 100 μg kg(-1) spiked levels was less than 20 %. In order to validate the suitability for routine analysis, the method was applied to 448 fruit and vegetable samples purchased in different local markets. The results show 83.3 % of the analyzed samples have positive findings (higher than the limits of identification and quantification), and 412 commodity-pesticide combinations are identified in our scope. The approach proved to be a cost-effective, time-saving and powerful strategy for routine large

  17. PIERCING THE GLARE: A DIRECT IMAGING SEARCH FOR PLANETS IN THE SIRIUS SYSTEM

    SciTech Connect

    Thalmann, C.; Dominik, C.; Usuda, T.; Hayano, Y.; Minowa, Y.; Kenworthy, M.; Janson, M.; Mamajek, E. E.; Brandner, W.; Goto, M.; Henning, T.; Hinz, P. M.; Tamura, M.

    2011-05-10

    Astrometric monitoring of the Sirius binary system over the past century has yielded several predictions for an unseen third system component, the most recent one suggesting a {approx}<50 M{sub Jup} object in a {approx}6.3 year orbit around Sirius A. Here we present two epochs of high-contrast imaging observations performed with Subaru IRCS and AO188 in the 4.05 {mu}m narrowband Br {alpha} filter. These data surpass previous observations by an order of magnitude in detectable companion mass, allowing us to probe the relevant separation range down to the planetary-mass regime (6-12 M{sub Jup} at 1'', 2-4 M{sub Jup} at 2'', and 1.6 M{sub Jup} beyond 4''). We complement these data with one epoch of M-band observations from MMT/AO Clio, which reach comparable performance. No data set reveals any companion candidates above the 5{sigma} level, allowing us to refute the existence of Sirius C as suggested by the previous astrometric analysis. Furthermore, our Br {alpha} photometry of Sirius B confirms the lack of an infrared excess beyond the white dwarf's blackbody spectrum.

  18. [Searching for psychosocial endophenotypes in schizophrenia: the innovative role of brain imaging].

    PubMed

    Dusi, Nicola; Perlini, Cinzia; Bellani, Marcella; Brambilla, Paolo

    2012-01-01

    Schizophrenia is a disease with heterogeneous features and often a disabling longitudinal outcome. In order to achieve a better understanding of the disease, a detailed characterization and definition of symptomatology, social functioning and cognitive performance of patients is required. Imaging techniques may allow to identify measurable markers of different subgroups of patients, who share common clinical course and, probably, a similar hereditary pathway. The review offers a description of cross-sectional, predictive and longitudinal studies on the relationship between biological, clinical and psychosocial features of patients with schizophrenia. Patients with a more severe and disabling course of illness present larger ventricles, smaller prefrontal, temporal and occipital cortices and smaller subcortical regions such as basal ganglia, the thalamus and limbic areas. These alterations are predictive of a worse prognosis, as observed in predictive and longitudinal studies, both on chronic and first episode patients. The detection of more homogenous groups of patients with schizophrenia will help neurobiological research progress in this field. Furthermore, patients with similar clinical and biological features could undergo more tailored therapeutic and rehabilitative strategies.

  19. Features extraction of flotation froth images and BP neural network soft-sensor model of concentrate grade optimized by shuffled cuckoo searching algorithm.

    PubMed

    Wang, Jie-sheng; Han, Shuang; Shen, Na-na; Li, Shu-xia

    2014-01-01

    For meeting the forecasting target of key technology indicators in the flotation process, a BP neural network soft-sensor model based on features extraction of flotation froth images and optimized by shuffled cuckoo search algorithm is proposed. Based on the digital image processing technique, the color features in HSI color space, the visual features based on the gray level cooccurrence matrix, and the shape characteristics based on the geometric theory of flotation froth images are extracted, respectively, as the input variables of the proposed soft-sensor model. Then the isometric mapping method is used to reduce the input dimension, the network size, and learning time of BP neural network. Finally, a shuffled cuckoo search algorithm is adopted to optimize the BP neural network soft-sensor model. Simulation results show that the model has better generalization results and prediction accuracy.

  20. Features Extraction of Flotation Froth Images and BP Neural Network Soft-Sensor Model of Concentrate Grade Optimized by Shuffled Cuckoo Searching Algorithm

    PubMed Central

    Wang, Jie-sheng; Han, Shuang; Shen, Na-na; Li, Shu-xia

    2014-01-01

    For meeting the forecasting target of key technology indicators in the flotation process, a BP neural network soft-sensor model based on features extraction of flotation froth images and optimized by shuffled cuckoo search algorithm is proposed. Based on the digital image processing technique, the color features in HSI color space, the visual features based on the gray level cooccurrence matrix, and the shape characteristics based on the geometric theory of flotation froth images are extracted, respectively, as the input variables of the proposed soft-sensor model. Then the isometric mapping method is used to reduce the input dimension, the network size, and learning time of BP neural network. Finally, a shuffled cuckoo search algorithm is adopted to optimize the BP neural network soft-sensor model. Simulation results show that the model has better generalization results and prediction accuracy. PMID:25133210

  1. The Day Search Stood Still

    ERIC Educational Resources Information Center

    Sexton, Will

    2010-01-01

    That little rectangle with a button next to it? (Those things called search boxes but might just as well be called "resource drains.") Imagine it disappearing from a library's webpages. The intricate works behind these design elements make up a major portion of what library staff spends time and money developing, populating, supporting,…

  2. Library Advocacy

    ERIC Educational Resources Information Center

    Plunkett, Kate

    2010-01-01

    This paper is about the issue of advocacy. Standing at the vanguard of literacy, library media specialists have a unique role. However, it is time for media specialists to advocate their services in a proactive way. If library media specialists cannot, both individually and collectively, put advocacy at the forefront, then students will suffer the…

  3. Privatizing Libraries

    ERIC Educational Resources Information Center

    Jerrard, Jane; Bolt, Nancy; Strege, Karen

    2012-01-01

    This timely special report from ALA Editions provides a succinct but comprehensive overview of the "privatization" of public libraries. It provides a history of the trend of local and state governments privatizing public services and assets, and then examines the history of public library privatization right up to the California…

  4. Library Research.

    ERIC Educational Resources Information Center

    Wright, Nancy Kirkpatrick

    This workbook, designed for a Library Research course at Yavapai College, provides 15 lessons in advanced library reference skills. Each lesson provides explanatory text and reinforcement exercises. After Lesson I introduces specialized dictionaries and encyclopedias (e.g., for foreign languages, medicine, music, economics, social sciences, and…

  5. Computerized Online Bibliographic Searching. SPEC Kit #154.

    ERIC Educational Resources Information Center

    Hocker, Susan

    For this kit, 106 Association of Research Libraries (ARL) academic libraries were surveyed concerning: (1) current administration/organization; (2) evaluation; (3) patron relations; (4) services; and (5) the impact of online searching on collections. Responses were received from 83 libraries, many of which contributed sample materials. Analyses of…

  6. The JPL Library Information Retrieval System

    ERIC Educational Resources Information Center

    Walsh, Josephine

    1975-01-01

    The development, capabilities, and products of the computer-based retrieval system of the Jet Propulsion Laboratory Library are described. The system handles books and documents, produces a book catalog, and provides a machine search capability. (Author)

  7. Can Library Use Enhance Intercultural Education?

    ERIC Educational Resources Information Center

    Pihl, Joron

    2012-01-01

    This article explores the questions to what extent educational research addresses library use in education and how the library can contribute to intercultural education. The focus is primarily on elementary education in Europe. Analysis of research publications was based on searches for peer-reviewed journals in international databases, literary…

  8. Helping Students Use Virtual Libraries Effectively.

    ERIC Educational Resources Information Center

    Fitzgerald, Mary Ann; Galloway, Chad

    2001-01-01

    Describes a study in which online behavior of high school and undergraduate students using GALILEO (Georgia Library Learning Online), a virtual library, were observed. Topics include cognitive demands; technology literacy; domain knowledge; search strategies; relevance; evaluation of information; information literacy standards; and suggestions to…

  9. FALCON: An Interactive Library Instruction Tutorial.

    ERIC Educational Resources Information Center

    Dennis, Stefanie; Broughton, Kelly

    2000-01-01

    The Bowling Green State University Web tutorial, FALCON, models a standard library instructional session on use of the library's Web-based catalog. The tutorial's self-containment, achieved with a complex system of files and without a live catalog connection, enables users to learn how to search the catalog at a pace, time and place of their…

  10. Google's Evolution Leads to Library Revolution

    ERIC Educational Resources Information Center

    Jaworski, Susan; Sullivan, Roberta

    2011-01-01

    Do library catalogs compete with Google or is it the other way around? We know which came first but which will finish in the end? Only trained library professionals were considered qualified to develop reliable catalog records. However, with the increased sophistication of search engines, we are beginning to realize that a collaborative effort may…

  11. Subject Access in the Small Library.

    ERIC Educational Resources Information Center

    Turock, Betty J.; Shelton, Hildred C.

    This pilot study on the subject access problems of patrons of small to medium size libraries was designed to measure the extent to which users' vocabularies matched the search vocabulary of bibliographic records in the card catalog, and to enhance subject access by develooping a microcomputer system which integrated Library of Congress Subject…

  12. Google Scholar Usage: An Academic Library's Experience

    ERIC Educational Resources Information Center

    Wang, Ya; Howard, Pamela

    2012-01-01

    Google Scholar is a free service that provides a simple way to broadly search for scholarly works and to connect patrons with the resources libraries provide. The researchers in this study analyzed Google Scholar usage data from 2006 for three library tools at San Francisco State University: SFX link resolver, Web Access Management proxy server,…

  13. Guide to Library Research in Chicano Studies.

    ERIC Educational Resources Information Center

    Guerena, Salvador; Gonzalez, Raquel Quiroz

    Designed to acquaint persons conducting library research in Chicano Studies with the reference materials found in the University Library at the University of California-Santa Barbara, the manual provides information on the Coleccion Tloque Nahuaque, relevant subject headings, and a useful search strategy. Resources, staff, assigned reading…

  14. Guide to Library Research in Chicano Studies.

    ERIC Educational Resources Information Center

    Guerena, Salvador; Gonzales, Raquel Quiroz

    Designed to acquaint persons conducting library research in Chicano Studies with the numerous reference materials found in the University Library at the University of California-Santa Barbara, the manual provides information on the Coleccion Tloque Nahuaque, relevant subject headings, and a useful search strategy. The Coleccion Tloque Nahuaque,…

  15. Negotiating the Digital Library: Document Delivery.

    ERIC Educational Resources Information Center

    Jacobs, Neil; Morris, Anne

    1999-01-01

    The eLib-funded FIDDO (Focused Investigation of Document Delivery Options) project provides library managers/others with information to support policy decisions. Senior libraries were interviewed about the future of document delivery and interviews were analyzed with the support of NUD*IST (Nonnumerical Unstructured Data by Indexing, Searching and…

  16. Mapping of low-frequency chimeric yeast artificial chromosome libraries from human chromosomes 16 and 21 by fluorescence in situ hybridization and quantitative image analysis

    SciTech Connect

    Marrone, B.L.; Campbell, E.W.; Anzick, S.L.; Shera, K.; Campbell, M.; Yoshida, T.M.; McCormick, M.K.; Deaven, L. )

    1994-05-01

    Yeast artificial chromosome (YAC) clones from low-frequency chimeric libraries of human chromosomes 16 and 21 were mapped onto human diploid fibroblast metaphase chromosomes using fluorescence in situ hybridization (FISH) and digital imaging microscopy. YACs mapped onto chromosome 21 were selected to provide subregional location and ordering of known and unknown markers on the long arm of chromosome 21, particularly in the Down syndrome region (q22). YACs mapped onto chromosome 16 were selected to overlap regions spanning chromosome 16 cosmid maps. YAC clones were indirectly labeled with fluorescein, and the total DNA of the chromosome was counterstained with propidium iodide. A single image containing both the FISH signal and the whole chromosome was acquired for each chromosome of interest containing the fluorescent probe signal in a metaphase spread. From the digitized image, the fluorescence intensity profile through the long axis of the chromosome gave the total chromosome length and the probe position. The map position of the probe was expressed as the fractional length (FL) of the total chromosome relative to the end of the short arm (Flpter). From each clone hybridized, 20-40 chromosome images were analyzed. Thirty-eight YACs were mapped onto chromosome 16, and their FLs were distributed along the short and long arms. On chromosome 21, 47 YACs were mapped, including 12 containing known markers. To confirm the order of a dense population of YACs within the Down syndrome region, a two-color mapping strategy was used in which an anonymous YAC was located relative to one or two known markers on the metaphase chromosome. The chromosome FL maps have a 1- to 2-Mb resolution, and the FL measurement of each probe has a typical standard error of 0.5-1 Mb. 14 refs., 3 figs., 3 tabs.

  17. Genome Clone Libraries and Data from the Integrated Molecular Analysis of Genomes and their Expression (I.M.A.G.E.) Consortium

    DOE Data Explorer

    The I.M.A.G.E. Consortium was initiated in 1993 by four academic groups on a collaborative basis after informal discussions led to a common vision of how to achieve an important goal in the study of the human genome: the Integrated Molecular Analysis of Genomes and their Expression Consortium's primary goal is to create arrayed cDNA libraries and associated bioinformatics tools, and make them publicly available to the research community. The primary organisms of interest include intensively studied mammalian species, including human, mouse, rat and non-human primate species. The Consortium has also focused on several commonly studied model organisms; as part of this effort it has arrayed cDNAs from zebrafish, and Fugu (pufferfish) as well as Xenopus laevis and X. tropicalis (frog). Utilizing high speed robotics, over nine million individual cDNA clones have been arrayed into 384-well microtiter plates, and sufficient replicas have been created to distribute copies both to sequencing centers and to a network of five distributors located worldwide. The I.M.A.G.E. Consortium represents the world's largest public cDNA collection, and works closely with the National Institutes of Health's Mammalian Gene Collection(MGC) to help it achieve its goal of creating a full-length cDNA clone for every human and mouse gene. I.M.A.G.E. is also a member of the ORFeome Collaboration, working to generate a complete set of expression-ready open reading frame clones representing each human gene. Custom informatics tools have been developed in support of these projects to better allow the research community to select clones of interest and track and collect all data deposited into public databases about those clones and their related sequences. I.M.A.G.E. clones are publicly available, free of any royalties, and may be used by anyone agreeing with the Consortium's guidelines.

  18. MyLibrary: A Web Personalized Digital Library.

    ERIC Educational Resources Information Center

    Rocha, Catarina; Xexeo, Geraldo; da Rocha, Ana Regina C.

    With the increasing availability of information on Internet information providers, like search engines, digital libraries and online databases, it becomes more important to have personalized systems that help users to find relevant information. One type of personalization that is growing in use is recommender systems. This paper presents…

  19. High content image-based screening of a protease inhibitor library reveals compounds broadly active against Rift Valley fever virus and other highly pathogenic RNA viruses.

    PubMed

    Mudhasani, Rajini; Kota, Krishna P; Retterer, Cary; Tran, Julie P; Whitehouse, Chris A; Bavari, Sina

    2014-08-01

    High content image-based screening was developed as an approach to test a protease inhibitor small molecule library for antiviral activity against Rift Valley fever virus (RVFV) and to determine their mechanism of action. RVFV is the causative agent of severe disease of humans and animals throughout Africa and the Arabian Peninsula. Of the 849 compounds screened, 34 compounds exhibited ≥ 50% inhibition against RVFV. All of the hit compounds could be classified into 4 distinct groups based on their unique chemical backbone. Some of the compounds also showed broad antiviral activity against several highly pathogenic RNA viruses including Ebola, Marburg, Venezuela equine encephalitis, and Lassa viruses. Four hit compounds (C795-0925, D011-2120, F694-1532 and G202-0362), which were most active against RVFV and showed broad-spectrum antiviral activity, were selected for further evaluation for their cytotoxicity, dose response profile, and mode of action using classical virological methods and high-content imaging analysis. Time-of-addition assays in RVFV infections suggested that D011-2120 and G202-0362 targeted virus egress, while C795-0925 and F694-1532 inhibited virus replication. We showed that D011-2120 exhibited its antiviral effects by blocking microtubule polymerization, thereby disrupting the Golgi complex and inhibiting viral trafficking to the plasma membrane during virus egress. While G202-0362 also affected virus egress, it appears to do so by a different mechanism, namely by blocking virus budding from the trans Golgi. F694-1532 inhibited viral replication, but also appeared to inhibit overall cellular gene expression. However, G202-0362 and C795-0925 did not alter any of the morphological features that we examined and thus may prove to be good candidates for antiviral drug development. Overall this work demonstrates that high-content image analysis can be used to screen chemical libraries for new antivirals and to determine their mechanism of action and

  20. Comparison of Iranian National Medical Library with digital libraries of selected countries

    PubMed Central

    Zare-Farashbandi, Firoozeh; Najafi, Nayere Sadat Soleimanzade; Atashpour, Bahare

    2014-01-01

    Introduction: The important role of information and communication technologies and their influence on methods of storing, retrieving information in digital libraries, has not only changed the meanings behind classic library activates but has also created great changes in their services. However, it seems that not all digital libraries provide their users with similar services and only some of them are successful in fulfilling their role in digital environment. The Iranian National Medical library is among those that appear to come short compared to other digital libraries around the world. By knowing the different services provided by digital libraries worldwide, one can evaluate the services provided by Iranian National Medical library. The goal of this study is a comparison between Iranian National Medical library and digital libraries of selected countries. Materials and Methods: This is an applied study and uses descriptive – survey method. The statistical population is the digital libraries around the world which were actively providing library services between October and December 2011 and were selected by using the key word “Digital Library” in Google search engine. The data-gathering tool was direct access to the websites of these digital libraries. The statistical study is descriptive and Excel software was used for data analysis and plotting of the charts. Results: The findings showed that among the 33 digital libraries investigated worldwide, most of them provided Browse (87.87%), Search (84.84%), and Electronic information retrieval (57.57%) services. The “Help” in public services (48/48%) and “Interlibrary Loan” in traditional services (27/27%) had the highest frequency. The Iranian National Medical library provides more digital services compared to other libraries but has less classic and public services and has less than half of possible public services. Other than Iranian National Medical library, among the 33 libraries investigated

  1. Spectral characterization of coastal sediments using Field Spectral Libraries, Airborne Hyperspectral Images and Topographic LiDAR Data (FHyL)

    NASA Astrophysics Data System (ADS)

    Manzo, Ciro; Valentini, Emiliana; Taramelli, Andrea; Filipponi, Federico; Disperati, Leonardo

    2015-04-01

    Beach dune systems are important for coastal zone ecosystems as they provide natural sea defences that dissipate wave energy. Geomorphological models of this near-shore topography require site-specific sediment composition, grain size and moisture content as inputs. Hyperspectral, field radiometry and LiDAR remote sensing can be used as tools by providing synoptic maps of these properties. However, multi-remote sensing of near-shore beach images can only be interpreted if there are adequate bio-geophysical or empirical models for information extraction. Our aim was thus to model the effects of varying sediment properties on the reflectance in both field and laboratory conditions within the FHyL (Field Spectral Libraries, Airborne Hyperspectral Images and Topographic LiDAR) procedure, using a multisource dataset (airborne Hyperspectral - MIVIS and topographic LiDAR - Hawk-eye II and field radiometry). The methodology consisted of (i) acquisition of simultaneous multi-source datasets (airborne Hyperspectral - MIVIS and topographic LiDAR - Hawk-eye) (ii) hyperspectral measurements of sediment mixtures with varying physical characteristics (moisture, grain size and minerals) in field and laboratory conditions, (iii) determination and quantification of specific absorption features, and (iv) correlation between the absorption features and physical parameters cited above. Results showed the potential of hyperspectral signals to assess the effect of moisture, grain-size and mineral composition on sediment properties.

  2. Online Bibliographic Retrieval Services in Various Australian Tertiary Institutions: Trends in the Scope and Nature of Online Searching and an Evaluation of Patron Satisfaction. ANU Library Occasional Paper Number 2.

    ERIC Educational Resources Information Center

    Wood, Fiona

    A 1981 investigation by the Australian National University (ANU) library of the scope and nature of online bibliographic retrieval services provided by the 19 Australian university libraries and 5 of the Australian central Institute of Technology libraries, and a further study carried out in 1980-81 to assess the satisfaction of patrons with…

  3. Computerized image-searching method for finding correct patients for misfiled chest radiographs in a PACS server by use of biological fingerprints.

    PubMed

    Toge, Risa; Morishita, Junji; Sasaki, Yasuo; Doi, Kunio

    2013-07-01

    We have developed an automated image-searching method based on biological fingerprints for identifying correct patients in misfiled chest radiographs in a picture archiving and communication system (PACS) server. We used five biological fingerprints including distinctive anatomic structures in a misfiled chest radiograph of an unknown patient to find another image of the same patient stored with correct patient information in a PACS server. The correlation values were determined for the corresponding biological fingerprints in all images in the image server. The correlation indices as a measure of the overall similarity of the two images were determined from the summation of five correlation values and the combination of correlation values with the weighting factors. Finally, the correct patient was identified automatically by the image with the highest correlation index. By use of the summation of five correlation values as the correlation index, 78.0% (156/200) of the 200 patients for misfiled images were correctly identified in the database. When we applied the weighting factors for each biological fingerprint to determine the correlation index, the performance in identifying the correct patient was improved to 87.5% (175/200). An additional 5.0% (10/200) of images were included in the Top 10 ranking of the correlation index in the database. These cases could be identified manually by radiology personnel. We conclude that the automated image-searching method based on biological fingerprints with weighting factors would be useful for identification of the correct patient in the case of misfiled chest radiographs in a PACS server.

  4. Optimizing use of library technology.

    PubMed

    Wink, Diane M; Killingsworth, Elizabeth K

    2011-01-01

    In this bimonthly series, the author examines how nurse educators can use the Internet and Web-based computer technologies such as search, communication, collaborative writing tools; social networking and social bookmarking sites; virtual worlds; and Web-based teaching and learning programs. This article describes optimizing the use of library technology.

  5. Library Networks and Electronic Publishing.

    ERIC Educational Resources Information Center

    Olvey, Lee D.

    1995-01-01

    Provides a description of present and proposed plans and strategies of OCLC (Online Computer Library Center) and their relationship to electronic publishing. FirstSearch (end-user access to secondary information), GUIDON (electronic journals online) and FastDoc (document delivery) are emphasized. (JKP)

  6. Technology and the Modern Library.

    ERIC Educational Resources Information Center

    Boss, Richard W.

    1984-01-01

    Overview of the impact of information technology on libraries highlights turnkey vendors, bibliographic utilities, commercial suppliers of records, state and regional networks, computer-to-computer linkages, remote database searching, terminals and microcomputers, building local databases, delivery of information, digital telefacsimile,…

  7. International Relations: Library Instruction Unit.

    ERIC Educational Resources Information Center

    Hall, Cathie

    In support of the United States Naval Academy's program in international relations, library reference staff developed an instruction unit featuring appropriate research guides and a videotape produced at the Naval Academy Educational Resource Center. The videotape illustrates a sample search strategy and then highlights the use of four basic…

  8. Callpath Library

    SciTech Connect

    Gamblin, T.

    2013-11-09

    The "Callpath Library" is a software abstraction layer over a number of stack tracing utilities. It allows tool develoopers to conveniently represent and mNipulate call paths gathered fro U. Wisconsin's Stackwalker API and GNU Backtrace.

  9. Academic Libraries

    ERIC Educational Resources Information Center

    Library Journal, 1970

    1970-01-01

    Building data is given for the following academic libraries: (1) Rosary College, River Forest, Illinois; (2) Abilene Christian College, Abilene, Texas; (3) University of California, San Diego, La Jolla, California. (MF)

  10. Evaluating School Library Information Services in the Digital Age.

    ERIC Educational Resources Information Center

    Everhart, Nancy

    2000-01-01

    Discusses criteria for evaluating school library information services. Highlights include types of services; physical facilities; library usage; circulation statistics; changes due to technology; fill rate, or the percentage of successful searches for library materials; OPAC (online public access catalog) reports; observation; and examining…

  11. Shaping the library of the future: Digital library developments at Los Alamos National Laboratory`s Research Library

    SciTech Connect

    Luce, R. E.

    1994-10-01

    This paper offers an overview of current efforts at the Research Library, Los Alamos National Laboratory, (LANL), to develop digital library services. Current projects of LANL`s Library without Walls initiative are described. Although the architecture of digital libraries generally is experimental and subject to debate, one principle of LANL`s approach to delivering library information is the use of Mosaic as a client for the Research Library`s resources. Several projects under development have significant ramifications for delivering library services over the Internet. Specific efforts via Mosaic include support for preprint databases, providing access to citation databases, and access to a digital image database of unclassified Los Alamos technical reports.

  12. Personal Virtual Libraries

    ERIC Educational Resources Information Center

    Pappas, Marjorie L.

    2004-01-01

    Virtual libraries are becoming more and more common. Most states have a virtual library. A growing number of public libraries have a virtual presence on the Web. Virtual libraries are a growing addition to school library media collections. The next logical step would be personal virtual libraries. A personal virtual library (PVL) is a collection…

  13. America's Star Libraries

    ERIC Educational Resources Information Center

    Lyons, Ray; Lance, Keith Curry

    2009-01-01

    "Library Journal"'s new national rating of public libraries, the "LJ" Index of Public Library Service, identifies 256 "star" libraries. It rates 7,115 public libraries. The top libraries in each group get five, four, or three Michelin guide-like stars. All included libraries, stars or not, can use their scores to learn from their peers and improve…

  14. Gamma-ray spectral analysis algorithm library

    SciTech Connect

    Egger, A. E.

    2013-05-06

    The routines of the Gauss Algorithms library are used to implement special purpose products that need to analyze gamma-ray spectra from Ge semiconductor detectors as a part of their function. These routines provide the ability to calibrate energy, calibrate peakwidth, search for peaks, search for regions, and fit the spectral data in a given region to locate gamma rays.

  15. Needle Federated Search Engine

    SciTech Connect

    2009-12-01

    The Idaho National Laboratory (INL) has combined a number of technologies, tools, and resources to accomplish a new means of federating search results. The resulting product is a search engine called Needle, an open-source-based tool that the INL uses internally for researching across a wide variety of information repositories. Needle has a flexible search interface that allows end users to point at any available data source. A user can select multiple sources such as commercial databases (Web of Science, Engineering Index), external resources (WorldCat, Google Scholar), and internal corporate resources (email, document management system, library collections) in a single interface with one search query. In the future, INL hopes to offer this open-source engine to the public. This session will outline the development processes for making Needle™s search interface and simplifying the federation of internal and external data sources.

  16. Collection Metadata Solutions for Digital Library Applications

    NASA Technical Reports Server (NTRS)

    Hill, Linda L.; Janee, Greg; Dolin, Ron; Frew, James; Larsgaard, Mary

    1999-01-01

    Within a digital library, collections may range from an ad hoc set of objects that serve a temporary purpose to established library collections intended to persist through time. The objects in these collections vary widely, from library and data center holdings to pointers to real-world objects, such as geographic places, and the various metadata schemas that describe them. The key to integrated use of such a variety of collections in a digital library is collection metadata that represents the inherent and contextual characteristics of a collection. The Alexandria Digital Library (ADL) Project has designed and implemented collection metadata for several purposes: in XML form, the collection metadata "registers" the collection with the user interface client; in HTML form, it is used for user documentation; eventually, it will be used to describe the collection to network search agents; and it is used for internal collection management, including mapping the object metadata attributes to the common search parameters of the system.

  17. Search systems and computer-implemented search methods

    DOEpatents

    Payne, Deborah A.; Burtner, Edwin R.; Hampton, Shawn D.; Gillen, David S.; Henry, Michael J.

    2017-03-07

    Search systems and computer-implemented search methods are described. In one aspect, a search system includes a communications interface configured to access a plurality of data items of a collection, wherein the data items include a plurality of image objects individually comprising image data utilized to generate an image of the respective data item. The search system may include processing circuitry coupled with the communications interface and configured to process the image data of the data items of the collection to identify a plurality of image content facets which are indicative of image content contained within the images and to associate the image objects with the image content facets and a display coupled with the processing circuitry and configured to depict the image objects associated with the image content facets.

  18. Search systems and computer-implemented search methods

    DOEpatents

    Payne, Deborah A.; Burtner, Edwin R.; Bohn, Shawn J.; Hampton, Shawn D.; Gillen, David S.; Henry, Michael J.

    2015-12-22

    Search systems and computer-implemented search methods are described. In one aspect, a search system includes a communications interface configured to access a plurality of data items of a collection, wherein the data items include a plurality of image objects individually comprising image data utilized to generate an image of the respective data item. The search system may include processing circuitry coupled with the communications interface and configured to process the image data of the data items of the collection to identify a plurality of image content facets which are indicative of image content contained within the images and to associate the image objects with the image content facets and a display coupled with the processing circuitry and configured to depict the image objects associated with the image content facets.

  19. Informatics in Radiology: What Can You See in a Single Glance and How Might This Guide Visual Search in Medical Images?

    PubMed Central

    Evans, Karla; Võ, Melissa L. -H.; Jacobson, Francine L.; Wolfe, Jeremy M.

    2013-01-01

    Diagnostic accuracy for radiologists is above that expected by chance when they are exposed to a chest radiograph for only one-fifth of a second, a period too brief for more than a single voluntary eye movement. How do radiologists glean information from a first glance at an image? It is thought that this expert impression of the gestalt of an image is related to the everyday, immediate visual understanding of the gist of a scene. Several high-speed mechanisms guide our search of complex images. Guidance by basic features (such as color) requires no learning, whereas guidance by complex scene properties is learned. It is probable that both hardwired guidance by basic features and learned guidance by scene structure become part of radiologists’ expertise. Search in scenes may be best explained by a two-pathway model: Object recognition is performed via a selective pathway in which candidate targets must be individually selected for recognition. A second, nonselective pathway extracts information from global or statistical information without selecting specific objects. An appreciation of the role of nonselective processing may be particularly useful for understanding what separates novice from expert radiologists and could help establish new methods of physician training based on medical image perception. © RSNA, 2012 PMID:23104971

  20. 3D Imaging.

    ERIC Educational Resources Information Center

    Hastings, S. K.

    2002-01-01

    Discusses 3 D imaging as it relates to digital representations in virtual library collections. Highlights include X-ray computed tomography (X-ray CT); the National Science Foundation (NSF) Digital Library Initiatives; output peripherals; image retrieval systems, including metadata; and applications of 3 D imaging for libraries and museums. (LRW)

  1. Reference in the Age of Automation: Changes in Reference Service at Chemical Abstracts Service Library.

    ERIC Educational Resources Information Center

    Hodges, Pauline R.

    1989-01-01

    Describes the use of office automation equipment at Chemical Abstracts Services (CAS) Library Services and its impact on the reference services offered. Functions discussed include the use of electronic mail for 24-hour library access, online searching, online access to other library collections, and coordination of online searching done by CAS…

  2. Librarians Do It Differently: Comparative Usability Testing with Students and Library Staff

    ERIC Educational Resources Information Center

    Turner, Nancy B.

    2011-01-01

    Usability testing on library search tools was conducted with ten students and eighteen library staff members at Syracuse University. The study addressed three research questions: (1) Do the ways in which librarians carry out search tasks on the library Web site vary from those of student users?; (2) Are those variations indicative of different…

  3. Targeted Conformational Search with Map-Restrained Self-Guided Langevin Dynamics: Application to Flexible Fitting of Electron Microscopy Images

    PubMed Central

    Wu, Xiongwu; Subramaniam, Sriram; Case, David A.; Wu, Katherine W.; Brooks, Bernard R.

    2013-01-01

    We present a map-restrained self-guided Langevin dynamics (MapSGLD) simulation method for efficient targeted conformational search. The targeted conformational search represents simulations under restraints defined by experimental observations and/or by user specified structural requirements. Through map-restraints, this method provides an efficient way to maintain substructures and to set structure targets during conformational searching. With an enhanced conformational searching ability of self-guided Langevin dynamics, this approach is suitable for simulating large-scale conformational changes, such as the formation of macromolecular assemblies and transitions between different conformational states. Using several examples, we illustrate the application of this method in flexible fitting of atomic structures into density maps from cryo-electron microscopy. PMID:23876978

  4. The Weaknesses of Full-Text Searching

    ERIC Educational Resources Information Center

    Beall, Jeffrey

    2008-01-01

    This paper provides a theoretical critique of the deficiencies of full-text searching in academic library databases. Because full-text searching relies on matching words in a search query with words in online resources, it is an inefficient method of finding information in a database. This matching fails to retrieve synonyms, and it also retrieves…

  5. Zero Result Searches. . . How to Minimize Them.

    ERIC Educational Resources Information Center

    Atkinson, Steve

    1986-01-01

    Based on manual observation of 187 zero result online searches at a university library, this article addresses three types of problems that can produce such search results: multiple database searching, topic negotiation, and database availability. A summary of conceptual and practical recommendations for searchers are provided. (6 references) (EJS)

  6. Multitasking Information Seeking and Searching Processes.

    ERIC Educational Resources Information Center

    Spink, Amanda; Ozmutlu, H. Cenk; Ozmutlu, Seda

    2002-01-01

    Presents findings from four studies of the prevalence of multitasking information seeking and searching by Web (via the Excite search engine), information retrieval system (mediated online database searching), and academic library users. Highlights include human information coordinating behavior (HICB); and implications for models of information…

  7. Precision and Recall in Title Keyword Searches.

    ERIC Educational Resources Information Center

    McJunkin, Monica Cahill

    This study examines precision and recall for title and keyword searches performed in the "FirstSearch" WorldCat database when keywords are used with and without adjacency of terms specified. A random sample of 68 titles in economics were searched in the OCLC (Online Computer Library Center) Online Union Catalog in order to obtain their…

  8. Local image descriptor-based searching framework of usable similar cases in a radiation treatment planning database for stereotactic body radiotherapy

    NASA Astrophysics Data System (ADS)

    Nonaka, Ayumi; Arimura, Hidetaka; Nakamura, Katsumasa; Shioyama, Yoshiyuki; Soufi, Mazen; Magome, Taiki; Honda, Hiroshi; Hirata, Hideki

    2014-03-01

    Radiation treatment planning (RTP) of the stereotactic body radiotherapy (SBRT) was more complex compared with conventional radiotherapy because of using a number of beam directions. We reported that similar planning cases could be helpful for determination of beam directions for treatment planners, who have less experiences of SBRT. The aim of this study was to develop a framework of searching for usable similar cases to an unplanned case in a RTP database based on a local image descriptor. This proposed framework consists of two steps searching and rearrangement. In the first step, the RTP database was searched for 10 cases most similar to object cases based on the shape similarity of two-dimensional lung region at the isocenter plane. In the second step, the 5 most similar cases were selected by using geometric features related to the location, size and shape of the planning target volume, lung and spinal cord. In the third step, the selected 5 cases were rearranged by use of the Euclidean distance of a local image descriptor, which is a similarity index based on the magnitudes and orientations of image gradients within a region of interest around an isocenter. It was assumed that the local image descriptor represents the information around lung tumors related to treatment planning. The cases, which were selected as cases most similar to test cases by the proposed method, were more resemble in terms of the tumor location than those selected by a conventional method. For evaluation of the proposed method, we applied a similar-cases-based beam arrangement method developed in the previous study to the similar cases selected by the proposed method based on a linear registration. The proposed method has the potential to suggest the superior beam-arrangements from the treatment point of view.

  9. Underground Libraries.

    ERIC Educational Resources Information Center

    Fuhlrott, Rolf

    1986-01-01

    Discussion of underground buildings constructed primarily during last two decades for various reasons (energy conservation, density of environment, preservation of landscape and historic buildings) notes advantages, disadvantages, and psychological and design considerations. Examples of underground libraries, built mainly in United States, are…

  10. Forward with Imagination: Innovative Library Client Services for the 21st Century.

    ERIC Educational Resources Information Center

    Bundy, Alan

    This paper considers innovation in academic libraries. The first part explores the definition and nature of innovation and the literature relevant to academic libraries in particular. In the second part, the outcomes of a search of library World Wide Web sites and a survey of International Association of Technological University Libraries (IATUL)…

  11. Library fingerprints: a novel approach to the screening of virtual libraries.

    PubMed

    Klon, Anthony E; Diller, David J

    2007-01-01

    We propose a novel method to prioritize libraries for combinatorial synthesis and high-throughput screening that assesses the viability of a particular library on the basis of the aggregate physical-chemical properties of the compounds using a naïve Bayesian classifier. This approach prioritizes collections of related compounds according to the aggregate values of their physical-chemical parameters in contrast to single-compound screening. The method is also shown to be useful in screening existing noncombinatorial libraries when the compounds in these libraries have been previously clustered according to their molecular graphs. We show that the method used here is comparable or superior to the single-compound virtual screening of combinatorial libraries and noncombinatorial libraries and is superior to the pairwise Tanimoto similarity searching of a collection of combinatorial libraries.

  12. Turkish Libraries: Historical Context.

    ERIC Educational Resources Information Center

    Cakin, Irfan

    1984-01-01

    Summary of the development of libraries in Turkey highlights the existence of libraries in the ninth century, the Shamssaddin Altunaba Medrese library in Konya, libraries established during the Ottoman era, reports to reform libraries (1869-70, 1909), and reports and library developments attributed to the Republican Era beginning in 1923. (EJS)

  13. Library Research and Statistics.

    ERIC Educational Resources Information Center

    Lynch, Mary Jo; St. Lifer, Evan; Halstead, Kent; Fox, Bette-Lee; Miller, Marilyn L.; Shontz, Marilyn L.

    2001-01-01

    These nine articles discuss research and statistics on libraries and librarianship, including libraries in the United States, Canada, and Mexico; acquisition expenditures in public, academic, special, and government libraries; price indexes; state rankings of public library data; library buildings; expenditures in school library media centers; and…

  14. How to Use the Marine Realms Information Bank (MRIB) Digital Libraries

    USGS Publications Warehouse

    Lightsom, Frances L.; Allwardt, Alan O.

    2009-01-01

    Marine Realms Information Bank (MRIB) digital libraries provide access to free online scientific resources about oceans, coasts, and coastal watersheds. MRIB allows category, geographic, and keyword searching, alone or in combination. Instructions for searching the three MRIB libraries and for refining the searches are explained in detail.

  15. Medical library services in Kuwait: history and future prospects.

    PubMed Central

    Sullivan, M G; Brennen, P W

    1984-01-01

    Despite immense resources and a growing interest in education and libraries, library development in Kuwait has been restricted by the problems common to all developing countries. These include an overdose of bureaucracy, lack of trained librarians, and little perception of the library's importance in the educational system. Medical librarianship is virtually a new field. The only medical library of any significance in the country is the Faculty of Medicine Library established in 1974 to serve the newly organized Faculty of Medicine of Kuwait University. In recent years, the Faculty of Medicine Library has gone through several reassessments and many changes. It has expanded its collection, begun computerized searching, and recruited several professional librarians. Now semiautonomous from the university's Libraries Department and housed in a new, modern building, the library has the potential to become the main medical library in the Persian Gulf area. PMID:6365225

  16. Methods for combinatorial and parallel library design.

    PubMed

    Schnur, Dora M; Beno, Brett R; Tebben, Andrew J; Cavallaro, Cullen

    2011-01-01

    Diversity has historically played a critical role in design of combinatorial libraries, screening sets and corporate collections for lead discovery. Large library design dominated the field in the 1990s with methods ranging anywhere from purely arbitrary through property based reagent selection to product based approaches. In recent years, however, there has been a downward trend in library size. This was due to increased information about the desirable targets gleaned from the genomics revolution and to the ever growing availability of target protein structures from crystallography and homology modeling. Creation of libraries directed toward families of receptors such as GPCRs, kinases, nuclear hormone receptors, proteases, etc., replaced the generation of libraries based primarily on diversity while single target focused library design has remained an important objective. Concurrently, computing grids and cpu clusters have facilitated the development of structure based tools that screen hundreds of thousands of molecules. Smaller "smarter" combinatorial and focused parallel libraries replaced those early un-focused large libraries in the twenty-first century drug design paradigm. While diversity still plays a role in lead discovery, the focus of current library design methods has shifted to receptor based methods, scaffold hopping/bio-isostere searching, and a much needed emphasis on synthetic feasibility. Methods such as "privileged substructures based design" and pharmacophore based design still are important methods for parallel and small combinatorial library design. This chapter discusses some of the possible design methods and presents examples where they are available.

  17. Search for cool giant exoplanets around young and nearby stars. VLT/NaCo near-infrared phase-coronagraphic and differential imaging

    NASA Astrophysics Data System (ADS)

    Maire, A.-L.; Boccaletti, A.; Rameau, J.; Chauvin, G.; Lagrange, A.-M.; Bonnefoy, M.; Desidera, S.; Sylvestre, M.; Baudoz, P.; Galicher, R.; Mouillet, D.

    2014-06-01

    Context. Spectral differential imaging (SDI) is part of the observing strategy of current and future high-contrast imaging instruments. It aims to reduce the stellar speckles that prevent the detection of cool planets by using in/out methane-band images. It attenuates the signature of off-axis companions to the star, such as angular differential imaging (ADI). However, this attenuation depends on the spectral properties of the low-mass companions we are searching for. The implications of this particularity on estimating the detection limits have been poorly explored so far. Aims: We perform an imaging survey to search for cool (Teff< 1000-1300 K) giant planets at separations as close as 5-10 AU. We also aim to assess the sensitivity limits in SDI data taking the photometric bias into account. This will lead to a better view of the SDI performance. Methods: We observed a selected sample of 16 stars (age <200 Myr, distance <25 pc) with the phase-mask coronagraph, SDI, and ADI modes of VLT/NaCo. Results: We do not detect any companions. As for the estimation of the sensitivity limits, we argue that the SDI residual noise cannot be converted into mass limits because it represents a differential flux, unlike what is done for single-band images, in which fluxes are measured. This results in degeneracies for the mass limits, which may be removed with the use of single-band constraints. We instead employ a method of directly determining the mass limits and compare the results from a combined processing SDI-ADI (ASDI) and ADI. The SDI flux ratio of a planet is the critical parameter for the ASDI performance at close-in separations (≲1''). The survey is sensitive to cool giant planets beyond 10 AU for 65% and 30 AU for 100% of the sample. Conclusions: For close-in separations, the optimal regime for SDI corresponds to SDI flux ratios higher than ~2. According to the BT-Settl model, this translates into Teff ≲ 800 K, which is significantly lower than the methane

  18. Art Libraries Section. Special Libraries Division. Papers.

    ERIC Educational Resources Information Center

    International Federation of Library Associations, The Hague (Netherlands).

    Papers on art libraries, librarianship, and documentation presented at the 1982 International Federation of Library Associations (IFLA) conference include: (1) "The Tyranny of Distance: Art Libraries in Canada," a description by Mary F. Williamson of Canada's regional art libraries which serve both art students and the general public;…

  19. Strengthening State Library Administrative Agency (Territorial Library).

    ERIC Educational Resources Information Center

    Nieves M. Flores Memorial Library, Agana, Guam.

    This document describes the Basic State Plan Amendments for the Library Services and Construction Act in Guam and the regulations promulgated thereunder. The major projects described under the plan are: Strengthening State Library Administrative Agency; Staff Development; Library Collections, Extention Services, Institutional Libraries; and…

  20. Land Treatment Digital Library

    USGS Publications Warehouse

    Pilliod, David S.

    2009-01-01

    Across the country, public land managers make hundreds of decisions each year that influence landscapes and ecosystems within the lands they manage. Many of these decisions involve vegetation manipulations known as land treatments. Land treatments include activities such as removal or alteration of plant biomass, seeding burned areas, and herbicide applications. Data on these land treatments are usually stored at local offices, and gathering information across large spatial areas can be difficult. There is a need to centralize and store treatment data for Federal agencies involved in land treatments because these data are useful to land managers for policy and management and to scientists for developing sampling designs and studies. The Land Treatment Digital Library (LTDL) was created by the U.S. Geological Survey (USGS) to catalog information about land treatments on Federal lands in the western United States for all interested parties. The flexible framework of the library allows for the storage of a wide variety of data in different formats. The LTDL currently stores previously established land treatments or what often are called legacy data. The project was developed and has been refined based on feedback from partner agencies and stakeholders, with opportunity for the library holdings to expand as new information becomes available. The library contains data in text, tabular, spatial, and image formats. Specific examples include project plans and implementation reports, monitoring data, spatial data files from geographic information systems, digitized paper maps, and digital images of land treatments. The data are entered by USGS employees and are accessible through a searchable web site. The LTDL can be used to respond to information requests, conduct analyses and other forms of information syntheses, produce maps, and generate reports for DOI managers and scientists and other authorized users.

  1. Virtual screening methods as tools for drug lead discovery from large chemical libraries.

    PubMed

    Ma, X H; Zhu, F; Liu, X; Shi, Z; Zhang, J X; Yang, S Y; Wei, Y Q; Chen, Y Z

    2012-01-01

    Virtual screening methods have been developed and explored as useful tools for searching drug lead compounds from chemical libraries, including large libraries that have become publically available. In this review, we discussed the new developments in exploring virtual screening methods for enhanced performance in searching large chemical libraries, their applications in screening libraries of ~ 1 million or more compounds in the last five years, the difficulties in their applications, and the strategies for further improving these methods.

  2. Adding to the Students' Toolbox: Using Directories, Search Engines, and the Hidden Web in Search Processes.

    ERIC Educational Resources Information Center

    Mardis, Marcia A.

    2002-01-01

    Discussion of searching for information on the Web focuses on resources that are not always found by traditional Web searches. Describes sources on the hidden Web, including full-text databases, clearinghouses, digital libraries, and learning objects; explains how search engines operate; and suggests that traditional print sources are still…

  3. A protein-dependent side-chain rotamer library

    PubMed Central

    2011-01-01

    Background Protein side-chain packing problem has remained one of the key open problems in bioinformatics. The three main components of protein side-chain prediction methods are a rotamer library, an energy function and a search algorithm. Rotamer libraries summarize the existing knowledge of the experimentally determined structures quantitatively. Depending on how much contextual information is encoded, there are backbone-independent rotamer libraries and backbone-dependent rotamer libraries. Backbone-independent libraries only encode sequential information, whereas backbone-dependent libraries encode both sequential and locally structural information. However, side-chain conformations are determined by spatially local information, rather than sequentially local information. Since in the side-chain prediction problem, the backbone structure is given, spatially local information should ideally be encoded into the rotamer libraries. Methods In this paper, we propose a new type of backbone-dependent rotamer library, which encodes structural information of all the spatially neighboring residues. We call it protein-dependent rotamer libraries. Given any rotamer library and a protein backbone structure, we first model the protein structure as a Markov random field. Then the marginal distributions are estimated by the inference algorithms, without doing global optimization or search. The rotamers from the given library are then re-ranked and associated with the updated probabilities. Results Experimental results demonstrate that the proposed protein-dependent libraries significantly outperform the widely used backbone-dependent libraries in terms of the side-chain prediction accuracy and the rotamer ranking ability. Furthermore, without global optimization/search, the side-chain prediction power of the protein-dependent library is still comparable to the global-search-based side-chain prediction methods. PMID:22373394

  4. Extraction and labeling high-resolution images from PDF documents

    NASA Astrophysics Data System (ADS)

    Chachra, Suchet K.; Xue, Zhiyun; Antani, Sameer; Demner-Fushman, Dina; Thoma, George R.

    2013-12-01

    Accuracy of content-based image retrieval is affected by image resolution among other factors. Higher resolution images enable extraction of image features that more accurately represent the image content. In order to improve the relevance of search results for our biomedical image search engine, Open-I, we have developed techniques to extract and label high-resolution versions of figures from biomedical articles supplied in the PDF format. Open-I uses the open-access subset of biomedical articles from the PubMed Central repository hosted by the National Library of Medicine. Articles are available in XML and in publisher supplied PDF formats. As these PDF documents contain little or no meta-data to identify the embedded images, the task includes labeling images according to their figure number in the article after they have been successfully extracted. For this purpose we use the labeled small size images provided with the XML web version of the article. This paper describes the image extraction process and two alternative approaches to perform image labeling that measure the similarity between two images based upon the image intensity projection on the coordinate axes and similarity based upon the normalized cross-correlation between the intensities of two images. Using image identification based on image intensity projection, we were able to achieve a precision of 92.84% and a recall of 82.18% in labeling of the extracted images.

  5. Darwin on the Web: The Evolution of Search Tools.

    ERIC Educational Resources Information Center

    Vidmar, Dale J.

    1999-01-01

    Discusses various search strategies and tools that can be used for searching on the Internet, including search engines and search directories; Boolean searching; metasearching; relevancy ranking; automatic phrase detection; backlinks; natural-language searching; clustering and cataloging information; image searching; customization and portals;…

  6. Search without Boundaries Using Simple APIs

    ERIC Educational Resources Information Center

    Tong, Qi (Helen)

    2009-01-01

    The U.S. Geological Survey (USGS) Library, where the author serves as the digital services librarian, is increasingly challenged to make it easier for users to find information from many heterogeneous information sources. Information is scattered throughout different software applications (i.e., library catalog, federated search engine, link…

  7. Detection of metastatic liver tumor in multi-phase CT images by using a spherical gray-level differentiation searching filter

    NASA Astrophysics Data System (ADS)

    Zhang, Xuejun; Furukawa, Takahiro; Zhou, Xiangrong; Hara, Takeshi; Kanematsu, Masayuki; Fujita, Hiroshi

    2011-03-01

    To detect the metastatic liver tumor on CT scans, two liver edge maps on unenhanced and portal venous phase images are firstly extracted and registered using phase-only correlation (POC) method, by which rotation and shift parameters are detected on two log-polar transformed power spectrum images. Then the liver gray map is obtained on non-contrast phase images by calculating the gray value within the region of edge map. The initial tumors are derived from the subtraction of edge and gray maps as well as referring to the score from the spherical gray-level differentiation searching (SGDS) filter. Finally the FPs are eliminated by shape and texture features. 12 normal cases and 25 cases with 44 metastatic liver tumors are used to test the performance of our algorithm, 86.7% of TPs are successfully extracted by our CAD system with 2.5 FPs per case. The result demonstrates that the POC is a robust method for the liver registration, and our proposed SGDS filter is effective to detect spherical shape tumor on CT images. It is expected that our CAD system could useful for quantitative assessment of metastatic liver tumor in clinical practice.

  8. Graph Library

    SciTech Connect

    Schulz, Martin; Arnold, Dorian

    2007-06-12

    GraphLib is a support library used by other tools to create, manipulate, store, and export graphs. It provides a simple interface to specifS’ arbitrary directed and undirected graphs by adding nodes and edges. Each node and edge can be associated with a set of attributes describing size, color, and shape. Once created, graphs can be manipulated using a set of graph analysis algorithms, including merge, prune, and path coloring operations. GraphLib also has the ability to export graphs into various open formats such as DOT and GML.

  9. Cell Libraries

    NASA Technical Reports Server (NTRS)

    1994-01-01

    A NASA contract led to the development of faster and more energy efficient semiconductor materials for digital integrated circuits. Gallium arsenide (GaAs) conducts electrons 4-6 times faster than silicon and uses less power at frequencies above 100-150 megahertz. However, the material is expensive, brittle, fragile and has lacked computer automated engineering tools to solve this problem. Systems & Processes Engineering Corporation (SPEC) developed a series of GaAs cell libraries for cell layout, design rule checking, logic synthesis, placement and routing, simulation and chip assembly. The system is marketed by Compare Design Automation.

  10. Automated search for supernovae

    SciTech Connect

    Kare, J.T.

    1984-11-15

    This thesis describes the design, development, and testing of a search system for supernovae, based on the use of current computer and detector technology. This search uses a computer-controlled telescope and charge coupled device (CCD) detector to collect images of hundreds of galaxies per night of observation, and a dedicated minicomputer to process these images in real time. The system is now collecting test images of up to several hundred fields per night, with a sensitivity corresponding to a limiting magnitude (visual) of 17. At full speed and sensitivity, the search will examine some 6000 galaxies every three nights, with a limiting magnitude of 18 or fainter, yielding roughly two supernovae per week (assuming one supernova per galaxy per 50 years) at 5 to 50 percent of maximum light. An additional 500 nearby galaxies will be searched every night, to locate about 10 supernovae per year at one or two percent of maximum light, within hours of the initial explosion.

  11. Search Cloud

    MedlinePlus

    ... this page: https://medlineplus.gov/cloud.html Search Cloud To use the sharing features on this page, ... chest pa and lateral Share the MedlinePlus search cloud with your users by embedding our search cloud ...

  12. Library Directions in 1988.

    ERIC Educational Resources Information Center

    DeCandido, GraceAnne A.

    1989-01-01

    Reviews major library issues and events of 1988, including: (1) the Federal Bureau of Investigation's Library Awareness Program; (2) cooperation with USSR libraries; (3) library finance; (4) preservation; and (5) special programing. News about a number of prominent library professionals is included in a sidebar. (MES)

  13. Genealogy and Libraries.

    ERIC Educational Resources Information Center

    Carothers, Diane Foxhill; And Others

    1983-01-01

    Ten articles describe genealogical collections of the National Archives and Library of Congress, state archives programs, academic research libraries, Allen County Public Library (Indiana), Newberry Library, Church of Jesus Christ of Latter-Day Saints genealogical library, and New England Historic Genealogical Society, and approaches to Black…

  14. Marketing the Virtual Library

    ERIC Educational Resources Information Center

    Fagan, Jody Condit

    2009-01-01

    Far more people are familiar with their local public or college library facility than their library's website and online resources. In fact, according to a recent survey, 96% of Americans said they had visited a library in person, but less than one-third have visited their online library. Since everyone agrees that online library resources are…

  15. Library Handbook for Faculty.

    ERIC Educational Resources Information Center

    Martinez, Angelina, Ed.

    Discussions of library resources, services and related activities as well as library materials selection and acquisition are provided for faculty to facilitate and enhance their use of the library. Included in the library resources section are books, periodicals, microforms, and special collections and archives. Instruction in library use,…

  16. Search of the Deep and Dark Web via DARPA Memex

    NASA Astrophysics Data System (ADS)

    Mattmann, C. A.

    2015-12-01

    Search has progressed through several stages due to the increasing size of the Web. Search engines first focused on text and its rate of occurrence; then focused on the notion of link analysis and citation then on interactivity and guided search; and now on the use of social media - who we interact with, what we comment on, and who we follow (and who follows us). The next stage, referred to as "deep search," requires solutions that can bring together text, images, video, importance, interactivity, and social media to solve this challenging problem. The Apache Nutch project provides an open framework for large-scale, targeted, vertical search with capabilities to support all past and potential future search engine foci. Nutch is a flexible infrastructure allowing open access to ranking; URL selection and filtering approaches, to the link graph generated from search, and Nutch has spawned entire sub communities including Apache Hadoop and Apache Tika. It addresses many current needs with the capability to support new technologies such as image and video. On the DARPA Memex project, we are creating create specific extensions to Nutch that will directly improve its overall technological superiority for search and that will directly allow us to address complex search problems including human trafficking. We are integrating state-of-the-art algorithms developed by Kitware for IARPA Aladdin combined with work by Harvard to provide image and video understanding support allowing automatic detection of people and things and massive deployment via Nutch. We are expanding Apache Tika for scene understanding, object/person detection and classification in images/video. We are delivering an interactive and visual interface for initiating Nutch crawls. The interface uses Python technologies to expose Nutch data and to provide a domain specific language for crawls. With the Bokeh visualization library the interface we are delivering simple interactive crawl visualization and

  17. Analysis of a librarian-mediated literature search service.

    PubMed

    Friesen, Carol; Lê, Mê-Linh; Cooke, Carol; Raynard, Melissa

    2015-01-01

    Librarian-mediated literature searching is a key service provided at medical libraries. This analysis outlines ten years of data on 19,248 literature searches and describes information on the volume and frequency of search requests, time spent per search, databases used, and professional designations of the patron requestors. Combined with information on best practices for expert searching and evaluations of similar services, these findings were used to form recommendations on the improvement and standardization of a literature search service at a large health library system.

  18. A Search for Simultaneous Optical Counterparts of Gamma-Ray Bursts (LOTIS: Livermore Optical Transient Imaging System)

    NASA Technical Reports Server (NTRS)

    Park, H.-S.

    1999-01-01

    Under this grant the UC Berkeley PI, K. Hurley, joined the LOTIS collaboration. His task was to provide precise localization data on cosmic gamma-ray bursts, so that the LOTIS automated camera data could be searched more efficiently for evidence of optical emission from gamma-ray burst sources. This was accomplished. A program is now in place which automatically sends Interplanetary Network data on bursts via e-mail to H.S. Park, for every burst detected by the GRB experiment aboard the Ulysses spacecraft (for which K. Hurley is the P.I.). The data consist either of triangulation annuli (obtained when just two spacecraft observe the burst) or error boxes (when three widely separated spacecraft observe it). These define a locus of possible burst positions. The annuli intersect the large error circles of the CGRO-BATSE experiment, and reduce their areas by a factor of approximately 25 or more. The error boxes reduce the areas by factors of several hundred. This in turn reduces the area which must be searched for an optical counterpart. No such counterparts have been observed to date by the LOTIS experiment, but several interesting upper limits have been obtained.

  19. Homecoming for Library Symbol.

    ERIC Educational Resources Information Center

    Egan, Bessie

    1987-01-01

    Discusses the significance and development of the library symbol and the history of its acceptance by the American Library Association (ALA) and the Canadian Library Association (CLA). Suggestions are made for its use. (CLB)

  20. Searching for non-genetic molecular and imaging PTSD risk and resilience markers: Systematic review of literature and design of the German Armed Forces PTSD biomarker study.

    PubMed

    Schmidt, Ulrike; Willmund, Gerd-Dieter; Holsboer, Florian; Wotjak, Carsten T; Gallinat, Jürgen; Kowalski, Jens T; Zimmermann, Peter

    2015-01-01

    Biomarkers allowing the identification of individuals with an above average vulnerability or resilience for posttraumatic stress disorder (PTSD) would especially serve populations at high risk for trauma exposure like firefighters, police officers and combat soldiers. Aiming to identify the most promising putative PTSD vulnerability markers, we conducted the first systematic review on potential imaging and non-genetic molecular markers for PTSD risk and resilience. Following the PRISMA guidelines, we systematically screened the PubMed database for prospective longitudinal clinical studies and twin studies reporting on pre-trauma and post-trauma PTSD risk and resilience biomarkers. Using 25 different combinations of search terms, we retrieved 8151 articles of which we finally included and evaluated 9 imaging and 27 molecular studies. In addition, we briefly illustrate the design of the ongoing prospective German Armed Forces (Bundeswehr) PTSD biomarker study (Bw-BioPTSD) which not only aims to validate these previous findings but also to identify novel and clinically applicable molecular, psychological and imaging risk, resilience and disease markers for deployment-related psychopathology in a cohort of German soldiers who served in Afghanistan.

  1. Building a Digital Library: With Comments on Cooperative Grant Projects and the Goals of a Digital Library.

    ERIC Educational Resources Information Center

    Peterson, Elaine

    2001-01-01

    Discussion of digital libraries focuses on the development of an image database of Native Americans that would be searchable on the Web. Describes a grant from the Institute of Museum and Library Services that Montana State University used for the project and discusses collaboration between libraries, museums, and archives. (LRW)

  2. Health sciences library building projects, 1996-1997 survey.

    PubMed Central

    Bowden, V M

    1998-01-01

    Nine building projects are briefly described, including four new libraries, two renovations, and three combined renovations and additions. The libraries range in size from 657 square feet to 136,832 square feet, with seating varying from 14 to 635. Three hospital libraries and four academic health sciences libraries are described in more detail. In each case an important consideration was the provision for computer access. Two of the libraries expanded their space for historical collections. Three of the libraries added mobile shelving as a way of storing print materials while providing space for other activities. Images PMID:9549012

  3. From Sshh to Search Engine: Reference.net on the World Wide Web.

    ERIC Educational Resources Information Center

    Kresh, Diane Nester

    2001-01-01

    Describes the development of the Collaborative Digital Reference Service (CDRS) by the Library of Congress and partner libraries that provides professional reference service to users through an international digital network of libraries. Discusses the benefits of searching library collections rather than just Internet sources and considers future…

  4. Multilingual retrieval of radiology images.

    PubMed

    Kahn, Charles E

    2009-01-01

    The multilingual search engine ARRS GoldMiner Global was created to facilitate broad international access to a richly indexed collection of more than 200,000 radiologic images. Images are indexed according to key-words and medical concepts that appear in the unstructured text of their English-language image captions. GoldMiner Global exploits the Unicode standard, which allows the accurate representation of characters and ideographs from virtually any language and which supports both left-to-right and right-to-left text directions. The user interface supports queries in Arabic, Chinese, French, German, Italian, Japanese, Korean, Portuguese, Russian, or Spanish. GoldMiner Global incorporates an interface to the United States National Library of Medicine that translates queries into English-language Medical Subject Headings (MeSH) terms. The translated MeSH terms are then used to search the image index and retrieve relevant images. Explanatory text, pull-down menu choices, and navigational guides are displayed in the selected language; search results are displayed in English. GoldMiner Global is freely available on the World Wide Web.

  5. Begin: Online Database Searching Now!

    ERIC Educational Resources Information Center

    Lodish, Erica K.

    1986-01-01

    Because of the increasing importance of online databases, school library media specialists are encouraged to introduce students to online searching. Four books that would help media specialists gain a basic background are reviewed and it is noted that although they are very technical, they can be adapted to individual needs. (EM)

  6. Talent Searches.

    ERIC Educational Resources Information Center

    Silverman, Linda Kreger, Ed.

    1994-01-01

    Talent searches are discussed in this journal theme issue, with two feature articles and several recurring columns. "Talent Search: A Driving Force in Gifted Education," by Paula Olszewski-Kubilius, defines what a talent search is, how the Talent Search was developed by Dr. Julian Stanley at Johns Hopkins University in Maryland, the…

  7. A library for the twenty-first century: the Galter Health Sciences Library's renovation and expansion project.

    PubMed Central

    Shedlock, J; Ross, F

    1997-01-01

    A renovation and expansion project at the Galter Health Sciences Library of Northwestern University strikes a balance between traditional and future libraries, library ambiance and high technology, old and new. When guided by a vision of future building use, renovation projects can succeed in meeting many institutional goals as a viable alternative to new library buildings. Issues addressed include planning considerations, architectural history, library design, building features, information technology considerations, and ideal library space design when new construction is not possible. Images PMID:9160155

  8. IAS Stacking Library in IDL

    NASA Astrophysics Data System (ADS)

    Bavouzet, Nicolas; Beelen, Alexandre; Bethermin, Matthieu; Dole, Herve; Ponthieu, Nicolas

    2013-02-01

    This IDL library is designed to be used on astronomical images. Its main aim is to stack data to allow a statistical detection of faint signal, using a prior. For instance, you can stack 160um data using the positions of galaxies detected at 24um or 3.6um, or use WMAP sources to stack Planck data. It can estimate error bars using bootstrap, and it can perform photometry (aperture photometry, or PSF fitting, or other that you can plug). The IAS Stacking Library works with gnomonic projections (RA---TAN), and also with HEALPIX projection.

  9. A search for T Tauri stars in high-latitude molecular clouds. I. IRAS sources and CCD imaging

    SciTech Connect

    Magnani, L.; Caillault, J.; Armus, L. E. O. Hulburt Center for Space Research, Washington, DC Georgia Univ., Athens Maryland Univ., College Park )

    1990-07-01

    Results are reported from a search for excess H-alpha emission from point sources in 19 high-Galactic-latitude molecular clouds (two dark clouds and 17 translucent clouds). A total of 111 candidate sources from the IRAS Point Source Catalog were evaluated, but most of these (except for five T Tau stars in the dark clouds) were found to be 100-micron cirrus sources, galaxies, or field stars. CCD observations of 23 ambiguous sources were obtained in the red and H-alpha bands using a CCD detector on the 0.9-m telescope at KPNO during September 1987 and February 1988: no H-alpha/R ratios more than 5 sigma above the respective field averages were found. It is concluded that significant low-mass star formation in translucent high-latitude molecular clouds is unlikely. 30 refs.

  10. Evaluation of the MEDLARS Demand Search Service.

    ERIC Educational Resources Information Center

    Lancaster, F.W.

    A detailed analysis was made by the National Library of Medicine of the performance of the Medical Literature and Analysis System (MEDLARS) in relation to 300 actual "demand search" requests made to the systems in 1966 and 1967. The objectives of the study were : (1) to study the demand search requirements of MEDLARS users, (2) to…

  11. Developing a library systematic review service: a case study.

    PubMed

    Ludeman, Emilie; Downton, Katherine; Shipper, Andrea Goldstein; Fu, Yunting

    2015-01-01

    Systematic review searching is a standard job responsibility for many health sciences librarians. The strategies a library uses to market its expertise may affect the number of researchers requesting librarian assistance as well as how researchers perceive librarians as systematic review collaborators. This article describes how one health sciences library developed, launched, and promoted its systematic review service to researchers on campus.

  12. Harnessing the Power of SharePoint for Library Applications

    ERIC Educational Resources Information Center

    Ennis, Lisa A.; Tims, Randy S.

    2010-01-01

    Back in 2008, the authors were looking for a tool that would replace the library's Outlook folders and much of what the library had stored on shared network drives. So they were mainly looking for something that would hold their documents, allow them to better organize those documents, offer an easy way to search for those documents, and be easy…

  13. How to Survive in Industry. Cost Justifying Library Services

    ERIC Educational Resources Information Center

    Kramer, Joseph

    1971-01-01

    Two services provided by the Boeing Co. Aerospace Group Library-Literature searches and reference/publication identification activities-were evaluated by written and oral surveys of the library's users. The survey technique and cost savings reported by the two studies are discussed. (2 references) (Author/NH)

  14. Digital Libraries and Repositories in India: An Evaluative Study

    ERIC Educational Resources Information Center

    Mittal, Rekha; Mahesh, G.

    2008-01-01

    Purpose: The purpose of this research is to identify and evaluate the collections within digital libraries and repositories in India available in the public domain. Design/methodology/approach: The digital libraries and repositories were identified through a study of the literature, as well as internet searching and browsing. The resulting digital…

  15. Library Users: How They Adapt to Changing Roles.

    ERIC Educational Resources Information Center

    Miido, Helis

    Traditional library tasks, for example database searching, are increasingly performed by library users, forcing both the librarian and the user to assume at times dichotomous roles of teacher and student. Modern librarians install new software and guide organizations in multimedia applications. Librarians need to be cognizant of the human factor,…

  16. Computer-Mediated Communication in Library Credit Courses.

    ERIC Educational Resources Information Center

    Dewald, Nancy H.

    1996-01-01

    Describes two undergraduate library credit courses using computer-mediated communication. The first focuses on information searching and electronic resources in the students' areas of study. The second teaches basic research skills, the use of Netscape, and the use of e-mail and conferencing software in four areas: library studies; health…

  17. DocML: A Digital Library of University Data.

    ERIC Educational Resources Information Center

    Papadakis, Ioannis; Karakoidas, Vassileios; Chrissikopoulos, Vassileios

    2002-01-01

    Describes DocML, a Web-based digital library of university data that is used to build a system capable of preserving and managing student assignments. Topics include requirements for a digital library of university data; metadata and XML; three-tier architecture; user interface; searching; browsing; content delivery; and administrative issues.…

  18. Anxiety-Expectation Mediation Model of Library Anxiety.

    ERIC Educational Resources Information Center

    Jiao, Qun G.; Onwuegbuzie, Anthony J.

    This study presents a test of the Anxiety-Expectation Mediation (AEM) model of library anxiety. The AEM model contains variables that are directly or indirectly related to information search performance, as measured by students' scores on their research proposals. This model posits that library anxiety and self-perception serve as factors that…

  19. An Overview of the Project on the Imaging and Full-Text Retrieval of the Ava Helen and Linus Pauling Papers at the Oregon State University Libraries.

    ERIC Educational Resources Information Center

    Krishnamurthy, Ramesh S.; Mead, Clifford S.

    1995-01-01

    Presents plan of Oregon State University Libraries to convert all paper documents from the Ava Helen and Linus Pauling archives to digital format. The scope, goals, tasks and objectives set by the project coordinators are outlined, and issues such as protection of equipment, access, copyright and management are discussed. (JKP)

  20. Generation of bioactive peptides by biological libraries.

    PubMed

    Mersich, Christa; Jungbauer, Alois

    2008-01-15

    Biological libraries are powerful tools for discovery of new ligands as well as for identification of cellular interaction partners. Since the first development of the first biological libraries in form of phage displays, numerous biological libraries have been developed. For the development of new ligands, the usage of synthetic oligonucleotides is the method of choice. Generation of random oligonucleotides has been refined and various strategies for random oligonucleotide design were developed. We trace the progress and design of new strategies for the generation of random oligonucleotides, and include a look at arising diversity biases. On the other hand, genomic libraries are widely employed for investigation of cellular protein-protein interactions and targeted search of proteomic binding partners. Expression of random peptides and proteins in a linear form or integrated in a scaffold can be facilitated both in vitro and in vivo. A typical in vitro system, ribosome display, provides the largest available library size. In vivo methods comprise smaller libraries, the size of which depends on their transformation efficiency. Libraries in different hosts such as phage, bacteria, yeast, insect cells, mammalian cells exhibit higher biosynthetic capabilities. The latest library systems are compared and their strengths and limitations are reviewed.