NASA Astrophysics Data System (ADS)
Robbins, William L.; Conklin, James J.
1995-10-01
Medical images (angiography, CT, MRI, nuclear medicine, ultrasound, x ray) play an increasingly important role in the clinical development and regulatory review process for pharmaceuticals and medical devices. Since medical images are increasingly acquired and archived digitally, or are readily digitized from film, they can be visualized, processed and analyzed in a variety of ways using digital image processing and display technology. Moreover, with image-based data management and data visualization tools, medical images can be electronically organized and submitted to the U.S. Food and Drug Administration (FDA) for review. The collection, processing, analysis, archival, and submission of medical images in a digital format versus an analog (film-based) format presents both challenges and opportunities for the clinical and regulatory information management specialist. The medical imaging 'core laboratory' is an important resource for clinical trials and regulatory submissions involving medical imaging data. Use of digital imaging technology within a core laboratory can increase efficiency and decrease overall costs in the image data management and regulatory review process.
IPL Processing of the Viking Orbiter Images of Mars
NASA Technical Reports Server (NTRS)
Ruiz, R. M.; Elliott, D. A.; Yagi, G. M.; Pomphrey, R. B.; Power, M. A.; Farrell, W., Jr.; Lorre, J. J.; Benton, W. D.; Dewar, R. E.; Cullen, L. E.
1977-01-01
The Viking orbiter cameras returned over 9000 images of Mars during the 6-month nominal mission. Digital image processing was required to produce products suitable for quantitative and qualitative scientific interpretation. Processing included the production of surface elevation data using computer stereophotogrammetric techniques, crater classification based on geomorphological characteristics, and the generation of color products using multiple black-and-white images recorded through spectral filters. The Image Processing Laboratory of the Jet Propulsion Laboratory was responsible for the design, development, and application of the software required to produce these 'second-order' products.
The laboratory demonstration and signal processing of the inverse synthetic aperture imaging ladar
NASA Astrophysics Data System (ADS)
Gao, Si; Zhang, ZengHui; Xu, XianWen; Yu, WenXian
2017-10-01
This paper presents a coherent inverse synthetic-aperture imaging ladar(ISAL)system to obtain high resolution images. A balanced coherent optics system in laboratory is built with binary phase coded modulation transmit waveform which is different from conventional chirp. A whole digital signal processing solution is proposed including both quality phase gradient autofocus(QPGA) algorithm and cubic phase function(CPF) algorithm. Some high-resolution well-focused ISAL images of retro-reflecting targets are shown to validate the concepts. It is shown that high resolution images can be achieved and the influences from vibrations of platform involving targets and radar can be automatically compensated by the distinctive laboratory system and digital signal process.
Digital processing of the Mariner 10 images of Venus and Mercury
NASA Technical Reports Server (NTRS)
Soha, J. M.; Lynn, D. J.; Mosher, J. A.; Elliot, D. A.
1977-01-01
An extensive effort was devoted to the digital processing of the Mariner 10 images of Venus and Mercury at the Image Processing Laboratory of the Jet Propulsion Laboratory. This effort was designed to optimize the display of the considerable quantity of information contained in the images. Several image restoration, enhancement, and transformation procedures were applied; examples of these techniques are included. A particular task was the construction of large mosaics which characterize the surface of Mercury and the atmospheric structure of Venus.
Operation and Performance of the Mars Exploration Rover Imaging System on the Martian Surface
NASA Technical Reports Server (NTRS)
Maki, Justin N.; Litwin, Todd; Herkenhoff, Ken
2005-01-01
This slide presentation details the Mars Exploration Rover (MER) imaging system. Over 144,000 images have been gathered from all Mars Missions, with 83.5% of them being gathered by MER. Each Rover has 9 cameras (Navcam, front and rear Hazcam, Pancam, Microscopic Image, Descent Camera, Engineering Camera, Science Camera) and produces 1024 x 1024 (1 Megapixel) images in the same format. All onboard image processing code is implemented in flight software and includes extensive processing capabilities such as autoexposure, flat field correction, image orientation, thumbnail generation, subframing, and image compression. Ground image processing is done at the Jet Propulsion Laboratory's Multimission Image Processing Laboratory using Video Image Communication and Retrieval (VICAR) while stereo processing (left/right pairs) is provided for raw image, radiometric correction; solar energy maps,triangulation (Cartesian 3-spaces) and slope maps.
Complex Event Processing for Content-Based Text, Image, and Video Retrieval
2016-06-01
NY): Wiley- Interscience; 2000. Feldman R, Sanger J. The text mining handbook: advanced approaches in analyzing unstructured data. New York (NY...ARL-TR-7705 ● JUNE 2016 US Army Research Laboratory Complex Event Processing for Content-Based Text , Image, and Video Retrieval...ARL-TR-7705 ● JUNE 2016 US Army Research Laboratory Complex Event Processing for Content-Based Text , Image, and Video Retrieval
Processing of Mars Exploration Rover Imagery for Science and Operations Planning
NASA Technical Reports Server (NTRS)
Alexander, Douglass A.; Deen, Robert G.; Andres, Paul M.; Zamani, Payam; Mortensen, Helen B.; Chen, Amy C.; Cayanan, Michael K.; Hall, Jeffrey R.; Klochko, Vadim S.; Pariser, Oleg;
2006-01-01
The twin Mars Exploration Rovers (MER) delivered an unprecedented array of image sensors to the Mars surface. These cameras were essential for operations, science, and public engagement. The Multimission Image Processing Laboratory (MIPL) at the Jet Propulsion Laboratory was responsible for the first-order processing of all of the images returned by these cameras. This processing included reconstruction of the original images, systematic and ad hoc generation of a wide variety of products derived from those images, and delivery of the data to a variety of customers, within tight time constraints. A combination of automated and manual processes was developed to meet these requirements, with significant inheritance from prior missions. This paper describes the image products generated by MIPL for MER and the processes used to produce and deliver them.
NASA Astrophysics Data System (ADS)
Barber, Jeffrey; Greca, Joseph; Yam, Kevin; Weatherall, James C.; Smith, Peter R.; Smith, Barry T.
2017-05-01
In 2016, the millimeter wave (MMW) imaging community initiated the formation of a standard for millimeter wave image quality metrics. This new standard, American National Standards Institute (ANSI) N42.59, will apply to active MMW systems for security screening of humans. The Electromagnetic Signatures of Explosives Laboratory at the Transportation Security Laboratory is supporting the ANSI standards process via the creation of initial prototypes for round-robin testing with MMW imaging system manufacturers and experts. Results obtained for these prototypes will be used to inform the community and lead to consensus objective standards amongst stakeholders. Images collected with laboratory systems are presented along with results of preliminary image analysis. Future directions for object design, data collection and image processing are discussed.
NASA Technical Reports Server (NTRS)
Kumar, P.; Lin, F. Y.; Vaishampayan, V.; Farvardin, N.
1986-01-01
A complete documentation of the software developed in the Communication and Signal Processing Laboratory (CSPL) during the period of July 1985 to March 1986 is provided. Utility programs and subroutines that were developed for a user-friendly image and speech processing environment are described. Additional programs for data compression of image and speech type signals are included. Also, programs for the zero-memory and block transform quantization in the presence of channel noise are described. Finally, several routines for simulating the perfromance of image compression algorithms are included.
Quantitative Imaging in Laboratory: Fast Kinetics and Fluorescence Quenching
ERIC Educational Resources Information Center
Cumberbatch, Tanya; Hanley, Quentin S.
2007-01-01
The process of quantitative imaging, which is very commonly used in laboratory, is shown to be very useful for studying the fast kinetics and fluorescence quenching of many experiments. The imaging technique is extremely cheap and hence can be used in many absorption and luminescence experiments.
Dynamic feature analysis for Voyager at the Image Processing Laboratory
NASA Technical Reports Server (NTRS)
Yagi, G. M.; Lorre, J. J.; Jepsen, P. L.
1978-01-01
Voyager 1 and 2 were launched from Cape Kennedy to Jupiter, Saturn, and beyond on September 5, 1977 and August 20, 1977. The role of the Image Processing Laboratory is to provide the Voyager Imaging Team with the necessary support to identify atmospheric features (tiepoints) for Jupiter and Saturn data, and to analyze and display them in a suitable form. This support includes the software needed to acquire and store tiepoints, the hardware needed to interactively display images and tiepoints, and the general image processing environment necessary for decalibration and enhancement of the input images. The objective is an understanding of global circulation in the atmospheres of Jupiter and Saturn. Attention is given to the Voyager imaging subsystem, the Voyager imaging science objectives, hardware, software, display monitors, a dynamic feature study, decalibration, navigation, and data base.
Water surface capturing by image processing
USDA-ARS?s Scientific Manuscript database
An alternative means of measuring the water surface interface during laboratory experiments is processing a series of sequentially captured images. Image processing can provide a continuous, non-intrusive record of the water surface profile whose accuracy is not dependent on water depth. More trad...
Image Processing: A State-of-the-Art Way to Learn Science.
ERIC Educational Resources Information Center
Raphael, Jacqueline; Greenberg, Richard
1995-01-01
Teachers participating in the Image Processing for Teaching Process, begun at the University of Arizona's Lunar and Planetary Laboratory in 1989, find this technology ideal for encouraging student discovery, promoting constructivist science or math experiences, and adapting in classrooms. Because image processing is not a computerized text, it…
NASA Technical Reports Server (NTRS)
Vane, Gregg (Editor)
1987-01-01
The papers in this document were presented at the Imaging Spectroscopy 2 Conference of the 31st International Symposium on Optical and Optoelectronic Applied Science and Engineering, in San Diego, California, on 20 and 21 August 1987. They describe the design and performance of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) sensor and its subsystems, the ground data processing facility, laboratory calibration, and first results.
NASA Technical Reports Server (NTRS)
Matthews, Christine G.; Posenau, Mary-Anne; Leonard, Desiree M.; Avis, Elizabeth L.; Debure, Kelly R.; Stacy, Kathryn; Vonofenheim, Bill
1992-01-01
The intent is to provide an introduction to the image processing capabilities available at the Langley Research Center (LaRC) Central Scientific Computing Complex (CSCC). Various image processing software components are described. Information is given concerning the use of these components in the Data Visualization and Animation Laboratory at LaRC.
Towards an Intelligent Planning Knowledge Base Development Environment
NASA Technical Reports Server (NTRS)
Chien, S.
1994-01-01
ract describes work in developing knowledge base editing and debugging tools for the Multimission VICAR Planner (MVP) system. MVP uses artificial intelligence planning techniques to automatically construct executable complex image processing procedures (using models of the smaller constituent image processing requests made to the JPL Multimission Image Processing Laboratory.
The Multimission Image Processing Laboratory's virtual frame buffer interface
NASA Technical Reports Server (NTRS)
Wolfe, T.
1984-01-01
Large image processing systems use multiple frame buffers with differing architectures and vendor supplied interfaces. This variety of architectures and interfaces creates software development, maintenance and portability problems for application programs. Several machine-dependent graphics standards such as ANSI Core and GKS are available, but none of them are adequate for image processing. Therefore, the Multimission Image Processing laboratory project has implemented a programmer level virtual frame buffer interface. This interface makes all frame buffers appear as a generic frame buffer with a specified set of characteristics. This document defines the virtual frame uffer interface and provides information such as FORTRAN subroutine definitions, frame buffer characteristics, sample programs, etc. It is intended to be used by application programmers and system programmers who are adding new frame buffers to a system.
Cardio-PACs: a new opportunity
NASA Astrophysics Data System (ADS)
Heupler, Frederick A., Jr.; Thomas, James D.; Blume, Hartwig R.; Cecil, Robert A.; Heisler, Mary
2000-05-01
It is now possible to replace film-based image management in the cardiac catheterization laboratory with a Cardiology Picture Archiving and Communication System (Cardio-PACS) based on digital imaging technology. The first step in the conversion process is installation of a digital image acquisition system that is capable of generating high-quality DICOM-compatible images. The next three steps, which are the subject of this presentation, involve image display, distribution, and storage. Clinical requirements and associated cost considerations for these three steps are listed below: Image display: (1) Image quality equal to film, with DICOM format, lossless compression, image processing, desktop PC-based with color monitor, and physician-friendly imaging software; (2) Performance specifications include: acquire 30 frames/sec; replay 15 frames/sec; access to file server 5 seconds, and to archive 5 minutes; (3) Compatibility of image file, transmission, and processing formats; (4) Image manipulation: brightness, contrast, gray scale, zoom, biplane display, and quantification; (5) User-friendly control of image review. Image distribution: (1) Standard IP-based network between cardiac catheterization laboratories, file server, long-term archive, review stations, and remote sites; (2) Non-proprietary formats; (3) Bidirectional distribution. Image storage: (1) CD-ROM vs disk vs tape; (2) Verification of data integrity; (3) User-designated storage capacity for catheterization laboratory, file server, long-term archive. Costs: (1) Image acquisition equipment, file server, long-term archive; (2) Network infrastructure; (3) Review stations and software; (4) Maintenance and administration; (5) Future upgrades and expansion; (6) Personnel.
Applications of image processing and visualization in the evaluation of murder and assault
NASA Astrophysics Data System (ADS)
Oliver, William R.; Rosenman, Julian G.; Boxwala, Aziz; Stotts, David; Smith, John; Soltys, Mitchell; Symon, James; Cullip, Tim; Wagner, Glenn
1994-09-01
Recent advances in image processing and visualization are of increasing use in the investigation of violent crime. The Digital Image Processing Laboratory at the Armed Forces Institute of Pathology in collaboration with groups at the University of North Carolina at Chapel Hill are actively exploring visualization applications including image processing of trauma images, 3D visualization, forensic database management and telemedicine. Examples of recent applications are presented. Future directions of effort include interactive consultation and image manipulation tools for forensic data exploration.
Voyager image processing at the Image Processing Laboratory
NASA Astrophysics Data System (ADS)
Jepsen, P. L.; Mosher, J. A.; Yagi, G. M.; Avis, C. C.; Lorre, J. J.; Garneau, G. W.
1980-09-01
This paper discusses new digital processing techniques as applied to the Voyager Imaging Subsystem and devised to explore atmospheric dynamics, spectral variations, and the morphology of Jupiter, Saturn and their satellites. Radiometric and geometric decalibration processes, the modulation transfer function, and processes to determine and remove photometric properties of the atmosphere and surface of Jupiter and its satellites are examined. It is exhibited that selected images can be processed into 'approach at constant longitude' time lapse movies which are useful in observing atmospheric changes of Jupiter. Photographs are included to illustrate various image processing techniques.
Voyager image processing at the Image Processing Laboratory
NASA Technical Reports Server (NTRS)
Jepsen, P. L.; Mosher, J. A.; Yagi, G. M.; Avis, C. C.; Lorre, J. J.; Garneau, G. W.
1980-01-01
This paper discusses new digital processing techniques as applied to the Voyager Imaging Subsystem and devised to explore atmospheric dynamics, spectral variations, and the morphology of Jupiter, Saturn and their satellites. Radiometric and geometric decalibration processes, the modulation transfer function, and processes to determine and remove photometric properties of the atmosphere and surface of Jupiter and its satellites are examined. It is exhibited that selected images can be processed into 'approach at constant longitude' time lapse movies which are useful in observing atmospheric changes of Jupiter. Photographs are included to illustrate various image processing techniques.
Automated synthesis of image processing procedures using AI planning techniques
NASA Technical Reports Server (NTRS)
Chien, Steve; Mortensen, Helen
1994-01-01
This paper describes the Multimission VICAR (Video Image Communication and Retrieval) Planner (MVP) (Chien 1994) system, which uses artificial intelligence planning techniques (Iwasaki & Friedland, 1985, Pemberthy & Weld, 1992, Stefik, 1981) to automatically construct executable complex image processing procedures (using models of the smaller constituent image processing subprograms) in response to image processing requests made to the JPL Multimission Image Processing Laboratory (MIPL). The MVP system allows the user to specify the image processing requirements in terms of the various types of correction required. Given this information, MVP derives unspecified required processing steps and determines appropriate image processing programs and parameters to achieve the specified image processing goals. This information is output as an executable image processing program which can then be executed to fill the processing request.
Visual Motion Perception and Visual Attentive Processes.
1988-04-01
88-0551 Visual Motion Perception and Visual Attentive Processes George Spering , New YorkUnivesity A -cesson For DTIC TAB rant AFOSR 85-0364... Spering . HIPSt: A Unix-based image processing syslem. Computer Vision, Graphics, and Image Processing, 1984,25. 331-347. ’HIPS is the Human Information...Processing Laboratory’s Image Processing System. 1985 van Santen, Jan P. It, and George Spering . Elaborated Reichardt detectors. Journal of the Optical
Data Visualization and Animation Lab (DVAL) overview
NASA Technical Reports Server (NTRS)
Stacy, Kathy; Vonofenheim, Bill
1994-01-01
The general capabilities of the Langley Research Center Data Visualization and Animation Laboratory is described. These capabilities include digital image processing, 3-D interactive computer graphics, data visualization and analysis, video-rate acquisition and processing of video images, photo-realistic modeling and animation, video report generation, and color hardcopies. A specialized video image processing system is also discussed.
V-Sipal - a Virtual Laboratory for Satellite Image Processing and Analysis
NASA Astrophysics Data System (ADS)
Buddhiraju, K. M.; Eeti, L.; Tiwari, K. K.
2011-09-01
In this paper a virtual laboratory for the Satellite Image Processing and Analysis (v-SIPAL) being developed at the Indian Institute of Technology Bombay is described. v-SIPAL comprises a set of experiments that are normally carried out by students learning digital processing and analysis of satellite images using commercial software. Currently, the experiments that are available on the server include Image Viewer, Image Contrast Enhancement, Image Smoothing, Edge Enhancement, Principal Component Transform, Texture Analysis by Co-occurrence Matrix method, Image Indices, Color Coordinate Transforms, Fourier Analysis, Mathematical Morphology, Unsupervised Image Classification, Supervised Image Classification and Accuracy Assessment. The virtual laboratory includes a theory module for each option of every experiment, a description of the procedure to perform each experiment, the menu to choose and perform the experiment, a module on interpretation of results when performed with a given image and pre-specified options, bibliography, links to useful internet resources and user-feedback. The user can upload his/her own images for performing the experiments and can also reuse outputs of one experiment in another experiment where applicable. Some of the other experiments currently under development include georeferencing of images, data fusion, feature evaluation by divergence andJ-M distance, image compression, wavelet image analysis and change detection. Additions to the theory module include self-assessment quizzes, audio-video clips on selected concepts, and a discussion of elements of visual image interpretation. V-SIPAL is at the satge of internal evaluation within IIT Bombay and will soon be open to selected educational institutions in India for evaluation.
An Image Retrieval and Processing Expert System for the World Wide Web
NASA Technical Reports Server (NTRS)
Rodriguez, Ricardo; Rondon, Angelica; Bruno, Maria I.; Vasquez, Ramon
1998-01-01
This paper presents a system that is being developed in the Laboratory of Applied Remote Sensing and Image Processing at the University of P.R. at Mayaguez. It describes the components that constitute its architecture. The main elements are: a Data Warehouse, an Image Processing Engine, and an Expert System. Together, they provide a complete solution to researchers from different fields that make use of images in their investigations. Also, since it is available to the World Wide Web, it provides remote access and processing of images.
Image processing and products for the Magellan mission to Venus
NASA Technical Reports Server (NTRS)
Clark, Jerry; Alexander, Doug; Andres, Paul; Lewicki, Scott; Mcauley, Myche
1992-01-01
The Magellan mission to Venus is providing planetary scientists with massive amounts of new data about the surface geology of Venus. Digital image processing is an integral part of the ground data system that provides data products to the investigators. The mosaicking of synthetic aperture radar (SAR) image data from the spacecraft is being performed at JPL's Multimission Image Processing Laboratory (MIPL). MIPL hosts and supports the Image Data Processing Subsystem (IDPS), which was developed in a VAXcluster environment of hardware and software that includes optical disk jukeboxes and the TAE-VICAR (Transportable Applications Executive-Video Image Communication and Retrieval) system. The IDPS is being used by processing analysts of the Image Data Processing Team to produce the Magellan image data products. Various aspects of the image processing procedure are discussed.
Inter-laboratory comparison of the in vivo comet assay including three image analysis systems.
Plappert-Helbig, Ulla; Guérard, Melanie
2015-12-01
To compare the extent of potential inter-laboratory variability and the influence of different comet image analysis systems, in vivo comet experiments were conducted using the genotoxicants ethyl methanesulfonate and methyl methanesulfonate. Tissue samples from the same animals were processed and analyzed-including independent slide evaluation by image analysis-in two laboratories with extensive experience in performing the comet assay. The analysis revealed low inter-laboratory experimental variability. Neither the use of different image analysis systems, nor the staining procedure of DNA (propidium iodide vs. SYBR® Gold), considerably impacted the results or sensitivity of the assay. In addition, relatively high stability of the staining intensity of propidium iodide-stained slides was found in slides that were refrigerated for over 3 months. In conclusion, following a thoroughly defined protocol and standardized routine procedures ensures that the comet assay is robust and generates comparable results between different laboratories. © 2015 Wiley Periodicals, Inc.
IMAGES: An interactive image processing system
NASA Technical Reports Server (NTRS)
Jensen, J. R.
1981-01-01
The IMAGES interactive image processing system was created specifically for undergraduate remote sensing education in geography. The system is interactive, relatively inexpensive to operate, almost hardware independent, and responsive to numerous users at one time in a time-sharing mode. Most important, it provides a medium whereby theoretical remote sensing principles discussed in lecture may be reinforced in laboratory as students perform computer-assisted image processing. In addition to its use in academic and short course environments, the system has also been used extensively to conduct basic image processing research. The flow of information through the system is discussed including an overview of the programs.
Causes of cine image quality deterioration in cardiac catheterization laboratories.
Levin, D C; Dunham, L R; Stueve, R
1983-10-01
Deterioration of cineangiographic image quality can result from malfunctions or technical errors at a number of points along the cine imaging chain: generator and automatic brightness control, x-ray tube, x-ray beam geometry, image intensifier, optics, cine camera, cine film, film processing, and cine projector. Such malfunctions or errors can result in loss of image contrast, loss of spatial resolution, improper control of film optical density (brightness), or some combination thereof. While the electronic and photographic technology involved is complex, physicians who perform cardiac catheterization should be conversant with the problems and what can be done to solve them. Catheterization laboratory personnel have control over a number of factors that directly affect image quality, including radiation dose rate per cine frame, kilovoltage or pulse width (depending on type of automatic brightness control), cine run time, selection of small or large focal spot, proper object-intensifier distance and beam collimation, aperture of the cine camera lens, selection of cine film, processing temperature, processing immersion time, and selection of developer.
NASA Technical Reports Server (NTRS)
1983-01-01
The approach pictures taken by the Viking 1 and Viking 2 spacecrafts two days before their Mars orbital insertion maneuvers were analyzed in order to search for new satellites within the orbit of Phobos. To accomplish this task, search procedure and analysis strategy were formulated, developed and executed using the substantial image processing capabilities of the Image Processing Laboratory at the Jet Propulsion Laboratory. The development of these new search capabilities should prove to be valuable to NASA in processing of image data obtained from other spacecraft missions. The result of applying the search procedures to the Viking approach pictures was as follows: no new satellites of comparable size (approx. 20 km) and brightness to Phobos or Demios were detected within the orbit of Phobos.
Remote Sensing Image Quality Assessment Experiment with Post-Processing
NASA Astrophysics Data System (ADS)
Jiang, W.; Chen, S.; Wang, X.; Huang, Q.; Shi, H.; Man, Y.
2018-04-01
This paper briefly describes the post-processing influence assessment experiment, the experiment includes three steps: the physical simulation, image processing, and image quality assessment. The physical simulation models sampled imaging system in laboratory, the imaging system parameters are tested, the digital image serving as image processing input are produced by this imaging system with the same imaging system parameters. The gathered optical sampled images with the tested imaging parameters are processed by 3 digital image processes, including calibration pre-processing, lossy compression with different compression ratio and image post-processing with different core. Image quality assessment method used is just noticeable difference (JND) subject assessment based on ISO20462, through subject assessment of the gathered and processing images, the influence of different imaging parameters and post-processing to image quality can be found. The six JND subject assessment experimental data can be validated each other. Main conclusions include: image post-processing can improve image quality; image post-processing can improve image quality even with lossy compression, image quality with higher compression ratio improves less than lower ratio; with our image post-processing method, image quality is better, when camera MTF being within a small range.
Popescu, Bogdan A; Stefanidis, Alexandros; Nihoyannopoulos, Petros; Fox, Kevin F; Ray, Simon; Cardim, Nuno; Rigo, Fausto; Badano, Luigi P; Fraser, Alan G; Pinto, Fausto; Zamorano, Jose Luis; Habib, Gilbert; Maurer, Gerald; Lancellotti, Patrizio; Andrade, Maria Joao; Donal, Erwan; Edvardsen, Thor; Varga, Albert
2014-07-01
Standards for echocardiographic laboratories were proposed by the European Association of Echocardiography (now the European Association of Cardiovascular Imaging) 7 years ago in order to raise standards of practice and improve the quality of care. Criteria and requirements were published at that time for transthoracic, transoesophageal, and stress echocardiography. This paper reassesses and updates the quality standards to take account of experience and the technical developments of modern echocardiographic practice. It also discusses quality control, the incentives for laboratories to apply for accreditation, the reaccreditation criteria, and the current status and future prospects of the laboratory accreditation process. Published on behalf of the European Society of Cardiology. All rights reserved. © The Author 2014. For permissions please email: journals.permissions@oup.com.
Application of Structure-from-Motion photogrammetry in laboratory flumes
NASA Astrophysics Data System (ADS)
Morgan, Jacob A.; Brogan, Daniel J.; Nelson, Peter A.
2017-01-01
Structure-from-Motion (SfM) photogrammetry has become widely used for topographic data collection in field and laboratory studies. However, the relative performance of SfM against other methods of topographic measurement in a laboratory flume environment has not been systematically evaluated, and there is a general lack of guidelines for SfM application in flume settings. As the use of SfM in laboratory flume settings becomes more widespread, it is increasingly critical to develop an understanding of how to acquire and process SfM data for a given flume size and sediment characteristics. In this study, we: (1) compare the resolution and accuracy of SfM topographic measurements to terrestrial laser scanning (TLS) measurements in laboratory flumes of varying physical dimensions containing sediments of varying grain sizes; (2) explore the effects of different image acquisition protocols and data processing methods on the resolution and accuracy of topographic data derived from SfM techniques; and (3) provide general guidance for image acquisition and processing for SfM applications in laboratory flumes. To investigate the effects of flume size, sediment size, and photo overlap on the density and accuracy of SfM data, we collected topographic data using both TLS and SfM in five flumes with widths ranging from 0.22 to 6.71 m, lengths ranging from 9.14 to 30.48 m, and median sediment sizes ranging from 0.2 to 31 mm. Acquisition time, image overlap, point density, elevation data, and computed roughness parameters were compared to evaluate the performance of SfM against TLS. We also collected images of a pan of gravel where we varied the distance and angle between the camera and sediment in order to explore how photo acquisition affects the ability to capture grain-scale microtopographic features in SfM-derived point clouds. A variety of image combinations and SfM software package settings were also investigated to determine optimal processing techniques. Results from this study suggest that SfM provides topographic data of similar accuracy to TLS, at higher resolution and lower cost. We found that about 100pixels per grain are required to resolve grain-scale topography. We suggest protocols for image acquisition and SfM software settings to achieve best results when using SfM in laboratory settings. In general, convergent imagery, taken from a higher angle, with at least several overlapping images for each desired point in the flume will result in an acceptable point cloud.
Image processing and analysis of Saturn's rings
NASA Technical Reports Server (NTRS)
Yagi, G. M.; Jepsen, P. L.; Garneau, G. W.; Mosher, J. A.; Doyle, L. R.; Lorre, J. J.; Avis, C. C.; Korsmo, E. P.
1981-01-01
Processing of Voyager image data of Saturn's rings at JPL's Image Processing Laboratory is described. A software system to navigate the flight images, facilitate feature tracking, and to project the rings has been developed. This system has been used to make measurements of ring radii and to measure the velocities of the spoke features in the B-Ring. A projected ring movie to study the development of these spoke features has been generated. Finally, processing to facilitate comparison of the photometric properties of Saturn's rings at various phase angles is described.
Photo-reconnaissance applications of computer processing of images.
NASA Technical Reports Server (NTRS)
Billingsley, F. C.
1972-01-01
Discussion of imaging processing techniques for enhancement and calibration of Jet Propulsion Laboratory imaging experiment pictures returned from NASA space vehicles such as Ranger, Mariner and Surveyor. Particular attention is given to data transmission, resolution vs recognition, and color aspects of digital data processing. The effectiveness of these techniques in applications to images from a wide variety of sources is noted. It is anticipated that the use of computer processing for enhancement of imagery will increase with the improvement and cost reduction of these techniques in the future.
NASA Technical Reports Server (NTRS)
1986-01-01
Mallinckrodt Institute of Radiology (MIR) is using a digital image processing system which employs NASA-developed technology. MIR's computer system is the largest radiology system in the world. It is used in diagnostic imaging. Blood vessels are injected with x-ray dye, and the images which are produced indicate whether arteries are hardened or blocked. A computer program developed by Jet Propulsion Laboratory known as Mini-VICAR/IBIS was supplied to MIR by COSMIC. The program provides the basis for developing the computer imaging routines for data processing, contrast enhancement and picture display.
Development of a Hampton University Program for Novel Breast Cancer Imaging and Therapy Research
2013-04-01
intracavitary brachytherapy procedures during laboratory pre-clinical imaging and dosimetry equipment testing, calibration and data processing, in collaboration... electronics and detector instrumentation development; 4) breast phantom construction and implantation; 5) laboratory pre-clinical device testing...such as the ionization chamber, diode, radiographic verification 6 films and thermoluminescent dosimeters ( TLD ) but the scintillator fiber detectors
NASA Technical Reports Server (NTRS)
1991-01-01
The MD Image System, a true-color image processing system that serves as a diagnostic aid and tool for storage and distribution of images, was developed by Medical Image Management Systems, Huntsville, AL, as a "spinoff from a spinoff." The original spinoff, Geostar 8800, developed by Crystal Image Technologies, Huntsville, incorporates advanced UNIX versions of ELAS (developed by NASA's Earth Resources Laboratory for analysis of Landsat images) for general purpose image processing. The MD Image System is an application of this technology to a medical system that aids in the diagnosis of cancer, and can accept, store and analyze images from other sources such as Magnetic Resonance Imaging.
Kocna, P
1995-01-01
GastroBase, a clinical information system, incorporates patient identification, medical records, images, laboratory data, patient history, physical examination, and other patient-related information. Program modules are written in C; all data is processed using Novell-Btrieve data manager. Patient identification database represents the main core of this information systems. A graphic library developed in the past year and graphic modules with a special video-card enables the storing, archiving, and linking of different images to the electronic patient-medical-record. GastroBase has been running for more than four years in daily routine and the database contains more than 25,000 medical records and 1,500 images. This new version of GastroBase is now incorporated into the clinical information system of University Clinic in Prague.
NASA Technical Reports Server (NTRS)
1997-01-01
In 1990, Lewis Research Center jointly sponsored a conference with the U.S. Air Force Wright Laboratory focused on high speed imaging. This conference, and early funding by Lewis Research Center, helped to spur work by Silicon Mountain Design, Inc. to break the performance barriers of imaging speed, resolution, and sensitivity through innovative technology. Later, under a Small Business Innovation Research contract with the Jet Propulsion Laboratory, the company designed a real-time image enhancing camera that yields superb, high quality images in 1/30th of a second while limiting distortion. The result is a rapidly available, enhanced image showing significantly greater detail compared to image processing executed on digital computers. Current applications include radiographic and pathology-based medicine, industrial imaging, x-ray inspection devices, and automated semiconductor inspection equipment.
Reduce Fluid Experiment System: Flight data from the IML-1 Mission
NASA Technical Reports Server (NTRS)
Workman, Gary L.; Harper, Sabrina
1995-01-01
Processing and data reduction of holographic images from the International Microgravity Laboratory 1 (IML-1) presents some interesting challenges in determining the effects of microgravity on crystal growth processes. Use of several processing techniques, including the Computerized Holographic Image Processing System and the Software Development Package (SDP-151) will provide fundamental information for holographic and schlieren analysis of the space flight data.
Laser speckle-imaging of blood microcirculation in the brain cortex of laboratory rats in stress
DOE Office of Scientific and Technical Information (OSTI.GOV)
Vilensky, M A; Semyachkina-Glushkovskaya, Oxana V; Timoshina, P A
2012-06-30
The results of experimental approbation of the method of laser full-field speckle-imaging for monitoring the changes in blood microcirculation state of the brain cortex of laboratory rats under the conditions of developing stroke and administration of vasodilating and vasoconstrictive agents are presented. The studies aimed at the choice of the optimal conditions of speckle-image formation and recording were performed and the software implementing an adaptive algorithm for processing the data of measurements was created. The transfer of laser radiation to the probed region of the biotissue was implemented by means of a silica-polymer optical fibre. The problems and prospects ofmore » speckle-imaging of cerebral microcirculation of blood in laboratory and clinical conditions are discussed.« less
1998-12-05
This view of Jupiter was taken by Voyager 1. This image was taken through color filters and recombined to produce the color image. This photo was assembled from three black and white negatives by the Image Processing Lab at Jet Propulsion Laboratory. http://photojournal.jpl.nasa.gov/catalog/PIA01384
Detection of fuze defects by image-processing methods
DOE Office of Scientific and Technical Information (OSTI.GOV)
Chung, M.J.
1988-03-01
This paper describes experimental studies of the detection of mechanical defects by the application of computer-processing methods to real-time radiographic images of fuze assemblies. The experimental results confirm that a new algorithm developed at Materials Research Laboratory has potential for the automatic inspection of these assemblies and of others that contain discrete components. The algorithm was applied to images that contain a range of grey levels and has been found to be tolerant to image variations encountered under simulated production conditions.
Applications of digital image processing techniques to problems of data registration and correlation
NASA Technical Reports Server (NTRS)
Green, W. B.
1978-01-01
An overview is presented of the evolution of the computer configuration at JPL's Image Processing Laboratory (IPL). The development of techniques for the geometric transformation of digital imagery is discussed and consideration is given to automated and semiautomated image registration, and the registration of imaging and nonimaging data. The increasing complexity of image processing tasks at IPL is illustrated with examples of various applications from the planetary program and earth resources activities. It is noted that the registration of existing geocoded data bases with Landsat imagery will continue to be important if the Landsat data is to be of genuine use to the user community.
NASA Technical Reports Server (NTRS)
1986-01-01
Digital Imaging is the computer processed numerical representation of physical images. Enhancement of images results in easier interpretation. Quantitative digital image analysis by Perceptive Scientific Instruments, locates objects within an image and measures them to extract quantitative information. Applications are CAT scanners, radiography, microscopy in medicine as well as various industrial and manufacturing uses. The PSICOM 327 performs all digital image analysis functions. It is based on Jet Propulsion Laboratory technology, is accurate and cost efficient.
NASA Technical Reports Server (NTRS)
1999-01-01
This narrow angle image taken by Cassini's camera system of the Moon is one of the best of a sequence of narrow angle frames taken as the spacecraft passed by the Moon on the way to its closest approach with Earth on August 17, 1999. The 80 millisecond exposure was taken through a spectral filter centered at 0.33 microns; the filter bandpass was 85 Angstroms wide. The spatial scale of the image is about 1.4 miles per pixel (about 2.3 kilometers). The imaging data were processed and released by the Cassini Imaging Central Laboratory for Operations (CICLOPS) at the University of Arizona's Lunar and Planetary Laboratory, Tucson, AZ. Photo Credit: NASA/JPL/Cassini Imaging Team/University of Arizona Cassini, launched in 1997, is a joint mission of NASA, the European Space Agency and Italian Space Agency. The mission is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Space Science, Washington DC. JPL is a division of the California Institute of Technology, Pasadena, CA.Digital processing of Mariner 9 television data.
NASA Technical Reports Server (NTRS)
Green, W. B.; Seidman, J. B.
1973-01-01
The digital image processing performed by the Image Processing Laboratory (IPL) at JPL in support of the Mariner 9 mission is summarized. The support is divided into the general categories of image decalibration (the removal of photometric and geometric distortions from returned imagery), computer cartographic projections in support of mapping activities, and adaptive experimenter support (flexible support to provide qualitative digital enhancements and quantitative data reduction of returned imagery). Among the tasks performed were the production of maximum discriminability versions of several hundred frames to support generation of a geodetic control net for Mars, and special enhancements supporting analysis of Phobos and Deimos images.
Voyager 2 Movie of Saturn's Moon: Phoebe
NASA Technical Reports Server (NTRS)
2000-01-01
Voyager 2 took this photo sequence of Saturn's outer satellite, Phoebe, on Sept. 4, 1981, from 2.2 million kilometers (1.36 million miles) away. The top image is the normal version and the bottom is an enhanced version to increase resolution. This sequence lasts 23.4 hours and contains 35 images. The early images were taken about 43 minutes apart, while the later ones are about 29 minutes apart. There are two significant gaps in the sequence: images 7 and 8 are separated by 2.3 hours and images 19 and 20 are separated by 2.8 hours.
Because the sunlight is coming from the left, mountains and ridges can best be seen as they reflect the sunlight near the terminator (right side of Phoebe). Other intrinsically bright spots can be seen rotating across the whole disk. In this time-lapse sequence, Phoebe appears to be a lumpy spheroid with possible large mountains sometimes showing on the limb (left side of Phoebe). The photos show that Phoebe is about 220 kilometers (132 miles) in diameter. Its rotation period (length of day) was determined from this set of images to be 9.4 hours (see Thomas, P., et al, 'Phoebe: Voyager 2 Observations', Journal of Geophysical Research, vol. 88, p. 8736, 1 November 1983).These images were processed by the Multimission Image Processing Laboratory of the Jet Propulsion Laboratory. The Voyager Project is managed for NASA by the Jet Propulsion Laboratory.Applications of a digital darkroom in the forensic laboratory
NASA Astrophysics Data System (ADS)
Bullard, Barry D.; Birge, Brian
1997-02-01
Through a joint agreement with the Indiana-Marion County Forensic Laboratory Services Agency, the Institute for Forensic Imaging conducted a pilot program to investigate crime lab applications of a digital darkroom. IFI installed and staffed a state-of-the-art digital darkroom in the photography laboratory of the Indianapolis-Marion County crime lab located at Indianapolis, Indiana. The darkroom consisted of several high resolution color digital cameras, image processing computer, dye sublimation continuous tone digital printers, and CD-ROM writer. This paper describes the use of the digital darkroom in several crime lab investigations conducted during the program.
Digital enhancement of X-rays for NDT
NASA Technical Reports Server (NTRS)
Butterfield, R. L.
1980-01-01
Report is "cookbook" for digital processing of industrial X-rays. Computer techniques, previously used primarily in laboratory and developmental research, have been outlined and codified into step by step procedures for enhancing X-ray images. Those involved in nondestructive testing should find report valuable asset, particularly is visual inspection is method currently used to process X-ray images.
Proceedings of the Augmented VIsual Display (AVID) Research Workshop
NASA Technical Reports Server (NTRS)
Kaiser, Mary K. (Editor); Sweet, Barbara T. (Editor)
1993-01-01
The papers, abstracts, and presentations were presented at a three day workshop focused on sensor modeling and simulation, and image enhancement, processing, and fusion. The technical sessions emphasized how sensor technology can be used to create visual imagery adequate for aircraft control and operations. Participants from industry, government, and academic laboratories contributed to panels on Sensor Systems, Sensor Modeling, Sensor Fusion, Image Processing (Computer and Human Vision), and Image Evaluation and Metrics.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Goodenough, D; Olafsdottir, H; Olafsson, I
Purpose: To automatically quantify the amount of missing tissue in a digital breast tomosynthesis system using four stair-stepped chest wall missing tissue gauges in the Tomophan™ from the Phantom Laboratory and image processing from Image Owl. Methods: The Tomophan™ phantom incorporates four stair-stepped missing tissue gauges by the chest wall, allowing measurement of missing chest wall in two different locations along the chest wall at two different heights. Each of the four gauges has 12 steps in 0.5 mm increments rising from the chest wall. An image processing algorithm was developed by Image Owl that first finds the two slicesmore » containing the steps then finds the signal through the highest step in all four gauges. Using the signal drop at the beginning of each gauge the distance to the end of the image gives the length of the missing tissue gauge in millimeters. Results: The Tomophan™ was imaged in digital breast tomosynthesis (DBT) systems from various vendors resulting in 46 cases used for testing. The results showed that on average 1.9 mm of 6 mm of the gauges are visible. A small focus group was asked to count the number of visible steps for each case which resulted in a good agreement between observer counts and computed data. Conclusion: First, the results indicate that the amount of missing chest wall can differ between vendors. Secondly it was shown that an automated method to estimate the amount of missing chest wall gauges agreed well with observer assessments. This finding indicates that consistency testing may be simplified using the Tomophan™ phantom and analysis by an automated image processing named Tomo QA. In general the reason for missing chest wall may be due to a function of the beam profile at the chest wall as DBT projects through the angular sampling. Research supported by Image Owl, Inc., The Phantom Laboratory, Inc. and Raforninn ehf; Mallozzi and Healy employed by The Phantom Laboratory, Inc.; Goodenough is a consultant to The Phantom Laboratory, Inc.; Fredriksson, Kristbjornsson, Olafsson, Oskarsdottir and Olafsdottir are employed by Raforninn, Ehf.« less
Enhancements to the Image Analysis Tool for Core Punch Experiments and Simulations (vs. 2014)
DOE Office of Scientific and Technical Information (OSTI.GOV)
Hogden, John Edward; Unal, Cetin
A previous paper (Hogden & Unal, 2012, Image Analysis Tool for Core Punch Experiments and Simulations) described an image processing computer program developed at Los Alamos National Laboratory. This program has proven useful so developement has been continued. In this paper we describe enhacements to the program as of 2014.
End-to-end remote sensing at the Science and Technology Laboratory of John C. Stennis Space Center
NASA Technical Reports Server (NTRS)
Kelly, Patrick; Rickman, Douglas; Smith, Eric
1991-01-01
The Science and Technology Laboratory (STL) of Stennis Space Center (SSC) was developing an expertise in remote sensing for more than a decade. Capabilities at SSC/STL include all major areas of the field. STL includes the Sensor Development Laboratory (SDL), Image Processing Center, a Learjet 23 flight platform, and on-staff scientific investigators.
Radar image enhancement and simulation as an aid to interpretation and training
NASA Technical Reports Server (NTRS)
Frost, V. S.; Stiles, J. A.; Holtzman, J. C.; Dellwig, L. F.; Held, D. N.
1980-01-01
Greatly increased activity in the field of radar image applications in the coming years demands that techniques of radar image analysis, enhancement, and simulation be developed now. Since the statistical nature of radar imagery differs from that of photographic imagery, one finds that the required digital image processing algorithms (e.g., for improved viewing and feature extraction) differ from those currently existing. This paper addresses these problems and discusses work at the Remote Sensing Laboratory in image simulation and processing, especially for systems comparable to the formerly operational SEASAT synthetic aperture radar.
ERIC Educational Resources Information Center
Huck-Iriart, Cristia´n; De-Candia, Ariel; Rodriguez, Javier; Rinaldi, Carlos
2016-01-01
In this work, we described an image processing procedure for the measurement of surface tension of the air-liquid interface using isothermal capillary action. The experiment, designed for an undergraduate course, is based on the analysis of a series of solutions with diverse surfactant concentrations at different ionic strengths. The objective of…
Documentation of operational protocol for the use of MAMA software
DOE Office of Scientific and Technical Information (OSTI.GOV)
Schwartz, Daniel S.
2016-01-21
Image analysis of Scanning Electron Microscope (SEM) micrographs is a complex process that can vary significantly between analysts. The factors causing the variation are numerous, and the purpose of Task 2b is to develop and test a set of protocols designed to minimize variation in image analysis between different analysts and laboratories, specifically using the MAMA software package, Version 2.1. The protocols were designed to be “minimally invasive”, so that expert SEM operators will not be overly constrained in the way they analyze particle samples. The protocols will be tested using a round-robin approach where results from expert SEM usersmore » at Los Alamos National Laboratory, Lawrence Livermore National Laboratory, Pacific Northwest National Laboratory, Savannah River National Laboratory, and the National Institute of Standards and Testing will be compared. The variation of the results will be used to quantify uncertainty in the particle image analysis process. The round-robin exercise will proceed with 3 levels of rigor, each with their own set of protocols, as described below in Tasks 2b.1, 2b.2, and 2b.3. The uncertainty will be developed using NIST standard reference material SRM 1984 “Thermal Spray Powder – Particle Size Distribution, Tungsten Carbide/Cobalt (Acicular)” [Reference 1]. Full details are available in the Certificate of Analysis, posted on the NIST website (http://www.nist.gov/srm/).« less
This view of Jupiter was taken by Voyager 1
NASA Technical Reports Server (NTRS)
1998-01-01
This view of Jupiter was taken by Voyager 1. This image was taken through color filters and recombined to produce the color image. This photo was assembled from three black and white negatives by the Image Processing Lab at Jet Propulsion Laboratory. JPL manages and controls the VOyager project for NASA's Office of Space Science.
NASA Technical Reports Server (NTRS)
Traub, W. A.
1984-01-01
The first physical demonstration of the principle of image reconstruction using a set of images from a diffraction-blurred elongated aperture is reported. This is an optical validation of previous theoretical and numerical simulations of the COSMIC telescope array (coherent optical system of modular imaging collectors). The present experiment utilizes 17 diffraction blurred exposures of a laboratory light source, as imaged by a lens covered by a narrow-slit aperture; the aperture is rotated 10 degrees between each exposure. The images are recorded in digitized form by a CCD camera, Fourier transformed, numerically filtered, and added; the sum is then filtered and inverse Fourier transformed to form the final image. The image reconstruction process is found to be stable with respect to uncertainties in values of all physical parameters such as effective wavelength, rotation angle, pointing jitter, and aperture shape. Future experiments will explore the effects of low counting rates, autoguiding on the image, various aperture configurations, and separated optics.
Global view of Venus from Magellan, Pioneer, and Venera data
1991-10-29
This global view of Venus, centered at 270 degrees east longitude, is a compilation of data from several sources. Magellan synthetic aperature radar mosaics from the first cycle of Magellan mapping are mapped onto a computer-simulated globe to create the image. Data gaps are filled with Pioneer-Venus orbiter data, or a constant mid-range value. Simulated color is used to enhance small-scale structure. The simulated hues are based on color images recorded by the Soviet Venera 13 and 14 spacecraft. The image was produced at the Jet Propulsion Laboratory (JPL) Multimission Image Processing Laboratory and is a single frame from a video released at the JPL news conference, 10-29-91. View provided by JPL with alternate number P-39225 MGN81.
NASA Technical Reports Server (NTRS)
Davis, V. Leon; Nordeen, Ross
1988-01-01
A laboratory for developing robotics technology for hazardous and repetitive Shuttle and payload processing activities is discussed. An overview of the computer hardware and software responsible for integrating the laboratory systems is given. The center's anthropomorphic robot is placed on a track allowing it to be moved to different stations. Various aspects of the laboratory equipment are described, including industrial robot arm control, smart systems integration, the supervisory computer, programmable process controller, real-time tracking controller, image processing hardware, and control display graphics. Topics of research include: automated loading and unloading of hypergolics for space vehicles and payloads; the use of mobile robotics for security, fire fighting, and hazardous spill operations; nondestructive testing for SRB joint and seal verification; Shuttle Orbiter radiator damage inspection; and Orbiter contour measurements. The possibility of expanding the laboratory in the future is examined.
NASA Technical Reports Server (NTRS)
1998-01-01
Perceptive Scientific Instruments, Inc., provides the foundation for the Powergene line of chromosome analysis and molecular genetic instrumentation. This product employs image processing technology from NASA's Jet Propulsion Laboratory and image enhancement techniques from Johnson Space Center. Originally developed to send pictures back to earth from space probes, digital imaging techniques have been developed and refined for use in a variety of medical applications, including diagnosis of disease.
Ober, Christopher P
Second-year veterinary students are often challenged by concepts in veterinary radiology, including the fundamentals of image quality and generation of differential lists. Four card games were developed to provide veterinary students with a supplemental means of learning about radiographic image quality and differential diagnoses in urogenital imaging. Students played these games and completed assessments of their subject knowledge before and after playing. The hypothesis was that playing each game would improve students' understanding of the topic area. For each game, students who played the game performed better on the post-test than students who did not play that game (all p<.01). For three of the four games, students who played each respective game demonstrated significant improvement in scores between the pre-test and the post-test (p<.002). The majority of students expressed that the games were both helpful and enjoyable. Educationally focused games can help students learn classroom and laboratory material. However, game design is important, as the game using the most passive learning process also demonstrated the weakest results. In addition, based on participants' comments, the games were very useful in improving student engagement in the learning process. Thus, use of games in the classroom and laboratory setting seems to benefit the learning process.
Adaptive Filtering in the Wavelet Transform Domain Via Genetic Algorithms
2004-08-01
inverse transform process. 2. BACKGROUND The image processing research conducted at the AFRL/IFTA Reconfigurable Computing Laboratory has been...coefficients from the wavelet domain back into the original signal domain. In other words, the inverse transform produces the original signal x(t) from the...coefficients for an inverse wavelet transform, such that the MSE of images reconstructed by this inverse transform is significantly less than the mean squared
A semi-automated image analysis procedure for in situ plankton imaging systems.
Bi, Hongsheng; Guo, Zhenhua; Benfield, Mark C; Fan, Chunlei; Ford, Michael; Shahrestani, Suzan; Sieracki, Jeffery M
2015-01-01
Plankton imaging systems are capable of providing fine-scale observations that enhance our understanding of key physical and biological processes. However, processing the large volumes of data collected by imaging systems remains a major obstacle for their employment, and existing approaches are designed either for images acquired under laboratory controlled conditions or within clear waters. In the present study, we developed a semi-automated approach to analyze plankton taxa from images acquired by the ZOOplankton VISualization (ZOOVIS) system within turbid estuarine waters, in Chesapeake Bay. When compared to images under laboratory controlled conditions or clear waters, images from highly turbid waters are often of relatively low quality and more variable, due to the large amount of objects and nonlinear illumination within each image. We first customized a segmentation procedure to locate objects within each image and extracted them for classification. A maximally stable extremal regions algorithm was applied to segment large gelatinous zooplankton and an adaptive threshold approach was developed to segment small organisms, such as copepods. Unlike the existing approaches for images acquired from laboratory, controlled conditions or clear waters, the target objects are often the majority class, and the classification can be treated as a multi-class classification problem. We customized a two-level hierarchical classification procedure using support vector machines to classify the target objects (< 5%), and remove the non-target objects (> 95%). First, histograms of oriented gradients feature descriptors were constructed for the segmented objects. In the first step all non-target and target objects were classified into different groups: arrow-like, copepod-like, and gelatinous zooplankton. Each object was passed to a group-specific classifier to remove most non-target objects. After the object was classified, an expert or non-expert then manually removed the non-target objects that could not be removed by the procedure. The procedure was tested on 89,419 images collected in Chesapeake Bay, and results were consistent with visual counts with >80% accuracy for all three groups.
A Semi-Automated Image Analysis Procedure for In Situ Plankton Imaging Systems
Bi, Hongsheng; Guo, Zhenhua; Benfield, Mark C.; Fan, Chunlei; Ford, Michael; Shahrestani, Suzan; Sieracki, Jeffery M.
2015-01-01
Plankton imaging systems are capable of providing fine-scale observations that enhance our understanding of key physical and biological processes. However, processing the large volumes of data collected by imaging systems remains a major obstacle for their employment, and existing approaches are designed either for images acquired under laboratory controlled conditions or within clear waters. In the present study, we developed a semi-automated approach to analyze plankton taxa from images acquired by the ZOOplankton VISualization (ZOOVIS) system within turbid estuarine waters, in Chesapeake Bay. When compared to images under laboratory controlled conditions or clear waters, images from highly turbid waters are often of relatively low quality and more variable, due to the large amount of objects and nonlinear illumination within each image. We first customized a segmentation procedure to locate objects within each image and extracted them for classification. A maximally stable extremal regions algorithm was applied to segment large gelatinous zooplankton and an adaptive threshold approach was developed to segment small organisms, such as copepods. Unlike the existing approaches for images acquired from laboratory, controlled conditions or clear waters, the target objects are often the majority class, and the classification can be treated as a multi-class classification problem. We customized a two-level hierarchical classification procedure using support vector machines to classify the target objects (< 5%), and remove the non-target objects (> 95%). First, histograms of oriented gradients feature descriptors were constructed for the segmented objects. In the first step all non-target and target objects were classified into different groups: arrow-like, copepod-like, and gelatinous zooplankton. Each object was passed to a group-specific classifier to remove most non-target objects. After the object was classified, an expert or non-expert then manually removed the non-target objects that could not be removed by the procedure. The procedure was tested on 89,419 images collected in Chesapeake Bay, and results were consistent with visual counts with >80% accuracy for all three groups. PMID:26010260
NASA Astrophysics Data System (ADS)
Lin, Qingyang; Andrew, Matthew; Thompson, William; Blunt, Martin J.; Bijeljic, Branko
2018-05-01
Non-invasive laboratory-based X-ray microtomography has been widely applied in many industrial and research disciplines. However, the main barrier to the use of laboratory systems compared to a synchrotron beamline is its much longer image acquisition time (hours per scan compared to seconds to minutes at a synchrotron), which results in limited application for dynamic in situ processes. Therefore, the majority of existing laboratory X-ray microtomography is limited to static imaging; relatively fast imaging (tens of minutes per scan) can only be achieved by sacrificing imaging quality, e.g. reducing exposure time or number of projections. To alleviate this barrier, we introduce an optimized implementation of a well-known iterative reconstruction algorithm that allows users to reconstruct tomographic images with reasonable image quality, but requires lower X-ray signal counts and fewer projections than conventional methods. Quantitative analysis and comparison between the iterative and the conventional filtered back-projection reconstruction algorithm was performed using a sandstone rock sample with and without liquid phases in the pore space. Overall, by implementing the iterative reconstruction algorithm, the required image acquisition time for samples such as this, with sparse object structure, can be reduced by a factor of up to 4 without measurable loss of sharpness or signal to noise ratio.
The influence of pets on infants' processing of cat and dog images.
Hurley, Karinna B; Kovack-Lesh, Kristine A; Oakes, Lisa M
2010-12-01
We examined how experience at home with pets is related to infants' processing of animal stimuli in a standard laboratory procedure. We presented 6-month-old infants with photographs of cats or dogs and found that infants with pets at home (N=40) responded differently to the pictures than infants without pets (N=40). These results suggest that infants' experience in one context (at home) contributes to their processing of similar stimuli in a different context (the laboratory), and have implications for how infants' early experience shapes basic cognitive processing. Copyright © 2010 Elsevier Inc. All rights reserved.
NASA Astrophysics Data System (ADS)
Mishra, Deependra K.; Umbaugh, Scott E.; Lama, Norsang; Dahal, Rohini; Marino, Dominic J.; Sackman, Joseph
2016-09-01
CVIPtools is a software package for the exploration of computer vision and image processing developed in the Computer Vision and Image Processing Laboratory at Southern Illinois University Edwardsville. CVIPtools is available in three variants - a) CVIPtools Graphical User Interface, b) CVIPtools C library and c) CVIPtools MATLAB toolbox, which makes it accessible to a variety of different users. It offers students, faculty, researchers and any user a free and easy way to explore computer vision and image processing techniques. Many functions have been implemented and are updated on a regular basis, the library has reached a level of sophistication that makes it suitable for both educational and research purposes. In this paper, the detail list of the functions available in the CVIPtools MATLAB toolbox are presented and how these functions can be used in image analysis and computer vision applications. The CVIPtools MATLAB toolbox allows the user to gain practical experience to better understand underlying theoretical problems in image processing and pattern recognition. As an example application, the algorithm for the automatic creation of masks for veterinary thermographic images is presented.
Imaging interferometer using dual broadband quantum well infrared photodetectors
NASA Technical Reports Server (NTRS)
Reininger, F.; Gunapala, S.; Bandara, S.; Grimm, M.; Johnson, D.; Peters, D.; Leland, S.; Liu, J.; Mumolo, J.; Rafol, D.;
2002-01-01
The Jet Propulsion Laboratory is developing a new imaging interferometer that has double the efficiency of conventional interferometers and only a fraction of the mass and volume. The project is being funded as part of the Defense Advanced Research Projects Agency (DARPA) Photonic Wavelength And Spatial Signal Processing program (PWASSSP).
NASA Technical Reports Server (NTRS)
2003-01-01
This sequence of three images in northern Colorado was taken by NASA's Airborne Synthetic Aperture Radar (AirSar) for the joint NASA-National Oceanic and Atmospheric Administration Cold Land Processes Experiment. The images were produced from data acquired on February 19, 21 and 23, 2002 (top to bottom), and demonstrate the effects of snow on the radar backscatter at different frequencies. The images are centered at 40 degrees north latitude and 106 degrees west longitude, 12 kilometers (7.5 miles) west of the town of Fraser. The colors red, green and blue indicate the relative total power of the radar backscatter at P-, L-, and C-bands, respectively.
The top image was acquired before snowfall; the middle image was acquired the morning after the snow. When the snow melted, the most prominent changes were visible and can be seen in the bottom image. In this image, melting snow allows less of the radar signal to backscatter and some features appear darker.The Cold Land Processes Experiment is a multi-year experiment to study how snow processes work and how snow-covered areas affect weather and climate. Fraser, Colo., is one of three study areas in northern Colorado and southern Wyoming providing ideal natural laboratories for snow research. AirSar flies aboard a NASA DC-8 based at NASA's Dryden Flight Research Center, Edwards, Calif. Built, operated and managed by NASA's Jet Propulsion Laboratory, Pasadena, Calif., AirSar is part of NASA's Earth Science Enterprise program. JPL is a division of the California Institute of Technology in Pasadena.From Mars to man - Biomedical research at the Jet Propulsion Laboratory
NASA Technical Reports Server (NTRS)
Beckenbach, E. S.
1984-01-01
In the course of the unmanned exploration of the solar system, which the California Institute of Technology's Jet Propulsion Laboratory has managed for NASA, major advances in computerized image processing, materials research, and miniature electronics design have been accomplished. This presentation shows some of the imaging results from space exploration missions, as well as biomedical research tasks based in these technologies. Among other topics, the use of polymeric microspheres in cancer therapy is discussed. Also included are ceramic applications to prosthesis development, laser applications in the treatment of coronary artery disease, multispectral imaging as used in the diagnosis of thermal burn injury, and some examples of telemetry systems as they can be involved in biological systems.
Potential medical applications of TAE
NASA Technical Reports Server (NTRS)
Fahy, J. Ben; Kaucic, Robert; Kim, Yongmin
1986-01-01
In cooperation with scientists in the University of Washington Medical School, a microcomputer-based image processing system for quantitative microscopy, called DMD1 (Digital Microdensitometer 1) was constructed. In order to make DMD1 transportable to different hosts and image processors, we have been investigating the possibility of rewriting the lower level portions of DMD1 software using Transportable Applications Executive (TAE) libraries and subsystems. If successful, we hope to produce a newer version of DMD1, called DMD2, running on an IBM PC/AT under the SCO XENIX System 5 operating system, using any of seven target image processors available in our laboratory. Following this implementation, copies of the system will be transferred to other laboratories with biomedical imaging applications. By integrating those applications into DMD2, we hope to eventually expand our system into a low-cost general purpose biomedical imaging workstation. This workstation will be useful not only as a self-contained instrument for clinical or research applications, but also as part of a large scale Digital Imaging Network and Picture Archiving and Communication System, (DIN/PACS). Widespread application of these TAE-based image processing and analysis systems should facilitate software exchange and scientific cooperation not only within the medical community, but between the medical and remote sensing communities as well.
NASA Astrophysics Data System (ADS)
Olweny, Ephrem O.; Tan, Yung K.; Faddegon, Stephen; Jackson, Neil; Wehner, Eleanor F.; Best, Sara L.; Park, Samuel K.; Thapa, Abhas; Cadeddu, Jeffrey A.; Zuzak, Karel J.
2012-03-01
Digital light processing hyperspectral imaging (DLP® HSI) was adapted for use during laparoscopic surgery by coupling a conventional laparoscopic light guide with a DLP-based Agile Light source (OL 490, Optronic Laboratories, Orlando, FL), incorporating a 0° laparoscope, and a customized digital CCD camera (DVC, Austin, TX). The system was used to characterize renal ischemia in a porcine model.
Electronic photography at NASA Langley Research Center
NASA Technical Reports Server (NTRS)
Holm, Jack M.
1994-01-01
The field of photography began a metamorphosis several years ago which promises to fundamentally change how images are captured, transmitted, and output. At this time the metamorphosis is still in the early stages, but already new processes, hardware, and software are allowing many individuals and organizations to explore the entry of imaging into the information revolution. Exploration at this time is prerequisite to leading expertise in the future, and a number of branches at LaRC have ventured into electronic and digital imaging. Their progress until recently has been limited by two factors: the lack of an integrated approach and the lack of an electronic photographic capability. The purpose of the research conducted was to address these two items. In some respects, the lack of electronic photographs has prevented application of an integrated imaging approach. Since everything could not be electronic, the tendency was to work with hard copy. Over the summer, the Photographics Section has set up an Electronic Photography Laboratory. This laboratory now has the capability to scan film images, process the images, and output the images in a variety of forms. Future plans also include electronic capture capability. The current forms of image processing available include sharpening, noise reduction, dust removal, tone correction, color balancing, image editing, cropping, electronic separations, and halftoning. Output choices include customer specified electronic file formats which can be output on magnetic or optical disks or over the network, 4400 line photographic quality prints and transparencies to 8.5 by 11 inches, and 8000 line film negatives and transparencies to 4 by 5 inches. The problem of integrated imaging involves a number of branches at LaRC including Visual Imaging, Research Printing and Publishing, Data Visualization and Animation, Advanced Computing, and various research groups. These units must work together to develop common approaches to image processing and archiving. The ultimate goal is to be able to search for images using an on-line database and image catalog. These images could then be retrieved over the network as needed, along with information on the acquisition and processing prior to storage. For this goal to be realized, a number of standard processing protocols must be developed to allow the classification of images into categories. Standard series of processing algorithms can then be applied to each category (although many of these may be adaptive between images). Since the archived image files would be standardized, it should also be possible to develop standard output processing protocols for a number of output devices. If LaRC continues the research effort begun this summer, it may be one of the first organizations to develop an integrated approach to imaging. As such, it could serve as a model for other organizations in government and the private sector.
Geometric Calibration and Validation of Ultracam Aerial Sensors
NASA Astrophysics Data System (ADS)
Gruber, Michael; Schachinger, Bernhard; Muick, Marc; Neuner, Christian; Tschemmernegg, Helfried
2016-03-01
We present details of the calibration and validation procedure of UltraCam Aerial Camera systems. Results from the laboratory calibration and from validation flights are presented for both, the large format nadir cameras and the oblique cameras as well. Thus in this contribution we show results from the UltraCam Eagle and the UltraCam Falcon, both nadir mapping cameras, and the UltraCam Osprey, our oblique camera system. This sensor offers a mapping grade nadir component together with the four oblique camera heads. The geometric processing after the flight mission is being covered by the UltraMap software product. Thus we present details about the workflow as well. The first part consists of the initial post-processing which combines image information as well as camera parameters derived from the laboratory calibration. The second part, the traditional automated aerial triangulation (AAT) is the step from single images to blocks and enables an additional optimization process. We also present some special features of our software, which are designed to better support the operator to analyze large blocks of aerial images and to judge the quality of the photogrammetric set-up.
Fixed-Cell Imaging of Schizosaccharomyces pombe.
Hagan, Iain M; Bagley, Steven
2016-07-01
The acknowledged genetic malleability of fission yeast has been matched by impressive cytology to drive major advances in our understanding of basic molecular cell biological processes. In many of the more recent studies, traditional approaches of fixation followed by processing to accommodate classical staining procedures have been superseded by live-cell imaging approaches that monitor the distribution of fusion proteins between a molecule of interest and a fluorescent protein. Although such live-cell imaging is uniquely informative for many questions, fixed-cell imaging remains the better option for others and is an important-sometimes critical-complement to the analysis of fluorescent fusion proteins by live-cell imaging. Here, we discuss the merits of fixed- and live-cell imaging as well as specific issues for fluorescence microscopy imaging of fission yeast. © 2016 Cold Spring Harbor Laboratory Press.
An efficient approach to integrated MeV ion imaging.
Nikbakht, T; Kakuee, O; Solé, V A; Vosuoghi, Y; Lamehi-Rachti, M
2018-03-01
An ionoluminescence (IL) spectral imaging system, besides the common MeV ion imaging facilities such as µ-PIXE and µ-RBS, is implemented at the Van de Graaff laboratory of Tehran. A versatile processing software is required to handle the large amount of data concurrently collected in µ-IL and common MeV ion imaging measurements through the respective methodologies. The open-source freeware PyMca, with image processing and multivariate analysis capabilities, is employed to simultaneously process common MeV ion imaging and µ-IL data. Herein, the program was adapted to support the OM_DAQ listmode data format. The appropriate performance of the µ-IL data acquisition system is confirmed through a case study. Moreover, the capabilities of the software for simultaneous analysis of µ-PIXE and µ-RBS experimental data are presented. Copyright © 2017 Elsevier B.V. All rights reserved.
Remote sensing, imaging, and signal engineering
DOE Office of Scientific and Technical Information (OSTI.GOV)
Brase, J.M.
1993-03-01
This report discusses the Remote Sensing, Imaging, and Signal Engineering (RISE) trust area which has been very active in working to define new directions. Signal and image processing have always been important support for existing programs at Lawrence Livermore National Laboratory (LLNL), but now these technologies are becoming central to the formation of new programs. Exciting new applications such as high-resolution telescopes, radar remote sensing, and advanced medical imaging are allowing us to participate in the development of new programs.
Automated and unsupervised detection of malarial parasites in microscopic images.
Purwar, Yashasvi; Shah, Sirish L; Clarke, Gwen; Almugairi, Areej; Muehlenbachs, Atis
2011-12-13
Malaria is a serious infectious disease. According to the World Health Organization, it is responsible for nearly one million deaths each year. There are various techniques to diagnose malaria of which manual microscopy is considered to be the gold standard. However due to the number of steps required in manual assessment, this diagnostic method is time consuming (leading to late diagnosis) and prone to human error (leading to erroneous diagnosis), even in experienced hands. The focus of this study is to develop a robust, unsupervised and sensitive malaria screening technique with low material cost and one that has an advantage over other techniques in that it minimizes human reliance and is, therefore, more consistent in applying diagnostic criteria. A method based on digital image processing of Giemsa-stained thin smear image is developed to facilitate the diagnostic process. The diagnosis procedure is divided into two parts; enumeration and identification. The image-based method presented here is designed to automate the process of enumeration and identification; with the main advantage being its ability to carry out the diagnosis in an unsupervised manner and yet have high sensitivity and thus reducing cases of false negatives. The image based method is tested over more than 500 images from two independent laboratories. The aim is to distinguish between positive and negative cases of malaria using thin smear blood slide images. Due to the unsupervised nature of method it requires minimal human intervention thus speeding up the whole process of diagnosis. Overall sensitivity to capture cases of malaria is 100% and specificity ranges from 50-88% for all species of malaria parasites. Image based screening method will speed up the whole process of diagnosis and is more advantageous over laboratory procedures that are prone to errors and where pathological expertise is minimal. Further this method provides a consistent and robust way of generating the parasite clearance curves.
JSC earth resources data analysis capabilities available to EOD revision B
NASA Technical Reports Server (NTRS)
1974-01-01
A list and summary description of all Johnson Space Center electronic laboratory and photographic laboratory capabilities available to earth resources division personnel for processing earth resources data are provided. The electronic capabilities pertain to those facilities and systems that use electronic and/or photographic products as output. The photographic capabilities pertain to equipment that uses photographic images as input and electronic and/or table summarizes processing steps. A general hardware description is presented for each of the data processing systems, and the titles of computer programs are used to identify the capabilities and data flow.
A new method of SC image processing for confluence estimation.
Soleimani, Sajjad; Mirzaei, Mohsen; Toncu, Dana-Cristina
2017-10-01
Stem cells images are a strong instrument in the estimation of confluency during their culturing for therapeutic processes. Various laboratory conditions, such as lighting, cell container support and image acquisition equipment, effect on the image quality, subsequently on the estimation efficiency. This paper describes an efficient image processing method for cell pattern recognition and morphological analysis of images that were affected by uneven background. The proposed algorithm for enhancing the image is based on coupling a novel image denoising method through BM3D filter with an adaptive thresholding technique for improving the uneven background. This algorithm works well to provide a faster, easier, and more reliable method than manual measurement for the confluency assessment of stem cell cultures. The present scheme proves to be valid for the prediction of the confluency and growth of stem cells at early stages for tissue engineering in reparatory clinical surgery. The method used in this paper is capable of processing the image of the cells, which have already contained various defects due to either personnel mishandling or microscope limitations. Therefore, it provides proper information even out of the worst original images available. Copyright © 2017 Elsevier Ltd. All rights reserved.
Johnson, Heath E; Haugh, Jason M
2013-12-02
This unit focuses on the use of total internal reflection fluorescence (TIRF) microscopy and image analysis methods to study the dynamics of signal transduction mediated by class I phosphoinositide 3-kinases (PI3Ks) in mammalian cells. The first four protocols cover live-cell imaging experiments, image acquisition parameters, and basic image processing and segmentation. These methods are generally applicable to live-cell TIRF experiments. The remaining protocols outline more advanced image analysis methods, which were developed in our laboratory for the purpose of characterizing the spatiotemporal dynamics of PI3K signaling. These methods may be extended to analyze other cellular processes monitored using fluorescent biosensors. Copyright © 2013 John Wiley & Sons, Inc.
A Statistical Representation of Pyrotechnic Igniter Output
NASA Astrophysics Data System (ADS)
Guo, Shuyue; Cooper, Marcia
2017-06-01
The output of simplified pyrotechnic igniters for research investigations is statistically characterized by monitoring the post-ignition external flow field with Schlieren imaging. Unique to this work is a detailed quantification of all measurable manufacturing parameters (e.g., bridgewire length, charge cavity dimensions, powder bed density) and associated shock-motion variability in the tested igniters. To demonstrate experimental precision of the recorded Schlieren images and developed image processing methodologies, commercial exploding bridgewires using wires of different parameters were tested. Finally, a statistically-significant population of manufactured igniters were tested within the Schlieren arrangement resulting in a characterization of the nominal output. Comparisons between the variances measured throughout the manufacturing processes and the calculated output variance provide insight into the critical device phenomena that dominate performance. Sandia National Laboratories is a multi-mission laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's NNSA under contract DE-AC04-94AL85000.
Planetary image conversion task
NASA Technical Reports Server (NTRS)
Martin, M. D.; Stanley, C. L.; Laughlin, G.
1985-01-01
The Planetary Image Conversion Task group processed 12,500 magnetic tapes containing raw imaging data from JPL planetary missions and produced an image data base in consistent format on 1200 fully packed 6250-bpi tapes. The output tapes will remain at JPL. A copy of the entire tape set was delivered to US Geological Survey, Flagstaff, Ariz. A secondary task converted computer datalogs, which had been stored in project specific MARK IV File Management System data types and structures, to flat-file, text format that is processable on any modern computer system. The conversion processing took place at JPL's Image Processing Laboratory on an IBM 370-158 with existing software modified slightly to meet the needs of the conversion task. More than 99% of the original digital image data was successfully recovered by the conversion task. However, processing data tapes recorded before 1975 was destructive. This discovery is of critical importance to facilities responsible for maintaining digital archives since normal periodic random sampling techniques would be unlikely to detect this phenomenon, and entire data sets could be wiped out in the act of generating seemingly positive sampling results. Reccomended follow-on activities are also included.
Advanced processing for high-bandwidth sensor systems
NASA Astrophysics Data System (ADS)
Szymanski, John J.; Blain, Phil C.; Bloch, Jeffrey J.; Brislawn, Christopher M.; Brumby, Steven P.; Cafferty, Maureen M.; Dunham, Mark E.; Frigo, Janette R.; Gokhale, Maya; Harvey, Neal R.; Kenyon, Garrett; Kim, Won-Ha; Layne, J.; Lavenier, Dominique D.; McCabe, Kevin P.; Mitchell, Melanie; Moore, Kurt R.; Perkins, Simon J.; Porter, Reid B.; Robinson, S.; Salazar, Alfonso; Theiler, James P.; Young, Aaron C.
2000-11-01
Compute performance and algorithm design are key problems of image processing and scientific computing in general. For example, imaging spectrometers are capable of producing data in hundreds of spectral bands with millions of pixels. These data sets show great promise for remote sensing applications, but require new and computationally intensive processing. The goal of the Deployable Adaptive Processing Systems (DAPS) project at Los Alamos National Laboratory is to develop advanced processing hardware and algorithms for high-bandwidth sensor applications. The project has produced electronics for processing multi- and hyper-spectral sensor data, as well as LIDAR data, while employing processing elements using a variety of technologies. The project team is currently working on reconfigurable computing technology and advanced feature extraction techniques, with an emphasis on their application to image and RF signal processing. This paper presents reconfigurable computing technology and advanced feature extraction algorithm work and their application to multi- and hyperspectral image processing. Related projects on genetic algorithms as applied to image processing will be introduced, as will the collaboration between the DAPS project and the DARPA Adaptive Computing Systems program. Further details are presented in other talks during this conference and in other conferences taking place during this symposium.
Kubo, Shoji; Takemura, Shigekazu; Sakata, Chikaharu; Urata, Yorihisa; Nishioka, Takayoshi; Nozawa, Akinori; Kinoshita, Masahiko; Hamano, Genya; Nakanuma, Yasuni; Endo, Ginji
2014-01-01
A cholangiocarcinoma outbreak among workers of an offset color proof-printing department in a printing company was recently reported. It is important to understand the clinical course leading to occupational cholangiocarcinoma development for investigation of the carcinogenesis process and for surveillance and early detection. We evaluated the changes in laboratory test results and diagnostic imaging presentation before the detection of cholangiocarcinoma. We investigated the changes in laboratory test results and diagnostic imaging presentation before the detection of cholangiocarcinoma in 2 patients because the data were available. Results The clinical courses observed in the 2 participating patients showed persistent elevation of serum γ-glutamyl transpeptidase levels with or without elevated serum levels of alanine aminotransferase and/or aspartate aminotransferase before cholangiocarcinoma detection. Dilatation of the bile ducts without tumor-induced stenosis was observed several years before cholangiocarcinoma detection and progressed gradually in both patients. The serum concentration of carbohydrate 19-9 also increased prior to cholangiocarcinoma detection in both patients. Eventually, observation of stenosis of the bile duct and a space-occupying lesion strongly suggested cholangiocarcinoma. Pathological examination of the resected specimens showed chronic bile duct injury and neoplastic lesions, such as "biliary intraepithelial neoplasia" and "intraductal papillary neoplasm of the bile duct" in various sites of the bile ducts, particularly in the dilated bile ducts. The changes in laboratory test results and diagnostic imaging might be related to the development of cholangiocarcinoma. It is important to monitor diagnostic imaging presentation and laboratory test results in workers with extended exposure to organic solvents.
NASA Technical Reports Server (NTRS)
1997-01-01
The Sojourner Rover deploys the -proton x-ray spectrometer onto the rock named Moe within the rock garden in this 75- image, color-enhanced mosaic taken by the imager on the lander. (Image of the rover in the rock garden was taken on a different day than the terrain image.) The view is to the southwest, with the Carl Sagan Memorial Station in the foreground and South Twin Peak on the horizon about 1 km from the lander. [Image processed at Jet Propulsion Laboratory, Pasadena, CA]
NOTE: original caption as published in Science MagazineAutomation in the clinical microbiology laboratory.
Novak, Susan M; Marlowe, Elizabeth M
2013-09-01
Imagine a clinical microbiology laboratory where a patient's specimens are placed on a conveyor belt and sent on an automation line for processing and plating. Technologists need only log onto a computer to visualize the images of a culture and send to a mass spectrometer for identification. Once a pathogen is identified, the system knows to send the colony for susceptibility testing. This is the future of the clinical microbiology laboratory. This article outlines the operational and staffing challenges facing clinical microbiology laboratories and the evolution of automation that is shaping the way laboratory medicine will be practiced in the future. Copyright © 2013 Elsevier Inc. All rights reserved.
Design and laboratory calibration of the compact pushbroom hyperspectral imaging system
NASA Astrophysics Data System (ADS)
Zhou, Jiankang; Ji, Yiqun; Chen, Yuheng; Chen, Xinhua; Shen, Weimin
2009-11-01
The designed hyperspectral imaging system is composed of three main parts, that is, optical subsystem, electronic subsystem and capturing subsystem. And a three-dimensional "image cube" can be obtained through push-broom. The fore-optics is commercial-off-the-shelf with high speed and three continuous zoom ratios. Since the dispersive imaging part is based on Offner relay configuration with an aberration-corrected convex grating, high power of light collection and variable view field are obtained. The holographic recording parameters of the convex grating are optimized, and the aberration of the Offner configuration dispersive system is balanced. The electronic system adopts module design, which can minimize size, mass, and power consumption. Frame transfer area-array CCD is chosen as the image sensor and the spectral line can be binned to achieve better SNR and sensitivity without any deterioration in spatial resolution. The capturing system based on the computer can set the capturing parameters, calibrate the spectrometer, process and display spectral imaging data. Laboratory calibrations are prerequisite for using precise spectral data. The spatial and spectral calibration minimize smile and keystone distortion caused by optical system, assembly and so on and fix positions of spatial and spectral line on the frame area-array CCD. Gases excitation lamp is used in smile calibration and the keystone calculation is carried out by different viewing field point source created by a series of narrow slit. The laboratory and field imaging results show that this pushbroom hyperspectral imaging system can acquire high quality spectral images.
3D chemical imaging in the laboratory by hyperspectral X-ray computed tomography
Egan, C. K.; Jacques, S. D. M.; Wilson, M. D.; Veale, M. C.; Seller, P.; Beale, A. M.; Pattrick, R. A. D.; Withers, P. J.; Cernik, R. J.
2015-01-01
We report the development of laboratory based hyperspectral X-ray computed tomography which allows the internal elemental chemistry of an object to be reconstructed and visualised in three dimensions. The method employs a spectroscopic X-ray imaging detector with sufficient energy resolution to distinguish individual elemental absorption edges. Elemental distributions can then be made by K-edge subtraction, or alternatively by voxel-wise spectral fitting to give relative atomic concentrations. We demonstrate its application to two material systems: studying the distribution of catalyst material on porous substrates for industrial scale chemical processing; and mapping of minerals and inclusion phases inside a mineralised ore sample. The method makes use of a standard laboratory X-ray source with measurement times similar to that required for conventional computed tomography. PMID:26514938
An image-processing methodology for extracting bloodstain pattern features.
Arthur, Ravishka M; Humburg, Philomena J; Hoogenboom, Jerry; Baiker, Martin; Taylor, Michael C; de Bruin, Karla G
2017-08-01
There is a growing trend in forensic science to develop methods to make forensic pattern comparison tasks more objective. This has generally involved the application of suitable image-processing methods to provide numerical data for identification or comparison. This paper outlines a unique image-processing methodology that can be utilised by analysts to generate reliable pattern data that will assist them in forming objective conclusions about a pattern. A range of features were defined and extracted from a laboratory-generated impact spatter pattern. These features were based in part on bloodstain properties commonly used in the analysis of spatter bloodstain patterns. The values of these features were consistent with properties reported qualitatively for such patterns. The image-processing method developed shows considerable promise as a way to establish measurable discriminating pattern criteria that are lacking in current bloodstain pattern taxonomies. Copyright © 2017 Elsevier B.V. All rights reserved.
2013-05-01
contract or a PhD di sse rtation typically are a " proo f- of-concept" code base that can onl y read a single set of inputs and are not designed ...AFRL-RX-WP-TR-2013-0210 COLLABORATIVE RESEARCH AND DEVELOPMENT (CR&D) III Task Order 0090: Image Processing Framework: From...public release; distribution unlimited. See additional restrictions described on inside pages. STINFO COPY AIR FORCE RESEARCH LABORATORY
TDat: An Efficient Platform for Processing Petabyte-Scale Whole-Brain Volumetric Images.
Li, Yuxin; Gong, Hui; Yang, Xiaoquan; Yuan, Jing; Jiang, Tao; Li, Xiangning; Sun, Qingtao; Zhu, Dan; Wang, Zhenyu; Luo, Qingming; Li, Anan
2017-01-01
Three-dimensional imaging of whole mammalian brains at single-neuron resolution has generated terabyte (TB)- and even petabyte (PB)-sized datasets. Due to their size, processing these massive image datasets can be hindered by the computer hardware and software typically found in biological laboratories. To fill this gap, we have developed an efficient platform named TDat, which adopts a novel data reformatting strategy by reading cuboid data and employing parallel computing. In data reformatting, TDat is more efficient than any other software. In data accessing, we adopted parallelization to fully explore the capability for data transmission in computers. We applied TDat in large-volume data rigid registration and neuron tracing in whole-brain data with single-neuron resolution, which has never been demonstrated in other studies. We also showed its compatibility with various computing platforms, image processing software and imaging systems.
Systems Biology-Driven Hypotheses Tested In Vivo: The Need to Advancing Molecular Imaging Tools.
Verma, Garima; Palombo, Alessandro; Grigioni, Mauro; La Monaca, Morena; D'Avenio, Giuseppe
2018-01-01
Processing and interpretation of biological images may provide invaluable insights on complex, living systems because images capture the overall dynamics as a "whole." Therefore, "extraction" of key, quantitative morphological parameters could be, at least in principle, helpful in building a reliable systems biology approach in understanding living objects. Molecular imaging tools for system biology models have attained widespread usage in modern experimental laboratories. Here, we provide an overview on advances in the computational technology and different instrumentations focused on molecular image processing and analysis. Quantitative data analysis through various open source software and algorithmic protocols will provide a novel approach for modeling the experimental research program. Besides this, we also highlight the predictable future trends regarding methods for automatically analyzing biological data. Such tools will be very useful to understand the detailed biological and mathematical expressions under in-silico system biology processes with modeling properties.
2001-09-30
microscopic imaging techniques, and microscopic video- cinematography protocols for both phytoplankton and zooplankton for use in current laboratory...phytoplankton, zooplankton and bioluminescence papers, and examined data/figures for layered structures. Imaging and Cinematography : Off-the-shelf...to preview it as a work-in-progress, email me (jrines@gso.uri.edu), and I will provide you with a temporary URL. Imaging and Cinematography
Gilliland, Yvonne E; Lavie, Carl J; Ahmad, Homaa; Bernal, Jose A; Cash, Michael E; Dinshaw, Homeyar; Milani, Richard V; Shah, Sangeeta; Bienvenu, Lisa; White, Christopher J
2016-03-01
We describe our process for quality improvement (QI) for a 3-year accreditation cycle in echocardiography by the Intersocietal Accreditation Commission (IAC) for a large group practice. Echocardiographic laboratory accreditation by the IAC was introduced in 1996, which is not required but could impact reimbursement. To ensure high-quality patient care and community recognition as a facility committed to providing high-quality echocardiographic services, we applied for IAC accreditation in 2010. Currently, there is little published data regarding the IAC process to meet echocardiography standards. We describe our approach for developing a multicampus QI process for echocardiographic laboratory accreditation during the 3-year cycle of accreditation by the IAC. We developed a quarterly review assessing (1) the variability of the interpretations, (2) the quality of the examinations, (3) a correlation of echocardiographic studies with other imaging modalities, (4) the timely completion of reports, (5) procedure volume, (6) maintenance of Continuing Medical Education credits by faculty, and (7) meeting Appropriate Use Criteria. We developed and implemented a multicampus process for QI during the 3-year accreditation cycle by the IAC for Echocardiography. We documented both the process and the achievement of those metrics by the Echocardiography Laboratories at the Ochsner Medical Institutions. We found the QI process using IAC standards to be a continuous educational experience for our Echocardiography Laboratory physicians and staff. We offer our process as an example and guide for other echocardiography laboratories who wish to apply for such accreditation or reaccreditation. © 2016, Wiley Periodicals, Inc.
Translational Imaging Spectroscopy for Proximal Sensing
Rogass, Christian; Koerting, Friederike M.; Mielke, Christian; Brell, Maximilian; Boesche, Nina K.; Bade, Maria; Hohmann, Christian
2017-01-01
Proximal sensing as the near field counterpart of remote sensing offers a broad variety of applications. Imaging spectroscopy in general and translational laboratory imaging spectroscopy in particular can be utilized for a variety of different research topics. Geoscientific applications require a precise pre-processing of hyperspectral data cubes to retrieve at-surface reflectance in order to conduct spectral feature-based comparison of unknown sample spectra to known library spectra. A new pre-processing chain called GeoMAP-Trans for at-surface reflectance retrieval is proposed here as an analogue to other algorithms published by the team of authors. It consists of a radiometric, a geometric and a spectral module. Each module consists of several processing steps that are described in detail. The processing chain was adapted to the broadly used HySPEX VNIR/SWIR imaging spectrometer system and tested using geological mineral samples. The performance was subjectively and objectively evaluated using standard artificial image quality metrics and comparative measurements of mineral and Lambertian diffuser standards with standard field and laboratory spectrometers. The proposed algorithm provides highly qualitative results, offers broad applicability through its generic design and might be the first one of its kind to be published. A high radiometric accuracy is achieved by the incorporation of the Reduction of Miscalibration Effects (ROME) framework. The geometric accuracy is higher than 1 μpixel. The critical spectral accuracy was relatively estimated by comparing spectra of standard field spectrometers to those from HySPEX for a Lambertian diffuser. The achieved spectral accuracy is better than 0.02% for the full spectrum and better than 98% for the absorption features. It was empirically shown that point and imaging spectrometers provide different results for non-Lambertian samples due to their different sensing principles, adjacency scattering impacts on the signal and anisotropic surface reflection properties. PMID:28800111
Wave-Optics Analysis of Pupil Imaging
NASA Technical Reports Server (NTRS)
Dean, Bruce H.; Bos, Brent J.
2006-01-01
Pupil imaging performance is analyzed from the perspective of physical optics. A multi-plane diffraction model is constructed by propagating the scalar electromagnetic field, surface by surface, along the optical path comprising the pupil imaging optical system. Modeling results are compared with pupil images collected in the laboratory. The experimental setup, although generic for pupil imaging systems in general, has application to the James Webb Space Telescope (JWST) optical system characterization where the pupil images are used as a constraint to the wavefront sensing and control process. Practical design considerations follow from the diffraction modeling which are discussed in the context of the JWST Observatory.
Myoanatomy of the velvet worm leg revealed by laboratory-based nanofocus X-ray source tomography.
Müller, Mark; de Sena Oliveira, Ivo; Allner, Sebastian; Ferstl, Simone; Bidola, Pidassa; Mechlem, Korbinian; Fehringer, Andreas; Hehn, Lorenz; Dierolf, Martin; Achterhold, Klaus; Gleich, Bernhard; Hammel, Jörg U; Jahn, Henry; Mayer, Georg; Pfeiffer, Franz
2017-11-21
X-ray computed tomography (CT) is a powerful noninvasive technique for investigating the inner structure of objects and organisms. However, the resolution of laboratory CT systems is typically limited to the micrometer range. In this paper, we present a table-top nanoCT system in conjunction with standard processing tools that is able to routinely reach resolutions down to 100 nm without using X-ray optics. We demonstrate its potential for biological investigations by imaging a walking appendage of Euperipatoides rowelli , a representative of Onychophora-an invertebrate group pivotal for understanding animal evolution. Comparative analyses proved that the nanoCT can depict the external morphology of the limb with an image quality similar to scanning electron microscopy, while simultaneously visualizing internal muscular structures at higher resolutions than confocal laser scanning microscopy. The obtained nanoCT data revealed hitherto unknown aspects of the onychophoran limb musculature, enabling the 3D reconstruction of individual muscle fibers, which was previously impossible using any laboratory-based imaging technique.
Three-dimensional reconstruction from serial sections in PC-Windows platform by using 3D_Viewer.
Xu, Yi-Hua; Lahvis, Garet; Edwards, Harlene; Pitot, Henry C
2004-11-01
Three-dimensional (3D) reconstruction from serial sections allows identification of objects of interest in 3D and clarifies the relationship among these objects. 3D_Viewer, developed in our laboratory for this purpose, has four major functions: image alignment, movie frame production, movie viewing, and shift-overlay image generation. Color images captured from serial sections were aligned; then the contours of objects of interest were highlighted in a semi-automatic manner. These 2D images were then automatically stacked at different viewing angles, and their composite images on a projected plane were recorded by an image transform-shift-overlay technique. These composition images are used in the object-rotation movie show. The design considerations of the program and the procedures used for 3D reconstruction from serial sections are described. This program, with a digital image-capture system, a semi-automatic contours highlight method, and an automatic image transform-shift-overlay technique, greatly speeds up the reconstruction process. Since images generated by 3D_Viewer are in a general graphic format, data sharing with others is easy. 3D_Viewer is written in MS Visual Basic 6, obtainable from our laboratory on request.
Mars Orbiter Camera Views the 'Face on Mars' - Calibrated, contrast enhanced, filtered,
NASA Technical Reports Server (NTRS)
1998-01-01
Shortly after midnight Sunday morning (5 April 1998 12:39 AM PST), the Mars Orbiter Camera (MOC) on the Mars Global Surveyor (MGS) spacecraft successfully acquired a high resolution image of the 'Face on Mars' feature in the Cydonia region. The image was transmitted to Earth on Sunday, and retrieved from the mission computer data base Monday morning (6 April 1998). The image was processed at the Malin Space Science Systems (MSSS) facility 9:15 AM and the raw image immediately transferred to the Jet Propulsion Laboratory (JPL) for release to the Internet. The images shown here were subsequently processed at MSSS.
The picture was acquired 375 seconds after the spacecraft's 220th close approach to Mars. At that time, the 'Face', located at approximately 40.8o N, 9.6o W, was 275 miles (444 km) from the spacecraft. The 'morning' sun was 25o above the horizon. The picture has a resolution of 14.1 feet (4.3 meters) per pixel, making it ten times higher resolution than the best previous image of the feature, which was taken by the Viking Mission in the mid-1970's. The full image covers an area 2.7 miles (4.4 km) wide and 25.7 miles (41.5 km) long. Processing Image processing has been applied to the images in order to improve the visibility of features. This processing included the following steps: The image was processed to remove the sensitivity differences between adjacent picture elements (calibrated). This removes the vertical streaking. The contrast and brightness of the image was adjusted, and 'filters' were applied to enhance detail at several scales. The image was then geometrically warped to meet the computed position information for a mercator-type map. This corrected for the left-right flip, and the non-vertical viewing angle (about 45o from vertical), but also introduced some vertical 'elongation' of the image for the same reason Greenland looks larger than Africa on a mercator map of the Earth. A section of the image, containing the 'Face' and a couple of nearly impact craters and hills, was 'cut' out of the full image and reproduced separately.See PIA01440-1442 for additional processing steps. Also see PIA01236 for the raw image.Malin Space Science Systems and the California Institute of Technology built the MOC using spare hardware from the Mars Observer mission. MSSS operates the camera from its facilities in San Diego, CA. The Jet Propulsion Laboratory's Mars Surveyor Operations Project operates the Mars Global Surveyor spacecraft with its industrial partner, Lockheed Martin Astronautics, from facilities in Pasadena, CA and Denver, CO.Mars Orbiter Camera Views the 'Face on Mars' - Calibrated, contrast enhanced, filtered
NASA Technical Reports Server (NTRS)
1998-01-01
Shortly after midnight Sunday morning (5 April 1998 12:39 AM PST), the Mars Orbiter Camera (MOC) on the Mars Global Surveyor (MGS) spacecraft successfully acquired a high resolution image of the 'Face on Mars' feature in the Cydonia region. The image was transmitted to Earth on Sunday, and retrieved from the mission computer data base Monday morning (6 April 1998). The image was processed at the Malin Space Science Systems (MSSS) facility 9:15 AM and the raw image immediately transferred to the Jet Propulsion Laboratory (JPL) for release to the Internet. The images shown here were subsequently processed at MSSS.
The picture was acquired 375 seconds after the spacecraft's 220th close approach to Mars. At that time, the 'Face', located at approximately 40.8o N, 9.6o W, was 275 miles (444 km) from the spacecraft. The 'morning' sun was 25o above the horizon. The picture has a resolution of 14.1 feet (4.3 meters) per pixel, making it ten times higher resolution than the best previous image of the feature, which was taken by the Viking Mission in the mid-1970's. The full image covers an area 2.7 miles (4.4 km) wide and 25.7 miles (41.5 km) long. Processing Image processing has been applied to the images in order to improve the visibility of features. This processing included the following steps: The image was processed to remove the sensitivity differences between adjacent picture elements (calibrated). This removes the vertical streaking. The contrast and brightness of the image was adjusted, and 'filters' were applied to enhance detail at several scales. The image was then geometrically warped to meet the computed position information for a mercator-type map. This corrected for the left-right flip, and the non-vertical viewing angle (about 45o from vertical), but also introduced some vertical 'elongation' of the image for the same reason Greenland looks larger than Africa on a mercator map of the Earth. A section of the image, containing the 'Face' and a couple of nearly impact craters and hills, was 'cut' out of the full image and reproduced separately.See PIA01441-1442 for additional processing steps. Also see PIA01236 for the raw image.Malin Space Science Systems and the California Institute of Technology built the MOC using spare hardware from the Mars Observer mission. MSSS operates the camera from its facilities in San Diego, CA. The Jet Propulsion Laboratory's Mars Surveyor Operations Project operates the Mars Global Surveyor spacecraft with its industrial partner, Lockheed Martin Astronautics, from facilities in Pasadena, CA and Denver, CO.Small SWAP 3D imaging flash ladar for small tactical unmanned air systems
NASA Astrophysics Data System (ADS)
Bird, Alan; Anderson, Scott A.; Wojcik, Michael; Budge, Scott E.
2015-05-01
The Space Dynamics Laboratory (SDL), working with Naval Research Laboratory (NRL) and industry leaders Advanced Scientific Concepts (ASC) and Hood Technology Corporation, has developed a small SWAP (size, weight, and power) 3D imaging flash ladar (LAser Detection And Ranging) sensor system concept design for small tactical unmanned air systems (STUAS). The design utilizes an ASC 3D flash ladar camera and laser in a Hood Technology gyro-stabilized gimbal system. The design is an autonomous, intelligent, geo-aware sensor system that supplies real-time 3D terrain and target images. Flash ladar and visible camera data are processed at the sensor using a custom digitizer/frame grabber with compression. Mounted in the aft housing are power, controls, processing computers, and GPS/INS. The onboard processor controls pointing and handles image data, detection algorithms and queuing. The small SWAP 3D imaging flash ladar sensor system generates georeferenced terrain and target images with a low probability of false return and <10 cm range accuracy through foliage in real-time. The 3D imaging flash ladar is designed for a STUAS with a complete system SWAP estimate of <9 kg, <0.2 m3 and <350 W power. The system is modeled using LadarSIM, a MATLAB® and Simulink®- based ladar system simulator designed and developed by the Center for Advanced Imaging Ladar (CAIL) at Utah State University. We will present the concept design and modeled performance predictions.
Compact, Automated, Frequency-Agile Microspectrofluorimeter
NASA Technical Reports Server (NTRS)
Fernandez, Salvador M.; Guignon, Ernest F.
1995-01-01
Compact, reliable, rugged, automated cell-culture and frequency-agile microspectrofluorimetric apparatus developed to perform experiments involving photometric imaging observations of single live cells. In original application, apparatus operates mostly unattended aboard spacecraft; potential terrestrial applications include automated or semiautomated diagnosis of pathological tissues in clinical laboratories, biomedical instrumentation, monitoring of biological process streams, and portable instrumentation for testing biological conditions in various environments. Offers obvious advantages over present laboratory instrumentation.
Real-time landmark-based unrestrained animal tracking system for motion-corrected PET/SPECT imaging
DOE Office of Scientific and Technical Information (OSTI.GOV)
J.S. Goddard; S.S. Gleason; M.J. Paulus
2003-08-01
Oak Ridge National Laboratory (ORNL) and Jefferson Lab and are collaborating to develop a new high-resolution single photon emission tomography (SPECT) instrument to image unrestrained laboratory animals. This technology development will allow functional imaging studies to be performed on the animals without the use of anesthetic agents. This technology development could have eventual clinical applications for performing functional imaging studies on patients that cannot remain still (Parkinson's patients, Alzheimer's patients, small children, etc.) during a PET or SPECT scan. A key component of this new device is the position tracking apparatus. The tracking apparatus is an integral part of themore » gantry and designed to measure the spatial position of the animal at a rate of 10-15 frames per second with sub-millimeter accuracy. Initial work focuses on brain studies where anesthetic agents or physical restraint can significantly impact physiologic processes.« less
Data analysis for GOPEX image frames
NASA Technical Reports Server (NTRS)
Levine, B. M.; Shaik, K. S.; Yan, T.-Y.
1993-01-01
The data analysis based on the image frames received at the Solid State Imaging (SSI) camera of the Galileo Optical Experiment (GOPEX) demonstration conducted between 9-16 Dec. 1992 is described. Laser uplink was successfully established between the ground and the Galileo spacecraft during its second Earth-gravity-assist phase in December 1992. SSI camera frames were acquired which contained images of detected laser pulses transmitted from the Table Mountain Facility (TMF), Wrightwood, California, and the Starfire Optical Range (SOR), Albuquerque, New Mexico. Laser pulse data were processed using standard image-processing techniques at the Multimission Image Processing Laboratory (MIPL) for preliminary pulse identification and to produce public release images. Subsequent image analysis corrected for background noise to measure received pulse intensities. Data were plotted to obtain histograms on a daily basis and were then compared with theoretical results derived from applicable weak-turbulence and strong-turbulence considerations. Processing steps are described and the theories are compared with the experimental results. Quantitative agreement was found in both turbulence regimes, and better agreement would have been found, given more received laser pulses. Future experiments should consider methods to reliably measure low-intensity pulses, and through experimental planning to geometrically locate pulse positions with greater certainty.
NASA Technical Reports Server (NTRS)
1999-01-01
This brief movie illustrates the passage of the Moon through the Saturn-bound Cassini spacecraft's wide-angle camera field of view as the spacecraft passed by the Moon on the way to its closest approach with Earth on August 17, 1999. From beginning to end of the sequence, 25 wide-angle images (with a spatial image scale of about 14 miles per pixel (about 23 kilometers)were taken over the course of 7 and 1/2 minutes through a series of narrow and broadband spectral filters and polarizers, ranging from the violet to the near-infrared regions of the spectrum, to calibrate the spectral response of the wide-angle camera. The exposure times range from 5 milliseconds to 1.5 seconds. Two of the exposures were smeared and have been discarded and replaced with nearby images to make a smooth movie sequence. All images were scaled so that the brightness of Crisium basin, the dark circular region in the upper right, is approximately the same in every image. The imaging data were processed and released by the Cassini Imaging Central Laboratory for Operations (CICLOPS)at the University of Arizona's Lunar and Planetary Laboratory, Tucson, AZ.
Photo Credit: NASA/JPL/Cassini Imaging Team/University of Arizona Cassini, launched in 1997, is a joint mission of NASA, the European Space Agency and Italian Space Agency. The mission is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Space Science, Washington DC. JPL is a division of the California Institute of Technology, Pasadena, CA.Routine Digital Pathology Workflow: The Catania Experience
Fraggetta, Filippo; Garozzo, Salvatore; Zannoni, Gian Franco; Pantanowitz, Liron; Rossi, Esther Diana
2017-01-01
Introduction: Successful implementation of whole slide imaging (WSI) for routine clinical practice has been accomplished in only a few pathology laboratories worldwide. We report the transition to an effective and complete digital surgical pathology workflow in the pathology laboratory at Cannizzaro Hospital in Catania, Italy. Methods: All (100%) permanent histopathology glass slides were digitized at ×20 using Aperio AT2 scanners. Compatible stain and scanning slide racks were employed to streamline operations. eSlide Manager software was bidirectionally interfaced with the anatomic pathology laboratory information system. Virtual slide trays connected to the two-dimensional (2D) barcode tracking system allowed pathologists to confirm that they were correctly assigned slides and that all tissues on these glass slides were scanned. Results: Over 115,000 glass slides were digitized with a scan fail rate of around 1%. Drying glass slides before scanning minimized them sticking to scanner racks. Implementation required introduction of a 2D barcode tracking system and modification of histology workflow processes. Conclusion: Our experience indicates that effective adoption of WSI for primary diagnostic use was more dependent on optimizing preimaging variables and integration with the laboratory information system than on information technology infrastructure and ensuring pathologist buy-in. Implementation of digital pathology for routine practice not only leveraged the benefits of digital imaging but also creates an opportunity for establishing standardization of workflow processes in the pathology laboratory. PMID:29416914
Routine Digital Pathology Workflow: The Catania Experience.
Fraggetta, Filippo; Garozzo, Salvatore; Zannoni, Gian Franco; Pantanowitz, Liron; Rossi, Esther Diana
2017-01-01
Successful implementation of whole slide imaging (WSI) for routine clinical practice has been accomplished in only a few pathology laboratories worldwide. We report the transition to an effective and complete digital surgical pathology workflow in the pathology laboratory at Cannizzaro Hospital in Catania, Italy. All (100%) permanent histopathology glass slides were digitized at ×20 using Aperio AT2 scanners. Compatible stain and scanning slide racks were employed to streamline operations. eSlide Manager software was bidirectionally interfaced with the anatomic pathology laboratory information system. Virtual slide trays connected to the two-dimensional (2D) barcode tracking system allowed pathologists to confirm that they were correctly assigned slides and that all tissues on these glass slides were scanned. Over 115,000 glass slides were digitized with a scan fail rate of around 1%. Drying glass slides before scanning minimized them sticking to scanner racks. Implementation required introduction of a 2D barcode tracking system and modification of histology workflow processes. Our experience indicates that effective adoption of WSI for primary diagnostic use was more dependent on optimizing preimaging variables and integration with the laboratory information system than on information technology infrastructure and ensuring pathologist buy-in. Implementation of digital pathology for routine practice not only leveraged the benefits of digital imaging but also creates an opportunity for establishing standardization of workflow processes in the pathology laboratory.
Automated Reduction of Data from Images and Holograms
NASA Technical Reports Server (NTRS)
Lee, G. (Editor); Trolinger, James D. (Editor); Yu, Y. H. (Editor)
1987-01-01
Laser techniques are widely used for the diagnostics of aerodynamic flow and particle fields. The storage capability of holograms has made this technique an even more powerful. Over 60 researchers in the field of holography, particle sizing and image processing convened to discuss these topics. The research program of ten government laboratories, several universities, industry and foreign countries were presented. A number of papers on holographic interferometry with applications to fluid mechanics were given. Several papers on combustion and particle sizing, speckle velocimetry and speckle interferometry were given. A session on image processing and automated fringe data reduction techniques and the type of facilities for fringe reduction was held.
Medical Image Processing Server applied to Quality Control of Nuclear Medicine.
NASA Astrophysics Data System (ADS)
Vergara, C.; Graffigna, J. P.; Marino, E.; Omati, S.; Holleywell, P.
2016-04-01
This paper is framed within the area of medical image processing and aims to present the process of installation, configuration and implementation of a processing server of medical images (MIPS) in the Fundación Escuela de Medicina Nuclear located in Mendoza, Argentina (FUESMEN). It has been developed in the Gabinete de Tecnologia Médica (GA.TE.ME), Facultad de Ingeniería-Universidad Nacional de San Juan. MIPS is a software that using the DICOM standard, can receive medical imaging studies of different modalities or viewing stations, then it executes algorithms and finally returns the results to other devices. To achieve the objectives previously mentioned, preliminary tests were conducted in the laboratory. More over, tools were remotely installed in clinical enviroment. The appropiate protocols for setting up and using them in different services were established once defined those suitable algorithms. Finally, it’s important to focus on the implementation and training that is provided in FUESMEN, using nuclear medicine quality control processes. Results on implementation are exposed in this work.
NASA Astrophysics Data System (ADS)
Beckert, M. Brooke; Gallego, Sabrina; Elder, Eric; Nadler, Jason
2016-10-01
This study sought to mitigate risk in transitioning newly developed glass-ceramic scintillator technology from a laboratory concept to commercial product by identifying the most significant hurdles to increased scale. These included selection of cost effective raw material sources, investigation of process parameters with the most significant impact on performance, and synthesis steps that could see the greatest benefit from participation of an industry partner that specializes in glass or optical component manufacturing. Efforts focused on enhancing the performance of glass-ceramic nanocomposite scintillators developed specifically for medical imaging via composition and process modifications that ensured efficient capture of incident X-ray energy and emission of scintillation light. The use of cost effective raw materials and existing manufacturing methods demonstrated proof-of-concept for economical viable alternatives to existing benchmark materials, as well as possible disruptive applications afforded by novel geometries and comparatively lower cost per volume. The authors now seek the expertise of industry to effectively navigate the transition from laboratory demonstrations to pilot scale production and testing to evince the industry of the viability and usefulness of composite-based scintillators.
Handheld hyperspectral imager for standoff detection of chemical and biological aerosols
NASA Astrophysics Data System (ADS)
Hinnrichs, Michele; Jensen, James O.; McAnally, Gerard
2004-08-01
Pacific Advanced Technology has developed a small hand held imaging spectrometer, Sherlock, for gas leak and aerosol detection and imaging. The system is based on a patented technique, (IMSS Image Multi-spectral Sensing), that uses diffractive optics and image processing algorithms to detect spectral information about objects in the scene of the camera. This cameras technology has been tested at Dugway Proving Ground and Dstl Porton Down facilities looking at Chemical and Biological agent simulants. In addition to Chemical and Biological detection, the camera has been used for environmental monitoring of green house gases and is currently undergoing extensive laboratory and field testing by the Gas Technology Institute, British Petroleum and Shell Oil for applications for gas leak detection and repair. In this paper we will present some of the results from the data collection at the TRE test at Dugway Proving Ground during the summer of 2002 and laboratory testing at the Dstl facility at Porton Down in the UK in the fall of 2002.
Police witness identification images: a geometric morphometric analysis.
Hayes, Susan; Tullberg, Cameron
2012-11-01
Research into witness identification images typically occurs within the laboratory and involves subjective likeness and recognizability judgments. This study analyzed whether actual witness identification images systematically alter the facial shapes of the suspects described. The shape analysis tool, geometric morphometrics, was applied to 46 homologous facial landmarks displayed on 50 witness identification images and their corresponding arrest photographs, using principal component analysis and multivariate regressions. The results indicate that compared with arrest photographs, witness identification images systematically depict suspects with lowered and medially located eyebrows (p = <0.000001). This was found to occur independently of the Police Artist, and did not occur with composites produced under laboratory conditions. There are several possible explanations for this finding, including any, or all, of the following: The suspect was frowning at the time of the incident, the witness had negative feelings toward the suspect, this is an effect of unfamiliar face processing, the suspect displayed fear at the time of their arrest photograph. © 2012 American Academy of Forensic Sciences.
A laboratory demonstration of the capability to image an Earth-like extrasolar planet.
Trauger, John T; Traub, Wesley A
2007-04-12
The detection and characterization of an Earth-like planet orbiting a nearby star requires a telescope with an extraordinarily large contrast at small angular separations. At visible wavelengths, an Earth-like planet would be 1 x 10(-10) times fainter than the star at angular separations of typically 0.1 arcsecond or less. There are several proposed space telescope systems that could, in principle, achieve this. Here we report a laboratory experiment that reaches these limits. We have suppressed the diffracted and scattered light near a star-like source to a level of 6 x 10(-10) times the peak intensity in individual coronagraph images. In a series of such images, together with simple image processing, we have effectively reduced this to a residual noise level of about 0.1 x 10(-10). This demonstrates that a coronagraphic telescope in space could detect and spectroscopically characterize nearby exoplanetary systems, with the sensitivity to image an 'Earth-twin' orbiting a nearby star.
Toward a Virtual Laboratory to Assess Biodiversity from Data Produced by an Underwater Microscope
NASA Astrophysics Data System (ADS)
Beaulieu, S.; Ball, M.; Futrelle, J.; Sosik, H. M.
2016-12-01
Real-time data from sensors deployed in the ocean are increasingly available online for broad use by scientists, educators, and the public. Such data have previously been limited to physical parameters, but data for biological parameters are becoming more prevalent with the development of new submersible instruments. Imaging FlowCytobot (IFCB), for example, automatically and rapidly acquires images of microscopic algae (phytoplankton) at the base of the food web in marine ecosystems. These images and products from image processing and automated classification are accessible via web services from an IFCB dashboard. However, until now, to process these data further into results representing the biodiversity of the phytoplankton required a complex workflow that could only be executed by scientists involved in the instrument development. Also, because these data have been collected near continuously for a decade, a number of "big data" challenges arise in attempting to implement and reproduce the workflow. Our research is geared toward the development of a virtual laboratory to enable other scientists and educators, as new users of data from this underwater microscope, to generate biodiversity data products. Our solution involves an electronic notebook (Jupyter Notebook) that can be re-purposed by users with some Python programming experience. However, when we scaled the virtual laboratory to accommodate a 2-month example time series (thousands of binned files each representing thousands of images), we needed to expand the execution environment to include batch processing outside of the notebook. We will share how we packaged these tools to share with other scientists to perform their own biodiversity assessment from data available on an IFCB dashboard. Additional outcomes of software development in this project include a prototype for time-series visualizations to be generated in near-real-time and recommendations for new products accessible via web services from the IFCB dashboard.
Three Channel Polarimetric Based Data Deconvolution
2011-03-01
which have been degraded by atmospheric turbulence and noise . This thesis explains in entirety the process used for deblurring and de- noising images...10 3.1.2 Noise Model...Blur and Noise .............................................................................................................. 34 5.3 Laboratory Results
A user's guide to the Mariner 9 television reduced data record
NASA Technical Reports Server (NTRS)
Seidman, J. B.; Green, W. B.; Jepsen, P. L.; Ruiz, R. M.; Thorpe, T. E.
1973-01-01
The Mariner 9 television experiment used two cameras to photograph Mars from an orbiting spacecraft. For quantitative analysis of the image data transmitted to earth, the pictures were processed by digital computer to remove camera-induced distortions. The removal process was performed by the JPL Image Processing Laboratory (IPL) using calibration data measured during prelaunch testing of the cameras. The Reduced Data Record (RDR) is the set of data which results from the distortion-removal, or decalibration, process. The principal elements of the RDR are numerical data on magnetic tape and photographic data. Numerical data are the result of correcting for geometric and photometric distortions and residual-image effects. Photographic data are reproduced on negative and positive transparency films, strip contact and enlargement prints, and microfiche positive transparency film. The photographic data consist of two versions of each TV frame created by applying two special enhancement processes to the numerical data.
NASA Astrophysics Data System (ADS)
Kerner, H. R.; Bell, J. F., III; Ben Amor, H.
2017-12-01
The Mastcam color imaging system on the Mars Science Laboratory Curiosity rover acquires images within Gale crater for a variety of geologic and atmospheric studies. Images are often JPEG compressed before being downlinked to Earth. While critical for transmitting images on a low-bandwidth connection, this compression can result in image artifacts most noticeable as anomalous brightness or color changes within or near JPEG compression block boundaries. In images with significant high-frequency detail (e.g., in regions showing fine layering or lamination in sedimentary rocks), the image might need to be re-transmitted losslessly to enable accurate scientific interpretation of the data. The process of identifying which images have been adversely affected by compression artifacts is performed manually by the Mastcam science team, costing significant expert human time. To streamline the tedious process of identifying which images might need to be re-transmitted, we present an input-efficient neural network solution for predicting the perceived quality of a compressed Mastcam image. Most neural network solutions require large amounts of hand-labeled training data for the model to learn the target mapping between input (e.g. distorted images) and output (e.g. quality assessment). We propose an automatic labeling method using joint entropy between a compressed and uncompressed image to avoid the need for domain experts to label thousands of training examples by hand. We use automatically labeled data to train a convolutional neural network to estimate the probability that a Mastcam user would find the quality of a given compressed image acceptable for science analysis. We tested our model on a variety of Mastcam images and found that the proposed method correlates well with image quality perception by science team members. When assisted by our proposed method, we estimate that a Mastcam investigator could reduce the time spent reviewing images by a minimum of 70%.
An all-optronic synthetic aperture lidar
NASA Astrophysics Data System (ADS)
Turbide, Simon; Marchese, Linda; Terroux, Marc; Babin, François; Bergeron, Alain
2012-09-01
Synthetic Aperture Radar (SAR) is a mature technology that overcomes the diffraction limit of an imaging system's real aperture by taking advantage of the platform motion to coherently sample multiple sections of an aperture much larger than the physical one. Synthetic Aperture Lidar (SAL) is the extension of SAR to much shorter wavelengths (1.5 μm vs 5 cm). This new technology can offer higher resolution images in day or night time as well as in certain adverse conditions. It could be a powerful tool for Earth monitoring (ship detection, frontier surveillance, ocean monitoring) from aircraft, unattended aerial vehicle (UAV) or spatial platforms. A continuous flow of high-resolution images covering large areas would however produce a large amount of data involving a high cost in term of post-processing computational time. This paper presents a laboratory demonstration of a SAL system complete with image reconstruction based on optronic processing. This differs from the more traditional digital approach by its real-time processing capability. The SAL system is discussed and images obtained from a non-metallic diffuse target at ranges up to 3m are shown, these images being processed by a real-time optronic SAR processor origiinally designed to reconstruct SAR images from ENVISAT/ASAR data.
GIS Facility and Services at the Ronald Greeley Center for Planetary Studies
NASA Astrophysics Data System (ADS)
Nelson, D. M.; Williams, D. A.
2017-06-01
At the RGCPS, we established a Geographic Information Systems (GIS) computer laboratory, where we instruct researchers how to use GIS and image processing software. Seminars demonstrate viewing, integrating, and digitally mapping planetary data.
Recording 360 Degree Holograms in the Undergraduate Laboratory
ERIC Educational Resources Information Center
Stirn, Bradley A.
1975-01-01
Describes an experiment for recording holograms using a minimum of costly apparatus. Includes a description of apparatus and materials, the procedure for recording the hologram, the processing of the hologram, and the reconstruction of the image. (GS)
Meteorological Instruction Software
NASA Technical Reports Server (NTRS)
1990-01-01
At Florida State University and the Naval Postgraduate School, meteorology students have the opportunity to apply theoretical studies to current weather phenomena, even prepare forecasts and see how their predictions stand up utilizing GEMPAK. GEMPAK can display data quickly in both conventional and non-traditional ways, allowing students to view multiple perspectives of the complex three-dimensional atmospheric structure. With GEMPAK, mathematical equations come alive as students do homework and laboratory assignments on the weather events happening around them. Since GEMPAK provides data on a 'today' basis, each homework assignment is new. At the Naval Postgraduate School, students are now using electronically-managed environmental data in the classroom. The School's Departments of Meteorology and Oceanography have developed the Interactive Digital Environment Analysis (IDEA) Laboratory. GEMPAK is the IDEA Lab's general purpose display package; the IDEA image processing package is a modified version of NASA's Device Management System. Bringing the graphic and image processing packages together is NASA's product, the Transportable Application Executive (TAE).
Fast imaging of laboratory core floods using 3D compressed sensing RARE MRI.
Ramskill, N P; Bush, I; Sederman, A J; Mantle, M D; Benning, M; Anger, B C; Appel, M; Gladden, L F
2016-09-01
Three-dimensional (3D) imaging of the fluid distributions within the rock is essential to enable the unambiguous interpretation of core flooding data. Magnetic resonance imaging (MRI) has been widely used to image fluid saturation in rock cores; however, conventional acquisition strategies are typically too slow to capture the dynamic nature of the displacement processes that are of interest. Using Compressed Sensing (CS), it is possible to reconstruct a near-perfect image from significantly fewer measurements than was previously thought necessary, and this can result in a significant reduction in the image acquisition times. In the present study, a method using the Rapid Acquisition with Relaxation Enhancement (RARE) pulse sequence with CS to provide 3D images of the fluid saturation in rock core samples during laboratory core floods is demonstrated. An objective method using image quality metrics for the determination of the most suitable regularisation functional to be used in the CS reconstructions is reported. It is shown that for the present application, Total Variation outperforms the Haar and Daubechies3 wavelet families in terms of the agreement of their respective CS reconstructions with a fully-sampled reference image. Using the CS-RARE approach, 3D images of the fluid saturation in the rock core have been acquired in 16min. The CS-RARE technique has been applied to image the residual water saturation in the rock during a water-water displacement core flood. With a flow rate corresponding to an interstitial velocity of vi=1.89±0.03ftday(-1), 0.1 pore volumes were injected over the course of each image acquisition, a four-fold reduction when compared to a fully-sampled RARE acquisition. Finally, the 3D CS-RARE technique has been used to image the drainage of dodecane into the water-saturated rock in which the dynamics of the coalescence of discrete clusters of the non-wetting phase are clearly observed. The enhancement in the temporal resolution that has been achieved using the CS-RARE approach enables dynamic transport processes pertinent to laboratory core floods to be investigated in 3D on a time-scale and with a spatial resolution that, until now, has not been possible. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.
Electronic Photography at the NASA Langley Research Center
NASA Technical Reports Server (NTRS)
Holm, Jack; Judge, Nancianne
1995-01-01
An electronic photography facility has been established in the Imaging & Photographic Technology Section, Visual Imaging Branch, at the NASA Langley Research Center (LaRC). The purpose of this facility is to provide the LaRC community with access to digital imaging technology. In particular, capabilities have been established for image scanning, direct image capture, optimized image processing for storage, image enhancement, and optimized device dependent image processing for output. Unique approaches include: evaluation and extraction of the entire film information content through scanning; standardization of image file tone reproduction characteristics for optimal bit utilization and viewing; education of digital imaging personnel on the effects of sampling and quantization to minimize image processing related information loss; investigation of the use of small kernel optimal filters for image restoration; characterization of a large array of output devices and development of image processing protocols for standardized output. Currently, the laboratory has a large collection of digital image files which contain essentially all the information present on the original films. These files are stored at 8-bits per color, but the initial image processing was done at higher bit depths and/or resolutions so that the full 8-bits are used in the stored files. The tone reproduction of these files has also been optimized so the available levels are distributed according to visual perceptibility. Look up tables are available which modify these files for standardized output on various devices, although color reproduction has been allowed to float to some extent to allow for full utilization of output device gamut.
NASA Technical Reports Server (NTRS)
Stanboli, Alice
2013-01-01
Phxtelemproc is a C/C++ based telemetry processing program that processes SFDU telemetry packets from the Telemetry Data System (TDS). It generates Experiment Data Records (EDRs) for several instruments including surface stereo imager (SSI); robotic arm camera (RAC); robotic arm (RA); microscopy, electrochemistry, and conductivity analyzer (MECA); and the optical microscope (OM). It processes both uncompressed and compressed telemetry, and incorporates unique subroutines for the following compression algorithms: JPEG Arithmetic, JPEG Huffman, Rice, LUT3, RA, and SX4. This program was in the critical path for the daily command cycle of the Phoenix mission. The products generated by this program were part of the RA commanding process, as well as the SSI, RAC, OM, and MECA image and science analysis process. Its output products were used to advance science of the near polar regions of Mars, and were used to prove that water is found in abundance there. Phxtelemproc is part of the MIPL (Multi-mission Image Processing Laboratory) system. This software produced Level 1 products used to analyze images returned by in situ spacecraft. It ultimately assisted in operations, planning, commanding, science, and outreach.
1979-01-17
Photo by Voyager 1 Jupiter's satellite Io poses before the giant planet in this photo returned Jan 17, 1979 from a distance of 29 million miles (47 million kilometers). The satellite's shadow can be seen falling on the face of Jupiter at left. Io is traveling from left to right in its one-and-three-quarter-day orbit around Jupiter. Even from this great distance the image of Io shows dark poles and bright equatorial region. Voyager 1 will make its closest approach to Jupiter 174, 000 miles (280,000 kilometer) on March 5. It will then continue to Saturn in November 1980. This color photo was assembled at Jet Propulsion Laboratory's Image Processing Lab from three black and white images taken through filters. The Voyagers are managed for NASA's Office of Space Science by Jet Propulsion Laboratory. (JPL Ref: P-20946C)
LabVIEW application for motion tracking using USB camera
NASA Astrophysics Data System (ADS)
Rob, R.; Tirian, G. O.; Panoiu, M.
2017-05-01
The technical state of the contact line and also the additional equipment in electric rail transport is very important for realizing the repairing and maintenance of the contact line. During its functioning, the pantograph motion must stay in standard limits. Present paper proposes a LabVIEW application which is able to track in real time the motion of a laboratory pantograph and also to acquire the tracking images. An USB webcam connected to a computer acquires the desired images. The laboratory pantograph contains an automatic system which simulates the real motion. The tracking parameters are the horizontally motion (zigzag) and the vertically motion which can be studied in separate diagrams. The LabVIEW application requires appropriate tool-kits for vision development. Therefore the paper describes the subroutines that are especially programmed for real-time image acquisition and also for data processing.
NASA Astrophysics Data System (ADS)
Bultreys, Tom; Boone, Marijn A.; Boone, Matthieu N.; De Schryver, Thomas; Masschaele, Bert; Van Hoorebeke, Luc; Cnudde, Veerle
2016-09-01
Over the past decade, the wide-spread implementation of laboratory-based X-ray micro-computed tomography (micro-CT) scanners has revolutionized both the experimental and numerical research on pore-scale transport in geological materials. The availability of these scanners has opened up the possibility to image a rock's pore space in 3D almost routinely to many researchers. While challenges do persist in this field, we treat the next frontier in laboratory-based micro-CT scanning: in-situ, time-resolved imaging of dynamic processes. Extremely fast (even sub-second) micro-CT imaging has become possible at synchrotron facilities over the last few years, however, the restricted accessibility of synchrotrons limits the amount of experiments which can be performed. The much smaller X-ray flux in laboratory-based systems bounds the time resolution which can be attained at these facilities. Nevertheless, progress is being made to improve the quality of measurements performed on the sub-minute time scale. We illustrate this by presenting cutting-edge pore scale experiments visualizing two-phase flow and solute transport in real-time with a lab-based environmental micro-CT set-up. To outline the current state of this young field and its relevance to pore-scale transport research, we critically examine its current bottlenecks and their possible solutions, both on the hardware and the software level. Further developments in laboratory-based, time-resolved imaging could prove greatly beneficial to our understanding of transport behavior in geological materials and to the improvement of pore-scale modeling by providing valuable validation.
Autonomous Science Analysis with the New Millennium Program-Autonomous Sciencecraft Experiment
NASA Astrophysics Data System (ADS)
Doggett, T.; Davies, A. G.; Castano, R. A.; Baker, V. R.; Dohm, J. M.; Greeley, R.; Williams, K. K.; Chien, S.; Sherwood, R.
2002-12-01
The NASA New Millennium Program (NMP) is a testbed for new, high-risk technologies, including new software and hardware. The Autonomous Sciencecraft Experiment (ASE) will fly on the Air Force Research Laboratory TechSat-21 mission in 2006 is such a NMP mission, and is managed by the Jet Propulsion Laboratory, California Institute of Technology. TechSat-21 consists of three satellites, each equipped with X-band Synthetic Aperture Radar (SAR) that will occupy a 13-day repeat track Earth orbit. The main science objectives of ASE are to demonstrate that process-related change detection and feature identification can be conducted autonomously during space flight, leading to autonomous onboard retargeting of the spacecraft. This mission will observe transient geological and environmental processes using SAR. Examples of geologic processes that may be observed and investigated include active volcanism, the movement of sand dunes and transient features in desert environments, water flooding, and the formation and break-up of lake ice. Science software onboard the spacecraft will allow autonomous processing and formation of SAR images and extraction of scientific information. The subsequent analyses, performed on images formed onboard from the SAR data, will include feature identification using scalable feature "templates" for each target, change detection through comparison of current and archived images, and science discovery, a search for other features of interest in each image. This approach results in obtaining the same science return for a reduced amount of resource use (such as downlink) when compared to that from a mission operating without ASE technology. Redundant data is discarded. The science-driven goals of ASE will evolve during the ASE mission through onboard replanning software that can re-task satellite operations. If necessary, as a result of a discovery made autonomously by onboard science processing, existing observation sequences will be pre-empted to obtain data of potential high scientific content. Flight validation of this software will enable radically different missions with significant onboard decision-making and novel science concepts (onboard decision making and selective data return). This work has been carried out at the Jet Propulsion Laboratory-California Institute of Technology, under contract to NASA.
Web-Based Mapping Puts the World at Your Fingertips
NASA Technical Reports Server (NTRS)
2008-01-01
NASA's award-winning Earth Resources Laboratory Applications Software (ELAS) package was developed at Stennis Space Center. Since 1978, ELAS has been used worldwide for processing satellite and airborne sensor imagery data of the Earth's surface into readable and usable information. DATASTAR Inc., of Picayune, Mississippi, has used ELAS software in the DATASTAR Image Processing Exploitation (DIPEx) desktop and Internet image processing, analysis, and manipulation software. The new DIPEx Version III includes significant upgrades and improvements compared to its esteemed predecessor. A true World Wide Web application, this product evolved with worldwide geospatial dimensionality and numerous other improvements that seamlessly support the World Wide Web version.
A computer system for processing data from routine pulmonary function tests.
Pack, A I; McCusker, R; Moran, F
1977-01-01
In larger pulmonary function laboratories there is a need for computerised techniques of data processing. A flexible computer system, which is used routinely, is described. The system processes data from a relatively large range of tests. Two types of output are produced--one for laboratory purposes, and one for return to the referring physician. The system adds an automatic interpretative report for each set of results. In developing the interpretative system it has been necessary to utilise a number of arbitrary definitions. The present terminology for reporting pulmonary function tests has limitations. The computer interpretation system affords the opportunity to take account of known interaction between measurements of function and different pathological states. Images PMID:329462
NASA Astrophysics Data System (ADS)
Coudarcher, Rémi; Duculty, Florent; Serot, Jocelyn; Jurie, Frédéric; Derutin, Jean-Pierre; Dhome, Michel
2005-12-01
SKiPPER is a SKeleton-based Parallel Programming EnviRonment being developed since 1996 and running at LASMEA Laboratory, the Blaise-Pascal University, France. The main goal of the project was to demonstrate the applicability of skeleton-based parallel programming techniques to the fast prototyping of reactive vision applications. This paper deals with the special features embedded in the latest version of the project: algorithmic skeleton nesting capabilities and a fully dynamic operating model. Throughout the case study of a complete and realistic image processing application, in which we have pointed out the requirement for skeleton nesting, we are presenting the operating model of this feature. The work described here is one of the few reported experiments showing the application of skeleton nesting facilities for the parallelisation of a realistic application, especially in the area of image processing. The image processing application we have chosen is a 3D face-tracking algorithm from appearance.
A New Parallel Approach for Accelerating the GPU-Based Execution of Edge Detection Algorithms
Emrani, Zahra; Bateni, Soroosh; Rabbani, Hossein
2017-01-01
Real-time image processing is used in a wide variety of applications like those in medical care and industrial processes. This technique in medical care has the ability to display important patient information graphi graphically, which can supplement and help the treatment process. Medical decisions made based on real-time images are more accurate and reliable. According to the recent researches, graphic processing unit (GPU) programming is a useful method for improving the speed and quality of medical image processing and is one of the ways of real-time image processing. Edge detection is an early stage in most of the image processing methods for the extraction of features and object segments from a raw image. The Canny method, Sobel and Prewitt filters, and the Roberts’ Cross technique are some examples of edge detection algorithms that are widely used in image processing and machine vision. In this work, these algorithms are implemented using the Compute Unified Device Architecture (CUDA), Open Source Computer Vision (OpenCV), and Matrix Laboratory (MATLAB) platforms. An existing parallel method for Canny approach has been modified further to run in a fully parallel manner. This has been achieved by replacing the breadth- first search procedure with a parallel method. These algorithms have been compared by testing them on a database of optical coherence tomography images. The comparison of results shows that the proposed implementation of the Canny method on GPU using the CUDA platform improves the speed of execution by 2–100× compared to the central processing unit-based implementation using the OpenCV and MATLAB platforms. PMID:28487831
A New Parallel Approach for Accelerating the GPU-Based Execution of Edge Detection Algorithms.
Emrani, Zahra; Bateni, Soroosh; Rabbani, Hossein
2017-01-01
Real-time image processing is used in a wide variety of applications like those in medical care and industrial processes. This technique in medical care has the ability to display important patient information graphi graphically, which can supplement and help the treatment process. Medical decisions made based on real-time images are more accurate and reliable. According to the recent researches, graphic processing unit (GPU) programming is a useful method for improving the speed and quality of medical image processing and is one of the ways of real-time image processing. Edge detection is an early stage in most of the image processing methods for the extraction of features and object segments from a raw image. The Canny method, Sobel and Prewitt filters, and the Roberts' Cross technique are some examples of edge detection algorithms that are widely used in image processing and machine vision. In this work, these algorithms are implemented using the Compute Unified Device Architecture (CUDA), Open Source Computer Vision (OpenCV), and Matrix Laboratory (MATLAB) platforms. An existing parallel method for Canny approach has been modified further to run in a fully parallel manner. This has been achieved by replacing the breadth- first search procedure with a parallel method. These algorithms have been compared by testing them on a database of optical coherence tomography images. The comparison of results shows that the proposed implementation of the Canny method on GPU using the CUDA platform improves the speed of execution by 2-100× compared to the central processing unit-based implementation using the OpenCV and MATLAB platforms.
Application of imaging technology to improve the laboratory and field compaction of HMA.
DOT National Transportation Integrated Search
2009-04-01
Field compaction of asphalt mixtures is an important process that influences performance of asphalt : pavements. This study evaluates the relationship between different field compaction patterns and the : uniformity of air void distribution in asphal...
Yang, Fan; Paindavoine, M
2003-01-01
This paper describes a real time vision system that allows us to localize faces in video sequences and verify their identity. These processes are image processing techniques based on the radial basis function (RBF) neural network approach. The robustness of this system has been evaluated quantitatively on eight video sequences. We have adapted our model for an application of face recognition using the Olivetti Research Laboratory (ORL), Cambridge, UK, database so as to compare the performance against other systems. We also describe three hardware implementations of our model on embedded systems based on the field programmable gate array (FPGA), zero instruction set computer (ZISC) chips, and digital signal processor (DSP) TMS320C62, respectively. We analyze the algorithm complexity and present results of hardware implementations in terms of the resources used and processing speed. The success rates of face tracking and identity verification are 92% (FPGA), 85% (ZISC), and 98.2% (DSP), respectively. For the three embedded systems, the processing speeds for images size of 288 /spl times/ 352 are 14 images/s, 25 images/s, and 4.8 images/s, respectively.
The role of informatics in patient-centered care and personalized medicine.
Hanna, Matthew G; Pantanowitz, Liron
2017-06-01
The practice of cytopathology has dramatically changed due to advances in genomics and information technology. Cytology laboratories have accordingly become increasingly dependent on pathology informatics support to meet the emerging demands of precision medicine. Pathology informatics deals with information technology in the laboratory, and the impact of this technology on workflow processes and staff who interact with these tools. This article covers the critical role that laboratory information systems, electronic medical records, and digital imaging plays in patient-centered personalized medicine. The value of integrated diagnostic reports, clinical decision support, and the use of whole-slide imaging to better evaluate cytology samples destined for molecular testing is discussed. Image analysis that offers more precise and quantitative measurements in cytology is addressed, as well as the role of bioinformatics tools to cope with Big Data from next-generation sequencing. This article also highlights the barriers to the widespread adoption of these disruptive technologies due to regulatory obstacles, limited commercial solutions, poor interoperability, and lack of standardization. Cancer Cytopathol 2017;125(6 suppl):494-501. © 2017 American Cancer Society. © 2017 American Cancer Society.
Secure Display of Space-Exploration Images
NASA Technical Reports Server (NTRS)
Cheng, Cecilia; Thornhill, Gillian; McAuley, Michael
2006-01-01
Java EDR Display Interface (JEDI) is software for either local display or secure Internet distribution, to authorized clients, of image data acquired from cameras aboard spacecraft engaged in exploration of remote planets. ( EDR signifies experimental data record, which, in effect, signifies image data.) Processed at NASA s Multimission Image Processing Laboratory (MIPL), the data can be from either near-realtime processing streams or stored files. JEDI uses the Java Advanced Imaging application program interface, plus input/output packages that are parts of the Video Image Communication and Retrieval software of the MIPL, to display images. JEDI can be run as either a standalone application program or within a Web browser as a servlet with an applet front end. In either operating mode, JEDI communicates using the HTTP(s) protocol(s). In the Web-browser case, the user must provide a password to gain access. For each user and/or image data type, there is a configuration file, called a "personality file," containing parameters that control the layout of the displays and the information to be included in them. Once JEDI has accepted the user s password, it processes the requested EDR (provided that user is authorized to receive the specific EDR) to create a display according to the user s personality file.
Mercury: Photomosaic of the Michelangelo Quadrangle H-12
NASA Technical Reports Server (NTRS)
2000-01-01
The Michelangelo Quadrangle, which lies in Mercury's southern polar region, was named in memory of the famous Italian artist. The Mercurian surface is heavily marred by numerous impact craters. Ejecta deposits, seen as bright lines or rays, radiate outward from the point of impact, along the planet's surface indicating the source craters are young topographical features. The rays found on Mercury are similar to ones found on the surface of Earth's moon.
Several large lobate scarps, steep and long escarpments which usually show a largely lobate outline on a scale of a few to tens of kilometers, are clearly visible in the lower left side of the image slicing through a variety of terrains including several large impact craters.The Image Processing Lab at NASA's Jet Propulsion Laboratory produced this photomosaic using computer software and techniques developed for use in processing planetary data. The images used to construct the Michelangelo Quadrangle were taken during Mariner 10's second flyby of Mercury.The Mariner 10 spacecraft was launched in 1974. The spacecraft took images of Venus in February 1974 on the way to three encounters with Mercury in March and September 1974 and March 1975. The spacecraft took more than 7,000 images of Mercury, Venus, the Earth and the Moon during its mission. The Mariner 10 Mission was managed by the Jet Propulsion Laboratory for NASA's Office of Space Science in Washington, D.C.NASA Astrophysics Data System (ADS)
Davis, T. M.; Straight, S. D.; Lockwook, R. B.
2008-08-01
Tactical Satellite 3 is an Air Force Research Laboratory Science and Technology (S&T) initiative that explores the capability and technological maturity of small, low-cost satellites. It features a low cost "plug and play" modular bus and low cost militarily significant payloads - a Raytheon developed Hyperspectral imager and secondary payload data exfiltration provided by the Office of Naval Research. In addition to providing for ongoing innovation and demonstration in this important technology area, these S&T efforts also help mitigate technology risk and establish a potential concept of operations for future acquisitions. The key objectives are rapid launch and on-orbit checkout, theater commanding, and near-real time theater data integration. It will also feature a rapid development of the space vehicle and integrated payload and spacecraft bus by using components and processes developed by the satellite modular bus initiative. Planned for a late summer 2008 launch, the TacSat-3 spacecraft will collect and process images and then downlink processed data using a Common Data Link. An in-theater tactical ground station will have the capability to uplink tasking to spacecraft and will receive full data image. An international program, the United Kingdom Defence Science and Technology Laboratory (DSTL) and Australian Defence Science and Technology Organisation (DSTO) plan to participate in TacSat-3 experiments.
Digital image processing and analysis for activated sludge wastewater treatment.
Khan, Muhammad Burhan; Lee, Xue Yong; Nisar, Humaira; Ng, Choon Aun; Yeap, Kim Ho; Malik, Aamir Saeed
2015-01-01
Activated sludge system is generally used in wastewater treatment plants for processing domestic influent. Conventionally the activated sludge wastewater treatment is monitored by measuring physico-chemical parameters like total suspended solids (TSSol), sludge volume index (SVI) and chemical oxygen demand (COD) etc. For the measurement, tests are conducted in the laboratory, which take many hours to give the final measurement. Digital image processing and analysis offers a better alternative not only to monitor and characterize the current state of activated sludge but also to predict the future state. The characterization by image processing and analysis is done by correlating the time evolution of parameters extracted by image analysis of floc and filaments with the physico-chemical parameters. This chapter briefly reviews the activated sludge wastewater treatment; and, procedures of image acquisition, preprocessing, segmentation and analysis in the specific context of activated sludge wastewater treatment. In the latter part additional procedures like z-stacking, image stitching are introduced for wastewater image preprocessing, which are not previously used in the context of activated sludge. Different preprocessing and segmentation techniques are proposed, along with the survey of imaging procedures reported in the literature. Finally the image analysis based morphological parameters and correlation of the parameters with regard to monitoring and prediction of activated sludge are discussed. Hence it is observed that image analysis can play a very useful role in the monitoring of activated sludge wastewater treatment plants.
Mars Orbiter Camera Views the 'Face on Mars' - Comparison with Viking
NASA Technical Reports Server (NTRS)
1998-01-01
Shortly after midnight Sunday morning (5 April 1998 12:39 AM PST), the Mars Orbiter Camera (MOC) on the Mars Global Surveyor (MGS) spacecraft successfully acquired a high resolution image of the 'Face on Mars' feature in the Cydonia region. The image was transmitted to Earth on Sunday, and retrieved from the mission computer data base Monday morning (6 April 1998). The image was processed at the Malin Space Science Systems (MSSS) facility 9:15 AM and the raw image immediately transferred to the Jet Propulsion Laboratory (JPL) for release to the Internet. The images shown here were subsequently processed at MSSS.
The picture was acquired 375 seconds after the spacecraft's 220th close approach to Mars. At that time, the 'Face', located at approximately 40.8o N, 9.6o W, was 275 miles (444 km) from the spacecraft. The 'morning' sun was 25o above the horizon. The picture has a resolution of 14.1 feet (4.3 meters) per pixel, making it ten times higher resolution than the best previous image of the feature, which was taken by the Viking Mission in the mid-1970's. The full image covers an area 2.7 miles (4.4 km) wide and 25.7 miles (41.5 km) long.In this comparison, the best Viking image has been enlarged to 3.3 times its original resolution, and the MOC image has been decreased by a similar 3.3 times, creating images of roughly the same size. In addition, the MOC images have been geometrically transformed to a more overhead projection (different from the mercator map projection of PIA01440 & 1441) for ease of comparison with the Viking image. The left image is a portion of Viking Orbiter 1 frame 070A13, the middle image is a portion of MOC frame shown normally, and the right image is the same MOC frame but with the brightness inverted to simulate the approximate lighting conditions of the Viking image.Processing Image processing has been applied to the images in order to improve the visibility of features. This processing included the following steps: The image was processed to remove the sensitivity differences between adjacent picture elements (calibrated). This removes the vertical streaking. The contrast and brightness of the image was adjusted, and 'filters' were applied to enhance detail at several scales. The image was then geometrically warped to meet the computed position information for a mercator-type map. This corrected for the left-right flip, and the non-vertical viewing angle (about 45o from vertical), but also introduced some vertical 'elongation' of the image for the same reason Greenland looks larger than Africa on a mercator map of the Earth. A section of the image, containing the 'Face' and a couple of nearly impact craters and hills, was 'cut' out of the full image and reproduced separately.See PIA01440-1442 for additional processing steps. Also see PIA01236 for the raw image.Malin Space Science Systems and the California Institute of Technology built the MOC using spare hardware from the Mars Observer mission. MSSS operates the camera from its facilities in San Diego, CA. The Jet Propulsion Laboratory's Mars Surveyor Operations Project operates the Mars Global Surveyor spacecraft with its industrial partner, Lockheed Martin Astronautics, from facilities in Pasadena, CA and Denver, CO.NASA Technical Reports Server (NTRS)
1999-01-01
This brief three-frame movie of the Moon was made from three Cassini narrow-angle images as the spacecraft passed by the Moon on the way to its closest approach with Earth on August 17, 1999. The purpose of this particular set of images was to calibrate the spectral response of the narrow-angle camera and to test its 'on-chip summing mode' data compression technique in flight. From left to right, they show the Moon in the green, blue and ultraviolet regions of the spectrum in 40, 60 and 80 millisecond exposures, respectively. All three images have been scaled so that the brightness of Crisium basin, the dark circular region in the upper right, is the same in each image. The spatial scale in the blue and ultraviolet images is 1.4 miles per pixel (2.3 kilometers). The original scale in the green image (which was captured in the usual manner and then reduced in size by 2x2 pixel summing within the camera system) was 2.8 miles per pixel (4.6 kilometers). It has been enlarged for display to the same scale as the other two. The imaging data were processed and released by the Cassini Imaging Central Laboratory for Operations (CICLOPS) at the University of Arizona's Lunar and Planetary Laboratory, Tucson, AZ. Photo Credit: NASA/JPL/Cassini Imaging Team/University of Arizona Cassini, launched in 1997, is a joint mission of NASA, the European Space Agency and Italian Space Agency. The mission is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Space Science, Washington DC. JPL is a division of the California Institute of Technology, Pasadena, CA.Status of availability of Mariner 9 (1971-051A) TV picture data
NASA Technical Reports Server (NTRS)
1973-01-01
The Mariner 9 TV data that are now available from the National Space Science Data Center are described. Included are the mission test video system pictures, image processing laboratory/reduced data records, mosaics, and journal articles.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
2011-11-01
NREL's new imaging tool could provide manufacturers with insight on their processes. Scientists at the National Renewable Energy Laboratory (NREL) have used capabilities within the Process Development and Integration Laboratory (PDIL) to generate quantitative minority-carrier lifetime maps of multicrystalline silicon (mc-Si) bricks. This feat has been accomplished by using the PDIL's photoluminescence (PL) imaging system in conjunction with transient lifetime measurements obtained using a custom NREL-designed resonance-coupled photoconductive decay (RCPCD) system. PL imaging can obtain rapid high-resolution images that provide a qualitative assessment of the material lifetime-with the lifetime proportional to the pixel intensity. In contrast, the RCPCD technique providesmore » a fast quantitative measure of the lifetime with a lower resolution and penetrates millimeters into the mc-Si brick, providing information on bulk lifetimes and material quality. This technique contrasts with commercially available minority-carrier lifetime mapping systems that use microwave conductivity measurements. Such measurements are dominated by surface recombination and lack information on the material quality within the bulk of the brick. By combining these two complementary techniques, we obtain high-resolution lifetime maps at very fast data acquisition times-attributes necessary for a production-based diagnostic tool. These bulk lifetime measurements provide manufacturers with invaluable feedback on their silicon ingot casting processes. NREL has been applying the PL images of lifetime in mc-Si bricks in collaboration with a U.S. photovoltaic industry partner through Recovery Act Funded Project ARRA T24. NREL developed a new tool to quantitatively map minority-carrier lifetime of multicrystalline silicon bricks by using photoluminescence imaging in conjunction with resonance-coupled photoconductive decay measurements. Researchers are not hindered by surface recombination and can look deeper into the material to map bulk lifetimes. The tool is being applied to silicon bricks in a project collaborating with a U.S. photovoltaic industry partner. Photovoltaic manufacturers can use the NREL tool to obtain valuable feedback on their silicon ingot casting processes.« less
Mars Orbiter Camera Views the 'Face on Mars' - Best View from Viking
NASA Technical Reports Server (NTRS)
1998-01-01
Shortly after midnight Sunday morning (5 April 1998 12:39 AM PST), the Mars Orbiter Camera (MOC) on the Mars Global Surveyor (MGS) spacecraft successfully acquired a high resolution image of the 'Face on Mars' feature in the Cydonia region. The image was transmitted to Earth on Sunday, and retrieved from the mission computer data base Monday morning (6 April 1998). The image was processed at the Malin Space Science Systems (MSSS) facility 9:15 AM and the raw image immediately transferred to the Jet Propulsion Laboratory (JPL) for release to the Internet. The images shown here were subsequently processed at MSSS.
The picture was acquired 375 seconds after the spacecraft's 220th close approach to Mars. At that time, the 'Face', located at approximately 40.8o N, 9.6o W, was 275 miles (444 km) from the spacecraft. The 'morning' sun was 25o above the horizon. The picture has a resolution of 14.1 feet (4.3 meters) per pixel, making it ten times higher resolution than the best previous image of the feature, which was taken by the Viking Mission in the mid-1970's. The full image covers an area 2.7 miles (4.4 km) wide and 25.7 miles (41.5 km) long.This Viking Orbiter image is one of the best Viking pictures of the area Cydonia where the 'Face' is located. Marked on the image are the 'footprint' of the high resolution (narrow angle) Mars Orbiter Camera image and the area seen in enlarged views (dashed box). See PIA01440-1442 for these images in raw and processed form.Malin Space Science Systems and the California Institute of Technology built the MOC using spare hardware from the Mars Observer mission. MSSS operates the camera from its facilities in San Diego, CA. The Jet Propulsion Laboratory's Mars Surveyor Operations Project operates the Mars Global Surveyor spacecraft with its industrial partner, Lockheed Martin Astronautics, from facilities in Pasadena, CA and Denver, CO.High Resolution Near Real Time Image Processing and Support for MSSS Modernization
NASA Astrophysics Data System (ADS)
Duncan, R. B.; Sabol, C.; Borelli, K.; Spetka, S.; Addison, J.; Mallo, A.; Farnsworth, B.; Viloria, R.
2012-09-01
This paper describes image enhancement software applications engineering development work that has been performed in support of Maui Space Surveillance System (MSSS) Modernization. It also includes R&D and transition activity that has been performed over the past few years with the objective of providing increased space situational awareness (SSA) capabilities. This includes Air Force Research Laboratory (AFRL) use of an FY10 Dedicated High Performance Investment (DHPI) cluster award -- and our selection and planned use for an FY12 DHPI award. We provide an introduction to image processing of electro optical (EO) telescope sensors data; and a high resolution image enhancement and near real time processing and summary status overview. We then describe recent image enhancement applications development and support for MSSS Modernization, results to date, and end with a discussion of desired future development work and conclusions. Significant improvements to image processing enhancement have been realized over the past several years, including a key application that has realized more than a 10,000-times speedup compared to the original R&D code -- and a greater than 72-times speedup over the past few years. The latest version of this code maintains software efficiency for post-mission processing while providing optimization for image processing of data from a new EO sensor at MSSS. Additional work has also been performed to develop low latency, near real time processing of data that is collected by the ground-based sensor during overhead passes of space objects.
Outcrop-scale imaging spectroscopy of the Haughton impact structure, Canada
NASA Astrophysics Data System (ADS)
Greenberger, R. N.; Ehlmann, B. L.; Osinski, G. R.; Tornabene, L. L.; Green, R. O.
2016-12-01
Field-portable imaging spectrometers are a novel tool to study heterogeneous deposits such as those found at impact structures. Laboratory imaging spectroscopy of samples from the Haughton impact structure, Devon Island, Nunavut, Canada, detects and maps a variety of minerals within hand samples including calcite, dolomite, hydrated silica, gypsum, garnet, and iron oxides and sulfates. Many of these minerals originate from the target rock lithologies (e.g., limestone, dolostone, sandstone, gneiss) that have been shocked, altered, and displaced. An intimate mixture of quenched melts of calcite and hydrated silica is indicative of the melt rock matrix and is a byproduct of the impact process. Based on these preliminary results, we conducted a field campaign in Summer 2016 at the Haughton structure using imaging spectroscopy on the ground to study and quantify outcrops of impact-disrupted materials around the structure. Key questions addressed include (1) to what extent are the different impact-disrupted/exposed target lithologies from discrete stratigraphic units homogenized during impact processes, (2) what single or mixed lithologies are we able to detect, and (3) is variability within the target lithologies observable within the impactites? The Haughton impact structure is an ideal location to address these questions due to its excellent preservation and the nearly flat-lying, undeformed target rocks. We will present results from the field campaign along with supporting laboratory analyses. The results have implications for our understanding of impact processes and interpretation of planetary remote sensing datasets.
Acquisition and Post-Processing of Immunohistochemical Images.
Sedgewick, Jerry
2017-01-01
Augmentation of digital images is almost always a necessity in order to obtain a reproduction that matches the appearance of the original. However, that augmentation can mislead if it is done incorrectly and not within reasonable limits. When procedures are in place for insuring that originals are archived, and image manipulation steps reported, scientists not only follow good laboratory practices, but avoid ethical issues associated with post processing, and protect their labs from any future allegations of scientific misconduct. Also, when procedures are in place for correct acquisition of images, the extent of post processing is minimized or eliminated. These procedures include white balancing (for brightfield images), keeping tonal values within the dynamic range of the detector, frame averaging to eliminate noise (typically in fluorescence imaging), use of the highest bit depth when a choice is available, flatfield correction, and archiving of the image in a non-lossy format (not JPEG).When post-processing is necessary, the commonly used applications for correction include Photoshop, and ImageJ, but a free program (GIMP) can also be used. Corrections to images include scaling the bit depth to higher and lower ranges, removing color casts from brightfield images, setting brightness and contrast, reducing color noise, reducing "grainy" noise, conversion of pure colors to grayscale, conversion of grayscale to colors typically used in fluorescence imaging, correction of uneven illumination (flatfield correction), merging color images (fluorescence), and extending the depth of focus. These corrections are explained in step-by-step procedures in the chapter that follows.
Molecular Imaging of Influenza and Other Emerging Respiratory Viral Infections
Lawler, James; Paragas, Jason; Jahrling, Peter B.; Mollura, Daniel J.
2011-01-01
Research on the pathogenesis and therapy of influenza and other emerging respiratory viral infections would be aided by methods that directly visualize pathophysiologic processes in patients and laboratory animals. At present, imaging of diseases, such as swine-origin H1N1 influenza, is largely restricted to chest radiograph and computed tomography (CT), which can detect pulmonary structural changes in severely ill patients but are more limited in characterizing the early stages of illness, differentiating inflammation from infection or tracking immune responses. In contrast, imaging modalities, such as positron emission tomography, single photon emission CT, magnetic resonance imaging, and bioluminescence imaging, which have become useful tools for investigating the pathogenesis of a range of disease processes, could be used to advance in vivo studies of respiratory viral infections in patients and animals. Molecular techniques might also be used to identify novel biomarkers of disease progression and to evaluate new therapies. PMID:21422476
Solid Modeling at the US Army Ballistic Research Laboratory
1984-10-01
Corresponding GIFT -Processed Picture 17 10a CRT Image After Editing Process has been Completed 17 10b The Resulting GIFT -Processed Pictures 17 11 Example of...of an editing session. Figure 9b shows the corresponding file when processed by a batch program known as GIFT8.9 GIFT is used not only to generate...These two operations would entail at most a few minutes of time to accomplish. Figure 10b gives the GIFT -processed view of the edited vehicle. It
Portable laser speckle perfusion imaging system based on digital signal processor.
Tang, Xuejun; Feng, Nengyun; Sun, Xiaoli; Li, Pengcheng; Luo, Qingming
2010-12-01
The ability to monitor blood flow in vivo is of major importance in clinical diagnosis and in basic researches of life science. As a noninvasive full-field technique without the need of scanning, laser speckle contrast imaging (LSCI) is widely used to study blood flow with high spatial and temporal resolution. Current LSCI systems are based on personal computers for image processing with large size, which potentially limit the widespread clinical utility. The need for portable laser speckle contrast imaging system that does not compromise processing efficiency is crucial in clinical diagnosis. However, the processing of laser speckle contrast images is time-consuming due to the heavy calculation for enormous high-resolution image data. To address this problem, a portable laser speckle perfusion imaging system based on digital signal processor (DSP) and the algorithm which is suitable for DSP is described. With highly integrated DSP and the algorithm, we have markedly reduced the size and weight of the system as well as its energy consumption while preserving the high processing speed. In vivo experiments demonstrate that our portable laser speckle perfusion imaging system can obtain blood flow images at 25 frames per second with the resolution of 640 × 480 pixels. The portable and lightweight features make it capable of being adapted to a wide variety of application areas such as research laboratory, operating room, ambulance, and even disaster site.
NASA Astrophysics Data System (ADS)
Swartz, Charles S.
2003-05-01
The process of distributing and exhibiting a motion picture has changed little since the Lumière brothers presented the first motion picture to an audience in 1895. While this analog photochemical process is capable of producing screen images of great beauty and expressive power, more often the consumer experience is diminished by third generation prints and by the wear and tear of the mechanical process. Furthermore, the film industry globally spends approximately $1B annually manufacturing and shipping prints. Alternatively, distributing digital files would theoretically yield great benefits in terms of image clarity and quality, lower cost, greater security, and more flexibility in the cinema (e.g., multiple language versions). In order to understand the components of the digital cinema chain and evaluate the proposed technical solutions, the Entertainment Technology Center at USC in 2000 established the Digital Cinema Laboratory as a critical viewing environment, with the highest quality film and digital projection equipment. The presentation describes the infrastructure of the Lab, test materials, and testing methodologies developed for compression evaluation, and lessons learned up to the present. In addition to compression, the Digital Cinema Laboratory plans to evaluate other components of the digital cinema process as well.
Image Processing for Educators in Global Hands-On Universe
NASA Astrophysics Data System (ADS)
Miller, J. P.; Pennypacker, C. R.; White, G. L.
2006-08-01
A method of image processing to find time-varying objects is being developed for the National Virtual Observatory as part of Global Hands-On Universe(tm) (Lawrence Hall of Science; University of California, Berkeley). Objects that vary in space or time are of prime importance in modern astronomy and astrophysics. Such objects include active galactic nuclei, variable stars, supernovae, or moving objects across a field of view such as an asteroid, comet, or extrasolar planet transiting its parent star. The search for these objects is undertaken by acquiring an image of the region of the sky where they occur followed by a second image taken at a later time. Ideally, both images are taken with the same telescope using the same filter and charge-coupled device. The two images are aligned and subtracted with the subtracted image revealing any changes in light during the time period between the two images. We have used a method of Christophe Alard using the image processing software IDL Version 6.2 (Research Systems, Inc.) with the exception of the background correction, which is done on the two images prior to the subtraction. Testing has been extensive, using images provided by a number of National Virtual Observatory and collaborating projects. They include the Supernovae Trace Cosmic Expansion (Cerro Tololo Inter-American Observatory), Supernovae/ Acceleration Program (Lawrence Berkeley National Laboratory), Lowell Observatory Near-Earth Object Search (Lowell Observatory), and the Centre National de la Recherche Scientifique (Paris, France). Further testing has been done with students, including a May 2006 two week program at the Lawrence Berkeley National Laboratory. Students from Hardin-Simmons University (Abilene, TX) and Jackson State University (Jackson, MS) used the subtraction method to analyze images from the Cerro Tololo Inter-American Observatory (CTIO) searching for new asteroids and Kuiper Belt objects. In October 2006 students from five U.S. high schools will use the subtraction method in an asteroid search campaign using CTIO images with 7-day follow-up images to be provided by the Las Cumbres Observatory (Santa Barbara, CA). During the Spring 2006 semester, students from Cape Fear High School used the method to search for near-Earth objects and supernovae. Using images from the Astronomical Research Institute (Charleston, IL) the method contributed to the original discovery of two supernovae, SN 2006al and SN 2006bi.
Venus - Global View Centered at 180 degrees
1996-11-26
This global view of the surface of Venus is centered at 180 degrees east longitude. Magellan synthetic aperture radar mosaics from the first cycle of Magellan mapping, and a 5 degree latitude-longitude grid, are mapped onto a computer-simulated globe to create this image. Data gaps are filled with Pioneer-Venus Orbiter data, or a constant mid-range value. The image was produced by the Solar System Visualization project and the Magellan Science team at the JPL Multimission Image Processing Laboratory. http://photojournal.jpl.nasa.gov/catalog/PIA00478
NASA Astrophysics Data System (ADS)
Guha, Arindam; Singh, Vivek Kr.; Parveen, Reshma; Kumar, K. Vinod; Jeyaseelan, A. T.; Dhanamjaya Rao, E. N.
2013-04-01
Bauxite deposits of Jharkhand in India are resulted from the lateritization process and therefore are often associated with the laterites. In the present study, ASTER (Advanced Space borne Thermal Emission and Reflection Radiometer) image is processed to delineate bauxite rich pockets within the laterites. In this regard, spectral signatures of lateritic bauxite samples are analyzed in the laboratory with reference to the spectral features of gibbsite (main mineral constituent of bauxite) and goethite (main mineral constituent of laterite) in VNIR-SWIR (visible-near infrared and short wave infrared) electromagnetic domain. The analysis of spectral signatures of lateritic bauxite samples helps in understanding the differences in the spectral features of bauxites and laterites. Based on these differences; ASTER data based relative band depth and simple ratio images are derived for spatial mapping of the bauxites developed within the lateritic province. In order to integrate the complementary information of different index image, an index based principal component (IPC) image is derived to incorporate the correlative information of these indices to delineate bauxite rich pockets. The occurrences of bauxite rich pockets derived from density sliced IPC image are further delimited by the topographic controls as it has been observed that the major bauxite occurrences of the area are controlled by slope and altitude. In addition to above, IPC image is draped over the digital elevation model (DEM) to illustrate how bauxite rich pockets are distributed with reference to the topographic variability of the terrain. Bauxite rich pockets delineated in the IPC image are also validated based on the known mine occurrences and existing geological map of the bauxite. It is also conceptually validated based on the spectral similarity of the bauxite pixels delineated in the IPC image with the ASTER convolved laboratory spectra of bauxite samples.
NIMS: hotspots on Io during G2 (continued)
NASA Technical Reports Server (NTRS)
1997-01-01
This is another Near Infrared Mapping Spectrometer (NIMS) image of Io, taken during the G2 encounter in September 1996. This is a dayside image of Io (on the right) against the clouds of Jupiter (the blue background). On the left is a Voyager mosaic of Io with the same viewing geometry for comparison purposes. This NIMS data set has been processed to highlight the positions of hot spots on the surface of Io. At least 11 can be seen. Two of the hotspots are newly discovered by the NIMS instrument. Others correspond to sites of plume eruptions and volcanic calderas and volcanic flows. This image can be compared with the SSI image P-47971 released on October 23, 1996, which was taken almost exactly the same position.
The Jet Propulsion Laboratory, Pasadena, CA manages the mission for NASA's Office of Space Science, Washington, DC.The Jet Propulsion Laboratory, Pasadena, CA manages the mission for NASA's Office of Space Science, Washington, DC.This image and other images and data received from Galileo are posted on the World Wide Web, on the Galileo mission home page at URL http://galileo.jpl.nasa.gov.Volume Segmentation and Ghost Particles
NASA Astrophysics Data System (ADS)
Ziskin, Isaac; Adrian, Ronald
2011-11-01
Volume Segmentation Tomographic PIV (VS-TPIV) is a type of tomographic PIV in which images of particles in a relatively thick volume are segmented into images on a set of much thinner volumes that may be approximated as planes, as in 2D planar PIV. The planes of images can be analysed by standard mono-PIV, and the volume of flow vectors can be recreated by assembling the planes of vectors. The interrogation process is similar to a Holographic PIV analysis, except that the planes of image data are extracted from two-dimensional camera images of the volume of particles instead of three-dimensional holographic images. Like the tomographic PIV method using the MART algorithm, Volume Segmentation requires at least two cameras and works best with three or four. Unlike the MART method, Volume Segmentation does not require reconstruction of individual particle images one pixel at a time and it does not require an iterative process, so it operates much faster. As in all tomographic reconstruction strategies, ambiguities known as ghost particles are produced in the segmentation process. The effect of these ghost particles on the PIV measurement is discussed. This research was supported by Contract 79419-001-09, Los Alamos National Laboratory.
A thesis on the Development of an Automated SWIFT Edge Detection Algorithm
DOE Office of Scientific and Technical Information (OSTI.GOV)
Trujillo, Christopher J.
Throughout the world, scientists and engineers such as those at Los Alamos National Laboratory, perform research and testing unique only to applications aimed towards advancing technology, and understanding the nature of materials. With this testing, comes a need for advanced methods of data acquisition and most importantly, a means of analyzing and extracting the necessary information from such acquired data. In this thesis, I aim to produce an automated method implementing advanced image processing techniques and tools to analyze SWIFT image datasets for Detonator Technology at Los Alamos National Laboratory. Such an effective method for edge detection and point extractionmore » can prove to be advantageous in analyzing such unique datasets and provide for consistency in producing results.« less
Compact time- and space-integrating SAR processor: design and development status
NASA Astrophysics Data System (ADS)
Haney, Michael W.; Levy, James J.; Christensen, Marc P.; Michael, Robert R., Jr.; Mock, Michael M.
1994-06-01
Progress toward a flight demonstration of the acousto-optic time- and space- integrating real-time SAR image formation processor program is reported. The concept overcomes the size and power consumption limitations of electronic approaches by using compact, rugged, and low-power analog optical signal processing techniques for the most computationally taxing portions of the SAR imaging problem. Flexibility and performance are maintained by the use of digital electronics for the critical low-complexity filter generation and output image processing functions. The results reported include tests of a laboratory version of the concept, a description of the compact optical design that will be implemented, and an overview of the electronic interface and controller modules of the flight-test system.
Soft-Tissue Infections and Their Imaging Mimics: From Cellulitis to Necrotizing Fasciitis.
Hayeri, Mohammad Reza; Ziai, Pouya; Shehata, Monda L; Teytelboym, Oleg M; Huang, Brady K
2016-10-01
Infection of the musculoskeletal system can be associated with high mortality and morbidity if not promptly and accurately diagnosed. These infections are generally diagnosed and managed clinically; however, clinical and laboratory findings sometimes lack sensitivity and specificity, and a definite diagnosis may not be possible. In uncertain situations, imaging is frequently performed to confirm the diagnosis, evaluate the extent of the disease, and aid in treatment planning. In particular, cross-sectional imaging, including computed tomography and magnetic resonance imaging, provides detailed anatomic information in the evaluation of soft tissues due to their inherent high spatial and contrast resolution. Imaging findings of soft-tissue infections can be nonspecific and can have different appearances depending on the depth and anatomic extent of tissue involvement. Although many imaging features of infectious disease can overlap with noninfectious processes, imaging can help establish the diagnosis when combined with the clinical history and laboratory findings. Radiologists should be familiar with the spectrum of imaging findings of soft-tissue infections to better aid the referring physician in managing these patients. The aim of this article is to review the spectrum of soft-tissue infections using a systematic anatomic compartment approach. We discuss the clinical features of soft-tissue infections, their imaging findings with emphasis on cross-sectional imaging, their potential mimics, and clinical management. © RSNA, 2016.
Post-processing images from the WFIRST-AFTA coronagraph testbed
NASA Astrophysics Data System (ADS)
Zimmerman, Neil T.; Ygouf, Marie; Pueyo, Laurent; Soummer, Remi; Perrin, Marshall D.; Mennesson, Bertrand; Cady, Eric; Mejia Prada, Camilo
2016-01-01
The concept for the exoplanet imaging instrument on WFIRST-AFTA relies on the development of mission-specific data processing tools to reduce the speckle noise floor. No instruments have yet functioned on the sky in the planet-to-star contrast regime of the proposed coronagraph (1E-8). Therefore, starlight subtraction algorithms must be tested on a combination of simulated and laboratory data sets to give confidence that the scientific goals can be reached. The High Contrast Imaging Testbed (HCIT) at Jet Propulsion Lab has carried out several technology demonstrations for the instrument concept, demonstrating 1E-8 raw (absolute) contrast. Here, we have applied a mock reference differential imaging strategy to HCIT data sets, treating one subset of images as a reference star observation and another subset as a science target observation. We show that algorithms like KLIP (Karhunen-Loève Image Projection), by suppressing residual speckles, enable the recovery of exoplanet signals at contrast of order 2E-9.
Opportunity on 'Cabo Frio' (Simulated)
NASA Technical Reports Server (NTRS)
2006-01-01
This image superimposes an artist's concept of the Mars Exploration Rover Opportunity atop the 'Cabo Frio' promontory on the rim of 'Victoria Crater' in the Meridiani Planum region of Mars. It is done to give a sense of scale. The underlying image was taken by Opportunity's panoramic camera during the rover's 952nd Martian day, or sol (Sept. 28, 2006). This synthetic image of NASA's Opportunity Mars Exploration Rover at Victoria Crater was produced using 'Virtual Presence in Space' technology. Developed at NASA's Jet Propulsion Laboratory, Pasadena, Calif., this technology combines visualization and image processing tools with Hollywood-style special effects. The image was created using a photorealistic model of the rover and an approximately full-color mosaic.Lab-X-ray multidimensional imaging of processes inside porous media
NASA Astrophysics Data System (ADS)
Godinho, Jose
2017-04-01
Time-lapse and other multidimensional X-ray imaging techniques have mostly been applied using synchrotron radiation, which limits accessibility and complicates data analysis. Here, we present new time-lapse imaging approaches using laboratory X-ray computed microtomography (CT) to study transformations inside porous media. Specifically, three methods will be presented: 1) Quantitative time-lapse radiography to study sub-second processes. For example to study the penetration of particles into fractures and pores, which is essential to understand how proppants keep fractures opened during hydraulic fracturing and how filter cakes form during borehole drilling. 2) Combination of time-lapse CT with diffraction tomography to study the transformation between bio-inspired polymorphs in 6D, e.g. mineral phase transformation between ACC, Vaterite and Calcite - CaCO3, and between ACS, Anhydrite and Gypsum - CaSO4. Crystals can be resolved in nanopores down to 7 nm (over 100 times smaller than the resolution of CT), which allows studying the effect of confinement on phase stability and growth rates. 3) Fast iterative helical micro-CT scanning to study samples of high ratio height to width (e.g. long cores) with optimal resolution. Here we show how this can be useful to study the distribution of the products from fluid-mediated mineral reactions throughout longer reaction paths and more representative volumes. Using state of the art reconstruction algorithms allows reducing the scanning times from over ten hours to below two hours enabling time-lapse studies. It is expected that these new techniques will open new possibilities for time-lapse imaging of a wider range of geological processes using laboratory X-ray CT, thereby increasing the accessibility of multidimensional imaging to a larger number of users and applications in geology.
SIP: A Web-Based Astronomical Image Processing Program
NASA Astrophysics Data System (ADS)
Simonetti, J. H.
1999-12-01
I have written an astronomical image processing and analysis program designed to run over the internet in a Java-compatible web browser. The program, Sky Image Processor (SIP), is accessible at the SIP webpage (http://www.phys.vt.edu/SIP). Since nothing is installed on the user's machine, there is no need to download upgrades; the latest version of the program is always instantly available. Furthermore, the Java programming language is designed to work on any computer platform (any machine and operating system). The program could be used with students in web-based instruction or in a computer laboratory setting; it may also be of use in some research or outreach applications. While SIP is similar to other image processing programs, it is unique in some important respects. For example, SIP can load images from the user's machine or from the Web. An instructor can put images on a web server for students to load and analyze on their own personal computer. Or, the instructor can inform the students of images to load from any other web server. Furthermore, since SIP was written with students in mind, the philosophy is to present the user with the most basic tools necessary to process and analyze astronomical images. Images can be combined (by addition, subtraction, multiplication, or division), multiplied by a constant, smoothed, cropped, flipped, rotated, and so on. Statistics can be gathered for pixels within a box drawn by the user. Basic tools are available for gathering data from an image which can be used for performing simple differential photometry, or astrometry. Therefore, students can learn how astronomical image processing works. Since SIP is not part of a commercial CCD camera package, the program is written to handle the most common denominator image file, the FITS format.
TerraLook: GIS-Ready Time-Series of Satellite Imagery for Monitoring Change
,
2008-01-01
TerraLook is a joint project of the U.S. Geological Survey (USGS) and the National Aeronautics and Space Administration (NASA) Jet Propulsion Laboratory (JPL) with a goal of providing satellite images that anyone can use to see changes in the Earth's surface over time. Each TerraLook product is a user-specified collection of satellite images selected from imagery archived at the USGS Earth Resources Observation and Science (EROS) Center. Images are bundled with standards-compliant metadata, a world file, and an outline of each image's ground footprint, enabling their use in geographic information systems (GIS), image processing software, and Web mapping applications. TerraLook images are available through the USGS Global Visualization Viewer (http://glovis.usgs.gov).
How Phoenix Creates Color Images (Animation)
NASA Technical Reports Server (NTRS)
2008-01-01
[figure removed for brevity, see original site] Click on image for animation This simple animation shows how a color image is made from images taken by Phoenix. The Surface Stereo Imager captures the same scene with three different filters. The images are sent to Earth in black and white and the color is added by mission scientists. By contrast, consumer digital cameras and cell phones have filters built in and do all of the color processing within the camera itself. The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASAaE(TM)s Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.Interfacing laboratory instruments to multiuser, virtual memory computers
NASA Technical Reports Server (NTRS)
Generazio, Edward R.; Stang, David B.; Roth, Don J.
1989-01-01
Incentives, problems and solutions associated with interfacing laboratory equipment with multiuser, virtual memory computers are presented. The major difficulty concerns how to utilize these computers effectively in a medium sized research group. This entails optimization of hardware interconnections and software to facilitate multiple instrument control, data acquisition and processing. The architecture of the system that was devised, and associated programming and subroutines are described. An example program involving computer controlled hardware for ultrasonic scan imaging is provided to illustrate the operational features.
Brain imaging registry for neurologic diagnosis and research
NASA Astrophysics Data System (ADS)
Hoo, Kent S., Jr.; Wong, Stephen T. C.; Knowlton, Robert C.; Young, Geoffrey S.; Walker, John; Cao, Xinhua; Dillon, William P.; Hawkins, Randall A.; Laxer, Kenneth D.
2002-05-01
The purpose of this paper is to demonstrate the importance of building a brain imaging registry (BIR) on top of existing medical information systems including Picture Archiving Communication Systems (PACS) environment. We describe the design framework for a cluster of data marts whose purpose is to provide clinicians and researchers efficient access to a large volume of raw and processed patient images and associated data originating from multiple operational systems over time and spread out across different hospital departments and laboratories. The framework is designed using object-oriented analysis and design methodology. The BIR data marts each contain complete image and textual data relating to patients with a particular disease.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Rosch, R.; Tanenbaum, D. M.; Jrgensen, M.
2012-04-01
The investigation of degradation of seven distinct sets (with a number of individual cells of n {>=} 12) of state of the art organic photovoltaic devices prepared by leading research laboratories with a combination of imaging methods is reported. All devices have been shipped to and degraded at Riso DTU up to 1830 hours in accordance with established ISOS-3 protocols under defined illumination conditions. Imaging of device function at different stages of degradation was performed by laser-beam induced current (LBIC) scanning; luminescence imaging, specifically photoluminescence (PLI) and electroluminescence (ELI); as well as by lock-in thermography (LIT). Each of the imagingmore » techniques exhibits its specific advantages with respect to sensing certain degradation features, which will be compared and discussed here in detail. As a consequence, a combination of several imaging techniques yields very conclusive information about the degradation processes controlling device function. The large variety of device architectures in turn enables valuable progress in the proper interpretation of imaging results -- hence revealing the benefits of this large scale cooperation in making a step forward in the understanding of organic solar cell aging and its interpretation by state-of-the-art imaging methods.« less
DOE Office of Scientific and Technical Information (OSTI.GOV)
Germack D.; Rosch, R.; Tanenbaum, D.M.
2012-04-01
The investigation of degradation of seven distinct sets (with a number of individual cells of n {ge} 12) of state of the art organic photovoltaic devices prepared by leading research laboratories with a combination of imaging methods is reported. All devices have been shipped to and degraded at Risoe DTU up to 1830 hours in accordance with established ISOS-3 protocols under defined illumination conditions. Imaging of device function at different stages of degradation was performed by laser-beam induced current (LBIC) scanning; luminescence imaging, specifically photoluminescence (PLI) and electroluminescence (ELI); as well as by lock-in thermography (LIT). Each of the imagingmore » techniques exhibits its specific advantages with respect to sensing certain degradation features, which will be compared and discussed here in detail. As a consequence, a combination of several imaging techniques yields very conclusive information about the degradation processes controlling device function. The large variety of device architectures in turn enables valuable progress in the proper interpretation of imaging results - hence revealing the benefits of this large scale cooperation in making a step forward in the understanding of organic solar cell aging and its interpretation by state-of-the-art imaging methods.« less
Micro-CT images reconstruction and 3D visualization for small animal studying
NASA Astrophysics Data System (ADS)
Gong, Hui; Liu, Qian; Zhong, Aijun; Ju, Shan; Fang, Quan; Fang, Zheng
2005-01-01
A small-animal x-ray micro computed tomography (micro-CT) system has been constructed to screen laboratory small animals and organs. The micro-CT system consists of dual fiber-optic taper-coupled CCD detectors with a field-of-view of 25x50 mm2, a microfocus x-ray source, a rotational subject holder. For accurate localization of rotation center, coincidence between the axis of rotation and centre of image was studied by calibration with a polymethylmethacrylate cylinder. Feldkamp"s filtered back-projection cone-beam algorithm is adopted for three-dimensional reconstruction on account of the effective corn-beam angle is 5.67° of the micro-CT system. 200x1024x1024 matrix data of micro-CT is obtained with the magnification of 1.77 and pixel size of 31x31μm2. In our reconstruction software, output image size of micro-CT slices data, magnification factor and rotation sample degree can be modified in the condition of different computational efficiency and reconstruction region. The reconstructed image matrix data is processed and visualization by Visualization Toolkit (VTK). Data parallelism of VTK is performed in surface rendering of reconstructed data in order to improve computing speed. Computing time of processing a 512x512x512 matrix datasets is about 1/20 compared with serial program when 30 CPU is used. The voxel size is 54x54x108 μm3. The reconstruction and 3-D visualization images of laboratory rat ear are presented.
NASA Technical Reports Server (NTRS)
Palmer, David; Prince, Thomas A.
1987-01-01
A laboratory imaging system has been developed to study the use of Fourier-transform techniques in high-resolution hard X-ray and gamma-ray imaging, with particular emphasis on possible applications to high-energy astronomy. Considerations for the design of a Fourier-transform imager and the instrumentation used in the laboratory studies is described. Several analysis methods for image reconstruction are discussed including the CLEAN algorithm and maximum entropy methods. Images obtained using these methods are presented.
The Engineer Topographic Laboratories /ETL/ hybrid optical/digital image processor
NASA Astrophysics Data System (ADS)
Benton, J. R.; Corbett, F.; Tuft, R.
1980-01-01
An optical-digital processor for generalized image enhancement and filtering is described. The optical subsystem is a two-PROM Fourier filter processor. Input imagery is isolated, scaled, and imaged onto the first PROM; this input plane acts like a liquid gate and serves as an incoherent-to-coherent converter. The image is transformed onto a second PROM which also serves as a filter medium; filters are written onto the second PROM with a laser scanner in real time. A solid state CCTV camera records the filtered image, which is then digitized and stored in a digital image processor. The operator can then manipulate the filtered image using the gray scale and color remapping capabilities of the video processor as well as the digital processing capabilities of the minicomputer.
Art, outreach and geopattern formation
NASA Astrophysics Data System (ADS)
Morris, S. W.; Chen, A. S. H.; Rogers, M. C.; Goehring, L.
2014-12-01
For the past several years, I have been exhibiting images and videos of natural and laboratory geopatterns in art galleries and outdoor shows. I have also brought artists into my research lab for hands-on workshops. My experience shows that scientific images can be well received as art and generate wide-ranging discussions across traditionally separate disciplines. The art world offers an interesting new venue for outreach activities, as well as being a lot of fun to explore. Artists Statement:I am interested in self-organized, emergent patterns and textures. I take photos of patterns both from the natural world and of experiments in my laboratory in the department of Physics at the University of Toronto. Patterns naturally attract casual attention but are also the subject of serious scientific research. Some things just evolve all by themselves into strikingly regular shapes and textures. Why? These shapes emerge spontaneously from a dynamic process of growing, folding, cracking, wrinkling, branching, flowing and other kinds of morphological development. My photos are informed by the scientific aesthetic of nonlinear physics, and mathematics lurks behind every image for those who know where to look for it. But no special knowledge is required to appreciate the results. Each image shows an object, sometimes quite small and often familiar, with a self-composed regular structure. Some images are from laboratory physics experiments and some are from Nature, and all celebrate the subtle interplay of order and complexity in emergent patterns.
The Airborne Visible / Infrared Imaging Spectrometer AVIS: Design, Characterization and Calibration.
Oppelt, Natascha; Mauser, Wolfram
2007-09-14
The Airborne Visible / Infrared imaging Spectrometer AVIS is a hyperspectralimager designed for environmental monitoring purposes. The sensor, which wasconstructed entirely from commercially available components, has been successfullydeployed during several experiments between 1999 and 2007. We describe the instrumentdesign and present the results of laboratory characterization and calibration of the system'ssecond generation, AVIS-2, which is currently being operated. The processing of the datais described and examples of remote sensing reflectance data are presented.
NASA Astrophysics Data System (ADS)
Kulenkampff, Johannes; Zakhnini, Abdelhamid; Gründig, Marion; Lippmann-Pipke, Johanna
2016-08-01
Clay plays a prominent role as barrier material in the geosphere. The small particle sizes cause extremely small pore sizes and induce low permeability and high sorption capacity. Transport of dissolved species by molecular diffusion, driven only by a concentration gradient, is less sensitive to the pore size. Heterogeneous structures on the centimetre scale could cause heterogeneous effects, like preferential transport zones, which are difficult to assess. Laboratory measurements with diffusion cells yield limited information on heterogeneity, and pore space imaging methods have to consider scale effects. We established positron emission tomography (PET), applying a high-resolution PET scanner as a spatially resolved quantitative method for direct laboratory observation of the molecular diffusion process of a PET tracer on the prominent scale of 1-100 mm. Although PET is rather insensitive to bulk effects, quantification required significant improvements of the image reconstruction procedure with respect to Compton scatter and attenuation. The experiments were conducted with 22Na and 124I over periods of 100 and 25 days, respectively. From the images we derived trustable anisotropic diffusion coefficients and, in addition, we identified indications of preferential transport zones. We thus demonstrated the unique potential of the PET imaging modality for geoscientific process monitoring under conditions where other methods fail, taking advantage of the extremely high detection sensitivity that is typical of radiotracer applications.
Karunakaran, Chithra; Lahlali, Rachid; Zhu, Ning; Webb, Adam M.; Schmidt, Marina; Fransishyn, Kyle; Belev, George; Wysokinski, Tomasz; Olson, Jeremy; Cooper, David M. L.; Hallin, Emil
2015-01-01
Minimally invasive investigation of plant parts (root, stem, leaves, and flower) has good potential to elucidate the dynamics of plant growth, morphology, physiology, and root-rhizosphere interactions. Laboratory based absorption X-ray imaging and computed tomography (CT) systems are extensively used for in situ feasibility studies of plants grown in natural and artificial soil. These techniques have challenges such as low contrast between soil pore space and roots, long X-ray imaging time, and low spatial resolution. In this study, the use of synchrotron (SR) based phase contrast X-ray imaging (PCI) has been demonstrated as a minimally invasive technique for imaging plants. Above ground plant parts and roots of 10 day old canola and wheat seedlings grown in sandy clay loam soil were successfully scanned and reconstructed. Results confirmed that SR-PCI can deliver good quality images to study dynamic and real time processes such as cavitation and water-refilling in plants. The advantages of SR-PCI, effect of X-ray energy, and effective pixel size to study plant samples have been demonstrated. The use of contrast agents to monitor physiological processes in plants was also investigated and discussed. PMID:26183486
Color image analysis of contaminants and bacteria transport in porous media
NASA Astrophysics Data System (ADS)
Rashidi, Mehdi; Dehmeshki, Jamshid; Daemi, Mohammad F.; Cole, Larry; Dickenson, Eric
1997-10-01
Transport of contaminants and bacteria in aqueous heterogeneous saturated porous systems have been studied experimentally using a novel fluorescent microscopic imaging technique. The approach involves color visualization and quantification of bacterium and contaminant distributions within a transparent porous column. By introducing stained bacteria and an organic dye as a contaminant into the column and illuminating the porous regions with a planar sheet of laser beam, contaminant and bacterial transport processes through the porous medium can be observed and measured microscopically. A computer controlled color CCD camera is used to record the fluorescent images as a function of time. These images are recorded by a frame accurate high resolution VCR and are then analyzed using a color image analysis code written in our laboratories. The color images are digitized this way and simultaneous concentration and velocity distributions of both contaminant and bacterium are evaluated as a function of time and pore characteristics. The approach provides a unique dynamic probe to observe these transport processes microscopically. These results are extremely valuable in in-situ bioremediation problems since microscopic particle-contaminant- bacterium interactions are the key to understanding and optimization of these processes.
Faulkner, Jonathan; Hu, Bill X; Kish, Stephen; Hua, Fei
2009-11-03
New mathematical and laboratory methods have been developed for simulating groundwater flow and solute transport in karst aquifers having conduits imbedded in a porous medium, such as limestone. The Stokes equations are used to model the flow in the conduits and the Darcy equation is used for the flow in the matrix. The Beavers-Joseph interface boundary conditions are adopted to describe the flow exchange at the interface boundary between the two domains. A laboratory analog is used to simulate the conduit and matrix domains of a karst aquifer. The conduit domain is located at the bottom of the transparent plexiglas laboratory analog and glass beads occupy the remaining space to represent the matrix domain. Water flows into and out of the two domains separately and each has its own supply and outflow reservoirs. Water and solute are exchanged through an interface between the two domains. Pressure transducers located within the matrix and conduit domains of the analog provide data that is processed and stored in digital format. Dye tracing experiments are recorded using time-lapse imaging. The data and images produced are analyzed by a spatial analysis program. The experiments provide not only hydraulic head distribution but also capture solute front images and mass exchange measurements between the conduit and matrix domains. In the experiment, we measure and record pressures, and quantify flow rates and solute transport. The results present a plausible argument that laboratory analogs can characterize groundwater water flow, solute transport, and mass exchange between the conduit and matrix domains in a karst aquifer. The analog validates the predictions of a numerical model and demonstrates the need of laboratory analogs to provide verification of proposed theories and the calibration of mathematical models.
Image processing and machine learning in the morphological analysis of blood cells.
Rodellar, J; Alférez, S; Acevedo, A; Molina, A; Merino, A
2018-05-01
This review focuses on how image processing and machine learning can be useful for the morphological characterization and automatic recognition of cell images captured from peripheral blood smears. The basics of the 3 core elements (segmentation, quantitative features, and classification) are outlined, and recent literature is discussed. Although red blood cells are a significant part of this context, this study focuses on malignant lymphoid cells and blast cells. There is no doubt that these technologies may help the cytologist to perform efficient, objective, and fast morphological analysis of blood cells. They may also help in the interpretation of some morphological features and may serve as learning and survey tools. Although research is still needed, it is important to define screening strategies to exploit the potential of image-based automatic recognition systems integrated in the daily routine of laboratories along with other analysis methodologies. © 2018 John Wiley & Sons Ltd.
NASA Astrophysics Data System (ADS)
Oswald, Helmut; Mueller-Jones, Kay; Builtjes, Jan; Fleck, Eckart
1998-07-01
The developments in information technologies -- computer hardware, networking and storage media -- has led to expectations that these advances make it possible to replace 35 mm film completely by digital techniques in the catheter laboratory. Besides the role of an archival medium, cine film is used as the major image review and exchange medium in cardiology. None of the today technologies can fulfill completely the requirements to replace cine film. One of the major drawbacks of cine film is the single access in time and location. For the four catheter laboratories in our institutions we have designed a complementary concept combining the CD-R, also called CD-medical, as a single patient storage and exchange medium, and a digital archive for on-line access and image review of selected frames or short sequences on adequate medical workstations. The image data from various modalities as well as all digital documents regarding to a patient are part of an electronic patient record. The access, the processing and the display of documents is supported by an integrated medical application.
High pressure single-crystal micro X-ray diffraction analysis with GSE_ADA/RSV software
NASA Astrophysics Data System (ADS)
Dera, Przemyslaw; Zhuravlev, Kirill; Prakapenka, Vitali; Rivers, Mark L.; Finkelstein, Gregory J.; Grubor-Urosevic, Ognjen; Tschauner, Oliver; Clark, Simon M.; Downs, Robert T.
2013-08-01
GSE_ADA/RSV is a free software package for custom analysis of single-crystal micro X-ray diffraction (SCμXRD) data, developed with particular emphasis on data from samples enclosed in diamond anvil cells and subject to high pressure conditions. The package has been in extensive use at the high pressure beamlines of Advanced Photon Source (APS), Argonne National Laboratory and Advanced Light Source (ALS), Lawrence Berkeley National Laboratory. The software is optimized for processing of wide-rotation images and includes a variety of peak intensity corrections and peak filtering features, which are custom-designed to make processing of high pressure SCμXRD easier and more reliable.
Dalton, J.B.; Bove, D.J.; Mladinich, C.S.
2005-01-01
Visible-wavelength and near-infrared image cubes of the Animas River watershed in southwestern Colorado have been acquired by the Jet Propulsion Laboratory's Airborne Visible and InfraRed Imaging Spectrometer (AVIRIS) instrument and processed using the U.S. Geological Survey Tetracorder v3.6a2 implementation. The Tetracorder expert system utilizes a spectral reference library containing more than 400 laboratory and field spectra of end-member minerals, mineral mixtures, vegetation, manmade materials, atmospheric gases, and additional substances to generate maps of mineralogy, vegetation, snow, and other material distributions. Major iron-bearing, clay, mica, carbonate, sulfate, and other minerals were identified, among which are several minerals associated with acid rock drainage, including pyrite, jarosite, alunite, and goethite. Distributions of minerals such as calcite and chlorite indicate a relationship between acid-neutralizing assemblages and stream geochemistry within the watershed. Images denoting material distributions throughout the watershed have been orthorectified against digital terrain models to produce georeferenced image files suitable for inclusion in Geographic Information System databases. Results of this study are of use to land managers, stakeholders, and researchers interested in understanding a number of characteristics of the Animas River watershed.
NASA Astrophysics Data System (ADS)
Sou, In Mei; Calantoni, Joseph; Reed, Allen; Furukawa, Yoko
2012-11-01
A synchronized dual stereo particle image velocimetry (PIV) measurement technique is used to examine the erosion process of a cohesive sediment core in the Small Oscillatory Flow Tunnel (S-OFT) in the Sediment Dynamics Laboratory at the Naval Research Laboratory, Stennis Space Center, MS. The dual stereo PIV windows were positioned on either side of a sediment core inserted along the centerline of the S-OFT allowing for a total measurement window of about 20 cm long by 10 cm high with sub-millimeter spacing on resolved velocity vectors. The period of oscillation ranged from 2.86 to 6.12 seconds with constant semi-excursion amplitude in the test section of 9 cm. During the erosion process, Kelvin-Helmholtz instabilities were observed as the flow accelerated in each direction and eventually were broken down when the flow reversed. The relative concentration of suspended sediments under different flow conditions was estimated using the intensity of light scattered from the sediment particles in suspension. By subtracting the initial light scattered from the core, the residual light intensity was assumed to be scattered from suspended sediments eroded from the core. Results from two different sediment core samples of mud and sand mixtures will be presented.
Texture Analysis and Cartographic Feature Extraction.
1985-01-01
Investigations into using various image descriptors as well as developing interactive feature extraction software on the Digital Image Analysis Laboratory...system. Originator-supplied keywords: Ad-Hoc image descriptor; Bayes classifier; Bhattachryya distance; Clustering; Digital Image Analysis Laboratory
Multispectral image enhancement processing for microsat-borne imager
NASA Astrophysics Data System (ADS)
Sun, Jianying; Tan, Zheng; Lv, Qunbo; Pei, Linlin
2017-10-01
With the rapid development of remote sensing imaging technology, the micro satellite, one kind of tiny spacecraft, appears during the past few years. A good many studies contribute to dwarfing satellites for imaging purpose. Generally speaking, micro satellites weigh less than 100 kilograms, even less than 50 kilograms, which are slightly larger or smaller than the common miniature refrigerators. However, the optical system design is hard to be perfect due to the satellite room and weight limitation. In most cases, the unprocessed data captured by the imager on the microsatellite cannot meet the application need. Spatial resolution is the key problem. As for remote sensing applications, the higher spatial resolution of images we gain, the wider fields we can apply them. Consequently, how to utilize super resolution (SR) and image fusion to enhance the quality of imagery deserves studying. Our team, the Key Laboratory of Computational Optical Imaging Technology, Academy Opto-Electronics, is devoted to designing high-performance microsat-borne imagers and high-efficiency image processing algorithms. This paper addresses a multispectral image enhancement framework for space-borne imagery, jointing the pan-sharpening and super resolution techniques to deal with the spatial resolution shortcoming of microsatellites. We test the remote sensing images acquired by CX6-02 satellite and give the SR performance. The experiments illustrate the proposed approach provides high-quality images.
Tracker: Image-Processing and Object-Tracking System Developed
NASA Technical Reports Server (NTRS)
Klimek, Robert B.; Wright, Theodore W.
1999-01-01
Tracker is an object-tracking and image-processing program designed and developed at the NASA Lewis Research Center to help with the analysis of images generated by microgravity combustion and fluid physics experiments. Experiments are often recorded on film or videotape for analysis later. Tracker automates the process of examining each frame of the recorded experiment, performing image-processing operations to bring out the desired detail, and recording the positions of the objects of interest. It can load sequences of images from disk files or acquire images (via a frame grabber) from film transports, videotape, laser disks, or a live camera. Tracker controls the image source to automatically advance to the next frame. It can employ a large array of image-processing operations to enhance the detail of the acquired images and can analyze an arbitrarily large number of objects simultaneously. Several different tracking algorithms are available, including conventional threshold and correlation-based techniques, and more esoteric procedures such as "snake" tracking and automated recognition of character data in the image. The Tracker software was written to be operated by researchers, thus every attempt was made to make the software as user friendly and self-explanatory as possible. Tracker is used by most of the microgravity combustion and fluid physics experiments performed by Lewis, and by visiting researchers. This includes experiments performed on the space shuttles, Mir, sounding rockets, zero-g research airplanes, drop towers, and ground-based laboratories. This software automates the analysis of the flame or liquid s physical parameters such as position, velocity, acceleration, size, shape, intensity characteristics, color, and centroid, as well as a number of other measurements. It can perform these operations on multiple objects simultaneously. Another key feature of Tracker is that it performs optical character recognition (OCR). This feature is useful in extracting numerical instrumentation data that are embedded in images. All the results are saved in files for further data reduction and graphing. There are currently three Tracking Systems (workstations) operating near the laboratories and offices of Lewis Microgravity Science Division researchers. These systems are used independently by students, scientists, and university-based principal investigators. The researchers bring their tapes or films to the workstation and perform the tracking analysis. The resultant data files generated by the tracking process can then be analyzed on the spot, although most of the time researchers prefer to transfer them via the network to their offices for further analysis or plotting. In addition, many researchers have installed Tracker on computers in their office for desktop analysis of digital image sequences, which can be digitized by the Tracking System or some other means. Tracker has not only provided a capability to efficiently and automatically analyze large volumes of data, saving many hours of tedious work, but has also provided new capabilities to extract valuable information and phenomena that was heretofore undetected and unexploited.
Applied 3D printing for microscopy in health science research
NASA Astrophysics Data System (ADS)
Brideau, Craig; Zareinia, Kourosh; Stys, Peter
2015-03-01
The rapid prototyping capability offered by 3D printing is considered advantageous for commercial applications. However, the ability to quickly produce precision custom devices is highly beneficial in the research laboratory setting as well. Biological laboratories require the manipulation and analysis of delicate living samples, thus the ability to create custom holders, support equipment, and adapters allow the extension of existing laboratory machines. Applications include camera adapters and stage sample holders for microscopes, surgical guides for tissue preparation, and small precision tools customized to unique specifications. Where high precision is needed, especially the reproduction of fine features, a printer with a high resolution is needed. However, the introduction of cheaper, lower resolution commercial printers have been shown to be more than adequate for less demanding projects. For direct manipulation of delicate samples, biocompatible raw materials are often required, complicating the printing process. This paper will examine some examples of 3D-printed objects for laboratory use, and provide an overview of the requirements for 3D printing for this application. Materials, printing resolution, production, and ease of use will all be reviewed with an eye to producing better printers and techniques for laboratory applications. Specific case studies will highlight applications for 3D-printed devices in live animal imaging for both microscopy and Magnetic Resonance Imaging.
USDA-ARS?s Scientific Manuscript database
Problems with assessing the efficacy of cleaning and sanitation procedures in delicatessen departments is a recognized food safety concern. Our laboratory demonstrated that cleaning procedures in produce processing plants can be enhanced using a portable fluorescence imaging device. To explore the f...
The role of technology in the clinical laboratory of the future.
Wilkinson, D S
1997-01-01
Advances in automation and informatics will drive the implementation of new technology as we enter the 21st century. Five technologies which will have the greatest impact on the practice of laboratory medicine during the next decade include molecular diagnostics, near patient testing, image analysis, robotics, and information management. The list of molecular pathology tests with potential clinical utility expands daily. Some, such as tests for human immune deficiency virus (HIV) and hepatitis C virus, already are available as commercial kits. Quality assessment and proficiency testing programs still are evolving. DNA tests in oncology, such as T- and B-cell gene rearrangements and t(9;22) translocation, have proven useful in detecting small numbers of tumor cells and have demonstrated clinical utility in some circumstances. Tests for monogenetic diseases, such as sickle cell disease, are useful in planning antenatal management of mothers at risk. Screening tests for the genetic predisposition for certain forms of colon and breast cancer and Alzheimer's Disease are now possible. This suggests the potential for large scale screening of populations at risk. Continued improvements in biosensor technology and miniaturization will increase the ability to test for many analytes at or near the patient. The generally increased cost per test must be reconciled with the potential to decrease the overall cost of care by improved turnaround time. Computerized image analysis will radically change, and in some cases eliminate, manual clinical microscopy in urinalysis, hematology, immunohistochemistry, and cytology. Robotics will greatly decrease personnel requirements for repetitive tasks, such as specimen transport, processing, and aliquoting. We will process many specimens from start to finish without human intervention. Image management systems will allow archiving of diagnostic gross and microscopic images along with the traditional text descriptions and diagnosis. Telepathology will link smaller centers with expert consultants in tertiary centers. Voice recognition systems will obviate the need for transcriptionists. Modern database architectures will allow the clinical laboratory to measure performance effectiveness and clinical outcomes and will place laboratorians at the forefront of outcomes research. Hand-held devices will allow physicians to conveniently order laboratory tests and retrieve results, further decreasing the functional turnaround time for laboratory testing. All of these technologies will be expensive to implement, but well-planned deployment will both decrease cost and improve the quality of medical care.
Diazo processing of LANDSAT imagery: A low-cost instructional technique
NASA Technical Reports Server (NTRS)
Lusch, D. P.
1981-01-01
Diazo processing of LANDSAT imagery is a relatively simple and cost effective method of producing enhanced renditions of the visual LANDSAT products. This technique is capable of producing a variety of image enhancements which have value in a teaching laboratory environment. Additionally, with the appropriate equipment, applications research which relys on accurate and repeatable results is possible. Exposure and development equipment options, diazo materials, and enhancement routines are discussed.
Integration of digital gross pathology images for enterprise-wide access.
Amin, Milon; Sharma, Gaurav; Parwani, Anil V; Anderson, Ralph; Kolowitz, Brian J; Piccoli, Anthony; Shrestha, Rasu B; Lauro, Gonzalo Romero; Pantanowitz, Liron
2012-01-01
Sharing digital pathology images for enterprise- wide use into a picture archiving and communication system (PACS) is not yet widely adopted. We share our solution and 3-year experience of transmitting such images to an enterprise image server (EIS). Gross pathology images acquired by prosectors were integrated with clinical cases into the laboratory information system's image management module, and stored in JPEG2000 format on a networked image server. Automated daily searches for cases with gross images were used to compile an ASCII text file that was forwarded to a separate institutional Enterprise Digital Imaging and Communications in Medicine (DICOM) Wrapper (EDW) server. Concurrently, an HL7-based image order for these cases was generated, containing the locations of images and patient data, and forwarded to the EDW, which combined data in these locations to generate images with patient data, as required by DICOM standards. The image and data were then "wrapped" according to DICOM standards, transferred to the PACS servers, and made accessible on an institution-wide basis. In total, 26,966 gross images from 9,733 cases were transmitted over the 3-year period from the laboratory information system to the EIS. The average process time for cases with successful automatic uploads (n=9,688) to the EIS was 98 seconds. Only 45 cases (0.5%) failed requiring manual intervention. Uploaded images were immediately available to institution- wide PACS users. Since inception, user feedback has been positive. Enterprise- wide PACS- based sharing of pathology images is feasible, provides useful services to clinical staff, and utilizes existing information system and telecommunications infrastructure. PACS-shared pathology images, however, require a "DICOM wrapper" for multisystem compatibility.
Integration of digital gross pathology images for enterprise-wide access
Amin, Milon; Sharma, Gaurav; Parwani, Anil V.; Anderson, Ralph; Kolowitz, Brian J; Piccoli, Anthony; Shrestha, Rasu B.; Lauro, Gonzalo Romero; Pantanowitz, Liron
2012-01-01
Background: Sharing digital pathology images for enterprise- wide use into a picture archiving and communication system (PACS) is not yet widely adopted. We share our solution and 3-year experience of transmitting such images to an enterprise image server (EIS). Methods: Gross pathology images acquired by prosectors were integrated with clinical cases into the laboratory information system's image management module, and stored in JPEG2000 format on a networked image server. Automated daily searches for cases with gross images were used to compile an ASCII text file that was forwarded to a separate institutional Enterprise Digital Imaging and Communications in Medicine (DICOM) Wrapper (EDW) server. Concurrently, an HL7-based image order for these cases was generated, containing the locations of images and patient data, and forwarded to the EDW, which combined data in these locations to generate images with patient data, as required by DICOM standards. The image and data were then “wrapped” according to DICOM standards, transferred to the PACS servers, and made accessible on an institution-wide basis. Results: In total, 26,966 gross images from 9,733 cases were transmitted over the 3-year period from the laboratory information system to the EIS. The average process time for cases with successful automatic uploads (n=9,688) to the EIS was 98 seconds. Only 45 cases (0.5%) failed requiring manual intervention. Uploaded images were immediately available to institution- wide PACS users. Since inception, user feedback has been positive. Conclusions: Enterprise- wide PACS- based sharing of pathology images is feasible, provides useful services to clinical staff, and utilizes existing information system and telecommunications infrastructure. PACS-shared pathology images, however, require a “DICOM wrapper” for multisystem compatibility. PMID:22530178
North Twin Peak in super resolution
NASA Technical Reports Server (NTRS)
1997-01-01
This pair of images shows the result of taking a sequence of 25 identical exposures from the Imager for Mars Pathfinder (IMP) of the northern Twin Peak, with small camera motions, and processing them with the Super-Resolution algorithm developed at NASA's Ames Research Center.
The upper image is a representative input image, scaled up by a factor of five, with the pixel edges smoothed out for a fair comparison. The lower image allows significantly finer detail to be resolved.Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is an operating division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.The super-resolution research was conducted by Peter Cheeseman, Bob Kanefsky, Robin Hanson, and John Stutz of NASA's Ames Research Center, Mountain View, CA. More information on this technology is available on the Ames Super Resolution home page athttp://ic-www.arc.nasa.gov/ic/projects/bayes-group/ group/super-res/Advances in biologically inspired on/near sensor processing
NASA Astrophysics Data System (ADS)
McCarley, Paul L.
1999-07-01
As electro-optic sensors increase in size and frame rate, the data transfer and digital processing resource requirements also increase. In many missions, the spatial area of interest is but a small fraction of the available field of view. Choosing the right region of interest, however, is a challenge and still requires an enormous amount of downstream digital processing resources. In order to filter this ever-increasing amount of data, we look at how nature solves the problem. The Advanced Guidance Division of the Munitions Directorate, Air Force Research Laboratory at Elgin AFB, Florida, has been pursuing research in the are of advanced sensor and image processing concepts based on biologically inspired sensory information processing. A summary of two 'neuromorphic' processing efforts will be presented along with a seeker system concept utilizing this innovative technology. The Neuroseek program is developing a 256 X 256 2-color dual band IRFPA coupled to an optimized silicon CMOS read-out and processing integrated circuit that provides simultaneous full-frame imaging in MWIR/LWIR wavebands along with built-in biologically inspired sensor image processing functions. Concepts and requirements for future such efforts will also be discussed.
Facility Name | Research Site Name | NREL
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Reconstruction of coded aperture images
NASA Technical Reports Server (NTRS)
Bielefeld, Michael J.; Yin, Lo I.
1987-01-01
Balanced correlation method and the Maximum Entropy Method (MEM) were implemented to reconstruct a laboratory X-ray source as imaged by a Uniformly Redundant Array (URA) system. Although the MEM method has advantages over the balanced correlation method, it is computationally time consuming because of the iterative nature of its solution. Massively Parallel Processing, with its parallel array structure is ideally suited for such computations. These preliminary results indicate that it is possible to use the MEM method in future coded-aperture experiments with the help of the MPP.
Software for visualization, analysis, and manipulation of laser scan images
NASA Astrophysics Data System (ADS)
Burnsides, Dennis B.
1997-03-01
The recent introduction of laser surface scanning to scientific applications presents a challenge to computer scientists and engineers. Full utilization of this two- dimensional (2-D) and three-dimensional (3-D) data requires advances in techniques and methods for data processing and visualization. This paper explores the development of software to support the visualization, analysis and manipulation of laser scan images. Specific examples presented are from on-going efforts at the Air Force Computerized Anthropometric Research and Design (CARD) Laboratory.
NASA Technical Reports Server (NTRS)
1983-01-01
Under a grant from California Institute of Technology, Jet Propulsion Laboratory (JPL) and LACMA (Los Angeles County Museum of Art) used image enhancement techniques to separate x-ray images of paintings when one had been painted on top of another. The technique is derived from computer processing of spacecraft-acquired imagery, and will allow earlier paintings, some of which have been covered for centuries, to be evaluated. JPL developed the program for "subtracting" the top painting and enhancing the bottom one, and believes an even more advanced system is possible.
Validation of vision-based obstacle detection algorithms for low-altitude helicopter flight
NASA Technical Reports Server (NTRS)
Suorsa, Raymond; Sridhar, Banavar
1991-01-01
A validation facility being used at the NASA Ames Research Center is described which is aimed at testing vision based obstacle detection and range estimation algorithms suitable for low level helicopter flight. The facility is capable of processing hundreds of frames of calibrated multicamera 6 degree-of-freedom motion image sequencies, generating calibrated multicamera laboratory images using convenient window-based software, and viewing range estimation results from different algorithms along with truth data using powerful window-based visualization software.
Sensor-based architecture for medical imaging workflow analysis.
Silva, Luís A Bastião; Campos, Samuel; Costa, Carlos; Oliveira, José Luis
2014-08-01
The growing use of computer systems in medical institutions has been generating a tremendous quantity of data. While these data have a critical role in assisting physicians in the clinical practice, the information that can be extracted goes far beyond this utilization. This article proposes a platform capable of assembling multiple data sources within a medical imaging laboratory, through a network of intelligent sensors. The proposed integration framework follows a SOA hybrid architecture based on an information sensor network, capable of collecting information from several sources in medical imaging laboratories. Currently, the system supports three types of sensors: DICOM repository meta-data, network workflows and examination reports. Each sensor is responsible for converting unstructured information from data sources into a common format that will then be semantically indexed in the framework engine. The platform was deployed in the Cardiology department of a central hospital, allowing identification of processes' characteristics and users' behaviours that were unknown before the utilization of this solution.
Video networking of cardiac catheterization laboratories.
Tobis, J; Aharonian, V; Mansukhani, P; Kasaoka, S; Jhandyala, R; Son, R; Browning, R; Youngblood, L; Thompson, M
1999-02-01
The purpose of this study was to assess the feasibility and accuracy of a video telecommunication network to transmit coronary images to provide on-line interaction between personnel in a cardiac catheterization laboratory and a remote core laboratory. A telecommunication system was installed in the cardiac catheterization laboratory at Kaiser Hospital, Los Angeles, and the core laboratory at the University of California, Irvine, approximately 40 miles away. Cineangiograms, live fluoroscopy, intravascular ultrasound studies and images of the catheterization laboratory were transmitted in real time over a dedicated T1 line at 768 kilobytes/second at 15 frames/second. These cases were performed during a clinical study of angiographic guidance versus intravascular ultrasound (IVUS) guidance of stent deployment. During the cases the core laboratory performed quantitative analysis of the angiograms and ultrasound images. Selected images were then annotated and transmitted back to the catheterization laboratory to facilitate discussion during the procedure. A successful communication hookup was obtained in 39 (98%) of 40 cases. Measurements of angiographic parameters were very close between the original cinefilm and the transmitted images. Quantitative analysis of the ultrasound images showed no significant difference in any of the diameter or cross-sectional area measurements between the original ultrasound tape and the transmitted images. The telecommunication link during the interventional procedures had a significant impact in 23 (58%) of 40 cases affecting the area to be treated, the size of the inflation balloon, recognition of stent underdeployment, or the existence of disease in other areas that was not noted on the original studies. Current video telecommunication systems provide high-quality images on-line with accurate representation of cineangiograms and intravascular ultrasound images. This system had a significant impact on 58% of the cases in this small clinical trial. Telecommunication networks between hospitals and a central core laboratory may facilitate physician training and improve technical skills and judgement during interventional procedures. This project has implications for how multicenter clinical trials could be operated through telecommunication networks to ensure conformity with the protocol.
NASA Astrophysics Data System (ADS)
Calta, Nicholas P.; Wang, Jenny; Kiss, Andrew M.; Martin, Aiden A.; Depond, Philip J.; Guss, Gabriel M.; Thampy, Vivek; Fong, Anthony Y.; Weker, Johanna Nelson; Stone, Kevin H.; Tassone, Christopher J.; Kramer, Matthew J.; Toney, Michael F.; Van Buuren, Anthony; Matthews, Manyalibo J.
2018-05-01
In situ X-ray-based measurements of the laser powder bed fusion (LPBF) additive manufacturing process produce unique data for model validation and improved process understanding. Synchrotron X-ray imaging and diffraction provide high resolution, bulk sensitive information with sufficient sampling rates to probe melt pool dynamics as well as phase and microstructure evolution. Here, we describe a laboratory-scale LPBF test bed designed to accommodate diffraction and imaging experiments at a synchrotron X-ray source during LPBF operation. We also present experimental results using Ti-6Al-4V, a widely used aerospace alloy, as a model system. Both imaging and diffraction experiments were carried out at the Stanford Synchrotron Radiation Lightsource. Melt pool dynamics were imaged at frame rates up to 4 kHz with a ˜1.1 μm effective pixel size and revealed the formation of keyhole pores along the melt track due to vapor recoil forces. Diffraction experiments at sampling rates of 1 kHz captured phase evolution and lattice contraction during the rapid cooling present in LPBF within a ˜50 × 100 μm area. We also discuss the utility of these measurements for model validation and process improvement.
HALO: a reconfigurable image enhancement and multisensor fusion system
NASA Astrophysics Data System (ADS)
Wu, F.; Hickman, D. L.; Parker, Steve J.
2014-06-01
Contemporary high definition (HD) cameras and affordable infrared (IR) imagers are set to dramatically improve the effectiveness of security, surveillance and military vision systems. However, the quality of imagery is often compromised by camera shake, or poor scene visibility due to inadequate illumination or bad atmospheric conditions. A versatile vision processing system called HALO™ is presented that can address these issues, by providing flexible image processing functionality on a low size, weight and power (SWaP) platform. Example processing functions include video distortion correction, stabilisation, multi-sensor fusion and image contrast enhancement (ICE). The system is based around an all-programmable system-on-a-chip (SoC), which combines the computational power of a field-programmable gate array (FPGA) with the flexibility of a CPU. The FPGA accelerates computationally intensive real-time processes, whereas the CPU provides management and decision making functions that can automatically reconfigure the platform based on user input and scene content. These capabilities enable a HALO™ equipped reconnaissance or surveillance system to operate in poor visibility, providing potentially critical operational advantages in visually complex and challenging usage scenarios. The choice of an FPGA based SoC is discussed, and the HALO™ architecture and its implementation are described. The capabilities of image distortion correction, stabilisation, fusion and ICE are illustrated using laboratory and trials data.
Calta, Nicholas P; Wang, Jenny; Kiss, Andrew M; Martin, Aiden A; Depond, Philip J; Guss, Gabriel M; Thampy, Vivek; Fong, Anthony Y; Weker, Johanna Nelson; Stone, Kevin H; Tassone, Christopher J; Kramer, Matthew J; Toney, Michael F; Van Buuren, Anthony; Matthews, Manyalibo J
2018-05-01
In situ X-ray-based measurements of the laser powder bed fusion (LPBF) additive manufacturing process produce unique data for model validation and improved process understanding. Synchrotron X-ray imaging and diffraction provide high resolution, bulk sensitive information with sufficient sampling rates to probe melt pool dynamics as well as phase and microstructure evolution. Here, we describe a laboratory-scale LPBF test bed designed to accommodate diffraction and imaging experiments at a synchrotron X-ray source during LPBF operation. We also present experimental results using Ti-6Al-4V, a widely used aerospace alloy, as a model system. Both imaging and diffraction experiments were carried out at the Stanford Synchrotron Radiation Lightsource. Melt pool dynamics were imaged at frame rates up to 4 kHz with a ∼1.1 μm effective pixel size and revealed the formation of keyhole pores along the melt track due to vapor recoil forces. Diffraction experiments at sampling rates of 1 kHz captured phase evolution and lattice contraction during the rapid cooling present in LPBF within a ∼50 × 100 μm area. We also discuss the utility of these measurements for model validation and process improvement.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Calta, Nicholas P.; Wang, Jenny; Kiss, Andrew M.
In situ X-ray-based measurements of the laser powder bed fusion (LPBF) additive manufacturing process produce unique data for model validation and improved process understanding. Synchrotron X-ray imaging and diffraction provide high resolution, bulk sensitive information with sufficient sampling rates to probe melt pool dynamics as well as phase and microstructure evolution. Here, we describe a laboratory-scale LPBF test bed designed to accommodate diffraction and imaging experiments at a synchrotron X-ray source during LPBF operation. We also present experimental results using Ti-6Al-4V, a widely used aerospace alloy, as a model system. Both imaging and diffraction experiments were carried out at themore » Stanford Synchrotron Radiation Lightsource. Melt pool dynamics were imaged at frame rates up to 4 kHz with a ~1.1 μm effective pixel size and revealed the formation of keyhole pores along the melt track due to vapor recoil forces. Diffraction experiments at sampling rates of 1 kHz captured phase evolution and lattice contraction during the rapid cooling present in LPBF within a ~50 × 100 μm area. In conclusion, we also discuss the utility of these measurements for model validation and process improvement.« less
Calta, Nicholas P.; Wang, Jenny; Kiss, Andrew M.; ...
2018-05-01
In situ X-ray-based measurements of the laser powder bed fusion (LPBF) additive manufacturing process produce unique data for model validation and improved process understanding. Synchrotron X-ray imaging and diffraction provide high resolution, bulk sensitive information with sufficient sampling rates to probe melt pool dynamics as well as phase and microstructure evolution. Here, we describe a laboratory-scale LPBF test bed designed to accommodate diffraction and imaging experiments at a synchrotron X-ray source during LPBF operation. We also present experimental results using Ti-6Al-4V, a widely used aerospace alloy, as a model system. Both imaging and diffraction experiments were carried out at themore » Stanford Synchrotron Radiation Lightsource. Melt pool dynamics were imaged at frame rates up to 4 kHz with a ~1.1 μm effective pixel size and revealed the formation of keyhole pores along the melt track due to vapor recoil forces. Diffraction experiments at sampling rates of 1 kHz captured phase evolution and lattice contraction during the rapid cooling present in LPBF within a ~50 × 100 μm area. In conclusion, we also discuss the utility of these measurements for model validation and process improvement.« less
NASA Astrophysics Data System (ADS)
Jost, Bernhard; Pommerol, Antoine; Poch, Olivier; Carrasco, Nathalie; Szopa, Cyril; Thomas, Nicolas
2015-11-01
The OSIRIS imaging system [1] onboard European Space Agency’s Rosetta mission has been orbiting the comet 67P/Churyumov-Gerasimenko (67P) since August 2014. It provides an enormous quantity of high resolution images of the nucleus in the visible spectral range. 67P revealed an unexpected diversity of complex surface structures and spectral properties have also been measured [2].To better interpret this data, a profound knowledge of laboratory analogs of cometary surfaces is essential. For this reason we have set up the LOSSy laboratory (Laboratory for Outflow Studies of Sublimating Materials) to study the spectrophotometric properties of ice-bearing cometary nucleus analogs. The main focus lies on the characterization of the surface evolution under simulated space conditions. The laboratory is equipped with two facilities: the PHIRE-2 radio-goniometer [3], designed to measure the bidirectional visible reflectance of samples under a wide range of geometries and the SCITEAS simulation chamber [4], designed to study the evolution of icy samples subliming under low pressure/temperature conditions by hyperspectral imaging in the VIS-NIR range. Different microscopes complement the two facilities.We present laboratory data of different types of fine grained ice particles mixed with non-volatile components (complex organic matter and minerals). As the ice sublimes, a deposition lag of non-volatile constituents is built-up on top of the ice, possibly mimic a cometary surface. The bidirectional reflectance of the samples have been characterized before and after the sublimation process.A comparison of our laboratory findings with recent OSIRIS data [5] will be presented.[1] Keller, H. U., et al., 2007, Space Sci. Rev., 128, 26[2] Thomas, N. , 2015, Science, 347, Issue 6220, aaa0440[3] Jost, B., submitted, Icarus[4] Pommerol, A., et al., 2015. Planet Space Sci 109:106-122.[5] Fornasier, S., et al., in press. Icarus, arXiv:1505.06888
NASA Astrophysics Data System (ADS)
Diemoz, P. C.; Endrizzi, M.; Vittoria, F. A.; Hagen, C. K.; Kallon, G.; Basta, D.; Marenzana, M.; Delogu, P.; Vincenzi, A.; De Ruvo, L.; Spandre, G.; Brez, A.; Bellazzini, R.; Olivo, A.
2015-03-01
Edge illumination (EI) X-ray phase-contrast imaging (XPCI) has potential for applications in different fields of research, including materials science, non-destructive industrial testing, small-animal imaging, and medical imaging. One of its main advantages is the compatibility with laboratory equipment, in particular with conventional non-microfocal sources, which makes its exploitation in normal research laboratories possible. In this work, we demonstrate that the signal in laboratory implementations of EI can be correctly described with the use of the simplified geometrical optics. Besides enabling the derivation of simple expressions for the sensitivity and spatial resolution of a given EI setup, this model also highlights the EI's achromaticity. With the aim of improving image quality, as well as to take advantage of the fact that all energies in the spectrum contribute to the image contrast, we carried out EI acquisitions using a photon-counting energy-resolved detector. The obtained results demonstrate that this approach has great potential for future laboratory implementations of EI.
Internet-based transfer of cardiac ultrasound images
NASA Technical Reports Server (NTRS)
Firstenberg, M. S.; Greenberg, N. L.; Garcia, M. J.; Morehead, A. J.; Cardon, L. A.; Klein, A. L.; Thomas, J. D.
2000-01-01
A drawback to large-scale multicentre studies is the time required for the centralized evaluation of diagnostic images. We evaluated the feasibility of digital transfer of echocardiographic images to a central laboratory for rapid and accurate interpretation. Ten patients undergoing trans-oesophageal echocardiographic scanning at three sites had representative single images and multiframe loops stored digitally. The images were analysed in the ordinary way. All images were then transferred via the Internet to a central laboratory and reanalysed by a different observer. The file sizes were 1.5-72 MByte and the transfer rates achieved were 0.6-4.8 Mbit/min. Quantitative measurements were similar between most on-site and central laboratory measurements (all P > 0.25), although measurements differed for left atrial width and pulmonary venous systolic velocities (both P < 0.05). Digital transfer of echocardiographic images and data to a central laboratory may be useful for multicentre trials.
MIRIADS: miniature infrared imaging applications development system description and operation
NASA Astrophysics Data System (ADS)
Baxter, Christopher R.; Massie, Mark A.; McCarley, Paul L.; Couture, Michael E.
2001-10-01
A cooperative effort between the U.S. Air Force Research Laboratory, Nova Research, Inc., the Raytheon Infrared Operations (RIO) and Optics 1, Inc. has successfully produced a miniature infrared camera system that offers significant real-time signal and image processing capabilities by virtue of its modular design. This paper will present an operational overview of the system as well as results from initial testing of the 'Modular Infrared Imaging Applications Development System' (MIRIADS) configured as a missile early-warning detection system. The MIRIADS device can operate virtually any infrared focal plane array (FPA) that currently exists. Programmable on-board logic applies user-defined processing functions to the real-time digital image data for a variety of functions. Daughterboards may be plugged onto the system to expand the digital and analog processing capabilities of the system. A unique full hemispherical infrared fisheye optical system designed and produced by Optics 1, Inc. is utilized by the MIRIADS in a missile warning application to demonstrate the flexibility of the overall system to be applied to a variety of current and future AFRL missions.
Mars Science Laboratory Mission Curiosity Rover Stereo
2011-07-22
This stereo image of NASA Mars Science Laboratory Curiosity Rovert was taken May 26, 2011, in Spacecraft Assembly Facility at NASA Jet Propulsion Laboratory in Pasadena, Calif. 3D glasses are necessary to view this image.
On the use of a laser ablation as a laboratory seismic source
NASA Astrophysics Data System (ADS)
Shen, Chengyi; Brito, Daniel; Diaz, Julien; Zhang, Deyuan; Poydenot, Valier; Bordes, Clarisse; Garambois, Stéphane
2017-04-01
Mimic near-surface seismic imaging conducted in well-controlled laboratory conditions is potentially a powerful tool to study large scale wave propagations in geological media by means of upscaling. Laboratory measurements are indeed particularly suited for tests of theoretical modellings and comparisons with numerical approaches. We have developed an automated Laser Doppler Vibrometer (LDV) platform, which is able to detect and register broadband nano-scale displacements on the surface of various materials. This laboratory equipment has already been validated in experiments where piezoelectric transducers were used as seismic sources. We are currently exploring a new seismic source in our experiments, a laser ablation, in order to compensate some drawbacks encountered with piezoelectric sources. The laser ablation source is considered to be an interesting ultrasound wave generator since the 1960s. It was believed to have numerous potential applications such as the Non-Destructive Testing (NDT) and the measurements of velocities and attenuations in solid samples. We aim at adapting and developing this technique into geophysical experimental investigations in order to produce and explore complete micro-seismic data sets in the laboratory. We will first present the laser characteristics including its mechanism, stability, reproducibility, and will evaluate in particular the directivity patterns of such a seismic source. We have started by applying the laser ablation source on the surfaces of multi-scale homogeneous aluminum samples and are now testing it on heterogeneous and fractured limestone cores. Some other results of data processing will also be shown, especially the 2D-slice V P and V S tomographic images obtained in limestone samples. Apart from the experimental records, numerical simulations will be carried out for both the laser source modelling and the wave propagation in different media. First attempts will be done to compare quantitatively the experimental data with simulations. Meanwhile, CT-scan X-ray images of these limestone cores will be used to check the relative pertinences of velocity tomography images produced by this newly developed laser ablation seismic source.
NASA Astrophysics Data System (ADS)
Daudin, Gabrielle; Oburger, Eva; Schmidt, Hannes; Borisov, Sergey; Pradier, Céline; Jourdan, Christophe; Marsden, Claire; Obermaier, Daniela; Woebken, Dagmar; Richter, Andreas; Wenzel, Walter; Hinsinger, Philippe
2017-04-01
Roots do not only take up water and nutrients from surrounding soil but they also release a wide range of exudates, such as low molecular weight organic compounds, CO2 or protons. Root-soil interactions trigger heterogeneous rhizosphere processes based on differences in root activity along the root axis and with distance from the root surface. Elucidating their temporal and spatial dynamics is of crucial importance for a better understanding of these interrelated biogeochemical processes in the rhizosphere. Therefore, monitoring key parameters at a fine scale and in a non-invasive way at the root-soil interface is essential. Planar optodes are an emerging technology that allows in situ and non-destructive imaging of mainly pH, CO2 and O2. Originated in limnology, planar optodes have recently been applied to soil-root systems in laboratory conditions. This presentation will highlight advantages and challenges of using planar optodes to image pH and O2 dynamics in the rhizosphere, focusing on two RGB (red-green-blue) approaches: a commercially available system (PreSens) and a custom-made one. Important insights into robustness, accuracy, potentials and limitations of the two systems applied to different laboratory/greenhouse-based experimental conditions (flooded and aerobic rhizobox systems, plant species) will be addressed. Furthermore, challenges of optode measurements in the field, including a first case study with Eucalyptus grandis in Brazil, will be discussed.
Irdis: A Digital Scene Storage And Processing System For Hardware-In-The-Loop Missile Testing
NASA Astrophysics Data System (ADS)
Sedlar, Michael F.; Griffith, Jerry A.
1988-07-01
This paper describes the implementation of a Seeker Evaluation and Test Simulation (SETS) Facility at Eglin Air Force Base. This facility will be used to evaluate imaging infrared (IIR) guided weapon systems by performing various types of laboratory tests. One such test is termed Hardware-in-the-Loop (HIL) simulation (Figure 1) in which the actual flight of a weapon system is simulated as closely as possible in the laboratory. As shown in the figure, there are four major elements in the HIL test environment; the weapon/sensor combination, an aerodynamic simulator, an imagery controller, and an infrared imagery system. The paper concentrates on the approaches and methodologies used in the imagery controller and infrared imaging system elements for generating scene information. For procurement purposes, these two elements have been combined into an Infrared Digital Injection System (IRDIS) which provides scene storage, processing, and output interface to drive a radiometric display device or to directly inject digital video into the weapon system (bypassing the sensor). The paper describes in detail how standard and custom image processing functions have been combined with off-the-shelf mass storage and computing devices to produce a system which provides high sample rates (greater than 90 Hz), a large terrain database, high weapon rates of change, and multiple independent targets. A photo based approach has been used to maximize terrain and target fidelity, thus providing a rich and complex scene for weapon/tracker evaluation.
Machine vision inspection of lace using a neural network
NASA Astrophysics Data System (ADS)
Sanby, Christopher; Norton-Wayne, Leonard
1995-03-01
Lace is particularly difficult to inspect using machine vision since it comprises a fine and complex pattern of threads which must be verified, on line and in real time. Small distortions in the pattern are unavoidable. This paper describes instrumentation for inspecting lace actually on the knitting machine. A CCD linescan camera synchronized to machine motions grabs an image of the lace. Differences between this lace image and a perfect prototype image are detected by comparison methods, thresholding techniques, and finally, a neural network (to distinguish real defects from false alarms). Though produced originally in a laboratory on SUN Sparc work-stations, the processing has subsequently been implemented on a 50 Mhz 486 PC-look-alike. Successful operation has been demonstrated in a factory, but over a restricted width. Full width coverage awaits provision of faster processing.
Leong, Anthony S Y; Leong, F Joel W M
2005-02-01
The imposition of laboratory cost containment, often from external forces, dictates the necessity to develop strategies to meet laboratory cost savings. In addition, the national and worldwide shortage of anatomical pathologists makes it imperative to examine our current practice and laboratory set-ups. Some of the strategies employed in other areas of pathology and laboratory medicine include improvements in staff productivity and the adoption of technological developments that reduce manual intervention. However, such opportunities in anatomical pathology are few and far between. Centralisation has been an effective approach in bringing economies of scale, the adoption of 'best practices' and the consolidation of pathologists, but this has not been possible in anatomical pathology because conventional histoprocessing takes a minimum of 14 hours and clinical turnaround time requirements necessitate that the laboratory and pathologist be in proximity and on site. While centralisation of laboratories for clinical chemistry, haematology and even microbiology has been successful in Australia and other countries, the essential requirements for anatomical pathology laboratories are different. In addition to efficient synchronised courier networks, a method of ultra-rapid tissue processing and some expedient system of returning the prepared tissue sections to the remote laboratory are essential to maintain the turnaround times mandatory for optimal clinical management. The advent of microwave-stimulated tissue processing that can be completed in 30-60 minutes and the immediate availability of compressed digital images of entire tissue sections via telepathology completes the final components of the equation necessary for making centralised anatomical pathology laboratories a reality.
Laboratory Observations of Sand Ripple Evolution in a Small Oscillatory Flow Tunnel
NASA Astrophysics Data System (ADS)
Calantoni, J.; Palmsten, M. L.; Chu, J.; Landry, B. J.; Penko, A.
2014-12-01
The dynamics of sand ripples are vital to understanding numerous coastal processes such as sediment transport, wave attenuation, boundary layer development, and seafloor acoustic properties. Experimental work was conducted in a small oscillatory flow tunnel at the Sediment Dynamics Laboratory at the Naval Research Laboratory, Stennis Space Center. Six different monochromatic oscillatory forcings, three with velocity asymmetry and three without, were used to investigate sand ripple dynamics using a unimodal grain size distribution with D50=0.65 mm. The experiments represent an extension of previous work using bimodal grain size distributions. A DSLR camera with a 180-degree fisheye lens collected images of the sediment bed profile every 2 seconds to resolve changes in ripple geometries and migration rates resulting from the different flow conditions for over 127 hours (229,388 images). Matlab © algorithms undistorted the fisheye images and quantified the ripple geometries, wavelengths, heights, and migration rates as a function of flow forcing. The mobility number was kept nearly constant by increasing and decreasing the semi-excursion amplitude and the wave frequency, respectively. We observed distinct changes in ripple geometry and migration rate for the pair of oscillatory forcings having nearly identical mobility numbers. The results suggested that the commonly used mobility number might not be appropriate to characterize ripple geometry or migration rates.
NASA Astrophysics Data System (ADS)
Syahputra, M. F.; Chairani, R.; Seniman; Rahmat, R. F.; Abdullah, D.; Napitupulu, D.; Setiawan, M. I.; Albra, W.; Erliana, C. I.; Andayani, U.
2018-03-01
Sperm morphology is still a standard laboratory analysis in diagnosing infertility in men. Manually identification of sperm form is still not accurate, the difficulty in seeing the form of the invisible sperm from the digital microscope image is often a weakness in the process of identification and takes a long time. Therefore, male fertility identification application system is needed Through sperm abnormalities based on sperm morphology (teratospermia). The method used is invariant moment method. This study uses 15 data testing and 20 data training sperm image. That the process of male fertility identification through sperm abnormalities based on sperm morphology (teratospermia) has an accuracy rate of 80.77%. Use of time to process Identification of male fertility through sperm abnormalities Based on sperm morphology (teratospermia) during 0.4369 seconds.
Prototype-Distortion Category Learning: A Two-Phase Learning Process across a Distributed Network
ERIC Educational Resources Information Center
Little, Deborah M.; Thulborn, Keith R.
2006-01-01
This paper reviews a body of work conducted in our laboratory that applies functional magnetic resonance imaging (fMRI) to better understand the biological response and change that occurs during prototype-distortion learning. We review results from two experiments (Little, Klein, Shobat, McClure, & Thulborn, 2004; Little & Thulborn, 2005) that…
SAVA 3: A testbed for integration and control of visual processes
NASA Technical Reports Server (NTRS)
Crowley, James L.; Christensen, Henrik
1994-01-01
The development of an experimental test-bed to investigate the integration and control of perception in a continuously operating vision system is described. The test-bed integrates a 12 axis robotic stereo camera head mounted on a mobile robot, dedicated computer boards for real-time image acquisition and processing, and a distributed system for image description. The architecture was designed to: (1) be continuously operating, (2) integrate software contributions from geographically dispersed laboratories, (3) integrate description of the environment with 2D measurements, 3D models, and recognition of objects, (4) capable of supporting diverse experiments in gaze control, visual servoing, navigation, and object surveillance, and (5) dynamically reconfiguarable.
ERIC Educational Resources Information Center
Vhurumuku, Elaosi; Holtman, Lorna; Mikalsen, Oyvind; Kolsto, Stein D.
2006-01-01
This study investigates the proximal and distal images of the nature of science (NOS) that A-level students develop from their participation in chemistry laboratory work. We also explored the nature of the interactions among the students' proximal and distal images of the NOS and students' participation in laboratory work. Students' views of the…
Feeding People's Curiosity: Leveraging the Cloud for Automatic Dissemination of Mars Images
NASA Technical Reports Server (NTRS)
Knight, David; Powell, Mark
2013-01-01
Smartphones and tablets have made wireless computing ubiquitous, and users expect instant, on-demand access to information. The Mars Science Laboratory (MSL) operations software suite, MSL InterfaCE (MSLICE), employs a different back-end image processing architecture compared to that of the Mars Exploration Rovers (MER) in order to better satisfy modern consumer-driven usage patterns and to offer greater server-side flexibility. Cloud services are a centerpiece of the server-side architecture that allows new image data to be delivered automatically to both scientists using MSLICE and the general public through the MSL website (http://mars.jpl.nasa.gov/msl/).
The Wide-Field Imaging Interferometry Testbed (WIIT): Recent Progress and Results
NASA Technical Reports Server (NTRS)
Rinehart, Stephen A.; Frey, Bradley J.; Leisawitz, David T.; Lyon, Richard G.; Maher, Stephen F.; Martino, Anthony J.
2008-01-01
Continued research with the Wide-Field Imaging Interferometry Testbed (WIIT) has achieved several important milestones. We have moved WIIT into the Advanced Interferometry and Metrology (AIM) Laboratory at Goddard, and have characterized the testbed in this well-controlled environment. The system is now completely automated and we are in the process of acquiring large data sets for analysis. In this paper, we discuss these new developments and outline our future research directions. The WIIT testbed, combined with new data analysis techniques and algorithms, provides a demonstration of the technique of wide-field interferometric imaging, a powerful tool for future space-borne interferometers.
Magnetic resonance imaging in laboratory petrophysical core analysis
NASA Astrophysics Data System (ADS)
Mitchell, J.; Chandrasekera, T. C.; Holland, D. J.; Gladden, L. F.; Fordham, E. J.
2013-05-01
Magnetic resonance imaging (MRI) is a well-known technique in medical diagnosis and materials science. In the more specialized arena of laboratory-scale petrophysical rock core analysis, the role of MRI has undergone a substantial change in focus over the last three decades. Initially, alongside the continual drive to exploit higher magnetic field strengths in MRI applications for medicine and chemistry, the same trend was followed in core analysis. However, the spatial resolution achievable in heterogeneous porous media is inherently limited due to the magnetic susceptibility contrast between solid and fluid. As a result, imaging resolution at the length-scale of typical pore diameters is not practical and so MRI of core-plugs has often been viewed as an inappropriate use of expensive magnetic resonance facilities. Recently, there has been a paradigm shift in the use of MRI in laboratory-scale core analysis. The focus is now on acquiring data in the laboratory that are directly comparable to data obtained from magnetic resonance well-logging tools (i.e., a common physics of measurement). To maintain consistency with well-logging instrumentation, it is desirable to measure distributions of transverse (T2) relaxation time-the industry-standard metric in well-logging-at the laboratory-scale. These T2 distributions can be spatially resolved over the length of a core-plug. The use of low-field magnets in the laboratory environment is optimal for core analysis not only because the magnetic field strength is closer to that of well-logging tools, but also because the magnetic susceptibility contrast is minimized, allowing the acquisition of quantitative image voxel (or pixel) intensities that are directly scalable to liquid volume. Beyond simple determination of macroscopic rock heterogeneity, it is possible to utilize the spatial resolution for monitoring forced displacement of oil by water or chemical agents, determining capillary pressure curves, and estimating wettability. The history of MRI in petrophysics is reviewed and future directions considered, including advanced data processing techniques such as compressed sensing reconstruction and Bayesian inference analysis of under-sampled data. Although this review focuses on rock core analysis, the techniques described are applicable in a wider context to porous media in general, such as cements, soils, ceramics, and catalytic materials.
Alternatives to Pyrotechnic Distress Signals; Laboratory and Field Studies
2015-03-01
using night vision imaging systems (NVIS) with “minus-blue” filtering,” the project recommends additional research and testing leading to the inclusion...18 5.2.3 Background Images ...Example of image capture from radiant imaging colorimeter. ....................................................... 16 Figure 10. Laboratory setup
DOE Office of Scientific and Technical Information (OSTI.GOV)
Perrine, Kenneth A.; Hopkins, Derek F.; Lamarche, Brian L.
2005-09-01
Biologists and computer engineers at Pacific Northwest National Laboratory have specified, designed, and implemented a hardware/software system for performing real-time, multispectral image processing on a confocal microscope. This solution is intended to extend the capabilities of the microscope, enabling scientists to conduct advanced experiments on cell signaling and other kinds of protein interactions. FRET (fluorescence resonance energy transfer) techniques are used to locate and monitor protein activity. In FRET, it is critical that spectral images be precisely aligned with each other despite disturbances in the physical imaging path caused by imperfections in lenses and cameras, and expansion and contraction ofmore » materials due to temperature changes. The central importance of this work is therefore automatic image registration. This runs in a framework that guarantees real-time performance (processing pairs of 1024x1024, 8-bit images at 15 frames per second) and enables the addition of other types of advanced image processing algorithms such as image feature characterization. The supporting system architecture consists of a Visual Basic front-end containing a series of on-screen interfaces for controlling various aspects of the microscope and a script engine for automation. One of the controls is an ActiveX component written in C++ for handling the control and transfer of images. This component interfaces with a pair of LVDS image capture boards and a PCI board containing a 6-million gate Xilinx Virtex-II FPGA. Several types of image processing are performed on the FPGA in a pipelined fashion, including the image registration. The FPGA offloads work that would otherwise need to be performed by the main CPU and has a guaranteed real-time throughput. Image registration is performed in the FPGA by applying a cubic warp on one image to precisely align it with the other image. Before each experiment, an automated calibration procedure is run in order to set up the cubic warp. During image acquisitions, the cubic warp is evaluated by way of forward differencing. Unwanted pixelation artifacts are minimized by bilinear sampling. The resulting system is state-of-the-art for biological imaging. Precisely registered images enable the reliable use of FRET techniques. In addition, real-time image processing performance allows computed images to be fed back and displayed to scientists immediately, and the pipelined nature of the FPGA allows additional image processing algorithms to be incorporated into the system without slowing throughput.« less
UV Catalysis, Cyanotype Photography, and Sunscreens
NASA Astrophysics Data System (ADS)
Lawrence, Glen D.; Fishelson, Stuart
1999-09-01
This laboratory experiment is intended for a chemistry course for non-science majors. The experiment utilizes one of the earliest photographic processes, the cyanotype process, to demonstrate UV catalysis of chemical reactions. In addition to making photographic prints from negatives, the process can be used to test the effectiveness of sunscreens and the relative efficacy of the SPF (sun protection factor) rating of sunscreens. This is an inexpensive process, requiring solutions of ammonium ferric citrate and potassium ferricyanide, with options to use hydrogen peroxide and ammonium hydroxide solutions. Students can prepare their own UV-sensitized paper with the indicated chemicals and watch the photographic image appear as it is exposed to sunlight or fluorescent UV lamps in a light box designed for use in this experiment. The laboratory experiment should stimulate discussion of UV catalysis, photographic processes and photochemistry, sunscreens, and UV damage to biological organisms. The chemicals used are relatively nontoxic, and the procedure is simple enough to be used by groups of diverse ages and abilities.
Bottom-up laboratory testing of the DKIST Visible Broadband Imager (VBI)
NASA Astrophysics Data System (ADS)
Ferayorni, Andrew; Beard, Andrew; Cole, Wes; Gregory, Scott; Wöeger, Friedrich
2016-08-01
The Daniel K. Inouye Solar Telescope (DKIST) is a 4-meter solar observatory under construction at Haleakala, Hawaii [1]. The Visible Broadband Imager (VBI) is a first light instrument that will record images at the highest possible spatial and temporal resolution of the DKIST at a number of scientifically important wavelengths [2]. The VBI is a pathfinder for DKIST instrumentation and a test bed for developing processes and procedures in the areas of unit, systems integration, and user acceptance testing. These test procedures have been developed and repeatedly executed during VBI construction in the lab as part of a "test early and test often" philosophy aimed at identifying and resolving issues early thus saving cost during integration test and commissioning on summit. The VBI team recently completed a bottom up end-to-end system test of the instrument in the lab that allowed the instrument's functionality, performance, and usability to be validated against documented system requirements. The bottom up testing approach includes four levels of testing, each introducing another layer in the control hierarchy that is tested before moving to the next level. First the instrument mechanisms are tested for positioning accuracy and repeatability using a laboratory position-sensing detector (PSD). Second the real-time motion controls are used to drive the mechanisms to verify speed and timing synchronization requirements are being met. Next the high-level software is introduced and the instrument is driven through a series of end-to-end tests that exercise the mechanisms, cameras, and simulated data processing. Finally, user acceptance testing is performed on operational and engineering use cases through the use of the instrument engineering graphical user interface (GUI). In this paper we present the VBI bottom up test plan, procedures, example test cases and tools used, as well as results from test execution in the laboratory. We will also discuss the benefits realized through completion of this testing, and share lessons learned from the bottoms up testing process.
Autonomous characterization of plastic-bonded explosives
NASA Astrophysics Data System (ADS)
Linder, Kim Dalton; DeRego, Paul; Gomez, Antonio; Baumgart, Chris
2006-08-01
Plastic-Bonded Explosives (PBXs) are a newer generation of explosive compositions developed at Los Alamos National Laboratory (LANL). Understanding the micromechanical behavior of these materials is critical. The size of the crystal particles and porosity within the PBX influences their shock sensitivity. Current methods to characterize the prominent structural characteristics include manual examination by scientists and attempts to use commercially available image processing packages. Both methods are time consuming and tedious. LANL personnel, recognizing this as a manually intensive process, have worked with the Kansas City Plant / Kirtland Operations to develop a system which utilizes image processing and pattern recognition techniques to characterize PBX material. System hardware consists of a CCD camera, zoom lens, two-dimensional, motorized stage, and coaxial, cross-polarized light. System integration of this hardware with the custom software is at the core of the machine vision system. Fundamental processing steps involve capturing images from the PBX specimen, and extraction of void, crystal, and binder regions. For crystal extraction, a Quadtree decomposition segmentation technique is employed. Benefits of this system include: (1) reduction of the overall characterization time; (2) a process which is quantifiable and repeatable; (3) utilization of personnel for intelligent review rather than manual processing; and (4) significantly enhanced characterization accuracy.
BOREAS TE-18, 60-m, Radiometrically Rectified Landsat TM Imagery
NASA Technical Reports Server (NTRS)
Hall, Forrest G. (Editor); Knapp, David
2000-01-01
The BOREAS TE-18 team used a radiometric rectification process to produce standardized DN values for a series of Landsat TM images of the BOREAS SSA and NSA in order to compare images that were collected under different atmospheric conditions. The images for each study area were referenced to an image that had very clear atmospheric qualities. The reference image for the SSA was collected on 02-Sep-1994, while the reference image for the NSA was collected on 2 1 Jun-1995. The 23 rectified images cover the period of 07-Jul-1985 to 18-Sep-1994 in the SSA and 22-Jun-1984 to 09-Jun-1994 in the NSA. Each of the reference scenes had coincident atmospheric optical thickness measurements made by RSS-11. The radiometric rectification process is described in more detail by Hall et al. (1991). The original Landsat TM data were received from CCRS for use in the BOREAS project. Due to the nature of the radiometric rectification process and copyright issues, the full-resolution (30-m) images may not be publicly distributed. However, this spatially degraded 60-m resolution version of the images may be openly distributed and is available on the BOREAS CD-ROM series. After the radiometric rectification processing, the original data were degraded to a 60-m pixel size from the original 30-m pixel size by averaging the data over a 2- by 2-pixel window. The data are stored in binary image-format files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Activity Archive Center (DAAC).
Maui Space Surveillance System Satellite Categorization Laboratory
NASA Astrophysics Data System (ADS)
Deiotte, R.; Guyote, M.; Kelecy, T.; Hall, D.; Africano, J.; Kervin, P.
The MSSS satellite categorization laboratory is a fusion of robotics and digital imaging processes that aims to decompose satellite photometric characteristics and behavior in a controlled setting. By combining a robot, light source and camera to acquire non-resolved images of a model satellite, detailed photometric analyses can be performed to extract relevant information about shape features, elemental makeup, and ultimately attitude and function. Using the laboratory setting a detailed analysis can be done on any type of material or design and the results cataloged in a database that will facilitate object identification by "curve-fitting" individual elements in the basis set to observational data that might otherwise be unidentifiable. Currently the laboratory has created, an ST-Robotics five degree of freedom robotic arm, collimated light source and non-focused Apogee camera have all been integrated into a MATLAB based software package that facilitates automatic data acquisition and analysis. Efforts to date have been aimed at construction of the lab as well as validation and verification of simple geometric objects. Simple tests on spheres, cubes and simple satellites show promising results that could lead to a much better understanding of non-resolvable space object characteristics. This paper presents a description of the laboratory configuration and validation test results with emphasis on the non-resolved photometric characteristics for a variety of object shapes, spin dynamics and orientations. The future vision, utility and benefits of the laboratory to the SSA community as a whole are also discussed.
Voyager 1 Jupiter Southern Hemisphere Movie
NASA Technical Reports Server (NTRS)
2000-01-01
This movie shows a portion of Jupiter in the southern hemisphere over 17Jupiter days. Above the white belt, notice the series of atmospheric vortices headed west. Even these early approach frames show wild dynamics in the roiling environment south of the white belt. Notice the small tumbling white cloud near the center.
As Voyager 1 approached Jupiter in 1979, it took images of the planet at regular intervals. This sequence is made from 17 images taken once every Jupiter rotation period (about 10 hours). These images were acquired in the Blue filter around Feb. 1, 1979. The spacecraft was about 37 million kilometers from Jupiter at that time.This time-lapse movie was produced at JPL by the Image Processing Laboratory in 1979.Space Shuttle Main Engine Propellant Path Leak Detection Using Sequential Image Processing
NASA Technical Reports Server (NTRS)
Smith, L. Montgomery; Malone, Jo Anne; Crawford, Roger A.
1995-01-01
Initial research in this study using theoretical radiation transport models established that the occurrence of a leak is accompanies by a sudden but sustained change in intensity in a given region of an image. In this phase, temporal processing of video images on a frame-by-frame basis was used to detect leaks within a given field of view. The leak detection algorithm developed in this study consists of a digital highpass filter cascaded with a moving average filter. The absolute value of the resulting discrete sequence is then taken and compared to a threshold value to produce the binary leak/no leak decision at each point in the image. Alternatively, averaging over the full frame of the output image produces a single time-varying mean value estimate that is indicative of the intensity and extent of a leak. Laboratory experiments were conducted in which artificially created leaks on a simulated SSME background were produced and recorded from a visible wavelength video camera. This data was processed frame-by-frame over the time interval of interest using an image processor implementation of the leak detection algorithm. In addition, a 20 second video sequence of an actual SSME failure was analyzed using this technique. The resulting output image sequences and plots of the full frame mean value versus time verify the effectiveness of the system.
Satellite on-board real-time SAR processor prototype
NASA Astrophysics Data System (ADS)
Bergeron, Alain; Doucet, Michel; Harnisch, Bernd; Suess, Martin; Marchese, Linda; Bourqui, Pascal; Desnoyers, Nicholas; Legros, Mathieu; Guillot, Ludovic; Mercier, Luc; Châteauneuf, François
2017-11-01
A Compact Real-Time Optronic SAR Processor has been successfully developed and tested up to a Technology Readiness Level of 4 (TRL4), the breadboard validation in a laboratory environment. SAR, or Synthetic Aperture Radar, is an active system allowing day and night imaging independent of the cloud coverage of the planet. The SAR raw data is a set of complex data for range and azimuth, which cannot be compressed. Specifically, for planetary missions and unmanned aerial vehicle (UAV) systems with limited communication data rates this is a clear disadvantage. SAR images are typically processed electronically applying dedicated Fourier transformations. This, however, can also be performed optically in real-time. Originally the first SAR images were optically processed. The optical Fourier processor architecture provides inherent parallel computing capabilities allowing real-time SAR data processing and thus the ability for compression and strongly reduced communication bandwidth requirements for the satellite. SAR signal return data are in general complex data. Both amplitude and phase must be combined optically in the SAR processor for each range and azimuth pixel. Amplitude and phase are generated by dedicated spatial light modulators and superimposed by an optical relay set-up. The spatial light modulators display the full complex raw data information over a two-dimensional format, one for the azimuth and one for the range. Since the entire signal history is displayed at once, the processor operates in parallel yielding real-time performances, i.e. without resulting bottleneck. Processing of both azimuth and range information is performed in a single pass. This paper focuses on the onboard capabilities of the compact optical SAR processor prototype that allows in-orbit processing of SAR images. Examples of processed ENVISAT ASAR images are presented. Various SAR processor parameters such as processing capabilities, image quality (point target analysis), weight and size are reviewed.
Dual pathways to prospective remembering
McDaniel, Mark A.; Umanath, Sharda; Einstein, Gilles O.; Waldum, Emily R.
2015-01-01
According to the multiprocess framework (McDaniel and Einstein, 2000), the cognitive system can support prospective memory (PM) retrieval through two general pathways. One pathway depends on top–down attentional control processes that maintain activation of the intention and/or monitor the environment for the triggering or target cues that indicate that the intention should be executed. A second pathway depends on (bottom–up) spontaneous retrieval processes, processes that are often triggered by a PM target cue; critically, spontaneous retrieval is assumed not to require monitoring or active maintenance of the intention. Given demand characteristics associated with experimental settings, however, participants are often inclined to monitor, thereby potentially masking discovery of bottom–up spontaneous retrieval processes. In this article, we discuss parameters of laboratory PM paradigms to discourage monitoring and review recent behavioral evidence from such paradigms that implicate spontaneous retrieval in PM. We then re-examine the neuro-imaging evidence from the lens of the multiprocess framework and suggest some critical modifications to existing neuro-cognitive interpretations of the neuro-imaging results. These modifications illuminate possible directions and refinements for further neuro-imaging investigations of PM. PMID:26236213
BOREAS TE-18, 30-m, Radiometrically Rectified Landsat TM Imagery
NASA Technical Reports Server (NTRS)
Hall, Forrest G. (Editor); Knapp, David
2000-01-01
The BOREAS TE-18 team used a radiometric rectification process to produce standardized DN values for a series of Landsat TM images of the BOREAS SSA and NSA in order to compare images that were collected under different atmospheric conditions. The images for each study area were referenced to an image that had very clear atmospheric qualities. The reference image for the SSA was collected on 02-Sep-1994, while the reference image for the NSA was collected on 21-Jun-1995. the 23 rectified images cover the period of 07-Jul-1985 to 18 Sep-1994 in the SSA and from 22-Jun-1984 to 09-Jun-1994 in the NSA. Each of the reference scenes had coincident atmospheric optical thickness measurements made by RSS-11. The radiometric rectification process is described in more detail by Hall et al. (199 1). The original Landsat TM data were received from CCRS for use in the BOREAS project. The data are stored in binary image-format files. Due to the nature of the radiometric rectification process and copyright issues, these full-resolution images may not be publicly distributed. However, a spatially degraded 60-m resolution version of the images is available on the BOREAS CD-ROM series. See Sections 15 and 16 for information about how to possibly acquire the full resolution data. Information about the full-resolution images is provided in an inventory listing on the CD-ROMs. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Activity Archive Center (DAAC).
Scene Analysis: Non-Linear Spatial Filtering for Automatic Target Detection.
1982-12-01
In this thesis, a method for two-dimensional pattern recognition was developed and tested. The method included a global search scheme for candidate...test global switch TYPEO Creating negative video file only.W 11=0 12=256 13=512 14=768 GO 70 2 1 TYPE" Creating negative and horizontally flipped video...purpose was to develop a base of image processing software for the AFIT Digital Signal Processing Laboratory NOVA- ECLIPSE minicomputer system, for
Cloud Engineering Principles and Technology Enablers for Medical Image Processing-as-a-Service.
Bao, Shunxing; Plassard, Andrew J; Landman, Bennett A; Gokhale, Aniruddha
2017-04-01
Traditional in-house, laboratory-based medical imaging studies use hierarchical data structures (e.g., NFS file stores) or databases (e.g., COINS, XNAT) for storage and retrieval. The resulting performance from these approaches is, however, impeded by standard network switches since they can saturate network bandwidth during transfer from storage to processing nodes for even moderate-sized studies. To that end, a cloud-based "medical image processing-as-a-service" offers promise in utilizing the ecosystem of Apache Hadoop, which is a flexible framework providing distributed, scalable, fault tolerant storage and parallel computational modules, and HBase, which is a NoSQL database built atop Hadoop's distributed file system. Despite this promise, HBase's load distribution strategy of region split and merge is detrimental to the hierarchical organization of imaging data (e.g., project, subject, session, scan, slice). This paper makes two contributions to address these concerns by describing key cloud engineering principles and technology enhancements we made to the Apache Hadoop ecosystem for medical imaging applications. First, we propose a row-key design for HBase, which is a necessary step that is driven by the hierarchical organization of imaging data. Second, we propose a novel data allocation policy within HBase to strongly enforce collocation of hierarchically related imaging data. The proposed enhancements accelerate data processing by minimizing network usage and localizing processing to machines where the data already exist. Moreover, our approach is amenable to the traditional scan, subject, and project-level analysis procedures, and is compatible with standard command line/scriptable image processing software. Experimental results for an illustrative sample of imaging data reveals that our new HBase policy results in a three-fold time improvement in conversion of classic DICOM to NiFTI file formats when compared with the default HBase region split policy, and nearly a six-fold improvement over a commonly available network file system (NFS) approach even for relatively small file sets. Moreover, file access latency is lower than network attached storage.
Network design and quality checks in automatic orientation of close-range photogrammetric blocks.
Dall'Asta, Elisa; Thoeni, Klaus; Santise, Marina; Forlani, Gianfranco; Giacomini, Anna; Roncella, Riccardo
2015-04-03
Due to the recent improvements of automatic measurement procedures in photogrammetry, multi-view 3D reconstruction technologies are becoming a favourite survey tool. Rapidly widening structure-from-motion (SfM) software packages offer significantly easier image processing workflows than traditional photogrammetry packages. However, while most orientation and surface reconstruction strategies will almost always succeed in any given task, estimating the quality of the result is, to some extent, still an open issue. An assessment of the precision and reliability of block orientation is necessary and should be included in every processing pipeline. Such a need was clearly felt from the results of close-range photogrammetric surveys of in situ full-scale and laboratory-scale experiments. In order to study the impact of the block control and the camera network design on the block orientation accuracy, a series of Monte Carlo simulations was performed. Two image block configurations were investigated: a single pseudo-normal strip and a circular highly-convergent block. The influence of surveying and data processing choices, such as the number and accuracy of the ground control points, autofocus and camera calibration was investigated. The research highlights the most significant aspects and processes to be taken into account for adequate in situ and laboratory surveys, when modern SfM software packages are used, and evaluates their effect on the quality of the results of the surface reconstruction.
Matching rendered and real world images by digital image processing
NASA Astrophysics Data System (ADS)
Mitjà, Carles; Bover, Toni; Bigas, Miquel; Escofet, Jaume
2010-05-01
Recent advances in computer-generated images (CGI) have been used in commercial and industrial photography providing a broad scope in product advertising. Mixing real world images with those rendered from virtual space software shows a more or less visible mismatching between corresponding image quality performance. Rendered images are produced by software which quality performance is only limited by the resolution output. Real world images are taken with cameras with some amount of image degradation factors as lens residual aberrations, diffraction, sensor low pass anti aliasing filters, color pattern demosaicing, etc. The effect of all those image quality degradation factors can be characterized by the system Point Spread Function (PSF). Because the image is the convolution of the object by the system PSF, its characterization shows the amount of image degradation added to any taken picture. This work explores the use of image processing to degrade the rendered images following the parameters indicated by the real system PSF, attempting to match both virtual and real world image qualities. The system MTF is determined by the slanted edge method both in laboratory conditions and in the real picture environment in order to compare the influence of the working conditions on the device performance; an approximation to the system PSF is derived from the two measurements. The rendered images are filtered through a Gaussian filter obtained from the taking system PSF. Results with and without filtering are shown and compared measuring the contrast achieved in different final image regions.
GPR-Based Water Leak Models in Water Distribution Systems
Ayala-Cabrera, David; Herrera, Manuel; Izquierdo, Joaquín; Ocaña-Levario, Silvia J.; Pérez-García, Rafael
2013-01-01
This paper addresses the problem of leakage in water distribution systems through the use of ground penetrating radar (GPR) as a nondestructive method. Laboratory tests are performed to extract features of water leakage from the obtained GPR images. Moreover, a test in a real-world urban system under real conditions is performed. Feature extraction is performed by interpreting GPR images with the support of a pre-processing methodology based on an appropriate combination of statistical methods and multi-agent systems. The results of these tests are presented, interpreted, analyzed and discussed in this paper.
Processing of CT images for analysis of diffuse lung disease in the lung tissue research consortium
NASA Astrophysics Data System (ADS)
Karwoski, Ronald A.; Bartholmai, Brian; Zavaletta, Vanessa A.; Holmes, David; Robb, Richard A.
2008-03-01
The goal of Lung Tissue Resource Consortium (LTRC) is to improve the management of diffuse lung diseases through a better understanding of the biology of Chronic Obstructive Pulmonary Disease (COPD) and fibrotic interstitial lung disease (ILD) including Idiopathic Pulmonary Fibrosis (IPF). Participants are subjected to a battery of tests including tissue biopsies, physiologic testing, clinical history reporting, and CT scanning of the chest. The LTRC is a repository from which investigators can request tissue specimens and test results as well as semi-quantitative radiology reports, pathology reports, and automated quantitative image analysis results from the CT scan data performed by the LTRC core laboratories. The LTRC Radiology Core Laboratory (RCL), in conjunction with the Biomedical Imaging Resource (BIR), has developed novel processing methods for comprehensive characterization of pulmonary processes on volumetric high-resolution CT scans to quantify how these diseases manifest in radiographic images. Specifically, the RCL has implemented a semi-automated method for segmenting the anatomical regions of the lungs and airways. In these anatomic regions, automated quantification of pathologic features of disease including emphysema volumes and tissue classification are performed using both threshold techniques and advanced texture measures to determine the extent and location of emphysema, ground glass opacities, "honeycombing" (HC) and "irregular linear" or "reticular" pulmonary infiltrates and normal lung. Wall thickness measurements of the trachea, and its branches to the 3 rd and limited 4 th order are also computed. The methods for processing, segmentation and quantification are described. The results are reviewed and verified by an expert radiologist following processing and stored in the public LTRC database for use by pulmonary researchers. To date, over 1200 CT scans have been processed by the RCL and the LTRC project is on target for recruitment of the 2200 patients with 1800 CT scans in the repository for the 5-year effort. Ongoing analysis of the results in the LTRC database by the LTRC participating institutions and outside investigators are underway to look at the clinical and physiological significance of the imaging features of these diseases and correlate these findings with quality of life and other important prognostic indicators of severity. In the future, the quantitative measures of disease may have greater utility by showing correlation with prognosis, disease severity and other physiological parameters. These imaging features may provide non-invasive alternative endpoints or surrogate markers to alleviate the need for tissue biopsy or provide an accurate means to monitor rate of disease progression or response to therapy.
Vegetation Biochemistry: What Can Imaging Spectrometry Tell Us About Canopies?
NASA Technical Reports Server (NTRS)
Goetz, Alexander F. H.; Gao, Bo-Cai; Wessman, Carol
1991-01-01
Changes in ecosystem processes such as productivity and decomposition may be expressed in the canopy foliar chemistry resulting from altered carbon allocation patterns, metabolic processes and nutrient availability. Understanding carbon balance on land over large regions requires quantitative determination of leaf constituents such as lignin and total nitrogen from remote sensing imaging systems. Results from spectral reflectance measurements of stacked leaves in the laboratory show that spectrum matching techniques are applicable to the derivation of the equivalent liquid water thickness in plants as well as to the extraction of dry leaf matter reflectance spectra from spectra of green leaves. The residual spectra derived by subtracting water spectra from the spectra of green leaves shows a feature at 1.72 micrometers that can be related to the lignin content of the leaves. Oak leaves have a deeper residual absorption feature than do cotton leaves which is consistent with their relative lignin content. Similar results are achieved when deriving the residuals from images taken over areas of grass and pine trees. Imaging spectrometry provides promise in developing images of various foliar biochemical constituents.
The Influence of Pets on Infants’ Processing of Cat and Dog Images
Hurley, Karinna B.; Kovack-Lesh, Kristine A.; Oakes, Lisa M.
2010-01-01
We examined how experience at home with pets is related to infants’ processing of animal stimuli in a standard laboratory procedure. We presented 6-month-old infants with photographs of cats or dogs and found that infants with pets at home (N = 40) responded differently to the pictures than infants without pets (N = 40). These results suggest that infants’ experience in one context (at home) contributes to their processing of similar stimuli in a different context (the lab), and have implications for how infants’ early experience shapes basic cognitive processing. PMID:20728223
1992-02-10
The image shows a test cell of Crystal Growth experiment inside the Vapor Crystal Growth System (VCGS) furnace aboard the STS-42, International Microgravity Laboratory-1 (IML-1), mission. The goal of IML-1, a pressurized marned Spacelab module, was to explore in depth the complex effects of weightlessness of living organisms and materials processing. More than 200 scientists from 16 countires participated in the investigations.
NASA Technical Reports Server (NTRS)
2007-01-01
In this processed Spitzer Space Telescope image, baby star HH 46/47 can be seen blowing two massive 'bubbles.' The star is 1,140 light-years away from Earth. The infant star can be seen as a white spot toward the center of the Spitzer image. The two bubbles are shown as hollow elliptical shells of bluish-green material extending from the star. Wisps of green in the image reveal warm molecular hydrogen gas, while the bluish tints are formed by starlight scattered by surrounding dust. These bubbles formed when powerful jets of gas, traveling at 200 to 300 kilometers per second, or about 120 to 190 miles per second, smashed into the cosmic cloud of gas and dust that surrounds HH 46/47. The red specks at the end of each bubble show the presence of hot sulfur and iron gas where the star's narrow jets are currently crashing head-on into the cosmic cloud's gas and dust material. Whenever astronomers observe a star, or snap a stellar portrait, through the lens of any telescope, they know that what they are seeing is slightly blurred. To clear up the blurring in Spitzer images, astronomers at the Jet Propulsion Laboratory developed an image processing technique for Spitzer called Hi-Res deconvolution. This process reduces blurring and makes the image sharper and cleaner, enabling astronomers to see the emissions around forming stars in greater detail. When scientists applied this image processing technique to the Spitzer image of HH 46/47, they were able to see winds from the star and jets of gas that are carving the celestial bubbles. This infrared image is a three-color composite, with data at 3.6 microns represented in blue, 4.5 and 5.8 microns shown in green, and 24 microns represented as red.Automatic analysis of microscopic images of red blood cell aggregates
NASA Astrophysics Data System (ADS)
Menichini, Pablo A.; Larese, Mónica G.; Riquelme, Bibiana D.
2015-06-01
Red blood cell aggregation is one of the most important factors in blood viscosity at stasis or at very low rates of flow. The basic structure of aggregates is a linear array of cell commonly termed as rouleaux. Enhanced or abnormal aggregation is seen in clinical conditions, such as diabetes and hypertension, producing alterations in the microcirculation, some of which can be analyzed through the characterization of aggregated cells. Frequently, image processing and analysis for the characterization of RBC aggregation were done manually or semi-automatically using interactive tools. We propose a system that processes images of RBC aggregation and automatically obtains the characterization and quantification of the different types of RBC aggregates. Present technique could be interesting to perform the adaptation as a routine used in hemorheological and Clinical Biochemistry Laboratories because this automatic method is rapid, efficient and economical, and at the same time independent of the user performing the analysis (repeatability of the analysis).
The current and ideal state of anatomic pathology patient safety.
Raab, Stephen Spencer
2014-01-01
An anatomic pathology diagnostic error may be secondary to a number of active and latent technical and/or cognitive components, which may occur anywhere along the total testing process in clinical and/or laboratory domains. For the pathologist interpretive steps of diagnosis, we examine Kahneman's framework of slow and fast thinking to explain different causes of error in precision (agreement) and in accuracy (truth). The pathologist cognitive diagnostic process involves image pattern recognition and a slow thinking error may be caused by the application of different rationally-constructed mental maps of image criteria/patterns by different pathologists. This type of error is partly related to a system failure in standardizing the application of these maps. A fast thinking error involves the flawed leap from image pattern to incorrect diagnosis. In the ideal state, anatomic pathology systems would target these cognitive error causes as well as the technical latent factors that lead to error.
UWGSP7: a real-time optical imaging workstation
NASA Astrophysics Data System (ADS)
Bush, John E.; Kim, Yongmin; Pennington, Stan D.; Alleman, Andrew P.
1995-04-01
With the development of UWGSP7, the University of Washington Image Computing Systems Laboratory has a real-time workstation for continuous-wave (cw) optical reflectance imaging. Recent discoveries in optical science and imaging research have suggested potential practical use of the technology as a medical imaging modality and identified the need for a machine to support these applications in real time. The UWGSP7 system was developed to provide researchers with a high-performance, versatile tool for use in optical imaging experiments with the eventual goal of bringing the technology into clinical use. One of several major applications of cw optical reflectance imaging is tumor imaging which uses a light-absorbing dye that preferentially sequesters in tumor tissue. This property could be used to locate tumors and to identify tumor margins intraoperatively. Cw optical reflectance imaging consists of illumination of a target with a band-limited light source and monitoring the light transmitted by or reflected from the target. While continuously illuminating the target, a control image is acquired and stored. A dye is injected into a subject and a sequence of data images are acquired and processed. The data images are aligned with the control image and then subtracted to obtain a signal representing the change in optical reflectance over time. This signal can be enhanced by digital image processing and displayed in pseudo-color. This type of emerging imaging technique requires a computer system that is versatile and adaptable. The UWGSP7 utilizes a VESA local bus PC as a host computer running the Windows NT operating system and includes ICSL developed add-on boards for image acquisition and processing. The image acquisition board is used to digitize and format the analog signal from the input device into digital frames and to the average frames into images. To accommodate different input devices, the camera interface circuitry is designed in a small mezzanine board that supports the RS-170 standard. The image acquisition board is connected to the image- processing board using a direct connect port which provides a 66 Mbytes/s channel independent of the system bus. The image processing board utilizes the Texas Instruments TMS320C80 Multimedia Video Processor chip. This chip is capable of 2 billion operations per second providing the UWGSP7 with the capability to perform real-time image processing functions like median filtering, convolution and contrast enhancement. This processing power allows interactive analysis of the experiments as compared to current practice of off-line processing and analysis. Due to its flexibility and programmability, the UWGSP7 can be adapted into various research needs in intraoperative optical imaging.
High-frame-rate digital radiographic videography
NASA Astrophysics Data System (ADS)
King, Nicholas S. P.; Cverna, Frank H.; Albright, Kevin L.; Jaramillo, Steven A.; Yates, George J.; McDonald, Thomas E.; Flynn, Michael J.; Tashman, Scott
1994-10-01
High speed x-ray imaging can be an important tool for observing internal processes in a wide range of applications. In this paper we describe preliminary implementation of a system having the eventual goal of observing the internal dynamics of bone and joint reactions during loading. Two Los Alamos National Laboratory (LANL) gated and image intensified camera systems were used to record images from an x-ray image convertor tube to demonstrate the potential of high frame-rate digital radiographic videography in the analysis of bone and joint dynamics of the human body. Preliminary experiments were done at LANL to test the systems. Initial high frame-rate imaging (from 500 to 1000 frames/s) of a swinging pendulum mounted to the face of an X-ray image convertor tube demonstrated high contrast response and baseline sensitivity. The systems were then evaluated at the Motion Analysis Laboratory of Henry Ford Health Systems Bone and Joint Center. Imaging of a 9 inch acrylic disk with embedded lead markers rotating at approximately 1000 RPM, demonstrated the system response to a high velocity/high contrast target. By gating the P-20 phosphor image from the X-ray image convertor with a second image intensifier (II) and using a 100 microsecond wide optical gate through the second II, enough prompt light decay from the x-ray image convertor phosphor had taken place to achieve reduction of most of the motion blurring. Measurement of the marker velocity was made by using video frames acquired at 500 frames/s. The data obtained from both experiments successfully demonstrated the feasibility of the technique. Several key areas for improvement are discussed along with salient test results and experiment details.
3D Printing and Digital Rock Physics for Geomaterials
NASA Astrophysics Data System (ADS)
Martinez, M. J.; Yoon, H.; Dewers, T. A.
2015-12-01
Imaging techniques for the analysis of porous structures have revolutionized our ability to quantitatively characterize geomaterials. Digital representations of rock from CT images and physics modeling based on these pore structures provide the opportunity to further advance our quantitative understanding of fluid flow, geomechanics, and geochemistry, and the emergence of coupled behaviors. Additive manufacturing, commonly known as 3D printing, has revolutionized production of custom parts with complex internal geometries. For the geosciences, recent advances in 3D printing technology may be co-opted to print reproducible porous structures derived from CT-imaging of actual rocks for experimental testing. The use of 3D printed microstructure allows us to surmount typical problems associated with sample-to-sample heterogeneity that plague rock physics testing and to test material response independent from pore-structure variability. Together, imaging, digital rocks and 3D printing potentially enables a new workflow for understanding coupled geophysical processes in a real, but well-defined setting circumventing typical issues associated with reproducibility, enabling full characterization and thus connection of physical phenomena to structure. In this talk we will discuss the possibilities that these technologies can bring to geosciences and present early experiences with coupled multiscale experimental and numerical analysis using 3D printed fractured rock specimens. In particular, we discuss the processes of selection and printing of transparent fractured specimens based on 3D reconstruction of micro-fractured rock to study fluid flow characterization and manipulation. Micro-particle image velocimetry is used to directly visualize 3D single and multiphase flow velocity in 3D fracture networks. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.
Healthcare reform for imagers: finding a way forward now.
Douglas, Pamela S; Picard, Michael H
2013-03-01
The changing healthcare environment presents many challenges to cardiovascular imagers. This perspective paper uses current trends to propose strategies that cardiovascular imagers can follow to lead in managing change and developing the imaging laboratory of the future. In the area of quality, imagers are encouraged to follow guidelines and standards, implement structured reporting and laboratory databases, adopt ongoing quality improvement programs, and use benchmarks to confirm imaging quality. In the area of access, imagers are encouraged to enhance availability of testing, focus on patient and referring physician value and satisfaction, collaboratively implement new technologies and uses of imaging, integrate health information technology in the laboratory, and work toward the appropriate inclusion of imaging in new healthcare delivery models. In the area of cost, imagers are encouraged to minimize laboratory operating expenses without compromising quality, and to take an active role in care redesign initiatives to ensure that imaging is utilized appropriately and at proper time intervals. Imagers are also encouraged to learn leadership and management skills, undertake strategic planning exercises, and build strong, collaborative teams. Although it is difficult to predict the future of cardiovascular imaging delivery, a reasonable sense of the likely direction of many changes and careful attention to the fundamentals of good health care (quality, access, and cost) can help imagers to thrive now and in the future. Copyright © 2013 American College of Cardiology Foundation. Published by Elsevier Inc. All rights reserved.
NASA Technical Reports Server (NTRS)
Snell, E. H.; vanderWoerd, M. J.; Miller, M. D.; Deacon, A. M.
2004-01-01
We demonstrate the use of inbred imaging to locate crystals mounted in cryoloops and cryopreserved in a nitrogen gas stream at 100K. In the home laboratory crystals are clearly seen in the infrared images with light transmitting through the sample while irradiating the crystal from behind, and with illumination from a direction perpendicular to the direction of view. The crystals transmit and reflect infrared radiation differently from the surrounding mother liquor and loop. Because of differences in contrast between crystals and their surrounding mother liquor, it is possible to clearly identify the crystal position. In use at the synchrotron, with robotically mounted crystals the small depth of field of the lens required the recording of multiple images at different focal points. Image processing techniques were then used to produce a clear image of the crystal. The resulting infrared images and intensity profiles show that infrared imaging can be a powerful complement to visual imaging in locating crystals in cryocooled loops.
Emerging technology: applications of Raman spectroscopy for prostate cancer.
Kast, Rachel E; Tucker, Stephanie C; Killian, Kevin; Trexler, Micaela; Honn, Kenneth V; Auner, Gregory W
2014-09-01
There is a need in prostate cancer diagnostics and research for a label-free imaging methodology that is nondestructive, rapid, objective, and uninfluenced by water. Raman spectroscopy provides a molecular signature, which can be scaled from micron-level regions of interest in cells to macroscopic areas of tissue. It can be used for applications ranging from in vivo or in vitro diagnostics to basic science laboratory testing. This work describes the fundamentals of Raman spectroscopy and complementary techniques including surface enhanced Raman scattering, resonance Raman spectroscopy, coherent anti-Stokes Raman spectroscopy, confocal Raman spectroscopy, stimulated Raman scattering, and spatially offset Raman spectroscopy. Clinical applications of Raman spectroscopy to prostate cancer will be discussed, including screening, biopsy, margin assessment, and monitoring of treatment efficacy. Laboratory applications including cell identification, culture monitoring, therapeutics development, and live imaging of cellular processes are discussed. Potential future avenues of research are described, with emphasis on multiplexing Raman spectroscopy with other modalities.
Erberich, Stephan G; Bhandekar, Manasee; Chervenak, Ann; Kesselman, Carl; Nelson, Marvin D
2007-01-01
Functional MRI is successfully being used in clinical and research applications including preoperative planning, language mapping, and outcome monitoring. However, clinical use of fMRI is less widespread due to its complexity of imaging, image workflow, post-processing, and lack of algorithmic standards hindering result comparability. As a consequence, wide-spread adoption of fMRI as clinical tool is low contributing to the uncertainty of community physicians how to integrate fMRI into practice. In addition, training of physicians with fMRI is in its infancy and requires clinical and technical understanding. Therefore, many institutions which perform fMRI have a team of basic researchers and physicians to perform fMRI as a routine imaging tool. In order to provide fMRI as an advanced diagnostic tool to the benefit of a larger patient population, image acquisition and image post-processing must be streamlined, standardized, and available at any institution which does not have these resources available. Here we describe a software architecture, the functional imaging laboratory (funcLAB/G), which addresses (i) standardized image processing using Statistical Parametric Mapping and (ii) its extension to secure sharing and availability for the community using standards-based Grid technology (Globus Toolkit). funcLAB/G carries the potential to overcome the limitations of fMRI in clinical use and thus makes standardized fMRI available to the broader healthcare enterprise utilizing the Internet and HealthGrid Web Services technology.
Isn't it time to abandon cine film?
Holmes, D R; Wondrow, M A; Gray, J E
1990-05-01
Cine has served our needs well since the early 1950s. For the first time, it allowed recording of motion studies of the cardiac structures on film. The cine technique has been standardized over the years, both the camera and the display. Cine filming techniques, however, have not advanced, except for new film products with faster emulsions and better-quality films. Video electronic imaging has made rapid advancements. These were prompted by the broadcast industry when the requirements for color were developed in the 1960s and by the advent of new recording techniques that provided a very stable video time base from analog tape recorders. The medical field has been able to capitalize on these developments and to produce some of our own that have not been applied in the broadcast world. These include pulsed progressive 525-line video acquisition of cardiac images in the cardiac catheterization laboratory. We also have been able to capitalize on the improved detector technology that the broadcast world has developed, such as the plumbicon pickup tubes, which produce images with very little lag and so provide images with improved resolution. These developments also have enabled us to reduce radiation to both the patient and the laboratory personnel, especially with implementation of the pulsed progressive acquisition, with which the dose has been reduced 50%. With the advent of interventional procedures in the cardiac catheterization laboratory, the need to assess images immediately cannot be fulfilled by cine filming because of the requirement for the processing of the film with its inherent delays. Quantification of cardiac structures is required to assess the outcome of interventional techniques.(ABSTRACT TRUNCATED AT 250 WORDS)
2011-01-01
When applying echo-Doppler imaging for either clinical or research purposes it is very important to select the most adequate modality/technology and choose the most reliable and reproducible measurements. Quality control is a mainstay to reduce variability among institutions and operators and must be obtained by using appropriate procedures for data acquisition, storage and interpretation of echo-Doppler data. This goal can be achieved by employing an echo core laboratory (ECL), with the responsibility for standardizing image acquisition processes (performed at the peripheral echo-labs) and analysis (by monitoring and optimizing the internal intra- and inter-reader variability of measurements). Accordingly, the Working Group of Echocardiography of the Italian Society of Cardiology decided to design standardized procedures for imaging acquisition in peripheral laboratories and reading procedures and to propose a methodological approach to assess the reproducibility of echo-Doppler parameters of cardiac structure and function by using both standard and advanced technologies. A number of cardiologists experienced in cardiac ultrasound was involved to set up an ECL available for future studies involving complex imaging or including echo-Doppler measures as primary or secondary efficacy or safety end-points. The present manuscript describes the methodology of the procedures (imaging acquisition and measurement reading) and provides the documentation of the work done so far to test the reproducibility of the different echo-Doppler modalities (standard and advanced). These procedures can be suggested for utilization also in non referall echocardiographic laboratories as an "inside" quality check, with the aim at optimizing clinical consistency of echo-Doppler data. PMID:21943283
NASA Technical Reports Server (NTRS)
2000-01-01
This is the original Voyager 'Blue Movie' (so named because it was built from Blue filter images). It records the approach of Voyager 1 during a period of over 60 Jupiter days. Notice the difference in speed and direction of the various zones of the atmosphere. The interaction of the atmospheric clouds and storms shows how dynamic the Jovian atmosphere is.As Voyager 1 approached Jupiter in 1979, it took images of the planet at regular intervals. This sequence is made from 66 images taken once every Jupiter rotation period (about 10 hours). This time-lapse movie uses images taken every time Jupiter longitude 68W passed under the spacecraft. These images were acquired in the Blue filter from Jan. 6 to Feb. 3 1979. The spacecraft flew from 58 million kilometers to 31 million kilometers from Jupiter during that time.This time-lapse movie was produced at JPL by the Image Processing Laboratory in 1979.NASA Technical Reports Server (NTRS)
2008-01-01
This image, and many like it, are one way NASA's Phoenix Mars Lander is measuring trace amounts of water vapor in the atmosphere over far-northern Mars. Phoenix's Surface Stereo Imager (SSI) uses solar filters, or filters designed to image the sun, to make these images. The camera is aimed at the sky for long exposures. SSI took this image as a test on June 9, 2008, which was the Phoenix mission's 15th Martian day, or sol, since landing, at 5:20 p.m. local solar time. The camera was pointed about 38 degrees above the horizon. The white dots in the sky are detector dark current that will be removed during image processing and analysis. The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin SpaceClassification of Korla fragrant pears using NIR hyperspectral imaging analysis
NASA Astrophysics Data System (ADS)
Rao, Xiuqin; Yang, Chun-Chieh; Ying, Yibin; Kim, Moon S.; Chao, Kuanglin
2012-05-01
Korla fragrant pears are small oval pears characterized by light green skin, crisp texture, and a pleasant perfume for which they are named. Anatomically, the calyx of a fragrant pear may be either persistent or deciduous; the deciduouscalyx fruits are considered more desirable due to taste and texture attributes. Chinese packaging standards require that packed cases of fragrant pears contain 5% or less of the persistent-calyx type. Near-infrared hyperspectral imaging was investigated as a potential means for automated sorting of pears according to calyx type. Hyperspectral images spanning the 992-1681 nm region were acquired using an EMCCD-based laboratory line-scan imaging system. Analysis of the hyperspectral images was performed to select wavebands useful for identifying persistent-calyx fruits and for identifying deciduous-calyx fruits. Based on the selected wavebands, an image-processing algorithm was developed that targets automated classification of Korla fragrant pears into the two categories for packaging purposes.
1979-01-24
Photo by Voyager 1 (JPL) The spacecraft took this photo of the planet Jupiter on Jan 24, while still more than 25 million miles (40 million kilometers) away. As the spacecraft draws closer to the planet (about 1 million kilometers a day) more details are emergng in the turbulent clouds. The Great Red Spot shows prominently below center, surrounded by what scientists call a remarkably complex region of the giant planet's atmosphere. An elongated yellow cloud within the Great Red Spot is swirling around the spot's interior boundary in a counterclockwise direction with a period of a little less than six days, confirming the whirlpool-like circulation that astronomers have suspected from ground-based photographs. Ganymede, Jupiter's largest satellite, can be seen to the lower left of the planet. Ganymede is a planet-sized body larger than Mercury. This color photo was assembled at Jet Propulsion Laboratory's Image Processing Lab from there black and white images taken through filters. The Voyagers are managed for NASA's Office of Space Science by Jet Propulsion Laboratory. (ref: P-20945C Mission Image 1-9)
A novel method about detecting missing holes on the motor carling
NASA Astrophysics Data System (ADS)
Xu, Hongsheng; Tan, Hao; Li, Guirong
2018-03-01
After a deep analysis on how to use an image processing system to detect the missing holes on the motor carling, we design the whole system combined with the actual production conditions of the motor carling. Afterwards we explain the whole system's hardware and software in detail. We introduce the general functions for the system's hardware and software. Analyzed these general functions, we discuss the modules of the system's hardware and software and the theory to design these modules in detail. The measurement to confirm the area to image processing, edge detection, randomized Hough transform to circle detecting is explained in detail. Finally, the system result tested in the laboratory and in the factory is given out.
Noise Estimation and Quality Assessment of Gaussian Noise Corrupted Images
NASA Astrophysics Data System (ADS)
Kamble, V. M.; Bhurchandi, K.
2018-03-01
Evaluating the exact quantity of noise present in an image and quality of an image in the absence of reference image is a challenging task. We propose a near perfect noise estimation method and a no reference image quality assessment method for images corrupted by Gaussian noise. The proposed methods obtain initial estimate of noise standard deviation present in an image using the median of wavelet transform coefficients and then obtains a near to exact estimate using curve fitting. The proposed noise estimation method provides the estimate of noise within average error of +/-4%. For quality assessment, this noise estimate is mapped to fit the Differential Mean Opinion Score (DMOS) using a nonlinear function. The proposed methods require minimum training and yields the noise estimate and image quality score. Images from Laboratory for image and Video Processing (LIVE) database and Computational Perception and Image Quality (CSIQ) database are used for validation of the proposed quality assessment method. Experimental results show that the performance of proposed quality assessment method is at par with the existing no reference image quality assessment metric for Gaussian noise corrupted images.
Development of the Science Data System for the International Space Station Cold Atom Lab
NASA Technical Reports Server (NTRS)
van Harmelen, Chris; Soriano, Melissa A.
2015-01-01
Cold Atom Laboratory (CAL) is a facility that will enable scientists to study ultra-cold quantum gases in a microgravity environment on the International Space Station (ISS) beginning in 2016. The primary science data for each experiment consists of two images taken in quick succession. The first image is of the trapped cold atoms and the second image is of the background. The two images are subtracted to obtain optical density. These raw Level 0 atom and background images are processed into the Level 1 optical density data product, and then into the Level 2 data products: atom number, Magneto-Optical Trap (MOT) lifetime, magnetic chip-trap atom lifetime, and condensate fraction. These products can also be used as diagnostics of the instrument health. With experiments being conducted for 8 hours every day, the amount of data being generated poses many technical challenges, such as downlinking and managing the required data volume. A parallel processing design is described, implemented, and benchmarked. In addition to optimizing the data pipeline, accuracy and speed in producing the Level 1 and 2 data products is key. Algorithms for feature recognition are explored, facilitating image cropping and accurate atom number calculations.
Rowan, L.C.; Mars, J.C.; Simpson, C.J.
2005-01-01
Spectral measurements made in the Mordor Pound, NT, Australia study area using the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER), in the laboratory and in situ show dominantly Al-OH and ferric-iron VNIR-SWIR absorption features in felsic rock spectra and ferrous-iron and Fe,Mg-OH features in the mafic-ultramafic rock spectra. ASTER ratio images, matched-filter, and spectral-angle mapper processing (SAM) were evaluated for mapping the lithologies. Matched-filter processing in which VNIR + SWIR image spectra were used for reference resulted in 4 felsic classes and 4 mafic-ultramafic classes based on Al-OH or Fe,Mg-OH absorption features and, in some, subtle reflectance differences related to differential weathering and vegetation. These results were similar to those obtained by match-filter analysis of HyMap data from a previous study, but the units were more clearly demarcated in the HyMap image. ASTER TIR spectral emittance data and laboratory emissivity measurements document a wide wavelength range of Si-O spectral features, which reflect the lithological diversity of the Mordor ultramafic complex and adjacent rocks. SAM processing of the spectral emittance data distinguished 2 classes representing the mafic-ultramafic rocks and 4 classes comprising the quartzose to intermediate composition rocks. Utilization of the complementary attributes of the spectral reflectance and spectral emittance data resulted in discrimination of 4 mafic-ultramafic categories; 3 categories of alluvial-colluvial deposits; and a significantly more completely mapped quartzite unit than could be accomplished by using either data set alone. ?? 2005 Elsevier Inc. All rights reserved.
NASA Astrophysics Data System (ADS)
Vhurumuku, Elaosi; Holtman, Lorna; Mikalsen, Oyvind; Kolsto, Stein D.
2006-02-01
This study investigates the proximal and distal images of the nature of science (NOS) that A-level students develop from their participation in chemistry laboratory work. We also explored the nature of the interactions among the students' proximal and distal images of the NOS and students' participation in laboratory work. Students' views of the NOS and the nature of their chemistry laboratory work were elicited through students' responses to an open-ended questionnaire and semistructured interviews. The results suggest that students build some understandings of the NOS from their participation in laboratory work. Students' proximal NOS understandings appear to build into and interact with their understandings of the nature and practice of professional science. This interaction appears to be mediated by the nature of instruction. It is posited that each student's conceptual ecological system is replete with interactions, which govern attenuation of proximal understandings into distal images. Methodologically, the study illustrates how students' laboratory work-based proximal and distal images of the NOS can be identified and extracted through analyzing and interpreting their responses to protocols. Implications for A-level Chemistry instruction and curriculum development are raised.
High dynamic range hyperspectral imaging for camouflage performance test and evaluation
NASA Astrophysics Data System (ADS)
Pearce, D.; Feenan, J.
2016-10-01
This paper demonstrates the use of high dynamic range processing applied to the specific technique of hyper-spectral imaging with linescan spectrometers. The technique provides an improvement in signal to noise for reflectance estimation. This is demonstrated for field measurements of rural imagery collected from a ground-based linescan spectrometer of rural scenes. Once fully developed, the specific application is expected to improve the colour estimation approaches and consequently the test and evaluation accuracy of camouflage performance tests. Data are presented on both field and laboratory experiments that have been used to evaluate the improvements granted by the adoption of high dynamic range data acquisition in the field of hyperspectral imaging. High dynamic ranging imaging is well suited to the hyperspectral domain due to the large variation in solar irradiance across the visible and short wave infra-red (SWIR) spectrum coupled with the wavelength dependence of the nominal silicon detector response. Under field measurement conditions it is generally impractical to provide artificial illumination; consequently, an adaptation of the hyperspectral imaging and re ectance estimation process has been developed to accommodate the solar spectrum. This is shown to improve the signal to noise ratio for the re ectance estimation process of scene materials in the 400-500 nm and 700-900 nm regions.
Evaluating minerals of environmental concern using spectroscopy
Swayze, G.A.; Clark, R.N.; Higgins, C.T.; Kokaly, R.F.; Livo, K. Eric; Hoefen, T.M.; Ong, C.; Kruse, F.A.
2006-01-01
Imaging spectroscopy has been successfully used to aid researchers in characterizing potential environmental impacts posed by acid-rock drainage, ore-processing dust on mangroves, and asbestos in serpentine mineral deposits and urban dust. Many of these applications synergistically combine field spectroscopy with remote sensing data, thus allowing more-precise data calibration, spectral analysis of the data, and verification of mapping. The increased accuracy makes these environmental evaluation tools efficient because they can be used to focus field work on those areas most critical to the research effort. The use of spectroscopy to evaluate minerals of environmental concern pushes current imaging spectrometer technology to its limits; we present laboratory results that indicate the direction for future designs of imaging spectrometers.
Science and Technology Review June 2005
DOE Office of Scientific and Technical Information (OSTI.GOV)
Aufderheide, M
2005-05-03
This is the articles in this month's issue: (1) Close Collaborations Advance Progress in Genomic Research--Commentary by Elbert Branscomb; (2) Mining Genomes--Livermore computer programs help locate the stretches of DNA in gene deserts that regulate protein-making genes; (3) Shedding Light on Quantum Physics--Laboratory laser research builds from the foundation of Einstein's description of the quantization of light. (4) The Sharper Image for Surveillance--Speckle imaging-an image-processing technique used in astronomy is bringing long-distance surveillance into sharper focus. (5) Keeping Cool Close to the Sun--The specially coated gamma-ray spectrometer aboard the MESSENGER spacecraft will help scientists determine the abundance of elements inmore » Mercury's crust.« less
Naidu, Venkata Ramana; Deshpande, Rucha S; Syed, Moinuddin R; Wakte, Pravin S
2018-07-01
A direct imaging system (Eyecon TM ) was used as a Process Analytical Technology (PAT) tool to monitor fluid bed coating process. Eyecon TM generated real-time onscreen images, particle size and shape information of two identically manufactured laboratory-scale batches. Eyecon TM has accuracy of measuring the particle size increase of ±1 μm on particles in the size range of 50-3000 μm. Eyecon TM captured data every 2 s during the entire process. The moving average of D90 particle size values recorded by Eyecon TM were calculated for every 30 min to calculate the radial coating thickness of coated particles. After the completion of coating process, the radial coating thickness was found to be 11.3 and 9.11 μm, with a standard deviation of ±0.68 and 1.8 μm for Batch 1 and Batch 2, respectively. The coating thickness was also correlated with percent weight build-up by gel permeation chromatography (GPC) and dissolution. GPC indicated weight build-up of 10.6% and 9.27% for Batch 1 and Batch 2, respectively. In conclusion, weight build-up of 10% can also be correlated with 10 ± 2 μm increase in the coating thickness of pellets, indicating the potential applicability of real-time imaging as an endpoint determination tool for fluid bed coating process.
Knowledge-based imaging-sensor fusion system
NASA Technical Reports Server (NTRS)
Westrom, George
1989-01-01
An imaging system which applies knowledge-based technology to supervise and control both sensor hardware and computation in the imaging system is described. It includes the development of an imaging system breadboard which brings together into one system work that we and others have pursued for LaRC for several years. The goal is to combine Digital Signal Processing (DSP) with Knowledge-Based Processing and also include Neural Net processing. The system is considered a smart camera. Imagine that there is a microgravity experiment on-board Space Station Freedom with a high frame rate, high resolution camera. All the data cannot possibly be acquired from a laboratory on Earth. In fact, only a small fraction of the data will be received. Again, imagine being responsible for some experiments on Mars with the Mars Rover: the data rate is a few kilobits per second for data from several sensors and instruments. Would it not be preferable to have a smart system which would have some human knowledge and yet follow some instructions and attempt to make the best use of the limited bandwidth for transmission. The system concept, current status of the breadboard system and some recent experiments at the Mars-like Amboy Lava Fields in California are discussed.
Arrigoni, Simone; Turra, Giovanni; Signoroni, Alberto
2017-09-01
With the rapid diffusion of Full Laboratory Automation systems, Clinical Microbiology is currently experiencing a new digital revolution. The ability to capture and process large amounts of visual data from microbiological specimen processing enables the definition of completely new objectives. These include the direct identification of pathogens growing on culturing plates, with expected improvements in rapid definition of the right treatment for patients affected by bacterial infections. In this framework, the synergies between light spectroscopy and image analysis, offered by hyperspectral imaging, are of prominent interest. This leads us to assess the feasibility of a reliable and rapid discrimination of pathogens through the classification of their spectral signatures extracted from hyperspectral image acquisitions of bacteria colonies growing on blood agar plates. We designed and implemented the whole data acquisition and processing pipeline and performed a comprehensive comparison among 40 combinations of different data preprocessing and classification techniques. High discrimination performance has been achieved also thanks to improved colony segmentation and spectral signature extraction. Experimental results reveal the high accuracy and suitability of the proposed approach, driving the selection of most suitable and scalable classification pipelines and stimulating clinical validations. Copyright © 2017 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Cilona, A.; Arzilli, F.; Mancini, L.; Emanuele, T.
2014-12-01
Porous carbonates form important reservoirs for water and hydrocarbons. The fluid flow properties of carbonate reservoirs may be affected by post-depositional processes (e.g., mechanical and chemical), which need to be quantified. Field-based studies described bed-parallel compaction bands (CBs) within carbonates with a wide range of porosities. These burial-related structures accommodate volumetric strain by grain rotation, translation, pore collapse and pressure solution. Recently, the same structures have been reproduced for the first time in the laboratory by performing triaxial compaction experiments on porous grainstones. These laboratory studies characterized and compared the microstructures of natural and laboratory CBs, but no analysis of pore connectivity has been performed. In this paper, we use an innovative approach to characterize the pore networks (e.g. porosity, connectivity) of natural and laboratory CBs and compare them with the host rock one. We collected the data using the synchrotron X-ray computed microtomography technique at the SYRMEP beamline of the Elettra-Sincrotrone Trieste Laboratory (Italy). Quantitative analyses of the samples were performed with the Pore3D software library. The porosity was calculated from segmented 3D images of pristine and deformed carbonates. A process of skeletonization was then applied to quantify the number of connected pores within the rock volume. The analysis of the skeleton allowed us to highlight the differences between natural and laboratory CBs, and to investigate how pore connectivity evolves as a function of different deformation pathways. Both pore volume and connectivity are reduced within the CBs respect to the pristine rock and the natural CB has a lower porosity with respect to the laboratory one. The grain contacts in the natural CB are welded, whereas in the laboratory one they have more irregular shapes and grain crushing is the predominant process.
Use of a Fluorometric Imaging Plate Reader in high-throughput screening
NASA Astrophysics Data System (ADS)
Groebe, Duncan R.; Gopalakrishnan, Sujatha; Hahn, Holly; Warrior, Usha; Traphagen, Linda; Burns, David J.
1999-04-01
High-throughput screening (HTS) efforts at Abbott Laboratories have been greatly facilitated by the use of a Fluorometric Imaging Plate Reader. The FLIPR consists of an incubated cabinet with integrated 96-channel pipettor and fluorometer. An argon laser is used to excite fluorophores in a 96-well microtiter plate and the emitted fluorometer. An argon laser is used to excite fluorophores in a 96-well microtiter plate and the emitted fluorescence is imaged by a cooled CCD camera. The image data is downloaded from the camera and processed to average the signal form each well of the microtiter pate for each time point. The data is presented in real time on the computer screen, facilitating interpretation and trouble-shooting. In addition to fluorescence, the camera can also detect luminescence form firefly luciferase.
Measurement of temperature changes in cooling dead rats using magnetic resonance thermometry.
Kuribayashi, Hideto; Cui, Fanlai; Hirakawa, Keiko; Kanawaku, Yoshimasa; Ohno, Youkichi
2011-11-01
Magnetic resonance imaging thermometry has been introduced as a technique for measurement of temperature changes in cooling dead rats. Rat pelvic magnetic resonance images were acquired sequentially more than 2h after euthanasia by halothane overdose. A series of temperature difference maps in cooling dead rats was obtained with calculating imaging phase changes induced by the water proton frequency shift caused by temperature changes. Different cooling processes were monitored by the temperature difference maps in the rats. Magnetic resonance imaging thermometry applied in the study of laboratory animals could theoretically reproduce a variety of causes of death with different environmental conditions. Outcomes from experimental animal studies could be translated into a temperature-based time of death estimation in forensics. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.
Thaden, Jeremy J; Tsang, Michael Y; Ayoub, Chadi; Padang, Ratnasari; Nkomo, Vuyisile T; Tucker, Stephen F; Cassidy, Cynthia S; Bremer, Merri; Kane, Garvan C; Pellikka, Patricia A
2017-08-01
It is presumed that echocardiographic laboratory accreditation leads to improved quality, but there are few data. We sought to compare the quality of echocardiographic examinations performed at accredited versus nonaccredited laboratories for the evaluation of valvular heart disease. We enrolled 335 consecutive valvular heart disease subjects who underwent echocardiography at our institution and an external accredited or nonaccredited institution within 6 months. Completeness and quality of echocardiographic reports and images were assessed by investigators blinded to the external laboratory accreditation status and echocardiographic results. Compared with nonaccredited laboratories, accredited sites more frequently reported patient sex (94% versus 78%; P <0.001), height and weight (96% versus 63%; P <0.001), blood pressure (86% versus 39%; P <0.001), left ventricular size (96% versus 83%; P <0.001), right ventricular size (94% versus 80%; P =0.001), and right ventricular function (87% versus 73%; P =0.006). Accredited laboratories had higher rates of complete and diagnostic color (58% versus 35%; P =0.002) and spectral Doppler imaging (45% versus 21%; P <0.0001). Concordance between external and internal grading of external studies was improved when diagnostic quantification was performed (85% versus 69%; P =0.003), and in patients with mitral regurgitation, reproducibility was improved with higher quality color Doppler imaging. Accredited echocardiographic laboratories had more complete reporting and better image quality, while echocardiographic quantification and color Doppler image quality were associated with improved concordance in grading valvular heart disease. Future quality improvement initiatives should highlight the importance of high-quality color Doppler imaging and echocardiographic quantification to improve the accuracy, reproducibility, and quality of echocardiographic studies for valvular heart disease. © 2017 American Heart Association, Inc.
Clinical microbiology informatics.
Rhoads, Daniel D; Sintchenko, Vitali; Rauch, Carol A; Pantanowitz, Liron
2014-10-01
The clinical microbiology laboratory has responsibilities ranging from characterizing the causative agent in a patient's infection to helping detect global disease outbreaks. All of these processes are increasingly becoming partnered more intimately with informatics. Effective application of informatics tools can increase the accuracy, timeliness, and completeness of microbiology testing while decreasing the laboratory workload, which can lead to optimized laboratory workflow and decreased costs. Informatics is poised to be increasingly relevant in clinical microbiology, with the advent of total laboratory automation, complex instrument interfaces, electronic health records, clinical decision support tools, and the clinical implementation of microbial genome sequencing. This review discusses the diverse informatics aspects that are relevant to the clinical microbiology laboratory, including the following: the microbiology laboratory information system, decision support tools, expert systems, instrument interfaces, total laboratory automation, telemicrobiology, automated image analysis, nucleic acid sequence databases, electronic reporting of infectious agents to public health agencies, and disease outbreak surveillance. The breadth and utility of informatics tools used in clinical microbiology have made them indispensable to contemporary clinical and laboratory practice. Continued advances in technology and development of these informatics tools will further improve patient and public health care in the future. Copyright © 2014, American Society for Microbiology. All Rights Reserved.
Clinical Microbiology Informatics
Sintchenko, Vitali; Rauch, Carol A.; Pantanowitz, Liron
2014-01-01
SUMMARY The clinical microbiology laboratory has responsibilities ranging from characterizing the causative agent in a patient's infection to helping detect global disease outbreaks. All of these processes are increasingly becoming partnered more intimately with informatics. Effective application of informatics tools can increase the accuracy, timeliness, and completeness of microbiology testing while decreasing the laboratory workload, which can lead to optimized laboratory workflow and decreased costs. Informatics is poised to be increasingly relevant in clinical microbiology, with the advent of total laboratory automation, complex instrument interfaces, electronic health records, clinical decision support tools, and the clinical implementation of microbial genome sequencing. This review discusses the diverse informatics aspects that are relevant to the clinical microbiology laboratory, including the following: the microbiology laboratory information system, decision support tools, expert systems, instrument interfaces, total laboratory automation, telemicrobiology, automated image analysis, nucleic acid sequence databases, electronic reporting of infectious agents to public health agencies, and disease outbreak surveillance. The breadth and utility of informatics tools used in clinical microbiology have made them indispensable to contemporary clinical and laboratory practice. Continued advances in technology and development of these informatics tools will further improve patient and public health care in the future. PMID:25278581
Atmospheric Science Data Center
2013-04-19
... View Larger Image This natural-color image of Anatahan Island from the Multi-angle ... (Acro Service Corporation/Jet Propulsion Laboratory), David J. Diner (Jet Propulsion Laboratory). Other formats available at JPL ...
U.S. Army Research Laboratory Image Enhancement Test Bed User’s Manual
2013-07-01
Web Services; ARL-TR- 6393; U.S. Army Research Laboratory: Adelphi, MD, March 2013. 2. Young, S. Susan; Driggers, Ronald G. Superresolution Image...Young, S. Susan; Theilke, Matthew.; Schuler, Jonathan M. Superresolution Performance for Undersampled Imagers. Optical Engineering 2005, 44 (01). 4
LIBRA is a fully-automatic breast density estimation software solution based on a published algorithm that works on either raw (i.e., “FOR PROCESSING”) or vendor post-processed (i.e., “FOR PRESENTATION”) digital mammography images. LIBRA has been applied to over 30,000 screening exams and is being increasingly utilized in larger studies.
Contingency diagrams as teaching tools
Mattaini, Mark A.
1995-01-01
Contingency diagrams are particularly effective teaching tools, because they provide a means for students to view the complexities of contingency networks present in natural and laboratory settings while displaying the elementary processes that constitute those networks. This paper sketches recent developments in this visualization technology and illustrates approaches for using contingency diagrams in teaching. ImagesFigure 2Figure 3Figure 4 PMID:22478208
Modeling and Measuring Charge-Sharing in Hard X-ray Imagers Using HEXITEC CdTe Detectors
NASA Technical Reports Server (NTRS)
Ryan, Daniel F.; Christe, Steven D.; Shih, Albert Y.; Baumgartner, Wayne H.; Wilson, Matthew D.; Seller, Paul; Gaskin, Jessica A.; Inglis, Andrew
2017-01-01
The Rutherford Appleton Laboratory's HEXITEC ASIC has been designed to provide fine pixelated X-ray spectroscopic imaging in combination with a CdTe or CZT detector layer. Although HEXITEC's small pixels enable higher spatial resolution as well as higher spectral resolution via the small-pixel effect, they also increase the probability of charge sharing, a process which degrades spectral performance by dividing the charge induced by a single photon among multiple pixels. In this paper, we investigate the effect of this process on a continuum X-ray spectrum below the Cd and Te fluorescence energies (23 keV). This is done by comparing laboratory measurements with simulations performed with a custom designed model of the HEXITEC ASIC. We find that the simulations closely match the observations implying that we have an adequate understanding of both charge sharing and the HEXITEC ASIC itself. These results can be used to predict the distortion of a spectrum measured with HEXITEC and will help determine to what extent it can be corrected. They also show that models like this one are important tools in developing and interpreting observations from ASICs like HEXITEC.
PDS Archive Release of Apollo 11, Apollo 12, and Apollo 17 Lunar Rock Sample Images
NASA Technical Reports Server (NTRS)
Garcia, P. A.; Stefanov, W. L.; Lofgren, G. E.; Todd, N. S.; Gaddis, L. R.
2013-01-01
Scientists at the Johnson Space Center (JSC) Lunar Sample Laboratory, Information Resources Directorate, and Image Science & Analysis Laboratory have been working to digitize (scan) the original film negatives of Apollo Lunar Rock Sample photographs [1, 2]. The rock samples, and associated regolith and lunar core samples, were obtained during the Apollo 11, 12, 14, 15, 16 and 17 missions. The images allow scientists to view the individual rock samples in their original or subdivided state prior to requesting physical samples for their research. In cases where access to the actual physical samples is not practical, the images provide an alternate mechanism for study of the subject samples. As the negatives are being scanned, they have been formatted and documented for permanent archive in the NASA Planetary Data System (PDS). The Astromaterials Research and Exploration Science Directorate (which includes the Lunar Sample Laboratory and Image Science & Analysis Laboratory) at JSC is working collaboratively with the Imaging Node of the PDS on the archiving of these valuable data. The PDS Imaging Node is now pleased to announce the release of the image archives for Apollo missions 11, 12, and 17.
NASA Astrophysics Data System (ADS)
Aghaei, A.
2017-12-01
Digital imaging and modeling of rocks and subsequent simulation of physical phenomena in digitally-constructed rock models are becoming an integral part of core analysis workflows. One of the inherent limitations of image-based analysis, at any given scale, is image resolution. This limitation becomes more evident when the rock has multiple scales of porosity such as in carbonates and tight sandstones. Multi-scale imaging and constructions of hybrid models that encompass images acquired at multiple scales and resolutions are proposed as a solution to this problem. In this study, we investigate the effect of image resolution and unresolved porosity on petrophysical and two-phase flow properties calculated based on images. A helical X-ray micro-CT scanner with a high cone-angle is used to acquire digital rock images that are free of geometric distortion. To remove subjectivity from the analyses, a semi-automated image processing technique is used to process and segment the acquired data into multiple phases. Direct and pore network based models are used to simulate physical phenomena and obtain absolute permeability, formation factor and two-phase flow properties such as relative permeability and capillary pressure. The effect of image resolution on each property is investigated. Finally a hybrid network model incorporating images at multiple resolutions is built and used for simulations. The results from the hybrid model are compared against results from the model built at the highest resolution and those from laboratory tests.
Use of CHROMagar Candida for genital specimens in the diagnostic laboratory.
Houang, E T; Chu, K C; Koehler, A P; Cheng, A F
1997-01-01
OBJECTIVE: To evaluate CHROMagar Candida (CA), a new yeast differential medium, for yeast isolation in a clinical laboratory for the routine examination of high vaginal swabs. METHODS: Results of high vaginal swab cultures processed in a standard manner on plates containing equal halves of Sabouraud dextrose agar (SDA) and CA were compared. Non-Candida albicans yeast isolates were further speciated with API 20C AUX or API 32C. To assess the ease of use of CA, laboratory staff lacking in experience of the medium were asked to identify 23 unlabelled yeast cultures on CA by referring to six labelled reference plates. RESULTS: Of the 1784 swab cultures processed, yeasts were isolated from 373 SDA and 368 CA. Of the 78 non-albicans isolates further speciated, CA identified correctly all cultures of C krusei and C tropicalis, and 82% of C glabrata. All the 38 inexperienced laboratory staff achieved 100% accuracy for C albicans and over 90% for C krusei and C tropicalis. CONCLUSIONS: CA is a satisfactory isolation medium for genital specimens, allowing immediate and correct identification of the commonly encountered yeasts and easy recognition of mixed cultures. Images PMID:9306935
NASA Astrophysics Data System (ADS)
Lemaitre, P.; Brunel, M.; Rondeau, A.; Porcheron, E.; Gréhan, G.
2015-12-01
According to changes in aircraft certifications rules, instrumentation has to be developed to alert the flight crews of potential icing conditions. The technique developed needs to measure in real time the amount of ice and liquid water encountered by the plane. Interferometric imaging offers an interesting solution: It is currently used to measure the size of regular droplets, and it can further measure the size of irregular particles from the analysis of their speckle-like out-of-focus images. However, conventional image processing needs to be speeded up to be compatible with the real-time detection of icing conditions. This article presents the development of an optimised algorithm to accelerate image processing. The algorithm proposed is based on the detection of each interferogram with the use of the gradient pair vector method. This method is shown to be 13 times faster than the conventional Hough transform. The algorithm is validated on synthetic images of mixed phase clouds, and finally tested and validated in laboratory conditions. This algorithm should have important applications in the size measurement of droplets and ice particles for aircraft safety, cloud microphysics investigation, and more generally in the real-time analysis of triphasic flows using interferometric particle imaging.
NASA Astrophysics Data System (ADS)
Spina, L.; Colucci, S.; De'Michieli Vitturi, M.; Scheu, B.; Dingwell, D. B.
2014-12-01
Numerical modeling, joined with experimental investigations, is fundamental for studying the dynamics of magmatic fluid into the conduit, where direct observations are unattainable. Furthermore, laboratory experiments can provide invaluable data to vunalidate complex multiphase codes. With the aim on unveil the essence of nucleation process, as well as the behavior of the multiphase magmatic fluid, we performed slow decompression experiments in a shock tube system. We choose silicon oil as analogue for the magmatic melt, and saturated it with Argon at 10 MPa for 72h. The slow decompression to atmospheric conditions was monitored through a high speed camera and pressure sensors, located into the experimental conduit. The experimental conditions of the decompression process have then been reproduced numerically with a compressible multiphase solver based on OpenFOAM. Numerical simulations have been performed by the OpenFOAM compressibleInterFoam solver for 2 compressible, non-isothermal immiscible fluids, using a VOF (volume of fluid) phase-fraction based interface capturing approach. The data extracted from 2D images obtained from laboratory analyses were compared to the outcome of numerical investigation, showing the capability of the model to capture the main processes studied.
Sudden death in Lesch-Nyhan disease.
Neychev, Vladimir Kostadinov; Jinnah, H A
2006-11-01
To increase awareness of sudden and unexpected death in Lesch-Nyhan disease (LND) and to explore its potential causes, we report the anteceding clinical features and laboratory evaluations of five males with LND who ultimately experienced sudden and unexpected death, along with three additional males who suffered serious respiratory events during life. The ages of patients ranged from 2 to 45 years. The cause of sudden death in LND appears to have a respiratory rather than a cardiogenic basis. All cases cannot be linked readily with a single respiratory process. Instead, different respiratory processes appear to operate in different cases. These may include aspiration, laryngospasm, central apnea, cyanotic breath-holding spells, and high cervical spine damage. Better recognition of these processes will help to guide appropriate workup and management that could include chest imaging, endoscopy of the airways, polysomnography, electroencephalogram, and brain and/or spine imaging.
A modeling analysis program for the JPL table mountain Io sodium cloud
NASA Technical Reports Server (NTRS)
Smyth, W. H.; Goldberg, B. A.
1985-01-01
Progress and achievements in the first year are discussed in three main areas: (1) review and assessment of the massive JPL Table Mountain Io sodium cloud data set, (2) formulation and execution of a plan to perform further processing of this data set, and (3) initiation of modeling activities. The complete 1976-79 and 1981 data sets are reviewed. Particular emphasis is placed on the superior 1981 Region B/C images which provide a rich base of information for studying the structure and escape of gases from Io as well as possible east-west and magnetic longitudinal asymmetries in the plasma torus. A data processing plan is developed and is undertaken by the Multimission Image Processing Laboratory of JPL for the purpose of providing a more refined and complete data set for our modeling studies in the second year. Modeling priorities are formulated and initial progress in achieving these goals is reported.
A low cost mobile phone dark-field microscope for nanoparticle-based quantitative studies.
Sun, Dali; Hu, Tony Y
2018-01-15
Dark-field microscope (DFM) analysis of nanoparticle binding signal is highly useful for a variety of research and biomedical applications, but current applications for nanoparticle quantification rely on expensive DFM systems. The cost, size, limited robustness of these DFMs limits their utility for non-laboratory settings. Most nanoparticle analyses use high-magnification DFM images, which are labor intensive to acquire and subject to operator bias. Low-magnification DFM image capture is faster, but is subject to background from surface artifacts and debris, although image processing can partially compensate for background signal. We thus mated an LED light source, a dark-field condenser and a 20× objective lens with a mobile phone camera to create an inexpensive, portable and robust DFM system suitable for use in non-laboratory conditions. This proof-of-concept mobile DFM device weighs less than 400g and costs less than $2000, but analysis of images captured with this device reveal similar nanoparticle quantitation results to those acquired with a much larger and more expensive desktop DFMM system. Our results suggest that similar devices may be useful for quantification of stable, nanoparticle-based activity and quantitation assays in resource-limited areas where conventional assay approaches are not practical. Copyright © 2017 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Xie, Fan; Ren, Yaqiong; Zhou, Yongsheng; Larose, Eric; Baillet, Laurent
2018-03-01
Diffuse acoustic or seismic waves are highly sensitive to detect changes of mechanical properties in heterogeneous geological materials. In particular, thanks to acoustoelasticity, we can quantify stress changes by tracking acoustic or seismic relative velocity changes in the material at test. In this paper, we report on a small-scale laboratory application of an innovative time-lapse tomography technique named Locadiff to image spatiotemporal mechanical changes on a granite sample under biaxial loading, using diffuse waves at ultrasonic frequencies (300 kHz to 900 kHz). We demonstrate the ability of the method to image reversible stress evolution and deformation process, together with the development of reversible and irreversible localized microdamage in the specimen at an early stage. Using full-field infrared thermography, we visualize stress-induced temperature changes and validate stress images obtained from diffuse ultrasound. We demonstrate that the inversion with a good resolution can be achieved with only a limited number of receivers distributed around a single source, all located at the free surface of the specimen. This small-scale experiment is a proof of concept for frictional earthquake-like failure (e.g., stick-slip) research at laboratory scale as well as large-scale seismic applications, potentially including active fault monitoring.
Radiometric performance of the Voyager cameras
NASA Technical Reports Server (NTRS)
Danielson, G. E.; Kupferman, P. N.; Johnson, T. V.; Soderblom, L. A.
1981-01-01
The Voyager Imaging Experiment provided high-quality data of Jupiter and the Galilean satellites with the two flyby trajectories in March and July of 1979. Moderately accurate radiometric measurements have been made using these data. This paper evaluates the radiometric results and describes the inflight and ground geometric and radiometric correction factors. The radiometric quantities of intensity I and geometric albedo I/F are derived, and scaling factors for each of the filters are tabulated for correcting the 'calibrated' data from the Image Processing Laboratory at JPL. In addition, the key characteristics of both Voyager I and Voyager 2 cameras are tabulated.
Forest Resource Information System. Phase 3: System transfer report
NASA Technical Reports Server (NTRS)
Mroczynski, R. P. (Principal Investigator)
1981-01-01
Transfer of the forest reserve information system (FRIS) from the Laboratory for Applications of Remote Sensing to St. Regis Paper Company is described. Modifications required for the transfer of the LARYS image processing software are discussed. The reformatting, geometric correction, image registration, and documentation performed for preprocessing transfer are described. Data turnaround was improved and geometrically corrected and ground-registered CCT LANDSAT 3 data provided to the user. The technology transfer activities are summarized. An application test performed in order to assess a Florida land acquisition is described. A benefit/cost analysis of FRIS is presented.
Diffraction Contrast Tomography: A Novel 3D Polycrystalline Grain Imaging Technique
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kuettner, Lindsey Ann
2017-06-06
Diffraction contrast tomography (DCT) is a non-destructive way of imaging microstructures of polycrystalline materials such as metals or crystalline organics. It is a useful technique to map 3D grain structures as well as providing crystallographic information such as crystal orientation, grain shape, and strain. Understanding the internal microstructure of a material is important in understanding the bulk material properties. This report gives a general overview of the similar techniques, DCT data acquisition, and analysis processes. Following the short literature review, potential work and research at Los Alamos National Laboratory (LANL) is discussed.
NASA Technical Reports Server (NTRS)
Kruse, Fred A.
1990-01-01
The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), flown aboard the NASA ER-2 aircraft in 1987 and 1989, used four linear arrays and four individual spectrometers to collect data simultaneously from the 224 bands in a scanned 614 pixel-wide swath perpendicular to the aircraft direction. The research had two goals. One was to evaluate the AVIRIS data. The other was to look at the subtle lithological variation at the two test sites to develop a better understanding of the regional geology and surficial processes. The geometric characteristics of the data, adequacy of the spatial resolution, and adequacy of the spectral sampling interval are evaluated. Geologic differences at the test sites were mapped. They included lithological variation caused by primary sedimentary layering, facies variation, and weathering; and subtle mineralogical differences caused by hydrothermal alterations of igneous and sedimentary rocks. The investigation used laboratory, field, and aircraft spectral measurements; known properties of geological materials; digital image processing and spectrum processing techniques; and field geologic data to evaluate the selected characteristics of the AVIRIS data.
Transport and installation of the Dark Energy Survey CCD imager
NASA Astrophysics Data System (ADS)
Derylo, Greg; Chi, Edward; Diehl, H. Thomas; Estrada, Juan; Flaugher, Brenna; Schultz, Ken
2012-09-01
The Dark Energy Survey CCD imager was constructed at the Fermi National Accelerator Laboratory and delivered to the Cerro Tololo Inter-American Observatory in Chile for installation onto the Blanco 4m telescope. Several efforts are described relating to preparation of the instrument for transport, development and testing of a shipping crate designed to minimize transportation loads transmitted to the camera, and inspection of the imager upon arrival at the observatory. Transportation loads were monitored and are described. For installation of the imager at the telescope prime focus, where it mates with its previously-installed optical corrector, specialized tooling was developed to safely lift, support, and position the vessel. The installation and removal processes were tested on the Telescope Simulator mockup at FNAL, thus minimizing technical and schedule risk for the work performed at CTIO. Final installation of the imager is scheduled for August 2012.
NASA Technical Reports Server (NTRS)
2000-01-01
This movie shows the portion of Jupiter around the Great Red Spot as it swirls through more than 60 Jupiter days. Notice the difference in speed and direction of the various zones of the atmosphere. The interaction of the atmospheric clouds and storm shows how dynamic the Jovian atmosphere is.
As Voyager 1 approached Jupiter in 1979, it took images of the planet at regular intervals. This sequence is made from 66 images taken once every Jupiter rotation period (about 10 hours). This time-lapse movie uses images taken every time Jupiter longitude 68W passed under the spacecraft. These images were acquired in the Blue filter from Jan. 6 to Feb. 3 1979. The spacecraft flew from 58 million kilometers to 31 million kilometers from Jupiter during that time.This time-lapse movie was produced at JPL by the Image Processing Laboratory in 1979.Advances in Small Animal Imaging Systems
NASA Astrophysics Data System (ADS)
Loudos, George K.
2007-11-01
The rapid growth in genetics and molecular biology combined with the development of techniques for genetically engineering small animals has led to an increased interest in in vivo laboratory animal imaging during the past few years. For this purpose, new instrumentation, data acquisition strategies, and image processing and reconstruction techniques are being developed, researched and evaluated. The aim of this article is to give a short overview of the state of the art technologies for high resolution and high sensitivity molecular imaging techniques, primarily positron emission tomography (PET) and single photon emission computed tomography (SPECT). The basic needs of small animal imaging will be described. The evolution in instrumentation in the past two decades, as well as the commercially available systems will be overviewed. Finally, the new trends in detector technology and preliminary results from challenging applications will be presented. For more details a number of references are provided.
Introducing PLIA: Planetary Laboratory for Image Analysis
NASA Astrophysics Data System (ADS)
Peralta, J.; Hueso, R.; Barrado, N.; Sánchez-Lavega, A.
2005-08-01
We present a graphical software tool developed under IDL software to navigate, process and analyze planetary images. The software has a complete Graphical User Interface and is cross-platform. It can also run under the IDL Virtual Machine without the need to own an IDL license. The set of tools included allow image navigation (orientation, centring and automatic limb determination), dynamical and photometric atmospheric measurements (winds and cloud albedos), cylindrical and polar projections, as well as image treatment under several procedures. Being written in IDL, it is modular and easy to modify and grow for adding new capabilities. We show several examples of the software capabilities with Galileo-Venus observations: Image navigation, photometrical corrections, wind profiles obtained by cloud tracking, cylindrical projections and cloud photometric measurements. Acknowledgements: This work has been funded by Spanish MCYT PNAYA2003-03216, fondos FEDER and Grupos UPV 15946/2004. R. Hueso acknowledges a post-doc fellowship from Gobierno Vasco.
NASA Astrophysics Data System (ADS)
Gatlin, Todd Adam
Graduate teaching assistants (GTAs) play a prominent role in chemistry laboratory instruction at research based universities. They teach almost all undergraduate chemistry laboratory courses. However, their role in laboratory instruction has often been overlooked in educational research. Interest in chemistry GTAs has been placed on training and their perceived expectations, but less attention has been paid to their experiences or their potential benefits from teaching. This work was designed to investigate GTAs' experiences in and benefits from laboratory instructional environments. This dissertation includes three related studies on GTAs' experiences teaching in general chemistry laboratories. Qualitative methods were used for each study. First, phenomenological analysis was used to explore GTAs' experiences in an expository laboratory program. Post-teaching interviews were the primary data source. GTAs experiences were described in three dimensions: doing, knowing, and transferring. Gains available to GTAs revolved around general teaching skills. However, no gains specifically related to scientific development were found in this laboratory format. Case-study methods were used to explore and illustrate ways GTAs develop a GTA self-image---the way they see themselves as instructors. Two general chemistry laboratory programs that represent two very different instructional frameworks were chosen for the context of this study. The first program used a cooperative project-based approach. The second program used weekly, verification-type activities. End of the semester interviews were collected and served as the primary data source. A follow-up case study of a new cohort of GTAs in the cooperative problem-based laboratory was undertaken to investigate changes in GTAs' self-images over the course of one semester. Pre-semester and post-semester interviews served as the primary data source. Findings suggest that GTAs' construction of their self-image is shaped through the interaction of 1) prior experiences, 2) training, 3) beliefs about the nature of knowledge, 4) beliefs about the nature of laboratory work, and 5) involvement in the laboratory setting. Further GTAs' self-images are malleable and susceptible to change through their laboratory teaching experiences. Overall, this dissertation contributes to chemistry education by providing a model useful for exploring GTAs' development of a self-image in laboratory teaching. This work may assist laboratory instructors and coordinators in reconsidering, when applicable, GTA training and support. This work also holds considerable implications for how teaching experiences are conceptualized as part of the chemistry graduate education experience. Findings suggest that appropriate teaching experiences may contribute towards better preparing graduate students for their journey in becoming scientists.
Image classification of human carcinoma cells using complex wavelet-based covariance descriptors.
Keskin, Furkan; Suhre, Alexander; Kose, Kivanc; Ersahin, Tulin; Cetin, A Enis; Cetin-Atalay, Rengul
2013-01-01
Cancer cell lines are widely used for research purposes in laboratories all over the world. Computer-assisted classification of cancer cells can alleviate the burden of manual labeling and help cancer research. In this paper, we present a novel computerized method for cancer cell line image classification. The aim is to automatically classify 14 different classes of cell lines including 7 classes of breast and 7 classes of liver cancer cells. Microscopic images containing irregular carcinoma cell patterns are represented by subwindows which correspond to foreground pixels. For each subwindow, a covariance descriptor utilizing the dual-tree complex wavelet transform (DT-[Formula: see text]WT) coefficients and several morphological attributes are computed. Directionally selective DT-[Formula: see text]WT feature parameters are preferred primarily because of their ability to characterize edges at multiple orientations which is the characteristic feature of carcinoma cell line images. A Support Vector Machine (SVM) classifier with radial basis function (RBF) kernel is employed for final classification. Over a dataset of 840 images, we achieve an accuracy above 98%, which outperforms the classical covariance-based methods. The proposed system can be used as a reliable decision maker for laboratory studies. Our tool provides an automated, time- and cost-efficient analysis of cancer cell morphology to classify different cancer cell lines using image-processing techniques, which can be used as an alternative to the costly short tandem repeat (STR) analysis. The data set used in this manuscript is available as supplementary material through http://signal.ee.bilkent.edu.tr/cancerCellLineClassificationSampleImages.html.
Image Classification of Human Carcinoma Cells Using Complex Wavelet-Based Covariance Descriptors
Keskin, Furkan; Suhre, Alexander; Kose, Kivanc; Ersahin, Tulin; Cetin, A. Enis; Cetin-Atalay, Rengul
2013-01-01
Cancer cell lines are widely used for research purposes in laboratories all over the world. Computer-assisted classification of cancer cells can alleviate the burden of manual labeling and help cancer research. In this paper, we present a novel computerized method for cancer cell line image classification. The aim is to automatically classify 14 different classes of cell lines including 7 classes of breast and 7 classes of liver cancer cells. Microscopic images containing irregular carcinoma cell patterns are represented by subwindows which correspond to foreground pixels. For each subwindow, a covariance descriptor utilizing the dual-tree complex wavelet transform (DT-WT) coefficients and several morphological attributes are computed. Directionally selective DT-WT feature parameters are preferred primarily because of their ability to characterize edges at multiple orientations which is the characteristic feature of carcinoma cell line images. A Support Vector Machine (SVM) classifier with radial basis function (RBF) kernel is employed for final classification. Over a dataset of 840 images, we achieve an accuracy above 98%, which outperforms the classical covariance-based methods. The proposed system can be used as a reliable decision maker for laboratory studies. Our tool provides an automated, time- and cost-efficient analysis of cancer cell morphology to classify different cancer cell lines using image-processing techniques, which can be used as an alternative to the costly short tandem repeat (STR) analysis. The data set used in this manuscript is available as supplementary material through http://signal.ee.bilkent.edu.tr/cancerCellLineClassificationSampleImages.html. PMID:23341908
Zarella, Mark D; Breen, David E; Plagov, Andrei; Garcia, Fernando U
2015-01-01
Hematoxylin and eosin (H&E) staining is ubiquitous in pathology practice and research. As digital pathology has evolved, the reliance of quantitative methods that make use of H&E images has similarly expanded. For example, cell counting and nuclear morphometry rely on the accurate demarcation of nuclei from other structures and each other. One of the major obstacles to quantitative analysis of H&E images is the high degree of variability observed between different samples and different laboratories. In an effort to characterize this variability, as well as to provide a substrate that can potentially mitigate this factor in quantitative image analysis, we developed a technique to project H&E images into an optimized space more appropriate for many image analysis procedures. We used a decision tree-based support vector machine learning algorithm to classify 44 H&E stained whole slide images of resected breast tumors according to the histological structures that are present. This procedure takes an H&E image as an input and produces a classification map of the image that predicts the likelihood of a pixel belonging to any one of a set of user-defined structures (e.g., cytoplasm, stroma). By reducing these maps into their constituent pixels in color space, an optimal reference vector is obtained for each structure, which identifies the color attributes that maximally distinguish one structure from other elements in the image. We show that tissue structures can be identified using this semi-automated technique. By comparing structure centroids across different images, we obtained a quantitative depiction of H&E variability for each structure. This measurement can potentially be utilized in the laboratory to help calibrate daily staining or identify troublesome slides. Moreover, by aligning reference vectors derived from this technique, images can be transformed in a way that standardizes their color properties and makes them more amenable to image processing.
2018-01-01
Background Structural and functional brain images are essential imaging modalities for medical experts to study brain anatomy. These images are typically visually inspected by experts. To analyze images without any bias, they must be first converted to numeric values. Many software packages are available to process the images, but they are complex and difficult to use. The software packages are also hardware intensive. The results obtained after processing vary depending on the native operating system used and its associated software libraries; data processed in one system cannot typically be combined with data on another system. Objective The aim of this study was to fulfill the neuroimaging community’s need for a common platform to store, process, explore, and visualize their neuroimaging data and results using Neuroimaging Web Services Interface: a series of processing pipelines designed as a cyber physical system for neuroimaging and clinical data in brain research. Methods Neuroimaging Web Services Interface accepts magnetic resonance imaging, positron emission tomography, diffusion tensor imaging, and functional magnetic resonance imaging. These images are processed using existing and custom software packages. The output is then stored as image files, tabulated files, and MySQL tables. The system, made up of a series of interconnected servers, is password-protected and is securely accessible through a Web interface and allows (1) visualization of results and (2) downloading of tabulated data. Results All results were obtained using our processing servers in order to maintain data validity and consistency. The design is responsive and scalable. The processing pipeline started from a FreeSurfer reconstruction of Structural magnetic resonance imaging images. The FreeSurfer and regional standardized uptake value ratio calculations were validated using Alzheimer’s Disease Neuroimaging Initiative input images, and the results were posted at the Laboratory of Neuro Imaging data archive. Notable leading researchers in the field of Alzheimer’s Disease and epilepsy have used the interface to access and process the data and visualize the results. Tabulated results with unique visualization mechanisms help guide more informed diagnosis and expert rating, providing a truly unique multimodal imaging platform that combines magnetic resonance imaging, positron emission tomography, diffusion tensor imaging, and resting state functional magnetic resonance imaging. A quality control component was reinforced through expert visual rating involving at least 2 experts. Conclusions To our knowledge, there is no validated Web-based system offering all the services that Neuroimaging Web Services Interface offers. The intent of Neuroimaging Web Services Interface is to create a tool for clinicians and researchers with keen interest on multimodal neuroimaging. More importantly, Neuroimaging Web Services Interface significantly augments the Alzheimer’s Disease Neuroimaging Initiative data, especially since our data contain a large cohort of Hispanic normal controls and Alzheimer’s Disease patients. The obtained results could be scrutinized visually or through the tabulated forms, informing researchers on subtle changes that characterize the different stages of the disease. PMID:29699962
Mars Science Laboratory Rover and Descent Stage
2008-11-19
In this February 17, 2009, image, NASA Mars Science Laboratory rover is attached to the spacecraft descent stage. The image was taken inside the Spacecraft Assembly Facility at NASA JPL, Pasadena, Calif.
NASA Astrophysics Data System (ADS)
Termini, Donatella; Di Leonardo, Alice
2016-04-01
High flow conditions, which are generally characterized by high sediment concentrations, do not permit the use of traditional measurement equipment. Traditional techniques usually are based on the intrusive measure of the vertical profile of flow velocity and on the linking of water depth with the discharge through the rating curve. The major disadvantage of these measurement techniques is that they are difficult to use and not safe for operators especially in high flow conditions. The point is that, as literature shows (see as an example Moramarco and Termini, 2015), especially in such conditions, the measurement of surface velocity distribution is important to evaluate the mean flow velocity and, thus, the flow discharge. In the last decade, image-based techniques have been increasingly used for surface velocity measurements (among others Joeau et al., 2008). Experimental program has been recently conducted at the Hydraulic laboratory of the Department of Civil, Environmental, Aerospatial and of Materials Engineering (DICAM) - University of Palermo (Italy) in order to analyze the propagation phenomenon of hyper-concentrated flow in a defense channel. The experimental apparatus includes a high-precision camera and a system allowing the images recording. This paper investigates the utility and the efficiency of the digital image-technique for remote monitoring of surface velocity in hyper-concentrated flow by the aid of data collected during experiments conducted in the laboratory flume. In particular the present paper attention is focused on the estimation procedure of the velocity vectors and on their sensitivity with parameters (number of images, spatial resolution of interrogation area,) of the images processing procedure. References Jodeau M., A. Hauet, A. Paquier, Le Coz J., Dramais G., Application and evaluation of LS-PIV technique for the monitoring of river surface in high flow conditions, Flow Measurements and Instrumentation, Vol.19, No.2, 2008, pp.117-127. Moramarco T., Termini D., Entropic approach to estimate the mean flow velocity: experimental investigation in laboratory flumes, Environmental Fluid mechanics, Vol. 15, No.1, 2015.
Membrane-targeting liquid crystal nanoparticles (LCNPs) for drug delivery
NASA Astrophysics Data System (ADS)
Nag, Okhil K.; Naciri, Jawad; Spillmann, Christopher M.; Delehanty, James B.
2016-03-01
In addition to maintaining the structural integrity of the cell, the plasma membrane regulates multiple important cellular processes, such as endocytosis and trafficking, apoptotic pathways and drug transport. The modulation or tracking of such cellular processes by means of controlled delivery of drugs or imaging agents via nanoscale delivery systems is very attractive. Nanoparticle-mediated delivery systems that mediate long-term residence (e.g., days) and controlled release of the cargoes in the plasma membrane while simultaneously not interfering with regular cellular physiology would be ideal for this purpose. Our laboratory has developed a plasma membrane-targeted liquid crystal nanoparticle (LCNP) formulation that can be loaded with dyes or drugs which can be slowly released from the particle over time. Here we highlight the utility of these nanopreparations for membrane delivery and imaging.
NASA Technical Reports Server (NTRS)
2001-01-01
DATASTAR, Inc., of Picayune, Miss., has taken NASA's award-winning Earth Resources Laboratory Applications (ELAS) software program and evolved it to the point that the company is now providing a unique, spatial imagery service over the Internet. ELAS was developed in the early 80's to process satellite and airborne sensor imagery data of the Earth's surface into readable and useable information. While there are several software packages on the market that allow the manipulation of spatial data into useable products, this is usually a laborious task. The new program, called the DATASTAR Image Processing Exploitation, or DIPX, Delivery Service, is a subscription service available over the Internet that takes the work out of the equation and provides normalized geo-spatial data in the form of decision products.
NASA Technical Reports Server (NTRS)
1992-01-01
This mosaic picture of the Moon was compiled from 18 images taken with a green filter by Galileo's imaging system during the spacecraft's flyby on December 7, 1992, some 11 hours before its Earth flyby at 1509 UTC (7:09 a.m. Pacific Standard Time) December 8. The north polar region is near the top part of the mosaic, which also shows Mare Imbrium, the dark area on the left; Mare Serenitatis at center; and Mare Crisium, the circular dark area to the right. Bright crater rim and ray deposits are from Copernicus, an impact crater 96 kilometers (60 miles) in diameter. Computer processing has exaggerated the brightness of poorly illuminated features near the day/night terminator in the polar regions, giving a false impression of high reflectivity there. The digital image processing was done by DLR the German aerospace research establishment near Munich, an international collaborator in the Galileo mission. The Galileo project, whose primary mission is the exploration of the Jupiter system in 1995-97, is managed for NASA's Office of Space Science and Applications by the Jet Propulsion Laboratory.
CT Scans of Soil Specimen Processed in Space
NASA Technical Reports Server (NTRS)
1998-01-01
CT scans of the spcimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. This view is made from a series of horizontal slices. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. Credit: Los Alamos National Laboratory and the University of Colorado at Boulder.
CT Scans of Soil Specimen Processed in Space
NASA Technical Reports Server (NTRS)
1998-01-01
CT scans of the specimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. This view is made from three orthogonal slices. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. (Credit: Los Alamos National Laboratory and the University of Colorado at Boulder).
CT Scans of Soil Specimen Processed in Space
NASA Technical Reports Server (NTRS)
1998-01-01
CT scans of the spcimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. This view depict horizontal slices from top to bottom of a flight specimen. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. Credit: Los Alamos National Laboratory and the University of Colorado at Boulder.
CT Scans of Soil Specimen Processed in Space
NASA Technical Reports Server (NTRS)
1998-01-01
CT scans of the spcimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. These views depict vertical slices from side to middle of a flight specimen. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. Credit: Los Alamos National Laboratory and the University of Colorado at Boulder.
Color Imaging management in film processing
NASA Astrophysics Data System (ADS)
Tremeau, Alain; Konik, Hubert; Colantoni, Philippe
2003-12-01
The latest research projects in the laboratory LIGIV concerns capture, processing, archiving and display of color images considering the trichromatic nature of the Human Vision System (HSV). Among these projects one addresses digital cinematographic film sequences of high resolution and dynamic range. This project aims to optimize the use of content for the post-production operators and for the end user. The studies presented in this paper address the use of metadata to optimise the consumption of video content on a device of user's choice independent of the nature of the equipment that captured the content. Optimising consumption includes enhancing the quality of image reconstruction on a display. Another part of this project addresses the content-based adaptation of image display. Main focus is on Regions of Interest (ROI) operations, based on the ROI concepts of MPEG-7. The aim of this second part is to characterize and ensure the conditions of display even if display device or display media changes. This requires firstly the definition of a reference color space and the definition of bi-directional color transformations for each peripheral device (camera, display, film recorder, etc.). The complicating factor is that different devices have different color gamuts, depending on the chromaticity of their primaries and the ambient illumination under which they are viewed. To match the displayed image to the aimed appearance, all kind of production metadata (camera specification, camera colour primaries, lighting conditions) should be associated to the film material. Metadata and content build together rich content. The author is assumed to specify conditions as known from digital graphics arts. To control image pre-processing and image post-processing, these specifications should be contained in the film's metadata. The specifications are related to the ICC profiles but need additionally consider mesopic viewing conditions.
Phoenix Wet Chemistry Laboratory Units
2008-06-26
This image shows four Wet Chemistry Laboratory units, part of the Microscopy, Electrochemistry, and Conductivity Analyzer MECA instrument on board NASA Phoenix Mars Lander. This image was taken before Phoenix launch on August 4, 2007.
BOREAS RSS-14 Level 1a GOES-7 Visible, IR, and Water Vapor Images
NASA Technical Reports Server (NTRS)
Hall, Forrest G. (Editor); Newcomer, Jeffrey A.; Faysash, David; Cooper, Harry J.; Smith, Eric A.
2000-01-01
The BOREAS RSS-14 team collected and processed GOES-7 and -8 images of the BOREAS region as part of its effort to characterize the incoming, reflected, and emitted radiation at regional scales. The level-1a BOREAS GOES-7 image data were collected by RSS-14 personnel at FSU and processed to level-1a products by BORIS personnel. The data cover the period of 01-Jan-1994 through 08-Jul-1995 with partial to complete coverage on the majority of the days. The data include three bands with eightbit pixel values. No major problems with the data have been identified. Due to the large size of the images, the level-1a GOES-7 data are not contained on the BOREAS CD-ROM set. An inventory listing file is supplied on the CD-ROM to inform users of what data were collected. The level-1a GOES-7 image data are available from the Earth Observing System Data and Information System (EOSDIS) Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC). See sections 15 and 16 for more information. The data files are available on a CD-ROM (see document number 20010000884).
Multitemporal Three Dimensional Imaging of Volcanic Products on the Macro- and Micro- Scale
NASA Astrophysics Data System (ADS)
Carter, A. J.; Ramsey, M. S.; Durant, A. J.; Skilling, I. P.
2006-12-01
Satellite data from the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) can be processed using a nadir- and backward-viewing band at the same wavelength to generate a Digital Elevation Model (DEM) at a maximum spatial resolution of 15 metres. Bezymianny Volcano (Kamchatka Peninsula, Russia) was chosen as a test target for multitemporal DEM generation. DEMs were used to generate a layer stack and calculate coarse topographic changes from 2000 to 2006, the most significant of which was a new crater that formed in spring 2005. The eruption that occurred on 11 January 2005 produced a pyroclastic deposit on the east flank, which was mapped and from which samples were collected in August 2005. A comparison was made between field-based observations of the deposit and micron-scale roughness (analogous to vesicularity) derived from ASTER thermal infrared data following the model described in Ramsey and Fink (1999) on lava domes. In order to investigate applying this technique to the pyroclastic deposits, 18 small samples from Bezymianny were selected for Scanning Electron Microscope (SEM) micron-scale analysis. The SEM image data were processed using software capable of calculating surface roughness and vesicle volume from stereo pairs: a statistical analysis of samples is presented using a high resolution grid of surface profiles. The results allow for a direct comparison to field, laboratory, and satellite-based estimates of micron-scale roughness. Prior to SEM processing, laboratory thermal emission spectra of the microsamples were collected and modelled to estimate vesicularity. Each data set was compared and assessed for coherence within the limitations of each technique. This study outlines the value of initially imaging at the macro-scale to assess major topographic changes over time at the volcano. This is followed by an example of the application of micro-scale SEM imaging and spectral deconvolution, highlighting the advantages of using multiple resolutions to analyse frequently overlapping products at Bezymianny.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Baumbach, S., E-mail: baumbach@rheinahrcampus.de; Wilhein, T.; Kanngießer, B.
2015-08-15
This article introduces a laboratory setup of a transmission full-field x-ray microscope at 8 keV photon energy. The microscope operates in bright and dark field imaging mode with a maximum field of view of 50 μm. Since the illumination geometry determines whether the sample is illuminated homogeneously and moreover, if different imaging methods can be applied, the condenser optic is one of the most significant parts. With a new type of x-ray condenser, a polycapillary optic, we realized bright field imaging and for the first time dark field imaging at 8 keV photon energy in a laboratory setup. A detectormore » limited spatial resolution of 210 nm is measured on x-ray images of Siemens star test patterns.« less
Baumbach, S; Kanngießer, B; Malzer, W; Stiel, H; Wilhein, T
2015-08-01
This article introduces a laboratory setup of a transmission full-field x-ray microscope at 8 keV photon energy. The microscope operates in bright and dark field imaging mode with a maximum field of view of 50 μm. Since the illumination geometry determines whether the sample is illuminated homogeneously and moreover, if different imaging methods can be applied, the condenser optic is one of the most significant parts. With a new type of x-ray condenser, a polycapillary optic, we realized bright field imaging and for the first time dark field imaging at 8 keV photon energy in a laboratory setup. A detector limited spatial resolution of 210 nm is measured on x-ray images of Siemens star test patterns.
Integrating Robotic Observatories into Astronomy Labs
NASA Astrophysics Data System (ADS)
Ruch, Gerald T.
2015-01-01
The University of St. Thomas (UST) and a consortium of five local schools is using the UST Robotic Observatory, housing a 17' telescope, to develop labs and image processing tools that allow easy integration of observational labs into existing introductory astronomy curriculum. Our lab design removes the burden of equipment ownership by sharing access to a common resource and removes the burden of data processing by automating processing tasks that are not relevant to the learning objectives.Each laboratory exercise takes place over two lab periods. During period one, students design and submit observation requests via the lab website. Between periods, the telescope automatically acquires the data and our image processing pipeline produces data ready for student analysis. During period two, the students retrieve their data from the website and perform the analysis. The first lab, 'Weighing Jupiter,' was successfully implemented at UST and several of our partner schools. We are currently developing a second lab to measure the age of and distance to a globular cluster.
Tracking and Quantifying Developmental Processes in C. elegans Using Open-source Tools.
Dutta, Priyanka; Lehmann, Christina; Odedra, Devang; Singh, Deepika; Pohl, Christian
2015-12-16
Quantitatively capturing developmental processes is crucial to derive mechanistic models and key to identify and describe mutant phenotypes. Here protocols are presented for preparing embryos and adult C. elegans animals for short- and long-term time-lapse microscopy and methods for tracking and quantification of developmental processes. The methods presented are all based on C. elegans strains available from the Caenorhabditis Genetics Center and on open-source software that can be easily implemented in any laboratory independently of the microscopy system used. A reconstruction of a 3D cell-shape model using the modelling software IMOD, manual tracking of fluorescently-labeled subcellular structures using the multi-purpose image analysis program Endrov, and an analysis of cortical contractile flow using PIVlab (Time-Resolved Digital Particle Image Velocimetry Tool for MATLAB) are shown. It is discussed how these methods can also be deployed to quantitatively capture other developmental processes in different models, e.g., cell tracking and lineage tracing, tracking of vesicle flow.
Cloud Engineering Principles and Technology Enablers for Medical Image Processing-as-a-Service
Bao, Shunxing; Plassard, Andrew J.; Landman, Bennett A.; Gokhale, Aniruddha
2017-01-01
Traditional in-house, laboratory-based medical imaging studies use hierarchical data structures (e.g., NFS file stores) or databases (e.g., COINS, XNAT) for storage and retrieval. The resulting performance from these approaches is, however, impeded by standard network switches since they can saturate network bandwidth during transfer from storage to processing nodes for even moderate-sized studies. To that end, a cloud-based “medical image processing-as-a-service” offers promise in utilizing the ecosystem of Apache Hadoop, which is a flexible framework providing distributed, scalable, fault tolerant storage and parallel computational modules, and HBase, which is a NoSQL database built atop Hadoop’s distributed file system. Despite this promise, HBase’s load distribution strategy of region split and merge is detrimental to the hierarchical organization of imaging data (e.g., project, subject, session, scan, slice). This paper makes two contributions to address these concerns by describing key cloud engineering principles and technology enhancements we made to the Apache Hadoop ecosystem for medical imaging applications. First, we propose a row-key design for HBase, which is a necessary step that is driven by the hierarchical organization of imaging data. Second, we propose a novel data allocation policy within HBase to strongly enforce collocation of hierarchically related imaging data. The proposed enhancements accelerate data processing by minimizing network usage and localizing processing to machines where the data already exist. Moreover, our approach is amenable to the traditional scan, subject, and project-level analysis procedures, and is compatible with standard command line/scriptable image processing software. Experimental results for an illustrative sample of imaging data reveals that our new HBase policy results in a three-fold time improvement in conversion of classic DICOM to NiFTI file formats when compared with the default HBase region split policy, and nearly a six-fold improvement over a commonly available network file system (NFS) approach even for relatively small file sets. Moreover, file access latency is lower than network attached storage. PMID:28884169
2001-09-01
The high-tech art of digital signal processing (DSP) was pioneered at NASA's Jet Propulsion Laboratory (JPL) in the mid-1960s for use in the Apollo Lunar Landing Program. Designed to computer enhance pictures of the Moon, this technology became the basis for the Landsat Earth resources satellites and subsequently has been incorporated into a broad range of Earthbound medical and diagnostic tools. DSP is employed in advanced body imaging techniques including Computer-Aided Tomography, also known as CT and CATScan, and Magnetic Resonance Imaging (MRI). CT images are collected by irradiating a thin slice of the body with a fan-shaped x-ray beam from a number of directions around the body's perimeter. A tomographic (slice-like) picture is reconstructed from these multiple views by a computer. MRI employs a magnetic field and radio waves, rather than x-rays, to create images.
Forensic imaging tools for law enforcement
DOE Office of Scientific and Technical Information (OSTI.GOV)
SMITHPETER,COLIN L.; SANDISON,DAVID R.; VARGO,TIMOTHY D.
2000-01-01
Conventional methods of gathering forensic evidence at crime scenes are encumbered by difficulties that limit local law enforcement efforts to apprehend offenders and bring them to justice. Working with a local law-enforcement agency, Sandia National Laboratories has developed a prototype multispectral imaging system that can speed up the investigative search task and provide additional and more accurate evidence. The system, called the Criminalistics Light-imaging Unit (CLU), has demonstrated the capabilities of locating fluorescing evidence at crime scenes under normal lighting conditions and of imaging other types of evidence, such as untreated fingerprints, by direct white-light reflectance. CLU employs state ofmore » the art technology that provides for viewing and recording of the entire search process on videotape. This report describes the work performed by Sandia to design, build, evaluate, and commercialize CLU.« less
NASA Technical Reports Server (NTRS)
2001-01-01
This ASTER sub-image was acquired on April 3, 2000 and covers an area of 10.5 x 12 km centered on Jerusalem. The data were processed to create a simulated natural color image, with green vegetation and orange tile roofs. The old city is the lighter blue area in the right center of the image, surrounded by a 400-year-old wall built by the Ottoman Turks. Easily visible are the Dome of the Rock and the Al Aksa Mosque on the eastern side of the old city. Jerusalem is the source of three major religions Judaism, Christianity, and Islam and is considered holy by all three. The image is located at 31.7 degrees north latitude and 35.2 degrees east longitude. The U.S. science team is located at NASA's Jet Propulsion Laboratory, Pasadena, Calif. The Terra mission is part of NASA's Science Mission Directorate.NASA Technical Reports Server (NTRS)
Beckenbach, E. S. (Editor)
1984-01-01
It is more important than ever that engineers have an understanding of the future needs of clinical and research medicine, and that physicians know somthing about probable future developments in instrumentation capabilities. Only by maintaining such a dialog can the most effective application of technological advances to medicine be achieved. This workshop attempted to provide this kind of information transfer in the limited field of diagnostic imaging. Biomedical research at the Jet Propulsion Laboratory is discussed, taking into account imaging results from space exploration missions, as well as biomedical research tasks based in these technologies. Attention is also given to current and future indications for magnetic resonance in medicine, high speed quantitative digital microscopy, computer processing of radiographic images, computed tomography and its modern applications, position emission tomography, and developments related to medical ultrasound.
Chica, Manuel
2012-11-01
A novel method for authenticating pollen grains in bright-field microscopic images is presented in this work. The usage of this new method is clear in many application fields such as bee-keeping sector, where laboratory experts need to identify fraudulent bee pollen samples against local known pollen types. Our system is based on image processing and one-class classification to reject unknown pollen grain objects. The latter classification technique allows us to tackle the major difficulty of the problem, the existence of many possible fraudulent pollen types, and the impossibility of modeling all of them. Different one-class classification paradigms are compared to study the most suitable technique for solving the problem. In addition, feature selection algorithms are applied to reduce the complexity and increase the accuracy of the models. For each local pollen type, a one-class classifier is trained and aggregated into a multiclassifier model. This multiclassification scheme combines the output of all the one-class classifiers in a unique final response. The proposed method is validated by authenticating pollen grains belonging to different Spanish bee pollen types. The overall accuracy of the system on classifying fraudulent microscopic pollen grain objects is 92.3%. The system is able to rapidly reject pollen grains, which belong to nonlocal pollen types, reducing the laboratory work and effort. The number of possible applications of this authentication method in the microscopy research field is unlimited. Copyright © 2012 Wiley Periodicals, Inc.
Integrating DICOM structure reporting (SR) into the medical imaging informatics data grid
NASA Astrophysics Data System (ADS)
Lee, Jasper; Le, Anh; Liu, Brent
2008-03-01
The Medical Imaging Informatics (MI2) Data Grid developed at the USC Image Processing and Informatics Laboratory enables medical images to be shared securely between multiple imaging centers. Current applications include an imaging-based clinical trial setting where multiple field sites perform image acquisition and a centralized radiology core performs image analysis, often using computer-aided diagnosis tools (CAD) that generate a DICOM-SR to report their findings and measurements. As more and more CAD tools are being developed in the radiology field, the generated DICOM Structure Reports (SR) holding key radiological findings and measurements that are not part of the DICOM image need to be integrated into the existing Medical Imaging Informatics Data Grid with the corresponding imaging studies. We will discuss the significance and method involved in adapting DICOM-SR into the Medical Imaging Informatics Data Grid. The result is a MI2 Data Grid repository from which users can send and receive DICOM-SR objects based on the imaging-based clinical trial application. The services required to extract and categorize information from the structured reports will be discussed, and the workflow to store and retrieve a DICOM-SR file into the existing MI2 Data Grid will be shown.
Laboratory Demonstration of Axicon-Lens Coronagraph
NASA Astrophysics Data System (ADS)
Choi, Jaeho; Jea, Geonho
2018-01-01
The results of laboratory based experiments of the proposed coronagraph using axicon-lenses that is conjunction with a method of noninterferometric quantitative phase imaging for direct imaging of exoplanets is will present. The light source is passing through tiny holes drilled on the thin metal plate is used as the simulated stellar and its companions. Those diffracted light at the edge of the holes bears a similarity to the light from the bright stellar. Those images are evaginated about the optical axis after the maximum focal length of the first axicon lens. Then the evaginated images of have cut off using the motorized iris which means the suppressed the central stellar light preferentially. Various length between the holes which represent the angular distance are examined. The laboratory experimental results are shown that the axicon-lens coronagraph has feature of ability to achieve the smaller IWA than l/D and high-contrast direct imaging. The laboratory based axicon-lens coronagraph imaging support the symbolic computation results which has potential in direct imaging for finding exoplanet and various astrophysical activities. The setup of the coronagraph is simple to build and is durable to operate. Moreover it can be transported the planets images to a broadband spectrometric instrument that able to investigate the constituent of the planetary system.
1983-09-01
Report Al-TR-346. Artifcial Intelligence Laboratory, Mamachusetts Institute of Tech- niugy. Cambridge, Mmeh mett. June 19 [G.usmn@ A. Gaman-Arenas...Testbed Coordinator, 415/859-4395 Artificial Intelligence Center Computer Science and Technology Division Prepared for: Defense Advanced Research...to support processing of aerial photographs for such military applications as cartography, Intelligence , weapon guidance, and targeting. A key
Pamela E. Padgett; Sally D. Parry; Andrzej Bytnerowicz; Robert L. Heath
2009-01-01
Nitric acid vapor is produced by the same photochemical processes that produce ozone. In the laboratory, concentrated nitric acid is a strong acid and a powerful oxidant. In the environment, where the concentrations are much lower, it is an innocuous source of plant nitrogen. As an air pollutant, which mode of action does dry deposition of nitric...
Evaluation of dispersivity coefficients by means of a laboratory image analysis.
Citarella, Donato; Cupola, Fausto; Tanda, Maria Giovanna; Zanini, Andrea
2015-01-01
This paper describes the application of an innovative procedure that allows the estimation of longitudinal and transverse dispersivities in an experimental plume devised in a laboratory sandbox. The phenomenon of transport in porous media is studied using sodium fluorescein as tracer. The fluorescent excitation was achieved by using blue light and the concentration data were obtained through the processing of side wall images collected with a high resolution color digital camera. After a calibration process, the relationship between the luminosity of the emitted fluorescence and the fluorescein concentration was determined at each point of the sandbox. The relationships were used to describe the evolution of the transport process quantitatively throughout the entire domain. Some check tests were performed in order to verify the reliability of the experimental device. Numerical flow and transport models of the sandbox were developed and calibrated comparing computed and observed flow rates and breakthrough curves. The estimation of the dispersivity coefficients was carried out by analyzing the concentration field deduced from the images collected during the experiments; the dispersivity coefficients were evaluated in the domain zones where the tracer affected the porous medium under the hypothesis that the transport phenomenon is described by advection-dispersion equation (ADE) and by computing the differential components of the concentration by means of a numerical leap-frog scheme. The values determined agree with the ones referred in literature for similar media and with the coefficients obtained by calibrating the numerical model. Very interesting considerations have been made from the analysis of the performance of the methodology at different locations in the flow domain and phases of the plume evolution. Copyright © 2014 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Bird, M. B.; Butler, S. L.; Hawkes, C. D.; Kotzer, T.
2014-12-01
The use of numerical simulations to model physical processes occurring within subvolumes of rock samples that have been characterized using advanced 3D imaging techniques is becoming increasingly common. Not only do these simulations allow for the determination of macroscopic properties like hydraulic permeability and electrical formation factor, but they also allow the user to visualize processes taking place at the pore scale and they allow for multiple different processes to be simulated on the same geometry. Most efforts to date have used specialized research software for the purpose of simulations. In this contribution, we outline the steps taken to use commercial software Avizo to transform a 3D synchrotron X-ray-derived tomographic image of a rock core sample to an STL (STereoLithography) file which can be imported into the commercial multiphysics modeling package COMSOL. We demonstrate that the use of COMSOL to perform fluid and electrical current flow simulations through the pore spaces. The permeability and electrical formation factor of the sample are calculated and compared with laboratory-derived values and benchmark calculations. Although the simulation domains that we were able to model on a desk top computer were significantly smaller than representative elementary volumes, and we were able to establish Kozeny-Carman and Archie's Law trends on which laboratory measurements and previous benchmark solutions fall. The rock core samples include a Fountainebleau sandstone used for benchmarking and a marly dolostone sampled from a well in the Weyburn oil field of southeastern Saskatchewan, Canada. Such carbonates are known to have complicated pore structures compared with sandstones, yet we are able to calculate reasonable macroscopic properties. We discuss the computing resources required.
Multi-modality molecular imaging: pre-clinical laboratory configuration
NASA Astrophysics Data System (ADS)
Wu, Yanjun; Wellen, Jeremy W.; Sarkar, Susanta K.
2006-02-01
In recent years, the prevalence of in vivo molecular imaging applications has rapidly increased. Here we report on the construction of a multi-modality imaging facility in a pharmaceutical setting that is expected to further advance existing capabilities for in vivo imaging of drug distribution and the interaction with their target. The imaging instrumentation in our facility includes a microPET scanner, a four wavelength time-domain optical imaging scanner, a 9.4T/30cm MRI scanner and a SPECT/X-ray CT scanner. An electronics shop and a computer room dedicated to image analysis are additional features of the facility. The layout of the facility was designed with a central animal preparation room surrounded by separate laboratory rooms for each of the major imaging modalities to accommodate the work-flow of simultaneous in vivo imaging experiments. This report will focus on the design of and anticipated applications for our microPET and optical imaging laboratory spaces. Additionally, we will discuss efforts to maximize the daily throughput of animal scans through development of efficient experimental work-flows and the use of multiple animals in a single scanning session.
NASA Astrophysics Data System (ADS)
Hashimoto, Atsushi; Suehara, Ken-Ichiro; Kameoka, Takaharu
To measure the quantitative surface color information of agricultural products with the ambient information during cultivation, a color calibration method for digital camera images and a remote monitoring system of color imaging using the Web were developed. Single-lens reflex and web digital cameras were used for the image acquisitions. The tomato images through the post-ripening process were taken by the digital camera in both the standard image acquisition system and in the field conditions from the morning to evening. Several kinds of images were acquired with the standard RGB color chart set up just behind the tomato fruit on a black matte, and a color calibration was carried out. The influence of the sunlight could be experimentally eliminated, and the calibrated color information consistently agreed with the standard ones acquired in the system through the post-ripening process. Furthermore, the surface color change of the tomato on the tree in a greenhouse was remotely monitored during maturation using the digital cameras equipped with the Field Server. The acquired digital color images were sent from the Farm Station to the BIFE Laboratory of Mie University via VPN. The time behavior of the tomato surface color change during the maturing process could be measured using the color parameter calculated based on the obtained and calibrated color images along with the ambient atmospheric record. This study is a very important step in developing the surface color analysis for both the simple and rapid evaluation of the crop vigor in the field and to construct an ambient and networked remote monitoring system for food security, precision agriculture, and agricultural research.
Visual detection of particulates in processed meat products by x ray
NASA Astrophysics Data System (ADS)
Schatzki, Thomas F.; Young, Richard; Haff, Ron P.; Eye, J.; Wright, G.
1995-01-01
A test has been run to study the efficacy of detecting particulate contaminants in processed meat samples by manual observation of line-scanned x-ray images. Six hundred processed product samples arriving over a 3 month period at a national USDA-FSIS laboratory were scanned at 230 cm2sec with 0.5 X 0.5 mm resolution, using 50 KV, 13 ma excitation, with digital interfacing and image correction. Images were inspected off-line, using interactive image enhancement. Forty percent of the samples were spiked, blind to the analyst, in order to establish the manual recognition rate as a function of sample thickness [1 - 10 cm] and texture of the x-ray image [smooth/textured], as well as spike composition [wood/bone/glass], size [1 - 4 mm] and shape [splinter/round]. The results have been analyzed using maximum likelihood logistic regression. In meat packages less than 6 cm thick, 2 mm bone chips are easily recognized, 1 mm glass splinters with some difficulty, while wood is generally missed even at 4 mm. Operational feasibility in a time-constrained setting has bee confirmed. One half percent of the samples arriving from the field contained bone slivers > 1 cm long, one half percent contained metallic material, while 4% contained particulates exceeding 3.2 mm in size. All of the latter appeared to be bone fragments.
NASA Astrophysics Data System (ADS)
Strom, K.; Tran, D. A.; Dillon, B.
2017-12-01
Predicting the size and settling velocity of mud suspensions under the influence of flocculation is crucial for the accurate prediction of mud movement and deposition in sediment transport modeling of environments such as agricultural streams, large coastal rivers, estuaries, river plumes, boundary currents, and turbidity currents. Yet, collecting accurate and high resolution data on mud flocs is difficult. For example, measurement of flocs with camera systems generally provide the best avenue for preserving floc structure and obtaining accurate information about true floc sizes. However, capturing images of flocs in swirling turbulent flows can be difficult and often limited to suspensions where concentrations are low (< 100 mg/L). As a result, models that account for the influence of flocculation on mud settling velocity are based on sparse data that often present non-congruent functionality in floc size and settling velocity with basic influencers such as suspended sediment concentration. Here we present developments in image acquisition systems and processing methods that allow for measurement of floc size distributions in turbulent suspensions approaching 500 mg/L. At the heart of these developments are the introduction of a simple flow-through cell, modern digital sensor technology, and automated image processing. The combination of these elements allows for high-resolution times series of floc size populations to be measured in turbulent suspensions over a much broader range of suspended sediment concentration than has previously been possible — all without the need to transfer samples to a separate imaging container. We show applications and results from these developments in laboratory experiments and highlight their use in a newly-developed, low-cost, and field-deployable floc camera system.
NASA Astrophysics Data System (ADS)
Sou, I.; Calantoni, J.; Reed, A. H.; Furukawa, Y.
2012-12-01
A synchronized dual stereo particle image velocimetry (PIV) measurement technique is used to examine the erosion process of a cohesive sediment core in the Small Oscillatory Flow Tunnel (S-OFT) in the Sediment Dynamics Laboratory at the Naval Research Laboratory, Stennis Space Center, MS. The PIV system uses four cameras and a dual cavity Nd:YAG laser. The system allows for a pair of stereo PIV windows of about 10 cm by 10 cm each to be arbitrarily located within a single light sheet. Image pairs were acquired with all four cameras at 50 Hz for 50 consecutive seconds for each flow condition. The stereo PIV windows were positioned on either side of sediment cores inserted along the centerline of the S-OFT allowing for a total measurement window of about 20 cm long by 10 cm high with sub-millimeter spacing on resolved velocity vectors. The oscillatory flows are generated by two types of driving mechanism (scotch yoke and crank lever) for converting the rotational motion of the flywheel into the linear motion of a piston. The period of oscillation ranged from 2.86 to 6.12 seconds with constant semi-excursion amplitude in the test section of 9 cm. Two kinds of inorganic sediment samples were examined. One was a mixture of 50% kaolinite and 50% 500-micron sand under flows driven by the crank lever mechanism. Another sediment core was a mixture of 50% mud collected in Galveston Bay, TX, and 50% 250-micron sand under flows driven by the scotch-yoke mechanism. During the erosion process, Kelvin-Helmholtz instabilities were observed as the flow accelerated in each direction and eventually were broken down when the flow reversed. An example of the instantaneous velocity field superimposed on the raw image is shown in Figure 1. The relative concentration of suspended sediments under different flow conditions was estimated using the intensity of light scattered from the sediment particles in suspension. By subtracting the initial light scattered from the mud core, the residual light intensity was assumed to be scattered from suspended sediments eroded from the core. Relative comparisons were only made using the same sample mixture since it is difficult, if not impossible, to calibrate the light scattering from different sediments.; Figure 1. An example of the instantaneous time-resolved velocity field superimposed on the raw image.
Fine Collimator Grids Using Silicon Metering Structure
NASA Technical Reports Server (NTRS)
Eberhard, Carol
1998-01-01
The project Fine Collimator Grids Using Silicon Metering Structure was managed by Dr. Carol Eberhard of the Electromagnetic Systems & Technology Department (Space & Technology Division) of TRW who also wrote this final report. The KOH chemical etching of the silicon wafers was primarily done by Dr. Simon Prussin of the Electrical Engineering Department of UCLA at the laboratory on campus. Moshe Sergant of the Superconductor Electronics Technology Department (Electronics Systems & Technology Division) of TRW and Dr. Prussin were instrumental in developing the low temperature silicon etching processes. Moshe Sergant and George G. Pinneo of the Microelectronics Production Department (Electronics Systems & Technology Division) of TRW were instrumental in developing the processes for filling the slots etched in the silicon wafers with metal-filled materials. Their work was carried out in the laboratories at the Space Park facility. Moshe Sergant is also responsible for the impressive array of Scanning Electron Microscope images with which the various processes were monitored. Many others also contributed their time and expertise to the project. I wish to thank them all.
Multi-monochromatic imaging of defect-induced mix experiments at OMEGA
NASA Astrophysics Data System (ADS)
Mancini, Roberto; Johns, Heather; Joshi, Tirtha; Mayes, Daniel; Durmaz, Tunay; Nagayama, Taisuke; Hsu, Scott; Tregillis, Ian; Krasheninnikova, Natalia; Cobble, James; Murphy, Thomas; Shah, Rahul; Kyrala, George; Hakel, Peter; Bradley, Paul; Schmitt, Mark
2012-10-01
In a series of polar-drive implosions performed at OMEGA for the defect-induced mix experiment (DIME) campaign of Los Alamos National Laboratory, two identical multi-monochromatic imager (MMI) instruments were fielded to record gated, x-ray spectrally-resolved images of D-filled Ti-doped plastic shells. The shells included a defect on the equatorial plane to study defect-induced mix while no-defect shells were employed in reference shots. The MMI data recorded simultaneously along quasi-orthogonal lines-of-sight afforded unique observations of the implosion based on the K-shell spectral signatures of the Ti tracer. Several analysis techniques have been used to process the MMI data (T. Nagayama et al, J. App. Phys. 109, 093303 (2011)) in order to study defect-induced mixing by tracking the spatial distribution and state of the tracer. Comparisons were made with results from post-processed 2D and 3D simulations to provide further insight into the interpretation of the experimental results and to constrain the simulation physics model.
Image Processing Occupancy Sensor
DOE Office of Scientific and Technical Information (OSTI.GOV)
The Image Processing Occupancy Sensor, or IPOS, is a novel sensor technology developed at the National Renewable Energy Laboratory (NREL). The sensor is based on low-cost embedded microprocessors widely used by the smartphone industry and leverages mature open-source computer vision software libraries. Compared to traditional passive infrared and ultrasonic-based motion sensors currently used for occupancy detection, IPOS has shown the potential for improved accuracy and a richer set of feedback signals for occupant-optimized lighting, daylighting, temperature setback, ventilation control, and other occupancy and location-based uses. Unlike traditional passive infrared (PIR) or ultrasonic occupancy sensors, which infer occupancy based only onmore » motion, IPOS uses digital image-based analysis to detect and classify various aspects of occupancy, including the presence of occupants regardless of motion, their number, location, and activity levels of occupants, as well as the illuminance properties of the monitored space. The IPOS software leverages the recent availability of low-cost embedded computing platforms, computer vision software libraries, and camera elements.« less
Compact time- and space-integrating SAR processor: performance analysis
NASA Astrophysics Data System (ADS)
Haney, Michael W.; Levy, James J.; Michael, Robert R., Jr.; Christensen, Marc P.
1995-06-01
Progress made during the previous 12 months toward the fabrication and test of a flight demonstration prototype of the acousto-optic time- and space-integrating real-time SAR image formation processor is reported. Compact, rugged, and low-power analog optical signal processing techniques are used for the most computationally taxing portions of the SAR imaging problem to overcome the size and power consumption limitations of electronic approaches. Flexibility and performance are maintained by the use of digital electronics for the critical low-complexity filter generation and output image processing functions. The results reported for this year include tests of a laboratory version of the RAPID SAR concept on phase history data generated from real SAR high-resolution imagery; a description of the new compact 2D acousto-optic scanner that has a 2D space bandwidth product approaching 106 sports, specified and procured for NEOS Technologies during the last year; and a design and layout of the optical module portion of the flight-worthy prototype.
A method to classify schizophrenia using inter-task spatial correlations of functional brain images.
Michael, Andrew M; Calhoun, Vince D; Andreasen, Nancy C; Baum, Stefi A
2008-01-01
The clinical heterogeneity of schizophrenia (scz) and the overlap of self reported and observed symptoms with other mental disorders makes its diagnosis a difficult task. At present no laboratory-based or image-based diagnostic tool for scz exists and such tools are desired to support existing methods for more precise diagnosis. Functional magnetic resonance imaging (fMRI) is currently employed to identify and correlate cognitive processes related to scz and its symptoms. Fusion of multiple fMRI tasks that probe different cognitive processes may help to better understand hidden networks of this complex disorder. In this paper we utilize three different fMRI tasks and introduce an approach to classify subjects based on inter-task spatial correlations of brain activation. The technique was applied to groups of patients and controls and its validity was checked with the leave-one-out method. We show that the classification rate increases when information from multiple tasks are combined.
Photo by Voyager 1 (JPL) The spacecraft took this photo of the planet Jupiter on Jan 24, while still
NASA Technical Reports Server (NTRS)
1979-01-01
Photo by Voyager 1 (JPL) The spacecraft took this photo of the planet Jupiter on Jan 24, while still more than 25 million miles (40 million kilometers) away. As the spacecraft draws closer to the planet (about 1 million kilometers a day) more details are emergng in the turbulent clouds. The Great Red Spot shows prominently below center, surrounded by what scientists call a remarkably complex region of the giant planet's atmosphere. An elongated yellow cloud within the Great Red Spot is swirling around the spot's interior boundary in a counterclockwise direction with a period of a little less than six days, confirming the whirlpool-like circulation that astronomers have suspected from ground-based photographs. Ganymede, Jupiter's largest satellite, can be seen to the lower left of the planet. Ganymede is a planet-sized body larger than Mercury. This color photo was assembled at Jet Propulsion Laboratory's Image Processing Lab from there black and white images taken through filters. The Voyagers are managed for NASA's Office of Space Science by Jet Propulsion Laboratory. (ref: P-20945C Mission Image 1-9)
First Close-up Image of Jupiter from Voyager 1
NASA Technical Reports Server (NTRS)
1979-01-01
NASA'S Voyager 1 took this picture of the planet Jupiter on Saturday, Jan. 6, the first in its three-month-long, close-up investigation of the largest planet. The spacecraft, flying toward a March 5 closest approach, was 35.8 million miles (57.6 million kilometers) from Jupiter and 371.7 million miles (598.2 million kilometers) from Earth when the picture was taken. As the Voyager cameras begin their meteorological surveillance of Jupiter, they reveal a dynamic atmosphere with more convective structure than had previously been thought. While the smallest atmospheric features seen in this picture are still as large as 600 miles (1,000 kilometers) across, Voyager will be able to detect individual storm systems as small as 3 miles (5 kilometers) at closest approach. The Great Red Spot can be seen near the limb at the far right. Most of the other features are too small to be seen in terrestrial telescopes. This picture is really a combination of three images taken through color filters, then transmitted to Jet Propulsion Laboratory through the Deep Space Network's antennas, and assembled by JPL's Image Processing Lab. The Voyager Project is managed for NASA by Caltech's Jet Propulsion Laboratory.
NASA Astrophysics Data System (ADS)
Heath, J. E.; Dewers, T. A.; Yoon, H.; Mozley, P.
2016-12-01
Heterogeneity from the nanometer to core and larger length scales is a major challenge to understanding coupled processes in shale. To develop methods to address this challenge, we present application of high throughput multi-beam scanning electron microscopy (mSEM) and nano-to-micro-scale mechanics to the Mancos Shale. We use a 61-beam mSEM to collect 6 nm resolution SEM images at the scale of several square millimeters. These images are analyzed for pore size and shape characteristics including spatial correlation and structure. Nano-indentation, micropillar compression, and axisymmetric testing at multiple length scales allows for examining the influence of sampling size on mechanical response. The combined data set is used to: investigate representative elementary volumes (and areas for the 2D images) for the Mancos Shale; determine if scale separation occurs; and determine if transport and mechanical properties at a given length scale can be statistically defined. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.
NASA Technical Reports Server (NTRS)
2003-01-01
We propose a multifunctional X-ray facility for the Materials, Biotechnology and Life Sciences Programs to visualize formation and behavior dynamics of materials, biomaterials, and living organisms, tissues and cells. The facility will combine X-ray topography, phase micro-imaging and scattering capabilities with sample units installed on the goniometer. This should allow, for the first time, to monitor under well defined conditions, in situ, in real time: creation of imperfections during growth of semiconductors, metal, dielectric and biomacromolecular crystals and films, high-precision diffraction from crystals within a wide range of temperatures and vapor, melt, solution conditions, internal morphology and changes in living organisms, tissues and cells, diffraction on biominerals, nanotubes and particles, radiation damage, also under controlled formation/life conditions. The system will include an ultrabright X-ray source, X-ray mirror, monochromator, image-recording unit, detectors, and multipurpose diffractometer that fully accommodate and integrate furnaces and samples with other experimental environments. The easily adjustable laboratory and flight versions will allow monitoring processes under terrestrial and microgravity conditions. The flight version can be made available using a microsource combined with multilayer or capillary optics.
Digital map databases in support of avionic display systems
NASA Astrophysics Data System (ADS)
Trenchard, Michael E.; Lohrenz, Maura C.; Rosche, Henry, III; Wischow, Perry B.
1991-08-01
The emergence of computerized mission planning systems (MPS) and airborne digital moving map systems (DMS) has necessitated the development of a global database of raster aeronautical chart data specifically designed for input to these systems. The Naval Oceanographic and Atmospheric Research Laboratory''s (NOARL) Map Data Formatting Facility (MDFF) is presently dedicated to supporting these avionic display systems with the development of the Compressed Aeronautical Chart (CAC) database on Compact Disk Read Only Memory (CDROM) optical discs. The MDFF is also developing a series of aircraft-specific Write-Once Read Many (WORM) optical discs. NOARL has initiated a comprehensive research program aimed at improving the pilots'' moving map displays current research efforts include the development of an alternate image compression technique and generation of a standard set of color palettes. The CAC database will provide digital aeronautical chart data in six different scales. CAC is derived from the Defense Mapping Agency''s (DMA) Equal Arc-second (ARC) Digitized Raster Graphics (ADRG) a series of scanned aeronautical charts. NOARL processes ADRG to tailor the chart image resolution to that of the DMS display while reducing storage requirements through image compression techniques. CAC is being distributed by DMA as a library of CDROMs.
NASA Astrophysics Data System (ADS)
Ranney, Kenneth; Phelan, Brian; Sherbondy, Kelly; Kirose, Getachew; Smith, Gregory; Clark, John; Harrison, Arthur; Ressler, Marc; Nguyen, Lam; Narayanan, Ram
2017-05-01
A new, versatile, UHF/L band, ultrawideband (UWB), vehicle-mounted radar system developed at the U.S. Army Research Laboratory (ARL) has recently been exercised at an arid U.S. test site. The unique switching scheme implemented to record data from all receive channels is described, along with the current calibration procedure. Radar and global positioning system (GPS) data collected in both forwardand side-looking configurations are processed, and synthetic aperture radar (SAR) images are formed. Results are presented for various target emplacement scenarios.
Search for life on Mars in surface samples: Lessons from the 1999 Marsokhod rover field experiment
Newsom, Horton E.; Bishop, J.L.; Cockell, C.; Roush, T.L.; Johnson, J. R.
2001-01-01
The Marsokhod 1999 field experiment in the Mojave Desert included a simulation of a rover-based sample selection mission. As part of this mission, a test was made of strategies and analytical techniques for identifying past or present life in environments expected to be present on Mars. A combination of visual clues from high-resolution images and the detection of an important biomolecule (chlorophyll) with visible/near-infrared (NIR) spectroscopy led to the successful identification of a rock with evidence of cryptoendolithic organisms. The sample was identified in high-resolution images (3 times the resolution of the Imager for Mars Pathfinder camera) on the basis of a green tinge and textural information suggesting the presence of a thin, partially missing exfoliating layer revealing the organisms. The presence of chlorophyll bands in similar samples was observed in visible/NIR spectra of samples in the field and later confirmed in the laboratory using the same spectrometer. Raman spectroscopy in the laboratory, simulating a remote measurement technique, also detected evidence of carotenoids in samples from the same area. Laboratory analysis confirmed that the subsurface layer of the rock is inhabited by a community of coccoid Chroococcidioposis cyanobacteria. The identification of minerals in the field, including carbonates and serpentine, that are associated with aqueous processes was also demonstrated using the visible/NIR spectrometer. Other lessons learned that are applicable to future rover missions include the benefits of web-based programs for target selection and for daily mission planning and the need for involvement of the science team in optimizing image compression schemes based on the retention of visual signature characteristics. Copyright 2000 by the American Geophysical Union.
A user-friendly LabVIEW software platform for grating based X-ray phase-contrast imaging.
Wang, Shenghao; Han, Huajie; Gao, Kun; Wang, Zhili; Zhang, Can; Yang, Meng; Wu, Zhao; Wu, Ziyu
2015-01-01
X-ray phase-contrast imaging can provide greatly improved contrast over conventional absorption-based imaging for weakly absorbing samples, such as biological soft tissues and fibre composites. In this study, we introduced an easy and fast way to develop a user-friendly software platform dedicated to the new grating-based X-ray phase-contrast imaging setup at the National Synchrotron Radiation Laboratory of the University of Science and Technology of China. The control of 21 motorized stages, of a piezoelectric stage and of an X-ray tube are achieved with this software, it also covers image acquisition with a flat panel detector for automatic phase stepping scan. Moreover, a data post-processing module for signals retrieval and other custom features are in principle available. With a seamless integration of all the necessary functions in one software package, this platform greatly facilitate users' activities during experimental runs with this grating based X-ray phase contrast imaging setup.
Development of a Portable 3CCD Camera System for Multispectral Imaging of Biological Samples
Lee, Hoyoung; Park, Soo Hyun; Noh, Sang Ha; Lim, Jongguk; Kim, Moon S.
2014-01-01
Recent studies have suggested the need for imaging devices capable of multispectral imaging beyond the visible region, to allow for quality and safety evaluations of agricultural commodities. Conventional multispectral imaging devices lack flexibility in spectral waveband selectivity for such applications. In this paper, a recently developed portable 3CCD camera with significant improvements over existing imaging devices is presented. A beam-splitter prism assembly for 3CCD was designed to accommodate three interference filters that can be easily changed for application-specific multispectral waveband selection in the 400 to 1000 nm region. We also designed and integrated electronic components on printed circuit boards with firmware programming, enabling parallel processing, synchronization, and independent control of the three CCD sensors, to ensure the transfer of data without significant delay or data loss due to buffering. The system can stream 30 frames (3-waveband images in each frame) per second. The potential utility of the 3CCD camera system was demonstrated in the laboratory for detecting defect spots on apples. PMID:25350510
MIGS-GPU: Microarray Image Gridding and Segmentation on the GPU.
Katsigiannis, Stamos; Zacharia, Eleni; Maroulis, Dimitris
2017-05-01
Complementary DNA (cDNA) microarray is a powerful tool for simultaneously studying the expression level of thousands of genes. Nevertheless, the analysis of microarray images remains an arduous and challenging task due to the poor quality of the images that often suffer from noise, artifacts, and uneven background. In this study, the MIGS-GPU [Microarray Image Gridding and Segmentation on Graphics Processing Unit (GPU)] software for gridding and segmenting microarray images is presented. MIGS-GPU's computations are performed on the GPU by means of the compute unified device architecture (CUDA) in order to achieve fast performance and increase the utilization of available system resources. Evaluation on both real and synthetic cDNA microarray images showed that MIGS-GPU provides better performance than state-of-the-art alternatives, while the proposed GPU implementation achieves significantly lower computational times compared to the respective CPU approaches. Consequently, MIGS-GPU can be an advantageous and useful tool for biomedical laboratories, offering a user-friendly interface that requires minimum input in order to run.
Permutation coding technique for image recognition systems.
Kussul, Ernst M; Baidyk, Tatiana N; Wunsch, Donald C; Makeyev, Oleksandr; Martín, Anabel
2006-11-01
A feature extractor and neural classifier for image recognition systems are proposed. The proposed feature extractor is based on the concept of random local descriptors (RLDs). It is followed by the encoder that is based on the permutation coding technique that allows to take into account not only detected features but also the position of each feature on the image and to make the recognition process invariant to small displacements. The combination of RLDs and permutation coding permits us to obtain a sufficiently general description of the image to be recognized. The code generated by the encoder is used as an input data for the neural classifier. Different types of images were used to test the proposed image recognition system. It was tested in the handwritten digit recognition problem, the face recognition problem, and the microobject shape recognition problem. The results of testing are very promising. The error rate for the Modified National Institute of Standards and Technology (MNIST) database is 0.44% and for the Olivetti Research Laboratory (ORL) database it is 0.1%.
NASA Technical Reports Server (NTRS)
Matsunaga, Tsuneo
1993-01-01
Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) is a Japanese future imaging sensor which has five channels in thermal infrared (TIR) region. To extract spectral emissivity information from ASTER and/or TIMS data, various temperature-emissivity (T-E) separation methods have been developed to date. Most of them require assumptions on surface emissivity, in which emissivity measured in a laboratory is often used instead of in-situ pixel-averaged emissivity. But if these two emissivities are different, accuracies of separated emissivity and surface temperature are reduced. In this study, the difference between laboratory and in-situ pixel-averaged emissivity and its effect on T-E separation are discussed. TIMS data of an area containing both rocks and vegetation were also processed to retrieve emissivity spectra using two T-E separation methods.
Confocal microscopy and 3-D distribution of dead cells in cryopreserved pancreatic islets
NASA Astrophysics Data System (ADS)
Merchant, Fatima A.; Aggarwal, Shanti J.; Diller, Kenneth R.; Bartels, Keith A.; Bovik, Alan C.
1992-06-01
Our laboratory is involved in studies of changes in shape and size of biological specimens under osmotic stress at ambient and sub-zero temperatures. This paper describes confocal microscopy, image processing and analysis of 3-D distribution of cells in acridine orange/propidium iodide (AO/PI) fluorescent stained frozen-thawed islet of Langerhans. Isolated and cultured rat pancreatic islets were frozen and thawed in 2 M dimethylsulfoxide and examined under a Zeiss laser scanning confocal microscope. Two micrometers to five micrometers serial sections of the islets were obtained and processed to obtain high contrast images which were later processed in two steps. The first step consisted of the isolation of the region of interest by template masking followed by grey level thresholding to obtain a binary image. Three-dimensional blob coloring algorithm was applied and the number of voxels in each region and the number of regions were counted. The volumetric distribution of the dead cells in the islets was computed by calculating the distance from the center of each blob to the centroid of the 3-D image. An increase in the number of blobs moving from the center toward the periphery of the islet was observed indicating that the freeze damage was more concentrated in the outer edges of the islet.
Advancements of labelled radio-pharmaceutics imaging with the PIM-MPGD
NASA Astrophysics Data System (ADS)
Donnard, J.; Arlicot, N.; Berny, R.; Carduner, H.; Leray, P.; Morteau, E.; Servagent, N.; Thers, D.
2009-11-01
The Beta autoradiography is widely used in pharmacology or in biological fields to study the response of an organism to a certain kind of molecule. The image of the distribution is processed by studying the concentration of the radioactivity into different organs. We report on the development of an integrated apparatus based on a PIM device (Parallel Ionization Multiplier) able to process the image of 10 microscope slides at the same time over an area of 18*18 cm2. Thanks to a vacuum pump and a regulation gas circuit, 5 minutes is sufficient to begin an acquisition. All the electronics and the gas distribution are included in the structure leading to a transportable device. Special software has been developed to process data in real time with image visualization. Biological samples can be labelled with β emitters of low energy like 3H/14C or Auger electrons of 125I/99mTc. The measured spatial resolution is 30 μm in 3H and the trigger and the charge rate are constant over more than 6 days of acquisition showing good stability of the device. Moreover, collaboration with doctors and biologists of INSERM (National Institute for Medical Research in France) has started in order to demonstrate that MPGD's can be easily proposed outside a physics laboratory.
Shehata, Islam A; Ballard, John R; Casper, Andrew J; Hennings, Leah J; Cressman, Erik; Ebbini, Emad S
2014-02-01
To investigate the feasibility of using high-intensity focused ultrasound (HIFU), under dual-mode ultrasound arrays (DMUAs) guidance, to induce localized thermal damage inside ovaries without damage to the ovarian surface. Laboratory feasibility study. University-based laboratory. Ex vivo canine and bovine ovaries. DMUA-guided HIFU. Detection of ovarian damage by ultrasound imaging, gross pathology, and histology. It is feasible to induce localized thermal damage inside ovaries without damage to the ovarian surface. DMUA provided sensitive imaging feedback regarding the anatomy of the treated ovaries and the ablation process. Different ablation protocols were tested, and thermal damage within the treated ovaries was histologically characterized. The absence of damage to the ovarian surface may eliminate many of the complications linked to current laparoscopic ovarian drilling (LOD) techniques. HIFU may be used as a less traumatic tool to perform LOD. Copyright © 2014 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.
Post-launch validation of Multispectral Thermal Imager (MTI) data and algorithms
NASA Astrophysics Data System (ADS)
Garrett, Alfred J.; Kurzeja, Robert J.; O'Steen, B. L.; Parker, Matthew J.; Pendergast, Malcolm M.; Villa-Aleman, Eliel
1999-10-01
Sandia National Laboratories (SNL), Los Alamos National Laboratory (LANL) and the Savannah River Technology Center (SRTC) have developed a diverse group of algorithms for processing and analyzing the data that will be collected by the Multispectral Thermal Imager (MTI) after launch late in 1999. Each of these algorithms must be verified by comparison to independent surface and atmospheric measurements. SRTC has selected 13 sites in the continental U.S. for ground truth data collections. These sites include a high altitude cold water target (Crater Lake), cooling lakes and towers in the warm, humid southeastern U.S., Department of Energy (DOE) climate research sites, the NASA Stennis satellite Validation and Verification (V&V) target array, waste sites at the Savannah River Site, mining sites in the Four Corners area and dry lake beds in Nevada. SRTC has established mutually beneficial relationships with the organizations that manage these sites to make use of their operating and research data and to install additional instrumentation needed for MTI algorithm V&V.
NDE activities and technology transfer at Sandia National Laboratories
NASA Astrophysics Data System (ADS)
Shurtleff, W. W.
1993-11-01
The NDE, Photometrics, and Optical Data Reduction Department at Sandia National Laboratories in New Mexico provides nondestructive evaluation (NDE) support for all phases of research and development at Sandia. Present facilities and personnel provide radiography, acoustic monitoring, ultrasonic scanning, computed tomography, shearography/ESPI, infrared imaging, high speed and ultra-high speed photometrics, and image processing. Although the department includes photometrics and optical data reduction as well as NDE, I will refer to the NDE department from now on for simplicity. The NDE department has worked on technology transfer to organizations inside and outside the weapons complex. This work has been performed in all the Sandia business sectors: defense programs, energy and environment, and work for others. The technology transfer has been in the form of testing for product improvement such as validation of aircraft inspection equipment, consultation such as detecting lathe bearing slip for a major machine tool manufacturer, and products such as an acoustic sand detector for the oil and gas industry.
Handheld hyperspectral imager for standoff detection of chemical and biological aerosols
NASA Astrophysics Data System (ADS)
Hinnrichs, Michele; Jensen, James O.; McAnally, Gerard
2004-02-01
Pacific Advanced Technology has developed a small hand held imaging spectrometer, Sherlock, for gas leak and aerosol detection and imaging. The system is based on a patent technique that uses diffractive optics and image processing algorithms to detect spectral information about objects in the scene of the camera (IMSS Image Multi-spectral Sensing). This camera has been tested at Dugway Proving Ground and Dstl Porton Down facility looking at Chemical and Biological agent simulants. The camera has been used to investigate surfaces contaminated with chemical agent simulants. In addition to Chemical and Biological detection the camera has been used for environmental monitoring of green house gases and is currently undergoing extensive laboratory and field testing by the Gas Technology Institute, British Petroleum and Shell Oil for applications for gas leak detection and repair. The camera contains an embedded Power PC and a real time image processor for performing image processing algorithms to assist in the detection and identification of gas phase species in real time. In this paper we will present an over view of the technology and show how it has performed for different applications, such as gas leak detection, surface contamination, remote sensing and surveillance applications. In addition a sampling of the results form TRE field testing at Dugway in July of 2002 and Dstl at Porton Down in September of 2002 will be given.
A Macintosh-Based Scientific Images Video Analysis System
NASA Technical Reports Server (NTRS)
Groleau, Nicolas; Friedland, Peter (Technical Monitor)
1994-01-01
A set of experiments was designed at MIT's Man-Vehicle Laboratory in order to evaluate the effects of zero gravity on the human orientation system. During many of these experiments, the movements of the eyes are recorded on high quality video cassettes. The images must be analyzed off-line to calculate the position of the eyes at every moment in time. To this aim, I have implemented a simple inexpensive computerized system which measures the angle of rotation of the eye from digitized video images. The system is implemented on a desktop Macintosh computer, processes one play-back frame per second and exhibits adequate levels of accuracy and precision. The system uses LabVIEW, a digital output board, and a video input board to control a VCR, digitize video images, analyze them, and provide a user friendly interface for the various phases of the process. The system uses the Concept Vi LabVIEW library (Graftek's Image, Meudon la Foret, France) for image grabbing and displaying as well as translation to and from LabVIEW arrays. Graftek's software layer drives an Image Grabber board from Neotech (Eastleigh, United Kingdom). A Colour Adapter box from Neotech provides adequate video signal synchronization. The system also requires a LabVIEW driven digital output board (MacADIOS II from GW Instruments, Cambridge, MA) controlling a slightly modified VCR remote control used mainly to advance the video tape frame by frame.
Samei, Ehsan; Buhr, Egbert; Granfors, Paul; Vandenbroucke, Dirk; Wang, Xiaohui
2005-08-07
The modulation transfer function (MTF) is well established as a metric to characterize the resolution performance of a digital radiographic system. Implemented by various laboratories, the edge technique is currently the most widespread approach to measure the MTF. However, there can be differences in the results attributed to differences in the analysis technique employed. The objective of this study was to determine whether comparable results can be obtained from different algorithms processing identical images representative of those of current digital radiographic systems. Five laboratories participated in a round-robin evaluation of six different algorithms including one prescribed in the International Electrotechnical Commission (IEC) 62220-1 standard. The algorithms were applied to two synthetic and 12 real edge images from different digital radiographic systems including CR, and direct- and indirect-conversion detector systems. The results were analysed in terms of variability as well as accuracy of the resulting presampled MTFs. The results indicated that differences between the individual MTFs and the mean MTF were largely below 0.02. In the case of the two simulated edge images, all algorithms yielded similar results within 0.01 of the expected true MTF. The findings indicated that all algorithms tested in this round-robin evaluation, including the IEC-prescribed algorithm, were suitable for accurate MTF determination from edge images, provided the images are not excessively noisy. The agreement of the MTF results was judged sufficient for the measurement of the MTF necessary for the determination of the DQE.
Laboratory Study of Water Surface Roughness Generation by Wave-Current Interaction
NASA Technical Reports Server (NTRS)
Klinke, Jochen
2000-01-01
Within the framework of this project, the blocking of waves by inhomogeneous currents was studied. A laboratory experiment was conducted in collaboration with Steven R. Long at the linear wave tank of the NASA Air-Sea Interaction Facility, Wallops Island, VA during May 1999. Mechanically-generated waves were blocked approximately 3m upstream from the wave paddle by an opposing current. A false bottom was used to obtain a spatially varying flow field in the measurement section of the wave tank. We used an imaging slope gauge, which was mounted directly underneath the sloping section of the false tank bottom to observe the wave field. For a given current speed, the amplitude and the frequency of the waves was adjusted so that the blocking occurred within the observed footprint. Image sequences of up to 600 images at up 100 Hz sampling rate were recorded for an area of approximately 25cm x 25cm. Unlike previous measurements with wave wire gauges, the captured image sequences show the generation of the capillary waves at the blocking point and give detailed insight into the spatial and temporal evolution of the blocking process. The image data were used to study the wave-current interaction for currents from 5 to 25 cm/s and waves with frequencies between 1 and 3 Hz. First the images were calibrated with regard to size and slope. Then standard Fourier techniques as well the empirical mode decomposition method developed by Dr. Norden Huang and Dr. Steven R. Long were employed to quantify the wave number downshift from the gravity to the capillary regime.
The Second National Ballistics Imaging Comparison (NBIC-2)
Vorburger, TV; Yen, J; Song, JF; Thompson, RM; Renegar, TB; Zheng, A; Tong, M; Ols, M
2014-01-01
In response to the guidelines issued by the American Society of Crime Laboratory Directors/Laboratory Accreditation Board (ASCLD/LAB-International) to establish traceability and quality assurance in U.S. crime laboratories, NIST and the ATF initiated a joint project, entitled the National Ballistics Imaging Comparison (NBIC). The NBIC project aims to establish a national traceability and quality system for ballistics identifications in crime laboratories utilizing ATF’s National Integrated Ballistics Information Network (NIBIN). The original NBIC was completed in 2010. In the second NBIC, NIST Standard Reference Material (SRM) 2461 Cartridge Cases were used as reference standards, and 14 experts from 11 U.S. crime laboratories each performed 17 image acquisitions and correlations of the SRM cartridge cases over the course of about half a year. Resulting correlation scores were collected by NIST for statistical analyses, from which control charts and control limits were developed for the proposed quality system and for promoting future assessments and accreditations for firearm evidence in U.S. forensic laboratories in accordance with the ISO 17025 Standard. PMID:26601051
The Second National Ballistics Imaging Comparison (NBIC-2).
Vorburger, T V; Yen, J; Song, J F; Thompson, R M; Renegar, T B; Zheng, A; Tong, M; Ols, M
2014-01-01
In response to the guidelines issued by the American Society of Crime Laboratory Directors/Laboratory Accreditation Board (ASCLD/LAB-International) to establish traceability and quality assurance in U.S. crime laboratories, NIST and the ATF initiated a joint project, entitled the National Ballistics Imaging Comparison (NBIC). The NBIC project aims to establish a national traceability and quality system for ballistics identifications in crime laboratories utilizing ATF's National Integrated Ballistics Information Network (NIBIN). The original NBIC was completed in 2010. In the second NBIC, NIST Standard Reference Material (SRM) 2461 Cartridge Cases were used as reference standards, and 14 experts from 11 U.S. crime laboratories each performed 17 image acquisitions and correlations of the SRM cartridge cases over the course of about half a year. Resulting correlation scores were collected by NIST for statistical analyses, from which control charts and control limits were developed for the proposed quality system and for promoting future assessments and accreditations for firearm evidence in U.S. forensic laboratories in accordance with the ISO 17025 Standard.
Characteristics of coking coal burnout
DOE Office of Scientific and Technical Information (OSTI.GOV)
Nakamura, M.; Bailey, J.G.
An attempt was made to clarify the characteristics of coking coal burnout by the morphological analysis of char and fly ash samples. Laboratory-scale combustion testing, simulating an ignition process, was carried out for three kinds of coal (two coking coals and one non-coking coal for reference), and sampled chars were analyzed for size, shape and type by image analysis. The full combustion process was examined in industrial-scale combustion testing for the same kinds of coal. Char sampled at the burner outlet and fly ash at the furnace exit were also analyzed. The difference between the char type, swelling properties, agglomeration,more » anisotropy and carbon burnout were compared at laboratory scale and at industrial scale. As a result, it was found that coking coals produced chars with relatively thicker walls, which mainly impeded char burnout, especially for low volatile coals.« less
Test and Validation of the Mars Science Laboratory Robotic Arm
NASA Technical Reports Server (NTRS)
Robinson, M.; Collins, C.; Leger, P.; Kim, W.; Carsten, J.; Tompkins, V.; Trebi-Ollennu, A.; Florow, B.
2013-01-01
The Mars Science Laboratory Robotic Arm (RA) is a key component for achieving the primary scientific goals of the mission. The RA supports sample acquisition by precisely positioning a scoop above loose regolith or accurately preloading a percussive drill on Martian rocks or rover-mounted organic check materials. It assists sample processing by orienting a sample processing unit called CHIMRA through a series of gravity-relative orientations and sample delivery by positioning the sample portion door above an instrument inlet or the observation tray. In addition the RA facilitates contact science by accurately positioning the dust removal tool, Alpha Particle X-Ray Spectrometer (APXS) and the Mars Hand Lens Imager (MAHLI) relative to surface targets. In order to fulfill these seemingly disparate science objectives the RA must satisfy a variety of accuracy and performance requirements. This paper describes the necessary arm requirement specification and the test campaign to demonstrate these requirements were satisfied.
Spectral measurements of Terrestrial Mars Analogues: support for the ExoMars - Ma_Miss instrument
NASA Astrophysics Data System (ADS)
De Angelis, S.; De Sanctis, M. C.; Ammannito, E.; Di Iorio, T.; Carli, C.; Frigeri, A.; Capria, M. T.; Federico, C.; Boccaccini, A.; Capaccioni, F.; Giardino, M.; Cerroni, P.; Palomba, E.; Piccioni, G.
2013-09-01
The Ma_Miss (Mars Multispectral Imager for Subsurface Studies) instrument onboard of ExoMars 2018 mission to Mars will investigate the Martian subsoil down to a depth of 2 meters [1]. Ma_Miss is a miniaturized spectrometer, completely integrated within the drilling system of the ExoMars Pasteur rover; it will acquire spectra in the range 0.4-2.2μm, from the excavated borehole wall. The spectroscopic investigation of the subsurface materials will give us precious information about mineralogical, petrologic and geological processes, and will give insights about materials that have not been modified by surface processes such as erosion, weathering or oxidation. Spectroscopic measurements have been performed on Terrestrial Mars Analogues with the Ma_Miss laboratory model (breadboard). Moreover spectroscopic investigation of different sets of Terrestrial Mars Analogues is being carried on with different laboratory setups, as a support for the ExoMars-Ma_Miss instrument.
A Normal Incidence X-ray Telescope (NIXT) sounding rocket payload
NASA Technical Reports Server (NTRS)
Golub, Leon
1989-01-01
Work on the High Resolution X-ray (HRX) Detector Program is described. In the laboratory and flight programs, multiple copies of a general purpose set of electronics which control the camera, signal processing and data acquisition, were constructed. A typical system consists of a phosphor convertor, image intensifier, a fiber optics coupler, a charge coupled device (CCD) readout, and a set of camera, signal processing and memory electronics. An initial rocket detector prototype camera was tested in flight and performed perfectly. An advanced prototype detector system was incorporated on another rocket flight, in which a high resolution heterojunction vidicon tube was used as the readout device for the H(alpha) telescope. The camera electronics for this tube were built in-house and included in the flight electronics. Performance of this detector system was 100 percent satisfactory. The laboratory X-ray system for operation on the ground is also described.
NASA Astrophysics Data System (ADS)
Arzilli, F.; Cilona, A.; Mancini, L.; Tondi, E.
2016-09-01
In this work we propose a new methodology to calculate pore connectivity in granular rocks. This method is useful to characterize the pore networks of natural and laboratory compaction bands (CBs), and compare them with the host rock pore network. Data were collected using the synchrotron X-ray microtomography technique and quantitative analyses were carried out using the Pore3D software library. The porosity was calculated from segmented tridimensional images of deformed and pristine rocks. A process of skeletonization of the pore space was used to obtain the number of connected pores within the rock volume. By analyzing the skeletons the differences between natural and laboratory CBs were highlighted. The natural CB has a lower porosity than to the laboratory one. In natural CBs, the grain contacts appear welded, whereas laboratory CBs show irregular pore shape. Moreover, we assessed for the first time how pore connectivity evolves as a function of deformation, documenting the mechanism responsible for pore connectivity drop within the CBs.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Wall, Mark A.
The development of our Integrated Actinide Sample Preparation Laboratory (IASPL) commenced in 1998 driven by the need to perform transmission electron microscopy studies on naturally aged plutonium and its alloys looking for the microstructural effects of the radiological decay process (1). Remodeling and construction of a laboratory within the Chemistry and Materials Science Directorate facilities at LLNL was required to turn a standard radiological laboratory into a Radiological Materials Area (RMA) and Radiological Buffer Area (RBA) containing type I, II and III workplaces. Two inert atmosphere dry-train glove boxes with antechambers and entry/exit fumehoods (Figure 1), having a baseline atmospheremore » of 1 ppm oxygen and 1 ppm water vapor, a utility fumehood and a portable, and a third double-walled enclosure have been installed and commissioned. These capabilities, along with highly trained technical staff, facilitate the safe operation of sample preparation processes and instrumentation, and sample handling while minimizing oxidation or corrosion of the plutonium. In addition, we are currently developing the capability to safely transfer small metallographically prepared samples to a mini-SEM for microstructural imaging and chemical analysis. The gloveboxes continue to be the most crucial element of the laboratory allowing nearly oxide-free sample preparation for a wide variety of LLNL-based characterization experiments, which includes transmission electron microscopy, electron energy loss spectroscopy, optical microscopy, electrical resistivity, ion implantation, X-ray diffraction and absorption, magnetometry, metrological surface measurements, high-pressure diamond anvil cell equation-of-state, phonon dispersion measurements, X-ray absorption and emission spectroscopy, and differential scanning calorimetry. The sample preparation and materials processing capabilities in the IASPL have also facilitated experimentation at world-class facilities such as the Advanced Photon Source at Argonne National Laboratory, the European Synchrotron Radiation Facility in Grenoble, France, the Stanford Synchrotron Radiation Facility, the National Synchrotron Light Source at Brookhaven National Laboratory, the Advanced Light Source at Lawrence Berkeley National Laboratory, and the Triumph Accelerator in Canada.« less
NASA Astrophysics Data System (ADS)
Rizzo, R. E.; Healy, D.; Farrell, N. J.
2017-12-01
Numerous laboratory brittle deformation experiments have shown that a rapid transition exists in the behaviour of porous materials under stress: at a certain point, early formed tensile cracks interact and coalesce into a `single' narrow zone, the shear plane, rather than remaining distributed throughout the material. In this work, we present and apply a novel image processing tool which is able to quantify this transition between distributed (`stable') damage accumulation and localised (`unstable') deformation, in terms of size, density, and orientation of cracks at the point of failure. Our technique, based on a two-dimensional (2D) continuous Morlet wavelet analysis, can recognise, extract and visually separate the multi-scale changes occurring in the fracture network during the deformation process. We have analysed high-resolution SEM-BSE images of thin sections of Hopeman Sandstone (Scotland, UK) taken from core plugs deformed under triaxial conditions, with increasing confining pressure. Through this analysis, we can determine the relationship between the initial orientation of tensile microcracks and the final geometry of the through-going shear fault, exploiting the total areal coverage of the analysed image. In addition, by comparing patterns of fractures in thin sections derived from triaxial (σ1>σ2=σ3=Pc) laboratory experiments conducted at different confining pressures (Pc), we can quantitatively explore the relationship between the observed geometry and the inferred mechanical processes. The methodology presented here can have important implications for larger-scale mechanical problems related to major fault propagation. Just as a core plug scale fault localises through extension and coalescence of microcracks, larger faults also grow by extension and coalescence of segments in a multi-scale process by which microscopic cracks can ultimately lead to macroscopic faulting. Consequently, wavelet analysis represents a useful tool for fracture pattern recognition, applicable to the detection of the transitions occurring at the time of catastrophic rupture.
Charged-particle emission tomography
Ding, Yijun; Caucci, Luca; Barrett, Harrison H.
2018-01-01
Purpose Conventional charged-particle imaging techniques —such as autoradiography —provide only two-dimensional (2D) black ex vivo images of thin tissue slices. In order to get volumetric information, images of multiple thin slices are stacked. This process is time consuming and prone to distortions, as registration of 2D images is required. We propose a direct three-dimensional (3D) autoradiography technique, which we call charged-particle emission tomography (CPET). This 3D imaging technique enables imaging of thick tissue sections, thus increasing laboratory throughput and eliminating distortions due to registration. CPET also has the potential to enable in vivo charged-particle imaging with a window chamber or an endoscope. Methods Our approach to charged-particle emission tomography uses particle-processing detectors (PPDs) to estimate attributes of each detected particle. The attributes we estimate include location, direction of propagation, and/or the energy deposited in the detector. Estimated attributes are then fed into a reconstruction algorithm to reconstruct the 3D distribution of charged-particle-emitting radionuclides. Several setups to realize PPDs are designed. Reconstruction algorithms for CPET are developed. Results Reconstruction results from simulated data showed that a PPD enables CPET if the PPD measures more attributes than just the position from each detected particle. Experiments showed that a two-foil charged-particle detector is able to measure the position and direction of incident alpha particles. Conclusions We proposed a new volumetric imaging technique for charged-particle-emitting radionuclides, which we have called charged-particle emission tomography (CPET). We also proposed a new class of charged-particle detectors, which we have called particle-processing detectors (PPDs). When a PPD is used to measure the direction and/or energy attributes along with the position attributes, CPET is feasible. PMID:28370094
Charged-particle emission tomography.
Ding, Yijun; Caucci, Luca; Barrett, Harrison H
2017-06-01
Conventional charged-particle imaging techniques - such as autoradiography - provide only two-dimensional (2D) black ex vivo images of thin tissue slices. In order to get volumetric information, images of multiple thin slices are stacked. This process is time consuming and prone to distortions, as registration of 2D images is required. We propose a direct three-dimensional (3D) autoradiography technique, which we call charged-particle emission tomography (CPET). This 3D imaging technique enables imaging of thick tissue sections, thus increasing laboratory throughput and eliminating distortions due to registration. CPET also has the potential to enable in vivo charged-particle imaging with a window chamber or an endoscope. Our approach to charged-particle emission tomography uses particle-processing detectors (PPDs) to estimate attributes of each detected particle. The attributes we estimate include location, direction of propagation, and/or the energy deposited in the detector. Estimated attributes are then fed into a reconstruction algorithm to reconstruct the 3D distribution of charged-particle-emitting radionuclides. Several setups to realize PPDs are designed. Reconstruction algorithms for CPET are developed. Reconstruction results from simulated data showed that a PPD enables CPET if the PPD measures more attributes than just the position from each detected particle. Experiments showed that a two-foil charged-particle detector is able to measure the position and direction of incident alpha particles. We proposed a new volumetric imaging technique for charged-particle-emitting radionuclides, which we have called charged-particle emission tomography (CPET). We also proposed a new class of charged-particle detectors, which we have called particle-processing detectors (PPDs). When a PPD is used to measure the direction and/or energy attributes along with the position attributes, CPET is feasible. © 2017 The Authors. Medical Physics published by Wiley Periodicals, Inc. on behalf of American Association of Physicists in Medicine.
Miccoli, Laura; Delgado, Rafael; Rodríguez-Ruiz, Sonia; Guerra, Pedro; García-Mármol, Eduardo; Fernández-Santaella, M. Carmen
2014-01-01
In the last decades, food pictures have been repeatedly employed to investigate the emotional impact of food on healthy participants as well as individuals who suffer from eating disorders and obesity. However, despite their widespread use, food pictures are typically selected according to each researcher's personal criteria, which make it difficult to reliably select food images and to compare results across different studies and laboratories. Therefore, to study affective reactions to food, it becomes pivotal to identify the emotional impact of specific food images based on wider samples of individuals. In the present paper we introduce the Open Library of Affective Foods (OLAF), which is a set of original food pictures created to reliably select food pictures based on the emotions they prompt, as indicated by affective ratings of valence, arousal, and dominance and by an additional food craving scale. OLAF images were designed to allow simultaneous use with affective images from the International Affective Picture System (IAPS), which is a well-known instrument to investigate emotional reactions in the laboratory. The ultimate goal of the OLAF is to contribute to understanding how food is emotionally processed in healthy individuals and in patients who suffer from eating and weight-related disorders. The present normative data, which was based on a large sample of an adolescent population, indicate that when viewing affective non-food IAPS images, valence, arousal, and dominance ratings were in line with expected patterns based on previous emotion research. Moreover, when viewing food pictures, affective and food craving ratings were consistent with research on food cue processing. As a whole, the data supported the methodological and theoretical reliability of the OLAF ratings, therefore providing researchers with a standardized tool to reliably investigate the emotional and motivational significance of food. The OLAF database is publicly available at zenodo.org. PMID:25490404
Miccoli, Laura; Delgado, Rafael; Rodríguez-Ruiz, Sonia; Guerra, Pedro; García-Mármol, Eduardo; Fernández-Santaella, M Carmen
2014-01-01
In the last decades, food pictures have been repeatedly employed to investigate the emotional impact of food on healthy participants as well as individuals who suffer from eating disorders and obesity. However, despite their widespread use, food pictures are typically selected according to each researcher's personal criteria, which make it difficult to reliably select food images and to compare results across different studies and laboratories. Therefore, to study affective reactions to food, it becomes pivotal to identify the emotional impact of specific food images based on wider samples of individuals. In the present paper we introduce the Open Library of Affective Foods (OLAF), which is a set of original food pictures created to reliably select food pictures based on the emotions they prompt, as indicated by affective ratings of valence, arousal, and dominance and by an additional food craving scale. OLAF images were designed to allow simultaneous use with affective images from the International Affective Picture System (IAPS), which is a well-known instrument to investigate emotional reactions in the laboratory. The ultimate goal of the OLAF is to contribute to understanding how food is emotionally processed in healthy individuals and in patients who suffer from eating and weight-related disorders. The present normative data, which was based on a large sample of an adolescent population, indicate that when viewing affective non-food IAPS images, valence, arousal, and dominance ratings were in line with expected patterns based on previous emotion research. Moreover, when viewing food pictures, affective and food craving ratings were consistent with research on food cue processing. As a whole, the data supported the methodological and theoretical reliability of the OLAF ratings, therefore providing researchers with a standardized tool to reliably investigate the emotional and motivational significance of food. The OLAF database is publicly available at zenodo.org.
Lunar Processing Cabinet 2.0: Retrofitting Gloveboxes into the 21st Century
NASA Technical Reports Server (NTRS)
Calaway, M. J.
2015-01-01
In 2014, the Apollo 16 Lunar Processing Glovebox (cabinet 38) in the Lunar Curation Laboratory at NASA JSC received an upgrade including new technology interfaces. A Jacobs - Technology Innovation Project provided the primary resources to retrofit this glovebox into the 21st century. NASA Astromaterials Acquisition & Curation Office continues the over 40 year heritage of preserving lunar materials for future scientific studies in state-of-the-art facilities. This enhancement has not only modernized the contamination controls, but provides new innovative tools for processing and characterizing lunar samples as well as supports real-time exchange of sample images and information with the scientific community throughout the world.
Lizarraga, Gabriel; Li, Chunfei; Cabrerizo, Mercedes; Barker, Warren; Loewenstein, David A; Duara, Ranjan; Adjouadi, Malek
2018-04-26
Structural and functional brain images are essential imaging modalities for medical experts to study brain anatomy. These images are typically visually inspected by experts. To analyze images without any bias, they must be first converted to numeric values. Many software packages are available to process the images, but they are complex and difficult to use. The software packages are also hardware intensive. The results obtained after processing vary depending on the native operating system used and its associated software libraries; data processed in one system cannot typically be combined with data on another system. The aim of this study was to fulfill the neuroimaging community’s need for a common platform to store, process, explore, and visualize their neuroimaging data and results using Neuroimaging Web Services Interface: a series of processing pipelines designed as a cyber physical system for neuroimaging and clinical data in brain research. Neuroimaging Web Services Interface accepts magnetic resonance imaging, positron emission tomography, diffusion tensor imaging, and functional magnetic resonance imaging. These images are processed using existing and custom software packages. The output is then stored as image files, tabulated files, and MySQL tables. The system, made up of a series of interconnected servers, is password-protected and is securely accessible through a Web interface and allows (1) visualization of results and (2) downloading of tabulated data. All results were obtained using our processing servers in order to maintain data validity and consistency. The design is responsive and scalable. The processing pipeline started from a FreeSurfer reconstruction of Structural magnetic resonance imaging images. The FreeSurfer and regional standardized uptake value ratio calculations were validated using Alzheimer’s Disease Neuroimaging Initiative input images, and the results were posted at the Laboratory of Neuro Imaging data archive. Notable leading researchers in the field of Alzheimer’s Disease and epilepsy have used the interface to access and process the data and visualize the results. Tabulated results with unique visualization mechanisms help guide more informed diagnosis and expert rating, providing a truly unique multimodal imaging platform that combines magnetic resonance imaging, positron emission tomography, diffusion tensor imaging, and resting state functional magnetic resonance imaging. A quality control component was reinforced through expert visual rating involving at least 2 experts. To our knowledge, there is no validated Web-based system offering all the services that Neuroimaging Web Services Interface offers. The intent of Neuroimaging Web Services Interface is to create a tool for clinicians and researchers with keen interest on multimodal neuroimaging. More importantly, Neuroimaging Web Services Interface significantly augments the Alzheimer’s Disease Neuroimaging Initiative data, especially since our data contain a large cohort of Hispanic normal controls and Alzheimer’s Disease patients. The obtained results could be scrutinized visually or through the tabulated forms, informing researchers on subtle changes that characterize the different stages of the disease. ©Gabriel Lizarraga, Chunfei Li, Mercedes Cabrerizo, Warren Barker, David A Loewenstein, Ranjan Duara, Malek Adjouadi. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 26.04.2018.
Molecular imaging with radionuclides, a powerful technique for studying biological processes in vivo
NASA Astrophysics Data System (ADS)
Cisbani, E.; Cusanno, F.; Garibaldi, F.; Magliozzi, M. L.; Majewski, S.; Torrioli, S.; Tsui, B. M. W.
2007-02-01
Our team is carrying on a systematic study devoted to the design of a SPECT detector with submillimeter resolution and adequate sensitivity (1 cps/kBq). Such system will be used for functional imaging of biological processes at molecular level in small animal. The system requirements have been defined by two relevant applications: study of atherosclerotic plaques characterization and stem cells diffusion and homing. In order to minimize costs and implementation time, the gamma detector will be based—as much as possible—on conventional components: scintillator crystal and position sensitive PhotoMultipliers read by individual channel electronics. A coded aperture collimator should be adapted to maximize the efficiency. The optimal selection of the detector components is investigated by systematic use of Monte-Carlo simulations (and laboratory validation tests); and finally preliminary results are presented and discussed here.
SSME leak detection feasibility investigation by utilization of infrared sensor technology
NASA Technical Reports Server (NTRS)
Shohadaee, Ahmad A.; Crawford, Roger A.
1990-01-01
This investigation examined the potential of using state-of-the-art technology of infrared (IR) thermal imaging systems combined with computer, digital image processing and expert systems for Space Shuttle Main Engines (SSME) propellant path peak detection as an early warning system of imminent engine failure. A low-cost, laboratory experiment was devised and an experimental approach was established. The system was installed, checked out, and data were successfully acquired demonstrating the proof-of-concept. The conclusion from this investigation is that both numerical and experimental results indicate that the leak detection by using infrared sensor technology proved to be feasible for a rocket engine health monitoring system.
A survey of current solid state star tracker technology
NASA Astrophysics Data System (ADS)
Armstrong, R. W.; Staley, D. A.
1985-12-01
This paper is a survey of the current state of the art in design of star trackers for spacecraft attitude determination systems. Specific areas discussed are sensor technology, including the current state-of-the-art solid state sensors and techniques of mounting and cooling the sensor, analog image preprocessing electronics performance, and digital processing hardware and software. Three examples of area array solid state star tracker development are presented - ASTROS, developed by the Jet Propulsion Laboratory, the Retroreflector Field Tracker (RFT) by Ball Aerospace, and TRW's MADAN. Finally, a discussion of solid state line arrays explores the possibilities for one-dimensional imagers which offer simplified scan control electronics.
Evaluation of radiometric and geometric characteristics of LANDSAT-D imaging system
NASA Technical Reports Server (NTRS)
Salisbury, J. W.; Podwysocki, M. H.; Bender, L. U.; Rowan, L. C. (Principal Investigator)
1983-01-01
With vegetation masked and noise sources eliminated or minimized, different carbonate facies could be discriminated in a south Florida scene. Laboratory spectra of grab samples indicate that a 20% change in depth of the carbonate absorption band was detected despite the effects of atmospheric absorption. Both bright and dark hydrothermally altered volcanic rocks can be discriminated from their unaltered equivalents. A previously unrecognized altered area was identified on the basis of the TM images. The ability to map desert varnish in semi-arid terrains has economic significance as it defines areas that are less susceptible desert erosional process and suitable for construction development.
NASA Astrophysics Data System (ADS)
Malin, Michal C.; Ravine, Michael A.; Caplinger, Michael A.; Tony Ghaemi, F.; Schaffner, Jacob A.; Maki, Justin N.; Bell, James F.; Cameron, James F.; Dietrich, William E.; Edgett, Kenneth S.; Edwards, Laurence J.; Garvin, James B.; Hallet, Bernard; Herkenhoff, Kenneth E.; Heydari, Ezat; Kah, Linda C.; Lemmon, Mark T.; Minitti, Michelle E.; Olson, Timothy S.; Parker, Timothy J.; Rowland, Scott K.; Schieber, Juergen; Sletten, Ron; Sullivan, Robert J.; Sumner, Dawn Y.; Aileen Yingst, R.; Duston, Brian M.; McNair, Sean; Jensen, Elsa H.
2017-08-01
The Mars Science Laboratory Mast camera and Descent Imager investigations were designed, built, and operated by Malin Space Science Systems of San Diego, CA. They share common electronics and focal plane designs but have different optics. There are two Mastcams of dissimilar focal length. The Mastcam-34 has an f/8, 34 mm focal length lens, and the M-100 an f/10, 100 mm focal length lens. The M-34 field of view is about 20° × 15° with an instantaneous field of view (IFOV) of 218 μrad; the M-100 field of view (FOV) is 6.8° × 5.1° with an IFOV of 74 μrad. The M-34 can focus from 0.5 m to infinity, and the M-100 from 1.6 m to infinity. All three cameras can acquire color images through a Bayer color filter array, and the Mastcams can also acquire images through seven science filters. Images are ≤1600 pixels wide by 1200 pixels tall. The Mastcams, mounted on the 2 m tall Remote Sensing Mast, have a 360° azimuth and 180° elevation field of regard. Mars Descent Imager is fixed-mounted to the bottom left front side of the rover at 66 cm above the surface. Its fixed focus lens is in focus from 2 m to infinity, but out of focus at 66 cm. The f/3 lens has a FOV of 70° by 52° across and along the direction of motion, with an IFOV of 0.76 mrad. All cameras can acquire video at 4 frames/second for full frames or 720p HD at 6 fps. Images can be processed using lossy Joint Photographic Experts Group and predictive lossless compression.
Site Characterization for Radar Experiments
1990-08-01
accomplished waz "New Mine Detection Technologies," Mr. Jack Stoll, Principal Investigator. The Environmental Systems Division (EST) of the Environmental...Mr. Steve Bong of Hilton Systems visiting the proposed study site in M’rch to select specific locations for the test plots. The field data coll in...Technology/Lincoln Laboratory (MIT/LL) described an airborne 35-Ghz radar imaging system . The MIT/LL would employ various kinds of processing on the
Image Chunking: Defining Spatial Building Blocks for Scene Analysis.
1987-04-01
this research with Harry Voorhees, Eric Saund, David Clemens and Anselm Spoerri. In the process these people have become some of my closest friends...I am gratefuil to many other people at the M.I.T. Artificial Intelligence Laboratory for inspiring conversations and/or moral support, especially...V~ % % %~P ’’~* ~ bj Ii The simulation was implemented on the Thinking Machines Corporation Connection Ma- chine [Hillis 851, a single instruction
ERIC Educational Resources Information Center
Moraes, Edgar P.; da Silva, Nilbert S. A.; de Morais, Camilo de L. M.; das Neves, Luiz S.; de Lima, Kassio M. G.
2014-01-01
The flame test is a classical analytical method that is often used to teach students how to identify specific metals. However, some universities in developing countries have difficulties acquiring the sophisticated instrumentation needed to demonstrate how to identify and quantify metals. In this context, a method was developed based on the flame…
Schneider, Florian R; Mann, Alexander B; Konorov, Igor; Delso, Gaspar; Paul, Stephan; Ziegler, Sibylle I
2012-06-01
A one-day laboratory course on positron emission tomography (PET) for the education of physics students and PhD students in medical physics has been set up. In the course, the physical background and the principles of a PET scanner are introduced. Course attendees set the system in operation, calibrate it using a (22)Na point source and reconstruct different source geometries filled with (18)F. The PET scanner features an individual channel read-out of 96 lutetium oxyorthosilicate (LSO) scintillator crystals coupled to avalanche photodiodes (APD). The analog data of each APD are digitized by fast sampling analog to digital converters (SADC) and processed within field programmable gate arrays (FPGA) to extract amplitudes and time stamps. All SADCs are continuously sampling with a precise rate of 80MHz, which is synchronous for the whole system. The data is transmitted via USB to a Linux PC, where further processing and the image reconstruction are performed. The course attendees get an insight into detector techniques, modern read-out electronics, data acquisition and PET image reconstruction. In addition, a short introduction to some common software applications used in particle and high energy physics is part of the course. Copyright © 2011. Published by Elsevier GmbH.
Eye-tracking novice and expert geologist groups in the field and laboratory
NASA Astrophysics Data System (ADS)
Cottrell, R. D.; Evans, K. M.; Jacobs, R. A.; May, B. B.; Pelz, J. B.; Rosen, M. R.; Tarduno, J. A.; Voronov, J.
2010-12-01
We are using an Active Vision approach to learn how novices and expert geologists acquire visual information in the field. The Active Vision approach emphasizes that visual perception is an active process wherein new information is acquired about a particular environment through exploratory eye movements. Eye movements are not only influenced by physical stimuli, but are also strongly influenced by high-level perceptual and cognitive processes. Eye-tracking data were collected on ten novices (undergraduate geology students) and 3 experts during a 10-day field trip across California focused on neotectonics. In addition, high-resolution panoramic images were captured at each key locality for use in a semi-immersive laboratory environment. Examples of each data type will be presented. The number of observers will be increased in subsequent field trips, but expert/novice differences are already apparent in the first set of individual eye-tracking records, including gaze time, gaze pattern and object recognition. We will review efforts to quantify these patterns, and development of semi-immersive environments to display geologic scenes. The research is a collaborative effort between Earth scientists, Cognitive scientists and Imaging scientists at the University of Rochester and the Rochester Institute of Technology and with funding from the National Science Foundation.
NASA Astrophysics Data System (ADS)
Vicent, Jorge; Alonso, Luis; Sabater, Neus; Miesch, Christophe; Kraft, Stefan; Moreno, Jose
2015-09-01
The uncertainties in the knowledge of the Instrument Spectral Response Function (ISRF), barycenter of the spectral channels and bandwidth / spectral sampling (spectral resolution) are important error sources in the processing of satellite imaging spectrometers within narrow atmospheric absorption bands. The exhaustive laboratory spectral characterization is a costly engineering process that differs from the instrument configuration in-flight given the harsh space environment and harmful launching phase. The retrieval schemes at Level-2 commonly assume a Gaussian ISRF, leading to uncorrected spectral stray-light effects and wrong characterization and correction of the spectral shift and smile. These effects produce inaccurate atmospherically corrected data and are propagated to the final Level-2 mission products. Within ESA's FLEX satellite mission activities, the impact of the ISRF knowledge error and spectral calibration at Level-1 products and its propagation to Level-2 retrieved chlorophyll fluorescence has been analyzed. A spectral recalibration scheme has been implemented at Level-2 reducing the errors in Level-1 products below the 10% error in retrieved fluorescence within the oxygen absorption bands enhancing the quality of the retrieved products. The work presented here shows how the minimization of the spectral calibration errors requires an effort both for the laboratory characterization and for the implementation of specific algorithms at Level-2.
[Safety management in pathology laboratory: from specimen handling to confirmation of reports].
Minato, Hiroshi; Nojima, Takayuki; Nakano, Mariko; Yamazaki, Michiko
2011-03-01
Medical errors in pathological diagnosis give a huge amount of physical and psychological damage to patients as well as medical staffs. We discussed here how to avoid medical errors in surgical pathology laboratory through our experience. Handling of surgical specimens and diagnosing process requires intensive labor and involves many steps. Each hospital reports many kinds of accidents or incidents, however, many laboratories share common problems and each process has its specific risk for the certain error. We analyzed the problems in each process and concentrated on avoiding misaccessioning, mislabeling, and misreporting. We have made several changes in our system, such as barcode labels, digital images of all specimens, putting specimens in embedding cassettes directly on the endoscopic biopsied specimens, and using a multitissue control block as controls in immunohistochemistry. Some problems are still left behind, but we have reduced the errors by decreasing the number of artificial operation as much as possible. A pathological system recognizing the status of read or unread the pathological reports by clinician are now underconstruction. We also discussed about quality assurance of diagnosis, cooperation with clinicians and other comedical staffs, and organization and method. In order to operate riskless work, it is important for all the medical staffs to have common awareness of the problems, keeping careful observations, and sharing all the information in common. Incorporation of an organizational management tool such as ISO 15189 and utilizing PDCA cycle is also helpful for safety management and quality improvement of the laboratory.
STS-35 Astronomy Laboratory 1 (ASTRO-1) in OV-102's payload bay at KSC
1990-03-20
STS-35 Astronomy Laboratory 1 (ASTRO-1) is installed in Columbia's, Orbiter Vehicle (OV) 102's, payload bay (PLB) at the Kennedy Space Center (KSC) Orbiter Processing Facility (OPF). On the left, in the aft PLB is the Broad Band X Ray Telescope (BBXRT) mounted on the two axis pointing system (TAPS). In the center, the three ultraviolet telescopes - Wisconsin Ultraviolet Photo-Polarimeter Experiment (WUPPE), the Hopkins Ultraviolet Telescope (HUT), and the Ultraviolet Imaging Telescope (UIT) - are mounted on the instrument pointing system (IPS) and are in stowed position. At the far right is the Spacelab Pallet System (SPS) igloo. View provided by KSC with alternate number KSSC-90PC-421.
MA_MISS and terrestrial analogues for Mars
NASA Astrophysics Data System (ADS)
De Sanctis, M. C.; De Angelis, S.; Ammannito, E.; Di Iorio, T.; Carli, C.; Frigeri, A.; Boccaccini, A.; Battistelli, E.; Mugnolo, R.; MA MISS Team
2012-09-01
The MA_MISS instrument (Mars Multispectral Imager for Subsurface Studies) is a VIS-NIR spectrometer devoted to study the Martian subsoil within the ExoMars mission. This miniaturized spectrometer is integrated in drilling system of the ExoMars Pasteur Rover, and will investigate the Martian subsoil down to 2 m, in the spectral range 0.4 - 2.2 μm [1,2]. It will provide important information regarding the composition and mineralogy of the Martian subsoil, whose materials are expected to be less altered by erosion and other exogenous processes than surface rocks. With a view to doing laboratory spectroscopic measurements with the instrument breadboard, we performed preliminary laboratory measurements on Mars analogues using a spectrophotometer coupled with a goniometer.
On-board landmark navigation and attitude reference parallel processor system
NASA Technical Reports Server (NTRS)
Gilbert, L. E.; Mahajan, D. T.
1978-01-01
An approach to autonomous navigation and attitude reference for earth observing spacecraft is described along with the landmark identification technique based on a sequential similarity detection algorithm (SSDA). Laboratory experiments undertaken to determine if better than one pixel accuracy in registration can be achieved consistent with onboard processor timing and capacity constraints are included. The SSDA is implemented using a multi-microprocessor system including synchronization logic and chip library. The data is processed in parallel stages, effectively reducing the time to match the small known image within a larger image as seen by the onboard image system. Shared memory is incorporated in the system to help communicate intermediate results among microprocessors. The functions include finding mean values and summation of absolute differences over the image search area. The hardware is a low power, compact unit suitable to onboard application with the flexibility to provide for different parameters depending upon the environment.
Hawkins, Liam J; Storey, Kenneth B
2017-01-01
Common Western-blot imaging systems have previously been adapted to measure signals from luminescent microplate assays. This can be a cost saving measure as Western-blot imaging systems are common laboratory equipment and could substitute a dedicated luminometer if one is not otherwise available. One previously unrecognized limitation is that the signals captured by the cameras in these systems are not equal for all wells. Signals are dependent on the angle of incidence to the camera, and thus the location of the well on the microplate. Here we show that: •The position of a well on a microplate significantly affects the signal captured by a common Western-blot imaging system from a luminescent assay.•The effect of well position can easily be corrected for.•This method can be applied to commercially available luminescent assays, allowing for high-throughput quantification of a wide range of biological processes and biochemical reactions.
An acquisition system for CMOS imagers with a genuine 10 Gbit/s bandwidth
NASA Astrophysics Data System (ADS)
Guérin, C.; Mahroug, J.; Tromeur, W.; Houles, J.; Calabria, P.; Barbier, R.
2012-12-01
This paper presents a high data throughput acquisition system for pixel detector readout such as CMOS imagers. This CMOS acquisition board offers a genuine 10 Gbit/s bandwidth to the workstation and can provide an on-line and continuous high frame rate imaging capability. On-line processing can be implemented either on the Data Acquisition Board or on the multi-cores workstation depending on the complexity of the algorithms. The different parts composing the acquisition board have been designed to be used first with a single-photon detector called LUSIPHER (800×800 pixels), developed in our laboratory for scientific applications ranging from nano-photonics to adaptive optics. The architecture of the acquisition board is presented and the performances achieved by the produced boards are described. The future developments (hardware and software) concerning the on-line implementation of algorithms dedicated to single-photon imaging are tackled.
2001-01-01
The high-tech art of digital signal processing (DSP) was pioneered at NASA's Jet Propulsion Laboratory (JPL) in the mid-1960s for use in the Apollo Lunar Landing Program. Designed to computer enhance pictures of the Moon, this technology became the basis for the Landsat Earth resources satellites and subsequently has been incorporated into a broad range of Earthbound medical and diagnostic tools. DSP is employed in advanced body imaging techniques including Computer-Aided Tomography, also known as CT and CATScan, and Magnetic Resonance Imaging (MRI). CT images are collected by irradiating a thin slice of the body with a fan-shaped x-ray beam from a number of directions around the body's perimeter. A tomographic (slice-like) picture is reconstructed from these multiple views by a computer. MRI employs a magnetic field and radio waves, rather than x-rays, to create images. In this photograph, a patient undergoes an open MRI.
Voyager 2 Jupiter Eruption Movie
NASA Technical Reports Server (NTRS)
2000-01-01
This movie records an eruptive event in the southern hemisphere of Jupiter over a period of 8 Jupiter days. Prior to the event, an undistinguished oval cloud mass cruised through the turbulent atmosphere. The eruption occurs over avery short time at the very center of the cloud. The white eruptive material is swirled about by the internal wind patterns of the cloud. As a result of the eruption, the cloud then becomes a type of feature seen elsewhere on Jupiter known as 'spaghetti bowls'.
As Voyager 2 approached Jupiter in 1979, it took images of the planet at regular intervals. This sequence is made from 8 images taken once every Jupiter rotation period (about 10 hours). These images were acquired in the Violet filter around May 6, 1979. The spacecraft was about 50 million kilometers from Jupiter at that time.This time-lapse movie was produced at JPL by the Image Processing Laboratory in 1979.Regularization destriping of remote sensing imagery
NASA Astrophysics Data System (ADS)
Basnayake, Ranil; Bollt, Erik; Tufillaro, Nicholas; Sun, Jie; Gierach, Michelle
2017-07-01
We illustrate the utility of variational destriping for ocean color images from both multispectral and hyperspectral sensors. In particular, we examine data from a filter spectrometer, the Visible Infrared Imaging Radiometer Suite (VIIRS) on the Suomi National Polar Partnership (NPP) orbiter, and an airborne grating spectrometer, the Jet Population Laboratory's (JPL) hyperspectral Portable Remote Imaging Spectrometer (PRISM) sensor. We solve the destriping problem using a variational regularization method by giving weights spatially to preserve the other features of the image during the destriping process. The target functional penalizes the neighborhood of stripes
(strictly, directionally uniform features) while promoting data fidelity, and the functional is minimized by solving the Euler-Lagrange equations with an explicit finite-difference scheme. We show the accuracy of our method from a benchmark data set which represents the sea surface temperature off the coast of Oregon, USA. Technical details, such as how to impose continuity across data gaps using inpainting, are also described.
NASA Astrophysics Data System (ADS)
Riggs, A. J. Eldorado; Cady, Eric J.; Prada, Camilo M.; Kern, Brian D.; Zhou, Hanying; Kasdin, N. Jeremy; Groff, Tyler D.
2016-07-01
For direct imaging and spectral characterization of cold exoplanets in reflected light, the proposed Wide-Field Infrared Survey Telescope (WFIRST) Coronagraph Instrument (CGI) will carry two types of coronagraphs. The High Contrast Imaging Testbed (HCIT) at the Jet Propulsion Laboratory has been testing both coronagraph types and demonstrated their abilities to achieve high contrast. Focal plane wavefront correction is used to estimate and mitigate aberrations. As the most time-consuming part of correction during a space mission, the acquisition of probed images for electric field estimation needs to be as short as possible. We present results from the HCIT of narrowband, low-signal wavefront estimation tests using a shaped pupil Lyot coronagraph (SPLC) designed for the WFIRST CGI. In the low-flux regime, the Kalman filter and iterated extended Kalman filter provide faster correction, better achievable contrast, and more accurate estimates than batch process estimation.
NASA Astrophysics Data System (ADS)
Flores, Jorge L.; García-Torales, G.; Ponce Ávila, Cristina
2006-08-01
This paper describes an in situ image recognition system designed to inspect the quality standards of the chocolate pops during their production. The essence of the recognition system is the localization of the events (i.e., defects) in the input images that affect the quality standards of pops. To this end, processing modules, based on correlation filter, and segmentation of images are employed with the objective of measuring the quality standards. Therefore, we designed the correlation filter and defined a set of features from the correlation plane. The desired values for these parameters are obtained by exploiting information about objects to be rejected in order to find the optimal discrimination capability of the system. Regarding this set of features, the pop can be correctly classified. The efficacy of the system has been tested thoroughly under laboratory conditions using at least 50 images, containing 3 different types of possible defects.
Quantitative fluorescence microscopy and image deconvolution.
Swedlow, Jason R
2013-01-01
Quantitative imaging and image deconvolution have become standard techniques for the modern cell biologist because they can form the basis of an increasing number of assays for molecular function in a cellular context. There are two major types of deconvolution approaches--deblurring and restoration algorithms. Deblurring algorithms remove blur but treat a series of optical sections as individual two-dimensional entities and therefore sometimes mishandle blurred light. Restoration algorithms determine an object that, when convolved with the point-spread function of the microscope, could produce the image data. The advantages and disadvantages of these methods are discussed in this chapter. Image deconvolution in fluorescence microscopy has usually been applied to high-resolution imaging to improve contrast and thus detect small, dim objects that might otherwise be obscured. Their proper use demands some consideration of the imaging hardware, the acquisition process, fundamental aspects of photon detection, and image processing. This can prove daunting for some cell biologists, but the power of these techniques has been proven many times in the works cited in the chapter and elsewhere. Their usage is now well defined, so they can be incorporated into the capabilities of most laboratories. A major application of fluorescence microscopy is the quantitative measurement of the localization, dynamics, and interactions of cellular factors. The introduction of green fluorescent protein and its spectral variants has led to a significant increase in the use of fluorescence microscopy as a quantitative assay system. For quantitative imaging assays, it is critical to consider the nature of the image-acquisition system and to validate its response to known standards. Any image-processing algorithms used before quantitative analysis should preserve the relative signal levels in different parts of the image. A very common image-processing algorithm, image deconvolution, is used to remove blurred signal from an image. There are two major types of deconvolution approaches, deblurring and restoration algorithms. Deblurring algorithms remove blur, but treat a series of optical sections as individual two-dimensional entities, and therefore sometimes mishandle blurred light. Restoration algorithms determine an object that, when convolved with the point-spread function of the microscope, could produce the image data. The advantages and disadvantages of these methods are discussed. Copyright © 1998 Elsevier Inc. All rights reserved.
Visualizing individual microtubules by bright field microscopy
NASA Astrophysics Data System (ADS)
Gutiérrez-Medina, Braulio; Block, Steven M.
2010-11-01
Microtubules are slender (˜25 nm diameter), filamentous polymers involved in cellular structure and organization. Individual microtubules have been visualized via fluorescence imaging of dye-labeled tubulin subunits and by video-enhanced, differential interference-contrast microscopy of unlabeled polymers using sensitive CCD cameras. We demonstrate the imaging of unstained microtubules using a microscope with conventional bright field optics in conjunction with a webcam-type camera and a light-emitting diode illuminator. The light scattered by microtubules is image-processed to remove the background, reduce noise, and enhance contrast. The setup is based on a commercial microscope with a minimal set of inexpensive components, suitable for implementation in a student laboratory. We show how this approach can be used in a demonstration motility assay, tracking the gliding motions of microtubules driven by the motor protein kinesin.
Unsupervised color normalisation for H and E stained histopathology image analysis
NASA Astrophysics Data System (ADS)
Celis, Raúl; Romero, Eduardo
2015-12-01
In histology, each dye component attempts to specifically characterise different microscopic structures. In the case of the Hematoxylin-Eosin (H&E) stain, universally used for routine examination, quantitative analysis may often require the inspection of different morphological signatures related mainly to nuclei patterns, but also to stroma distribution. Nevertheless, computer systems for automatic diagnosis are often fraught by color variations ranging from the capturing device to the laboratory specific staining protocol and stains. This paper presents a novel colour normalisation method for H&E stained histopathology images. This method is based upon the opponent process theory and blindly estimates the best color basis for the Hematoxylin and Eosin stains without relying on prior knowledge. Stain Normalisation and Color Separation are transversal to any Framework of Histopathology Image Analysis.
Virtual dissection of Thoropa miliaris tadpole using phase-contrast synchrotron microtomography
NASA Astrophysics Data System (ADS)
Fidalgo, G.; Colaço, M. V.; Nogueira, L. P.; Braz, D.; Silva, H. R.; Colaço, G.; Barroso, R. C.
2018-05-01
In this work, in-line phase-contrast synchrotron microtomography was used in order to study the external and internal morphology of Thoropa miliaris tadpoles. Whole-specimens of T. miliaris in larval stages of development 28, 37 and 42, collected in the municipality of Mangaratiba (Rio de Janeiro, Brazil) were used for the study. The samples were scanned in microtomography beamline (IMX) at the Brazilian Synchrotron Light Laboratory (LNLS). The phase-contrast technique allowed us to obtain high quality images which made possible the structures segmentation on the rendered volume by the Avizo graphic image editing software. The combination of high quality images and segmentation process provides adequate visualization of different organs and soft (liver, notochord, brain, crystalline, cartilages) and hard (elements of the bone skeleton) tissues.
Magnetic resonance imaging of tablet dissolution.
Nott, Kevin P
2010-01-01
Magnetic resonance imaging (MRI) is the technique of choice for measuring hydration, and its effects, during dissolution of tablets since it non-invasively maps (1)H nuclei associated with 'mobile' water. Although most studies have used MRI systems with high-field superconducting magnets, low-field laboratory-based instruments based on permanent magnet technology are being developed that provide key data for the formulation scientist. Incorporation of dissolution hardware, in particular the United States Pharmacopeia (USP) apparatus 4 flow-through cell, allows measurements under controlled conditions for comparison against other dissolution methods. Furthermore, simultaneous image acquisition and measurement of drug concentration allow direct comparison of the drug release throughout the hydration process. The combination of low-field MRI with USP-4 apparatus provides another tool to aid tablet formulation. Copyright 2009 Elsevier B.V. All rights reserved.
Study of carbonate concretions using imaging spectroscopy in the Frontier Formation, Wyoming
NASA Astrophysics Data System (ADS)
de Linaje, Virginia Alonso; Khan, Shuhab D.; Bhattacharya, Janok
2018-04-01
Imaging spectroscopy is applied to study diagenetic processes of the Wall Creek Member of the Cretaceous Frontier Formation, Wyoming. Visible Near-Infrared and Shortwave-Infrared hyperspectral cameras were used to scan near vertical and well-exposed outcrop walls to analyze lateral and vertical geochemical variations. Reflectance spectra were analyzed and compared with high-resolution laboratory spectral and hyperspectral imaging data. Spectral Angle Mapper (SAM) and Mixture Tuned Matched Filtering (MTMF) classification algorithms were applied to quantify facies and mineral abundances in the Frontier Formation. MTMF is the most effective and reliable technique when studying spectrally similar materials. Classification results show that calcite cement in concretions associated with the channel facies is homogeneously distributed, whereas the bar facies was shown to be interbedded with layers of non-calcite-cemented sandstone.
Constructing a modern cytology laboratory: A toolkit for planning and design.
Roberson, Janie; Wrenn, Allison; Poole, John; Jaeger, Andrew; Eltoum, Isam A
2013-01-01
Constructing or renovating a laboratory can be both challenging and rewarding. UAB Cytology (UAB CY) recently undertook a project to relocate from a building constructed in 1928 to new space. UAB CY is part of an academic center that provides service to a large set of patients, support training of one cytotechnology program and one cytopathology fellowship training program and involve actively in research and scholarly activity. Our objectives were to provide a safe, aesthetically pleasing space and gain efficiencies through lean processes. The phases of any laboratory design project are Planning, Schematic Design (SD), Design Development (DD), Construction Documents (CD) and Construction. Lab personnel are most critical in the Planning phase. During this time stakeholders, relationships, budget, square footage and equipment were identified. Equipment lists, including what would be relocated, purchased new and projected for future growth ensure that utilities were matched to expected need. A chemical inventory was prepared and adequate storage space was planned. Regulatory and safety requirements were discussed. Tours and high level process flow diagrams helped architects and engineers understand the laboratory daily work. Future needs were addressed through a questionnaire which identified potential areas of growth and technological change. Throughout the project, decisions were driven by data from the planning phase. During the SD phase, objective information from the first phase was used by architects and planners to create a general floor plan. This was the basis of a series of meetings to brainstorm and suggest modifications. DD brings more detail to the plans with engineering, casework, equipment specifics, finishes. Design changes should be completed at this phase. The next phase, CD took the project from the lab purview into purely technical mode. Construction documents were used by the contractor for the bidding process and ultimately the Construction phase. The project fitted out a total of 9,000 square feet; 4,000 laboratory and 5,000 office/support. Lab space includes areas for Prep, CT screening, sign out and Imaging. Adjacent space houses faculty offices and conferencing facilities. Transportation time was reduced (waste removal) by a Pneumatic Tube System, specimen drop window to Prep Lab and a pass thru window to the screening area. Open screening and prep areas allow visual management control. Efficiencies were gained by ergonomically placing CT Manual and Imaging microscopes and computers in close proximity, also facilitating a paperless workflow for additional savings. Logistically, closer proximity to Surgical Pathology maximized the natural synergies between the areas. Lab construction should be a systematic process based on sound principles for safety, high quality testing, and finance. Our detailed planning and design process can be a model for others undertaking similar projects.
Constructing a modern cytology laboratory: A toolkit for planning and design
Roberson, Janie; Wrenn, Allison; Poole, John; Jaeger, Andrew; Eltoum, Isam A.
2013-01-01
Introduction: Constructing or renovating a laboratory can be both challenging and rewarding. UAB Cytology (UAB CY) recently undertook a project to relocate from a building constructed in 1928 to new space. UAB CY is part of an academic center that provides service to a large set of patients, support training of one cytotechnology program and one cytopathology fellowship training program and involve actively in research and scholarly activity. Our objectives were to provide a safe, aesthetically pleasing space and gain efficiencies through lean processes. Methods: The phases of any laboratory design project are Planning, Schematic Design (SD), Design Development (DD), Construction Documents (CD) and Construction. Lab personnel are most critical in the Planning phase. During this time stakeholders, relationships, budget, square footage and equipment were identified. Equipment lists, including what would be relocated, purchased new and projected for future growth ensure that utilities were matched to expected need. A chemical inventory was prepared and adequate storage space was planned. Regulatory and safety requirements were discussed. Tours and high level process flow diagrams helped architects and engineers understand the laboratory daily work. Future needs were addressed through a questionnaire which identified potential areas of growth and technological change. Throughout the project, decisions were driven by data from the planning phase. During the SD phase, objective information from the first phase was used by architects and planners to create a general floor plan. This was the basis of a series of meetings to brainstorm and suggest modifications. DD brings more detail to the plans with engineering, casework, equipment specifics, finishes. Design changes should be completed at this phase. The next phase, CD took the project from the lab purview into purely technical mode. Construction documents were used by the contractor for the bidding process and ultimately the Construction phase. Results: The project fitted out a total of 9,000 square feet; 4,000 laboratory and 5,000 office/support. Lab space includes areas for Prep, CT screening, sign out and Imaging. Adjacent space houses faculty offices and conferencing facilities. Transportation time was reduced (waste removal) by a Pneumatic Tube System, specimen drop window to Prep Lab and a pass thru window to the screening area. Open screening and prep areas allow visual management control. Efficiencies were gained by ergonomically placing CT Manual and Imaging microscopes and computers in close proximity, also facilitating a paperless workflow for additional savings. Logistically, closer proximity to Surgical Pathology maximized the natural synergies between the areas. Conclusions: Lab construction should be a systematic process based on sound principles for safety, high quality testing, and finance. Our detailed planning and design process can be a model for others undertaking similar projects PMID:23599722
Omega-3 chicken egg detection system using a mobile-based image processing segmentation method
NASA Astrophysics Data System (ADS)
Nurhayati, Oky Dwi; Kurniawan Teguh, M.; Cintya Amalia, P.
2017-02-01
An Omega-3 chicken egg is a chicken egg produced through food engineering technology. It is produced by hen fed with high omega-3 fatty acids. So, it has fifteen times nutrient content of omega-3 higher than Leghorn's. Visually, its shell has the same shape and colour as Leghorn's. Each egg can be distinguished by breaking the egg's shell and testing the egg yolk's nutrient content in a laboratory. But, those methods were proven not effective and efficient. Observing this problem, the purpose of this research is to make an application to detect the type of omega-3 chicken egg by using a mobile-based computer vision. This application was built in OpenCV computer vision library to support Android Operating System. This experiment required some chicken egg images taken using an egg candling box. We used 60 omega-3 chicken and Leghorn eggs as samples. Then, using an Android smartphone, image acquisition of the egg was obtained. After that, we applied several steps using image processing methods such as Grab Cut, convert RGB image to eight bit grayscale, median filter, P-Tile segmentation, and morphology technique in this research. The next steps were feature extraction which was used to extract feature values via mean, variance, skewness, and kurtosis from each image. Finally, using digital image measurement, some chicken egg images were classified. The result showed that omega-3 chicken egg and Leghorn egg had different values. This system is able to provide accurate reading around of 91%.
BOREAS RSS-14 Level-2 GOES-7 Shortwave and Longwave Radiation Images
NASA Technical Reports Server (NTRS)
Hall, Forrest G. (Editor); Nickeson, Jaime (Editor); Gu, Jiujing; Smith, Eric A.
2000-01-01
The BOREAS RSS-14 team collected and processed several GOES-7 and GOES-8 image data sets that covered the BOREAS study region. This data set contains images of shortwave and longwave radiation at the surface and top of the atmosphere derived from collected GOES-7 data. The data cover the time period of 05-Feb-1994 to 20-Sep-1994. The images missing from the temporal series were zero-filled to create a consistent sequence of files. The data are stored in binary image format files. Due to the large size of the images, the level-1a GOES-7 data are not contained on the BOREAS CD-ROM set. An inventory listing file is supplied on the CD-ROM to inform users of what data were collected. The level-1a GOES-7 image data are available from the Earth Observing System Data and Information System (EOSDIS) Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC). See sections 15 and 16 for more information. The data files are available on a CD-ROM (see document number 20010000884).
Phoenix's Wet Chemistry Laboratory Units
NASA Technical Reports Server (NTRS)
2008-01-01
This image shows four Wet Chemistry Laboratory units, part of the Microscopy, Electrochemistry, and Conductivity Analyzer (MECA) instrument on board NASA's Phoenix Mars Lander. This image was taken before Phoenix's launch on August 4, 2007. The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.Color management in textile application
NASA Astrophysics Data System (ADS)
De Lucia, Maurizio; Vannucci, Massimiliano; Buonopane, Massimo; Fabroni, Cosimo; Fabrini, Francesco
2002-03-01
The aim of this research was to study a system of acquisition and processing of images capable of confronting colored wool with a reference specimen, in order to define the conformity using objective parameters. The first step of the research was to comprise and to analyze in depth the problem: there has been numerous implications of technical, physical, cultural, biological and also psychological character, that come down from the attempt of giving a quantitative appraisal to the color. In the scene of the national and international scientific and technological research, little has been made as regards measurement of color through digital processing of the images through linear CCD. The reason is fundamentally of technological nature: only during the last years we found the presence on the market of low cost equipment capable of acquiring and processing images with adequate performances and qualities. The job described has permitted to create a first prototype of system for the color measuring with use of CCD linear devices. -Hardware identification to carry out a series of tests and experiments in laboratory. -Verification of such device in a textile facility. -Statistics analysis of the collected data and of the employed models.
Challenges in Small Screening Laboratories: SaaS to the rescue
Lemmon, Vance P.; Jia, Yuanyuan; Shi, Yan; Holbrook, S. Douglas; Bixby, John L; Buchser, William
2012-01-01
The Miami Project to Cure Paralysis, part of the University of Miami Miller School of Medicine, includes a laboratory devoted to High Content Analysis (HCA) of neurons. The goal of the laboratory is to uncover signalling pathways, genes, compounds, or drugs that can be used to promote nerve growth. HCA permits the quantification of neuronal morphology, including the lengths and numbers of axons. HCA screening of various libraries on primary neurons requires a team-based approach, a variety of process steps and complex manipulations of cells and libraries to obtain meaningful results. HCA itself produces vast amounts of information including images, well-based data and cell-based phenotypic measures. Managing experimental workflow and library data, along with the extensive amount of experimental results is challenging. For academic laboratories generating large data sets from experiments using thousands of perturbagens, a laboratory information management system (LIMS) is the data tracking solution of choice. With both productivity and efficiency as driving rationales, the Miami Project has equipped its HCA laboratory with a Software As A Service (SAAS) LIMS to ensure the quality of its experiments and workflows. The article discusses this application in detail, and how the system was selected and integrated into the laboratory. The advantages of SaaS are described. PMID:21631415
Development of a miRNA-based diagnostic assay for pancreatic ductal adenocarcinoma.
Szafranska-Schwarzbach, Anna E; Adai, Alex T; Lee, Linda S; Conwell, Darwin L; Andruss, Bernard F
2011-04-01
Diagnosis of pancreatic cancer remains a clinical challenge. Both chronic pancreatitis and pancreatic cancer may present with similar symptoms and similar imaging features, often leading to incorrect interpretation. Thus, the use of an objective molecular test that can discriminate between chronic pancreatitis and pancreatic cancer will be a valuable asset in obtaining a definitive diagnosis of pancreatic cancer. Following Clinical Laboratory Improvement Amendments and College of American Pathologists guidelines, Asuragen Clinical Services Laboratory has developed and validated a laboratory-developed test, miRInform(®) Pancreas, to aid in the identification of pancreatic ductal adenocarcinoma. This molecular diagnostic tool uses reverse-transcription quantitative PCR to measure the expression difference between two miRNAs, miR-196a and miR-217, in fixed tissue specimens. This article describes the test validation process as well as determination of performance parameters of miRInform Pancreas.
Wide Field Collimator 2 (WFC2) for GOES Imager and Sounder
NASA Technical Reports Server (NTRS)
Etemad, Shahriar; Bremer, James C.; Zukowski, Barbara J.; Pasquale, Bert A.; zukowski, Tmitri J.; Prince, Robert E.; O'Neill, Patrick A.; Ross, Robert W.
2004-01-01
Two of the GOES instruments, the Imager and the Sounder, perform scans of the Earth to provide a full disc picture of the Earth. To verify the entire scan process, an image of a target that covers an 18 deg. circular field-of-view is collimated and projected into the field of regard of each instrument. The Wide Field Collimator 2 (WFC2) has many advantages over its predecessor, WFC1, including lower thermal dissipation higher fir field MTF, smaller package, and a more intuitive (faster) focusing process. The illumination source is an LED array that emits in a narrow spectral band centered at 689 nm, within the visible spectral bands of the Imager and Sounder. The illumination level can be continuously adjusted electronically. Lower thermal dissipation eliminates the need for forced convection cooling and minimizes time to reach thermal stability. The lens system has been optimized for the illumination source spectral output and athernalized to remain in focus during bulk temperature changes within the laboratory environment. The MTF of the lens is higher than that of the WFC1 at the edge of FOV. The target is focused in three orthogonal motions, controlled by an ergonomic system that saves substantial time and produces a sharper focus. Key words: Collimator, GOES, Imager, Sounder, Projector
Nanometer-scale imaging and pore-scale fluid flow modeling inchalk
DOE Office of Scientific and Technical Information (OSTI.GOV)
Tomutsa, Liviu; Silin, Dmitriy; Radmilovich, Velimir
2005-08-23
For many rocks of high economic interest such as chalk,diatomite, tight gas sands or coal, nanometer scale resolution is neededto resolve the 3D-pore structure, which controls the flow and trapping offluids in the rocks. Such resolutions cannot be achieved with existingtomographic technologies. A new 3D imaging method, based on serialsectioning and using the Focused Ion Beam (FIB) technology has beendeveloped. FIB allows for the milling of layers as thin as 10 nanometersby using accelerated Ga+ ions to sputter atoms from the sample surface.After each milling step, as a new surface is exposed, a 2D image of thissurface is generated. Next,more » the 2D images are stacked to reconstruct the3D pore or grain structure. Resolutions as high as 10 nm are achievableusing this technique. A new image processing method uses directmorphological analysis of the pore space to characterize thepetrophysical properties of diverse formations. In addition to estimationof the petrophysical properties (porosity, permeability, relativepermeability and capillary pressures), the method is used for simulationof fluid displacement processes, such as those encountered in variousimproved oil recovery (IOR) approaches. Computed with the new methodcapillary pressure curves are in good agreement with laboratory data. Themethod has also been applied for visualization of the fluid distributionat various saturations from the new FIB data.« less
Lausch, Angela; Pause, Marion; Merbach, Ines; Zacharias, Steffen; Doktor, Daniel; Volk, Martin; Seppelt, Ralf
2013-02-01
Remote sensing is an important tool for studying patterns in surface processes on different spatiotemporal scales. However, differences in the spatiospectral and temporal resolution of remote sensing data as well as sensor-specific surveying characteristics very often hinder comparative analyses and effective up- and downscaling analyses. This paper presents a new methodical framework for combining hyperspectral remote sensing data on different spatial and temporal scales. We demonstrate the potential of using the "One Sensor at Different Scales" (OSADIS) approach for the laboratory (plot), field (local), and landscape (regional) scales. By implementing the OSADIS approach, we are able (1) to develop suitable stress-controlled vegetation indices for selected variables such as the Leaf Area Index (LAI), chlorophyll, photosynthesis, water content, nutrient content, etc. over a whole vegetation period. Focused laboratory monitoring can help to document additive and counteractive factors and processes of the vegetation and to correctly interpret their spectral response; (2) to transfer the models obtained to the landscape level; (3) to record imaging hyperspectral information on different spatial scales, achieving a true comparison of the structure and process results; (4) to minimize existing errors from geometrical, spectral, and temporal effects due to sensor- and time-specific differences; and (5) to carry out a realistic top- and downscaling by determining scale-dependent correction factors and transfer functions. The first results of OSADIS experiments are provided by controlled whole vegetation experiments on barley under water stress on the plot scale to model LAI using the vegetation indices Normalized Difference Vegetation Index (NDVI) and green NDVI (GNDVI). The regression model ascertained from imaging hyperspectral AISA-EAGLE/HAWK (DUAL) data was used to model LAI. This was done by using the vegetation index GNDVI with an R (2) of 0.83, which was transferred to airborne hyperspectral data on the local and regional scales. For this purpose, hyperspectral imagery was collected at three altitudes over a land cover gradient of 25 km within a timeframe of a few minutes, yielding a spatial resolution from 1 to 3 m. For all recorded spatial scales, both the LAI and the NDVI were determined. The spatial properties of LAI and NDVI of all recorded hyperspectral images were compared using semivariance metrics derived from the variogram. The first results show spatial differences in the heterogeneity of LAI and NDVI from 1 to 3 m with the recorded hyperspectral data. That means that differently recorded data on different scales might not sufficiently maintain the spatial properties of high spatial resolution hyperspectral images.
Kelley, Laura C.; Wang, Zheng; Hagedorn, Elliott J.; Wang, Lin; Shen, Wanqing; Lei, Shijun; Johnson, Sam A.; Sherwood, David R.
2018-01-01
Cell invasion through basement membrane (BM) barriers is crucial during development, leukocyte trafficking, and for the spread of cancer. Despite its importance in normal and diseased states, the mechanisms that direct invasion are poorly understood, in large part because of the inability to visualize dynamic cell-basement membrane interactions in vivo. This protocol describes multi-channel time-lapse confocal imaging of anchor cell invasion in live C. elegans. Methods presented include outline slide preparation and worm growth synchronization (15 min), mounting (20 min), image acquisition (20-180 min), image processing (20 min), and quantitative analysis (variable timing). Images acquired enable direct measurement of invasive dynamics including invadopodia formation, cell membrane protrusions, and BM removal. This protocol can be combined with genetic analysis, molecular activity probes, and optogenetic approaches to uncover molecular mechanisms underlying cell invasion. These methods can also be readily adapted for real-time analysis of cell migration, basement membrane turnover, and cell membrane dynamics by any worm laboratory. PMID:28880279
Image Acquisition in Real Time
NASA Technical Reports Server (NTRS)
2003-01-01
In 1995, Carlos Jorquera left NASA s Jet Propulsion Laboratory (JPL) to focus on erasing the growing void between high-performance cameras and the requisite software to capture and process the resulting digital images. Since his departure from NASA, Jorquera s efforts have not only satisfied the private industry's cravings for faster, more flexible, and more favorable software applications, but have blossomed into a successful entrepreneurship that is making its mark with improvements in fields such as medicine, weather forecasting, and X-ray inspection. Formerly a JPL engineer who constructed imaging systems for spacecraft and ground-based astronomy projects, Jorquera is the founder and president of the three-person firm, Boulder Imaging Inc., based in Louisville, Colorado. Joining Jorquera to round out the Boulder Imaging staff are Chief Operations Engineer Susan Downey, who also gained experience at JPL working on space-bound projects including Galileo and the Hubble Space Telescope, and Vice President of Engineering and Machine Vision Specialist Jie Zhu Kulbida, who has extensive industrial and research and development experience within the private sector.
NASA Astrophysics Data System (ADS)
Retherford, Kurt D.; Bai, Yibin; Ryu, Kevin K.; Gregory, James A.; Welander, Paul B.; Davis, Michael W.; Greathouse, Thomas K.; Winters, Gregory S.; Suntharalingam, Vyshnavi; Beletic, James W.
2015-10-01
We report our progress toward optimizing backside-illuminated silicon P-type intrinsic N-type complementary metal oxide semiconductor devices developed by Teledyne Imaging Sensors (TIS) for far-ultraviolet (UV) planetary science applications. This project was motivated by initial measurements at Southwest Research Institute of the far-UV responsivity of backside-illuminated silicon PIN photodiode test structures, which revealed a promising QE in the 100 to 200 nm range. Our effort to advance the capabilities of thinned silicon wafers capitalizes on recent innovations in molecular beam epitaxy (MBE) doping processes. Key achievements to date include the following: (1) representative silicon test wafers were fabricated by TIS, and set up for MBE processing at MIT Lincoln Laboratory; (2) preliminary far-UV detector QE simulation runs were completed to aid MBE layer design; (3) detector fabrication was completed through the pre-MBE step; and (4) initial testing of the MBE doping process was performed on monitoring wafers, with detailed quality assessments.
Geometry Processing of Conventionally Produced Mouse Brain Slice Images.
Agarwal, Nitin; Xu, Xiangmin; Gopi, M
2018-04-21
Brain mapping research in most neuroanatomical laboratories relies on conventional processing techniques, which often introduce histological artifacts such as tissue tears and tissue loss. In this paper we present techniques and algorithms for automatic registration and 3D reconstruction of conventionally produced mouse brain slices in a standardized atlas space. This is achieved first by constructing a virtual 3D mouse brain model from annotated slices of Allen Reference Atlas (ARA). Virtual re-slicing of the reconstructed model generates ARA-based slice images corresponding to the microscopic images of histological brain sections. These image pairs are aligned using a geometric approach through contour images. Histological artifacts in the microscopic images are detected and removed using Constrained Delaunay Triangulation before performing global alignment. Finally, non-linear registration is performed by solving Laplace's equation with Dirichlet boundary conditions. Our methods provide significant improvements over previously reported registration techniques for the tested slices in 3D space, especially on slices with significant histological artifacts. Further, as one of the application we count the number of neurons in various anatomical regions using a dataset of 51 microscopic slices from a single mouse brain. To the best of our knowledge the presented work is the first that automatically registers both clean as well as highly damaged high-resolutions histological slices of mouse brain to a 3D annotated reference atlas space. This work represents a significant contribution to this subfield of neuroscience as it provides tools to neuroanatomist for analyzing and processing histological data. Copyright © 2018 Elsevier B.V. All rights reserved.
The browse file of NASA/JPL quick-look radar images from the Loch Linnhe 1989 experiment
NASA Technical Reports Server (NTRS)
Brown, Walter E., Jr. (Editor)
1989-01-01
The Jet Propulsion Laboratory (JPL) Aircraft Synthetic Aperture Radar (AIRSAR) was deployed to Scotland to obtain radar imagery of ship wakes generated in Loch Linnhe. These observations were part of a joint US and UK experiment to study the internal waves generated by ships under partially controlled conditions. The AIRSAR was mounted on the NASA-Ames DC-8 aircraft. The data acquisition sequence consisted of 8 flights, each about 6 hours in duration, wherein 24 observations of the instrumented site were made on each flight. This Browse File provides the experimenters with a reference of the real time imagery (approximately 100 images) obtained on the 38-deg track. These radar images are copies of those obtained at the time of observation and show the general geometry of the ship wake features. To speed up processing during this flight, the images were all processed around zero Doppler, and thus azimuth ambiguities often occur when the drift angel (yaw) exceeded a few degrees. However, even with the various shortcomings, it is believed that the experimenter will find the Browse File useful in establishing a basis for further investigations.
NASA Technical Reports Server (NTRS)
Edgett, K. S.; Yingst, R. A.; Minitti, M. E.; Goetz, W.; Kah, L. C.; Kennedy, M. R.; Lipkaman, L. J.; Jensen, E. H.; Anderson, R. C.; Beegle, L. W.;
2013-01-01
The Mars Science Laboratory (MSL) mission is focused on assessing the past or present habitability of Mars, through interrogation of environment and environmental records at the Curiosity rover field site in Gale crater. The MSL team has two methods available to collect, process and deliver samples to onboard analytical laboratories, the Chemistry and Mineralogy instrument (CheMin) and the Sample Analysis at Mars (SAM) instrument suite. One approach obtains samples by drilling into a rock, the other uses a scoop to collect loose regolith fines. Scooping was planned to be first method performed on Mars because materials could be readily scooped multiple times and used to remove any remaining, minute terrestrial contaminants from the sample processing system, the Collection and Handling for In-Situ Martian Rock Analysis (CHIMRA). Because of this cleaning effort, the ideal first material to be scooped would consist of fine to very fine sand, like the interior of the Serpent Dune studied by the Mars Exploration Rover (MER) Spirit team in 2004 [1]. The MSL team selected a linear eolian deposit in the lee of a group of cobbles they named Rocknest (Fig. 1) as likely to be similar to Serpent Dune. Following the definitions in Chapter 13 of Bagnold [2], the deposit is termed a sand shadow. The scooping campaign occurred over approximately 6 weeks in October and November 2012. To support these activities, the Mars Hand Lens Imager (MAHLI) acquired images for engineering support/assessment and scientific inquiry.
3D printing application and numerical simulations in a fracture system
NASA Astrophysics Data System (ADS)
Yoon, H.; Martinez, M. J.
2017-12-01
The hydrogeological and mechanical properties in fractured and porous media are fundamental to predicting coupled multiphysics processes in the subsurface. Recent advances in experimental methods and multi-scale imaging capabilities have revolutionized our ability to quantitatively characterize geomaterials and digital counterparts are now routinely used for numerical simulations to characterize petrophysical and mechanical properties across scales. 3D printing is a very effective and creative technique that reproduce the digital images in a controlled way. For geoscience applications, 3D printing can be co-opted to print reproducible porous and fractured structures derived from CT-imaging of actual rocks and theoretical algorithms for experimental testing. In this work we used a stereolithography (SLA) method to create a single fracture network. The fracture in shale was first scanned using a microCT system and then the digital fracture network was printed into two parts and assembled. Aperture ranges from 0.3 to 1 mm. In particular, we discuss the design of single fracture network and the progress of printing practices to reproduce the fracture network system. Printed samples at different scales are used to measure the permeability and surface roughness. Various numerical simulations including (non-)reactive transport and multiphase flow cases are performed to study fluid flow characterization. We will also discuss the innovative advancement of 3D printing techniques applicable for coupled processes in the subsurface. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC., a wholly owned subsidiary of Honeywell International, Inc., for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-NA0003525.
Use of a Digital Camera To Document Student Observations in a Microbiology Laboratory Class.
ERIC Educational Resources Information Center
Mills, David A.; Kelley, Kevin; Jones, Michael
2001-01-01
Points out the lack of microscopic images of wine-related microbes. Uses a digital camera during a wine microbiology laboratory to capture student-generated microscope images. Discusses the advantages of using a digital camera in a teaching lab. (YDS)
A data grid for imaging-based clinical trials
NASA Astrophysics Data System (ADS)
Zhou, Zheng; Chao, Sander S.; Lee, Jasper; Liu, Brent; Documet, Jorge; Huang, H. K.
2007-03-01
Clinical trials play a crucial role in testing new drugs or devices in modern medicine. Medical imaging has also become an important tool in clinical trials because images provide a unique and fast diagnosis with visual observation and quantitative assessment. A typical imaging-based clinical trial consists of: 1) A well-defined rigorous clinical trial protocol, 2) a radiology core that has a quality control mechanism, a biostatistics component, and a server for storing and distributing data and analysis results; and 3) many field sites that generate and send image studies to the radiology core. As the number of clinical trials increases, it becomes a challenge for a radiology core servicing multiple trials to have a server robust enough to administrate and quickly distribute information to participating radiologists/clinicians worldwide. The Data Grid can satisfy the aforementioned requirements of imaging based clinical trials. In this paper, we present a Data Grid architecture for imaging-based clinical trials. A Data Grid prototype has been implemented in the Image Processing and Informatics (IPI) Laboratory at the University of Southern California to test and evaluate performance in storing trial images and analysis results for a clinical trial. The implementation methodology and evaluation protocol of the Data Grid are presented.
Introduction to clinical and laboratory (small-animal) image registration and fusion.
Zanzonico, Pat B; Nehmeh, Sadek A
2006-01-01
Imaging has long been a vital component of clinical medicine and, increasingly, of biomedical research in small-animals. Clinical and laboratory imaging modalities can be divided into two general categories, structural (or anatomical) and functional (or physiological). The latter, in particular, has spawned what has come to be known as "molecular imaging". Image registration and fusion have rapidly emerged as invaluable components of both clinical and small-animal imaging and has lead to the development and marketing of a variety of multi-modality, e.g. PET-CT, devices which provide registered and fused three-dimensional image sets. This paper briefly reviews the basics of image registration and fusion and available clinical and small-animal multi-modality instrumentation.
Spectrometer Images of Candidate Landing Sites for Next Mars Rover
NASA Technical Reports Server (NTRS)
2007-01-01
This composite shows four examples of 'browse' products the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) instrument obtained of areas on Mars near proposed landing sites for NASA's 2009 Mars Science Laboratory. These examples are from two of more than 30 candidate sites. They are enhanced color images of West Candor chasm (A) and Nili Fossae trough (B); and false color images indicating the presence of hydrated (water-containing) minerals in West Candor (C); and clay-like (phyllosilicate) minerals in Nili Fossae (D). CRISM is one of six science instruments on NASA's Mars Reconnaissance Orbiter. Led by The Johns Hopkins University Applied Physics Laboratory, Laurel, Md., the CRISM team includes expertise from universities, government agencies and small businesses in the United States and abroad. NASA's Jet Propulsion Laboratory, a division of the California Institute of Technology in Pasadena, manages the Mars Reconnaissance Orbiter and the Mars Science Laboratory for NASA's Science Mission Directorate, Washington. Lockheed Martin Space Systems, Denver, built the orbiter.Imaging on a Shoestring: Cost-Effective Technologies for Probing Vadose Zone Transport Processes
NASA Astrophysics Data System (ADS)
Corkhill, C.; Bridge, J. W.; Barns, G.; Fraser, R.; Romero-Gonzalez, M.; Wilson, R.; Banwart, S.
2010-12-01
Key barriers to the widespread uptake of imaging technology for high spatial resolution monitoring of porous media systems are cost and accessibility. X-ray tomography, magnetic resonance imaging (MRI), gamma and neutron radiography require highly specialised equipment, controlled laboratory environments and/or access to large synchrotron facilities. Here we present results from visible light, fluorescence and autoradiographic imaging techniques developed at low cost and applied in standard analytical laboratories, adapted where necessary at minimal capital expense. UV-visible time lapse fluorescence imaging (UV-vis TLFI) in a transparent thin bed chamber enabled microspheres labelled with fluorescent dye and a conservative fluorophore solute (disodium fluorescein) to be measured simultaneously in saturated, partially-saturated and actively draining quartz sand to elucidate empirical values for colloid transport and deposition parameters distributed throughout the flow field, independently of theoretical approximations. Key results include the first experimental quantification of the effects of ionic strength and air-water interfacial area on colloid deposition above a capillary fringe, and the first direct observations of particle mobilisation and redeposition by moving saturation gradients during drainage. UV-vis imaging was also used to study biodegradation and reactive transport in a variety of saturated conditions, applying fluorescence as a probe for oxygen and nitrate concentration gradients, pH, solute transport parameters, reduction of uranium, and mapping of two-dimensional flow fields around a model dipole flow borehole system to validate numerical models. Costs are low: LED excitation sources (< US 50), flow chambers (US 200) and detectors (although a complete scientific-grade CCD set-up costs around US$ 8000, robust datasets can be obtained using a commercial digital SLR camera) mean that set-ups can be flexible to meet changing experimental requirements. The critical limitations of UV-vis fluorescence imaging are the need for reliable fluorescent probes suited to the experimental objective, and the reliance on thin-bed (2D) transparent porous media. Autoradiographic techniques address some of these limitations permit imaging of key biogeochemical processes in opaque media using radioactive probes, without the need for specialised radiation sources. We present initial calibration data for the use of autoradiography to monitor transport parameters for radionuclides (99-technetium), and a novel application of a radioactive salt tracer as a probe for pore water content, in model porous media systems.
Speech processing asymmetry revealed by dichotic listening and functional brain imaging.
Hugdahl, Kenneth; Westerhausen, René
2016-12-01
In this article, we review research in our laboratory from the last 25 to 30 years on the neuronal basis for laterality of speech perception focusing on the upper, posterior parts of the temporal lobes, and its functional and structural connections to other brain regions. We review both behavioral and brain imaging data, with a focus on dichotic listening experiments, and using a variety of imaging modalities. The data have come in most parts from healthy individuals and from studies on normally functioning brain, although we also review a few selected clinical examples. We first review and discuss the structural model for the explanation of the right-ear advantage (REA) and left hemisphere asymmetry for auditory language processing. A common theme across many studies have been our interest in the interaction between bottom-up, stimulus-driven, and top-down, instruction-driven, aspects of hemispheric asymmetry, and how perceptual factors interact with cognitive factors to shape asymmetry of auditory language information processing. In summary, our research have shown laterality for the initial processing of consonant-vowel syllables, first observed as a behavioral REA when subjects are required to report which syllable of a dichotic syllable-pair they perceive. In subsequent work we have corroborated the REA with brain imaging, and have shown that the REA is modulated through both bottom-up manipulations of stimulus properties, like sound intensity, and top-down manipulations of cognitive properties, like attention focus. Copyright © 2015 Elsevier Ltd. All rights reserved.
Medical Image Analysis Facility
NASA Technical Reports Server (NTRS)
1978-01-01
To improve the quality of photos sent to Earth by unmanned spacecraft. NASA's Jet Propulsion Laboratory (JPL) developed a computerized image enhancement process that brings out detail not visible in the basic photo. JPL is now applying this technology to biomedical research in its Medical lrnage Analysis Facility, which employs computer enhancement techniques to analyze x-ray films of internal organs, such as the heart and lung. A major objective is study of the effects of I stress on persons with heart disease. In animal tests, computerized image processing is being used to study coronary artery lesions and the degree to which they reduce arterial blood flow when stress is applied. The photos illustrate the enhancement process. The upper picture is an x-ray photo in which the artery (dotted line) is barely discernible; in the post-enhancement photo at right, the whole artery and the lesions along its wall are clearly visible. The Medical lrnage Analysis Facility offers a faster means of studying the effects of complex coronary lesions in humans, and the research now being conducted on animals is expected to have important application to diagnosis and treatment of human coronary disease. Other uses of the facility's image processing capability include analysis of muscle biopsy and pap smear specimens, and study of the microscopic structure of fibroprotein in the human lung. Working with JPL on experiments are NASA's Ames Research Center, the University of Southern California School of Medicine, and Rancho Los Amigos Hospital, Downey, California.
Neutron bursts from long laboratory sparks
NASA Astrophysics Data System (ADS)
Kochkin, P.; Lehtinen, N. G.; Montanya, J.; Van Deursen, A.; Ostgaard, N.
2016-12-01
Neutron emission in association with thunderstorms and lightning discharges was reported by different investigators from ground-based observation platforms. In both cases such emission is explained by photonuclear reaction, since high-energy gamma-rays in sufficient fluxes are routinely detected from both, lightning and thunderclouds. The required gamma-rays are presumably generated by high-energy electrons in Bremsstrahlung process after their acceleration via cold and/or relativistic runaway mechanisms. This phenomenon attracted moderate scientific attention until fast neutron bursts (up to 10 MeV) from long 1 MV laboratory sparks have been reported. Clearly, with such relatively low applied voltage the electrons are unable to accelerate to the energies required for photo/electro disintegration. Moreover, all known elementary neutron generation processes are not capable to explain this emission right away. We performed an independent laboratory experiment on long sparks with the aim to confirm or disprove the neutron emission from them. The experimental setup was assembled at High-Voltage Laboratory in Barcelona and contained a Marx generator in a cone-cone spark gap configuration. The applied voltage was as low as 800 kV and the gap distance was only 60 cm. Two ns-fast cameras were located near the gap capturing short-exposure images of the pre-breakdown phenomenon at the expected neutron generation time. A plastic scintillation detector sensitive to neutrons was covered in 11 cm of lead and placed near the spark gap. The detector was calibrated and showed good performance in neutron detection. Apart of it, voltage, currents through both electrodes, and three X-ray detectors were also monitored in sophisticated measuring system. We will give an overview of the previous experimental and theoretical work in this topic, and present the results of our new experimental campaign. The conclusions are based on good signal-to-noise ratio measurements and are substantiated by high-contrast images.
Compact Video Microscope Imaging System Implemented in Colloid Studies
NASA Technical Reports Server (NTRS)
McDowell, Mark
2002-01-01
Long description Photographs showing fiber-optic light source, microscope and charge-coupled discharge (CCD) camera head connected to camera body, CCD camera body feeding data to image acquisition board in PC, and Cartesian robot controlled via PC board. The Compact Microscope Imaging System (CMIS) is a diagnostic tool with intelligent controls for use in space, industrial, medical, and security applications. CMIS can be used in situ with a minimum amount of user intervention. This system can scan, find areas of interest in, focus on, and acquire images automatically. Many multiple-cell experiments require microscopy for in situ observations; this is feasible only with compact microscope systems. CMIS is a miniature machine vision system that combines intelligent image processing with remote control. The software also has a user-friendly interface, which can be used independently of the hardware for further post-experiment analysis. CMIS has been successfully developed in the SML Laboratory at the NASA Glenn Research Center and adapted for use for colloid studies and is available for telescience experiments. The main innovations this year are an improved interface, optimized algorithms, and the ability to control conventional full-sized microscopes in addition to compact microscopes. The CMIS software-hardware interface is being integrated into our SML Analysis package, which will be a robust general-purpose image-processing package that can handle over 100 space and industrial applications.
Niedzwiecki, Megan M; Austin, Christine; Remark, Romain; Merad, Miriam; Gnjatic, Sacha; Estrada-Gutierrez, Guadalupe; Espejel-Nuñez, Aurora; Borboa-Olivares, Hector; Guzman-Huerta, Mario; Wright, Rosalind J; Wright, Robert O; Arora, Manish
2016-04-01
Fetal exposure to essential and toxic metals can influence life-long health trajectories. The placenta regulates chemical transmission from maternal circulation to the fetus and itself exhibits a complex response to environmental stressors. The placenta can thus be a useful matrix to monitor metal exposures and stress responses in utero, but strategies to explore the biologic effects of metal mixtures in this organ are not well-developed. In this proof-of-concept study, we used laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) to measure the distributions of multiple metals in placental tissue from a low-birth-weight pregnancy, and we developed an approach to identify the components of metal mixtures that colocalized with biological response markers. Our novel workflow, which includes custom-developed software tools and algorithms for spatial outlier identification and background subtraction in multidimensional elemental image stacks, enables rapid image processing and seamless integration of data from elemental imaging and immunohistochemistry. Using quantitative spatial statistics, we identified distinct patterns of metal accumulation at sites of inflammation. Broadly, our multiplexed approach can be used to explore the mechanisms mediating complex metal exposures and biologic responses within placentae and other tissue types. Our LA-ICP-MS image processing workflow can be accessed through our interactive R Shiny application 'shinyImaging', which is available at or through our laboratory's website, .
Stand-off CWA imaging system: second sight MS
NASA Astrophysics Data System (ADS)
Bernascolle, Philippe F.; Elichabe, Audrey; Fervel, Franck; Haumonté, Jean-Baptiste
2012-06-01
In recent years, several manufactures of IR imaging devices have launched commercial models applicable to a wide range of chemical species. These cameras are rugged and sufficiently sensitive to detect low concentrations of toxic and combustible gases. Bertin Technologies, specialized in the design and supply of innovating systems for industry, defense and health, has developed a stand-off gas imaging system using a multi-spectral infrared imaging technology. With this system, the gas cloud size, localization and evolution can be displayed in real time. This technology was developed several years ago in partnership with the CEB, a French MoD CBRN organization. The goal was to meet the need for early warning caused by a chemical threat. With a night & day efficiency of up to 5 km, this process is able to detect Chemical Warfare Agents (CWA), critical Toxic Industrial Compounds (TIC) and also flammable gases. The system has been adapted to detect industrial spillage, using off-the-shelf uncooled infrared cameras, allowing 24/7 surveillance without costly frequent maintenance. The changes brought to the system are in compliance with Military Specifications (MS) and primarily focus on the signal processing improving the classification of the detected products and on the simplification of the Human Machine Interface (HMI). Second Sight MS is the only mass produced, passive stand-off CWA imaging system with a wide angle (up to 60°) already used by several regular armies around the world. This paper examines this IR gas imager performance when exposed to several CWA, TIC and simulant compounds. First, we will describe the Second Sight MS system. The theory of gas detection, visualization and classification functions has already been described elsewhere, so we will just summarize it here. We will then present the main topic of this paper which is the results of the tests done in laboratory on live agents and in open field on simulant. The sensitivity threshold of the camera measured in laboratory, on some CWA (G, H agents...) and TIC (ammonia, sulfur dioxide...) will be given. The result of the detection and visualization of a gas cloud in open field testing for some simulants (DMMP, SF6) at a far distance will be also shown.
Kozhevnikov, Maria; Dhond, Rupali P.
2012-01-01
Most research on three-dimensional (3D) visual-spatial processing has been conducted using traditional non-immersive 2D displays. Here we investigated how individuals generate and transform mental images within 3D immersive (3DI) virtual environments, in which the viewers perceive themselves as being surrounded by a 3D world. In Experiment 1, we compared participants’ performance on the Shepard and Metzler (1971) mental rotation (MR) task across the following three types of visual presentation environments; traditional 2D non-immersive (2DNI), 3D non-immersive (3DNI – anaglyphic glasses), and 3DI (head mounted display with position and head orientation tracking). In Experiment 2, we examined how the use of different backgrounds affected MR processes within the 3DI environment. In Experiment 3, we compared electroencephalogram data recorded while participants were mentally rotating visual-spatial images presented in 3DI vs. 2DNI environments. Overall, the findings of the three experiments suggest that visual-spatial processing is different in immersive and non-immersive environments, and that immersive environments may require different image encoding and transformation strategies than the two other non-immersive environments. Specifically, in a non-immersive environment, participants may utilize a scene-based frame of reference and allocentric encoding whereas immersive environments may encourage the use of a viewer-centered frame of reference and egocentric encoding. These findings also suggest that MR performed in laboratory conditions using a traditional 2D computer screen may not reflect spatial processing as it would occur in the real world. PMID:22908003
Space Radar Image of Mammoth Mountain, California
1999-05-01
This false-color composite radar image of the Mammoth Mountain area in the Sierra Nevada Mountains, California, was acquired by the Spaceborne Imaging Radar-C and X-band Synthetic Aperture Radar aboard the space shuttle Endeavour on its 67th orbit on October 3, 1994. The image is centered at 37.6 degrees north latitude and 119.0 degrees west longitude. The area is about 39 kilometers by 51 kilometers (24 miles by 31 miles). North is toward the bottom, about 45 degrees to the right. In this image, red was created using L-band (horizontally transmitted/vertically received) polarization data; green was created using C-band (horizontally transmitted/vertically received) polarization data; and blue was created using C-band (horizontally transmitted and received) polarization data. Crawley Lake appears dark at the center left of the image, just above or south of Long Valley. The Mammoth Mountain ski area is visible at the top right of the scene. The red areas correspond to forests, the dark blue areas are bare surfaces and the green areas are short vegetation, mainly brush. The purple areas at the higher elevations in the upper part of the scene are discontinuous patches of snow cover from a September 28 storm. New, very thin snow was falling before and during the second space shuttle pass. In parallel with the operational SIR-C data processing, an experimental effort is being conducted to test SAR data processing using the Jet Propulsion Laboratory's massively parallel supercomputing facility, centered around the Cray Research T3D. These experiments will assess the abilities of large supercomputers to produce high throughput Synthetic Aperture Radar processing in preparation for upcoming data-intensive SAR missions. The image released here was produced as part of this experimental effort. http://photojournal.jpl.nasa.gov/catalog/PIA01746
ERIC Educational Resources Information Center
Ayvaci, Hakan Sevki; Yildiz, Mehmet; Bakirci, Hasan
2015-01-01
This study employed a print laboratory material based on 5E model of constructivist learning approach to teach reflection of light and Image on a Plane Mirror. The effect of the instruction which conducted with the designed print laboratory material on academic achievements of prospective science and technology teachers and their attitudes towards…
O'Doherty, Jim; Henricson, Joakim; Falk, Magnus; Anderson, Chris D
2013-11-01
In tissue viability imaging (TiVi), an assessment method for skin erythema, correct orientation of skin position from provocation to assessment optimizes data interpretation. Image processing algorithms could compensate for the effects of skin translation, torsion and rotation realigning assessment images to the position of the skin at provocation. A reference image of a divergent, UVB phototest was acquired, as well as test images at varying levels of translation, rotation and torsion. Using 12 skin markers, an algorithm was applied to restore the distorted test images to the reference image. The algorithm corrected torsion and rotation up to approximately 35 degrees. The radius of the erythemal reaction and average value of the input image closely matched that of the reference image's 'true value'. The image 'de-warping' procedure improves the robustness of the response image evaluation in a clinical research setting and opens the possibility of the correction of possibly flawed images performed away from the laboratory setting by the subject/patient themselves. This opportunity may increase the use of photo-testing and, by extension, other late response skin testing where the necessity of a return assessment visit is a disincentive to performance of the test. © 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.
Measurements of Low-Frequency Acoustic Attenuation in Soils.
1994-10-13
Engineering Research Laboratory to design an acoustic subsurface imaging system, a set of experiments was conducted in which the attenuation and the velocity...support of the U.S. Army Construction Engineering Research Laboratory’s efforts to design an acoustic subsurface imaging system which would ideally be...of acoustic waves such as those generated by a subsurface imaging system. An experiment reported in the literature characterized the acoustic
Spectral ratio imaging methods for geological remote sensing from aircraft and satellites
NASA Technical Reports Server (NTRS)
Vincent, R. K. (Principal Investigator)
1973-01-01
The author has identified the following significant results. The production of ratio images from multispectral scanner data is described and several examples of ratio images from aircraft and ERTS-1 data are given for visible, reflective infrared, and thermal infrared wavelengths. The application of photogrammetric techniques to ratio images, defined for this paper as ratio scannergrammetry, is considerably aided by the lesser dependence of ratio images on atmospheric and solar illumination variations, compared with single channel scanner imagery or aerial photos. Ratio scannergrammetry is further aided by the proportionality between ratios of a target deduced from ratio images and ratios of reflectances calculated from laboratory spectra of samples from the target area. Consequently, ratios calculated from laboratory data can be used to predict which ratios are best for discriminating a given rock or mineral, to predict what other rocks or minerals will be confused with it, and finally, to place ratio scannergrammetry on an absolute basis, within an estimated standard error on the order of 5% to 10%. Examples of relative agreement between laboratory data and ratio images are given from two iron oxides, hematite and magnetite.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Cui Yunfeng; Galvin, James M.; Radiation Therapy Oncology Group, American College of Radiology, Philadelphia, Pennsylvania
2013-01-01
Purpose: To report the process and initial experience of remote credentialing of three-dimensional (3D) image guided radiation therapy (IGRT) as part of the quality assurance (QA) of submitted data for Radiation Therapy Oncology Group (RTOG) clinical trials; and to identify major issues resulting from this process and analyze the review results on patient positioning shifts. Methods and Materials: Image guided radiation therapy datasets including in-room positioning CT scans and daily shifts applied were submitted through the Image Guided Therapy QA Center from institutions for the IGRT credentialing process, as required by various RTOG trials. A centralized virtual environment is establishedmore » at the RTOG Core Laboratory, containing analysis tools and database infrastructure for remote review by the Physics Principal Investigators of each protocol. The appropriateness of IGRT technique and volumetric image registration accuracy were evaluated. Registration accuracy was verified by repeat registration with a third-party registration software system. With the accumulated review results, registration differences between those obtained by the Physics Principal Investigators and from the institutions were analyzed for different imaging sites, shift directions, and imaging modalities. Results: The remote review process was successfully carried out for 87 3D cases (out of 137 total cases, including 2-dimensional and 3D) during 2010. Frequent errors in submitted IGRT data and challenges in the review of image registration for some special cases were identified. Workarounds for these issues were developed. The average differences of registration results between reviewers and institutions ranged between 2 mm and 3 mm. Large discrepancies in the superior-inferior direction were found for megavoltage CT cases, owing to low spatial resolution in this direction for most megavoltage CT cases. Conclusion: This first experience indicated that remote review for 3D IGRT as part of QA for RTOG clinical trials is feasible and effective. The magnitude of registration discrepancy between institution and reviewer was presented, and the major issues were investigated to further improve this remote evaluation process.« less
The National Ballistics Imaging Comparison (NBIC) project.
Song, J; Vorburger, T V; Ballou, S; Thompson, R M; Yen, J; Renegar, T B; Zheng, A; Silver, R M; Ols, M
2012-03-10
In response to the guidelines issued by the American Society of Crime Laboratory Directors/Laboratory Accreditation Board (ASCLD/LAB-International) to establish traceability and quality assurance in U.S. crime laboratories, a NIST/ATF joint project entitled National Ballistics Imaging Comparison (NBIC) was initialized in 2008. The NBIC project aims to establish a National Traceability and Quality System for ballistics identifications in crime laboratories within the National Integrated Ballistics Information Network (NIBIN) of the U.S. NIST Standard Reference Material (SRM) 2460 bullets and 2461 cartridge cases are used as reference standards. 19 ballistics examiners from 13 U.S. crime laboratories participated in this project. They each performed 24 periodic image acquisitions and correlations of the SRM bullets and cartridge cases over the course of a year, but one examiner only participated in Phase 1 tests of SRM cartridge case. The correlation scores were collected by NIST for statistical analyses, from which control charts and control limits were developed for the proposed Quality System and for promoting future assessments and accreditations for firearm evidence in U.S. forensic laboratories in accordance with the ISO 17025 Standard. Published by Elsevier Ireland Ltd.
The evolving practice of nuclear cardiology: results from the 2011 ASNC member survey.
Tilkemeier, Peter; Green, Jacqueline; Einstein, Andrew J; Fazel, Reza; Reames, Patricia; Shaw, Leslee J
2012-12-01
Today's imaging laboratories face challenges including reimbursement, prior authorization, and accreditation standards. The impact on the practice of nuclear cardiology in the United States is unknown. We conducted a survey of ASNC members to provide a snapshot of nuclear cardiology imaging laboratories in 2011. The survey identified practice patterns including personnel, volumes, protocols used, and laboratory characteristics. We employed random sampling methodology stratified geographically. The response rate was 19.5% (73/374 laboratories). A non-random survey conducted in 2001 of 25 laboratories served as a comparator. A total of 73 laboratories, representing 202 physicians and 177 technologists responded. The reported median procedural volume was 1,225 studies annually; 88.9% of laboratories were accredited. Compared with 2001, dual isotope imaging protocol use dropped from 72% to 15.6%. Five markers of quality were surveyed. Half of laboratories use the American College of Cardiology's Appropriate Use Criteria, 61% used segmental scoring, and 32% provided guidance on post-test therapeutic management. 89% perform catheterization correlations while only 33% implemented radiation dose tracking. This survey of ASNC members provides critical information on nuclear cardiology practice to better target and service our members' needs. These data can prove invaluable to target educational needs and inform healthcare policy of contemporary nuclear cardiology practice.
An Analysis of Transitional Doctor of Physical Therapy Degrees for the Department of Defense
2004-01-01
evidence based medicine , pharmacology, laboratory testing, and imaging. In a recent evidence based practice survey, respondents agreed that the use of...used (Jette et al., 2003). Evidence based medicine , diagnosis, pharmacology, laboratory testing, and imaging are well represented in doctoral
Lemmon, Vance P; Jia, Yuanyuan; Shi, Yan; Holbrook, S Douglas; Bixby, John L; Buchser, William
2011-11-01
The Miami Project to Cure Paralysis, part of the University of Miami Miller School of Medicine, includes a laboratory devoted to High Content Analysis (HCA) of neurons. The goal of the laboratory is to uncover signaling pathways, genes, compounds, or drugs that can be used to promote nerve growth. HCA permits the quantification of neuronal morphology, including the lengths and numbers of axons. HCA of various libraries on primary neurons requires a team-based approach, a variety of process steps and complex manipulations of cells and libraries to obtain meaningful results. HCA itself produces vast amounts of information including images, well-based data and cell-based phenotypic measures. Documenting and integrating the experimental workflows, library data and extensive experimental results is challenging. For academic laboratories generating large data sets from experiments involving thousands of perturbagens, a Laboratory Information Management System (LIMS) is the data tracking solution of choice. With both productivity and efficiency as driving rationales, the Miami Project has equipped its HCA laboratory with an On Demand or Software As A Service (SaaS) LIMS to ensure the quality of its experiments and workflows. The article discusses how the system was selected and integrated into the laboratory. The advantages of a SaaS based LIMS over a client-server based system are described. © 2011 Bentham Science Publishers
Einstein, Andrew J.; Berman, Daniel S.; Min, James K.; Hendel, Robert C.; Gerber, Thomas C.; Carr, J. Jeffrey; Cerqueira, Manuel D.; Cullom, S. James; DeKemp, Robert; Dickert, Neal; Dorbala, Sharmila; Garcia, Ernest V.; Gibbons, Raymond J.; Halliburton, Sandra S.; Hausleiter, Jörg; Heller, Gary V.; Jerome, Scott; Lesser, John R.; Fazel, Reza; Raff, Gilbert L.; Tilkemeier, Peter; Williams, Kim A.; Shaw, Leslee J.
2014-01-01
Objective To identify key components of a radiation accountability framework fostering patient-centered imaging and shared decision-making in cardiac imaging. Background An NIH-NHLBI/NCI-sponsored symposium was held in November 2012 to address these issues. Methods Symposium participants, working in three tracks, identified key components of a framework to target critical radiation safety issues for the patient, the laboratory, and the larger population of patients with known or suspected cardiovascular disease. Results Use of ionizing radiation during an imaging procedure should be disclosed to all patients by the ordering provider at the time of ordering, and reinforced by the performing provider team. An imaging protocol with effective dose ≤3mSv is considered very low risk, not warranting extensive discussion or written consent. However, a protocol effective dose <20mSv was proposed as a level requiring particular attention in terms of shared decision-making and either formal discussion or written informed consent. Laboratory reporting of radiation dosimetry is a critical component of creating a quality laboratory fostering a patient-centered environment with transparent procedural methodology. Efforts should be directed to avoiding testing involving radiation, in patients with inappropriate indications. Standardized reporting and diagnostic reference levels for computed tomography and nuclear cardiology are important for the goal of public reporting of laboratory radiation dose levels in conjunction with diagnostic performance. Conclusions The development of cardiac imaging technologies revolutionized cardiology practice by allowing routine, noninvasive assessment of myocardial perfusion and anatomy. It is now incumbent upon the imaging community to create an accountability framework to safely drive appropriate imaging utilization. PMID:24530677
Education and Outreach with the Northwest Indiana Robotic Telescope
NASA Astrophysics Data System (ADS)
Rengstorf, Adam W.; Slavin, S. D.
2011-01-01
The Northwest Indiana Robotic (NIRo) Telescope is being used to completely revise the introductory astronomy laboratory experiments at Purdue University Calumet (PUC). The NIRo telescope is a new 20-inch RC telescope. It was dedicated in Aug 2010, is designed to be operated remotely and/or robotically, and is located 30 miles south of PUC's campus in rural Lake county, IN. A suite of laboratory experiments is being developed and piloted during the 2010-2011 academic year. Lab experiments will progress from introductions to instruments and software, through simple data visualization and analysis, to developing and submitting an observing plan to complete multi-week laboratories. Experiments for both the solar system course and the stars & galaxies are being developed. Students in the solar system course will request and analyze images for such experiments as recreating Aristarchus’ relative size & distance calculations, establishing an observing strategy to monitor the Galilean satellites & determine Jupiter's mass, an ongoing `asteroid hunt', Martian retrograde motion, and Venusian phases. The stars & galaxies course will complete labs on galaxy morphology, eclipsing binaries, building an HR-diagram, cluster aging, and distances to Cepheid variables. The main outreach component is the development of a primary education program. In conjunction with the PUC School of Education and area middle-school science teachers, we are in the process of identifying the subset of laboratory ideas best suited to the State of Indiana Earth & Space Science teaching standards from grades 6 - 8. These laboratories are being developed into finished data products, curricula, and learning modules appropriate for the middle school classroom. The middle school classroom will be able to request observations and retrieve reduced images via an internet portal, currently in development. This project has been funded by NSF award #DUE-0736592.
Photometric study of cometary analogs in the LOSSy laboratory at the University of Bern
NASA Astrophysics Data System (ADS)
Pommerol, A.; Thomas, N.; Jost, B.; Poch, O.
2014-07-01
We have set up the LOSSy laboratory (Laboratory for Outflow Studies of Sublimating Materials) to study the spectro-photometric properties of various analogs of planetary-object surfaces, with a special emphasis on icy samples and their evolution under simulated space conditions. This laboratory is currently equipped with two facilities: the PHIRE-2 radio-goniometer, designed to measure the bidirectional visible reflectance of samples under a wide range of geometries and the SCITEAS simulation chamber, designed to follow the evolution of icy samples subliming under low temperature and low pressure conditions by means of VIS-NIR hyperspectral imaging. We will report on the characterization of cometary analogs using both facilities. We produce these analogs by mixing in various proportions fine-grained ice, mineral and organic matter. Various preparation protocols have been defined to produce different textures of sample. Using the PHIRE-2 radio-goniometer, we are building a catalog of bidirectional reflectance data for various cometary analogs, varying by steps the different parameters susceptible to affect the reflectance phase function. In particular, we have recently upgraded the instrument to be able to characterize in detail the opposition effect by allowing measurements of the reflectance at very low phase angle. This laboratory dataset is intended to be used for the analysis of the data acquired by the OSIRIS imager onboard Rosetta. Using the SCITEAS simulation chamber, we have followed for 30 hours the evolution of a cometary analog placed under secondary vacuum (<10^{-6} mbar) and maintained at low temperature (170-200 K) for more than 30 hours. We analyzed the temporal evolution of the morphology and the photometry of the surface of the sample to identify which processes affect the surfaces of cometary nuclei during sublimation and how they affect their visible and near-infrared surface properties.
NASA Technical Reports Server (NTRS)
Cetin, Haluk
1999-01-01
The purpose of this project was to establish a new hyperspectral remote sensing laboratory at the Mid-America Remote sensing Center (MARC), dedicated to in situ and laboratory measurements of environmental samples and to the manipulation, analysis, and storage of remotely sensed data for environmental monitoring and research in ecological modeling using hyperspectral remote sensing at MARC, one of three research facilities of the Center of Reservoir Research at Murray State University (MSU), a Kentucky Commonwealth Center of Excellence. The equipment purchased, a FieldSpec FR portable spectroradiometer and peripherals, and ENVI hyperspectral data processing software, allowed MARC to provide hands-on experience, education, and training for the students of the Department of Geosciences in quantitative remote sensing using hyperspectral data, Geographic Information System (GIS), digital image processing (DIP), computer, geological and geophysical mapping; to provide field support to the researchers and students collecting in situ and laboratory measurements of environmental data; to create a spectral library of the cover types and to establish a World Wide Web server to provide the spectral library to other academic, state and Federal institutions. Much of the research will soon be published in scientific journals. A World Wide Web page has been created at the web site of MARC. Results of this project are grouped in two categories, education and research accomplishments. The Principal Investigator (PI) modified remote sensing and DIP courses to introduce students to ii situ field spectra and laboratory remote sensing studies for environmental monitoring in the region by using the new equipment in the courses. The PI collected in situ measurements using the spectroradiometer for the ER-2 mission to Puerto Rico project for the Moderate Resolution Imaging Spectrometer (MODIS) Airborne Simulator (MAS). Currently MARC is mapping water quality in Kentucky Lake and vegetation in the Land-Between-the Lakes (LBL) using Landsat-TM data. A Landsat-TM scene of the same day was obtained to relate ground measurements to the satellite data. A spectral library has been created for overstory species in LBL. Some of the methods, such as NPDF and IDFD techniques for spectral unmixing and reduction of effects of shadows in classifications- comparison of hyperspectral classification techniques, and spectral nonlinear and linear unmixing techniques, are being tested using the laboratory.
Methods of training the graduate level and professional geologist in remote sensing technology
NASA Technical Reports Server (NTRS)
Kolm, K. E.
1981-01-01
Requirements for a basic course in remote sensing to accommodate the needs of the graduate level and professional geologist are described. The course should stress the general topics of basic remote sensing theory, the theory and data types relating to different remote sensing systems, an introduction to the basic concepts of computer image processing and analysis, the characteristics of different data types, the development of methods for geological interpretations, the integration of all scales and data types of remote sensing in a given study, the integration of other data bases (geophysical and geochemical) into a remote sensing study, and geological remote sensing applications. The laboratories should stress hands on experience to reinforce the concepts and procedures presented in the lecture. The geologist should then be encouraged to pursue a second course in computer image processing and analysis of remotely sensed data.
NASA Astrophysics Data System (ADS)
Maturilli, A.; Ferrari, S.; Helbert, J.; D'Incecco, P.; D'Amore, M.
2011-12-01
In the Planetary Emissivity Laboratory (PEL) at the Institute for Planetary Research of the German Aerospace Center (DLR) in Berlin, we set-up a simulation chamber for the spectroscopic investigation of minerals separates under Mercurial conditions. The chamber can be evacuated to 10-4 bar and the target samples heated to 700 K within few minutes, thanks to the innovative inductive heating system. While developing the protocol for the high temperature spectroscopy measurements we discovered interesting "morphologies" on the sample surfaces. The powders are poured into stainless steel cups of 50 mm internal diameter, 8 mm height and 3 mm depth, having a 5 mm thick base (thus leaving 3 mm free space for the minerals), and rim 1 mm thick. We selected several minerals of interest for Mercurial surface composition and for each of them we analyzed various grain size separates, to study the influence of grain dimensions to the process of thermal stressing. We observed that for the smaller grain size separate (0-25 μm) the thermal stress mainly induces large depressions and fractures, while on larger grain sizes (125-250 μm) small depressions and a cratered surface. Our current working hypothesis is that these features are mainly caused by thermal stress induced by a radiatively quickly cooling surface layer covering the much hotter bulk material. Further investigation is ongoing to understand the processes better. The observed morphologies exhibit surprising similarities to features observed at planetary scale size for example on Mercury and even on Venus. Especially the high resolution images provided currently from MESSENGER'S Mercury Dual Imaging System (MDIS) instrument has revealed plains dominated by polygonal fractures whose origin still have to be determined. Our laboratory analogue studies might in the future provide some insight into the processes creating those features
NASA Technical Reports Server (NTRS)
Edgett, Kenneth S.; Anderson, Donald L.
1995-01-01
This paper describes an empirical method to correct TIMS (Thermal Infrared Multispectral Scanner) data for atmospheric effects by transferring calibration from a laboratory thermal emission spectrometer to the TIMS multispectral image. The method does so by comparing the laboratory spectra of samples gathered in the field with TIMS 6-point spectra for pixels at the location of field sampling sites. The transference of calibration also makes it possible to use spectra from the laboratory as endmembers in unmixing studies of TIMS data.
MOBLAB: a mobile laboratory for testing real-time vision-based systems in path monitoring
NASA Astrophysics Data System (ADS)
Cumani, Aldo; Denasi, Sandra; Grattoni, Paolo; Guiducci, Antonio; Pettiti, Giuseppe; Quaglia, Giorgio
1995-01-01
In the framework of the EUREKA PROMETHEUS European Project, a Mobile Laboratory (MOBLAB) has been equipped for studying, implementing and testing real-time algorithms which monitor the path of a vehicle moving on roads. Its goal is the evaluation of systems suitable to map the position of the vehicle within the environment where it moves, to detect obstacles, to estimate motion, to plan the path and to warn the driver about unsafe conditions. MOBLAB has been built with the financial support of the National Research Council and will be shared with teams working in the PROMETHEUS Project. It consists of a van equipped with an autonomous power supply, a real-time image processing system, workstations and PCs, B/W and color TV cameras, and TV equipment. This paper describes the laboratory outline and presents the computer vision system and the strategies that have been studied and are being developed at I.E.N. `Galileo Ferraris'. The system is based on several tasks that cooperate to integrate information gathered from different processes and sources of knowledge. Some preliminary results are presented showing the performances of the system.
This image, looking south, shows a typical corridor in the ...
This image, looking south, shows a typical corridor in the laboratory area of the building, where numerous pipes were required to carry the various utilities needed for procedure and safety equipment - Department of Energy, Mound Facility, Electronics Laboratory Building (E Building), One Mound Road, Miamisburg, Montgomery County, OH
LWIR hyperspectral imager based on a diffractive optics lens
NASA Astrophysics Data System (ADS)
Gupta, Neelam
2009-05-01
A diffractive optics lens based longwave infrared hyperspectral imager has been used to collect laboratory and outdoor field test data. The imager uses a specially designed diffractive optics Ge lens with a 320×256 HgCdTe focal plane array (FPA) cooled with a Sterling-cooler. The imager operates in 8-10.5 μm (long wave IR, LWIR) spectral region and an image cube with 50 to 200 bands can be acquired rapidly. Spectral images at different wavelengths are obtained by moving the lens along its optical axis. An f/2.38 diffractive lens is used with a focal length of 70 mm at 8 μm. The IFOV is 0.57 mrad which corresponds to an FOV of 10.48°. The spectral resolution of the imager is 0.034 μm at 9 μm. The pixel size is 40×40 μm2 in the FPA. In post processing of image cube data contributions due to wavelengths other than the focused one are removed and a correction to account for the change in magnification due to the motion of the lens is applied to each spectral image. A brief description of the imager, data collection and analysis to characterize the performance of the imager will be presented in this paper.
Imaging characteristics of photogrammetric camera systems
Welch, R.; Halliday, J.
1973-01-01
In view of the current interest in high-altitude and space photographic systems for photogrammetric mapping, the United States Geological Survey (U.S.G.S.) undertook a comprehensive research project designed to explore the practical aspects of applying the latest image quality evaluation techniques to the analysis of such systems. The project had two direct objectives: (1) to evaluate the imaging characteristics of current U.S.G.S. photogrammetric camera systems; and (2) to develop methodologies for predicting the imaging capabilities of photogrammetric camera systems, comparing conventional systems with new or different types of systems, and analyzing the image quality of photographs. Image quality was judged in terms of a number of evaluation factors including response functions, resolving power, and the detectability and measurability of small detail. The limiting capabilities of the U.S.G.S. 6-inch and 12-inch focal length camera systems were established by analyzing laboratory and aerial photographs in terms of these evaluation factors. In the process, the contributing effects of relevant parameters such as lens aberrations, lens aperture, shutter function, image motion, film type, and target contrast procedures for analyzing image quality and predicting and comparing performance capabilities. ?? 1973.
Multimission image processing and science data visualization
NASA Technical Reports Server (NTRS)
Green, William B.
1993-01-01
The Operational Science Analysis (OSA) Functional area supports science instrument data display, analysis, visualization and photo processing in support of flight operations of planetary spacecraft managed by the Jet Propulsion Laboratory (JPL). This paper describes the data products generated by the OSA functional area, and the current computer system used to generate these data products. The objectives on a system upgrade now in process are described. The design approach to development of the new system are reviewed, including use of the Unix operating system and X-Window display standards to provide platform independence, portability, and modularity within the new system, is reviewed. The new system should provide a modular and scaleable capability supporting a variety of future missions at JPL.
Guidance for Efficient Small Animal Imaging Quality Control.
Osborne, Dustin R; Kuntner, Claudia; Berr, Stuart; Stout, David
2017-08-01
Routine quality control is a critical aspect of properly maintaining high-performance small animal imaging instrumentation. A robust quality control program helps produce more reliable data both for academic purposes and as proof of system performance for contract imaging work. For preclinical imaging laboratories, the combination of costs and available resources often limits their ability to produce efficient and effective quality control programs. This work presents a series of simplified quality control procedures that are accessible to a wide range of preclinical imaging laboratories. Our intent is to provide minimum guidelines for routine quality control that can assist preclinical imaging specialists in setting up an appropriate quality control program for their facility.
NASA Astrophysics Data System (ADS)
Franck, Charmaine C.; Lee, Dave; Espinola, Richard L.; Murrill, Steven R.; Jacobs, Eddie L.; Griffin, Steve T.; Petkie, Douglas T.; Reynolds, Joe
2007-04-01
This paper describes the design and performance of the U.S. Army RDECOM CERDEC Night Vision and Electronic Sensors Directorate's (NVESD), active 0.640-THz imaging testbed, developed in support of the Defense Advanced Research Project Agency's (DARPA) Terahertz Imaging Focal-Plane Technology (TIFT) program. The laboratory measurements and standoff images were acquired during the development of a NVESD and Army Research Laboratory terahertz imaging performance model. The imaging testbed is based on a 12-inch-diameter Off-Axis Elliptical (OAE) mirror designed with one focal length at 1 m and the other at 10 m. This paper will describe the design considerations of the OAE-mirror, dual-capability, active imaging testbed, as well as measurement/imaging results used to further develop the model.
Signal and image processing algorithm performance in a virtual and elastic computing environment
NASA Astrophysics Data System (ADS)
Bennett, Kelly W.; Robertson, James
2013-05-01
The U.S. Army Research Laboratory (ARL) supports the development of classification, detection, tracking, and localization algorithms using multiple sensing modalities including acoustic, seismic, E-field, magnetic field, PIR, and visual and IR imaging. Multimodal sensors collect large amounts of data in support of algorithm development. The resulting large amount of data, and their associated high-performance computing needs, increases and challenges existing computing infrastructures. Purchasing computer power as a commodity using a Cloud service offers low-cost, pay-as-you-go pricing models, scalability, and elasticity that may provide solutions to develop and optimize algorithms without having to procure additional hardware and resources. This paper provides a detailed look at using a commercial cloud service provider, such as Amazon Web Services (AWS), to develop and deploy simple signal and image processing algorithms in a cloud and run the algorithms on a large set of data archived in the ARL Multimodal Signatures Database (MMSDB). Analytical results will provide performance comparisons with existing infrastructure. A discussion on using cloud computing with government data will discuss best security practices that exist within cloud services, such as AWS.
Development of an optical microscopy system for automated bubble cloud analysis.
Wesley, Daniel J; Brittle, Stuart A; Toolan, Daniel T W
2016-08-01
Recently, the number of uses of bubbles has begun to increase dramatically, with medicine, biofuel production, and wastewater treatment just some of the industries taking advantage of bubble properties, such as high mass transfer. As a result, more and more focus is being placed on the understanding and control of bubble formation processes and there are currently numerous techniques utilized to facilitate this understanding. Acoustic bubble sizing (ABS) and laser scattering techniques are able to provide information regarding bubble size and size distribution with minimal data processing, a major advantage over current optical-based direct imaging approaches. This paper demonstrates how direct bubble-imaging methods can be improved upon to yield high levels of automation and thus data comparable to ABS and laser scattering. We also discuss the added benefits of the direct imaging approaches and how it is possible to obtain considerable additional information above and beyond that which ABS and laser scattering can supply. This work could easily be exploited by both industrial-scale operations and small-scale laboratory studies, as this straightforward and cost-effective approach is highly transferrable and intuitive to use.
Plass, Lindsey M; McGee, Terrence G; Elliott, James M
2016-02-01
A 58-year-old man was referred to physical therapy with a primary complaint of intermittent low back pain (LBP) 2 weeks after being in a motor vehicle collision. The absence of red flags justified the initiation of treatment, but when symptoms of unrelenting LBP emerged, he was referred to his primary care physician with a request for further medical workup. Before further imaging work-up was performed, the patient presented to the emergency room with a urinary complaint; this, in combination with unrelenting LBP, prompted further imaging follow-up. Lumbar/thoracic spine magnetic resonance imaging revealed multiple compression fractures and diffuse bone marrow heterogeneity consistent with a malignant infiltrative marrow process. The patient underwent additional laboratory testing and a bone marrow aspirate and biopsy that confirmed the diagnosis of multiple myeloma.
Imaging and detection of mines from acoustic measurements
NASA Astrophysics Data System (ADS)
Witten, Alan J.; DiMarzio, Charles A.; Li, Wen; McKnight, Stephen W.
1999-08-01
A laboratory-scale acoustic experiment is described where a buried target, a hockey puck cut in half, is shallowly buried in a sand box. To avoid the need for source and receiver coupling to the host sand, an acoustic wave is generated in the subsurface by a pulsed laser suspended above the air-sand interface. Similarly, an airborne microphone is suspended above this interface and moved in unison with the laser. After some pre-processing of the data, reflections for the target, although weak, could clearly be identified. While the existence and location of the target can be determined by inspection of the data, its unique shape can not. Since target discrimination is important in mine detection, a 3D imaging algorithm was applied to the acquired acoustic data. This algorithm yielded a reconstructed image where the shape of the target was resolved.
Laboratory demonstration of a broadband six-level phase mask coronagraph.
Patru, Fabien; Baudoz, Pierre; Galicher, Raphaël; Cao, Qing; Wang, Kai; Xing, Lujing; Boussaha, Faouzi; Firminy, Josiane; Bonafous, Marion
2018-04-16
The six-level phase mask (SLPM) can be used in a focal plane as an efficient coronagraph [Opt. Express 22, 1884 (2014)]. It has several advantages: high-contrast imaging in broadband with small inner working angle; easy fabrication at low cost by photolithography and reactive ion etching processes; easy implementation with no need of pupil apodization. We present in this paper the first laboratory results demonstrating the high performance of a SLPM with an unobscured pupil. The on-axis attenuation reaches 2 × 10 -5 at λ = 800 nm and is better than 10 -4 over a 10% spectral bandwidth and better than 10 -3 over a 20% bandwidth. Finally, the detection of a planet can be achieved down to 1 λ/D.
Teaching Fraunhofer diffraction via experimental and simulated images in the laboratory
NASA Astrophysics Data System (ADS)
Peinado, Alba; Vidal, Josep; Escalera, Juan Carlos; Lizana, Angel; Campos, Juan; Yzuel, Maria
2012-10-01
Diffraction is an important phenomenon introduced to Physics university students in a subject of Fundamentals of Optics. In addition, in the Physics Degree syllabus of the Universitat Autònoma de Barcelona, there is an elective subject in Applied Optics. In this subject, diverse diffraction concepts are discussed in-depth from different points of view: theory, experiments in the laboratory and computing exercises. In this work, we have focused on the process of teaching Fraunhofer diffraction through laboratory training. Our approach involves students working in small groups. They visualize and acquire some important diffraction patterns with a CCD camera, such as those produced by a slit, a circular aperture or a grating. First, each group calibrates the CCD camera, that is to say, they obtain the relation between the distances in the diffraction plane in millimeters and in the computer screen in pixels. Afterwards, they measure the significant distances in the diffraction patterns and using the appropriate diffraction formalism, they calculate the size of the analyzed apertures. Concomitantly, students grasp the convolution theorem in the Fourier domain by analyzing the diffraction of 2-D gratings of elemental apertures. Finally, the learners use a specific software to simulate diffraction patterns of different apertures. They can control several parameters: shape, size and number of apertures, 1-D or 2-D gratings, wavelength, focal lens or pixel size.Therefore, the program allows them to reproduce the images obtained experimentally, and generate others by changingcertain parameters. This software has been created in our research group, and it is freely distributed to the students in order to help their learning of diffraction. We have observed that these hands on experiments help students to consolidate their theoretical knowledge of diffraction in a pedagogical and stimulating learning process.
Ludwig, Susann K J; Zhu, Hongying; Phillips, Stephen; Shiledar, Ashutosh; Feng, Steve; Tseng, Derek; van Ginkel, Leendert A; Nielen, Michel W F; Ozcan, Aydogan
2014-11-01
Current contaminant and residue monitoring throughout the food chain is based on sampling, transport, administration, and analysis in specialized control laboratories. This is a highly inefficient and costly process since typically more than 99% of the samples are found to be compliant. On-site simplified prescreening may provide a scenario in which only samples that are suspect are transported and further processed. Such a prescreening can be performed using a small attachment on a cellphone. To this end, a cellphone-based imaging platform for a microsphere fluorescence immunoassay that detects the presence of anti-recombinant bovine somatotropin (rbST) antibodies in milk extracts was developed. RbST administration to cows increases their milk production, but is illegal in the EU and a public health concern in the USA. The cellphone monitors the presence of anti-rbST antibodies (rbST biomarker), which are endogenously produced upon administration of rbST and excreted in milk. The rbST biomarker present in milk extracts was captured by rbST covalently coupled to paramagnetic microspheres and labeled by quantum dot (QD)-coupled detection antibodies. The emitted fluorescence light from these captured QDs was then imaged using the cellphone camera. Additionally, a dark-field image was taken in which all microspheres present were visible. The fluorescence and dark-field microimages were analyzed using a custom-developed Android application running on the same cellphone. With this setup, the microsphere fluorescence immunoassay and cellphone-based detection were successfully applied to milk sample extracts from rbST-treated and untreated cows. An 80% true-positive rate and 95% true-negative rate were achieved using this setup. Next, the cellphone-based detection platform was benchmarked against a newly developed planar imaging array alternative and found to be equally performing versus the much more sophisticated alternative. Using cellphone-based on-site analysis in future residue monitoring can limit the number of samples for laboratory analysis already at an early stage. Therewith, the entire monitoring process can become much more efficient and economical.
NASA Astrophysics Data System (ADS)
Bergmann, Helmar; Dobrozemsky, Georg; Minear, Gregory; Nicoletti, Rudolf; Samal, Martin
2005-05-01
An inter-laboratory comparison study was conducted to assess the image quality of PET scanners in Austria. The survey included both dedicated PET scanners (D-PET, n = 8) and coincidence cameras (GC-PET, n = 7). Measurement of image quality was based on the NEMA (National Electrical Manufacturers Association) NU 2-2001 protocol and the IEC (International Electrotechnical Commission) body phantom. The latter contains six fillable spheres ranging in diameter from 37 mm down to 10 mm and a 'lung' insert. The two largest lesions L1-2 simulate cold lesions, the four smaller ones (L3-6) are filled with 18F and activity concentration ratios relative to background of 8:1 and 4:1, respectively. Acquisition and reconstruction in the study employed the participating institutes' standard oncological processing protocol. Calculation of contrast of the spheres was performed with a fully automated procedure. Contrast quality indices (CQIs) reflecting global performance were obtained by summing individual contrast values. Other image quality parameters calculated according to the NEMA protocol were background variability and relative error for correction of attenuation and scatter. Contrast values obtained were 61 ± 16 and 37 ± 14 for L1 (per cent contrast ± SD for D-PET and GC-PET, respectively), 57 ± 16 and 29 ± 16 for L2, 46 ± 10 and 26 ± 6.3 for L3, 37 ± 10 and 15 ± 4.3 for L4, 26 ± 11.5 and 6.1 ± 2.5 for L5, 14 ± 7.1 and 2.6 ± 2.6 for L6, with D-PET systems consistently being superior to GC-PET systems. CQIs permitted ranking of the scanners, also demonstrating a clear distinction between D-PET and GC-PET systems. Background variability was largest for GC-PET systems; the relative error of attenuation and scatter correction was significantly correlated with image quality for D-PET systems only. The study demonstrated considerable differences in image quality not only between GC-PET and D-PET systems but also between individual D-PET systems with possible consequences for clinical interpretation of images and measurement of quantitative indices such as the standardized uptake value. The study provided valuable feedback to the participants as well as baseline data for improving interchangeability of PET images and of quantitative indices between different laboratories.
Pre-Hardware Optimization and Implementation Of Fast Optics Closed Control Loop Algorithms
NASA Technical Reports Server (NTRS)
Kizhner, Semion; Lyon, Richard G.; Herman, Jay R.; Abuhassan, Nader
2004-01-01
One of the main heritage tools used in scientific and engineering data spectrum analysis is the Fourier Integral Transform and its high performance digital equivalent - the Fast Fourier Transform (FFT). The FFT is particularly useful in two-dimensional (2-D) image processing (FFT2) within optical systems control. However, timing constraints of a fast optics closed control loop would require a supercomputer to run the software implementation of the FFT2 and its inverse, as well as other image processing representative algorithm, such as numerical image folding and fringe feature extraction. A laboratory supercomputer is not always available even for ground operations and is not feasible for a night project. However, the computationally intensive algorithms still warrant alternative implementation using reconfigurable computing technologies (RC) such as Digital Signal Processors (DSP) and Field Programmable Gate Arrays (FPGA), which provide low cost compact super-computing capabilities. We present a new RC hardware implementation and utilization architecture that significantly reduces the computational complexity of a few basic image-processing algorithm, such as FFT2, image folding and phase diversity for the NASA Solar Viewing Interferometer Prototype (SVIP) using a cluster of DSPs and FPGAs. The DSP cluster utilization architecture also assures avoidance of a single point of failure, while using commercially available hardware. This, combined with the control algorithms pre-hardware optimization, or the first time allows construction of image-based 800 Hertz (Hz) optics closed control loops on-board a spacecraft, based on the SVIP ground instrument. That spacecraft is the proposed Earth Atmosphere Solar Occultation Imager (EASI) to study greenhouse gases CO2, C2H, H2O, O3, O2, N2O from Lagrange-2 point in space. This paper provides an advanced insight into a new type of science capabilities for future space exploration missions based on on-board image processing for control and for robotics missions using vision sensors. It presents a top-level description of technologies required for the design and construction of SVIP and EASI and to advance the spatial-spectral imaging and large-scale space interferometry science and engineering.
Control code for laboratory adaptive optics teaching system
NASA Astrophysics Data System (ADS)
Jin, Moonseob; Luder, Ryan; Sanchez, Lucas; Hart, Michael
2017-09-01
By sensing and compensating wavefront aberration, adaptive optics (AO) systems have proven themselves crucial in large astronomical telescopes, retinal imaging, and holographic coherent imaging. Commercial AO systems for laboratory use are now available in the market. One such is the ThorLabs AO kit built around a Boston Micromachines deformable mirror. However, there are limitations in applying these systems to research and pedagogical projects since the software is written with limited flexibility. In this paper, we describe a MATLAB-based software suite to interface with the ThorLabs AO kit by using the MATLAB Engine API and Visual Studio. The software is designed to offer complete access to the wavefront sensor data, through the various levels of processing, to the command signals to the deformable mirror and fast steering mirror. In this way, through a MATLAB GUI, an operator can experiment with every aspect of the AO system's functioning. This is particularly valuable for tests of new control algorithms as well as to support student engagement in an academic environment. We plan to make the code freely available to the community.
SAFER vehicle inspection: a multimodal robotic sensing platform
NASA Astrophysics Data System (ADS)
Page, David L.; Fougerolle, Yohan; Koschan, Andreas F.; Gribok, Andrei; Abidi, Mongi A.; Gorsich, David J.; Gerhart, Grant R.
2004-09-01
The current threats to U.S. security both military and civilian have led to an increased interest in the development of technologies to safeguard national facilities such as military bases, federal buildings, nuclear power plants, and national laboratories. As a result, the Imaging, Robotics, and Intelligent Systems (IRIS) Laboratory at The University of Tennessee (UT) has established a research consortium, known as SAFER (Security Automation and Future Electromotive Robotics), to develop, test, and deploy sensing and imaging systems for unmanned ground vehicles (UGV). The targeted missions for these UGV systems include -- but are not limited to --under vehicle threat assessment, stand-off check-point inspections, scout surveillance, intruder detection, obstacle-breach situations, and render-safe scenarios. This paper presents a general overview of the SAFER project. Beyond this general overview, we further focus on a specific problem where we collect 3D range scans of under vehicle carriages. These scans require appropriate segmentation and representation algorithms to facilitate the vehicle inspection process. We discuss the theory for these algorithms and present results from applying them to actual vehicle scans.
Soil transference patterns on bras: Image processing and laboratory dragging experiments.
Murray, Kathleen R; Fitzpatrick, Robert W; Bottrill, Ralph S; Berry, Ron; Kobus, Hilton
2016-01-01
In a recent Australian homicide, trace soil on the victim's clothing suggested she was initially attacked in her front yard and not the park where her body was buried. However the important issue that emerged during the trial was how soil was transferred to her clothing. This became the catalyst for designing a range of soil transference experiments (STEs) to study, recognise and classify soil patterns transferred onto fabric when a body is dragged across a soil surface. Soil deposits of interest in this murder were on the victim's bra and this paper reports the results of anthropogenic soil transfer to bra-cups and straps caused by dragging. Transfer patterns were recorded by digital photography and photomicroscopy. Eight soil transfer patterns on fabric, specific to dragging as the transfer method, appeared consistently throughout the STEs. The distinctive soil patterns were largely dependent on a wide range of soil features that were measured and identified for each soil tested using X-ray Diffraction and Non-Dispersive Infra-Red analysis. Digital photographs of soil transfer patterns on fabric were analysed using image processing software to provide a soil object-oriented classification of all soil objects with a diameter of 2 pixels and above transferred. Although soil transfer patterns were easily identifiable by naked-eye alone, image processing software provided objective numerical data to support this traditional (but subjective) interpretation. Image software soil colour analysis assigned a range of Munsell colours to identify and compare trace soil on fabric to other trace soil evidence from the same location; without requiring a spectrophotometer. Trace soil from the same location was identified by linking soils with similar dominant and sub-dominant Munsell colour peaks. Image processing numerical data on the quantity of soil transferred to fabric, enabled a relationship to be discovered between soil type, clay mineralogy (smectite), particle size and soil moisture content that would not have been possible otherwise. Soil type (e.g. Anthropogenic, gravelly sandy loam soil or Natural, organic-rich soil), clay mineralogy (smectite) and soil moisture content were the greatest influencing factors in all the dragging soil transference tests (both naked eye and measured properties) to explain the eight categories of soil transference patterns recorded. This study was intended to develop a method for dragging soil transference laboratory experiments and create a baseline of preliminary soil type/property knowledge. Results confirm the need to better understand soil behaviour and properties of clothing fabrics by further testing of a wider range of soil types and clay mineral properties. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.
Descent Stage of Mars Science Laboratory During Assembly
2008-11-19
This image from early October 2008 shows personnel working on the descent stage of NASA Mars Science Laboratory inside the Spacecraft Assembly Facility at NASA Jet Propulsion Laboratory, Pasadena, Calif.
Simulation of the planetary interior differentiation processes in the laboratory.
Fei, Yingwei
2013-11-15
A planetary interior is under high-pressure and high-temperature conditions and it has a layered structure. There are two important processes that led to that layered structure, (1) percolation of liquid metal in a solid silicate matrix by planet differentiation, and (2) inner core crystallization by subsequent planet cooling. We conduct high-pressure and high-temperature experiments to simulate both processes in the laboratory. Formation of percolative planetary core depends on the efficiency of melt percolation, which is controlled by the dihedral (wetting) angle. The percolation simulation includes heating the sample at high pressure to a target temperature at which iron-sulfur alloy is molten while the silicate remains solid, and then determining the true dihedral angle to evaluate the style of liquid migration in a crystalline matrix by 3D visualization. The 3D volume rendering is achieved by slicing the recovered sample with a focused ion beam (FIB) and taking SEM image of each slice with a FIB/SEM crossbeam instrument. The second set of experiments is designed to understand the inner core crystallization and element distribution between the liquid outer core and solid inner core by determining the melting temperature and element partitioning at high pressure. The melting experiments are conducted in the multi-anvil apparatus up to 27 GPa and extended to higher pressure in the diamond-anvil cell with laser-heating. We have developed techniques to recover small heated samples by precision FIB milling and obtain high-resolution images of the laser-heated spot that show melting texture at high pressure. By analyzing the chemical compositions of the coexisting liquid and solid phases, we precisely determine the liquidus curve, providing necessary data to understand the inner core crystallization process.
Simulation of the Planetary Interior Differentiation Processes in the Laboratory
Fei, Yingwei
2013-01-01
A planetary interior is under high-pressure and high-temperature conditions and it has a layered structure. There are two important processes that led to that layered structure, (1) percolation of liquid metal in a solid silicate matrix by planet differentiation, and (2) inner core crystallization by subsequent planet cooling. We conduct high-pressure and high-temperature experiments to simulate both processes in the laboratory. Formation of percolative planetary core depends on the efficiency of melt percolation, which is controlled by the dihedral (wetting) angle. The percolation simulation includes heating the sample at high pressure to a target temperature at which iron-sulfur alloy is molten while the silicate remains solid, and then determining the true dihedral angle to evaluate the style of liquid migration in a crystalline matrix by 3D visualization. The 3D volume rendering is achieved by slicing the recovered sample with a focused ion beam (FIB) and taking SEM image of each slice with a FIB/SEM crossbeam instrument. The second set of experiments is designed to understand the inner core crystallization and element distribution between the liquid outer core and solid inner core by determining the melting temperature and element partitioning at high pressure. The melting experiments are conducted in the multi-anvil apparatus up to 27 GPa and extended to higher pressure in the diamond-anvil cell with laser-heating. We have developed techniques to recover small heated samples by precision FIB milling and obtain high-resolution images of the laser-heated spot that show melting texture at high pressure. By analyzing the chemical compositions of the coexisting liquid and solid phases, we precisely determine the liquidus curve, providing necessary data to understand the inner core crystallization process. PMID:24326245
NASA Astrophysics Data System (ADS)
Irshad, Humayun; Oh, Eun-Yeong; Schmolze, Daniel; Quintana, Liza M.; Collins, Laura; Tamimi, Rulla M.; Beck, Andrew H.
2017-02-01
The assessment of protein expression in immunohistochemistry (IHC) images provides important diagnostic, prognostic and predictive information for guiding cancer diagnosis and therapy. Manual scoring of IHC images represents a logistical challenge, as the process is labor intensive and time consuming. Since the last decade, computational methods have been developed to enable the application of quantitative methods for the analysis and interpretation of protein expression in IHC images. These methods have not yet replaced manual scoring for the assessment of IHC in the majority of diagnostic laboratories and in many large-scale research studies. An alternative approach is crowdsourcing the quantification of IHC images to an undefined crowd. The aim of this study is to quantify IHC images for labeling of ER status with two different crowdsourcing approaches, image-labeling and nuclei-labeling, and compare their performance with automated methods. Crowdsourcing- derived scores obtained greater concordance with the pathologist interpretations for both image-labeling and nuclei-labeling tasks (83% and 87%), as compared to the pathologist concordance achieved by the automated method (81%) on 5,338 TMA images from 1,853 breast cancer patients. This analysis shows that crowdsourcing the scoring of protein expression in IHC images is a promising new approach for large scale cancer molecular pathology studies.
Use of artificial intelligence in analytical systems for the clinical laboratory
Truchaud, Alain; Ozawa, Kyoichi; Pardue, Harry; Schnipelsky, Paul
1995-01-01
The incorporation of information-processing technology into analytical systems in the form of standard computing software has recently been advanced by the introduction of artificial intelligence (AI), both as expert systems and as neural networks. This paper considers the role of software in system operation, control and automation, and attempts to define intelligence. AI is characterized by its ability to deal with incomplete and imprecise information and to accumulate knowledge. Expert systems, building on standard computing techniques, depend heavily on the domain experts and knowledge engineers that have programmed them to represent the real world. Neural networks are intended to emulate the pattern-recognition and parallel processing capabilities of the human brain and are taught rather than programmed. The future may lie in a combination of the recognition ability of the neural network and the rationalization capability of the expert system. In the second part of the paper, examples are given of applications of AI in stand-alone systems for knowledge engineering and medical diagnosis and in embedded systems for failure detection, image analysis, user interfacing, natural language processing, robotics and machine learning, as related to clinical laboratories. It is concluded that AI constitutes a collective form of intellectual propery, and that there is a need for better documentation, evaluation and regulation of the systems already being used in clinical laboratories. PMID:18924784
Automatic Docking System Sensor Design, Test, and Mission Performance
NASA Technical Reports Server (NTRS)
Jackson, John L.; Howard, Richard T.; Cole, Helen J.
1998-01-01
The Video Guidance Sensor is a key element of an automatic rendezvous and docking program administered by NASA that was flown on STS-87 in November of 1997. The system used laser illumination of a passive target in the field of view of an on-board camera and processed the video image to determine the relative position and attitude between the target and the sensor. Comparisons of mission results with theoretical models and laboratory measurements will be discussed.
The Tissue Analysis Core within the AIDS and Cancer Virus Program will process, embed and perform microtomy on fixed tissue samples presented in ethanol. HIV/SIVin situhybridization for detection of vRNA and vDNA will be performed using the next-gene
1998-01-25
CT scans of the spcimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. These views depict vertical slices from side to middle of a flight specimen. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. Credit: Los Alamos National Laboratory and the University of Colorado at Boulder.
1998-01-25
CT scans of the spcimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. This view depict horizontal slices from top to bottom of a flight specimen. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. Credit: Los Alamos National Laboratory and the University of Colorado at Boulder.
1998-01-25
CT scans of the spcimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. This view is made from a series of horizontal slices. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. Credit: Los Alamos National Laboratory and the University of Colorado at Boulder.
1998-01-25
CT scans of the specimens on STS-79 reveal internal cone-shaped features and radial patterns not seen in specimens processed on the ground. The lighter areas are the densest in these images. CT scans produced richly detailed images allowing scientists to build 3D models of the interior of the specimens that can be compared with microscopic examination of thin slices. This view is made from three orthogonal slices. Sand and soil grains have faces that can cause friction as they roll and slide against each other, or even cause sticking and form small voids between grains. This complex behavior can cause soil to behave like a liquid under certain conditions such as earthquakes or when powders are handled in industrial processes. Mechanics of Granular Materials (MGM) experiments aboard the Space Shuttle use the microgravity of space to simulate this behavior under conditions that carnot be achieved in laboratory tests on Earth. MGM is shedding light on the behavior of fine-grain materials under low effective stresses. Applications include earthquake engineering, granular flow technologies (such as powder feed systems for pharmaceuticals and fertilizers), and terrestrial and planetary geology. Nine MGM specimens have flown on two Space Shuttle flights. Another three are scheduled to fly on STS-107. The principal investigator is Stein Sture of the University of Colorado at Boulder. (Credit: Los Alamos National Laboratory and the University of Colorado at Boulder).
ERIC Educational Resources Information Center
Weeks, Andrea; Bachman. Beverly; Josway, Sarah; North, Brittany; Tsuchiya, Mirian T.N.
2013-01-01
Microscopy and precise observation are essential skills that are challenging to teach effectively to large numbers of undergraduate biology students. We implemented student-driven digital imaging assignments for microscopy in a large enrollment laboratory for organismal biology. We detail how we promoted student engagement with the material and…
NASA Technical Reports Server (NTRS)
2008-01-01
This image was acquired by NASA's Phoenix Mars Lander's Surface Stereo Imager on Sol 43, the 43rd Martian day after landing (July 8, 2008). This image shows the trench informally called 'Snow White.' Two samples were delivered to the Wet Chemistry Laboratory, which is part of Phoenix's Microscopy, Electrochemistry, and Conductivity Analyzer (MECA). The first sample was taken from the surface area just left of the trench and informally named 'Rosy Red.' It was delivered to the Wet Chemistry Laboratory on Sol 30 (June 25, 2008). The second sample, informally named 'Sorceress,' was taken from the center of the 'Snow White' trench and delivered to the Wet Chemistry Laboratory on Sol 41 (July 6, 2008). The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.Determination of Steering Wheel Angles during CAR Alignment by Image Analysis Methods
NASA Astrophysics Data System (ADS)
Mueller, M.; Voegtle, T.
2016-06-01
Optical systems for automatic visual inspections are of increasing importance in the field of automation in the industrial domain. A new application is the determination of steering wheel angles during wheel track setting of the final inspection of car manufacturing. The camera has to be positioned outside the car to avoid interruptions of the processes and therefore, oblique images of the steering wheel must be acquired. Three different approaches of computer vision are considered in this paper, i.e. a 2D shape-based matching (by means of a plane to plane rectification of the oblique images and detection of a shape model with a particular rotation), a 3D shape-based matching approach (by means of a series of different perspectives of the spatial shape of the steering wheel derived from a CAD design model) and a point-to-point matching (by means of the extraction of significant elements (e.g. multifunctional buttons) of a steering wheel and a pairwise connection of these points to straight lines). The HALCON system (HALCON, 2016) was used for all software developments and necessary adaptions. As reference a mechanical balance with an accuracy of 0.1° was used. The quality assessment was based on two different approaches, a laboratory test and a test during production process. In the laboratory a standard deviation of ±0.035° (2D shape-based matching), ±0.12° (3D approach) and ±0.029° (point-to-point matching) could be obtained. The field test of 291 measurements (27 cars with varying poses and angles of the steering wheel) results in a detection rate of 100% and ±0.48° (2D matching) and ±0.24° (point-to-point matching). Both methods also fulfil the request of real time processing (three measurements per second).
Pollen structure visualization using high-resolution laboratory-based hard X-ray tomography
DOE Office of Scientific and Technical Information (OSTI.GOV)
Li, Qiong; Gluch, Jürgen; Krüger, Peter
A laboratory-based X-ray microscope is used to investigate the 3D structure of unstained whole pollen grains. For the first time, high-resolution laboratory-based hard X-ray microscopy is applied to study pollen grains. Based on the efficient acquisition of statistically relevant information-rich images using Zernike phase contrast, both surface- and internal structures of pine pollen - including exine, intine and cellular structures - are clearly visualized. The specific volumes of these structures are calculated from the tomographic data. The systematic three-dimensional study of pollen grains provides morphological and structural information about taxonomic characters that are essential in palynology. Such studies have amore » direct impact on disciplines such as forestry, agriculture, horticulture, plant breeding and biodiversity. - Highlights: • The unstained whole pine pollen was visualized by high-resolution laboratory-based HXRM for the first time. • The comparison study of pollen grains by LM, SEM and high-resolution laboratory-based HXRM. • Phase contrast imaging provides significantly higher contrast of the raw images compared to absorption contrast imaging. • Surface and internal structure of the pine pollen including exine, intine and cellular structures are clearly visualized. • 3D volume data of unstained whole pollen grains are acquired and the specific volumes of the different layer are calculated.« less
Properties of small-scale interfacial turbulence from a novel thermography based approach
NASA Astrophysics Data System (ADS)
Schnieders, Jana; Garbe, Christoph
2013-04-01
Oceans cover nearly two thirds of the earth's surface and exchange processes between the Atmosphere and the Ocean are of fundamental environmental importance. At the air-sea interface, complex interaction processes take place on a multitude of scales. Turbulence plays a key role in the coupling of momentum, heat and mass transfer [2]. Here we use high resolution infrared imagery to visualize near surface aqueous turbulence. Thermographic data is analized from a range of laboratory facilities and experimental conditions with wind speeds ranging from 1ms-1 to 7ms-1 and various surface conditions. The surface heat pattern is formed by distinct structures on two scales - small-scale short lived structures termed fish scales and larger scale cold streaks that are consistent with the footprints of Langmuir Circulations. There are two key characteristics of the observed surface heat patterns: (1) The surface heat patterns show characteristic features of scales. (2) The structure of these patterns change with increasing wind stress and surface conditions. We present a new image processing based approach to the analysis of the spacing of cold streaks based on a machine learning approach [4, 1] to classify the thermal footprints of near surface turbulence. Our random forest classifier is based on classical features in image processing such as gray value gradients and edge detecting features. The result is a pixel-wise classification of the surface heat pattern with a subsequent analysis of the streak spacing. This approach has been presented in [3] and can be applied to a wide range of experimental data. In spite of entirely different boundary conditions, the spacing of turbulent cells near the air-water interface seems to match the expected turbulent cell size for flow near a no-slip wall. The analysis of the spacing of cold streaks shows consistent behavior in a range of laboratory facilities when expressed as a function of water sided friction velocity, u*. The scales systematically decrease until a point of saturation at u* = 0.7 cm/s. Results suggest a saturation in the tangential stress, anticipating that similar behavior will be observed in the open ocean. A comparison with studies of small-scale Langmuir circulations and Langmuir numbers shows that thermal footprints in infrared images are consistent with Langmuir circulations and depend strongly on wind wave conditions. Our approach is not limited to laboratory measurments. In the near future, we will deploy it on in-situ measurements and verify our findings in these more challenging conditions. References [1] L. Breimann. Random forests. Machine Learning, 45:5-32, 2001. [2] S. P. McKenna and W. R. McGillis. The role of free-surface turbulence and surfactants in air-water gas transfer. Int. J. Heat Mass Transfer, 47:539-553, 2004. [3] J Schnieders, C. S. Garbe, W.L. Peirson, and C. J. Zappa. Analyzing the footprints of near surface aqueous turbulence - an image processing based approach. Journal of Geophysical Research-Oceans, 2013. [4] Christoph Sommer, Christoph Straehle, Ullrich Koethe, and Fred A. Hamprecht. ilastik: Interactive learning and segmentation toolkit. In 8th IEEE International Symposium on Biomedical Imaging (ISBI 2011), 2011. [5] W.-T. Tsai, S.-M. Chen, and C.-H. Moeng. A numerical study on the evolution and structure of a stress-driven free-surface turbulent shear flow. J. Fluid Mech., 545:163-192, 2005.
Ground Optical Signal Processing Architecture for Contributing SSA Space Based Sensor Data
NASA Astrophysics Data System (ADS)
Koblick, D.; Klug, M.; Goldsmith, A.; Flewelling, B.; Jah, M.; Shanks, J.; Piña, R.
2014-09-01
The main objective of the DARPA program Orbit Outlook (O^2) is to improve the metric tracking and detection performance of the Space Situational Network (SSN) by adding a diverse low-cost network of contributing sensors to the Space Situational Awareness (SSA) mission. In order to accomplish this objective, not only must a sensor be in constant communication with a planning and scheduling system to process tasking requests, there must be an underlying framework to provide useful data products, such as angles only measurements. Existing optical signal processing implementations such as the Optical Processing Architecture at Lincoln (OPAL) are capable of converting mission data collections to angles only observations, but may be difficult for many users to obtain, support, and customize for low-cost missions and demonstration programs. The Ground Optical Signal Processing Architecture (GOSPA) will ingest raw imagery and telemetry data from a space based electro optical sensor and perform a background removal process to remove anomalous pixels, interpolate over bad pixels, and dominant temporal noise. After background removal, the streak end points and target centroids are located using a corner detection algorithm developed by Air Force Research Laboratory. These identified streak locations are then fused with the corresponding spacecraft telemetry data to determine the Right Ascension and Declination measurements with respect to time. To demonstrate the performance of GOSPA, non-rate tracking collections against a satellite in Geosynchronous Orbit are simulated from a visible optical imaging sensor in a polar Low Earth Orbit. Stars, noise and bad pixels are added to the simulated images based on look angles and sensor parameters. These collections are run through the GOSPA framework to provide angles- only measurements to the Air Force Research Laboratory Constrained Admissible Region Multiple Hypothesis Filter (CAR-MHF) in which an Initial Orbit Determination is performed and compared to truth data.
Romm, H; Ainsbury, E; Bajinskis, A; Barnard, S; Barquinero, J F; Barrios, L; Beinke, C; Puig-Casanovas, R; Deperas-Kaminska, M; Gregoire, E; Oestreicher, U; Lindholm, C; Moquet, J; Rothkamm, K; Sommer, S; Thierens, H; Vral, A; Vandersickel, V; Wojcik, A
2014-05-01
In the case of a large scale radiation accident high throughput methods of biological dosimetry for population triage are needed to identify individuals requiring clinical treatment. The dicentric assay performed in web-based scoring mode may be a very suitable technique. Within the MULTIBIODOSE EU FP7 project a network is being established of 8 laboratories with expertise in dose estimations based on the dicentric assay. Here, the manual dicentric assay was tested in a web-based scoring mode. More than 23,000 high resolution images of metaphase spreads (only first mitosis) were captured by four laboratories and established as image galleries on the internet (cloud). The galleries included images of a complete dose effect curve (0-5.0 Gy) and three types of irradiation scenarios simulating acute whole body, partial body and protracted exposure. The blood samples had been irradiated in vitro with gamma rays at the University of Ghent, Belgium. Two laboratories provided image galleries from Fluorescence plus Giemsa stained slides (3 h colcemid) and the image galleries from the other two laboratories contained images from Giemsa stained preparations (24 h colcemid). Each of the 8 participating laboratories analysed 3 dose points of the dose effect curve (scoring 100 cells for each point) and 3 unknown dose points (50 cells) for each of the 3 simulated irradiation scenarios. At first all analyses were performed in a QuickScan Mode without scoring individual chromosomes, followed by conventional scoring (only complete cells, 46 centromeres). The calibration curves obtained using these two scoring methods were very similar, with no significant difference in the linear-quadratic curve coefficients. Analysis of variance showed a significant effect of dose on the yield of dicentrics, but no significant effect of the laboratories, different methods of slide preparation or different incubation times used for colcemid. The results obtained to date within the MULTIBIODOSE project by a network of 8 collaborating laboratories throughout Europe are very promising. The dicentric assay in the web based scoring mode as a high throughput scoring strategy is a useful application for biodosimetry in the case of a large scale radiation accident.
3D Printing and Digital Rock Physics for the Geosciences
NASA Astrophysics Data System (ADS)
Martinez, M. J.; Yoon, H.; Dewers, T. A.
2014-12-01
Imaging techniques for the analysis of porous structures have revolutionized our ability to quantitatively characterize geomaterials. For example, digital representations of rock from CT images and physics modeling based on these pore structures provide the opportunity to further advance our quantitative understanding of fluid flow, geomechanics, and geochemistry, and the emergence of coupled behaviors. Additive manufacturing, commonly known as 3D printing, has revolutionized production of custom parts, to the point where parts might be cheaper to print than to make by traditional means in a plant and ship. Some key benefits of additive manufacturing include short lead times, complex shapes, parts on demand, zero required inventory and less material waste. Even subtractive processing, such as milling and etching, may be economized by additive manufacturing. For the geosciences, recent advances in 3D printing technology may be co-opted to print reproducible porous structures derived from CT-imaging of actual rocks for experimental testing. The use of 3D printed microstructure allows us to surmount typical problems associated with sample-to-sample heterogeneity that plague rock physics testing and to test material response independent from pore-structure variability. Together, imaging, digital rocks and 3D printing potentially enables a new workflow for understanding coupled geophysical processes in a real, but well-defined setting circumventing typical issues associated with reproducibility, enabling full characterization and thus connection of physical phenomena to structure. In this talk we will discuss the possibilities that the marriage of these technologies can bring to geosciences, including examples from our current research initiatives in developing constitutive laws for transport and geomechanics via digital rock physics. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.
Diagnosis and treatment of dementia: 2. Diagnosis
Feldman, Howard H.; Jacova, Claudia; Robillard, Alain; Garcia, Angeles; Chow, Tiffany; Borrie, Michael; Schipper, Hyman M.; Blair, Mervin; Kertesz, Andrew; Chertkow, Howard
2008-01-01
Background Dementia can now be accurately diagnosed through clinical evaluation, cognitive screening, basic laboratory evaluation and structural imaging. A large number of ancillary techniques are also available to aid in diagnosis, but their role in the armamentarium of family physicians remains controversial. In this article, we provide physicians with practical guidance on the diagnosis of dementia based on recommendations from the Third Canadian Consensus Conference on the Diagnosis and Treatment of Dementia, held in March 2006. Methods We developed evidence-based guidelines using systematic literature searches, with specific criteria for study selection and quality assessment, and a clear and transparent decision-making process. We selected studies published from January 1996 to December 2005 that pertained to key diagnostic issues in dementia. We graded the strength of evidence using the criteria of the Canadian Task Force on Preventive Health Care. Results Of the 1591 articles we identified on all aspects of dementia diagnosis, 1095 met our inclusion criteria; 620 were deemed to be of good or fair quality. From a synthesis of the evidence in these studies, we made 32 recommendations related to the diagnosis of dementia. There are clinical criteria for diagnosing most forms of dementia. A standard diagnostic evaluation can be performd by family physicians over multiple visits. It involves a clinical history (from patient and caregiver), a physical examination and brief cognitive testing. A list of core laboratory tests is recommended. Structural imaging with computed tomography or magnetic resonance imaging is recommended in selected cases to rule out treatable causes of dementia or to rule in cerebrovascular disease. There is insufficient evidence to recommend routine functional imaging, measurement of biomarkers or neuropsychologic testing. Interpretation The diagnosis of dementia remains clinically integrative based on history, physical examination and brief cognitive testing. A number of core laboratory tests are also recommended. Structural neuroimaging is advised in selected cases. Other diagnostic approaches, including functional neuroimaging, neuropsychological testing and measurement of biomarkers, have shown promise but are not yet recommended for routine use by family physicians. PMID:18362376